Psyllid ID: psy826

---

Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------33
Protein Sequence
TSGIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAIYVSVAEYILNDKTAAFDPPSIITKHLFGK
Secondary Structure (PSIPRED)
cccHHccccccccccccHHHHHHcccHHHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHcccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccEEEEcccccEEccccEEEEEEEccEEEEEEEEEEEEEccccccccccccHHHHcccc
Secondary Structure Prediction (SSPRO)
cccHHHHHHccccccccHHHHHHHHHccHHHHHHHHHHHHHccccccccHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHHcEEccccccccccccccccccccccccccEccccccccccEEEcccccccccccccccccccccccccccccccccHHccccccccccccccccccccEcccccEEEEcHHHccccccccccEEEcccccEEEEccccccccccccccccccccccccEccccEEEEccccccccccEEcccccEEEEccccEEEEcccHEHEHHHHHHHHHHEHHHHHcccccccccccccccHHHHccc
Coil and Loop (DISEMBL)
tsgiektakgnfaggdtawEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQhskakdsdlYTWLCINklkrccpvdhygadckpclgfpnvcfgngkckgngtrkgngqcvcnkeytgelcnecntgyfqsykdektilcskchascesgcstggpkgctkcksgwaadkdigcydinecsdenicsgnqfcvntegsyrcmqcdpscngchgdgpdmcEACAEGYKLQQNICIntqaksqntnenLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAIYVSVAEYIlndktaafdppsiitkhlfgk
Flexible Loop (DISEMBL)
tsgiektakgnfaggdtaweeeKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCesgcstggpkgCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAIYVSVAEYILNdktaafdppsiitkhlfgk
Low Complexity Region (SEG)
TSGIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNvfiasivgvvvaiyvsvaEYILNDKTAAFDPPSIITKHLFGK
Disordered region (IsUnstruct)
***********************QKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAIYVSVAEYILNDKTAAFDPPSIITK*****
Disordered Region (DISOPRED)
****EKT***NFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAIYVSVAEYILNDKTAAFDPPSIITKHLFG*
Disordered Region (DISEMBL)
TSGIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAIYVSVAEYILNDKTAAFDPPSIITKHLFGK
Disordered Region (DISPRO)
***************DTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAIYVSVAEYILNDK***FDPPSII****FGK
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiii
Transmembrane Helix (HMMTOP)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHiiiHHHHHHHHHHHHHHHHHooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHoooooHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Signal Peptide (SignalP NN Mode)
xxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxxx
Coiled Coils (COILS)
TSGIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAIYVSVAEYILNDKTAAFDPPSIITKHLFGK
Positional Conservation
no confident homologs detected

---

Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	329	2.2.26 [Sep-21-2011]
Q7SXF6	341	Cysteine-rich with EGF-li	yes	N/A	0.747	0.721	0.470	5e-59
Q5XH36	361	Cysteine-rich with EGF-li	N/A	N/A	0.750	0.684	0.459	5e-54
Q4V7M2	361	Cysteine-rich with EGF-li	N/A	N/A	0.747	0.681	0.445	7e-54
Q5EA46	420	Cysteine-rich with EGF-li	yes	N/A	0.747	0.585	0.429	1e-49
Q91XD7	420	Cysteine-rich with EGF-li	yes	N/A	0.747	0.585	0.425	1e-49
Q4V7F2	420	Cysteine-rich with EGF-li	yes	N/A	0.747	0.585	0.421	3e-49
Q96HD1	420	Cysteine-rich with EGF-li	yes	N/A	0.747	0.585	0.425	3e-49
Q6UXH1	353	Cysteine-rich with EGF-li	no	N/A	0.811	0.756	0.408	3e-48
Q60438	348	Cysteine-rich with EGF-li	no	N/A	0.823	0.778	0.392	7e-46
Q2KIT5	351	Cysteine-rich with EGF-li	no	N/A	0.811	0.760	0.397	5e-45

>sp|Q7SXF6|CREL2_DANRE Cysteine-rich with EGF-like domain protein 2 OS=Danio rerio GN=creld2 PE=2 SV=2

 Score =  228 bits (581), Expect = 5e-59,   Method: Compositional matrix adjust.
 Identities = 120/255 (47%), Positives = 159/255 (62%), Gaps = 9/255 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+EKTAK NF GG+TAWEE K   Y  SE+RL EI E +C + S F  +C +   + E  
Sbjct: 44  GLEKTAKQNFGGGNTAWEERKLSKYETSEIRLTEILEGLC-QSSNF--ECSHMLEENEEH 100

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPN-VCFGNGKCKGN 121
           +E WWFK    K K  DL+ W CI  +K CCP   +G DC  C+G  +  C GNGKC G+
Sbjct: 101 LEAWWFK---RKTKHPDLFKWFCIETIKVCCPKGSFGPDCNTCIGGADRPCHGNGKCDGD 157

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTR GNG+C C++ Y GE C +C+ GYF S +++   LC +CH SC  GCS G  + C +
Sbjct: 158 GTRAGNGKCSCDEGYDGEFCLDCSDGYFNSLRNDTFFLCKECHESC-VGCSGGTNQHCKE 216

Query: 182 CKSGWAADKDIGCYDINEC-SDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           C++GW  D++  C DINEC  D   CS +Q+C+NT+GS+ C  CD  C GC GDG   C 
Sbjct: 217 CRNGWVKDQEGSCIDINECIKDPAPCSDDQYCLNTDGSFSCKACDIRCTGCKGDGASSCL 276

Query: 241 ACAEGYKLQQNICIN 255
            CA+GYK ++  C +
Sbjct: 277 NCADGYKDEEGTCTD 291

Possible role in neuronal acetylcholine receptor transport.
Danio rerio (taxid: 7955)

>sp|Q5XH36|CRE2A_XENLA Cysteine-rich with EGF-like domain protein 2-A OS=Xenopus laevis GN=creld2-a PE=2 SV=1

 Score =  211 bits (538), Expect = 5e-54,   Method: Compositional matrix adjust.
 Identities = 118/257 (45%), Positives = 158/257 (61%), Gaps = 10/257 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+E TAK NF GG+TAWEE+    Y  SE+RL+EI E +C + S F  +C++   + E +
Sbjct: 42  GLENTAKKNFGGGNTAWEEKTLSKYESSEIRLVEIIENLC-DSSDF--ECNHMVEEHEEQ 98

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
           IE+WWFK+   K K  DL  W CI  +K CCP   YG DC  CLG     C GNG C G+
Sbjct: 99  IEKWWFKM---KKKYPDLLKWFCIETIKVCCPPGTYGPDCLACLGGSERPCHGNGFCNGD 155

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTR G+G C C  EYTG  C EC   YF S +++   LC+ C+ +C++ C     + C +
Sbjct: 156 GTRSGDGLCRCEAEYTGPFCLECADEYFSSERNDTYSLCTACNQACKT-CDGPSNEDCKE 214

Query: 182 CKSGWAADKDIGCYDINEC-SDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           CK+GW  D D  C D+NEC S+E+ C  +Q+C+NTEGS+ C +CD SC GC G+GP+ C+
Sbjct: 215 CKNGWIKD-DGKCVDLNECASEESPCKDSQYCLNTEGSFLCKECDGSCLGCSGEGPENCK 273

Query: 241 ACAEGYKLQQNICINTQ 257
            CA GY L    C +  
Sbjct: 274 DCATGYVLLAEKCTDVD 290

Possible role in neuronal acetylcholine receptor transport.

Xenopus laevis (taxid: 8355)

>sp|Q4V7M2|CRE2B_XENLA Cysteine-rich with EGF-like domain protein 2-B OS=Xenopus laevis GN=creld2-b PE=2 SV=1

 Score =  211 bits (536), Expect = 7e-54,   Method: Compositional matrix adjust.
 Identities = 114/256 (44%), Positives = 160/256 (62%), Gaps = 10/256 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+E TAK NF GG+TAWEE+    Y  SE+RL+EI E +C + S F  +C++   + E +
Sbjct: 42  GLENTAKKNFGGGNTAWEEKTLSKYESSEIRLVEIIENIC-DSSDF--ECNHMVEEHEEQ 98

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
           IE+WWFK+   K K  DL  W CI  +K CCP   YG DC  CLG     C GNG C G+
Sbjct: 99  IEKWWFKM---KQKYPDLLKWFCIEAIKVCCPSGSYGPDCLACLGGSERPCHGNGFCSGD 155

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTR G+G C C  EYTG  C EC+ GY+ S +++   +C  C+ +C++ C+    + C +
Sbjct: 156 GTRSGDGSCRCKAEYTGSFCLECSDGYYSSERNDTHAVCIACNQACKT-CNGPSNEDCKE 214

Query: 182 CKSGWAADKDIGCYDINEC-SDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           C +GW  D D  C D+NEC S+E+ C  +Q+C+NTEGS+ C +CD SC+GC G+GP+ C+
Sbjct: 215 CNNGWVKD-DGKCVDLNECASEESPCKDSQYCLNTEGSFLCKECDGSCSGCSGEGPESCK 273

Query: 241 ACAEGYKLQQNICINT 256
            CA G+ +    C + 
Sbjct: 274 DCATGFVMLSGKCTDV 289

Possible role in neuronal acetylcholine receptor transport.

Xenopus laevis (taxid: 8355)

>sp|Q5EA46|CREL1_BOVIN Cysteine-rich with EGF-like domain protein 1 OS=Bos taurus GN=CRELD1 PE=2 SV=1

 Score =  197 bits (500), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 110/256 (42%), Positives = 145/256 (56%), Gaps = 10/256 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+E+T + NF GG+TAWEEEK   Y  SE RL+E+ E +CS+ S F  +CH      E  
Sbjct: 59  GLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSK-SDF--ECHRLLELSEEL 115

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
           +E WWF   H + +  DL+ WLC + LK CCP   +G  C PC G     C G G C+G 
Sbjct: 116 VESWWF---HKQQEAPDLFQWLCSDSLKLCCPSGTFGPSCLPCPGGAERPCGGYGHCEGE 172

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTR G+G C C   Y GE C +C  GYF++ ++   ++CS C   C   CS      C +
Sbjct: 173 GTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNASHLVCSACFGPCAR-CSGPEESHCLQ 231

Query: 182 CKSGWAADKDIGCYDINECSDENI-CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           CK GWA    + C DI+EC  E   C  +QFCVNTEGSY C  C  +C GC G GP  C+
Sbjct: 232 CKKGWAL-HHLKCVDIDECGTERASCGADQFCVNTEGSYECRDCAKACLGCMGAGPGRCK 290

Query: 241 ACAEGYKLQQNICINT 256
            C+ GY+   + C++ 
Sbjct: 291 KCSPGYQQVGSKCLDV 306

Bos taurus (taxid: 9913)

>sp|Q91XD7|CREL1_MOUSE Cysteine-rich with EGF-like domain protein 1 OS=Mus musculus GN=Creld1 PE=2 SV=1

 Score =  197 bits (500), Expect = 1e-49,   Method: Compositional matrix adjust.
 Identities = 109/256 (42%), Positives = 146/256 (57%), Gaps = 10/256 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+E+T + NF GG+TAWEEEK   Y  SE RL+E+ E +CS  S F  +CH      E  
Sbjct: 59  GLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSR-SDF--ECHRLLELSEEL 115

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
           +E WWF   H + +  DL+ WLC + LK CCP   +G  C PC G     C G G+C+G 
Sbjct: 116 VENWWF---HRQQEAPDLFQWLCSDSLKLCCPSGTFGPSCLPCPGGTERPCGGYGQCEGE 172

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTR G+G C C   Y GE C +C  GYF++ ++   ++CS C   C + C+      C +
Sbjct: 173 GTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNSSHLVCSACFGPC-ARCTGPEESHCLQ 231

Query: 182 CKSGWAADKDIGCYDINECSDEN-ICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           CK GWA    + C DI+EC  E   C  +QFCVNTEGSY C  C  +C GC G GP  C+
Sbjct: 232 CKKGWAL-HHLKCVDIDECGTEQATCGADQFCVNTEGSYECRDCAKACLGCMGAGPGRCK 290

Query: 241 ACAEGYKLQQNICINT 256
            C+ GY+   + C++ 
Sbjct: 291 KCSRGYQQVGSKCLDV 306

Mus musculus (taxid: 10090)

>sp|Q4V7F2|CREL1_RAT Cysteine-rich with EGF-like domain protein 1 OS=Rattus norvegicus GN=Creld1 PE=2 SV=1

 Score =  196 bits (497), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 108/256 (42%), Positives = 146/256 (57%), Gaps = 10/256 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+E+T + NF GG+TAWEEEK   Y  SE RL+E+ E +CS+ S F  +CH      E  
Sbjct: 59  GLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSK-SDF--ECHRLLELSEEL 115

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
           +E WWF   H + +  DL+ WLC + LK CCP   +G  C PC G     C G G+C+G 
Sbjct: 116 VEAWWF---HRQQEAPDLFQWLCSDSLKLCCPSGTFGPSCLPCPGGTERPCGGYGQCEGE 172

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTR G+G C C   Y GE C +C  GYF++ ++   ++CS C   C + C+      C +
Sbjct: 173 GTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNSSHLVCSACFGPC-ARCTGPEESHCLQ 231

Query: 182 CKSGWAADKDIGCYDINECSDEN-ICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           C+ GWA    + C DI+EC  E   C   QFCVNTEGSY C  C  +C GC G GP  C+
Sbjct: 232 CRKGWAL-HHLKCVDIDECGTEQATCGAAQFCVNTEGSYECRDCAKACLGCMGAGPGRCK 290

Query: 241 ACAEGYKLQQNICINT 256
            C+ GY+   + C++ 
Sbjct: 291 KCSRGYQQVGSKCLDV 306

Rattus norvegicus (taxid: 10116)

>sp|Q96HD1|CREL1_HUMAN Cysteine-rich with EGF-like domain protein 1 OS=Homo sapiens GN=CRELD1 PE=1 SV=3

 Score =  195 bits (496), Expect = 3e-49,   Method: Compositional matrix adjust.
 Identities = 109/256 (42%), Positives = 145/256 (56%), Gaps = 10/256 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+E+T + NF GG+TAWEEE    Y  SE RL+E+ E +CS+ S F  +CH      E  
Sbjct: 59  GLERTIRDNFGGGNTAWEEENLSKYKDSETRLVEVLEGVCSK-SDF--ECHRLLELSEEL 115

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
           +E WWF   H + +  DL+ WLC + LK CCP   +G  C PC G     C G G+C+G 
Sbjct: 116 VESWWF---HKQQEAPDLFQWLCSDSLKLCCPAGTFGPSCLPCPGGTERPCGGYGQCEGE 172

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTR G+G C C   Y GE C +C  GYF++ ++   ++CS C   C   CS      C +
Sbjct: 173 GTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNASHLVCSACFGPCAR-CSGPEESNCLQ 231

Query: 182 CKSGWAADKDIGCYDINECSDENI-CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           CK GWA    + C DI+EC  E   C  +QFCVNTEGSY C  C  +C GC G GP  C+
Sbjct: 232 CKKGWAL-HHLKCVDIDECGTEGANCGADQFCVNTEGSYECRDCAKACLGCMGAGPGRCK 290

Query: 241 ACAEGYKLQQNICINT 256
            C+ GY+   + C++ 
Sbjct: 291 KCSPGYQQVGSKCLDV 306

Homo sapiens (taxid: 9606)

>sp|Q6UXH1|CREL2_HUMAN Cysteine-rich with EGF-like domain protein 2 OS=Homo sapiens GN=CRELD2 PE=1 SV=1

 Score =  192 bits (487), Expect = 3e-48,   Method: Compositional matrix adjust.
 Identities = 116/284 (40%), Positives = 156/284 (54%), Gaps = 17/284 (5%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+  TAK NF GG+TAWEE+    Y  SE+RL+EI E +C E S F  +C+      E  
Sbjct: 44  GMVDTAKKNFGGGNTAWEEKTLSKYESSEIRLLEILEGLC-ESSDF--ECNQMLEAQEEH 100

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
           +E WW ++   K++  DL+ W C+  LK CC    YG DC  C G     C GNG C G+
Sbjct: 101 LEAWWLQL---KSEYPDLFEWFCVKTLKVCCSPGTYGPDCLACQGGSQRPCSGNGHCSGD 157

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           G+R+G+G C C+  Y G LC +C  GYF S ++E   +C+ C  SC++ CS    + C +
Sbjct: 158 GSRQGDGSCRCHMGYQGPLCTDCMDGYFSSLRNETHSICTACDESCKT-CSGLTNRDCGE 216

Query: 182 CKSGWAADKDIGCYDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           C+ GW  D+   C D++EC+ E   CS  QFC N  GSY C +CD SC GC G+GP  C+
Sbjct: 217 CEVGWVLDEG-ACVDVDECAAEPPPCSAAQFCKNANGSYTCEECDSSCVGCTGEGPGNCK 275

Query: 241 ACAEGYKLQQNICINTQAKSQ------NTNENLYRY-GVYVGLC 277
            C  GY  +   C +    S         NEN Y   G YV +C
Sbjct: 276 ECISGYAREHGQCADVDECSLAEKTCVRKNENCYNTPGSYVCVC 319

May regulate transport of alpha4-beta2 neuronal acetylcholine receptor.

Homo sapiens (taxid: 9606)

>sp|Q60438|CREL2_CRIGR Cysteine-rich with EGF-like domain protein 2 OS=Cricetulus griseus GN=CRELD2 PE=2 SV=1

 Score =  184 bits (468), Expect = 7e-46,   Method: Compositional matrix adjust.
 Identities = 113/288 (39%), Positives = 158/288 (54%), Gaps = 17/288 (5%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+  TA+ NF GG+TAWEE+    Y  SE+RL+EI E +C + + F  +C+      E +
Sbjct: 43  GMANTARKNFGGGNTAWEEKSLSKYEFSEIRLLEIMEGLC-DSNDF--ECNQLLEQHEEQ 99

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
           +E WW   Q  K +  +L+ W C++ LK CC    YG DC+ C G     C GNG C G+
Sbjct: 100 LEAWW---QTLKKECPNLFEWFCVHTLKACCLPGTYGPDCQECQGGSQRPCSGNGHCDGD 156

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           G+R+G+G C C+  Y G LC +C  GYF   ++E    C+ C  SC++ CS    KGC +
Sbjct: 157 GSRQGDGSCQCHVGYKGPLCIDCMDGYFSLLRNETHSFCTACDESCKT-CSGPTNKGCVE 215

Query: 182 CKSGWAADKDIGCYDINECSDEN-ICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           C+ GW   +D  C D++EC+ E   CS  Q+C N  GSY C +CD +C GC G GP  C+
Sbjct: 216 CEVGWTRVED-ACVDVDECAAETPPCSNVQYCENVNGSYTCEECDSTCVGCTGKGPANCK 274

Query: 241 ACAEGYKLQQNICINTQAKSQNT------NENLYRY-GVYVGLCVATY 281
            C  GY  Q+  C +    S  T      NEN Y   G +V +C   +
Sbjct: 275 ECISGYSKQKGECADIDECSLETKVCKKENENCYNTPGSFVCVCPEGF 322

May regulate transport of alpha4-beta2 neuronal acetylcholine receptor.

Cricetulus griseus (taxid: 10029)

>sp|Q2KIT5|CREL2_BOVIN Cysteine-rich with EGF-like domain protein 2 OS=Bos taurus GN=CRELD2 PE=2 SV=1

 Score =  181 bits (460), Expect = 5e-45,   Method: Compositional matrix adjust.
 Identities = 113/284 (39%), Positives = 153/284 (53%), Gaps = 17/284 (5%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+  TAK NF GG+TAWEE+    Y  SEVRL+EI E +C E S F  +C+    + E  
Sbjct: 41  GMVDTAKKNFGGGNTAWEEKTLSKYEFSEVRLLEIVEGLC-EASDF--ECNQLLEEQEEL 97

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
           +E WW ++   K K  DL+ W C+  LK CC    YG DC  C G     C GNG C G+
Sbjct: 98  LEAWWLRL---KKKHPDLFEWFCVQTLKACCSPGTYGPDCLACQGGSERPCSGNGHCVGD 154

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTR+G+G C C+  Y G LC++C  GYF+S   E   +CS C  +C++ C     + C +
Sbjct: 155 GTREGDGSCQCHLGYQGPLCSDCMDGYFRSPTSETHSICSACDEACKT-CVGPTNRDCGQ 213

Query: 182 CKSGWAADKDIGCYDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           C+ GW   +D  C D++EC+ E   C   Q+C N  GS+ C +CDP+C GC G GP  C 
Sbjct: 214 CEVGWVR-QDDACVDVDECAAEPPPCEDTQYCENVNGSFVCEECDPTCMGCTGKGPTQCR 272

Query: 241 ACAEGYKLQQNICIN------TQAKSQNTNENLYRY-GVYVGLC 277
            C  GY  +   C +       +      NEN Y   G +V +C
Sbjct: 273 ECIAGYSKESGQCEDIDECSLAEKPCLRDNENCYNTPGSFVCVC 316

May regulate transport of alpha4-beta2 neuronal acetylcholine receptor.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
332026184	359	Cysteine-rich with EGF-like domain prote	0.924	0.846	0.548	6e-99
322780812	324	hypothetical protein SINV_05381 [Solenop	0.948	0.962	0.552	1e-98
383850574	380	PREDICTED: cysteine-rich with EGF-like d	0.945	0.818	0.547	7e-98
307210240	378	Cysteine-rich with EGF-like domain prote	0.945	0.822	0.534	8e-98
380014596	380	PREDICTED: cysteine-rich with EGF-like d	0.948	0.821	0.537	1e-95
156555055	381	PREDICTED: cysteine-rich with EGF-like d	0.960	0.829	0.535	2e-95
328786339	380	PREDICTED: cysteine-rich with EGF-like d	0.948	0.821	0.531	7e-94
350406153	379	PREDICTED: cysteine-rich with EGF-like d	0.945	0.820	0.513	2e-92
91095041	374	PREDICTED: similar to AGAP007968-PA [Tri	0.927	0.815	0.574	8e-92
289741833	380	uncharacterized conserved protein [Gloss	0.960	0.831	0.507	1e-90

>gi|332026184|gb|EGI66326.1| Cysteine-rich with EGF-like domain protein 2 [Acromyrmex echinatior]

 Score =  367 bits (941), Expect = 6e-99,   Method: Compositional matrix adjust.
 Identities = 169/308 (54%), Positives = 225/308 (73%), Gaps = 4/308 (1%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+EKT++G F GGD+AWEE+K   Y++SE+RLIEIQE +C +V     QC + A ++E++
Sbjct: 37  GLEKTSRGKFEGGDSAWEEDKLGTYSRSEIRLIEIQENLCKDVERGQVQCQSLAEELENQ 96

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFP-NVCFGNGKCKGN 121
           IEEWWFK Q +     D+Y ++CI K +RCCP DHYG +C  C G+P N+C  NGKCKG 
Sbjct: 97  IEEWWFKHQDTHP---DIYDYICIEKTERCCPKDHYGPNCTQCPGYPDNICNNNGKCKGA 153

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTRKGNG C C K Y G++C+EC +GY++SYKDEKT+LCS CH +C+  C   GPK C K
Sbjct: 154 GTRKGNGGCFCEKGYIGDICSECASGYYESYKDEKTLLCSVCHTACDGPCRGAGPKDCEK 213

Query: 182 CKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEA 241
           C +GW   ++ GC+DINEC  ++IC  NQFCVN EG+Y C+ CD +CN C GDGPDMC  
Sbjct: 214 CTAGWDMIENKGCFDINECLKDDICPSNQFCVNKEGNYACLACDKACNSCTGDGPDMCIR 273

Query: 242 CAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAIY 301
           C EGY  Q N+CIN+    +   ENL RY  Y GLCVAT II Q+N+++ASI+G++VA+Y
Sbjct: 274 CTEGYHKQDNLCINSDLLGRKKQENLARYLTYFGLCVATCIILQRNIYVASIIGLLVAMY 333

Query: 302 VSVAEYIL 309
           +SV+EY++
Sbjct: 334 ISVSEYMI 341

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|322780812|gb|EFZ10041.1| hypothetical protein SINV_05381 [Solenopsis invicta]

 Score =  365 bits (938), Expect = 1e-98,   Method: Compositional matrix adjust.
 Identities = 178/322 (55%), Positives = 228/322 (70%), Gaps = 10/322 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           GIEKT++G F GGD+AWEE+K   Y++SE+RLIEIQE +C +V     QCH+ A ++ES+
Sbjct: 1   GIEKTSRGKFEGGDSAWEEDKLGSYSRSEIRLIEIQENLCKDVERGETQCHSLAEELESQ 60

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPN-VCFGNGKCKGN 121
           IEEWWFK Q       D+Y ++CI K + CCP DHYG +C  C G+P+ +C  NGKCKG 
Sbjct: 61  IEEWWFKYQDIHP---DIYDYICIEKTEHCCPKDHYGPNCAQCPGYPDKICSNNGKCKGA 117

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTRKGNG C C+K Y G++C+EC  GY++SYKDEKT+LCS CH +C   C  GGPK C K
Sbjct: 118 GTRKGNGGCFCDKGYIGDICSECAPGYYESYKDEKTLLCSVCHVACNGSCRGGGPKDCEK 177

Query: 182 CKSGWAADKDIGCYDINEC-SDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           C +GW   +D GC+DI+EC   + IC GNQFCVN EGSY C+ CD +CNGC GDGPDMC 
Sbjct: 178 CAAGWHMIEDKGCFDIDECLKSDAICPGNQFCVNKEGSYACLACDKACNGCTGDGPDMCL 237

Query: 241 ACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAI 300
            CAE +  + NICIN+    +   ENL RY  Y GLCVAT II Q+NV+ ASI+G++VA+
Sbjct: 238 NCAEDFHKKDNICINSDLLGRKKQENLARYLTYFGLCVATCIILQRNVYAASIIGLLVAV 297

Query: 301 YVSVAEYIL-----NDKTAAFD 317
           Y+SV+EY++      D TA  D
Sbjct: 298 YISVSEYMIAHSNVQDTTANVD 319

Source: Solenopsis invicta

Species: Solenopsis invicta

Genus: Solenopsis

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|383850574|ref|XP_003700870.1| PREDICTED: cysteine-rich with EGF-like domain protein 2-like [Megachile rotundata]

 Score =  363 bits (931), Expect = 7e-98,   Method: Compositional matrix adjust.
 Identities = 177/323 (54%), Positives = 230/323 (71%), Gaps = 12/323 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           GIE+T++  F GGD+AWEE+    Y+KSE RLIEIQE +C EV     QCH  A ++ES 
Sbjct: 57  GIERTSREKFDGGDSAWEEDNLGSYSKSETRLIEIQEHLCKEVERGETQCHALAEELESN 116

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPN-VCFGNGKCKGN 121
           IEEWWF  Q +     DLY ++CI + +RCCP DH+G +C PC G+P+ VC  NGKCKG 
Sbjct: 117 IEEWWFNHQQTHP---DLYDYICIQQTERCCPKDHFGPECVPCPGYPDKVCSNNGKCKGA 173

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTRKGNG CVC+K Y GE C+EC+TG+++SY+DE  +LCS+CHA+C+  C   GPK C K
Sbjct: 174 GTRKGNGGCVCDKGYDGENCSECSTGFYESYRDENKLLCSQCHAACDGPCDGPGPKNCKK 233

Query: 182 CKSGWAADKDIGCYDINEC--SDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMC 239
           C  GW   K+ GC+DI+EC  SDE  C GNQFC+N +GSY C+ CD +CNGC GDGPDMC
Sbjct: 234 CMRGWYMVKEQGCFDIDECIKSDE-YCPGNQFCINKDGSYACLSCDKACNGCTGDGPDMC 292

Query: 240 EACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVA 299
             CAEGY  ++N+CIN+    +   EN+ RY  Y GLCVAT IIFQ+N++IAS++G++V 
Sbjct: 293 LKCAEGYYRKENLCINSDIVGRKQKENVARYTTYFGLCVATCIIFQRNIYIASVIGLLVG 352

Query: 300 IYVSVAEYIL-----NDKTAAFD 317
           IY+SV+EY++      D TA  D
Sbjct: 353 IYISVSEYMIAHSNVQDTTANVD 375

Source: Megachile rotundata

Species: Megachile rotundata

Genus: Megachile

Family: Megachilidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307210240|gb|EFN86890.1| Cysteine-rich with EGF-like domain protein 2 [Harpegnathos saltator]

 Score =  363 bits (931), Expect = 8e-98,   Method: Compositional matrix adjust.
 Identities = 171/320 (53%), Positives = 227/320 (70%), Gaps = 9/320 (2%)

Query: 4   IEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEI 63
           +EKT++G F GGD+AWEE+K   YAKSE+RL+EIQE +C ++     QCH+ A ++E  I
Sbjct: 57  LEKTSRGKFEGGDSAWEEDKLGPYAKSEIRLVEIQENLCKDIEHEETQCHSLAEELEGLI 116

Query: 64  EEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPN-VCFGNGKCKGNG 122
           E+WWFK Q +     D++ ++CI K +RCCP DHYG  CKPC G+P+ VC  NGKCKG G
Sbjct: 117 EDWWFKYQDTYP---DIHNYICIEKTQRCCPKDHYGPSCKPCPGYPDKVCNNNGKCKGAG 173

Query: 123 TRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKC 182
           TRKGNG C+C+  Y G+ C+EC +GY++SYKDEKT+LCS CHA+CE  C   GPK C KC
Sbjct: 174 TRKGNGSCLCDSGYIGDTCSECASGYYESYKDEKTLLCSACHAACEGPCRGAGPKDCEKC 233

Query: 183 KSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEAC 242
            +GW   ++ GC+DI+EC   +ICS NQFCVN EG + C+ CD +C+ C GDGPDMC  C
Sbjct: 234 ANGWQMIENKGCFDIDECLKRDICSRNQFCVNKEGGHSCLACDRACSDCTGDGPDMCIDC 293

Query: 243 AEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAIYV 302
           A+GY  + N+CIN+    +   ENL RY  Y GLCVAT II Q+NV+ A I+G++VA+Y+
Sbjct: 294 ADGYHKKDNLCINSDLLGRKKQENLARYLTYFGLCVATCIILQRNVYAAGIIGLLVAVYI 353

Query: 303 SVAEYIL-----NDKTAAFD 317
           SV+EY++      D TA  D
Sbjct: 354 SVSEYMIANSNVQDTTANMD 373

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|380014596|ref|XP_003691313.1| PREDICTED: cysteine-rich with EGF-like domain protein 1-like [Apis florea]

 Score =  355 bits (912), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 173/322 (53%), Positives = 219/322 (68%), Gaps = 10/322 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           GIE+T++  F GGD+AWEE K   Y+KSE RLIEIQE +C EV     QCH  A ++ES+
Sbjct: 57  GIERTSREKFDGGDSAWEENKLGSYSKSETRLIEIQEHLCKEVERGETQCHVLAEELESK 116

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPN-VCFGNGKCKGN 121
           IE+WWF  Q       D+Y ++CI + KRCCP DH+G  C PC GFP+ +C  NGKCKG 
Sbjct: 117 IEDWWFNHQQIYP---DIYDYICIQQTKRCCPKDHFGPQCTPCPGFPDRICNNNGKCKGA 173

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTRKGNG C C+K Y G+ C++C  G+++SYKDE  +LCS CHA+C+  C   GPK C K
Sbjct: 174 GTRKGNGGCFCDKGYEGDNCSKCANGFYESYKDENKLLCSHCHAACDGSCKGPGPKNCEK 233

Query: 182 CKSGWAADKDIGCYDINECSDEN-ICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           C  GW      GC+DI+EC   N  CS NQFC+N EG Y C+ CD SCNGC GDGPDMC 
Sbjct: 234 CTKGWYILDGQGCFDIDECIKNNEYCSKNQFCINKEGGYTCLNCDKSCNGCTGDGPDMCI 293

Query: 241 ACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAI 300
            CAEGY  + N+CIN+    +   EN+ RY  Y GLC+ATYIIFQ+N++IASI+G++V I
Sbjct: 294 KCAEGYHKKDNLCINSDLLGRKQQENIARYATYFGLCIATYIIFQRNIYIASIIGLLVGI 353

Query: 301 YVSVAEYI-----LNDKTAAFD 317
           Y+S +EYI     + D TA  D
Sbjct: 354 YISASEYIIAHSNIQDTTANMD 375

Source: Apis florea

Species: Apis florea

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|156555055|ref|XP_001603904.1| PREDICTED: cysteine-rich with EGF-like domain protein 2-like [Nasonia vitripennis]

 Score =  355 bits (911), Expect = 2e-95,   Method: Compositional matrix adjust.
 Identities = 172/321 (53%), Positives = 225/321 (70%), Gaps = 5/321 (1%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           GIEKT++G F GGD+AWEE+K   Y  SEVRLIEIQE +C ++     QCH+ A D+ES 
Sbjct: 57  GIEKTSRGKFEGGDSAWEEDKLGSYKTSEVRLIEIQEGLCKDLDYAQTQCHSLAEDLESF 116

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFP-NVCFGNGKCKGN 121
           +EEWWFK Q S     DLY++LCI K +RCCP D YG +C  C G+P NVC  NGKCKG+
Sbjct: 117 VEEWWFKRQDSHP---DLYSFLCIEKAERCCPKDQYGPNCDKCPGYPDNVCNSNGKCKGS 173

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTRKGNG+C C+K Y+GELC +C  G++QS+KDEK +LCS CH +C+  C+ GGP+ C +
Sbjct: 174 GTRKGNGKCTCDKGYSGELCFDCAAGFYQSFKDEKKLLCSPCHKACKGLCTGGGPRDCHE 233

Query: 182 CKSGWAADKDIGCYDINECSD-ENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           C  GW      GC+DI+EC + EN C  N FCVN EG++ C+ CD +C+GC GDGPDMC 
Sbjct: 234 CNPGWKKIDGKGCHDIDECLERENSCPDNHFCVNNEGNFSCIACDKACDGCSGDGPDMCN 293

Query: 241 ACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAI 300
            CAEGY  + +IC+N+    + T EN  RY  Y+GL VAT II Q+NV+ AS++G+ VAI
Sbjct: 294 VCAEGYNKKGSICVNSDILGRKTYENWTRYLTYLGLAVATSIILQRNVYAASVIGLCVAI 353

Query: 301 YVSVAEYILNDKTAAFDPPSI 321
           Y+SV+EY++         P+I
Sbjct: 354 YISVSEYLIAHSGIQDTMPNI 374

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328786339|ref|XP_394353.3| PREDICTED: cysteine-rich with EGF-like domain protein 2-like [Apis mellifera]

 Score =  350 bits (897), Expect = 7e-94,   Method: Compositional matrix adjust.
 Identities = 171/322 (53%), Positives = 217/322 (67%), Gaps = 10/322 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           GIE+T++  F GGD+AWEE K   Y+KSE RLIEIQE +C EV     QCH  A ++ES+
Sbjct: 57  GIERTSREKFDGGDSAWEENKLGSYSKSETRLIEIQEHLCKEVERGETQCHVLAEELESK 116

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPN-VCFGNGKCKGN 121
           IE+WWF  Q       D+Y ++CI + KRCCP DH+G  C  C GFP+ +C  NGKCKG 
Sbjct: 117 IEDWWFNHQQIYP---DIYDYICIQQTKRCCPKDHFGPQCTQCPGFPDRICNNNGKCKGA 173

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTRKGNG C C+K Y G  C++C  G+++SYKDE  +LCS CHA+C+  C   GPK C K
Sbjct: 174 GTRKGNGGCFCDKGYEGNNCSKCANGFYESYKDENKLLCSHCHAACDGSCKGPGPKNCEK 233

Query: 182 CKSGWAADKDIGCYDINECSDEN-ICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           C  GW      GC+DI+EC   N  CS +QFC+N EG Y C+ CD SCNGC GDGPDMC 
Sbjct: 234 CTKGWYILDGQGCFDIDECIKSNEYCSKDQFCINKEGGYTCLDCDKSCNGCTGDGPDMCI 293

Query: 241 ACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAI 300
            CAEGY  + N+CIN+    +   EN+ RY  Y GLC+ATYIIFQ+N++IASI+G++V I
Sbjct: 294 KCAEGYHKKDNLCINSDLLGRKQQENIARYATYFGLCIATYIIFQRNIYIASIIGLLVGI 353

Query: 301 YVSVAEYI-----LNDKTAAFD 317
           Y+S +EYI     + D TA  D
Sbjct: 354 YISASEYIIAHSSIQDTTANMD 375

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350406153|ref|XP_003487675.1| PREDICTED: cysteine-rich with EGF-like domain protein 2-like [Bombus impatiens]

 Score =  345 bits (884), Expect = 2e-92,   Method: Compositional matrix adjust.
 Identities = 166/323 (51%), Positives = 224/323 (69%), Gaps = 12/323 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           GIE+T++  F GGD+AWEE+K   Y+KSE RLIEIQE +C EV     QC   A ++E++
Sbjct: 56  GIERTSREKFDGGDSAWEEDKLGSYSKSETRLIEIQEHLCEEVEHGKIQCQTLAEELENK 115

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPN-VCFGNGKCKGN 121
           IE+WWF  Q +     D+Y ++CI + + CCP DH+G  CKPC GFP+ +C  NGKCKG 
Sbjct: 116 IEDWWFNYQQTHP---DIYDYICIQQTESCCPKDHFGPQCKPCPGFPDKICNNNGKCKGA 172

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTRKGNG+C C+K Y  + C+EC  G+++SYKDE  +LCS+CH +C+  C   GPK C K
Sbjct: 173 GTRKGNGKCSCDKGYEKDDCSECAIGFYESYKDENKLLCSQCHNACDGACKGPGPKNCEK 232

Query: 182 CKSGWAADKDIGCYDINEC--SDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMC 239
           C  GW      GC+DI+EC  SDE  CS NQFC+N EG Y C+ CD +C+GC GDGPDMC
Sbjct: 233 CTEGWHILDGQGCFDIDECLKSDE-YCSKNQFCINKEGGYTCLNCDVACDGCTGDGPDMC 291

Query: 240 EACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVA 299
             CA+GY+ + N+CIN+    +   EN+ RY  Y+GLC+AT IIFQ+N++IAS++G++V 
Sbjct: 292 INCADGYREKNNLCINSDLLGRKQQENVARYATYLGLCIATCIIFQRNIYIASVIGLLVG 351

Query: 300 IYVSVAEYIL-----NDKTAAFD 317
           IY+SV+EY++      D TA  D
Sbjct: 352 IYISVSEYMIAHSNVQDTTANVD 374

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|91095041|ref|XP_971778.1| PREDICTED: similar to AGAP007968-PA [Tribolium castaneum] gi|270014762|gb|EFA11210.1| hypothetical protein TcasGA2_TC005174 [Tribolium castaneum]

 Score =  343 bits (879), Expect = 8e-92,   Method: Compositional matrix adjust.
 Identities = 178/310 (57%), Positives = 219/310 (70%), Gaps = 5/310 (1%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           GIEKT KG F GGDTAWEEEK   YA SE+RLIEIQE +CS+V    DQC+      +SE
Sbjct: 50  GIEKTKKGKFEGGDTAWEEEKLGSYATSEIRLIEIQESVCSDVVEGKDQCYALHEQYDSE 109

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFP-NVCFGNGKCKGN 121
           IEEWWF   H +  + DL+ + CI  ++ CCP  HYG +C PC G+P NVC  NGKCKG+
Sbjct: 110 IEEWWF---HKQGDEPDLFKYFCIKTVEHCCPDLHYGTNCTPCPGYPDNVCSNNGKCKGS 166

Query: 122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
           GTRKG+GQC C+  YTGE CN C   Y+++YKDEK +LCSKCH SCE  CS  GP GC K
Sbjct: 167 GTRKGSGQCSCDPGYTGETCNACAETYYEAYKDEKKLLCSKCHTSCEGPCSKAGPAGCEK 226

Query: 182 CKSGWAADKDIGCYDINECSD-ENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           CK GW   K+ GC DINEC+  ++ C  NQFCVN +GSY+C+ CD SC GC GDGPDMC 
Sbjct: 227 CKPGWVMSKEKGCTDINECATAQSPCKLNQFCVNNDGSYKCLDCDRSCAGCTGDGPDMCT 286

Query: 241 ACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVAI 300
            CA GY L  N+C + + +S+  +  L RY  Y+GLCVAT IIF KN  +A+I+G+ VAI
Sbjct: 287 QCASGYVLVDNMCTDAEQESRKQHVFLTRYMTYLGLCVATCIIFNKNTILAAIIGIAVAI 346

Query: 301 YVSVAEYILN 310
           Y+SV+EY+LN
Sbjct: 347 YISVSEYVLN 356

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|289741833|gb|ADD19664.1| uncharacterized conserved protein [Glossina morsitans morsitans]

 Score =  339 bits (869), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 166/327 (50%), Positives = 218/327 (66%), Gaps = 11/327 (3%)

Query: 3   GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
           G+EKT++G  AGGD AWEEEK + Y  SEVR +EIQE +C E     DQCHN A D E  
Sbjct: 54  GLEKTSRGKHAGGDAAWEEEKLRSYKTSEVRFVEIQENLCQEKKRGQDQCHNMANDYEPL 113

Query: 63  IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNG 122
           +EEW+ +    K  ++DL  WLCI +L+ CCP  HYG+DCK C    + C GNGKCKG+G
Sbjct: 114 LEEWFTR----KQAEADLQDWLCIQRLQLCCPPGHYGSDCKRC----SDCQGNGKCKGDG 165

Query: 123 TRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCE--SGCSTGGPKGCT 180
           TRKGNGQC C+  Y G  CNECN GY+++++D K +LCS+CH +C    GC+  GPK C+
Sbjct: 166 TRKGNGQCACDAGYAGSNCNECNKGYYEAFRDNKKLLCSECHKACTKMEGCTGAGPKACS 225

Query: 181 KCKSGWAADKDIGCYDINECSD-ENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMC 239
           KC  GW   +  GC D+NEC D   +C  NQFCVN +GSY C++CD SC+GC GDGPDMC
Sbjct: 226 KCNEGWRWFETHGCQDVNECIDVPRVCRPNQFCVNNDGSYTCLECDRSCDGCDGDGPDMC 285

Query: 240 EACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNVFIASIVGVVVA 299
           + CA GY L++  C +  ++ ++   N+ R+  Y GLCVAT +IFQ +  IA IVG  VA
Sbjct: 286 KQCANGYALKEGKCQDESSEQRDKYVNITRFLTYFGLCVATCVIFQSSTHIAYIVGAAVA 345

Query: 300 IYVSVAEYILNDKTAAFDPPSIITKHL 326
           IY++ +EY L+    A + P + TK L
Sbjct: 346 IYIAASEYWLSSNPQAANKPQLDTKQL 372

Source: Glossina morsitans morsitans

Species: Glossina morsitans

Genus: Glossina

Family: Glossinidae

Order: Diptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	329
FB|FBgn0031217	374	CG11377 [Drosophila melanogast	0.963	0.847	0.469	1.6e-86
ZFIN|ZDB-GENE-040426-1626	341	creld2 "cysteine-rich with EGF	0.741	0.715	0.474	1.9e-67
UNIPROTKB|E1BQM1	363	CRELD2 "Uncharacterized protei	0.775	0.702	0.439	2e-65
UNIPROTKB|F1SQD9	420	CRELD1 "Uncharacterized protei	0.823	0.645	0.409	2.2e-59
UNIPROTKB|Q96HD1	420	CRELD1 "Cysteine-rich with EGF	0.744	0.583	0.427	7.3e-59
UNIPROTKB|F1N3P8	420	CRELD1 "Cysteine-rich with EGF	0.744	0.583	0.431	9.3e-59
UNIPROTKB|Q5EA46	420	CRELD1 "Cysteine-rich with EGF	0.744	0.583	0.431	9.3e-59
UNIPROTKB|F1PD72	421	CRELD1 "Uncharacterized protei	0.823	0.643	0.407	9.3e-59
MGI|MGI:2152539	420	Creld1 "cysteine-rich with EGF	0.744	0.583	0.427	1.2e-58
RGD|1309412	420	Creld1 "cysteine-rich with EGF	0.744	0.583	0.423	5.1e-58

FB|FBgn0031217 CG11377 [Drosophila melanogaster (taxid:7227)]

 Score = 865 (309.6 bits), Expect = 1.6e-86, P = 1.6e-86
 Identities = 156/332 (46%), Positives = 211/332 (63%)

Query:     2 SGIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGF-LDQCHNFAADIE 60
             +G+E+T +G+ AGGDTAWEEEK + Y  SEVRL+EIQEK+CSE      D CHN A + E
Sbjct:    43 AGLERTKRGH-AGGDTAWEEEKLRSYKNSEVRLVEIQEKLCSEGEVINKDHCHNLANEHE 101

Query:    61 SEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKG 120
             + +E+W+    H + +  DL +WLCI++L  CCP++ YG DC  C      C GNGKCKG
Sbjct:   102 ALLEDWFI---HKQTESPDLQSWLCIDQLTVCCPLNTYGPDCLTC----TECNGNGKCKG 154

Query:   121 NGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASC-ESGCSTGGPKGC 179
             +GTRKGNG+C C+  Y G  CNEC   +++S++DEK +LC++CHA+C E GC+ GGPK C
Sbjct:   155 DGTRKGNGKCKCDPGYAGPNCNECGPEHYESFRDEKKLLCTQCHAACGEGGCTGGGPKSC 214

Query:   180 TKCKSGWAADKDIGCYDINECSDE---NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGP 236
              KCK GW+ D + GC DINEC ++   N C   QFCVN EGS+ C++CD SC+GC GDGP
Sbjct:   215 RKCKKGWSMDSEAGCVDINECLEQQRPNPCRPQQFCVNNEGSFSCLECDRSCDGCDGDGP 274

Query:   237 DMCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIFQKNXXXXXX--X 294
             DMC  CA+GY+L++  C +  A+ ++   +  R   Y G+CVAT +IFQ +         
Sbjct:   275 DMCRKCADGYELKEGKCHDISAEQRSNYVSFTRMLTYFGMCVATCVIFQSSTHIAWGCIV 334

Query:   295 XXXXXXXXXXXEYILNDKTAAFDPPSIITKHL 326
                        EY +N +      P I TK L
Sbjct:   335 GAAVAGYIAVSEYWINSEAGGGHQPEIDTKQL 366

GO:0005509 "calcium ion binding" evidence=IEA

ZFIN|ZDB-GENE-040426-1626 creld2 "cysteine-rich with EGF-like domains 2" [Danio rerio (taxid:7955)]

 Score = 685 (246.2 bits), Expect = 1.9e-67, P = 1.9e-67
 Identities = 120/253 (47%), Positives = 157/253 (62%)

Query:     3 GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
             G+EKTAK NF GG+TAWEE K   Y  SE+RL EI E +C   S F  +C +   + E  
Sbjct:    44 GLEKTAKQNFGGGNTAWEERKLSKYETSEIRLTEILEGLCQS-SNF--ECSHMLEENEEH 100

Query:    63 IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPN-VCFGNGKCKGN 121
             +E WWFK    K K  DL+ W CI  +K CCP   +G DC  C+G  +  C GNGKC G+
Sbjct:   101 LEAWWFK---RKTKHPDLFKWFCIETIKVCCPKGSFGPDCNTCIGGADRPCHGNGKCDGD 157

Query:   122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
             GTR GNG+C C++ Y GE C +C+ GYF S +++   LC +CH SC  GCS G  + C +
Sbjct:   158 GTRAGNGKCSCDEGYDGEFCLDCSDGYFNSLRNDTFFLCKECHESCV-GCSGGTNQHCKE 216

Query:   182 CKSGWAADKDIGCYDINEC-SDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
             C++GW  D++  C DINEC  D   CS +Q+C+NT+GS+ C  CD  C GC GDG   C 
Sbjct:   217 CRNGWVKDQEGSCIDINECIKDPAPCSDDQYCLNTDGSFSCKACDIRCTGCKGDGASSCL 276

Query:   241 ACAEGYKLQQNIC 253
              CA+GYK ++  C
Sbjct:   277 NCADGYKDEEGTC 289

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005576 "extracellular region" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

UNIPROTKB|E1BQM1 CRELD2 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 666 (239.5 bits), Expect = 2.0e-65, P = 2.0e-65
 Identities = 117/266 (43%), Positives = 159/266 (59%)

Query:     3 GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
             G+  TAK NF GG+TAWEE+    Y  SE+RL+EI E +C   S F  +C+N   + E  
Sbjct:    53 GLADTAKKNFGGGNTAWEEKTLSKYESSEIRLVEITENLCDS-SNF--ECNNMVEEHEEH 109

Query:    63 IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
             IE+WWFK+   K K  DL+ W CI  L+ CCP   YG DC  C G     C GNG C G+
Sbjct:   110 IEKWWFKL---KKKYPDLFKWFCIETLEVCCPPGTYGPDCLACRGGSERPCHGNGHCDGD 166

Query:   122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
             GTR G+G C CNKEYTGE C +C++GY+ S ++E   +C+ CH +C++ C+    K C  
Sbjct:   167 GTRGGDGTCSCNKEYTGEFCLDCSSGYYSSLRNETHSVCTACHTACKT-CTGSSNKDCQD 225

Query:   182 CKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEA 241
             CK GW  +++  C D++EC+    C   Q+C+NT+GS+ C  CD SC GC G+G D C+ 
Sbjct:   226 CKEGWIKNEEAACVDLDECASSP-CKDEQYCLNTDGSFSCKACDASCVGCTGEGSDKCKT 284

Query:   242 CAEGYKLQQNICINTQAKSQNTNENL 267
             CA GY  +   C  T     N +E +
Sbjct:   285 CASGYMKEDEKC--TDIDECNLSEKV 308

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005615 "extracellular space" evidence=IEA

GO:0005783 "endoplasmic reticulum" evidence=IEA

GO:0005794 "Golgi apparatus" evidence=IEA

UNIPROTKB|F1SQD9 CRELD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 609 (219.4 bits), Expect = 2.2e-59, P = 2.2e-59
 Identities = 117/286 (40%), Positives = 156/286 (54%)

Query:     3 GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
             G+E+T + NF GG+TAWEEEK   Y  SE RL+E+ E +CS+ S F  +CH      E  
Sbjct:    59 GLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSK-SDF--ECHRLLELSEEL 115

Query:    63 IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
             +E WWF   H + +  DL+ WLC + LK CCP   +G  C PC G     C G G+C+G 
Sbjct:   116 VESWWF---HKQQEAPDLFQWLCSDSLKLCCPSGTFGPTCLPCPGGTERPCGGYGQCEGE 172

Query:   122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
             GTR G+G+C C   Y GE C +C  GYF++ ++   ++CS C   C + CS      C +
Sbjct:   173 GTRGGSGRCDCQAGYGGEACGQCGLGYFEAERNSSHLVCSACFGPC-ARCSGPEESNCLQ 231

Query:   182 CKSGWAADKDIGCYDINECSDENI-CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
             CK GWA    + C DI+EC  E   C  +QFCVNTEGSY C  C  +C GC G GP  C+
Sbjct:   232 CKKGWALHH-LKCVDIDECGTERASCGADQFCVNTEGSYECRDCAKACLGCMGAGPGRCK 290

Query:   241 ACAEGYKLQQNICINTQ----AKSQNTNENLYRY-GVYVGLCVATY 281
              C+ GY+   + C++      A     NE      G Y  +C   Y
Sbjct:   291 KCSPGYQQVGSKCLDVDECETAVCPGENEKCENTEGSYRCICAEGY 336

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|Q96HD1 CRELD1 "Cysteine-rich with EGF-like domain protein 1" [Homo sapiens (taxid:9606)]

 Score = 604 (217.7 bits), Expect = 7.3e-59, P = 7.3e-59
 Identities = 109/255 (42%), Positives = 146/255 (57%)

Query:     3 GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
             G+E+T + NF GG+TAWEEE    Y  SE RL+E+ E +CS+ S F  +CH      E  
Sbjct:    59 GLERTIRDNFGGGNTAWEEENLSKYKDSETRLVEVLEGVCSK-SDF--ECHRLLELSEEL 115

Query:    63 IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
             +E WWF   H + +  DL+ WLC + LK CCP   +G  C PC G     C G G+C+G 
Sbjct:   116 VESWWF---HKQQEAPDLFQWLCSDSLKLCCPAGTFGPSCLPCPGGTERPCGGYGQCEGE 172

Query:   122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
             GTR G+G C C   Y GE C +C  GYF++ ++   ++CS C   C + CS      C +
Sbjct:   173 GTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNASHLVCSACFGPC-ARCSGPEESNCLQ 231

Query:   182 CKSGWAADKDIGCYDINECSDENI-CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
             CK GWA    + C DI+EC  E   C  +QFCVNTEGSY C  C  +C GC G GP  C+
Sbjct:   232 CKKGWALHH-LKCVDIDECGTEGANCGADQFCVNTEGSYECRDCAKACLGCMGAGPGRCK 290

Query:   241 ACAEGYKLQQNICIN 255
              C+ GY+   + C++
Sbjct:   291 KCSPGYQQVGSKCLD 305

GO:0005509 "calcium ion binding" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0003279 "cardiac septum development" evidence=TAS

GO:0003197 "endocardial cushion development" evidence=TAS

UNIPROTKB|F1N3P8 CRELD1 "Cysteine-rich with EGF-like domain protein 1" [Bos taurus (taxid:9913)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 110/255 (43%), Positives = 146/255 (57%)

Query:     3 GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
             G+E+T + NF GG+TAWEEEK   Y  SE RL+E+ E +CS+ S F  +CH      E  
Sbjct:    59 GLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSK-SDF--ECHRLLELSEEL 115

Query:    63 IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
             +E WWF   H + +  DL+ WLC + LK CCP   +G  C PC G     C G G C+G 
Sbjct:   116 VESWWF---HKQQEAPDLFQWLCSDSLKLCCPSGTFGPSCLPCPGGAERPCGGYGHCEGE 172

Query:   122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
             GTR G+G C C   Y GE C +C  GYF++ ++   ++CS C   C + CS      C +
Sbjct:   173 GTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNASHLVCSACFGPC-ARCSGPEESHCLQ 231

Query:   182 CKSGWAADKDIGCYDINECSDENI-CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
             CK GWA    + C DI+EC  E   C  +QFCVNTEGSY C  C  +C GC G GP  C+
Sbjct:   232 CKKGWALHH-LKCVDIDECGTERASCGADQFCVNTEGSYECRDCAKACLGCMGAGPGRCK 290

Query:   241 ACAEGYKLQQNICIN 255
              C+ GY+   + C++
Sbjct:   291 KCSPGYQQVGSKCLD 305

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|Q5EA46 CRELD1 "Cysteine-rich with EGF-like domain protein 1" [Bos taurus (taxid:9913)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 110/255 (43%), Positives = 146/255 (57%)

Query:     3 GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
             G+E+T + NF GG+TAWEEEK   Y  SE RL+E+ E +CS+ S F  +CH      E  
Sbjct:    59 GLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSK-SDF--ECHRLLELSEEL 115

Query:    63 IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
             +E WWF   H + +  DL+ WLC + LK CCP   +G  C PC G     C G G C+G 
Sbjct:   116 VESWWF---HKQQEAPDLFQWLCSDSLKLCCPSGTFGPSCLPCPGGAERPCGGYGHCEGE 172

Query:   122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
             GTR G+G C C   Y GE C +C  GYF++ ++   ++CS C   C + CS      C +
Sbjct:   173 GTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNASHLVCSACFGPC-ARCSGPEESHCLQ 231

Query:   182 CKSGWAADKDIGCYDINECSDENI-CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
             CK GWA    + C DI+EC  E   C  +QFCVNTEGSY C  C  +C GC G GP  C+
Sbjct:   232 CKKGWALHH-LKCVDIDECGTERASCGADQFCVNTEGSYECRDCAKACLGCMGAGPGRCK 290

Query:   241 ACAEGYKLQQNICIN 255
              C+ GY+   + C++
Sbjct:   291 KCSPGYQQVGSKCLD 305

GO:0016021 "integral to membrane" evidence=IEA

GO:0005509 "calcium ion binding" evidence=IEA

UNIPROTKB|F1PD72 CRELD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 603 (217.3 bits), Expect = 9.3e-59, P = 9.3e-59
 Identities = 117/287 (40%), Positives = 158/287 (55%)

Query:     3 GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
             G+E+T + NF GG+TAWEEEK   Y  SE RL+E+ E +CS+ S F  +CH      E  
Sbjct:    59 GLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLESVCSK-SDF--ECHRLLELSEEL 115

Query:    63 IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
             +E WWF   H + +  DL+ WLC + LK CCP   +G  C PC G     C G G+C+G 
Sbjct:   116 VESWWF---HKQQEAPDLFQWLCSDSLKLCCPSGTFGPSCLPCPGGAEKPCGGYGQCEGE 172

Query:   122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
             GTR G+G C C   Y GE C +C  GYF++ ++   ++CS C   C + CS      C +
Sbjct:   173 GTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNASHLVCSACFGPC-ARCSGPEESNCLQ 231

Query:   182 CKSGWAADKDIGCY-DINECSDENI-CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMC 239
             CK GWA    + C  DI+EC  E   C  +QFCVNTEGSY C  C  +C GC G GP  C
Sbjct:   232 CKKGWALHH-LKCVADIDECGTERASCGADQFCVNTEGSYECRDCAKACLGCMGAGPGRC 290

Query:   240 EACAEGYKLQQNICINT-QAKSQ---NTNENLYRY-GVYVGLCVATY 281
             + C+ GY+   + C++  + ++Q     NE      G Y  +C   Y
Sbjct:   291 KKCSPGYQQVGSKCLDVDECETQVCPGENEQCENTEGSYRCICAEGY 337

GO:0005509 "calcium ion binding" evidence=IEA

MGI|MGI:2152539 Creld1 "cysteine-rich with EGF-like domains 1" [Mus musculus (taxid:10090)]

 Score = 602 (217.0 bits), Expect = 1.2e-58, P = 1.2e-58
 Identities = 109/255 (42%), Positives = 146/255 (57%)

Query:     3 GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
             G+E+T + NF GG+TAWEEEK   Y  SE RL+E+ E +CS  S F  +CH      E  
Sbjct:    59 GLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSR-SDF--ECHRLLELSEEL 115

Query:    63 IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
             +E WWF   H + +  DL+ WLC + LK CCP   +G  C PC G     C G G+C+G 
Sbjct:   116 VENWWF---HRQQEAPDLFQWLCSDSLKLCCPSGTFGPSCLPCPGGTERPCGGYGQCEGE 172

Query:   122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
             GTR G+G C C   Y GE C +C  GYF++ ++   ++CS C   C + C+      C +
Sbjct:   173 GTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNSSHLVCSACFGPC-ARCTGPEESHCLQ 231

Query:   182 CKSGWAADKDIGCYDINECSDENI-CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
             CK GWA    + C DI+EC  E   C  +QFCVNTEGSY C  C  +C GC G GP  C+
Sbjct:   232 CKKGWALHH-LKCVDIDECGTEQATCGADQFCVNTEGSYECRDCAKACLGCMGAGPGRCK 290

Query:   241 ACAEGYKLQQNICIN 255
              C+ GY+   + C++
Sbjct:   291 KCSRGYQQVGSKCLD 305

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

RGD|1309412 Creld1 "cysteine-rich with EGF-like domains 1" [Rattus norvegicus (taxid:10116)]

 Score = 596 (214.9 bits), Expect = 5.1e-58, P = 5.1e-58
 Identities = 108/255 (42%), Positives = 146/255 (57%)

Query:     3 GIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESE 62
             G+E+T + NF GG+TAWEEEK   Y  SE RL+E+ E +CS+ S F  +CH      E  
Sbjct:    59 GLERTIRDNFGGGNTAWEEEKLSKYKDSETRLVEVLEGVCSK-SDF--ECHRLLELSEEL 115

Query:    63 IEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLG-FPNVCFGNGKCKGN 121
             +E WWF   H + +  DL+ WLC + LK CCP   +G  C PC G     C G G+C+G 
Sbjct:   116 VEAWWF---HRQQEAPDLFQWLCSDSLKLCCPSGTFGPSCLPCPGGTERPCGGYGQCEGE 172

Query:   122 GTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTK 181
             GTR G+G C C   Y GE C +C  GYF++ ++   ++CS C   C + C+      C +
Sbjct:   173 GTRGGSGHCDCQAGYGGEACGQCGLGYFEAERNSSHLVCSACFGPC-ARCTGPEESHCLQ 231

Query:   182 CKSGWAADKDIGCYDINECSDENI-CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
             C+ GWA    + C DI+EC  E   C   QFCVNTEGSY C  C  +C GC G GP  C+
Sbjct:   232 CRKGWALHH-LKCVDIDECGTEQATCGAAQFCVNTEGSYECRDCAKACLGCMGAGPGRCK 290

Query:   241 ACAEGYKLQQNICIN 255
              C+ GY+   + C++
Sbjct:   291 KCSRGYQQVGSKCLD 305

GO:0003674 "molecular_function" evidence=ND

GO:0005509 "calcium ion binding" evidence=IEA

GO:0005575 "cellular_component" evidence=ND

GO:0008150 "biological_process" evidence=ND

GO:0016021 "integral to membrane" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q7SXF6	CREL2_DANRE	No assigned EC number	0.4705	0.7477	0.7214	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	329
smart00179	39	smart00179, EGF_CA, Calcium-binding EGF-like domai	7e-06
cd00054	38	cd00054, EGF_CA, Calcium-binding EGF-like domain,	1e-05
pfam11938	151	pfam11938, DUF3456, TLR4 regulator and MIR-interac	2e-05
smart00261	45	smart00261, FU, Furin-like repeats	6e-05
cd00064	49	cd00064, FU, Furin-like repeats	5e-04

>gnl|CDD|214542 smart00179, EGF_CA, Calcium-binding EGF-like domain

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 17/31 (54%), Positives = 20/31 (64%), Gaps = 1/31 (3%)

Query: 196 DINECSDENICSGNQFCVNTEGSYRCMQCDP 226
           DI+EC+  N C     CVNT GSYRC +C P
Sbjct: 1   DIDECASGNPCQNGGTCVNTVGSYRC-ECPP 30

Length = 39

>gnl|CDD|238011 cd00054, EGF_CA, Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 17/31 (54%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 196 DINECSDENICSGNQFCVNTEGSYRCMQCDP 226
           DI+EC+  N C     CVNT GSYRC  C P
Sbjct: 1   DIDECASGNPCQNGGTCVNTVGSYRC-SCPP 30

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements. Length = 38

>gnl|CDD|221329 pfam11938, DUF3456, TLR4 regulator and MIR-interacting MSAP

 Score = 43.9 bits (104), Expect = 2e-05
 Identities = 29/140 (20%), Positives = 43/140 (30%), Gaps = 52/140 (37%)

Query: 2   SGIEKTAKGNF-----AGGDTAWEEEKQKIY-AKSEVRLIEIQEKMCS------------ 43
             + KT             D   + + +K Y A+SE+RL E+ E +C             
Sbjct: 16  EALSKTDPKKEVDVGGFRLDPDGKRKGKKKYYARSELRLTELLEGVCDRMLDYNLHKERS 75

Query: 44  ------------------------------EVSGFLDQCHNFAADIESEIEEWWFKVQHS 73
                                         EV+    QC     + E EIEEW+      
Sbjct: 76  GSRRFAKGMSPTFQTLHGLVLKGVKVDPSAEVAELKFQCERLLEEHEDEIEEWYKN---- 131

Query: 74  KAKDSDLYTWLCINKLKRCC 93
           +  + DL  +LC    K C 
Sbjct: 132 EQLEDDLSKFLCSEHSKACL 151

This family of proteins, found from plants to humans, is PRAT4 (A and B), a Protein Associated with Toll-like receptor 4. The Toll family of receptors - TLRs - plays an essential role in innate recognition of microbial products, the first line of defence against bacterial infection. PRAT4A influences the subcellular distribution and the strength of TLR responses and alters the relative activity of each TLR. PRAT4B regulates TLR4 trafficking to the cell surface and the extent of its expression there. TLR4 recognizes lipopolysaccharide (LPS), one of the most immuno-stimulatory glycolipids constituting the outer membrane of the Gram-negative bacteria. This family has also been described as a SAP-like MIR-interacting protein family. Length = 151

>gnl|CDD|214589 smart00261, FU, Furin-like repeats

 Score = 39.4 bits (92), Expect = 6e-05
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 220 RCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICI 254
            C  C P C  C G GPD C +C  G+ L    C+
Sbjct: 3   ECKPCHPECATCTGPGPDDCTSCKHGFFLDGGKCV 37

Length = 45

>gnl|CDD|238021 cd00064, FU, Furin-like repeats

 Score = 37.1 bits (86), Expect = 5e-04
 Identities = 14/31 (45%), Positives = 17/31 (54%)

Query: 224 CDPSCNGCHGDGPDMCEACAEGYKLQQNICI 254
           C PSC  C G GPD C +C  G+ L    C+
Sbjct: 2   CHPSCATCTGPGPDQCTSCRHGFYLDGGTCV 32

Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors. Length = 49

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	329
KOG4260|consensus	350		100.0
KOG1214|consensus	1289		99.25
PF11938	151	DUF3456: TLR4 regulator and MIR-interacting MSAP;	98.89
KOG1219|consensus	4289		98.86
KOG4260|consensus	350		98.68
KOG0994|consensus	1758		98.5
KOG4289|consensus	2531		98.31
KOG1225|consensus	525		98.27
KOG0994|consensus	1758		98.27
KOG1214|consensus	1289		98.09
KOG1217|consensus	487		98.07
KOG1225|consensus	525		98.02
PF14843	132	GF_recep_IV: Growth factor receptor domain IV; PDB	97.95
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	97.93
PTZ00214	800	high cysteine membrane protein Group 4; Provisiona	97.72
KOG4289|consensus	2531		97.71
KOG1836|consensus	1705		97.65
KOG1219|consensus	4289		97.61
PF03302	397	VSP: Giardia variant-specific surface protein; Int	97.52
PTZ00214	800	high cysteine membrane protein Group 4; Provisiona	97.49
PF14843	132	GF_recep_IV: Growth factor receptor domain IV; PDB	97.49
KOG1836|consensus	1705		97.31
PF03302	397	VSP: Giardia variant-specific surface protein; Int	97.28
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	97.09
cd00064	49	FU Furin-like repeats. Cysteine rich region. Exact	97.03
PF12662	24	cEGF: Complement Clr-like EGF-like	96.96
smart00261	46	FU Furin-like repeats.	96.95
KOG1217|consensus	487		96.88
PF07645	42	EGF_CA: Calcium-binding EGF domain; InterPro: IPR0	96.56
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	96.48
PF07974	32	EGF_2: EGF-like domain; InterPro: IPR013111 A sequ	96.41
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	96.41
PF12947	36	EGF_3: EGF domain; InterPro: IPR024731 This entry	96.32
smart00179	39	EGF_CA Calcium-binding EGF-like domain.	96.31
KOG1226|consensus	783		96.29
KOG4052|consensus	190		96.26
smart00051	63	DSL delta serrate ligand.	95.94
KOG1025|consensus	1177		95.92
cd00055	50	EGF_Lam Laminin-type epidermal growth factor-like	95.84
KOG0196|consensus	996		95.78
cd00053	36	EGF Epidermal growth factor domain, found in epide	95.76
KOG1025|consensus	1177		95.7
PF12662	24	cEGF: Complement Clr-like EGF-like	95.66
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	95.57
PF00053	49	Laminin_EGF: Laminin EGF-like (Domains III and V);	95.55
smart00180	46	EGF_Lam Laminin-type epidermal growth factor-like	95.44
smart00181	35	EGF Epidermal growth factor-like domain.	95.39
smart00261	46	FU Furin-like repeats.	95.06
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	95.03
KOG3512|consensus	592		95.01
PF12661	13	hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E	94.54
PF14670	36	FXa_inhibition: Coagulation Factor Xa inhibitory s	94.26
cd00064	49	FU Furin-like repeats. Cysteine rich region. Exact	94.06
cd00054	38	EGF_CA Calcium-binding EGF-like domain, present in	94.03
PF00008	32	EGF: EGF-like domain This is a sub-family of the P	93.94
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	93.68
PF00594	42	Gla: Vitamin K-dependent carboxylation/gamma-carbo	93.41
KOG1226|consensus	783		93.41
cd00053	36	EGF Epidermal growth factor domain, found in epide	92.75
PF12946	37	EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730	92.74
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	92.48
smart00181	35	EGF Epidermal growth factor-like domain.	92.42
smart00069	65	GLA Domain containing Gla (gamma-carboxyglutamate)	92.22
PF06247	197	Plasmod_Pvs28: Plasmodium ookinete surface protein	91.72
KOG3512|consensus	592		90.01
PTZ00382	96	Variant-specific surface protein (VSP); Provisiona	88.67
PF01414	63	DSL: Delta serrate ligand; InterPro: IPR001774 Lig	86.61
cd01475	224	vWA_Matrilin VWA_Matrilin: In cartilaginous plate,	85.83
PF09064	34	Tme5_EGF_like: Thrombomodulin like fifth domain, E	84.27
cd00185	98	TNFR Tumor necrosis factor receptor (TNFR) domain;	83.9
cd00185	98	TNFR Tumor necrosis factor receptor (TNFR) domain;	83.74
PHA03099	139	epidermal growth factor-like protein (EGF-like pro	83.22
PF01683	52	EB: EB module; InterPro: IPR006149 The EB domain h	81.98
PHA02887	126	EGF-like protein; Provisional	80.07

>KOG4260|consensus

Probab=100.00  E-value=1.7e-61  Score=418.15  Aligned_cols=272  Identities=43%  Similarity=0.952  Sum_probs=235.8

Q ss_pred             cchhhccCCCCCCCCchhhhhccCcccccceEEEecccCcccCcc--cCccchhhHHhhhHHHHHHhhhhccCCcccCCC
Q psy826            2 SGIEKTAKGNFAGGDTAWEEEKQKIYAKSEVRLIEIQEKMCSEVS--GFLDQCHNFAADIESEIEEWWFKVQHSKAKDSD   79 (329)
Q Consensus         2 ~~~~~~~~~~~~~~~~~~ee~~~~~y~~se~~~~e~~e~~C~~~~--~~~~~c~~~~~~~~~~~e~~~~~~~~~~~~~~~   79 (329)
                      +||+||+|+||+||||||||++|++|+.||+||+||+|++|+..+  ..||+||.+++.+|++||.||++.|+   ..||
T Consensus        42 ~GlerT~r~hfaGGdTAWEEknL~kYk~SE~RLvEilEglCsks~~~n~DfeCh~lle~hEellE~w~~hkq~---e~Pd  118 (350)
T KOG4260|consen   42 EGLERTARHHFAGGDTAWEEKNLSKYKTSETRLVEILEGLCSKSSLPNMDFECHTLLEKHEELLEEWWYHKQH---ESPD  118 (350)
T ss_pred             HHHHHHhhhccCCCchhhhhhhhhhccccchhHHHHHHHhhhccCCCCCChHHHHHHHHHHHHHHHHHHHhhc---CCch
Confidence            699999999999999999999999999999999999999999321  23899999999999999999999999   8899


Q ss_pred             ccceeecccccCcCCCCCCCCCCccCCCCC-CCCCCCCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcCCC
Q psy826           80 LYTWLCINKLKRCCPVDHYGADCKPCLGFP-NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTI  158 (329)
Q Consensus        80 ~~~~~C~~~~~~~C~~G~~G~~C~~C~~~~-~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~  158 (329)
                      +.+|+|++..+++||+|.||++|.+||+++ .+|+++|+|.+++++.|++.|.|.+||.|+.|..|.++||....++...
T Consensus       119 l~~WlCvdqLkvCCp~gtyGpdCl~Cpggser~C~GnG~C~GdGsR~GsGkCkC~~GY~Gp~C~~Cg~eyfes~Rne~~l  198 (350)
T KOG4260|consen  119 LFNWLCVDQLKVCCPDGTYGPDCLQCPGGSERPCFGNGSCHGDGSREGSGKCKCETGYTGPLCRYCGIEYFESSRNEQHL  198 (350)
T ss_pred             HHhHhhhhhheeccCCCCcCCccccCCCCCcCCcCCCCcccCCCCCCCCCcccccCCCCCccccccchHHHHhhcccccc
Confidence            999999999999999999999999999866 7999999999999999999999999999999999999999999999999


Q ss_pred             CCcCCcccccCCcccCCCCCCccCCCCceecCCCCcccCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCccc
Q psy826          159 LCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPD  237 (329)
Q Consensus       159 ~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~  237 (329)
                      +|..||..|...|++.++..|..|+.||.++. ..|+|||||... .+|...++|+|+.|||+|.. .+++..    ++.
T Consensus       199 vCt~Ch~~C~~~Csg~~~k~C~kCkkGW~lde-~gCvDvnEC~~ep~~c~~~qfCvNteGSf~C~d-k~Gy~~----g~d  272 (350)
T KOG4260|consen  199 VCTACHEGCLGVCSGESSKGCSKCKKGWKLDE-EGCVDVNECQNEPAPCKAHQFCVNTEGSFKCED-KEGYKK----GVD  272 (350)
T ss_pred             hhhhhhhhhhcccCCCCCCChhhhcccceecc-cccccHHHHhcCCCCCChhheeecCCCceEecc-cccccC----ChH
Confidence            99999999998999999999999999999995 789999999987 89999999999999999982 433332    466


Q ss_pred             ccccCcccccccCCcccccCcCCCCccccceeeeeeeceeeeEEEee
Q psy826          238 MCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLCVATYIIF  284 (329)
Q Consensus       238 ~C~~C~~Gy~~~~~~C~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  284 (329)
                      .|..|..++.+.+..|.+++....  .+.+..+.+++..++...+.+
T Consensus       273 ~C~~~~d~~~~kn~~c~ni~~~~r--~v~f~~~~~~~g~cV~~~~p~  317 (350)
T KOG4260|consen  273 ECQFCADVCASKNRPCMNIDGQYR--CVCFSGLIIIEGFCVWHGSPV  317 (350)
T ss_pred             HhhhhhhhcccCCCCcccCCccEE--EEecccceeeeeeeeccCCch
Confidence            777777777777777766653322  334445555555554444333

>KOG1214|consensus

Probab=99.25  E-value=8.6e-12  Score=123.37  Aligned_cols=127  Identities=29%  Similarity=0.689  Sum_probs=98.7

Q ss_pred             CCCCCC--CCCCc---cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCC----CCCCC---------cCCCCccccccC
Q psy826           93 CPVDHY--GADCK---PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYT----GELCN---------ECNTGYFQSYKD  154 (329)
Q Consensus        93 C~~G~~--G~~C~---~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~----g~~C~---------~C~~g~y~~~~~  154 (329)
                      |..||.  |..|.   +|......|..++.|.+   .+++++|.|..||.    +-+|.         .|.+|       
T Consensus       720 cs~g~~gdgr~c~d~~eca~~~~~CGp~s~Cin---~pg~~rceC~~gy~F~dd~~tCV~i~~pap~n~Ce~g-------  789 (1289)
T KOG1214|consen  720 CSSGYQGDGRNCVDENECATGFHRCGPNSVCIN---LPGSYRCECRSGYEFADDRHTCVLITPPAPANPCEDG-------  789 (1289)
T ss_pred             EeeccCCCCCCCCChhhhccCCCCCCCCceeec---CCCceeEEEeecceeccCCcceEEecCCCCCCccccC-------
Confidence            666776  55665   56666677999999999   89999999999986    34662         33332       


Q ss_pred             cCCCCCcCCcccccCCcc--cCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCc
Q psy826          155 EKTILCSKCHASCESGCS--TGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCH  232 (329)
Q Consensus       155 ~~~~~C~~C~~~C~~~C~--~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~  232 (329)
                        ...|.. ...  ..|+  +.+.|.| .|.+||.|++ ..|.|+|||.. ..|.++++|.|++|++.|+          
T Consensus       790 --~h~C~i-~g~--a~c~~hGgs~y~C-~CLPGfsGDG-~~c~dvDeC~p-srChp~A~CyntpgsfsC~----------  851 (1289)
T KOG1214|consen  790 --SHTCAI-AGQ--ARCVHHGGSTYSC-ACLPGFSGDG-HQCTDVDECSP-SRCHPAATCYNTPGSFSCR----------  851 (1289)
T ss_pred             --ccccCc-CCc--eEEEecCCceEEE-eecCCccCCc-cccccccccCc-cccCCCceEecCCCcceee----------
Confidence              222222 112  2455  5678999 9999999987 67999999996 7899999999999999999          


Q ss_pred             CCcccccccCcccccccCCccccc
Q psy826          233 GDGPDMCEACAEGYKLQQNICINT  256 (329)
Q Consensus       233 g~~~~~C~~C~~Gy~~~~~~C~~~  256 (329)
                               |.+||.|++.+|++.
T Consensus       852 ---------C~pGy~GDGf~CVP~  866 (1289)
T KOG1214|consen  852 ---------CQPGYYGDGFQCVPD  866 (1289)
T ss_pred             ---------cccCccCCCceecCC
Confidence                     999999999999865

>PF11938 DUF3456: TLR4 regulator and MIR-interacting MSAP; InterPro: IPR021852 This family of proteins are functionally uncharacterised

Probab=98.89  E-value=1.6e-10  Score=96.37  Aligned_cols=88  Identities=38%  Similarity=0.684  Sum_probs=73.8

Q ss_pred             cchhhccCCCC-----CCCCchhhhhccCcc-cccceEEEecccCcccCcc-----------------------------
Q psy826            2 SGIEKTAKGNF-----AGGDTAWEEEKQKIY-AKSEVRLIEIQEKMCSEVS-----------------------------   46 (329)
Q Consensus         2 ~~~~~~~~~~~-----~~~~~~~ee~~~~~y-~~se~~~~e~~e~~C~~~~-----------------------------   46 (329)
                      .+|++|..+++     -|+|++|+++++.+| ++||+||+|++|++|....                             
T Consensus        16 ~~l~~~~~~~~v~~~~~r~d~~g~~~~~~~~y~~SE~~l~EvlE~vC~~~~~Y~~~~~~~~~~~~~~~~~~~~~~~~~~~   95 (151)
T PF11938_consen   16 HRLAKTDPKKFVDVGGFRLDPDGERKKKKIPYARSELRLVEVLENVCEKMKDYVLHKDKSTGKRVYKRMSTTGGTNPELS   95 (151)
T ss_pred             HHHHHhCCcCceeccccccccccccccccCccccchhHHHHHHHHHccCcccceeeecCCCCceEEEecCCCcCcccccc
Confidence            36889999998     389999998888765 9999999999999999211                             


Q ss_pred             -------------cCccchhhHHhhhHHHHHHhhhhccCCcccCCCccceeecccccCcC
Q psy826           47 -------------GFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCC   93 (329)
Q Consensus        47 -------------~~~~~c~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~C~~~~~~~C   93 (329)
                                   .-.+.|+.+++++|+.|+.||++.+.   . .++..|+|.+..+.||
T Consensus        96 ~~~~~~~~~~~~~~L~~~C~~ilEe~Ed~i~~~~~~~~~---~-~~l~~~LC~~~~~~C~  151 (151)
T PF11938_consen   96 EKDVKVDPSDENKRLKFYCERILEEYEDEIEEWFFSEQD---E-DDLEEWLCSETSKVCC  151 (151)
T ss_pred             cccceeecHHHHhHHHHHHHHHHHHhHHHHHHHHHhcCC---c-cCHHHHhhhcccccCC
Confidence                         12467999999999999999998876   4 6889999998877654

This protein is found in eukaryotes. Proteins in this family are typically between 182 to 356 amino acids in length.

>KOG1219|consensus

Probab=98.86  E-value=1.3e-09  Score=116.78  Aligned_cols=101  Identities=30%  Similarity=0.734  Sum_probs=82.4

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC----cCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN----ECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKCK  183 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~----~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~  183 (329)
                      .+||.++|+|...  -.+.|+|.|++-|+|+.|+    .|..              .||..+  ++|. ..+.+.| .|+
T Consensus      3869 ~npCqhgG~C~~~--~~ggy~CkCpsqysG~~CEi~~epC~s--------------nPC~~G--gtCip~~n~f~C-nC~ 3929 (4289)
T KOG1219|consen 3869 DNPCQHGGTCISQ--PKGGYKCKCPSQYSGNHCEIDLEPCAS--------------NPCLTG--GTCIPFYNGFLC-NCP 3929 (4289)
T ss_pred             cCcccCCCEecCC--CCCceEEeCcccccCcccccccccccC--------------CCCCCC--CEEEecCCCeeE-eCC
Confidence            3789999999862  2566899999999999993    4544              577777  7888 6778999 999


Q ss_pred             CCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          184 SGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       184 ~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      .||.|..+.. ..++||.. +.|..++.|+|.+|+|.|.                   |-+||.+.
T Consensus      3930 ~gyTG~~Ce~-~Gi~eCs~-n~C~~gg~C~n~~gsf~Cn-------------------cT~g~~gr 3974 (4289)
T KOG1219|consen 3930 NGYTGKRCEA-RGISECSK-NVCGTGGQCINIPGSFHCN-------------------CTPGILGR 3974 (4289)
T ss_pred             CCccCceeec-cccccccc-ccccCCceeeccCCceEec-------------------cChhHhcc
Confidence            9999976321 12788986 7999999999999999999                   99999876

>KOG4260|consensus

Probab=98.68  E-value=1.3e-08  Score=89.64  Aligned_cols=107  Identities=24%  Similarity=0.631  Sum_probs=81.3

Q ss_pred             cCCCCCCCCCCcCCCCccccccCcCCCCCcCCcccccCCcc----cCCCCCCccCCCCceecCCCCcccCCCCCCCCCCC
Q psy826          132 CNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCS----TGGPKGCTKCKSGWAADKDIGCYDINECSDENICS  207 (329)
Q Consensus       132 C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~----~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~  207 (329)
                      |++|..|+.|..|+.|.-           .+|.++  +.|.    ..|+..| .|..||.|...+            .|.
T Consensus       132 Cp~gtyGpdCl~Cpggse-----------r~C~Gn--G~C~GdGsR~GsGkC-kC~~GY~Gp~C~------------~Cg  185 (350)
T KOG4260|consen  132 CPDGTYGPDCLQCPGGSE-----------RPCFGN--GSCHGDGSREGSGKC-KCETGYTGPLCR------------YCG  185 (350)
T ss_pred             cCCCCcCCccccCCCCCc-----------CCcCCC--CcccCCCCCCCCCcc-cccCCCCCcccc------------ccc
Confidence            888999999999988732           345544  4554    3457799 999999987643            333


Q ss_pred             CCcee-ecCCCCcccCCCcCCCC-CCcCCcccccccCcccccccCCcccccCcCCCCcc
Q psy826          208 GNQFC-VNTEGSYRCMQCDPSCN-GCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTN  264 (329)
Q Consensus       208 ~~~~C-~n~~gs~~C~~C~~~C~-~C~g~~~~~C~~C~~Gy~~~~~~C~~~~~~~~~~~  264 (329)
                      .+.+= ..+.....|.+||.+|. .|+|.++..|.+|+.||.++...|+|++++...+.
T Consensus       186 ~eyfes~Rne~~lvCt~Ch~~C~~~Csg~~~k~C~kCkkGW~lde~gCvDvnEC~~ep~  244 (350)
T KOG4260|consen  186 IEYFESSRNEQHLVCTACHEGCLGVCSGESSKGCSKCKKGWKLDEEGCVDVNECQNEPA  244 (350)
T ss_pred             hHHHHhhcccccchhhhhhhhhhcccCCCCCCChhhhcccceecccccccHHHHhcCCC
Confidence            23221 12345678999999997 99999999999999999999999999999876653

>KOG0994|consensus

Probab=98.50  E-value=4e-07  Score=93.57  Aligned_cols=188  Identities=23%  Similarity=0.514  Sum_probs=100.1

Q ss_pred             cCccchhhHHhhhHHHHHHhhhhccCCcccCC-Cccceeeccccc-CcCCCCCCCCCCccCCCC-----CCCCCCCCccc
Q psy826           47 GFLDQCHNFAADIESEIEEWWFKVQHSKAKDS-DLYTWLCINKLK-RCCPVDHYGADCKPCLGF-----PNVCFGNGKCK  119 (329)
Q Consensus        47 ~~~~~c~~~~~~~~~~~e~~~~~~~~~~~~~~-~~~~~~C~~~~~-~~C~~G~~G~~C~~C~~~-----~~~C~~~~~C~  119 (329)
                      +.++.|.+++....-.+..--..-.    ..+ .-.+..|..... +-|.|+-.|..|..|.++     +..|.. -.|.
T Consensus       742 ~~~e~C~~l~~~lsa~l~n~a~~Cn----CnptGSlS~vCn~~GGqCqCkPnVVGR~CdqCApGtyGFGPsGCk~-CdC~  816 (1758)
T KOG0994|consen  742 KSDEVCQNLDNSLSALLHNGASMCN----CNPTGSLSSVCNPNGGQCQCKPNVVGRRCDQCAPGTYGFGPSGCKA-CDCN  816 (1758)
T ss_pred             CcchhhhhhhhhHHHHHhcCccccc----cCCCccccccccCCCceecccCccccccccccCCcccCcCCccCcc-cccc
Confidence            5677888887776555432221111    111 112234444332 226777667777766442     222210 0121


Q ss_pred             CCC-----CCCCCceeecCCCCCCCCCCcCCCCccccc------cCcCCCCCcCCcccccCCcc-cCCCCCCccCCCCce
Q psy826          120 GNG-----TRKGNGQCVCNKEYTGELCNECNTGYFQSY------KDEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWA  187 (329)
Q Consensus       120 ~~~-----~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~------~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~  187 (329)
                      ..+     -..-+++|+|.+|..|..|+.|.+|||+-.      .+.-...|.+=.+.|. .|. ...++.|..|..||+
T Consensus       817 ~~Gs~~~~Cd~~tGQC~C~~g~ygrqCnqCqpG~WgFPeCr~CqCNgHA~~Cd~~tGaCi-~CqD~T~G~~CdrCl~Gyy  895 (1758)
T KOG0994|consen  817 SIGSLDKYCDKITGQCQCRPGTYGRQCNQCQPGYWGFPECRPCQCNGHADTCDPITGACI-DCQDSTTGHSCDRCLDGYY  895 (1758)
T ss_pred             ccccccccccccccceeeccccchhhccccCCCccCCCcCccccccCcccccCccccccc-cccccccccchhhhhcccc
Confidence            111     014568999999999999999999999621      1111222222223444 454 455689999999999


Q ss_pred             ecCC----CCcccCCCCCCCCCCCCCc--------eeecCC--CCcccCCCcCCCCCC-cCCcccccccCccccccc---
Q psy826          188 ADKD----IGCYDINECSDENICSGNQ--------FCVNTE--GSYRCMQCDPSCNGC-HGDGPDMCEACAEGYKLQ---  249 (329)
Q Consensus       188 ~~~~----~~C~d~~eC~~~~~C~~~~--------~C~n~~--gs~~C~~C~~~C~~C-~g~~~~~C~~C~~Gy~~~---  249 (329)
                      |++.    ..|.+   |    +|+.+.        .|....  ....|.        | .|....+|..|+++|.|+   
T Consensus       896 GdP~lg~g~~CrP---C----pCP~gp~Sg~~~A~sC~~d~~t~~ivC~--------C~~GY~G~RCe~CA~~~fGnP~~  960 (1758)
T KOG0994|consen  896 GDPRLGSGIGCRP---C----PCPDGPASGRQHADSCYLDTRTQQIVCH--------CQEGYSGSRCEICADNHFGNPSE  960 (1758)
T ss_pred             CCcccCCCCCCCC---C----CCCCCCccchhccccccccccccceeee--------cccCccccchhhhcccccCCccc
Confidence            9882    22432   1    232211        111111  111222        2 366777888899999886   


Q ss_pred             CCcccc
Q psy826          250 QNICIN  255 (329)
Q Consensus       250 ~~~C~~  255 (329)
                      +++|..
T Consensus       961 GGtCq~  966 (1758)
T KOG0994|consen  961 GGTCQK  966 (1758)
T ss_pred             CCcccc
Confidence            667753

>KOG4289|consensus

Probab=98.31  E-value=7.6e-07  Score=93.14  Aligned_cols=121  Identities=28%  Similarity=0.692  Sum_probs=81.1

Q ss_pred             cccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhh----ccCCc----ccCCCccceeecccccCcCCCCCCC
Q psy826           28 AKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFK----VQHSK----AKDSDLYTWLCINKLKRCCPVDHYG   99 (329)
Q Consensus        28 ~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~----~~~~~----~~~~~~~~~~C~~~~~~~C~~G~~G   99 (329)
                      +.|-.|++-+.+++|-     .+.|.++....    ...-+.    +..++    +.+.......|.      ||+||+|
T Consensus      1168 ~~sll~VlpfdDniCl-----rEPCenymkCv----svlrFdssapf~~s~s~lfRpi~pvnglrCr------CPpGFTg 1232 (2531)
T KOG4289|consen 1168 AISLLRVLPFDDNICL-----REPCENYMKCV----SVLRFDSSAPFLASDSVLFRPIHPVNGLRCR------CPPGFTG 1232 (2531)
T ss_pred             HhhheeeeeccCchhh-----cchhHHHHhhh----hheeecccCccccccceeeeeccccCceeEe------CCCCCCc
Confidence            4567888888999998     66776654332    111110    00000    011222334455      9999999


Q ss_pred             CCCc----cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC------cCCCCccccccCcCCCCCcCCcccccC
Q psy826          100 ADCK----PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN------ECNTGYFQSYKDEKTILCSKCHASCES  169 (329)
Q Consensus       100 ~~C~----~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~------~C~~g~y~~~~~~~~~~C~~C~~~C~~  169 (329)
                      ..|+    .|  ...+|.+++.|..   +.|.|+|.|.+||+|..|+      .|.+|+              |..+  +
T Consensus      1233 d~CeTeiDlC--Ys~pC~nng~C~s---rEggYtCeCrpg~tGehCEvs~~agrCvpGv--------------C~ng--g 1291 (2531)
T KOG4289|consen 1233 DYCETEIDLC--YSGPCGNNGRCRS---REGGYTCECRPGFTGEHCEVSARAGRCVPGV--------------CKNG--G 1291 (2531)
T ss_pred             ccccchhHhh--hcCCCCCCCceEE---ecCceeEEecCCccccceeeecccCccccce--------------ecCC--C
Confidence            9998    35  4478999999998   8999999999999999994      565553              4444  5


Q ss_pred             Ccc--cCCCCCCccCCCC
Q psy826          170 GCS--TGGPKGCTKCKSG  185 (329)
Q Consensus       170 ~C~--~~~~~~C~~C~~G  185 (329)
                      +|.  ..+.+.| .|+.|
T Consensus      1292 tC~~~~nggf~c-~Cp~g 1308 (2531)
T KOG4289|consen 1292 TCVNLLNGGFCC-HCPYG 1308 (2531)
T ss_pred             EEeecCCCceec-cCCCc
Confidence            676  4566778 88887

>KOG1225|consensus

Probab=98.27  E-value=2e-06  Score=84.30  Aligned_cols=40  Identities=40%  Similarity=1.115  Sum_probs=27.3

Q ss_pred             CCCCCCCCCCc--cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826           93 CPVDHYGADCK--PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus        93 C~~G~~G~~C~--~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      |+.+|+|+.|.  .|+.+   |.+++.|..       +.|+|++||+|..|+
T Consensus       238 c~~~~~g~~c~~~~C~~~---c~~~g~c~~-------G~CIC~~Gf~G~dC~  279 (525)
T KOG1225|consen  238 CPEGYFGPLCSTIYCPGG---CTGRGQCVE-------GRCICPPGFTGDDCD  279 (525)
T ss_pred             cCCceeCCccccccCCCC---CcccceEeC-------CeEeCCCCCcCCCCC
Confidence            77777777776  45443   555566664       677777777777774

>KOG0994|consensus

Probab=98.27  E-value=1.9e-06  Score=88.71  Aligned_cols=150  Identities=26%  Similarity=0.602  Sum_probs=86.8

Q ss_pred             CCCCCCCCCCccCCCC------CCCCC--CC-CcccCCCCCCCCceee-cCCCCCCCCCCcCCCCccccccCcCCCCCcC
Q psy826           93 CPVDHYGADCKPCLGF------PNVCF--GN-GKCKGNGTRKGNGQCV-CNKEYTGELCNECNTGYFQSYKDEKTILCSK  162 (329)
Q Consensus        93 C~~G~~G~~C~~C~~~------~~~C~--~~-~~C~~~~~~~gs~~C~-C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~  162 (329)
                      |.+|.||..|..|.++      +.+|.  ++ ..|.     +-++.|+ |..-.+|..|+.|.+||||+..-.....|.|
T Consensus       834 C~~g~ygrqCnqCqpG~WgFPeCr~CqCNgHA~~Cd-----~~tGaCi~CqD~T~G~~CdrCl~GyyGdP~lg~g~~CrP  908 (1758)
T KOG0994|consen  834 CRPGTYGRQCNQCQPGYWGFPECRPCQCNGHADTCD-----PITGACIDCQDSTTGHSCDRCLDGYYGDPRLGSGIGCRP  908 (1758)
T ss_pred             eccccchhhccccCCCccCCCcCccccccCcccccC-----ccccccccccccccccchhhhhccccCCcccCCCCCCCC
Confidence            8888888888877652      13443  22 2344     4457886 9888889999999999999877777777887


Q ss_pred             Cc--ccc------cCCcc---cCCCCCCccCCCCceecCCCCcccCCCCCC--CCCCCCCceeecCCCCcccCCCcCC--
Q psy826          163 CH--ASC------ESGCS---TGGPKGCTKCKSGWAADKDIGCYDINECSD--ENICSGNQFCVNTEGSYRCMQCDPS--  227 (329)
Q Consensus       163 C~--~~C------~~~C~---~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~--~~~C~~~~~C~n~~gs~~C~~C~~~--  227 (329)
                      |.  .+=      ..+|.   ......| .|.+||.|.....|.+-.-=..  +..|.. -.|.|+...+.=..|+..  
T Consensus       909 CpCP~gp~Sg~~~A~sC~~d~~t~~ivC-~C~~GY~G~RCe~CA~~~fGnP~~GGtCq~-CeC~~NiD~~d~~aCD~~TG  986 (1758)
T KOG0994|consen  909 CPCPDGPASGRQHADSCYLDTRTQQIVC-HCQEGYSGSRCEICADNHFGNPSEGGTCQK-CECSNNIDLYDPGACDVATG  986 (1758)
T ss_pred             CCCCCCCccchhccccccccccccceee-ecccCccccchhhhcccccCCcccCCcccc-ccccCCcCccCCCccchhhc
Confidence            63  100      01232   1123467 7788887765433322100000  011210 123333333333344443  


Q ss_pred             -CCCC-cCCcccccccCccccccc
Q psy826          228 -CNGC-HGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       228 -C~~C-~g~~~~~C~~C~~Gy~~~  249 (329)
                       |..| ......+|..|++||+|+
T Consensus       987 ~CLkCL~hTeG~hCe~Ck~Gf~Gd 1010 (1758)
T KOG0994|consen  987 ACLKCLYHTEGDHCEHCKDGFYGD 1010 (1758)
T ss_pred             hhhhhhhcccccchhhccccchhH
Confidence             5556 345667899999999986

>KOG1214|consensus

Probab=98.09  E-value=4.9e-06  Score=83.49  Aligned_cols=118  Identities=30%  Similarity=0.724  Sum_probs=82.4

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCC--CCC---CcCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTG--ELC---NECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKC  182 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g--~~C---~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C  182 (329)
                      .+.|..++.|.. + +.-.|+|.|..||.|  ..|   .+|+.++         .+|.   +.  ..|+ .+++++| .|
T Consensus       699 sh~cdt~a~C~p-g-~~~~~tcecs~g~~gdgr~c~d~~eca~~~---------~~CG---p~--s~Cin~pg~~rc-eC  761 (1289)
T KOG1214|consen  699 SHMCDTTARCHP-G-TGVDYTCECSSGYQGDGRNCVDENECATGF---------HRCG---PN--SVCINLPGSYRC-EC  761 (1289)
T ss_pred             CcccCCCccccC-C-CCcceEEEEeeccCCCCCCCCChhhhccCC---------CCCC---CC--ceeecCCCceeE-EE
Confidence            344556666763 2 234589999999985  466   3455432         2233   22  3566 7889999 99


Q ss_pred             CCCceecCC-CCcc------cCCCCCCC-CCCCCCc--eeecCC-CCcccCCCcCCCCCCcCCcccccccCcccccccCC
Q psy826          183 KSGWAADKD-IGCY------DINECSDE-NICSGNQ--FCVNTE-GSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQN  251 (329)
Q Consensus       183 ~~G~~~~~~-~~C~------d~~eC~~~-~~C~~~~--~C~n~~-gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~  251 (329)
                      ..||...++ .+|+      .++.|..+ +.|...+  .|+... ++|.|.                   |-+||.|++.
T Consensus       762 ~~gy~F~dd~~tCV~i~~pap~n~Ce~g~h~C~i~g~a~c~~hGgs~y~C~-------------------CLPGfsGDG~  822 (1289)
T KOG1214|consen  762 RSGYEFADDRHTCVLITPPAPANPCEDGSHTCAIAGQARCVHHGGSTYSCA-------------------CLPGFSGDGH  822 (1289)
T ss_pred             eecceeccCCcceEEecCCCCCCccccCccccCcCCceEEEecCCceEEEe-------------------ecCCccCCcc
Confidence            999998776 4586      35668877 7787544  444444 468998                   9999999999


Q ss_pred             cccccCcCCCC
Q psy826          252 ICINTQAKSQN  262 (329)
Q Consensus       252 ~C~~~~~~~~~  262 (329)
                      .|.++++|..+
T Consensus       823 ~c~dvDeC~ps  833 (1289)
T KOG1214|consen  823 QCTDVDECSPS  833 (1289)
T ss_pred             ccccccccCcc
Confidence            99999988754

>KOG1217|consensus

Probab=98.07  E-value=2.5e-05  Score=76.22  Aligned_cols=123  Identities=29%  Similarity=0.755  Sum_probs=85.1

Q ss_pred             cCCCCCCCCCCc----cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCCc--------------CCCCcccccc
Q psy826           92 CCPVDHYGADCK----PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNE--------------CNTGYFQSYK  153 (329)
Q Consensus        92 ~C~~G~~G~~C~----~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~--------------C~~g~y~~~~  153 (329)
                      .|..||.+..|.    .|.....+|.+.+.|.+   ..+++.|.|.+||.+..|..              ++.++.+...
T Consensus       155 ~C~~g~~~~~~~~~~~~C~~~~~~c~~~~~C~~---~~~~~~C~c~~~~~~~~~~~~~~~~~c~~~~~~~~~~g~~~~~c  231 (487)
T KOG1217|consen  155 SCTEGYEGEPCETDLDECIQYSSPCQNGGTCVN---TGGSYLCSCPPGYTGSTCETTGNGGTCVDSVACSCPPGARGPEC  231 (487)
T ss_pred             eeCCCcccccccccccccccCCCCcCCCccccc---CCCCeeEeCCCCccCCcCcCCCCCceEecceeccCCCCCCCCCc
Confidence            399999988776    56555567988899998   67779999999999887742              2333322111


Q ss_pred             CcCCCCCcCCcccccCCcc-cCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccC
Q psy826          154 DEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCM  222 (329)
Q Consensus       154 ~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~  222 (329)
                      .....   .|... .+.|. ..+.+.| .|++||.+.....|.++++|.....|.++..|++..++|.|.
T Consensus       232 ~~~~~---~~~~~-~~~c~~~~~~~~C-~~~~g~~~~~~~~~~~~~~C~~~~~c~~~~~C~~~~~~~~C~  296 (487)
T KOG1217|consen  232 EVSIV---ECASG-DGTCVNTVGSYTC-RCPEGYTGDACVTCVDVDSCALIASCPNGGTCVNVPGSYRCT  296 (487)
T ss_pred             ccccc---cccCC-CCcccccCCceee-eCCCCccccccceeeeccccCCCCccCCCCeeecCCCcceee
Confidence            11111   11100 02454 4566899 999999987633578899999862388889999999889997

>KOG1225|consensus

Probab=98.02  E-value=1.1e-05  Score=79.14  Aligned_cols=96  Identities=34%  Similarity=0.936  Sum_probs=69.6

Q ss_pred             cCcCCCCCCCCCCcc--CCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC--cCCCCccccccCcCCCCCcCCcc
Q psy826           90 KRCCPVDHYGADCKP--CLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN--ECNTGYFQSYKDEKTILCSKCHA  165 (329)
Q Consensus        90 ~~~C~~G~~G~~C~~--C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~--~C~~g~y~~~~~~~~~~C~~C~~  165 (329)
                      .+.|++||+|.+|.+  ||..   |++++.|.+       +.|+|++||.|..|.  .|+.               .|++
T Consensus       266 ~CIC~~Gf~G~dC~e~~Cp~~---cs~~g~~~~-------g~CiC~~g~~G~dCs~~~cpa---------------dC~g  320 (525)
T KOG1225|consen  266 RCICPPGFTGDDCDELVCPVD---CSGGGVCVD-------GECICNPGYSGKDCSIRRCPA---------------DCSG  320 (525)
T ss_pred             eEeCCCCCcCCCCCcccCCcc---cCCCceecC-------CEeecCCCccccccccccCCc---------------cCCC
Confidence            345999999999995  7653   887787775       599999999999883  3332               2444


Q ss_pred             cccCCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccc
Q psy826          166 SCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEG  245 (329)
Q Consensus       166 ~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~G  245 (329)
                      .  +.|.   ..+| .|.+||.|..         |... .|+++..|+|    . |.                   |..|
T Consensus       321 ~--G~Ci---~G~C-~C~~Gy~G~~---------C~~~-~C~~~g~cv~----g-C~-------------------C~~G  360 (525)
T KOG1225|consen  321 H--GKCI---DGEC-LCDEGYTGEL---------CIQR-ACSGGGQCVN----G-CK-------------------CKKG  360 (525)
T ss_pred             C--Cccc---CCce-EeCCCCcCCc---------cccc-ccCCCceecc----C-ce-------------------eccC
Confidence            3  4554   3689 9999999875         3332 3766777764    2 77                   9999


Q ss_pred             ccccC
Q psy826          246 YKLQQ  250 (329)
Q Consensus       246 y~~~~  250 (329)
                      |.+.+
T Consensus       361 w~G~d  365 (525)
T KOG1225|consen  361 WRGPD  365 (525)
T ss_pred             ccCCC
Confidence            99875

>PF14843 GF_recep_IV: Growth factor receptor domain IV; PDB: 1N8Z_C 1S78_A 3N85_A 2A91_A 3MZW_A 3BE1_A 3U2P_A 2AHX_B 3LTF_A 3I2T_A

Probab=97.95  E-value=4.1e-06  Score=68.22  Aligned_cols=104  Identities=27%  Similarity=0.740  Sum_probs=61.3

Q ss_pred             CCCceee-cCCCCCCCCC-CcCCCCccccccCcCCCCCcCCccccc-----CCcccCCCCCCccCCCCceecCCCCcccC
Q psy826          125 KGNGQCV-CNKEYTGELC-NECNTGYFQSYKDEKTILCSKCHASCE-----SGCSTGGPKGCTKCKSGWAADKDIGCYDI  197 (329)
Q Consensus       125 ~gs~~C~-C~~G~~g~~C-~~C~~g~y~~~~~~~~~~C~~C~~~C~-----~~C~~~~~~~C~~C~~G~~~~~~~~C~d~  197 (329)
                      ++...|+ |.....+..| ..|+.++|..........|.+||..|.     .+|.+++...|+.|.. |..  ...|   
T Consensus        14 p~~~~C~sC~~~~~~g~Cv~~C~~~~~~~~~~~~~~~C~~Ch~~C~~~~~~~~C~Gp~~~~C~~C~~-~~~--~~~C---   87 (132)
T PF14843_consen   14 PGPDQCLSCRNFSFNGTCVASCPDGYYFDGSYEDSNTCQPCHPECLPSNGSETCTGPGADQCLSCAH-FRD--GGQC---   87 (132)
T ss_dssp             SSTTCBSSBSSEEETTEEESSTSSSSSSSSEEEETTEEEE--TTB---TTSSSBSSSSTTTBSSBSS-EEE--TTEE---
T ss_pred             cChhhccCccCcccCCcchhhcccccccccccccCCcCcccChhhCccccCcCcCCCCcchhhhccc-cCC--CCcc---
Confidence            3334443 4433334555 788876442111123678999999992     4999999999999986 432  2334   


Q ss_pred             CCCCCCCCCCCCce-------eecCCCCcccCCCcCCC-CCCcCCcccccc
Q psy826          198 NECSDENICSGNQF-------CVNTEGSYRCMQCDPSC-NGCHGDGPDMCE  240 (329)
Q Consensus       198 ~eC~~~~~C~~~~~-------C~n~~gs~~C~~C~~~C-~~C~g~~~~~C~  240 (329)
                         +.  .|+.+.+       ... .....|.+||+.| ..|+||.+.+|.
T Consensus        88 ---v~--~CP~~~~~~~~~~~~~~-~~~~~C~~Ch~~C~~gC~Gp~~~~C~  132 (132)
T PF14843_consen   88 ---VS--SCPEGTYGENFPIYYYP-DSNGVCQPCHPSCTQGCTGPSASDCQ  132 (132)
T ss_dssp             ---ES--S--EEEEBTTSEEEEEE--TTSBEEE-STTSTT-BSSSSTTCC-
T ss_pred             ---cC--cCCCCCccccccceecC-CCCCccCCcCccccCcCCCCCcccCC
Confidence               43  6776631       112 3356899999999 899999988873

...

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=97.93  E-value=4.6e-06  Score=53.78  Aligned_cols=34  Identities=56%  Similarity=1.188  Sum_probs=31.4

Q ss_pred             cCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccc
Q psy826          196 DINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKL  248 (329)
Q Consensus       196 d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~  248 (329)
                      |||||... +.|+.++.|+|+.|+|.|.                   |++||..
T Consensus         1 DidEC~~~~~~C~~~~~C~N~~Gsy~C~-------------------C~~Gy~~   35 (42)
T PF07645_consen    1 DIDECAEGPHNCPENGTCVNTEGSYSCS-------------------CPPGYEL   35 (42)
T ss_dssp             ESSTTTTTSSSSSTTSEEEEETTEEEEE-------------------ESTTEEE
T ss_pred             CccccCCCCCcCCCCCEEEcCCCCEEee-------------------CCCCcEE
Confidence            68999987 7898899999999999999                   9999984

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>PTZ00214 high cysteine membrane protein Group 4; Provisional

Probab=97.72  E-value=0.00027  Score=73.51  Aligned_cols=62  Identities=29%  Similarity=0.741  Sum_probs=43.4

Q ss_pred             CCceee-cCCCCCC--------CCC---CcCCCCccccccCcCCCCCcCCc-ccccCCcccCCCCCCccCCCCceecCCC
Q psy826          126 GNGQCV-CNKEYTG--------ELC---NECNTGYFQSYKDEKTILCSKCH-ASCESGCSTGGPKGCTKCKSGWAADKDI  192 (329)
Q Consensus       126 gs~~C~-C~~G~~g--------~~C---~~C~~g~y~~~~~~~~~~C~~C~-~~C~~~C~~~~~~~C~~C~~G~~~~~~~  192 (329)
                      +...|. |..+|.-        ..|   ..|.+|||.   +  ...|.+|+ .+|+ +|..  ...|+.|..+|++..++
T Consensus       590 ~~~~C~sC~~g~yL~~~~~~~~g~Cv~~~~C~~GYY~---d--~~~C~~C~~~~C~-tC~~--~~~C~~C~~~~~ls~~~  661 (800)
T PTZ00214        590 GPGRCTRCPSDKLLKRASGAATGSCVDPGACVDGYYA---D--GDACLPCATPGCK-TCGH--ASFCTECAGELFVSLDG  661 (800)
T ss_pred             CCCcceECCCCCEeccccccccccccCcccCCCCccc---C--CCccccCCccccc-cccC--CCCcCcCCCCceecCcC
Confidence            345564 7777742        134   489999994   3  24699999 7998 8863  35899999998886644


Q ss_pred             C-cc
Q psy826          193 G-CY  195 (329)
Q Consensus       193 ~-C~  195 (329)
                      . |+
T Consensus       662 ~~C~  665 (800)
T PTZ00214        662 QSCL  665 (800)
T ss_pred             Cchh
Confidence            3 64

>KOG4289|consensus

Probab=97.71  E-value=3.6e-05  Score=81.19  Aligned_cols=92  Identities=24%  Similarity=0.687  Sum_probs=66.7

Q ss_pred             CCCceeecCCCCCCCCCC----cCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccCCCCceecCCCCcccCCC
Q psy826          125 KGNGQCVCNKEYTGELCN----ECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWAADKDIGCYDINE  199 (329)
Q Consensus       125 ~gs~~C~C~~G~~g~~C~----~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~d~~e  199 (329)
                      .+..+|.|++||+|+.|+    .|-.              .+|.++  ++|. ..++|.| .|.+||.|..+..=...-.
T Consensus      1219 vnglrCrCPpGFTgd~CeTeiDlCYs--------------~pC~nn--g~C~srEggYtC-eCrpg~tGehCEvs~~agr 1281 (2531)
T KOG4289|consen 1219 VNGLRCRCPPGFTGDYCETEIDLCYS--------------GPCGNN--GRCRSREGGYTC-ECRPGFTGEHCEVSARAGR 1281 (2531)
T ss_pred             cCceeEeCCCCCCcccccchhHhhhc--------------CCCCCC--CceEEecCceeE-EecCCccccceeeecccCc
Confidence            567899999999999993    4433              356555  5777 7788999 9999999976431112223


Q ss_pred             CCCCCCCCCCceeecCC-CCcccCCCcCCCCCCcCCcccccccCcccccccCCccc
Q psy826          200 CSDENICSGNQFCVNTE-GSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICI  254 (329)
Q Consensus       200 C~~~~~C~~~~~C~n~~-gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~  254 (329)
                      |.. +.|.++..|++.. |.+.|.                   |+.| .-.+..|.
T Consensus      1282 Cvp-GvC~nggtC~~~~nggf~c~-------------------Cp~g-e~e~prC~ 1316 (2531)
T KOG4289|consen 1282 CVP-GVCKNGGTCVNLLNGGFCCH-------------------CPYG-EFEDPRCE 1316 (2531)
T ss_pred             ccc-ceecCCCEEeecCCCceecc-------------------CCCc-ccCCCceE
Confidence            555 6899999999886 778888                   9988 44455665

>KOG1836|consensus

Probab=97.65  E-value=0.0002  Score=79.17  Aligned_cols=96  Identities=25%  Similarity=0.516  Sum_probs=63.2

Q ss_pred             CcCCCCCCCCCCccCCCC-------------CCCCCCCC---cccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccC
Q psy826           91 RCCPVDHYGADCKPCLGF-------------PNVCFGNG---KCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKD  154 (329)
Q Consensus        91 ~~C~~G~~G~~C~~C~~~-------------~~~C~~~~---~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~  154 (329)
                      +.|++||.|..|+.|.++             +-+|.-++   +|.     ..++.|.|.+...|..|+.|.+|||+....
T Consensus       697 c~C~~g~tG~~Ce~C~~gfrr~~~~~~~~~~c~~C~cngh~~~Cd-----~~tG~C~C~~~t~G~~C~~C~~GfYg~~~~  771 (1705)
T KOG1836|consen  697 CTCPVGYTGQFCESCAPGFRRLSPQLGPFCPCIPCDCNGHSNICD-----PRTGQCKCKHNTFGGQCAQCVDGFYGLPDL  771 (1705)
T ss_pred             ccCCCCcccchhhhcchhhhcccccCCCCCcccccccCCcccccc-----CCCCceecccCCCCCchhhhcCCCCCcccc
Confidence            349999999999988542             01233222   343     567899999999999999999999986555


Q ss_pred             cCCCCCcCCc--c--cccCCcccCCCCCCccCCCCceecCCC
Q psy826          155 EKTILCSKCH--A--SCESGCSTGGPKGCTKCKSGWAADKDI  192 (329)
Q Consensus       155 ~~~~~C~~C~--~--~C~~~C~~~~~~~C~~C~~G~~~~~~~  192 (329)
                      .....|.+|+  .  .|..++. .....|+.|++||+|....
T Consensus       772 ~~~~dC~~C~Cp~~~~~~~~~~-~~~~iCk~Cp~gytG~rCe  812 (1705)
T KOG1836|consen  772 GTSGDCQPCPCPNGGACGQTPE-ILEVVCKNCPPGYTGLRCE  812 (1705)
T ss_pred             CCCCCCccCCCCCChhhcCcCc-ccceecCCCCCCCcccccc
Confidence            4444577664  2  2222221 3346775577777776643

>KOG1219|consensus

Probab=97.61  E-value=5.2e-05  Score=83.00  Aligned_cols=81  Identities=30%  Similarity=0.706  Sum_probs=62.5

Q ss_pred             CCCCCCCCCCc----cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcCCCCCcCCccccc
Q psy826           93 CPVDHYGADCK----PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCE  168 (329)
Q Consensus        93 C~~G~~G~~C~----~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~  168 (329)
                      ||+-|.|..|+    +|.  ++||..+++|..   ..+.|.|.|+.||+|..|+.  .|     .++++.  .+|..+  
T Consensus      3890 CpsqysG~~CEi~~epC~--snPC~~GgtCip---~~n~f~CnC~~gyTG~~Ce~--~G-----i~eCs~--n~C~~g-- 3953 (4289)
T KOG1219|consen 3890 CPSQYSGNHCEIDLEPCA--SNPCLTGGTCIP---FYNGFLCNCPNGYTGKRCEA--RG-----ISECSK--NVCGTG-- 3953 (4289)
T ss_pred             CcccccCccccccccccc--CCCCCCCCEEEe---cCCCeeEeCCCCccCceeec--cc-----cccccc--ccccCC--
Confidence            99999999998    674  478999999997   67789999999999999942  11     122111  245555  


Q ss_pred             CCcc-cCCCCCCccCCCCceecC
Q psy826          169 SGCS-TGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       169 ~~C~-~~~~~~C~~C~~G~~~~~  190 (329)
                      +.|. .+|++.| .|-+||.|..
T Consensus      3954 g~C~n~~gsf~C-ncT~g~~gr~ 3975 (4289)
T KOG1219|consen 3954 GQCINIPGSFHC-NCTPGILGRT 3975 (4289)
T ss_pred             ceeeccCCceEe-ccChhHhccc
Confidence            6787 7889999 9999998765

>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein)

Probab=97.52  E-value=0.00032  Score=67.59  Aligned_cols=33  Identities=33%  Similarity=0.962  Sum_probs=29.9

Q ss_pred             CcccCCCcCCCCCCcCCcccccccCcccccccC
Q psy826          218 SYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQ  250 (329)
Q Consensus       218 s~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~  250 (329)
                      +..|.+||+.|..|+++.+.+|++|++||.+..
T Consensus       104 ~~~C~~C~~~C~~C~~~~~~~Ct~C~~g~~L~~  136 (397)
T PF03302_consen  104 GNKCVPCHESCATCSGGAPNQCTSCKPGKVLKY  136 (397)
T ss_pred             CCCCCCCCccccccCCCCCCCCcccCCCccccc
Confidence            458999999999999999999999999998763

>PTZ00214 high cysteine membrane protein Group 4; Provisional

Probab=97.49  E-value=0.00041  Score=72.16  Aligned_cols=106  Identities=24%  Similarity=0.625  Sum_probs=69.0

Q ss_pred             CCCcCCCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCc
Q psy826          140 LCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSY  219 (329)
Q Consensus       140 ~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~  219 (329)
                      .|..|.+|||.   + ....|..|+.+|. .|.+++...|++|..+|++..... .....|.....|..+.|  .  ...
T Consensus       560 ~Ct~C~~GYyl---~-~~~~C~~Cd~~C~-~C~~~~~~~C~sC~~g~yL~~~~~-~~~g~Cv~~~~C~~GYY--~--d~~  629 (800)
T PTZ00214        560 KCTTTKKGYGI---S-PDGKLLECDPTCL-ACTAPGPGRCTRCPSDKLLKRASG-AATGSCVDPGACVDGYY--A--DGD  629 (800)
T ss_pred             cccccccCccc---C-CCCccccccchhh-hccCCCCCcceECCCCCEeccccc-cccccccCcccCCCCcc--c--CCC
Confidence            56788999984   2 2245889999998 898877889999999999875211 11112322135555555  1  234


Q ss_pred             ccCCCc-CCCCCCcCCcccccccCccccccc--CCcccccC
Q psy826          220 RCMQCD-PSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQ  257 (329)
Q Consensus       220 ~C~~C~-~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~  257 (329)
                      .|.+|+ +.|..|..  ...|++|..+|++.  +..|+..+
T Consensus       630 ~C~~C~~~~C~tC~~--~~~C~~C~~~~~ls~~~~~C~~~C  668 (800)
T PTZ00214        630 ACLPCATPGCKTCGH--ASFCTECAGELFVSLDGQSCLEEC  668 (800)
T ss_pred             ccccCCccccccccC--CCCcCcCCCCceecCcCCchhhcC
Confidence            788998 68888864  34788887776643  34455433

>PF14843 GF_recep_IV: Growth factor receptor domain IV; PDB: 1N8Z_C 1S78_A 3N85_A 2A91_A 3MZW_A 3BE1_A 3U2P_A 2AHX_B 3LTF_A 3I2T_A

Probab=97.49  E-value=7.4e-05  Score=60.81  Aligned_cols=85  Identities=29%  Similarity=0.840  Sum_probs=54.6

Q ss_pred             Cccccc-CCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeec-CCCCcccCCCcCCC------CCCcCC
Q psy826          163 CHASCE-SGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVN-TEGSYRCMQCDPSC------NGCHGD  234 (329)
Q Consensus       163 C~~~C~-~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n-~~gs~~C~~C~~~C------~~C~g~  234 (329)
                      ||+.|. .+|+++++..|+.|+. |...  +.|+      .  .|+...+=.+ ......|.+||+.|      .+|+||
T Consensus         2 C~~~C~~~gC~Gp~~~~C~sC~~-~~~~--g~Cv------~--~C~~~~~~~~~~~~~~~C~~Ch~~C~~~~~~~~C~Gp   70 (132)
T PF14843_consen    2 CHPQCASDGCWGPGPDQCLSCRN-FSFN--GTCV------A--SCPDGYYFDGSYEDSNTCQPCHPECLPSNGSETCTGP   70 (132)
T ss_dssp             -CTTBGTT-BSSSSTTCBSSBSS-EEET--TEEE------S--STSSSSSSSSEEEETTEEEE--TTB---TTSSSBSSS
T ss_pred             cccccCCCCccCcChhhccCccC-cccC--Ccch------h--hcccccccccccccCCcCcccChhhCccccCcCcCCC
Confidence            455554 4789999999999985 4443  4454      2  5543311000 11267899999999      999999


Q ss_pred             cccccccCcccccccCCcccccCcCC
Q psy826          235 GPDMCEACAEGYKLQQNICINTQAKS  260 (329)
Q Consensus       235 ~~~~C~~C~~Gy~~~~~~C~~~~~~~  260 (329)
                      ++.+|++|+. | .+++.|+..++..
T Consensus        71 ~~~~C~~C~~-~-~~~~~Cv~~CP~~   94 (132)
T PF14843_consen   71 GADQCLSCAH-F-RDGGQCVSSCPEG   94 (132)
T ss_dssp             STTTBSSBSS-E-EETTEEESS--EE
T ss_pred             Ccchhhhccc-c-CCCCcccCcCCCC
Confidence            9999999996 3 3577898776544

...

>KOG1836|consensus

Probab=97.31  E-value=0.00085  Score=74.29  Aligned_cols=92  Identities=33%  Similarity=0.764  Sum_probs=61.3

Q ss_pred             cCCCCCCCC-------CCccCCCCCCCCCCCCcccCCCCCCCCceee-cCCCCCCCCCCcCCCCccccccCcC--CCCCc
Q psy826           92 CCPVDHYGA-------DCKPCLGFPNVCFGNGKCKGNGTRKGNGQCV-CNKEYTGELCNECNTGYFQSYKDEK--TILCS  161 (329)
Q Consensus        92 ~C~~G~~G~-------~C~~C~~~~~~C~~~~~C~~~~~~~gs~~C~-C~~G~~g~~C~~C~~g~y~~~~~~~--~~~C~  161 (329)
                      .|..||||.       +|++|+     |.+.+.|.... ....+.|. |++||+|..|+.|.+|||+......  ...|.
T Consensus       760 ~C~~GfYg~~~~~~~~dC~~C~-----Cp~~~~~~~~~-~~~~~iCk~Cp~gytG~rCe~c~dgyfg~p~~~~~~~~~c~  833 (1705)
T KOG1836|consen  760 QCVDGFYGLPDLGTSGDCQPCP-----CPNGGACGQTP-EILEVVCKNCPPGYTGLRCEECADGYFGNPLGHDGDVRPCQ  833 (1705)
T ss_pred             hhcCCCCCccccCCCCCCccCC-----CCCChhhcCcC-cccceecCCCCCCCcccccccCCCccccCCCCCCCCcccCc
Confidence            378888843       377664     44445565422 14568898 9999999999999999998554332  34455


Q ss_pred             CCc-----------------ccccCCcc-cCCCCCCccCCCCceecC
Q psy826          162 KCH-----------------ASCESGCS-TGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       162 ~C~-----------------~~C~~~C~-~~~~~~C~~C~~G~~~~~  190 (329)
                      +|.                 ..|. .|. +.....|..|.+||.+++
T Consensus       834 ~c~c~~n~dp~~~g~c~~~tg~c~-~ci~nT~g~~cd~c~~g~~gd~  879 (1705)
T KOG1836|consen  834 SCQCNFNVDPNAFGNCNRLTGECL-KCIHNTAGEYCDLCKEGYFGDP  879 (1705)
T ss_pred             cceeccccCcccccccccccccee-eccCCcccccccccccCccccc
Confidence            442                 1232 344 344568889999999876

>PF03302 VSP: Giardia variant-specific surface protein; InterPro: IPR005127 During infection, the intestinal protozoan parasite Giardia lamblia virus undergoes continuous antigenic variation which is determined by diversification of the parasite's major surface antigen, named VSP (variant surface protein)

Probab=97.28  E-value=0.0024  Score=61.69  Aligned_cols=106  Identities=34%  Similarity=0.826  Sum_probs=66.2

Q ss_pred             CCCcCCCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceecCC-----CCcccCCCCCCC---CCCCCCce
Q psy826          140 LCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKD-----IGCYDINECSDE---NICSGNQF  211 (329)
Q Consensus       140 ~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~-----~~C~d~~eC~~~---~~C~~~~~  211 (329)
                      .|..|++|||.     ....|.+||.+|. +|.+.....|+.|.+||.+...     ..|.  .+|...   ..|.   .
T Consensus        92 ~c~~C~~G~y~-----~~~~C~~C~~~C~-~C~~~~~~~Ct~C~~g~~L~~~~~~~~~tC~--~~c~~~~~~g~C~---~  160 (397)
T PF03302_consen   92 CCSECPDGYYK-----NGNKCVPCHESCA-TCSGGAPNQCTSCKPGKVLKYGTDGTKGTCG--AECTEDCASGACK---A  160 (397)
T ss_pred             cccCCCCCccc-----cCCCCCCCCcccc-ccCCCCCCCCcccCCCcccccccCCCcCccc--cccccccccCCcC---e
Confidence            56899999994     3457999999998 9997777899999999988762     1232  233322   2231   2


Q ss_pred             eec-CCCCcccCCCcCC-----CCC-----------Cc--CCcccccccCcccccccCCccccc
Q psy826          212 CVN-TEGSYRCMQCDPS-----CNG-----------CH--GDGPDMCEACAEGYKLQQNICINT  256 (329)
Q Consensus       212 C~n-~~gs~~C~~C~~~-----C~~-----------C~--g~~~~~C~~C~~Gy~~~~~~C~~~  256 (329)
                      |.- ..+...|.+|...     -..           |.  ......|++|..+|+|..+-|...
T Consensus       161 C~~~i~g~~yCs~C~~~~~~PinG~C~~~~~~~~~~C~~~~~~~G~Ct~C~~~yFl~~GGCY~~  224 (397)
T PF03302_consen  161 CGATIGGTKYCSQCKTGTEVPINGVCTSNTARATATCTDGTASDGTCTSCTDGYFLYKGGCYST  224 (397)
T ss_pred             eeeEeCCccccccCCCCCcCCcCCccCCCccccccccccccCCCCcccccccchhhhcCccccc
Confidence            221 2244556666533     122           22  223467888888888765555443

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=97.09  E-value=0.0002  Score=44.40  Aligned_cols=31  Identities=42%  Similarity=0.885  Sum_probs=25.4

Q ss_pred             CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCcc
Q psy826          204 NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNIC  253 (329)
Q Consensus       204 ~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C  253 (329)
                      +.|++++.|+++.++++|.                   |++||.+++..|
T Consensus         6 ~~C~~nA~C~~~~~~~~C~-------------------C~~Gy~GdG~~C   36 (36)
T PF12947_consen    6 GGCHPNATCTNTGGSYTCT-------------------CKPGYEGDGFFC   36 (36)
T ss_dssp             GGS-TTCEEEE-TTSEEEE-------------------E-CEEECCSTCE
T ss_pred             CCCCCCcEeecCCCCEEeE-------------------CCCCCccCCcCC
Confidence            5788899999999999999                   999999998765

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>cd00064 FU Furin-like repeats

Probab=97.03  E-value=0.00054  Score=45.53  Aligned_cols=38  Identities=37%  Similarity=1.039  Sum_probs=33.5

Q ss_pred             CCcCCCCCCcCCcccccccCcccccccCCcccccCcCC
Q psy826          223 QCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKS  260 (329)
Q Consensus       223 ~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~~~~~~  260 (329)
                      +||+.|.+|+++++..|++|+.||.+++++|++.++..
T Consensus         1 ~C~~~C~~C~g~~~~~C~~C~~~~~~~~~~Cv~~C~~~   38 (49)
T cd00064           1 PCHPSCATCTGPGPDQCTSCRHGFYLDGGTCVSECPEG   38 (49)
T ss_pred             CCCCccCCCcCcCcCcCccCcCccCCCCCcccccCCCC
Confidence            58999999999999999999999999899999865443

Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=96.96  E-value=0.00042  Score=38.67  Aligned_cols=23  Identities=35%  Similarity=0.771  Sum_probs=19.1

Q ss_pred             CCCCccCCCCceecCCC-CcccCCC
Q psy826          176 PKGCTKCKSGWAADKDI-GCYDINE  199 (329)
Q Consensus       176 ~~~C~~C~~G~~~~~~~-~C~d~~e  199 (329)
                      +|.| .|++||.+.+++ .|+||||
T Consensus         1 sy~C-~C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    1 SYTC-SCPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CEEe-eCCCCCcCCCCCCccccCCC
Confidence            4789 999999987654 5999986

>smart00261 FU Furin-like repeats

Probab=96.95  E-value=0.00085  Score=43.89  Aligned_cols=39  Identities=36%  Similarity=1.009  Sum_probs=34.7

Q ss_pred             cccCCCcCCCCCCcCCcccccccCcccccccCCcccccC
Q psy826          219 YRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQ  257 (329)
Q Consensus       219 ~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~~~  257 (329)
                      ..|.+|++.|..|.++++..|++|..||.+..+.|+..+
T Consensus         2 ~~C~~C~~~C~~C~~~~~~~C~~C~~~~~l~~~~Cv~~C   40 (46)
T smart00261        2 GECKPCHPECATCTGPGPDDCTSCKHGFFLDGGTCVSEC   40 (46)
T ss_pred             CccccccccccccCCcCcCcCccCCcccCCCCCCccCcC
Confidence            358899999999999999999999999999888888744

>KOG1217|consensus

Probab=96.88  E-value=0.0058  Score=59.51  Aligned_cols=133  Identities=33%  Similarity=0.727  Sum_probs=84.5

Q ss_pred             cCCCCCCCCCC------ccCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcCC--CCCcCC
Q psy826           92 CCPVDHYGADC------KPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKT--ILCSKC  163 (329)
Q Consensus        92 ~C~~G~~G~~C------~~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~--~~C~~C  163 (329)
                      .|++||.+..+      ..|..... |.+++.|.+   ..+.+.|.|++||.|..|..|...      +...  ..-.+|
T Consensus       255 ~~~~g~~~~~~~~~~~~~~C~~~~~-c~~~~~C~~---~~~~~~C~C~~g~~g~~~~~~~~~------~~C~~~~~~~~c  324 (487)
T KOG1217|consen  255 RCPEGYTGDACVTCVDVDSCALIAS-CPNGGTCVN---VPGSYRCTCPPGFTGRLCTECVDV------DECSPRNAGGPC  324 (487)
T ss_pred             eCCCCccccccceeeeccccCCCCc-cCCCCeeec---CCCcceeeCCCCCCCCCCcccccc------ccccccccCCcC
Confidence            37889987763      35655443 888899997   566699999999999987222211      0000  011224


Q ss_pred             cccccCCcc---cCCCCCCccCCCCceecCCCCcccCC-CCCCCCCCCCCceeec-CCCCcccCCCcCCCCCCcCCcccc
Q psy826          164 HASCESGCS---TGGPKGCTKCKSGWAADKDIGCYDIN-ECSDENICSGNQFCVN-TEGSYRCMQCDPSCNGCHGDGPDM  238 (329)
Q Consensus       164 ~~~C~~~C~---~~~~~~C~~C~~G~~~~~~~~C~d~~-eC~~~~~C~~~~~C~n-~~gs~~C~~C~~~C~~C~g~~~~~  238 (329)
                      ..+  ..|.   ..+.+.| .|..||.+   ..|++.+ +|.. ..|..+..|.+ ..+++.|.                
T Consensus       325 ~~g--~~C~~~~~~~~~~C-~c~~~~~g---~~C~~~~~~C~~-~~~~~~~~c~~~~~~~~~c~----------------  381 (487)
T KOG1217|consen  325 ANG--GTCNTLGSFGGFRC-ACGPGFTG---RRCEDSNDECAS-SPCCPGGTCVNETPGSYRCA----------------  381 (487)
T ss_pred             CCC--cccccCCCCCCCCc-CCCCCCCC---CccccCCccccC-CccccCCEeccCCCCCeEec----------------
Confidence            433  2442   3345678 88888544   4577774 8887 34677888998 68899998                


Q ss_pred             cccCccccccc----CCcccccCcCC
Q psy826          239 CEACAEGYKLQ----QNICINTQAKS  260 (329)
Q Consensus       239 C~~C~~Gy~~~----~~~C~~~~~~~  260 (329)
                         |+.+|.+.    ...+.+..++.
T Consensus       382 ---~~~~~~~~~~~~~~~~~~~~~c~  404 (487)
T KOG1217|consen  382 ---CPAGFAGKANGDGVGCEDIDECS  404 (487)
T ss_pred             ---CCCccccCCcccccccccccccc
Confidence               88887752    23455555554

>PF07645 EGF_CA: Calcium-binding EGF domain; InterPro: IPR001881 A sequence of about forty amino-acid residues found in epidermal growth factor (EGF) has been shown [, , , , , ] to be present in a large number of membrane-bound and extracellular, mostly animal, proteins

Probab=96.56  E-value=0.0009  Score=42.97  Aligned_cols=31  Identities=32%  Similarity=0.754  Sum_probs=27.2

Q ss_pred             cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCC
Q psy826          104 PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYT  137 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~  137 (329)
                      +|....+.|..++.|+|   +.|+|.|.|++||.
T Consensus         4 EC~~~~~~C~~~~~C~N---~~Gsy~C~C~~Gy~   34 (42)
T PF07645_consen    4 ECAEGPHNCPENGTCVN---TEGSYSCSCPPGYE   34 (42)
T ss_dssp             TTTTTSSSSSTTSEEEE---ETTEEEEEESTTEE
T ss_pred             ccCCCCCcCCCCCEEEc---CCCCEEeeCCCCcE
Confidence            56666678988999999   99999999999997

Many of these proteins require calcium for their biological function and a calcium-binding site has been found at the N terminus of some EGF-like domains []. Calcium-binding may be crucial for numerous protein-protein interactions. For human coagulation factor IX it has been shown [] that the calcium-ligands form a pentagonal bipyramid. The first, third and fourth conserved negatively charged or polar residues are side chain ligands. The latter is possibly hydroxylated (see aspartic acid and asparagine hydroxylation site) []. A conserved aromatic residue, as well as the second conserved negative residue, are thought to be involved in stabilising the calcium-binding site. As in non-calcium binding EGF-like domains, there are six conserved cysteines and the structure of both types is very similar as calcium-binding induces only strictly local structural changes []. +------------------+ +---------+ | | | | nxnnC-x(3,14)-C-x(3,7)-CxxbxxxxaxC-x(1,6)-C-x(8,13)-Cx | | +------------------+ 'n': negatively charged or polar residue [DEQN] 'b': possibly beta-hydroxylated residue [DN] 'a': aromatic amino acid 'C': cysteine, involved in disulphide bond 'x': any amino acid. ; GO: 0005509 calcium ion binding; PDB: 2VJ3_A 1TOZ_A 1LMJ_A 1UZQ_A 1UZK_A 1UZJ_B 1UZP_A 1EMO_A 1EMN_A 2RR0_A ....

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=96.48  E-value=0.0031  Score=39.20  Aligned_cols=33  Identities=55%  Similarity=1.142  Sum_probs=26.7

Q ss_pred             cCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccc
Q psy826          196 DINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYK  247 (329)
Q Consensus       196 d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~  247 (329)
                      ++++|....+|..+..|+++.++|.|.                   |++||.
T Consensus         1 d~~~C~~~~~C~~~~~C~~~~g~~~C~-------------------C~~g~~   33 (39)
T smart00179        1 DIDECASGNPCQNGGTCVNTVGSYRCE-------------------CPPGYT   33 (39)
T ss_pred             CcccCcCCCCcCCCCEeECCCCCeEeE-------------------CCCCCc
Confidence            356776434787778999999999999                   999998

>PF07974 EGF_2: EGF-like domain; InterPro: IPR013111 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.41  E-value=0.0043  Score=37.31  Aligned_cols=27  Identities=48%  Similarity=1.206  Sum_probs=22.8

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELC  141 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C  141 (329)
                      ..|.++|+|..    . .++|+|.+||+|..|
T Consensus         6 ~~C~~~G~C~~----~-~g~C~C~~g~~G~~C   32 (32)
T PF07974_consen    6 NICSGHGTCVS----P-CGRCVCDSGYTGPDC   32 (32)
T ss_pred             CccCCCCEEeC----C-CCEEECCCCCcCCCC
Confidence            46999999995    2 589999999999876

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length. This entry contains EGF domains found in a variety of extracellular and membrane proteins

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=96.41  E-value=0.00082  Score=40.48  Aligned_cols=28  Identities=36%  Similarity=0.778  Sum_probs=24.1

Q ss_pred             CCCCCCCCcccCCCCCC-CCceeecCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRK-GNGQCVCNKEYTGE  139 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~-gs~~C~C~~G~~g~  139 (329)
                      +++|.++|+|+.   .. ++|.|.|++||+|.
T Consensus         3 ~~~C~n~g~C~~---~~~~~y~C~C~~G~~G~   31 (32)
T PF00008_consen    3 SNPCQNGGTCID---LPGGGYTCECPPGYTGK   31 (32)
T ss_dssp             TTSSTTTEEEEE---ESTSEEEEEEBTTEEST
T ss_pred             CCcCCCCeEEEe---CCCCCEEeECCCCCccC
Confidence            357999999997   55 88999999999985

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF12947 EGF_3: EGF domain; InterPro: IPR024731 This entry represents an EGF domain found in the the C terminus of malarial parasite merozoite surface protein 1 [], as well as other proteins

Probab=96.32  E-value=0.0011  Score=41.09  Aligned_cols=29  Identities=28%  Similarity=0.700  Sum_probs=22.3

Q ss_pred             CCCCCCCCCcccCCCCCCCCceeecCCCCCCC
Q psy826          108 FPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGE  139 (329)
Q Consensus       108 ~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~  139 (329)
                      ....|..++.|++   +.+++.|.|++||.|+
T Consensus         4 ~~~~C~~nA~C~~---~~~~~~C~C~~Gy~Gd   32 (36)
T PF12947_consen    4 NNGGCHPNATCTN---TGGSYTCTCKPGYEGD   32 (36)
T ss_dssp             GGGGS-TTCEEEE----TTSEEEEE-CEEECC
T ss_pred             CCCCCCCCcEeec---CCCCEEeECCCCCccC
Confidence            3456889999998   7889999999999975

; PDB: 2NPR_A 1N1I_C 1B9W_A 1YO8_A 2RHP_A.

>smart00179 EGF_CA Calcium-binding EGF-like domain

Probab=96.31  E-value=0.0052  Score=38.12  Aligned_cols=29  Identities=38%  Similarity=0.877  Sum_probs=25.1

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCC-CCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYT-GELC  141 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~-g~~C  141 (329)
                      .+|.+++.|.+   +.++|.|.|.+||. |..|
T Consensus         9 ~~C~~~~~C~~---~~g~~~C~C~~g~~~g~~C   38 (39)
T smart00179        9 NPCQNGGTCVN---TVGSYRCECPPGYTDGRNC   38 (39)
T ss_pred             CCcCCCCEeEC---CCCCeEeECCCCCccCCcC
Confidence            56888889998   78899999999999 8776

>KOG1226|consensus

Probab=96.29  E-value=0.017  Score=58.65  Aligned_cols=87  Identities=34%  Similarity=0.885  Sum_probs=49.7

Q ss_pred             CcCCCCCCCCCCccCCC----------------CCCCCCCCCcccCCCCCCCCceeecCCCCC----CCCCC----cCCC
Q psy826           91 RCCPVDHYGADCKPCLG----------------FPNVCFGNGKCKGNGTRKGNGQCVCNKEYT----GELCN----ECNT  146 (329)
Q Consensus        91 ~~C~~G~~G~~C~~C~~----------------~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~----g~~C~----~C~~  146 (329)
                      +.|.+||+|..|+ |+.                ...+|+++|.|.=       ++|+|.+...    |.+|+    .|+.
T Consensus       480 C~C~~G~~G~~CE-C~~~~~ss~~~~~~Cr~~~~~~vCSgrG~C~C-------GqC~C~~~~~~~i~G~fCECDnfsC~r  551 (783)
T KOG1226|consen  480 CRCDEGWLGKKCE-CSTDELSSSEEEDKCRENSDSPVCSGRGDCVC-------GQCVCHKPDNGKIYGKFCECDNFSCER  551 (783)
T ss_pred             eecCCCCCCCccc-CCccccCcHhHHhhccCCCCCCCcCCCCcEeC-------CceEecCCCCCceeeeeeeccCccccc
Confidence            4599999999885 322                1125666677663       6788988766    77772    2221


Q ss_pred             CccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceecCCCCcccCCCCCC
Q psy826          147 GYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSD  202 (329)
Q Consensus       147 g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~  202 (329)
                              .....|.- |+.|.  |     .+| .|.+||.|...+-=.+.+.|..
T Consensus       552 --------~~g~lC~g-~G~C~--C-----G~C-vC~~GwtG~~C~C~~std~C~~  590 (783)
T KOG1226|consen  552 --------HKGVLCGG-HGRCE--C-----GRC-VCNPGWTGSACNCPLSTDTCES  590 (783)
T ss_pred             --------ccCcccCC-CCeEe--C-----CcE-EcCCCCccCCCCCCCCCccccC
Confidence                    01122222 22222  2     478 9999999987421133444544

>KOG4052|consensus

Probab=96.26  E-value=0.00015  Score=59.37  Aligned_cols=58  Identities=40%  Similarity=0.839  Sum_probs=45.6

Q ss_pred             cccccceEEEecccCcccC----------------------------------------------------cccCccchh
Q psy826           26 IYAKSEVRLIEIQEKMCSE----------------------------------------------------VSGFLDQCH   53 (329)
Q Consensus        26 ~y~~se~~~~e~~e~~C~~----------------------------------------------------~~~~~~~c~   53 (329)
                      .|.+||.||.|+.|++|..                                                    +..-.-+|.
T Consensus        76 ~Y~rselrl~E~tEniCer~ley~~hker~gs~rfaraqsqt~~tlk~l~~KGvKvdlgip~elwd~psvevt~lk~qce  155 (190)
T KOG4052|consen   76 LYQRSELRLAEITENICERFLEYKIHKERTGSERFARAQSQTIETLKGLVEKGVKVDLGIPFELWDQPSVEVTALKQQCE  155 (190)
T ss_pred             eeehhHhHHHHHHHHHHHHHHHHhhhccCcchhHHHHHhhhHHHHHHHHHHcCceeeeCCchHhhcCCcHHHHHHHHHHH
Confidence            7999999999999999980                                                    001245799


Q ss_pred             hHHhhhHHHHHHhhhhccCCcccCCCccceeecc
Q psy826           54 NFAADIESEIEEWWFKVQHSKAKDSDLYTWLCIN   87 (329)
Q Consensus        54 ~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~C~~   87 (329)
                      ++++++|+.|+.|+++.+.    ..++..++|..
T Consensus       156 ~lleeyed~i~ewyf~hq~----e~~l~k~lce~  185 (190)
T KOG4052|consen  156 SLLEEYEDLIEEWYFNHQS----EEDLFKQLCER  185 (190)
T ss_pred             HHHHHHHHHHHHHHhcccc----HHHHHHHHHHh
Confidence            9999999999999999885    23456666653

>smart00051 DSL delta serrate ligand

Probab=95.94  E-value=0.0091  Score=41.92  Aligned_cols=44  Identities=30%  Similarity=0.678  Sum_probs=32.5

Q ss_pred             CcCCCCCCCCCCc-cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCC
Q psy826           91 RCCPVDHYGADCK-PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELC  141 (329)
Q Consensus        91 ~~C~~G~~G~~C~-~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C  141 (329)
                      +.|+++|||..|. .|... +.+.++..|..      .+.|+|.+||+|..|
T Consensus        19 v~C~~~~yG~~C~~~C~~~-~d~~~~~~Cd~------~G~~~C~~Gw~G~~C   63 (63)
T smart00051       19 VTCDENYYGEGCNKFCRPR-DDFFGHYTCDE------NGNKGCLEGWMGPYC   63 (63)
T ss_pred             eeCCCCCcCCccCCEeCcC-ccccCCccCCc------CCCEecCCCCcCCCC
Confidence            4499999999997 55431 23566777852      378999999999876

>KOG1025|consensus

Probab=95.92  E-value=0.0064  Score=62.39  Aligned_cols=83  Identities=29%  Similarity=0.716  Sum_probs=56.2

Q ss_pred             Cccccc-CCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCccccccc
Q psy826          163 CHASCE-SGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEA  241 (329)
Q Consensus       163 C~~~C~-~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~  241 (329)
                      |+..|. ..|+++++.+|.+|+.--.+   +.|++  .|...    .+..  +-..+..|..||+.|.+|+|+++.+|..
T Consensus       489 C~~lCs~~GCWGpgp~qClsCrn~~rg---g~CVe--~C~~l----~g~~--rf~~~~~C~~ChPEC~TCnG~G~d~C~~  557 (1177)
T KOG1025|consen  489 CDKLCSSGGCWGPGPDQCLSCRNFSRG---GTCVE--KCNLL----GGEP--RFVNSRECERCHPECETCNGPGADNCLQ  557 (1177)
T ss_pred             hhhhcCCCCCcCCCCccceeccccccC---ceehh--hcccc----CCcc--cccccceecccChhhccCCCCCccchhh
Confidence            555553 36889999999888764333   34532  23221    1111  1244678999999999999999999999


Q ss_pred             CcccccccCCcccccCc
Q psy826          242 CAEGYKLQQNICINTQA  258 (329)
Q Consensus       242 C~~Gy~~~~~~C~~~~~  258 (329)
                      |+.  ..++-.|+..++
T Consensus       558 CaH--f~dgp~CV~~CP  572 (1177)
T KOG1025|consen  558 CAH--FRDGPHCVSDCP  572 (1177)
T ss_pred             hhh--cCCCcchhccCC
Confidence            986  556667876655

>cd00055 EGF_Lam Laminin-type epidermal growth factor-like domain; laminins are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation; the laminin-type epidermal growth factor-like module occurs in tandem arrays; the domain contains 4 disulfide bonds (loops a-d) the first three resemble epidermal growth factor (EGF); the number of copies of this domain in the different forms of laminins is highly variable ranging from 3 up to 22 copies

Probab=95.84  E-value=0.012  Score=39.27  Aligned_cols=27  Identities=41%  Similarity=1.051  Sum_probs=24.0

Q ss_pred             CCCceeecCCCCCCCCCCcCCCCcccc
Q psy826          125 KGNGQCVCNKEYTGELCNECNTGYFQS  151 (329)
Q Consensus       125 ~gs~~C~C~~G~~g~~C~~C~~g~y~~  151 (329)
                      ..+++|.|++++.|..|+.|++|||+.
T Consensus        16 ~~~G~C~C~~~~~G~~C~~C~~g~~~~   42 (50)
T cd00055          16 PGTGQCECKPNTTGRRCDRCAPGYYGL   42 (50)
T ss_pred             CCCCEEeCCCcCCCCCCCCCCCCCccC
Confidence            356899999999999999999999963

>KOG0196|consensus

Probab=95.78  E-value=0.012  Score=60.20  Aligned_cols=60  Identities=30%  Similarity=0.797  Sum_probs=46.5

Q ss_pred             CCceeecCCCCC----CCCCCcCCCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceecC
Q psy826          126 GNGQCVCNKEYT----GELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       126 gs~~C~C~~G~~----g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~  190 (329)
                      ..+.|.|++||.    |..|..|+.|+|-  .......|.+|...  ..-...+...| .|..||+..+
T Consensus       257 piG~C~C~aGye~~~~~~~C~aCp~G~yK--~~~~~~~C~~CP~~--S~s~~ega~~C-~C~~gyyRA~  320 (996)
T KOG0196|consen  257 PIGGCVCKAGYEEAENGKACQACPPGTYK--ASQGDSLCLPCPPN--SHSSSEGATSC-TCENGYYRAD  320 (996)
T ss_pred             EcCceeecCCCCcccCCCcceeCCCCccc--CCCCCCCCCCCCCC--CCCCCCCCCcc-cccCCcccCC
Confidence            457899999997    6799999999994  23345678998875  22236778999 9999999766

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=95.76  E-value=0.013  Score=35.23  Aligned_cols=30  Identities=40%  Similarity=0.956  Sum_probs=24.9

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCC-CC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGE-LC  141 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~-~C  141 (329)
                      ..+|.+++.|.+   ..+.+.|.|+.||.|. .|
T Consensus         5 ~~~C~~~~~C~~---~~~~~~C~C~~g~~g~~~C   35 (36)
T cd00053           5 SNPCSNGGTCVN---TPGSYRCVCPPGYTGDRSC   35 (36)
T ss_pred             CCCCCCCCEEec---CCCCeEeECCCCCcccCCc
Confidence            356888899998   6788999999999987 54

>KOG1025|consensus

Probab=95.70  E-value=0.024  Score=58.44  Aligned_cols=105  Identities=27%  Similarity=0.632  Sum_probs=65.0

Q ss_pred             CCCceee-cCCCCCCCCC-CcCCCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceecCCCCcccCCCCCC
Q psy826          125 KGNGQCV-CNKEYTGELC-NECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSD  202 (329)
Q Consensus       125 ~gs~~C~-C~~G~~g~~C-~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~  202 (329)
                      +|..+|. |..--+|..| +.|..--. ...-.....|..||+.|. +|+++|...|..|..-  .++ ..|      +.
T Consensus       501 pgp~qClsCrn~~rgg~CVe~C~~l~g-~~rf~~~~~C~~ChPEC~-TCnG~G~d~C~~CaHf--~dg-p~C------V~  569 (1177)
T KOG1025|consen  501 PGPDQCLSCRNFSRGGTCVEKCNLLGG-EPRFVNSRECERCHPECE-TCNGPGADNCLQCAHF--RDG-PHC------VS  569 (1177)
T ss_pred             CCCccceeccccccCceehhhccccCC-cccccccceecccChhhc-cCCCCCccchhhhhhc--CCC-cch------hc
Confidence            4555664 5554446666 55543100 001135567999999998 9999999999888762  121 223      33


Q ss_pred             CCCCCCCce-----eecC--CCCcccCCCcCCC-CCCcCCcccccccC
Q psy826          203 ENICSGNQF-----CVNT--EGSYRCMQCDPSC-NGCHGDGPDMCEAC  242 (329)
Q Consensus       203 ~~~C~~~~~-----C~n~--~gs~~C~~C~~~C-~~C~g~~~~~C~~C  242 (329)
                        .|+++-.     -++.  .-...|.+||+.| -+|.|+++..|..|
T Consensus       570 --~CP~G~~G~~s~ii~kypd~~~~C~~Ch~nCth~c~~~~~~~c~~~  615 (1177)
T KOG1025|consen  570 --DCPDGVTGPKSTIIWKYPDPQIECRPCHPNCTHGCLGPTSPGCVLN  615 (1177)
T ss_pred             --cCCCcccCCCCceeeecCCCccccccCCCcccccccCCCCCCcccC
Confidence              4433211     1111  1234599999999 58999999999987

>PF12662 cEGF: Complement Clr-like EGF-like

Probab=95.66  E-value=0.0052  Score=34.29  Aligned_cols=17  Identities=29%  Similarity=0.788  Sum_probs=14.5

Q ss_pred             Cccccccc--CCcccccCc
Q psy826          242 CAEGYKLQ--QNICINTQA  258 (329)
Q Consensus       242 C~~Gy~~~--~~~C~~~~~  258 (329)
                      |++||.+.  +..|+|++|
T Consensus         6 C~~Gy~l~~d~~~C~DIdE   24 (24)
T PF12662_consen    6 CPPGYQLSPDGRSCEDIDE   24 (24)
T ss_pred             CCCCCcCCCCCCccccCCC
Confidence            99999964  678999986

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=95.57  E-value=0.017  Score=35.24  Aligned_cols=29  Identities=38%  Similarity=0.887  Sum_probs=24.6

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELC  141 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C  141 (329)
                      .+|.+++.|.+   ..+.+.|.|.+||.|..|
T Consensus         9 ~~C~~~~~C~~---~~~~~~C~C~~g~~g~~C   37 (38)
T cd00054           9 NPCQNGGTCVN---TVGSYRCSCPPGYTGRNC   37 (38)
T ss_pred             CCcCCCCEeEC---CCCCeEeECCCCCcCCcC
Confidence            45877889997   788899999999999766

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF00053 Laminin_EGF: Laminin EGF-like (Domains III and V); InterPro: IPR002049 Laminins [] are the major noncollagenous components of basement membranes that mediate cell adhesion, growth migration, and differentiation

Probab=95.55  E-value=0.0061  Score=40.42  Aligned_cols=26  Identities=46%  Similarity=1.128  Sum_probs=21.8

Q ss_pred             CCCceeecCCCCCCCCCCcCCCCccc
Q psy826          125 KGNGQCVCNKEYTGELCNECNTGYFQ  150 (329)
Q Consensus       125 ~gs~~C~C~~G~~g~~C~~C~~g~y~  150 (329)
                      ..+++|.|+++|.|..|+.|.++||+
T Consensus        15 ~~~G~C~C~~~~~G~~C~~C~~g~~~   40 (49)
T PF00053_consen   15 PSTGQCVCKPGTTGPRCDQCKPGYFG   40 (49)
T ss_dssp             ETCEEESBSTTEESTTS-EE-TTEEC
T ss_pred             CCCCEEeccccccCCcCcCCCCcccc
Confidence            35689999999999999999999996

They are composed of distinct but related alpha, beta and gamma chains. The three chains form a cross-shaped molecule that consist of a long arm and three short globular arms. The long arm consist of a coiled coil structure contributed by all three chains and cross-linked by interchain disulphide bonds. Beside different types of globular domains each subunit contains, in its first half, consecutive repeats of about 60 amino acids in length that include eight conserved cysteines []. The tertiary structure [, ] of this domain is remotely similar in its N-terminal to that of the EGF-like module (see PDOC00021 from PROSITEDOC). It is known as a 'LE' or 'laminin-type EGF-like' domain. The number of copies of the LE domain in the different forms of laminins is highly variable; from 3 up to 22 copies have been found. A schematic representation of the topology of the four disulphide bonds in the LE domain is shown below. +-------------------+ +-|-----------+ | +--------+ +-----------------+ | | | | | | | | xxCxCxxxxxxxxxxxCxxxxxxxCxxCxxxxxGxxCxxCxxgaagxxxxxxxxxxxCxx sssssssssssssssssssssssssssssssssss 'C': conserved cysteine involved in a disulphide bond 'a': conserved aromatic residue 'G': conserved glycine (lower case = less conserved) 's': region similar to the EGF-like domain In mouse laminin gamma-1 chain, the seventh LE domain has been shown to be the only one that binds with a high affinity to nidogen []. The binding-sites are located on the surface within the loops C1-C3 and C5-C6 [, ]. Long consecutive arrays of LE domains in laminins form rod-like elements of limited flexibility [], which determine the spacing in the formation of laminin networks of basement membranes [].; PDB: 3TBD_A 3ZYG_B 3ZYI_B 2Y38_A 1KLO_A 1NPE_B 3ZYJ_B 1TLE_A.

>smart00180 EGF_Lam Laminin-type epidermal growth factor-like domai

Probab=95.44  E-value=0.013  Score=38.32  Aligned_cols=25  Identities=40%  Similarity=1.095  Sum_probs=23.1

Q ss_pred             CCceeecCCCCCCCCCCcCCCCccc
Q psy826          126 GNGQCVCNKEYTGELCNECNTGYFQ  150 (329)
Q Consensus       126 gs~~C~C~~G~~g~~C~~C~~g~y~  150 (329)
                      .+++|.|++++.|..|+.|++|||+
T Consensus        16 ~~G~C~C~~~~~G~~C~~C~~g~~g   40 (46)
T smart00180       16 DTGQCECKPNVTGRRCDRCAPGYYG   40 (46)
T ss_pred             CCCEEECCCCCCCCCCCcCCCCcCC
Confidence            3689999999999999999999996

>smart00181 EGF Epidermal growth factor-like domain

Probab=95.39  E-value=0.019  Score=34.72  Aligned_cols=28  Identities=32%  Similarity=0.807  Sum_probs=23.3

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCC-CCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTG-ELC  141 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g-~~C  141 (329)
                      .+|.++ .|.+   ..+++.|.|.+||.| ..|
T Consensus         6 ~~C~~~-~C~~---~~~~~~C~C~~g~~g~~~C   34 (35)
T smart00181        6 GPCSNG-TCIN---TPGSYTCSCPPGYTGDKRC   34 (35)
T ss_pred             CCCCCC-EEEC---CCCCeEeECCCCCccCCcc
Confidence            468777 8987   678999999999999 655

>smart00261 FU Furin-like repeats

Probab=95.06  E-value=0.032  Score=36.30  Aligned_cols=35  Identities=40%  Similarity=1.003  Sum_probs=28.5

Q ss_pred             CCcCCcccccCCcccCCCCCCccCCCCceecCCCCcc
Q psy826          159 LCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCY  195 (329)
Q Consensus       159 ~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~  195 (329)
                      .|.+|+..|. +|.+++...|+.|..||++.. +.|+
T Consensus         3 ~C~~C~~~C~-~C~~~~~~~C~~C~~~~~l~~-~~Cv   37 (46)
T smart00261        3 ECKPCHPECA-TCTGPGPDDCTSCKHGFFLDG-GTCV   37 (46)
T ss_pred             cccccccccc-ccCCcCcCcCccCCcccCCCC-CCcc
Confidence            5788999998 899877889999999998765 4443

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=95.03  E-value=0.01  Score=36.70  Aligned_cols=28  Identities=29%  Similarity=0.685  Sum_probs=21.2

Q ss_pred             cccccCCcc-cCCCCCCccCCCCceecCCC
Q psy826          164 HASCESGCS-TGGPKGCTKCKSGWAADKDI  192 (329)
Q Consensus       164 ~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~  192 (329)
                      +++|.+.|. .++++.| .|++||.+..++
T Consensus         5 NGgC~h~C~~~~g~~~C-~C~~Gy~L~~D~   33 (36)
T PF14670_consen    5 NGGCSHICVNTPGSYRC-SCPPGYKLAEDG   33 (36)
T ss_dssp             GGGSSSEEEEETTSEEE-E-STTEEE-TTS
T ss_pred             CCCcCCCCccCCCceEe-ECCCCCEECcCC
Confidence            456777787 7889999 999999998754

...

>KOG3512|consensus

Probab=95.01  E-value=0.062  Score=51.67  Aligned_cols=76  Identities=22%  Similarity=0.632  Sum_probs=46.8

Q ss_pred             CCCC-CcccCCCCCCCCceeecCCCCCCCCCCcCCCCcccccc----CcCCCCCcCCc----------------------
Q psy826          112 CFGN-GKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYK----DEKTILCSKCH----------------------  164 (329)
Q Consensus       112 C~~~-~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~----~~~~~~C~~C~----------------------  164 (329)
                      |..+ +.|+-+  ..+..+|.|.-+.+|..|..|.+-||....    ......|.+|.                      
T Consensus       280 CNgHAs~Cv~d--~~~~ltCdC~HNTaGPdCgrCKpfy~dRPW~raT~~~a~~c~ac~Cn~harrcrfn~Ely~lSgr~S  357 (592)
T KOG3512|consen  280 CNGHASRCVMD--ESSHLTCDCEHNTAGPDCGRCKPFYYDRPWGRATALPANECVACNCNGHARRCRFNMELYRLSGRRS  357 (592)
T ss_pred             ecCccceeeec--cCCceEEecccCCCCCCcccccccccCCCccccccCCCccccccccchhhhhcccchhhhcccCccc
Confidence            5544 347641  234489999999999999999998875221    11223344321                      


Q ss_pred             -ccccCCcc-cCCCCCCccCCCCceecC
Q psy826          165 -ASCESGCS-TGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       165 -~~C~~~C~-~~~~~~C~~C~~G~~~~~  190 (329)
                       ..|. .|. +..+..|..|.+||+-+.
T Consensus       358 ggvCl-nCrHnTaGrhChyCreGyyRd~  384 (592)
T KOG3512|consen  358 GGVCL-NCRHNTAGRHCHYCREGYYRDG  384 (592)
T ss_pred             cceEe-ecccCCCCcccccccCccccCC
Confidence             1122 343 334567888999998776

>PF12661 hEGF: Human growth factor-like EGF; PDB: 2YGQ_A 2E26_A 3A7Q_A 2YGP_A 2YGO_A 1HRE_A 1HAE_A 1HAF_A 1HRF_A

Probab=94.54  E-value=0.015  Score=27.54  Aligned_cols=13  Identities=38%  Similarity=1.035  Sum_probs=8.7

Q ss_pred             eeecCCCCCCCCC
Q psy826          129 QCVCNKEYTGELC  141 (329)
Q Consensus       129 ~C~C~~G~~g~~C  141 (329)
                      .|+|++||+|..|
T Consensus         1 ~C~C~~G~~G~~C   13 (13)
T PF12661_consen    1 TCQCPPGWTGPNC   13 (13)
T ss_dssp             EEEE-TTEETTTT
T ss_pred             CccCcCCCcCCCC
Confidence            4778888887765

>PF14670 FXa_inhibition: Coagulation Factor Xa inhibitory site; PDB: 3Q3K_B 1NFY_B 1LQD_A 1G2L_B 1IQF_L 2UWP_B 2VH6_B 3KQC_L 2P93_L 2BQW_A

Probab=94.26  E-value=0.018  Score=35.58  Aligned_cols=24  Identities=63%  Similarity=1.316  Sum_probs=19.5

Q ss_pred             CCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          205 ICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       205 ~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      .|  .++|++++++|+|.                   |++||.+.
T Consensus         7 gC--~h~C~~~~g~~~C~-------------------C~~Gy~L~   30 (36)
T PF14670_consen    7 GC--SHICVNTPGSYRCS-------------------CPPGYKLA   30 (36)
T ss_dssp             GS--SSEEEEETTSEEEE--------------------STTEEE-
T ss_pred             Cc--CCCCccCCCceEeE-------------------CCCCCEEC
Confidence            45  56999999999999                   99999986

...

>cd00064 FU Furin-like repeats

Probab=94.06  E-value=0.087  Score=34.72  Aligned_cols=32  Identities=41%  Similarity=1.011  Sum_probs=24.9

Q ss_pred             CCcccccCCcccCCCCCCccCCCCceecCCCCcc
Q psy826          162 KCHASCESGCSTGGPKGCTKCKSGWAADKDIGCY  195 (329)
Q Consensus       162 ~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~  195 (329)
                      +|+..|. +|.+++...|+.|..||.+.. +.|+
T Consensus         1 ~C~~~C~-~C~g~~~~~C~~C~~~~~~~~-~~Cv   32 (49)
T cd00064           1 PCHPSCA-TCTGPGPDQCTSCRHGFYLDG-GTCV   32 (49)
T ss_pred             CCCCccC-CCcCcCcCcCccCcCccCCCC-Cccc
Confidence            3677887 898887789999999998654 4454

Cysteine rich region. Exact function of the domain is not known. Furin is a serine-kinase dependent proprotein processor. Other members of this family include endoproteases and cell surface receptors.

>cd00054 EGF_CA Calcium-binding EGF-like domain, present in a large number of membrane-bound and extracellular (mostly animal) proteins

Probab=94.03  E-value=0.056  Score=32.85  Aligned_cols=34  Identities=50%  Similarity=1.040  Sum_probs=26.2

Q ss_pred             CCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          197 INECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       197 ~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      +++|....+|..++.|.+..++|.|.                   |++||.+.
T Consensus         2 ~~~C~~~~~C~~~~~C~~~~~~~~C~-------------------C~~g~~g~   35 (38)
T cd00054           2 IDECASGNPCQNGGTCVNTVGSYRCS-------------------CPPGYTGR   35 (38)
T ss_pred             cccCCCCCCcCCCCEeECCCCCeEeE-------------------CCCCCcCC
Confidence            45665423687778999999999999                   99999873

Many of these proteins require calcium for their biological function and calcium-binding sites have been found to be located at the N-terminus of particular EGF-like domains; calcium-binding may be crucial for numerous protein-protein interactions. Six conserved core cysteines form three disulfide bridges as in non calcium-binding EGF domains, whose structures are very similar. EGF_CA can be found in tandem repeat arrangements.

>PF00008 EGF: EGF-like domain This is a sub-family of the Pfam entry This is a sub-family of the Pfam entry; InterPro: IPR006209 A sequence of about thirty to forty amino-acid residues long found in the sequence of epidermal growth factor (EGF) has been shown [, , , , ] to be present, in a more or less conserved form, in a large number of other, mostly animal proteins

Probab=93.94  E-value=0.024  Score=34.01  Aligned_cols=27  Identities=33%  Similarity=0.894  Sum_probs=24.0

Q ss_pred             CCCCCCceeecCC-CCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          204 NICSGNQFCVNTE-GSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       204 ~~C~~~~~C~n~~-gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      .+|.+++.|+... ++|.|.                   |++||.|.
T Consensus         4 ~~C~n~g~C~~~~~~~y~C~-------------------C~~G~~G~   31 (32)
T PF00008_consen    4 NPCQNGGTCIDLPGGGYTCE-------------------CPPGYTGK   31 (32)
T ss_dssp             TSSTTTEEEEEESTSEEEEE-------------------EBTTEEST
T ss_pred             CcCCCCeEEEeCCCCCEEeE-------------------CCCCCccC
Confidence            4788899999998 899999                   99999875

The list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied. The functional significance of EGF domains in what appear to be unrelated proteins is not yet clear. However, a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase). The EGF domain includes six cysteine residues which have been shown (in EGF) to be involved in disulphide bonds. The main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet. Subdomains between the conserved cysteines vary in length.; GO: 0005515 protein binding; PDB: 1WHE_A 1CCF_A 1APO_A 1WHF_A 2VJ3_A 1TOZ_A 4D90_B 3CFW_A 1EDM_B 1IXA_A ....

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=93.68  E-value=0.0094  Score=50.51  Aligned_cols=122  Identities=26%  Similarity=0.665  Sum_probs=72.3

Q ss_pred             eeecccccCcCCCCCC---CCCCc---cCCC---CCCCCCCCCcccCCC--CCCCCceeecCCCCC--CCCC--CcCCCC
Q psy826           83 WLCINKLKRCCPVDHY---GADCK---PCLG---FPNVCFGNGKCKGNG--TRKGNGQCVCNKEYT--GELC--NECNTG  147 (329)
Q Consensus        83 ~~C~~~~~~~C~~G~~---G~~C~---~C~~---~~~~C~~~~~C~~~~--~~~gs~~C~C~~G~~--g~~C--~~C~~g  147 (329)
                      +.|.      |.+||.   -.+|+   .|..   .-.+|..-+.|.+..  .....+.|.|.+||.  ...|  ..|.. 
T Consensus        20 fEC~------Cnegfvl~~EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~C~~gY~~~~~vCvp~~C~~-   92 (197)
T PF06247_consen   20 FECK------CNEGFVLKNENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCDCINGYILKQGVCVPNKCNN-   92 (197)
T ss_dssp             EEEE------ESTTEEEEETTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEEE-TTEEESSSSEEEGGGSS-
T ss_pred             eEEE------cCCCcEEccccccccceecCcccccCccccchhhhhcCCCcccceeEEEecccCceeeCCeEchhhcCc-
Confidence            5677      999997   56776   4643   236788888998633  235679999999997  3345  33332 


Q ss_pred             ccccccCcCCCCCcCCcccccCCcc----cCCCCCCccCCCCceecCCCCccc--CCCCCCCCCCCCCceeecCCCCccc
Q psy826          148 YFQSYKDEKTILCSKCHASCESGCS----TGGPKGCTKCKSGWAADKDIGCYD--INECSDENICSGNQFCVNTEGSYRC  221 (329)
Q Consensus       148 ~y~~~~~~~~~~C~~C~~~C~~~C~----~~~~~~C~~C~~G~~~~~~~~C~d--~~eC~~~~~C~~~~~C~n~~gs~~C  221 (329)
                                   ..|..   +.|.    .+....| +|.-|+...+.++|.-  ..+|..  .|..+..|....+-|+|
T Consensus        93 -------------~~Cg~---GKCI~d~~~~~~~~C-SC~IGkV~~dn~kCtk~G~T~C~L--KCk~nE~CK~~~~~Y~C  153 (197)
T PF06247_consen   93 -------------KDCGS---GKCILDPDNPNNPTC-SCNIGKVPDDNKKCTKTGETKCSL--KCKENEECKLVDGYYKC  153 (197)
T ss_dssp             ----------------TT---EEEEEEEGGGSEEEE-EE-TEEETTTTTESEEEE----------TTTEEEEEETTEEEE
T ss_pred             -------------eecCC---CeEEecCCCCCCcee-EeeeceEeccCCcccCCCccceee--ecCCCcceeeeCcEEEe
Confidence                         11221   2343    2333489 9999999555455752  234766  78889999999999999


Q ss_pred             CCCcCCCCCCcCCcccccccCccccccc
Q psy826          222 MQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       222 ~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      .                   |.+|+.+.
T Consensus       154 ~-------------------~~~~~~~~  162 (197)
T PF06247_consen  154 V-------------------CKEGFPGD  162 (197)
T ss_dssp             E-------------------E-TT-EEE
T ss_pred             e-------------------cCCCCCCC
Confidence            9                   99998876

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>PF00594 Gla: Vitamin K-dependent carboxylation/gamma-carboxyglutamic (GLA) domain; InterPro: IPR000294 The GLA (gamma-carboxyglutamic acid-rich) domain contains glutamate residues that have been post-translationally modified by vitamin K-dependent carboxylation to form gamma-carboxyglutamate (Gla) [, , ]

Probab=93.41  E-value=0.019  Score=36.76  Aligned_cols=39  Identities=26%  Similarity=0.455  Sum_probs=32.4

Q ss_pred             hhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhh
Q psy826           19 WEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFK   69 (329)
Q Consensus        19 ~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~   69 (329)
                      |||.+.|+.++      ||++++|+     +.+..++++....+. .+|..
T Consensus         1 ~ee~~~g~ler------Ec~eE~C~-----~eea~E~f~~~~~t~-~fw~~   39 (42)
T PF00594_consen    1 LEELKPGNLER------ECMEEVCE-----YEEAREIFEDTEGTN-AFWKK   39 (42)
T ss_dssp             TGGGSCHHHHH------HHTSSTHT-----HHHHHHHHHSHHHHH-HHHHH
T ss_pred             CCccccCCchH------HHHHhhcC-----hHHHHHHHHChHhHH-HHHHH
Confidence            79999999999      99999999     888888888876654 55543

All glutamic acid (Glu) residues present in the GLA domain are potential carboxylation sites; in coagulation proteins, all Gu residues are modified to Gla, while in osteocalcin and matrix Gla proteins only some Glu residues are modified to Gla. The GLA domain is responsible for the high-affinity binding of calcium ions. It starts at the N-terminal extremity of the mature form of proteins and ends with a conserved aromatic residue; a conserved Gla-x(3)-Gla-x-Cys motif [] is found in the middle of the domain which seems to be important for substrate recognition by the carboxylase. The 3D structure of the GLA domain has been solved [, ]. Calcium ions induce conformational changes in the GLA domain that and are necessary for the proper folding of the GLA domain. A common structural feature of functional GLA domains is the clustering of N-terminal hydrophobic residues into a hydrophobic patch that mediates interaction with the cell surface membrane []. Proteins known to contain a GLA domain include []: Coagulation factor X [] Coagulation factor VII [] Coagulation factor IX [] Coagulation factor XIV (vitamin K-dependent protein C) [] Vitamin K-dependent protein S [] Vitamin K-dependent protein Z [] Prothrombin Transthyretin Osteocalcin (also known as bone-Gla protein, BGP) Matrix Gla protein (MGP) [] Inter-alpha-trypsin inhibitor heavy chain H2 Growth arrest-specific protein 6 (Gas-6) [] ; GO: 0005509 calcium ion binding, 0005576 extracellular region; PDB: 1Q3M_A 1VZM_C 2PF1_A 1NL2_A 1NL1_A 2SPT_A 2PF2_A 2ZP0_L 1W0Y_L 2AEI_L ....

>KOG1226|consensus

Probab=93.41  E-value=0.16  Score=51.88  Aligned_cols=38  Identities=45%  Similarity=1.110  Sum_probs=29.4

Q ss_pred             CCCCCc----cCCCC-CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826           98 YGADCK----PCLGF-PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus        98 ~G~~C~----~C~~~-~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ||+.|+    .|+.. ...|.++|.|.=       ++|+|.+||+|..|+
T Consensus       538 ~G~fCECDnfsC~r~~g~lC~g~G~C~C-------G~CvC~~GwtG~~C~  580 (783)
T KOG1226|consen  538 YGKFCECDNFSCERHKGVLCGGHGRCEC-------GRCVCNPGWTGSACN  580 (783)
T ss_pred             eeeeeeccCcccccccCcccCCCCeEeC-------CcEEcCCCCccCCCC
Confidence            488885    45542 256888888874       789999999999994

>cd00053 EGF Epidermal growth factor domain, found in epidermal growth factor (EGF) presents in a large number of proteins, mostly animal; the list of proteins currently known to contain one or more copies of an EGF-like pattern is large and varied; the functional significance of EGF-like domains in what appear to be unrelated proteins is not yet clear; a common feature is that these repeats are found in the extracellular domain of membrane-bound proteins or in proteins known to be secreted (exception: prostaglandin G/H synthase); the domain includes six cysteine residues which have been shown to be involved in disulfide bonds; the main structure is a two-stranded beta-sheet followed by a loop to a C-terminal short two-stranded sheet; Subdomains between the conserved cysteines vary in length; the region between the 5th and 6th cysteine contains two conserved glycines of which at least one is present in most EGF-like domains; a subset of these bind calcium

Probab=92.75  E-value=0.13  Score=30.65  Aligned_cols=27  Identities=56%  Similarity=1.109  Sum_probs=23.2

Q ss_pred             CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          204 NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       204 ~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      ..|.++..|++..+.+.|.                   |+.||.+.
T Consensus         6 ~~C~~~~~C~~~~~~~~C~-------------------C~~g~~g~   32 (36)
T cd00053           6 NPCSNGGTCVNTPGSYRCV-------------------CPPGYTGD   32 (36)
T ss_pred             CCCCCCCEEecCCCCeEeE-------------------CCCCCccc
Confidence            4677778999999999999                   99999876

>PF12946 EGF_MSP1_1: MSP1 EGF domain 1; InterPro: IPR024730 This EGF-like domain is found at the C terminus of the malaria parasite MSP1 protein

Probab=92.74  E-value=0.04  Score=34.04  Aligned_cols=32  Identities=34%  Similarity=0.746  Sum_probs=24.5

Q ss_pred             CCCCCCceeecCC-CCcccCCCcCCCCCCcCCcccccccCcccccccCCccc
Q psy826          204 NICSGNQFCVNTE-GSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICI  254 (329)
Q Consensus       204 ~~C~~~~~C~n~~-gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~  254 (329)
                      ..|+.++.|++.. |+..|.                   |..||..++..|+
T Consensus         5 ~~cP~NA~C~~~~dG~eecr-------------------Cllgyk~~~~~C~   37 (37)
T PF12946_consen    5 TKCPANAGCFRYDDGSEECR-------------------CLLGYKKVGGKCV   37 (37)
T ss_dssp             S---TTEEEEEETTSEEEEE-------------------E-TTEEEETTEEE
T ss_pred             ccCCCCcccEEcCCCCEEEE-------------------eeCCccccCCCcC
Confidence            4788999999877 999999                   9999999888774

MSP1 is the merozoite surface protein 1. This domain is part of the C-terminal fragment that is proteolytically processed from the the rest of the protein and is left attached to the surface of the invading parasite [].; PDB: 1N1I_C 2FLG_A 1CEJ_A 2NPR_A 1B9W_A 1OB1_F.

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=92.48  E-value=0.15  Score=38.96  Aligned_cols=27  Identities=26%  Similarity=0.914  Sum_probs=19.4

Q ss_pred             CCCCCcCCcccccccCcccccccCCcccc
Q psy826          227 SCNGCHGDGPDMCEACAEGYKLQQNICIN  255 (329)
Q Consensus       227 ~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~  255 (329)
                      .|..|.+  +..|..|..||.++++.|+.
T Consensus        29 ~C~~C~~--~~~C~~C~~GY~~~~~~Cv~   55 (96)
T PTZ00382         29 NCKSCVV--DGVCGECNSGFSLDNGKCVS   55 (96)
T ss_pred             CCcCCCC--CCccccCcCCcccCCCcccc
Confidence            4556644  34688899999998877764

>smart00181 EGF Epidermal growth factor-like domain

Probab=92.42  E-value=0.15  Score=30.71  Aligned_cols=25  Identities=48%  Similarity=1.051  Sum_probs=21.7

Q ss_pred             CCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          205 ICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       205 ~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      .|..+ .|++..+++.|.                   |++||.+.
T Consensus         7 ~C~~~-~C~~~~~~~~C~-------------------C~~g~~g~   31 (35)
T smart00181        7 PCSNG-TCINTPGSYTCS-------------------CPPGYTGD   31 (35)
T ss_pred             CCCCC-EEECCCCCeEeE-------------------CCCCCccC
Confidence            67667 899999999999                   99999885

>smart00069 GLA Domain containing Gla (gamma-carboxyglutamate) residues

Probab=92.22  E-value=0.094  Score=37.01  Aligned_cols=38  Identities=29%  Similarity=0.387  Sum_probs=32.3

Q ss_pred             hhhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHh
Q psy826           18 AWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEW   66 (329)
Q Consensus        18 ~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~   66 (329)
                      ++||.+.|+.++      |++|++|.     +++..+++++.+.+.+.|
T Consensus        24 ~~Ee~~~~~ler------Ec~eE~C~-----~eea~E~f~~~~~t~~fw   61 (65)
T smart00069       24 LLEELRPGNLER------ECQEEICS-----LEEAREVFEDNEGTDEFY   61 (65)
T ss_pred             chhhhccCccch------HHHhhhcc-----CcHHHHHHHchHhHHHHH
Confidence            489999999998      99999999     888888888887775544

A hyaluronan-binding domain found in proteins associated with the extracellular matrix, cell adhesion and cell migration.

>PF06247 Plasmod_Pvs28: Plasmodium ookinete surface protein Pvs28; InterPro: IPR010423 This family consists of several ookinete surface protein (Pvs28) from several species of Plasmodium

Probab=91.72  E-value=0.033  Score=47.26  Aligned_cols=61  Identities=30%  Similarity=0.788  Sum_probs=44.4

Q ss_pred             CCCCCccCCCCceecCCCCcccCCCCCCC----CCCCCCceeecCC-----CCcccCCCcCCCCCCcCCcccccccCccc
Q psy826          175 GPKGCTKCKSGWAADKDIGCYDINECSDE----NICSGNQFCVNTE-----GSYRCMQCDPSCNGCHGDGPDMCEACAEG  245 (329)
Q Consensus       175 ~~~~C~~C~~G~~~~~~~~C~d~~eC~~~----~~C~~~~~C~n~~-----gs~~C~~C~~~C~~C~g~~~~~C~~C~~G  245 (329)
                      ..+.| .|.+||.+....+|....+|...    .+|.+-+.|++..     ..|+|.                   |.+|
T Consensus        18 NHfEC-~Cnegfvl~~EntCE~kv~C~~~e~~~K~Cgdya~C~~~~~~~~~~~~~C~-------------------C~~g   77 (197)
T PF06247_consen   18 NHFEC-KCNEGFVLKNENTCEEKVECDKLENVNKPCGDYAKCINQANKGEERAYKCD-------------------CING   77 (197)
T ss_dssp             SEEEE-EESTTEEEEETTEEEE----SG-GGTTSEEETTEEEEE-SSTTSSTSEEEE-------------------E-TT
T ss_pred             CceEE-EcCCCcEEccccccccceecCcccccCccccchhhhhcCCCcccceeEEEe-------------------cccC
Confidence            34789 99999999887889988888762    6788888998765     468888                   9999


Q ss_pred             ccccCCcccc
Q psy826          246 YKLQQNICIN  255 (329)
Q Consensus       246 y~~~~~~C~~  255 (329)
                      |.+..+.|++
T Consensus        78 Y~~~~~vCvp   87 (197)
T PF06247_consen   78 YILKQGVCVP   87 (197)
T ss_dssp             EEESSSSEEE
T ss_pred             ceeeCCeEch
Confidence            9988777763

Pvs25 and Pvs28 are expressed on the surface of ookinetes. These proteins are potential candidates for vaccine and induce antibodies that block the infectivity of Plasmodium vivax in immunised animals [].; GO: 0009986 cell surface, 0016020 membrane; PDB: 1Z3G_B 1Z1Y_B 1Z27_A.

>KOG3512|consensus

Probab=90.01  E-value=0.84  Score=44.18  Aligned_cols=65  Identities=23%  Similarity=0.634  Sum_probs=39.5

Q ss_pred             CCceee-cCCCCCCCCCCcCCCCccccccC--cCCCCCcCCc--cc--ccCCcccCCCCCCccCCCCceecCCC
Q psy826          126 GNGQCV-CNKEYTGELCNECNTGYFQSYKD--EKTILCSKCH--AS--CESGCSTGGPKGCTKCKSGWAADKDI  192 (329)
Q Consensus       126 gs~~C~-C~~G~~g~~C~~C~~g~y~~~~~--~~~~~C~~C~--~~--C~~~C~~~~~~~C~~C~~G~~~~~~~  192 (329)
                      ..++|. |.-...|..|..|.+|||.+...  .....|..|+  +.  =..+|+ ..+.+| .|++|-.|...+
T Consensus       357 SggvClnCrHnTaGrhChyCreGyyRd~s~pl~hrkaCk~CdChpVGs~gktCN-q~tGqC-pCkeGvtG~tCn  428 (592)
T KOG3512|consen  357 SGGVCLNCRHNTAGRHCHYCREGYYRDGSKPLTHRKACKACDCHPVGSAGKTCN-QTTGQC-PCKEGVTGLTCN  428 (592)
T ss_pred             ccceEeecccCCCCcccccccCccccCCCCCCchhhhhhhcCCccccccccccc-ccCCcc-cCCCCCcccccc
Confidence            345775 88888899999999999953322  1234566542  21  002455 123567 777777665543

>PTZ00382 Variant-specific surface protein (VSP); Provisional

Probab=88.67  E-value=0.74  Score=35.18  Aligned_cols=45  Identities=24%  Similarity=0.750  Sum_probs=28.4

Q ss_pred             CCCcCCCCccccccCcCCCCCcCCc-ccccCCcccCCCCCCccCCCCceecC
Q psy826          140 LCNECNTGYFQSYKDEKTILCSKCH-ASCESGCSTGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       140 ~C~~C~~g~y~~~~~~~~~~C~~C~-~~C~~~C~~~~~~~C~~C~~G~~~~~  190 (329)
                      .|+.|.+|||   .+.....|.+|. .+|. +|..  +..|..|..||.+..
T Consensus         5 ~Ct~C~~g~~---~~~~~~~C~~C~~~~C~-~C~~--~~~C~~C~~GY~~~~   50 (96)
T PTZ00382          5 VCTSCDSDKK---PNKDGSGCVLCSVGNCK-SCVV--DGVCGECNSGFSLDN   50 (96)
T ss_pred             ccCcCCCCCc---cCCCCCcCCcCCCCCCc-CCCC--CCccccCcCCcccCC
Confidence            4667777776   222334577776 4676 6753  246878888888754

>PF01414 DSL: Delta serrate ligand; InterPro: IPR001774 Ligands of the Delta/Serrate/lag-2 (DSL) family and their receptors, members of the lin-12/Notch family, mediate cell-cell interactions that specify cell fate in invertebrates and vertebrates

Probab=86.61  E-value=0.15  Score=35.77  Aligned_cols=44  Identities=34%  Similarity=0.766  Sum_probs=20.0

Q ss_pred             CcCCCCCCCCCCc-cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCC
Q psy826           91 RCCPVDHYGADCK-PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELC  141 (329)
Q Consensus        91 ~~C~~G~~G~~C~-~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C  141 (329)
                      +.|.+.|||+.|. .|.+... -..+-+|..      .+.-+|.+||+|..|
T Consensus        19 v~C~~nyyG~~C~~~C~~~~d-~~ghy~Cd~------~G~~~C~~Gw~G~~C   63 (63)
T PF01414_consen   19 VVCDENYYGPNCSKFCKPRDD-SFGHYTCDS------NGNKVCLPGWTGPNC   63 (63)
T ss_dssp             ----TTEETTTT-EE---EEE-TTEEEEE-S------S--EEE-TTEESTTS
T ss_pred             EECCCCCCCccccCCcCCCcC-CcCCcccCC------CCCCCCCCCCcCCCC
Confidence            3499999999998 5543111 122334542      244568899988766

In Caenorhabditis elegans, two DSL genes, lag-2 and apx-1, influence different cell fate decisions during development []. Molecular interaction between Notch and Serrate, another EGF-homologous transmembrane protein containing a region of striking similarity to Delta, has been shown and the same two EGF repeats of Notch may also constitute a Serrate binding domain [, ].; GO: 0007154 cell communication, 0016020 membrane; PDB: 2VJ2_A.

>cd01475 vWA_Matrilin VWA_Matrilin: In cartilaginous plate, extracellular matrix molecules mediate cell-matrix and matrix-matrix interactions thereby providing tissue integrity

Probab=85.83  E-value=0.5  Score=41.71  Aligned_cols=37  Identities=41%  Similarity=0.910  Sum_probs=30.4

Q ss_pred             CCcccCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          192 IGCYDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       192 ~~C~d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      ..|.++++|... +.|.  +.|.++.|+|.|.                   |.+||.+.
T Consensus       182 ~~C~~~~~C~~~~~~c~--~~C~~~~g~~~c~-------------------c~~g~~~~  219 (224)
T cd01475         182 KICVVPDLCATLSHVCQ--QVCISTPGSYLCA-------------------CTEGYALL  219 (224)
T ss_pred             ccCcCchhhcCCCCCcc--ceEEcCCCCEEeE-------------------CCCCccCC
Confidence            348888889765 5674  5899999999999                   99999875

Some members of the matrilin family are expressed specifically in developing cartilage rudiments. The matrilin family consists of at least four members. All the members of the matrilin family contain VWA domains, EGF-like domains and a heptad repeat coiled-coiled domain at the carboxy terminus which is responsible for the oligomerization of the matrilins. The VWA domains have been shown to be essential for matrilin network formation by interacting with matrix ligands.

>PF09064 Tme5_EGF_like: Thrombomodulin like fifth domain, EGF-like; InterPro: IPR015149 This domain adopts a fold similar to other EGF domains, with a flat major and a twisted minor beta sheet

Probab=84.27  E-value=1.1  Score=27.12  Aligned_cols=22  Identities=27%  Similarity=0.768  Sum_probs=15.6

Q ss_pred             CcccCCCCCCccCCCCceecCCC
Q psy826          170 GCSTGGPKGCTKCKSGWAADKDI  192 (329)
Q Consensus       170 ~C~~~~~~~C~~C~~G~~~~~~~  192 (329)
                      .|.-.....| .|++||.++.+.
T Consensus        11 ~CDpn~~~~C-~CPeGyIlde~~   32 (34)
T PF09064_consen   11 DCDPNSPGQC-FCPEGYILDEGS   32 (34)
T ss_pred             ccCCCCCCce-eCCCceEecCCc
Confidence            3442344699 999999998743

Disulphide pairing, however, is not of the usual 1-3, 2-4, 5-6 type; rather 1-2, 3-4, 5-6 pairing is found. Its extended major sheet (strands beta-2 and beta-3 and the connecting loop) projects into thrombin's active site groove. This domain is required for interaction of thrombomodulin with thrombin, and subsequent activation of protein-C []. ; GO: 0004888 transmembrane signaling receptor activity, 0016021 integral to membrane

>cd00185 TNFR Tumor necrosis factor receptor (TNFR) domain; superfamily of TNF-like receptor domains

Probab=83.90  E-value=3.3  Score=31.57  Aligned_cols=20  Identities=25%  Similarity=0.599  Sum_probs=13.5

Q ss_pred             CcccCCCCCCccCCCCceecC
Q psy826          170 GCSTGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       170 ~C~~~~~~~C~~C~~G~~~~~  190 (329)
                      .|+......| .|.+||+...
T Consensus        68 ~ct~t~dt~C-~C~~G~y~~~   87 (98)
T cd00185          68 PCTATRNTVC-GCKPGFYCLT   87 (98)
T ss_pred             cCCCCCCCeE-eCCCCCEecC
Confidence            3443445788 7888888765

When bound to TNF-like cytokines, TNFRs trigger multiple signal transduction pathways, they are involved in inflammation response, apoptosis, autoimmunity and organogenesis. TNFRs domains are elongated with generally three tandem repeats of cysteine-rich domains (CRDs). They fit in the grooves between protomers within the ligand trimer. Some TNFRs, such as NGFR and HveA, bind ligands with no structural similarity to TNF and do not bind ligand trimers.

>cd00185 TNFR Tumor necrosis factor receptor (TNFR) domain; superfamily of TNF-like receptor domains

Probab=83.74  E-value=4.2  Score=30.98  Aligned_cols=18  Identities=17%  Similarity=0.534  Sum_probs=11.7

Q ss_pred             CCcccccccCcccccccCC
Q psy826          233 GDGPDMCEACAEGYKLQQN  251 (329)
Q Consensus       233 g~~~~~C~~C~~Gy~~~~~  251 (329)
                      ......|. |++||+....
T Consensus        71 ~t~dt~C~-C~~G~y~~~~   88 (98)
T cd00185          71 ATRNTVCG-CKPGFYCLTK   88 (98)
T ss_pred             CCCCCeEe-CCCCCEecCC
Confidence            34445555 9999987653

When bound to TNF-like cytokines, TNFRs trigger multiple signal transduction pathways, they are involved in inflammation response, apoptosis, autoimmunity and organogenesis. TNFRs domains are elongated with generally three tandem repeats of cysteine-rich domains (CRDs). They fit in the grooves between protomers within the ligand trimer. Some TNFRs, such as NGFR and HveA, bind ligands with no structural similarity to TNF and do not bind ligand trimers.

>PHA03099 epidermal growth factor-like protein (EGF-like protein); Provisional

Probab=83.22  E-value=0.14  Score=40.61  Aligned_cols=32  Identities=22%  Similarity=0.592  Sum_probs=21.5

Q ss_pred             CCCCCCceeecCC--CCcccCCCcCCCCCCcCCcccccccCcccccccCCcccccC
Q psy826          204 NICSGNQFCVNTE--GSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQ  257 (329)
Q Consensus       204 ~~C~~~~~C~n~~--gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~~~  257 (329)
                      +.|-+| .|...+  ..+.|.                   |..||.|.  +|+..+
T Consensus        51 ~YClHG-~C~yI~dl~~~~Cr-------------------C~~GYtGe--RCEh~d   84 (139)
T PHA03099         51 GYCLHG-DCIHARDIDGMYCR-------------------CSHGYTGI--RCQHVV   84 (139)
T ss_pred             CEeECC-EEEeeccCCCceeE-------------------CCCCcccc--ccccee
Confidence            345544 565444  577888                   99999987  776544

>PF01683 EB: EB module; InterPro: IPR006149 The EB domain has no known function

Probab=81.98  E-value=2.1  Score=28.34  Aligned_cols=21  Identities=33%  Similarity=0.998  Sum_probs=15.8

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYT  137 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~  137 (329)
                      ..|..++.|.+       ++|.|++||.
T Consensus        26 ~qC~~~s~C~~-------g~C~C~~g~~   46 (52)
T PF01683_consen   26 EQCIGGSVCVN-------GRCQCPPGYV   46 (52)
T ss_pred             CCCCCcCEEcC-------CEeECCCCCE
Confidence            44666777865       7899999885

It is found in several Caenorhabditis sp. and Drosophila sp. proteins. The domain contains 8 conserved cysteines that probably form four disulphide bridges and is found associated with kunitz domains IPR002223 from INTERPRO

>PHA02887 EGF-like protein; Provisional

Probab=80.07  E-value=1.4  Score=34.46  Aligned_cols=37  Identities=38%  Similarity=0.881  Sum_probs=27.0

Q ss_pred             cCCC-CCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          104 PCLG-FPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       104 ~C~~-~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      +|+. ..+-|. +|.|.... ......|.|.+||+|..|+
T Consensus        85 pC~~eyk~YCi-HG~C~yI~-dL~epsCrC~~GYtG~RCE  122 (126)
T PHA02887         85 KCKNDFNDFCI-NGECMNII-DLDEKFCICNKGYTGIRCD  122 (126)
T ss_pred             ccChHhhCEee-CCEEEccc-cCCCceeECCCCcccCCCC
Confidence            5654 335677 67998533 2566899999999999885

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

No homologous structure with e-value below 0.005

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	329
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	3e-10
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	2e-07
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	3e-07
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	5e-05
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	7e-07
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	1e-06
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	8e-07
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	1e-06
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	7e-06
1yy9_A	624	Epidermal growth factor receptor; cell surface rec	9e-06
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	9e-06
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	4e-05
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	3e-05
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	4e-05
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	8e-05
2hr7_A	486	Insulin receptor; hormone receptor, leucine rich r	5e-05
1igr_A	478	Insulin-like growth factor receptor 1; hormone rec	7e-05
2bou_A	143	EGF-like module containing mucin-like hormone rece	8e-05
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	1e-04
2ahx_A	617	P180ERBB4, receptor tyrosine-protein kinase ERBB-4	1e-04
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	1e-04
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	1e-04
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	5e-04
1mox_A	501	Epidermal growth factor receptor; EGFR, receptor,	3e-04
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	4e-04
3v65_B	386	Low-density lipoprotein receptor-related protein;	7e-04

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A Length = 118

 Score = 56.2 bits (136), Expect = 3e-10
 Identities = 21/84 (25%), Positives = 30/84 (35%), Gaps = 4/84 (4%)

Query: 143 ECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSD 202
            C  G+     +           +C + C       C  C  G+  D    C DI+EC +
Sbjct: 27  VCAEGFAPIPHEPHRCQMFCNQTACPADCDPNTQASCE-CPEGYILDDGFICTDIDECEN 85

Query: 203 ENICSGNQFCVNTEGSYRCMQCDP 226
              CS    C N  G++ C  C P
Sbjct: 86  GGFCS--GVCHNLPGTFEC-ICGP 106

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens} Length = 147

 Score = 48.9 bits (117), Expect = 2e-07
 Identities = 28/112 (25%), Positives = 39/112 (34%), Gaps = 15/112 (13%)

Query: 129 QCVCNKEYTGELC-------NECN-TGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCT 180
            C C+ E T +          +          + E  I  +   + C S         CT
Sbjct: 25  ICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATLKSQCCSSLGAAWGSPCT 84

Query: 181 ------KCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDP 226
                  C  G++  K   C DI+EC        N  CVNT GS++C QC  
Sbjct: 85  LCQVDPICGKGYSRIKGTQCEDIDECEVFPGVCKNGLCVNTRGSFKC-QCPS 135

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 19/48 (39%), Positives = 26/48 (54%), Gaps = 3/48 (6%)

Query: 181 KCKSGWAADKDIG--CYDINECSDENICSGNQFCVNTEGSYRCMQCDP 226
           KC  G+ +   +   C DI+EC  + +      C NTEGSYRC +C P
Sbjct: 28  KCDEGYESGFMMMKNCMDIDECQRDPLLCRGGVCHNTEGSYRC-ECPP 74

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 Length = 86

 Score = 40.4 bits (95), Expect = 5e-05
 Identities = 21/68 (30%), Positives = 27/68 (39%), Gaps = 10/68 (14%)

Query: 196 DINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDM--CEA---CAEGYKLQQ 250
           DI+EC       G   CVNT G + C +CD    G       M  C     C     L +
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFEC-KCDE---GYESGFMMMKNCMDIDECQRDPLLCR 57

Query: 251 N-ICINTQ 257
             +C NT+
Sbjct: 58  GGVCHNTE 65

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 45.7 bits (109), Expect = 7e-07
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 6/59 (10%)

Query: 182 CKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE 240
           C  G+    +  C D +ECS  N C GN  C N  G + C  C+    G        CE
Sbjct: 30  CPFGYILAGN-ECVDTDECSVGNPC-GNGTCKNVIGGFEC-TCEE---GFEPGPMMTCE 82

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A Length = 82

 Score = 44.9 bits (107), Expect = 1e-06
 Identities = 20/66 (30%), Positives = 31/66 (46%), Gaps = 9/66 (13%)

Query: 194 CYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCE---ACAEGYKLQQ 250
             D++EC + ++C  +  C+NT+GSYRC +C     G    G + C     C+ G     
Sbjct: 2   AVDMDECKEPDVCK-HGQCINTDGSYRC-ECPF---GYILAG-NECVDTDECSVGNPCGN 55

Query: 251 NICINT 256
             C N 
Sbjct: 56  GTCKNV 61

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A* Length = 634

 Score = 49.6 bits (118), Expect = 8e-07
 Identities = 20/81 (24%), Positives = 30/81 (37%), Gaps = 8/81 (9%)

Query: 179 CTKCKSGWAADKDIGCYDINECSDEN----ICSGNQFCVNTEGSYRCMQCDPSCNGCHGD 234
           C  C  G+  +    C D++EC+         S    CVNT+  + C+ C P      G+
Sbjct: 27  CGFCPVGFLGN-GTHCEDLDECALVPDICFSTSKVPRCVNTQPGFHCLPCPP---RYRGN 82

Query: 235 GPDMCEACAEGYKLQQNICIN 255
            P      A   + Q     N
Sbjct: 83  QPVGVGLEAAKTEKQVCEPEN 103

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A Length = 107

 Score = 45.8 bits (109), Expect = 1e-06
 Identities = 20/45 (44%), Positives = 25/45 (55%), Gaps = 3/45 (6%)

Query: 182 CKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDP 226
           C  G+       C DI+EC D + CS  Q CVN EG Y+C QC+ 
Sbjct: 54  CPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKC-QCEE 95

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A Length = 162

 Score = 44.7 bits (106), Expect = 7e-06
 Identities = 18/88 (20%), Positives = 29/88 (32%), Gaps = 6/88 (6%)

Query: 143 ECNTGYFQSYKDEKTILCSKCHASCESGC---STGGPKGCTKCKSGWAADKD-IGCYDIN 198
               G   S       L       CE      ++     C     G+  +   +   DI+
Sbjct: 65  SNEIGVGVSKASCCCSLGKAWGTPCEMCPAVNTSEYKILCP-GGEGFRPNPITVILEDID 123

Query: 199 ECSDENICSGNQFCVNTEGSYRCMQCDP 226
           EC +         C+NT GS++C +C  
Sbjct: 124 ECQELPGLCQGGKCINTFGSFQC-RCPT 150

>1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine kinase, glycoprotein, antigen:antibody complex, FAB fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A* Length = 624

 Score = 46.2 bits (108), Expect = 9e-06
 Identities = 30/192 (15%), Positives = 51/192 (26%), Gaps = 13/192 (6%)

Query: 68  FKVQHSKAKDSDLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGN 127
               +     ++   W  +                  C     VC      +G    +  
Sbjct: 438 IISGNKNLCYANTINWKKLFGTSGQKTKIISNRGENKCKATGQVCHALCSPEGCWGPEPR 497

Query: 128 GQCVCNKEYTGELC-NECNTGYFQSYKDEKTILCSKCHASCE-----SGCSTGGPKGCTK 181
               C     G  C ++C     +  +  +   C +CH  C        C+  GP  C +
Sbjct: 498 DCVSCRNVSRGRECVDKCKLLEGEPREFVENSECIQCHPECLPQAMNITCTGRGPDNCIQ 557

Query: 182 CKSGWAADKDIGCYDINECSDENICSGNQF-CVNTEGSYRCMQCDPSC-NGCHGDGPDMC 239
           C           C  +  C    +   N       +  + C  C P+C  GC G G   C
Sbjct: 558 CAHYIDGPH---C--VKTCPAGVMGENNTLVWKYADAGHVCHLCHPNCTYGCTGPGLRGC 612

Query: 240 EACAEGYKLQQN 251
                 +    +
Sbjct: 613 PTNGPKHHHHHH 624

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score = 46.4 bits (109), Expect = 9e-06
 Identities = 27/181 (14%), Positives = 42/181 (23%), Gaps = 34/181 (18%)

Query: 87  NKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNT 146
           +  + C  +                   NG+         + Q VC        C     
Sbjct: 150 DDNEECGDICP---GTAKGKTNCPATVINGQFVERCWTHSHCQKVCPTICKSHGCTAE-- 204

Query: 147 GYFQSYKDEKTILCSKCHASCESGCST-GGPKGCTKCKSGWAADKDIGCYDINECSDENI 205
                           CH+ C   CS    P  C  C++          Y    C +   
Sbjct: 205 -------------GLCCHSECLGNCSQPDDPTKCVACRNF---------YLDGRCVET-- 240

Query: 206 CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNE 265
           C    +       +RC+     C   H    +        Y +  N CI         N 
Sbjct: 241 CPPPYYHFQD---WRCVNFSF-CQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNS 296

Query: 266 N 266
           +
Sbjct: 297 S 297

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E Length = 897

 Score = 44.1 bits (103), Expect = 4e-05
 Identities = 34/219 (15%), Positives = 50/219 (22%), Gaps = 35/219 (15%)

Query: 79  DLYTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTG 138
               W  I        +     D + C    ++C G  K K N            + +T 
Sbjct: 129 ATIDWSRILDSVEDNHIVLNKDDNEEC---GDICPGTAKGKTNCPATVINGQFVERCWTH 185

Query: 139 ELC-NECNTGYFQSYKDEKTILCSKCHASCESGCST-GGPKGCTKCK------------- 183
             C   C T         +      CH+ C   CS    P  C  C+             
Sbjct: 186 SHCQKVCPTICKSHGCTAE---GLCCHSECLGNCSQPDDPTKCVACRNFYLDGRCVETCP 242

Query: 184 ------SGWAADKDIGCYDINECSDENICSGNQFCVNTEGS--------YRCMQCDPSCN 229
                   W       C D++     +   G    V             Y     +  C 
Sbjct: 243 PPYYHFQDWRCVNFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCT 302

Query: 230 GCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNENLY 268
            C G  P +C        +               N +L 
Sbjct: 303 PCLGPCPKVCHLLEGEKTIDSVTSAQELRGCTVINGSLI 341

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L Length = 400

 Score = 44.4 bits (104), Expect = 3e-05
 Identities = 26/119 (21%), Positives = 38/119 (31%), Gaps = 4/119 (3%)

Query: 160 CSKCHASCESGCS-TGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGS 218
           C   +  C   C+       C  C  G+       C DI+EC D + CS  Q CVN EG 
Sbjct: 3   CLDNNGGCSHVCNDLKIGYECL-CPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGG 59

Query: 219 YRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVYVGLC 277
           Y+C   +      H        + A  +   ++               +      V L 
Sbjct: 60  YKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYTSLIPNLRNVVALD 118

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 40.7 bits (96), Expect = 4e-05
 Identities = 21/53 (39%), Positives = 27/53 (50%), Gaps = 9/53 (16%)

Query: 182 CKSGWAADKD-IGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHG 233
           C  G+  +     C DI+ECS EN+C+  Q CVN  G Y C      C+G  G
Sbjct: 29  CPEGYRYNLKSKSCEDIDECS-ENMCA--QLCVNYPGGYTC-----YCDGKKG 73

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens} Length = 87

 Score = 39.6 bits (93), Expect = 8e-05
 Identities = 10/31 (32%), Positives = 15/31 (48%), Gaps = 1/31 (3%)

Query: 196 DINECSDENICSGNQFCVNTEGSYRCMQCDP 226
           D++ECS +    G   C N  G + C +C  
Sbjct: 2   DVDECSLKPSICGTAVCKNIPGDFEC-ECPE 31

>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens} Length = 486

 Score = 43.7 bits (102), Expect = 5e-05
 Identities = 25/177 (14%), Positives = 35/177 (19%), Gaps = 21/177 (11%)

Query: 81  YTWLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGEL 140
             W  I        +     D + C                    G     C        
Sbjct: 131 IDWSRILDSVEDNHIVLNKDDNEECGDICPGTAKGKTNCPATVINGQFVERCWTHSH--C 188

Query: 141 CNECNTGYFQSYKDEKTILCSKCHASCESGCSTG-GPKGCTKCKSGWAADKDIGCYDINE 199
              C T         +      CH+ C   CS    P  C  C++          Y    
Sbjct: 189 QKVCPTICKSHGCTAE---GLCCHSECLGNCSQPDDPTKCVACRNF---------YLDGR 236

Query: 200 CSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINT 256
           C +   C    +            C    + C              Y +  N CI  
Sbjct: 237 CVET--CPPPYYHFQDWRCVNFSFCQDLHHKCKNS----RRQGCHQYVIHNNKCIPE 287

>1igr_A Insulin-like growth factor receptor 1; hormone receptor, insulin receptor family; HET: NAG FUC BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 Length = 478

 Score = 43.3 bits (101), Expect = 7e-05
 Identities = 24/181 (13%), Positives = 43/181 (23%), Gaps = 23/181 (12%)

Query: 87  NKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNT 146
           + +      ++   +  P            +         N +       T      C +
Sbjct: 128 SLILDAVSNNYIVGNKPPKECGDLCPGTMEEKPMCEKTTINNEYNYRCWTTNRCQKMCPS 187

Query: 147 GYFQSYKDEKTILCSKCHASCESGCSTG-GPKGCTKCKSGWAADKDIGCYDINECSDENI 205
              +    E       CH  C   CS       C  C+           Y    C     
Sbjct: 188 TCGKRACTEN---NECCHPECLGSCSAPDNDTACVACRHY---------YYAGVCVPA-- 233

Query: 206 CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNE 265
           C  N +       +RC+  D   N           + +EG+ +    C+         N 
Sbjct: 234 CPPNTYRFE---GWRCVDRDFCANILSA-----ESSDSEGFVIHDGECMQECPSGFIRNG 285

Query: 266 N 266
           +
Sbjct: 286 S 286

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A Length = 143

 Score = 41.3 bits (97), Expect = 8e-05
 Identities = 15/50 (30%), Positives = 22/50 (44%), Gaps = 4/50 (8%)

Query: 194 CYDINECS-DENICSGNQFCVNTEGSYRCMQCDP--SCNGCHGDGPDMCE 240
           C D++ECS  ++ C  +  C NT GSY C +C P         +      
Sbjct: 93  CQDVDECSSGQHQCDSSTVCFNTVGSYSC-RCRPGWKPRHGIPNNQKDTV 141

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 3ije_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B* Length = 690

 Score = 42.8 bits (100), Expect = 1e-04
 Identities = 29/163 (17%), Positives = 50/163 (30%), Gaps = 35/163 (21%)

Query: 91  RCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQ 150
           + C  D +            +C G+G+C         G C+C+ ++TG  CN        
Sbjct: 519 KYCECDDFSCVRYK----GEMCSGHGQCS-------CGDCLCDSDWTGYYCNCTTR--TD 565

Query: 151 SYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQ 210
           +      +LCS     CE G        C   + G       G       +  + C+  +
Sbjct: 566 TCMSSNGLLCS-GRGKCECGS-------CVCIQPGS-----YGDTCEKCPTCPDACTFKK 612

Query: 211 FCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNIC 253
            CV         +C     G   D       C +  +  + + 
Sbjct: 613 ECV---------ECKKFDRGALHDENTCNRYCRDEIESVKELK 646

>2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY crystallography, neuregulins, heparin-binding, cell CY signaling protein; HET: NAG NDG; 2.40A {Homo sapiens} PDB: 3u2p_A* Length = 617

 Score = 42.7 bits (99), Expect = 1e-04
 Identities = 35/172 (20%), Positives = 51/172 (29%), Gaps = 13/172 (7%)

Query: 83  WLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN 142
           W  +        V       + C     VC       G      +    C +   G +C 
Sbjct: 450 WTTLFSTINQRIVIRDNRKAENCTAEGMVCNHLCSSDGCWGPGPDQCLSCRRFSRGRICI 509

Query: 143 E-CNTGYFQSYKDEKTILCSKCHASCE------SGCSTGGPKGCTKCKSGWAADKDIGCY 195
           E CN    +  + E   +C +C   CE        C   GP  CTKC          G  
Sbjct: 510 ESCNLYDGEFREFENDSICVECDPQCEKMEDGLLTCHGPGPDNCTKCSHFK-----DGPN 564

Query: 196 DINECSDENICSGNQFCVNTEGSYRCMQCDPSC-NGCHGDGPDMCEACAEGY 246
            + +C D    + +      +    C  C P+C  GC+G     C       
Sbjct: 565 CVEKCPDGLQGANSFIFKYADPDRECHPCHPNCTQGCNGPTSHDCIYYPWTG 616

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens} Length = 791

 Score = 42.9 bits (100), Expect = 1e-04
 Identities = 35/180 (19%), Positives = 58/180 (32%), Gaps = 7/180 (3%)

Query: 85  CINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNEC 144
           CI+  ++C        DCK                 N  +  +G+C+   +    +  +C
Sbjct: 245 CIHGSRQC----DREYDCKDMSDEVGCVNVTLCEGPNKFKCHSGECIT-LDKVCNMARDC 299

Query: 145 NTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDEN 204
                +  K+  T  C   +  C   C+         C  G+       C DI+EC D +
Sbjct: 300 RDWSDEPIKECGTNECLDNNGGCSHVCNDLKIGYECLCPDGFQLVAQRRCEDIDECQDPD 359

Query: 205 ICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTN 264
            CS  Q CVN EG Y+C   +      H        + A  +   ++             
Sbjct: 360 TCS--QLCVNLEGGYKCQCEEGFQLDPHTKACKAVGSIAYLFFTNRHEVRKMTLDRSEYT 417

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 42.4 bits (99), Expect = 1e-04
 Identities = 20/101 (19%), Positives = 29/101 (28%), Gaps = 10/101 (9%)

Query: 92  CCPVDHYGADCKPCLG-FPNVCFGNGKCKGNGT-RKGNGQCVCNKEYTGELCNECNTGYF 149
            C    Y    +   G     C   G   G        G C C +  TG+ C++C   ++
Sbjct: 422 VCKEGFYDLSAEDPYGCKSCACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHW 481

Query: 150 QSYKDEKTILCSKCHASCESGCSTGGP----KGCTKCKSGW 186
               D     C  C   C+ G +         G   C    
Sbjct: 482 GLSNDLDG--CRPC--DCDLGGALNNSCSEDSGQCSCLPHM 518

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus} Length = 525

 Score = 40.8 bits (95), Expect = 5e-04
 Identities = 27/173 (15%), Positives = 39/173 (22%), Gaps = 30/173 (17%)

Query: 104 PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILC--- 160
            C G  + C              +G C+C     G  C  C   Y               
Sbjct: 255 FCYGHASECAPVDGVNEEVEGMVHGHCMCRHNTKGLNCELCMDFYHDLPWRPAEGRNSNA 314

Query: 161 ----------SKCHASCESGCSTGGPKG--CTKCKSGWAADKDIGCYDI----------- 197
                     S CH       +TG   G  C  C+          C              
Sbjct: 315 CKKCNCNEHSSSCHFDMAVFLATGNVSGGVCDNCQHNTMGRNCEQCKPFYFQHPERDIRD 374

Query: 198 ----NECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGY 246
                 C+ +   S N    +    +        C        + C+ C EG+
Sbjct: 375 PNLCEPCTCDPAGSENGGICDGYTDFSVGLIAGQCRCKLHVEGERCDVCKEGF 427

>1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 Length = 501

 Score = 41.5 bits (96), Expect = 3e-04
 Identities = 21/177 (11%), Positives = 41/177 (23%), Gaps = 18/177 (10%)

Query: 83  WLCINKLKRCCPVDHYGADCKP-CLGFPNVCFGNGKCKGNGTRKGNGQCV-CNKEYTGEL 140
           W    +  +          C   C G       + +C    T      C+ C K      
Sbjct: 176 WGAGEENCQKLTKIICAQQCSGRCRGKSPSDCCHNQCAAGCTGPRESDCLVCRKFRDEAT 235

Query: 141 C-NECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINE 199
           C + C      +    +  +  +   S  + C         KC   +       C     
Sbjct: 236 CKDTCPPLMLYNPTTYQMDVNPEGKYSFGATC-------VKKCPRNYVVTDHGSCVRA-- 286

Query: 200 CSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINT 256
                 C  + + +  +G  +C +C+  C              +             
Sbjct: 287 ------CGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGEFKDSLSINATNIKHFKN 337

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B* Length = 687

 Score = 41.2 bits (96), Expect = 4e-04
 Identities = 27/153 (17%), Positives = 36/153 (23%), Gaps = 27/153 (17%)

Query: 93  CPVDHYGADC-KPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQS 151
           C     G+ C         +     +C G G  +    C C+  Y   LC EC       
Sbjct: 542 CHPGFEGSACQCERTTEGCLNPRRVECSGRGRCR-CNVCECHSGYQLPLCQECPG----- 595

Query: 152 YKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADK-DIGCYDI---NECSDENICS 207
                      C + C    S      C K + G         C  +   N       C 
Sbjct: 596 -----------CPSPCGKYISCA---ECLKFEKGPFGKNCSAACPGLQLSNNPVKGRTCK 641

Query: 208 GNQFCVNTEGSYRCMQCD-PSCNGCHGDGPDMC 239
                      Y   Q D       + D    C
Sbjct: 642 ERDSEGCWVA-YTLEQQDGMDRYLIYVDESREC 673

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus} Length = 386

 Score = 40.1 bits (93), Expect = 7e-04
 Identities = 28/112 (25%), Positives = 46/112 (41%), Gaps = 12/112 (10%)

Query: 163 CHASCESGCSTGGPKGCTKCKSGWAADKD-IGCYDINECSDENICSGNQFCVNTEGSYRC 221
           C   C+     G  + CT C +G+   +D   C D+NEC++E  CS  Q C N+EG+++C
Sbjct: 13  CAQKCQ--MIRGAVQ-CT-CHTGYRLTEDGRTCQDVNECAEEGYCS--QGCTNSEGAFQC 66

Query: 222 MQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKSQNTNENLYRYGVY 273
                 C   +   PD     A G +           +    + + Y   + 
Sbjct: 67  -----WCEAGYELRPDRRSCKALGPEPVLLFANRIDIRQVLPHRSEYTLLLN 113

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	329
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	99.41
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	99.39
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.33
2bou_A	143	EGF-like module containing mucin-like hormone rece	99.31
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	99.29
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	99.23
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	99.22
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	99.2
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	99.19
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	99.13
2vh0_B	134	Activated factor XA light chain; serine protease,	99.11
1z1y_A	186	Ookinete surface protein PVS25; four EGF-like doma	99.09
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	99.07
2vj3_A	135	Neurogenic locus notch homolog protein 1; transcri	98.97
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	98.95
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.92
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.87
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	98.86
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.83
1yo8_A	634	Thrombospondin-2; EGF, Ca(2+)-binding domains, lec	98.82
2bou_A	143	EGF-like module containing mucin-like hormone rece	98.82
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	98.79
4d90_A	143	EGF-like repeat and discoidin I-like domain-conta	98.73
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.67
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	98.61
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.61
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	98.6
2vj2_A	169	Jagged-1; signalling, polymorphism, glycoprotein,	98.54
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.51
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.51
1aut_L	114	Activated protein C; serine proteinase, plasma cal	98.4
2gy5_A	423	Angiopoietin-1 receptor; ligand-binding domain, tr	98.38
3v65_B	386	Low-density lipoprotein receptor-related protein;	98.35
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	98.27
2ahx_A	617	P180ERBB4, receptor tyrosine-protein kinase ERBB-4	98.24
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	98.23
1z6c_A	87	Vitamin K-dependent protein S; EGF module, blood c	98.23
1emn_A	82	Fibrillin; extracellular matrix, calcium-binding,	98.22
2ygq_A	324	WIF-1, WNT inhibitory factor 1; signaling protein,	98.18
2w2n_E	107	LDL receptor, low-density lipoprotein receptor; hy	98.15
1klo_A	162	Laminin; glycoprotein; 2.10A {Mus musculus} SCOP:	98.14
1x7a_L	146	Coagulation factor IX, light chain; inhibition, bl	98.13
1tpg_A	91	T-plasminogen activator F1-G; plasminogen activati	98.08
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	98.04
1lmj_A	86	Fibrillin 1; EGF, calcium, microfibril, neonatal,	98.02
1aut_L	114	Activated protein C; serine proteinase, plasma cal	97.98
3fcs_B	690	Integrin beta-3; beta propeller, rossmann fold, EG	97.89
3h5c_B	317	Vitamin K-dependent protein Z; protein Z-protein Z	97.88
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	97.82
1nfu_B	195	Coagulation factor XA, light chain; hydrolase; HET	97.81
3k6s_B	687	Integrin beta-2; cell receptor, adhesion molecule,	97.78
2vh0_B	134	Activated factor XA light chain; serine protease,	97.77
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	97.72
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.69
2w86_A	147	Fibrillin-1, fibrillin1; phosphoprotein, EGF-like	97.67
1dx5_I	118	Thrombomodulin; serine proteinase, EGF-like domain	97.65
4aqs_A	525	Laminin subunit beta-1; cell adhesion; HET: NAG BM	97.65
2c4f_L	142	Coagulation factor VII precursor; blood coagulatio	97.6
3p5b_L	400	Low density lipoprotein receptor variant; B-propel	97.53
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	97.46
1uzk_A	162	Fibrillin-1; glycoprotein, extra-cellular matrix,	97.44
1m6b_A	621	C-ER, receptor protein-tyrosine kinase ERBB-3; cel	97.44
1nl0_G	51	Factor IX; immune system, antibody, GLA domain; HE	97.36
3m0c_C	791	LDL receptor, low-density lipoprotein receptor; pr	97.3
1n7d_A	699	LDL receptor, low-density lipoprotein receptor; fa	97.3
3v65_B	386	Low-density lipoprotein receptor-related protein;	97.27
4fbr_A	267	Lectin, myxobacterial hemagglutinin; beta-barrel,	97.27
3i2t_A	551	Epidermal growth factor receptor, isoform A; EGFR,	97.27
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	97.25
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	97.22
1j34_C	46	Coagulation factor IX; magnesium ION, calcium ION,	97.2
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	97.13
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	97.13
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	97.09
1yy9_A	624	Epidermal growth factor receptor; cell surface rec	97.07
2ahx_A	617	P180ERBB4, receptor tyrosine-protein kinase ERBB-4	97.02
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	96.95
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	96.94
1lqv_C	33	Vitamin-K dependent protein C; GLA (gamma-carboxyg	96.92
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	96.91
1edm_B	39	Factor IX; epidermal growth factor, EGF, calcium-	96.91
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	96.85
2p28_B	217	Integrin beta-2; hybrid domain, PSI domain, I-EGF	96.82
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	96.77
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	96.77
1yy9_A	624	Epidermal growth factor receptor; cell surface rec	96.7
1mox_A	501	Epidermal growth factor receptor; EGFR, receptor,	96.69
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	96.67
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	96.63
3i2t_A	551	Epidermal growth factor receptor, isoform A; EGFR,	96.63
1mox_A	501	Epidermal growth factor receptor; EGFR, receptor,	96.62
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.59
1n8y_C	608	Protooncoprotein; tyrosin kinase receptor, cell su	96.59
1m6b_A	621	C-ER, receptor protein-tyrosine kinase ERBB-3; cel	96.57
1kig_L	51	Factor XA; glycoprotein, serine protease, plasma,	96.46
2jkh_L	55	Factor X light chain; plasma, calcium, zymogen, se	96.44
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	96.41
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	96.41
4aqt_A	375	Laminin subunit gamma-1; cell adhesion; HET: NAG B	96.38
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	96.37
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	96.25
1kli_L	69	Factor VIIA; extrinsic coagulation pathway, serine	96.19
2wg3_C	463	Hedgehog-interacting protein; lipoprotein, develop	96.18
2kl7_A	71	Fibulin-4; secreted, calcium, disease mutation, di	96.16
1nl1_A	147	Prothrombin; hydrolase; HET: CGU NAG; 1.90A {Bos t	96.01
2k2s_B	61	Micronemal protein 6; microneme protein complex, c	95.96
2y38_A	403	Laminin subunit alpha-5; structural protein, cell	95.92
3u7u_G	55	Neuregulin 1; signaling protein, transferase-trans	95.86
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	95.78
2bz6_L	53	Blood coagulation factor VIIA; serine protease, en	95.78
2hr7_A	486	Insulin receptor; hormone receptor, leucine rich r	95.76
1egf_A	53	Epidermal growth factor; NMR {Mus musculus} SCOP:	95.67
1n8y_C	608	Protooncoprotein; tyrosin kinase receptor, cell su	95.67
3fl7_A	536	Ephrin receptor; ATP-binding, kinase, nucleotide-b	95.31
3v64_C	349	Agrin; beta propeller, laminin-G, signaling, prote	94.64
3zyj_B	426	Netrin-G1; cell adhesion, synapse; HET: NAG BMA MA	94.54
2wph_E	59	Coagulation factor IXA light chain; serine proteas	94.11
2wph_E	59	Coagulation factor IXA light chain; serine proteas	94.07
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	94.01
3ltf_D	58	Protein spitz; receptor-ligand complex ectodomain	93.84
1ob1_C	99	Major merozoite surface protein; immune system, im	93.65
1a3p_A	45	Epidermal growth factor; disulfide connectivities,	93.5
1szb_A	170	Mannose binding lectin-associated serine protease-	93.4
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	93.16
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	92.99
2dtg_E	897	Insulin receptor; IR ectodomain, X-RAY crystallogr	92.72
1hae_A	63	Heregulin-alpha; growth factor; NMR {Homo sapiens}	92.18
1k36_A	46	Epiregulin; EGF-like fold, hormone/growth factor c	92.1
3urf_Z	171	Tumor necrosis factor receptor superfamily member;	91.82
1apq_A	53	Complement protease C1R; EGF, calcium binding, ser	90.35
3e50_C	50	Protransforming growth factor alpha; IDE, TGF-alph	90.1
1iox_A	50	Betacellulin; EGF-like fold, hormone/growth factor	89.74
1gl4_A	285	Nidogen-1, entactin; immunoglobulin-like domain, e	89.73
3ca7_A	52	Protein spitz; argos, EGF, developmental protein,	89.68
3cfw_A	164	L-selectin; EGF, cell adhesion, EGF-like domain, g	89.58
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	89.52
1g1s_A	162	P-selectin; selectin, lectin, EGF, sulphated, SLEX	89.18
2ygo_A	188	WIF-1, WNT inhibitory factor 1; signaling protein,	88.12
3k51_B	176	Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity,	87.67
1nzi_A	159	Complement C1S component; calcium, innate immunity	87.55
3p0y_A	214	Epidermal growth factor receptor; beta-sandwich, a	87.15
2fd6_A	122	Urokinase-type plasminogen activator; UPAR, ATF, A	87.04
2e26_A	725	Reelin, reeler protein; signaling protein; HET: NA	86.64
1nql_B	53	Epidermal growth factor; cell surface receptor, ty	85.09
2rnl_A	50	Amphiregulin; AR, colorectum cell-derived growth f	85.02
1ext_A	162	Tumor necrosis factor receptor; binding protein, c	84.54
1jma_B	167	Herpesvirus entry mediator; V-type IG molecule and	84.52
3qd6_R	177	CD40L receptor, tumor necrosis factor receptor sup	84.0
1xdt_R	79	Hbegf, heparin-binding epidermal growth factor; co	83.9
2hr7_A	486	Insulin receptor; hormone receptor, leucine rich r	83.7
1sg1_X	161	Tumor necrosis factor receptor superfamily member	83.15
3nt1_A	587	Prostaglandin-endoperoxide synthase 2; prostagland	82.96
3me4_A	216	Tumor necrosis factor receptor superfamily member;	82.85
3u3p_A	313	Tumor necrosis factor receptor superfamily member;	82.09
3f1s_B	283	Vitamin K-dependent protein Z; PZ, ZPI, complex, s	81.79
1n1i_A	105	Merozoite surface protein-1; MSP1, malaria, surfac	80.96
2hey_R	146	Tumor necrosis factor receptor superfamily member;	80.95
3k51_B	176	Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity,	80.04

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=99.41  E-value=2.1e-13  Score=110.54  Aligned_cols=115  Identities=27%  Similarity=0.675  Sum_probs=87.3

Q ss_pred             cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC----cCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCC
Q psy826          104 PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN----ECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKG  178 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~----~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~  178 (329)
                      +|....++|.++++|++   +.++|+|.|++||+|..|+    +|..              .+|...  ++|. ..+++.
T Consensus         7 eC~~~~~~C~~~g~C~~---~~g~~~C~C~~Gy~G~~C~~~~~~C~~--------------~~C~~~--~~C~~~~g~~~   67 (135)
T 2vj3_A            7 ECSLGANPCEHAGKCIN---TLGSFECQCLQGYTGPRCEIDVNECVS--------------NPCQND--ATCLDQIGEFQ   67 (135)
T ss_dssp             TTTSSSCSSSTTCEEEE---CSSSEEEECCTTEESTTSCEECCTTTT--------------CCCCSS--CEEEECSSCEE
T ss_pred             cccCCCCCCCCCCEeEC---CCCCEEEECCCCCcCCcccccCccCCC--------------CCCCCC--CEEeCCCCCce
Confidence            56555678999999998   7889999999999999884    2322              245544  5676 677899


Q ss_pred             CccCCCCceecCCCCcc-cCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCccc-cc
Q psy826          179 CTKCKSGWAADKDIGCY-DINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICI-NT  256 (329)
Q Consensus       179 C~~C~~G~~~~~~~~C~-d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~-~~  256 (329)
                      | .|++||.|..   |. ++++|.. .+|..++.|+++.++|+|.                   |++||.+.  .|. ++
T Consensus        68 C-~C~~G~~G~~---C~~~~~~C~~-~~C~~~g~C~~~~g~~~C~-------------------C~~G~~G~--~C~~~i  121 (135)
T 2vj3_A           68 C-ICMPGYEGVH---CEVNTDECAS-SPCLHNGRCLDKINEFQCE-------------------CPTGFTGH--LCQVDL  121 (135)
T ss_dssp             E-ECCTTEESSS---SCEECCTTTT-CCSTTTCEEEECSSCEEEE-------------------CCTTEESS--SSCEEC
T ss_pred             e-eCCCCCcCCc---ceecCCcccC-CCcCCCCEeECCCCCeEEE-------------------CCCCCcCC--ccCccC
Confidence            9 9999999753   64 7889986 6898889999999999999                   99999875  674 67


Q ss_pred             CcCCCCc
Q psy826          257 QAKSQNT  263 (329)
Q Consensus       257 ~~~~~~~  263 (329)
                      +++...+
T Consensus       122 ~~C~~~~  128 (135)
T 2vj3_A          122 HHILDAQ  128 (135)
T ss_dssp             C------
T ss_pred             ccccCCC
Confidence            7776543

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=99.39  E-value=3.1e-13  Score=111.01  Aligned_cols=122  Identities=24%  Similarity=0.564  Sum_probs=54.8

Q ss_pred             Cc-hhhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhhccCCcccCCCccceeecccccCcCC
Q psy826           16 DT-AWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCP   94 (329)
Q Consensus        16 ~~-~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~C~~~~~~~C~   94 (329)
                      |+ .+||.+.|++++      ||+|++|.     .++..++++..+.+.. +|....+                      
T Consensus         2 ~~~~~ee~~~g~ler------eC~ee~C~-----~eea~eif~~~~~t~~-~~~~c~d----------------------   47 (146)
T 1x7a_L            2 NSGKLEEFVRGNLER------ECIEEKCS-----FEEAREVFENTEKTNE-FWKQYVD----------------------   47 (146)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccchhhhcCCCccc------cccCCcCC-----CHhhhhhhcCcchhhh-hhccCCC----------------------
Confidence            56 689999999999      99999999     7788888777665533 3322111                      


Q ss_pred             CCCCCCCCccCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC---cCCCCccccccCcCCCCCcCCcccccCCc
Q psy826           95 VDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN---ECNTGYFQSYKDEKTILCSKCHASCESGC  171 (329)
Q Consensus        95 ~G~~G~~C~~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~---~C~~g~y~~~~~~~~~~C~~C~~~C~~~C  171 (329)
                             -.+|.  .++|.++++|++   +.++|.|.|++||+|..|+   +|...                ...|.++|
T Consensus        48 -------ideC~--~~pC~n~g~C~~---~~~~y~C~C~~G~~G~~C~~~deC~~~----------------~~~C~~~C   99 (146)
T 1x7a_L           48 -------GDQCE--PNPCLNGGLCKD---DINSYECWCQVGFEGKNCELDATCNIK----------------NGRCKQFC   99 (146)
T ss_dssp             ---------CCS--SCSSCTTCEEEE---CSSCEEEECCSSEESTTTCEECCTTSG----------------GGSCSSBC
T ss_pred             -------cCcCC--CCCCCCCCEeEC---CCCCEEEecCCCCcCCcCCCCccccCC----------------CCCCcCCC
Confidence                   01343  357988899998   7889999999999999883   34321                12233456


Q ss_pred             -c-cCCCCCCccCCCCceecCCC-CcccCCCC
Q psy826          172 -S-TGGPKGCTKCKSGWAADKDI-GCYDINEC  200 (329)
Q Consensus       172 -~-~~~~~~C~~C~~G~~~~~~~-~C~d~~eC  200 (329)
                       . ..++|.| .|++||.+..++ .|.++++.
T Consensus       100 ~~n~~g~y~C-~C~~Gy~l~~dG~~C~~~~~~  130 (146)
T 1x7a_L          100 KTGADSKVLC-SCTTGYRLAPDQKSCKPAVPF  130 (146)
T ss_dssp             CCCSSSCCCC-BCCTTEEECTTSSSEEECSSS
T ss_pred             CCCCCCCEEe-EcCCCcEeCCCCCcCCCCCCC
Confidence             4 6788999 999999987643 58877654

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.33  E-value=4.5e-14  Score=120.75  Aligned_cols=121  Identities=26%  Similarity=0.654  Sum_probs=93.0

Q ss_pred             ceeecccccCcCCCCCCCC---CCc---cCCCC--CCCCCCCCcccCCCCCC-----CCceeecCCCCCCCCC----CcC
Q psy826           82 TWLCINKLKRCCPVDHYGA---DCK---PCLGF--PNVCFGNGKCKGNGTRK-----GNGQCVCNKEYTGELC----NEC  144 (329)
Q Consensus        82 ~~~C~~~~~~~C~~G~~G~---~C~---~C~~~--~~~C~~~~~C~~~~~~~-----gs~~C~C~~G~~g~~C----~~C  144 (329)
                      .|.|.      |++||.|.   .|+   +|...  .++|.++++|++   +.     ++|+|.|++||+|..+    ++|
T Consensus        24 ~~~C~------C~~G~~g~~~~~C~~id~C~~~~~~~~C~~~~~C~~---~~~~~~~g~y~C~C~~G~~g~~~~C~~d~C   94 (186)
T 1z1y_A           24 HFXCM------CNEGLVHLSENTCEEXNECXXETLGXACGEFGQCIE---NPDPAQVNMYXCGCIEGYTLXEDTCVLDVC   94 (186)
T ss_dssp             CEEEE------ECTTEEEEETTEEEECCCCSGGGTTSEEETTEEEEE---CSSTTSSCSEEEEECTTEEEETTEEEEGGG
T ss_pred             CeEeE------CCCCCccCCCCccCCCCcccCCCCCCCCCCCCEeec---CCCCcCCCCEECCCCCCCccCCCCCCCCcC
Confidence            46676      99999976   674   57533  567988899998   56     8999999999998754    344


Q ss_pred             CCCccccccCcCCCCCcCCcccccCCcc-----cCCCCCCccCCCCceecC--CCCcccC--CCCCCCCCC-CCCceeec
Q psy826          145 NTGYFQSYKDEKTILCSKCHASCESGCS-----TGGPKGCTKCKSGWAADK--DIGCYDI--NECSDENIC-SGNQFCVN  214 (329)
Q Consensus       145 ~~g~y~~~~~~~~~~C~~C~~~C~~~C~-----~~~~~~C~~C~~G~~~~~--~~~C~d~--~eC~~~~~C-~~~~~C~n  214 (329)
                      ..              .+|...  ++|.     ..+++.| .|++||.|..  ...|.++  ++|..  +| ..++.|++
T Consensus        95 ~~--------------~~C~~~--g~C~~~~~~~~g~~~C-~C~~Gy~g~~~~~~~C~~~~~~~C~~--~C~~~~~~C~n  155 (186)
T 1z1y_A           95 QY--------------XNCGES--GECIVEYLSEIQSAGC-SCAIGXVPNPEDEXXCTXTGETACQL--XCNTDNEVCXN  155 (186)
T ss_dssp             TT--------------CCCCTT--EEEEEEEETTEEEEEE-EECTEEEEETTTTTEEEEEECCCCCC--CCCTTTEEEEE
T ss_pred             cC--------------CCCCCC--CEEeeCCcCCCCCceE-ECCCCCcccCCCCCcceEcCCCcccc--cccccCcceec
Confidence            33              135432  3443     4567999 9999999953  2459876  88985  89 88899999


Q ss_pred             CCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          215 TEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       215 ~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      +.++|+|.                   |++||.++
T Consensus       156 ~~g~y~C~-------------------C~~G~~g~  171 (186)
T 1z1y_A          156 VEGVYXCQ-------------------CMEGFTFD  171 (186)
T ss_dssp             ETTEEEEE-------------------ECTTCEEE
T ss_pred             CCCCeeeE-------------------CCCCCccC
Confidence            99999999                   99999987

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=99.31  E-value=7.4e-13  Score=108.33  Aligned_cols=113  Identities=28%  Similarity=0.629  Sum_probs=83.1

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCC---------CCCcCCCCccccccCcCCCCC-cCCcccccCCcc-cCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGE---------LCNECNTGYFQSYKDEKTILC-SKCHASCESGCS-TGGPKG  178 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~---------~C~~C~~g~y~~~~~~~~~~C-~~C~~~C~~~C~-~~~~~~  178 (329)
                      ++|.++++|++      .|+|.|++||+|.         .|+   +      +++....- .+|...  ++|. .+++|.
T Consensus         7 ~~C~~~~~C~~------~~~C~C~~G~~g~~~~~~~~~~~C~---d------ideC~~~~~~~C~~~--~~C~n~~g~y~   69 (143)
T 2bou_A            7 RWCPQDSSCVN------ATACRCNPGFSSFSEIITTPMETCD---D------INECATLSKVSCGKF--SDCWNTEGSYD   69 (143)
T ss_dssp             TTCCTTEEESS------SSCEEECTTEECSSSSBCSTTCCCE---E------CCGGGC----CCCTT--EEEEECSSCEE
T ss_pred             CcCCCCCEEcC------CCEEeCCCCCcCccccccCCCCcCC---c------cccccCCCCCCCCCC--CEEEcCCCCeE
Confidence            56888999986      2899999999984         451   1      22211110 134433  4676 678899


Q ss_pred             CccCCCCceecCC---------CCcccCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccc
Q psy826          179 CTKCKSGWAADKD---------IGCYDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKL  248 (329)
Q Consensus       179 C~~C~~G~~~~~~---------~~C~d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~  248 (329)
                      | .|++||.+...         ..|+|++||... .+|.+++.|+|+.|+|+|.                   |++||.+
T Consensus        70 C-~C~~Gy~g~~~~~~~~~~~~~~C~dideC~~~~~~C~~~~~C~n~~g~y~C~-------------------C~~Gy~g  129 (143)
T 2bou_A           70 C-VCSPGYEPVSGAKTFKNESENTCQDVDECSSGQHQCDSSTVCFNTVGSYSCR-------------------CRPGWKP  129 (143)
T ss_dssp             E-EECTTEEETTCCSCBSSGGGCCEEECCHHHHTCCCCCTTSEEEECSSCEEEE-------------------CCSSSCB
T ss_pred             e-ECCCCcccCcCccccccCCCCCcCCccCccCcCCCCCCCCEEECCCCCEEee-------------------CCCCccc
Confidence            9 99999999752         369999999864 6899889999999999999                   9999998


Q ss_pred             c--CCcccccCcC
Q psy826          249 Q--QNICINTQAK  259 (329)
Q Consensus       249 ~--~~~C~~~~~~  259 (329)
                      .  ...|.+..++
T Consensus       130 ~~~~~~C~~~~~C  142 (143)
T 2bou_A          130 RHGIPNNQKDTVC  142 (143)
T ss_dssp             CTTCCSSBTTCCB
T ss_pred             CCCCccCccCCcc
Confidence            7  3456665543

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=99.29  E-value=1.2e-12  Score=107.10  Aligned_cols=127  Identities=25%  Similarity=0.613  Sum_probs=88.4

Q ss_pred             CchhhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhhccCCcccCCCccceeecccccCcCCC
Q psy826           16 DTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPV   95 (329)
Q Consensus        16 ~~~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~C~~~~~~~C~~   95 (329)
                      |+.+||.+.|++++      ||+|++|.     ..++.++++...... .+|....+     -                 
T Consensus         2 ~~~~ee~~~g~ler------eC~ee~C~-----~ee~~e~~~~~~~~~-~f~~~c~d-----i-----------------   47 (142)
T 2c4f_L            2 NAFLEELRPGSLER------ECKEEQCS-----FEEAREIFKDAERTK-LFWISYSD-----G-----------------   47 (142)
T ss_dssp             --CGGGGSCCCHHH------HTTTSCCC-----HHHHHHHHCSHHHHH-HHHHHHTT-----C-----------------
T ss_pred             cchhhhhccCcccc------ccccCccc-----Ccchhhhhhcccccc-cccccCCc-----c-----------------
Confidence            67789999999999      99999999     778888887766554 45643322     0                 


Q ss_pred             CCCCCCCccCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcCCCCCcCC-cccccCCcc-c
Q psy826           96 DHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKC-HASCESGCS-T  173 (329)
Q Consensus        96 G~~G~~C~~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~C-~~~C~~~C~-~  173 (329)
                             .+|.  .++|.++++|++   +.++|.|.|++||+|..|+.   .     .++. ..| +| +..|.++|. .
T Consensus        48 -------d~C~--~~pC~n~g~C~~---~~g~y~C~C~~G~~G~~C~~---~-----~~~c-~~c-~~~~~~C~~~C~~~  105 (142)
T 2c4f_L           48 -------DQCA--SSPCQNGGSCKD---QLQSYICFCLPAFEGRNCET---H-----KDDQ-LIC-VNENGGCEQYCSDH  105 (142)
T ss_dssp             -------CGGG--GCCCCTTCEEEE---ETTEEEEECCTTEESTTSCE---E-----GGGC-CST-TTGGGGCSSEEECC
T ss_pred             -------CcCc--CCCcCCCCEEeC---CCCCEEeeCCCCccCCcccc---C-----cccc-ccc-cCCCCCccCEeECC
Confidence                   1332  356988899998   78899999999999998842   0     0000 001 11 234545676 6


Q ss_pred             CC-CCCCccCCCCceecCCC-CcccCCC
Q psy826          174 GG-PKGCTKCKSGWAADKDI-GCYDINE  199 (329)
Q Consensus       174 ~~-~~~C~~C~~G~~~~~~~-~C~d~~e  199 (329)
                      .+ +|.| .|++||.+..++ .|.++++
T Consensus       106 ~g~~y~C-~C~~Gy~l~~dG~~C~~~~e  132 (142)
T 2c4f_L          106 TGTKRSC-RCHEGYSLLADGVSCTPTVE  132 (142)
T ss_dssp             TTSCCEE-ECCTTEEECTTSSCEEESSS
T ss_pred             CCCCEEE-ECCCCceECCCCCCCCCCCc
Confidence            67 8999 999999987643 5887765

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=99.23  E-value=1.1e-12  Score=112.55  Aligned_cols=120  Identities=26%  Similarity=0.561  Sum_probs=23.4

Q ss_pred             hhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhhccCCcccCCCccceeecccccCcCCCCCCC
Q psy826           20 EEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYG   99 (329)
Q Consensus        20 ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~C~~~~~~~C~~G~~G   99 (329)
                      ||.|+|+++|      ||+|++|+     +++++++++..+... .+|....+                           
T Consensus         1 ee~~~gnler------EC~Ee~Cs-----~EEarEiF~~~~~t~-~fw~~c~d---------------------------   41 (195)
T 1nfu_B            1 EEMKKGHLER------ECMEETCS-----YEEAREVFEDSDKTN-EFWNKYKD---------------------------   41 (195)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCcccCcchh------hhhcCcCC-----hHHhhhhhhcccccc-cccccCCC---------------------------
Confidence            8999999999      99999999     889999988877764 34432211                           


Q ss_pred             CCCccCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCC
Q psy826          100 ADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKG  178 (329)
Q Consensus       100 ~~C~~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~  178 (329)
                        -.+|.  .++|.++++|++   ..++|.|.|++||+|..|+.   .     +   ...|..-...|.++|. ..++|.
T Consensus        42 --ideC~--~~pC~ngg~C~n---~~g~y~C~C~~Gf~G~~Ce~---~-----i---~deC~~~~~~C~~~C~n~~gsy~  103 (195)
T 1nfu_B           42 --GDQCE--TSPCQNQGKCKD---GLGEYTCTCLEGFEGKNCEL---F-----T---RKLCSLDNGDCDQFCHEEQNSVV  103 (195)
T ss_dssp             ---------------------------------------------------------CCGGGTGGGGCSSEEEEETTEEE
T ss_pred             --CcccC--CCCCCCCCEeEC---CCCCeeEeCCCCceeccccc---c-----c---cccccCCCCCCCCEeECCCCCeE
Confidence              01343  356988899998   78899999999999998841   0     0   0012110123334566 678899


Q ss_pred             CccCCCCceecCCC-CcccC
Q psy826          179 CTKCKSGWAADKDI-GCYDI  197 (329)
Q Consensus       179 C~~C~~G~~~~~~~-~C~d~  197 (329)
                      | .|++||.+..++ .|.++
T Consensus       104 C-~C~~Gy~l~~dG~~C~~~  122 (195)
T 1nfu_B          104 C-SCARGYTLADNGKACIPT  122 (195)
T ss_dssp             E-ECCTTEEECTTSSCEEES
T ss_pred             E-ECCCCceeCCCCCccccC
Confidence            9 999999976643 47655

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=99.22  E-value=7.4e-12  Score=102.15  Aligned_cols=111  Identities=26%  Similarity=0.587  Sum_probs=77.8

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCCc---CCCCccccccCcCCCCCc--CCcccccCCcc--------cCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNE---CNTGYFQSYKDEKTILCS--KCHASCESGCS--------TGG  175 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~---C~~g~y~~~~~~~~~~C~--~C~~~C~~~C~--------~~~  175 (329)
                      .++|.++++|++.. ..++|+|.|++||+|..|+.   +......   -.....|.  +|...  ++|.        ..+
T Consensus         5 ~~pC~~~g~C~~~~-~~g~~~C~C~~G~~G~~C~~~~~~~~~~~~---c~~~~~C~~~~C~~~--g~C~~~~~~~~~~~~   78 (143)
T 4d90_A            5 PNPCENGGICLPGL-ADGSFSCECPDGFTDPNCSSVVEVASDEEE---PTSAGPCTPNPCHNG--GTCEISEAYRGDTFI   78 (143)
T ss_dssp             SCCCGGGCEEEC------CCEEECCTTCCTTTTCSCCCCTTTTTS---CCCCCTTSSCCCCTT--CEEEECCCEETTEEC
T ss_pred             CCcCCCCCEeeCCC-CCCCEEeECCCCCCCCCCccCccccccccc---cccCCcCCCCCCCCC--CEecCCCccccCCCC
Confidence            46799899999611 12689999999999999853   2211100   00111222  34443  4564        346


Q ss_pred             CCCCccCCCCceecCCCCcc-cCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          176 PKGCTKCKSGWAADKDIGCY-DINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       176 ~~~C~~C~~G~~~~~~~~C~-d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      ++.| .|++||.|.   .|. ++++|.. .+|..++.|+++.++|+|.                   |++||.++
T Consensus        79 ~~~C-~C~~G~~G~---~C~~~i~~C~~-~~C~~~~~C~~~~g~~~C~-------------------C~~G~~G~  129 (143)
T 4d90_A           79 GYVC-KCPRGFNGI---HCQHNINECEV-EPCKNGGICTDLVANYSCE-------------------CPGEFMGR  129 (143)
T ss_dssp             CEEE-ECCTTEEST---TSCEECCTTTT-CCSCTTCEEEEETTEEEEE-------------------CCTTCBST
T ss_pred             CeEe-ECcCCCcCC---CcccCCCcCCC-CCCCCCCEeECCCCCeEeE-------------------CCCCCccC
Confidence            7899 999999864   576 9999986 6899899999999999999                   99999987

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=99.20  E-value=2.1e-11  Score=121.46  Aligned_cols=117  Identities=26%  Similarity=0.602  Sum_probs=91.3

Q ss_pred             CCCCCCCCcccCCCCCC-CCcee-ecCCCCCC--CCCC---cCCCCccccccCcCCCCCcCCcccccC---Ccc-cCCCC
Q psy826          109 PNVCFGNGKCKGNGTRK-GNGQC-VCNKEYTG--ELCN---ECNTGYFQSYKDEKTILCSKCHASCES---GCS-TGGPK  177 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~-gs~~C-~C~~G~~g--~~C~---~C~~g~y~~~~~~~~~~C~~C~~~C~~---~C~-~~~~~  177 (329)
                      .++|.++++|++   +. ++|+| .|++||+|  ..|.   +|..            .-..|...  +   +|. ..++|
T Consensus         8 ~nPC~~gg~C~n---~~~Gsy~C~~C~~GytGdg~~CeDiDEC~~------------~p~~C~~g--g~~~~CvNt~gsY   70 (634)
T 1yo8_A            8 SNPCFPGAQCSS---FPDGSWSCGFCPVGFLGNGTHCEDLDECAL------------VPDICFST--SKVPRCVNTQPGF   70 (634)
T ss_dssp             GCCSCTTCCEEE---CTTSCEEECCCCTTBCSCSSSCCBCCTTTT------------SCCCSCCC--SSSCCEEECSSSE
T ss_pred             CCCCCCCCEEec---CCCCCeECCcCCCccCCCCCCccccccccC------------CCCcccCC--ccccceeeccCce
Confidence            467998999997   55 45999 99999998  6773   3432            11225543  3   676 77889


Q ss_pred             CCcc-CCCCceecCC------------CCcccCCCCCCC-CCCCCCceeecCC----CCcccCCCcCCCCCCcCCccccc
Q psy826          178 GCTK-CKSGWAADKD------------IGCYDINECSDE-NICSGNQFCVNTE----GSYRCMQCDPSCNGCHGDGPDMC  239 (329)
Q Consensus       178 ~C~~-C~~G~~~~~~------------~~C~d~~eC~~~-~~C~~~~~C~n~~----gs~~C~~C~~~C~~C~g~~~~~C  239 (329)
                      .| . |++||.|...            ..|+++++|... .+|.+++.|+++.    ++|+|.                 
T Consensus        71 ~C-~~C~~Gy~G~~c~g~g~~~~~~dg~~C~dideC~~~~~pC~~~~~Cvnt~~~~~GsY~C~-----------------  132 (634)
T 1yo8_A           71 HC-LPCPPRYRGNQPVGVGLEAAKTEKQVCEPENPCKDKTHNCHKHAECIYLGHFSDPMYKCE-----------------  132 (634)
T ss_dssp             EE-CCCCTTEEECCCEESSSHHHHSCCCCEEECCTTTTTCCCCCTTEEEEECCTTCSSSEEEE-----------------
T ss_pred             ec-ccCCCCcccCccccccccccccCCCcccccccccCCCcccccCccccccccccccceeee-----------------
Confidence            99 7 9999998763            249999999875 7899999999998    999999                 


Q ss_pred             ccCcccccccCCccc---ccCcCCCC
Q psy826          240 EACAEGYKLQQNICI---NTQAKSQN  262 (329)
Q Consensus       240 ~~C~~Gy~~~~~~C~---~~~~~~~~  262 (329)
                        |++||.+++..|.   +++++...
T Consensus       133 --C~~Gy~GdG~~Ce~d~DiDeC~~~  156 (634)
T 1yo8_A          133 --CQTGYAGDGLICGEDSDLDGWPNL  156 (634)
T ss_dssp             --ECTTEEESSSSEEECTTSSSSCSS
T ss_pred             --ccCCccccCcccccccCcccccCC
Confidence              9999999888896   67776543

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=99.19  E-value=1.1e-11  Score=104.40  Aligned_cols=117  Identities=30%  Similarity=0.777  Sum_probs=86.9

Q ss_pred             eeecccccCcCCCCCCCCCCc--cCCCCCCCCC-CCCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcCCCC
Q psy826           83 WLCINKLKRCCPVDHYGADCK--PCLGFPNVCF-GNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTIL  159 (329)
Q Consensus        83 ~~C~~~~~~~C~~G~~G~~C~--~C~~~~~~C~-~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~  159 (329)
                      +.|.......|++||+|..|+  .|..   .|. .++.|.+      +++|.|++||+|..|++|...            
T Consensus        44 g~C~~~g~C~C~~G~~G~~C~~~~C~~---~C~~~~g~C~~------~~~C~C~~G~~G~~C~~C~~~------------  102 (169)
T 2vj2_A           44 YACDQNGNKTCMEGWMGPECNRAICRQ---GCSPKHGSCKL------PGDCRCQYGWQGLYCDKCIPH------------  102 (169)
T ss_dssp             EEECSSCCEEECTTEESTTSCEECCCT---TCCTTTEECSS------TTCCEECTTEESSSSCEECCC------------
T ss_pred             CEeCCCCeeECCCCCcCCCCCCCCCCC---CCCCCCcccCC------CCeeECCCCCCCCCcccCCCC------------
Confidence            556554555699999999887  3543   365 5677764      478999999999988776542            


Q ss_pred             CcCCcccccCCcccCCCCCCccCCCCceecCCCCcc-cCCCCCCCCCCCCCceeecC-CCCcccCCCcCCCCCCcCCccc
Q psy826          160 CSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCY-DINECSDENICSGNQFCVNT-EGSYRCMQCDPSCNGCHGDGPD  237 (329)
Q Consensus       160 C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~-d~~eC~~~~~C~~~~~C~n~-~gs~~C~~C~~~C~~C~g~~~~  237 (329)
                       ..|.++   +|.  +++.| .|++||.|.   .|. ++++|....+|.++..|+++ +++|+|.               
T Consensus       103 -~~C~~g---~C~--~~~~C-~C~~G~~G~---~C~~~~~~C~~~~~C~~~g~C~~~~~~~~~C~---------------  157 (169)
T 2vj2_A          103 -PGCVHG---ICN--EPWQC-LCETNWGGQ---LCDKDLNYCGTHQPCLNGGTCSNTGPDKYQCS---------------  157 (169)
T ss_dssp             -TTCSSE---ECS--STTCC-EECTTEETT---TTCEESCHHHHTCCCCTTCEEEECSTTCEEEE---------------
T ss_pred             -CCCCCC---CcC--CCCEE-eCCCCCCCC---cccCCCCCCCCCCCCCCCCEEcCCCCCCcEeE---------------
Confidence             113332   455  46899 999999974   465 88889754589988999997 7899999               


Q ss_pred             ccccCccccccc
Q psy826          238 MCEACAEGYKLQ  249 (329)
Q Consensus       238 ~C~~C~~Gy~~~  249 (329)
                          |++||.|.
T Consensus       158 ----C~~G~~G~  165 (169)
T 2vj2_A          158 ----CPEGYSGP  165 (169)
T ss_dssp             ----CCTTCCST
T ss_pred             ----CCCCCcCc
Confidence                99999875

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=99.13  E-value=5.3e-12  Score=99.87  Aligned_cols=100  Identities=25%  Similarity=0.737  Sum_probs=75.3

Q ss_pred             CCCCCCCCcccCCCCC-CCCceeecCCCCCCCCCC--cCCCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCC
Q psy826          109 PNVCFGNGKCKGNGTR-KGNGQCVCNKEYTGELCN--ECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSG  185 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~-~gs~~C~C~~G~~g~~C~--~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G  185 (329)
                      .++|.  .+|++   + .++|+|.|++||+|..++  +|..            .|.  ...|.++|...+++.| .|++|
T Consensus         9 ~~pC~--~~C~~---~~~g~y~C~C~~Gy~g~~~~~~~C~~------------~C~--~~~C~~~C~~~~~y~C-~C~~G   68 (118)
T 1dx5_I            9 RANCE--YQCQP---LDQTSYLCVCAEGFAPIPHEPHRCQM------------FCN--QTACPADCDPNTQASC-ECPEG   68 (118)
T ss_dssp             GCCCS--SEEEE---CSSSCEEEECCTTEEEETTEEEEEEE------------CCC--SSEEECEECTTSTTCE-ECCTT
T ss_pred             CCCCC--CCCCC---CCCCCEEeECCCCccccCCCCCcccc------------ccC--CCCCCCcccCCCCeEe-ECCCC
Confidence            35686  38998   7 789999999999987542  2221            111  1123235554578999 99999


Q ss_pred             ceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          186 WAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       186 ~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      |.+.....|++++||....+|  ++.|+|++++|+|.                   |++||.+.
T Consensus        69 y~~~~g~~C~dideC~~~~~C--~~~C~n~~g~y~C~-------------------C~~G~~g~  111 (118)
T 1dx5_I           69 YILDDGFICTDIDECENGGFC--SGVCHNLPGTFECI-------------------CGPDSALA  111 (118)
T ss_dssp             EEEETTTEEEECCHHHHCSSC--SSEEEECSSSEEEE-------------------ECSSSSCE
T ss_pred             ccCCCCCccccccccCCCCCC--cCeEEeCCCCEEEE-------------------CCCCCccC
Confidence            998764569999999865688  78999999999999                   99999875

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=99.11  E-value=9.3e-12  Score=100.69  Aligned_cols=121  Identities=26%  Similarity=0.558  Sum_probs=23.8

Q ss_pred             hhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhhccCCcccCCCccceeecccccCcCCCCCCC
Q psy826           20 EEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQHSKAKDSDLYTWLCINKLKRCCPVDHYG   99 (329)
Q Consensus        20 ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~~~~~~~~~~~~~~~~C~~~~~~~C~~G~~G   99 (329)
                      ||.++|+++|      ||+|++|.     .+++.++++...... .+|....+                           
T Consensus         1 ee~~~~~ler------eC~ee~C~-----~ee~~eif~~~~~~~-~~~~~c~d---------------------------   41 (134)
T 2vh0_B            1 EEMKKGHLER------ECMEETCS-----YEEAREVFEDSDKTN-EFWNKYKD---------------------------   41 (134)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCccccchHh------HhhhccCC-----HHHHHHHHhcCcccc-cccccCCC---------------------------
Confidence            7999999999      99999999     777887777655443 33321111                           


Q ss_pred             CCCccCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCC
Q psy826          100 ADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKG  178 (329)
Q Consensus       100 ~~C~~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~  178 (329)
                        -.+|.  .++|.++++|++   +.++|+|.|++||+|..|+.   .     +   ...|..-...|.++|. ..++|.
T Consensus        42 --~d~C~--~~pC~n~g~C~~---~~~~y~C~C~~G~~G~~C~~---~-----i---~d~C~~~~~~C~~~C~~~~g~y~  103 (134)
T 2vh0_B           42 --GDQCE--TSPCQNQGKCKD---GLGEYTCTCLEGFEGKNCEL---F-----T---RKLCSLDNGDCDQFCHEEQNSVV  103 (134)
T ss_dssp             ---------------------------------------------------------CCGGGTGGGGCSSEEEEETTEEE
T ss_pred             --cCcCC--CCCCCCcCCccc---CCCCEEeeCCCCccCCcccc---C-----C---CCccccCCCCCCCEeECCCCCEE
Confidence              01343  356888899998   78899999999999998842   0     0   0012110122334565 677899


Q ss_pred             CccCCCCceecCCC-CcccCC
Q psy826          179 CTKCKSGWAADKDI-GCYDIN  198 (329)
Q Consensus       179 C~~C~~G~~~~~~~-~C~d~~  198 (329)
                      | .|++||.+..++ .|.+++
T Consensus       104 C-~C~~Gy~l~~~g~~C~~~~  123 (134)
T 2vh0_B          104 C-SCARGYTLADNGKACIPTG  123 (134)
T ss_dssp             E-ECCTTEEECTTSSCEEESS
T ss_pred             E-ECCCCcEECCCCCccCcCC
Confidence            9 999999987643 477654

>1z1y_A Ookinete surface protein PVS25; four EGF-like domains, cell adhesion; HET: MLY; 2.00A {Plasmodium vivax} PDB: 1z27_A 1z3g_A

Probab=99.09  E-value=8e-12  Score=106.69  Aligned_cols=113  Identities=25%  Similarity=0.528  Sum_probs=85.4

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCC---CC---CcCCCCccccccCcCCCCCcCCcccccCCcc-cC-----CC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGE---LC---NECNTGYFQSYKDEKTILCSKCHASCESGCS-TG-----GP  176 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~---~C---~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~-----~~  176 (329)
                      .++|. +++|++   +.++|+|.|++||+|.   .|   ++|..+.          .-.+|...  ++|. ..     ++
T Consensus        10 ~~pC~-ng~C~~---~~g~~~C~C~~G~~g~~~~~C~~id~C~~~~----------~~~~C~~~--~~C~~~~~~~~~g~   73 (186)
T 1z1y_A           10 DTICX-NGQLVQ---MSNHFXCMCNEGLVHLSENTCEEXNECXXET----------LGXACGEF--GQCIENPDPAQVNM   73 (186)
T ss_dssp             TCCCB-TEEEEE---CSSCEEEEECTTEEEEETTEEEECCCCSGGG----------TTSEEETT--EEEEECSSTTSSCS
T ss_pred             CCCCC-CCEeEC---CCCCeEeECCCCCccCCCCccCCCCcccCCC----------CCCCCCCC--CEeecCCCCcCCCC
Confidence            46787 569998   7889999999999986   56   2333210          01245544  4676 55     78


Q ss_pred             CCCccCCCCceecCCCCcccCCCCCCCCCCCCCceee----cCCCCcccCCCcCCCCCCcCCcccccccCcccccc---c
Q psy826          177 KGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCV----NTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKL---Q  249 (329)
Q Consensus       177 ~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~----n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~---~  249 (329)
                      |.| .|++||.+.. ..|. +++|.. .+|.+++.|+    ++.++|+|.                   |++||.+   +
T Consensus        74 y~C-~C~~G~~g~~-~~C~-~d~C~~-~~C~~~g~C~~~~~~~~g~~~C~-------------------C~~Gy~g~~~~  130 (186)
T 1z1y_A           74 YXC-GCIEGYTLXE-DTCV-LDVCQY-XNCGESGECIVEYLSEIQSAGCS-------------------CAIGXVPNPED  130 (186)
T ss_dssp             EEE-EECTTEEEET-TEEE-EGGGTT-CCCCTTEEEEEEEETTEEEEEEE-------------------ECTEEEEETTT
T ss_pred             EEC-CCCCCCccCC-CCCC-CCcCcC-CCCCCCCEEeeCCcCCCCCceEE-------------------CCCCCcccCCC
Confidence            999 9999999986 3566 789987 5798889999    888999999                   9999999   5


Q ss_pred             CCccccc--CcCC
Q psy826          250 QNICINT--QAKS  260 (329)
Q Consensus       250 ~~~C~~~--~~~~  260 (329)
                      +..|.++  +++.
T Consensus       131 ~~~C~~~~~~~C~  143 (186)
T 1z1y_A          131 EXXCTXTGETACQ  143 (186)
T ss_dssp             TTEEEEEECCCCC
T ss_pred             CCcceEcCCCccc
Confidence            6789875  5665

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=99.07  E-value=4.4e-12  Score=105.89  Aligned_cols=114  Identities=28%  Similarity=0.642  Sum_probs=80.6

Q ss_pred             cceeecccccCcCCCCCC----CCCCcc-----CCCCCCCC--CCCCcccCCCCCCC----CceeecCCCCC-CCCCCcC
Q psy826           81 YTWLCINKLKRCCPVDHY----GADCKP-----CLGFPNVC--FGNGKCKGNGTRKG----NGQCVCNKEYT-GELCNEC  144 (329)
Q Consensus        81 ~~~~C~~~~~~~C~~G~~----G~~C~~-----C~~~~~~C--~~~~~C~~~~~~~g----s~~C~C~~G~~-g~~C~~C  144 (329)
                      ..|.|.      |++||.    |..|..     |.....+|  .+++.|++   +.+    +|.|.|++||. |..|..|
T Consensus        22 gsy~C~------C~~Gy~~~~~g~~C~d~~~~~C~~~~~~c~~~~~~~C~~---~~~~~~~~~~C~C~~G~~~~~~C~~C   92 (162)
T 1uzk_A           22 GSYICD------CPPDFELNPTRVGCVDTRSGNCYLDIRPRGDNGDTACSN---EIGVGVSKASCCCSLGKAWGTPCEMC   92 (162)
T ss_dssp             TEEEEE------CCTTCEECTTSSBEECCCCEEEEEEC----------CEE---EEEEEECHHHHHTTTCCEETTTTEEC
T ss_pred             CCEEEe------CCCCCeECCCCCcccCCCCCcccCCCcccCCCCCCcccC---CcCCcccCceeeCCCCCCcCCCcccC
Confidence            457787      999998    788862     43222333  24678887   444    78999999998 6666544


Q ss_pred             CCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCC--CceecCCC-CcccCCCCCCC-CCCCCCceeecCCCCcc
Q psy826          145 NTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKS--GWAADKDI-GCYDINECSDE-NICSGNQFCVNTEGSYR  220 (329)
Q Consensus       145 ~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~--G~~~~~~~-~C~d~~eC~~~-~~C~~~~~C~n~~gs~~  220 (329)
                      +.                         ...+++.| .|++  ||.+.... .|+|||||... ..|.+ +.|+|+.|+|+
T Consensus        93 ~~-------------------------~~~~~y~C-~C~~g~G~~~~~~~~~c~dideC~~~~~~C~~-g~C~n~~gsy~  145 (162)
T 1uzk_A           93 PA-------------------------VNTSEYKI-LCPGGEGFRPNPITVILEDIDECQELPGLCQG-GKCINTFGSFQ  145 (162)
T ss_dssp             CC-------------------------TTSHHHHH-HCTTCTTEEECTTTCCEEECCHHHHCGGGGBT-SEEEECSSCEE
T ss_pred             CC-------------------------CCCCCcee-ECCCCCCcccCCCCCccCccccccCCCCCcCC-CEeEcCCCCEE
Confidence            32                         12456889 9988  99998644 58999999864 57874 59999999999


Q ss_pred             cCCCcCCCCCCcCCcccccccCccccccc
Q psy826          221 CMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       221 C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      |.                   |++||.++
T Consensus       146 C~-------------------C~~Gy~g~  155 (162)
T 1uzk_A          146 CR-------------------CPTGYYLN  155 (162)
T ss_dssp             EE-------------------CCTTCCBC
T ss_pred             ee-------------------CCCCccCC
Confidence            99                   99999986

>2vj3_A Neurogenic locus notch homolog protein 1; transcription, metal-binding, transmembrane, developmental protein, notch signaling pathway; 2.60A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 1toz_A 2rqz_A* 2rr0_A 2rr2_A*

Probab=98.97  E-value=4.2e-10  Score=90.94  Aligned_cols=92  Identities=28%  Similarity=0.719  Sum_probs=67.5

Q ss_pred             cceeecccccCcCCCCCCCCCCc----cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC----cCCCCccccc
Q psy826           81 YTWLCINKLKRCCPVDHYGADCK----PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN----ECNTGYFQSY  152 (329)
Q Consensus        81 ~~~~C~~~~~~~C~~G~~G~~C~----~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~----~C~~g~y~~~  152 (329)
                      ..|.|.      |++||+|..|+    +|.  .++|.++++|++   ..++|+|.|++||+|..|+    +|..      
T Consensus        26 g~~~C~------C~~Gy~G~~C~~~~~~C~--~~~C~~~~~C~~---~~g~~~C~C~~G~~G~~C~~~~~~C~~------   88 (135)
T 2vj3_A           26 GSFECQ------CLQGYTGPRCEIDVNECV--SNPCQNDATCLD---QIGEFQCICMPGYEGVHCEVNTDECAS------   88 (135)
T ss_dssp             SSEEEE------CCTTEESTTSCEECCTTT--TCCCCSSCEEEE---CSSCEEEECCTTEESSSSCEECCTTTT------
T ss_pred             CCEEEE------CCCCCcCCcccccCccCC--CCCCCCCCEEeC---CCCCceeeCCCCCcCCcceecCCcccC------
Confidence            346777      99999999986    464  367988899998   7889999999999999884    2322      


Q ss_pred             cCcCCCCCcCCcccccCCcc-cCCCCCCccCCCCceecCCCCc-ccCCCCCCC
Q psy826          153 KDEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWAADKDIGC-YDINECSDE  203 (329)
Q Consensus       153 ~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C-~d~~eC~~~  203 (329)
                              .+|...  ++|. ..+++.| .|++||.|.   .| .++++|...
T Consensus        89 --------~~C~~~--g~C~~~~g~~~C-~C~~G~~G~---~C~~~i~~C~~~  127 (135)
T 2vj3_A           89 --------SPCLHN--GRCLDKINEFQC-ECPTGFTGH---LCQVDLHHILDA  127 (135)
T ss_dssp             --------CCSTTT--CEEEECSSCEEE-ECCTTEESS---SSCEECC-----
T ss_pred             --------CCcCCC--CEeECCCCCeEE-ECCCCCcCC---ccCccCccccCC
Confidence                    245544  5676 6778999 999999975   46 488888764

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=98.95  E-value=2.4e-11  Score=99.73  Aligned_cols=117  Identities=30%  Similarity=0.609  Sum_probs=73.7

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCC-CcCC--------CCccccccCcCCCCCcCCccccc--------CCcc
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELC-NECN--------TGYFQSYKDEKTILCSKCHASCE--------SGCS  172 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C-~~C~--------~g~y~~~~~~~~~~C~~C~~~C~--------~~C~  172 (329)
                      +||. +++|++   +.++|+|.|++||+|..+ ..|.        .++.+.........|.. ...|.        ..|.
T Consensus        10 ~pC~-ng~C~n---~~g~y~C~C~~G~~g~~~~~~C~~~~~~~C~~~~~g~~C~~~~~~c~~-~~~C~~~~g~~~g~~C~   84 (147)
T 2w86_A           10 SPCI-NGVCKN---SPGSFICECSSESTLDPTKTICIETIKGTCWQTVIDGRCEININGATL-KSQCCSSLGAAWGSPCT   84 (147)
T ss_dssp             CCSB-TSEEEE---ETTEEEEECCTTEEECTTSSBEEECCCEEEEEEEETTEEEEEEEEEEC-HHHHHTTTCSEETTTTE
T ss_pred             CCCC-CCEeEC---CCCCEEeECCCCcccCCCCCeecCCCCCcccCCCCCCccccCCCcccc-CCccccCcCcccCCCcc
Confidence            5687 479998   889999999999997654 2222        22111000000000000 00010        0111


Q ss_pred             cCCCCCCccCCCCceecCCCCcccCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--
Q psy826          173 TGGPKGCTKCKSGWAADKDIGCYDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--  249 (329)
Q Consensus       173 ~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--  249 (329)
                       .-.+.| .|++||.+.....|+|||||... ..|.+ ..|+|++|+|+|.                   |++||.++  
T Consensus        85 -~c~~~C-~C~~Gy~~~~g~~C~dideC~~~~~~C~~-g~C~n~~g~y~C~-------------------C~~Gy~g~~~  142 (147)
T 2w86_A           85 -LCQVDP-ICGKGYSRIKGTQCEDIDECEVFPGVCKN-GLCVNTRGSFKCQ-------------------CPSGMTLDAT  142 (147)
T ss_dssp             -ECCCCT-TTCTTEEEEETTEEEECCHHHHSTTCSSS-SEEEEETTEEEEE-------------------CCTTCCBCTT
T ss_pred             -cCCCcc-cCCCccccCCCCccCccccccCCCCCCCC-CEEECCCCCEEee-------------------CCCCCccCCC
Confidence             012788 99999987544569999999864 56985 4999999999999                   99999987  


Q ss_pred             CCcc
Q psy826          250 QNIC  253 (329)
Q Consensus       250 ~~~C  253 (329)
                      +..|
T Consensus       143 ~~~C  146 (147)
T 2w86_A          143 GRIC  146 (147)
T ss_dssp             SSCB
T ss_pred             CCee
Confidence            3445

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.92  E-value=1.3e-09  Score=104.44  Aligned_cols=86  Identities=30%  Similarity=0.870  Sum_probs=62.3

Q ss_pred             CcCCCCCCCCCCc-cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCCc-CCCCccccccCcCCCCCcCCccccc
Q psy826           91 RCCPVDHYGADCK-PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNE-CNTGYFQSYKDEKTILCSKCHASCE  168 (329)
Q Consensus        91 ~~C~~G~~G~~C~-~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~-C~~g~y~~~~~~~~~~C~~C~~~C~  168 (329)
                      ..|++||+|+.|+ .|    .+|.++++|.+     +++.|.|++||+|..|+. |.++||+....   ..|. ++..|.
T Consensus       187 c~C~~g~~G~~C~~~C----~~C~~~G~C~~-----~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~---~~C~-~~~~C~  253 (423)
T 2gy5_A          187 RRCEAQKWGPECNHLC----TACMNNGVCHE-----DTGECICPPGFMGRTCEKACELHTFGRTCK---ERCS-GQEGCK  253 (423)
T ss_dssp             CSSCTTEESTTSCEEC----CCCCTTCEECT-----TTCCEECCTTEESTTSCEECCTTEESTTSC---EECC-STTTTT
T ss_pred             CcCCCCCCCCCCCCCC----CCCCCCCEEEC-----CCCcEeCCCCccCCCcccccCCCCCCCCcC---ccCC-CCCCCC
Confidence            3499999999998 35    36999999984     468999999999999975 99999864322   1232 122232


Q ss_pred             --CCcccCCCCCCccCCCCceecCC
Q psy826          169 --SGCSTGGPKGCTKCKSGWAADKD  191 (329)
Q Consensus       169 --~~C~~~~~~~C~~C~~G~~~~~~  191 (329)
                        +.|. ++++.| .|++||.|...
T Consensus       254 ~~g~C~-~~~~~C-~C~~G~~G~~C  276 (423)
T 2gy5_A          254 SYVFCL-PDPYGC-SCATGWKGLQC  276 (423)
T ss_dssp             TCCEEE-TTTTEE-ECCBTCBSGGG
T ss_pred             CCCEEC-CCCCeE-EeCCCcccccc
Confidence              2342 467899 99999988653

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.87  E-value=1.5e-09  Score=100.57  Aligned_cols=50  Identities=28%  Similarity=0.776  Sum_probs=38.2

Q ss_pred             eecccccCcCCCCCCCCCCc--cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826           84 LCINKLKRCCPVDHYGADCK--PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus        84 ~C~~~~~~~C~~G~~G~~C~--~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .|.....+.|++||+|..|+  .|.   .+|.+++.|..      .+.|.|.+||+|..|+
T Consensus       160 ~C~~~~~C~C~~G~~G~~C~~~~C~---~~C~~~G~C~~------~~~C~C~~G~~G~~C~  211 (324)
T 2ygq_A          160 FCNERRICECPDGFHGPHCEKALCT---PRCMNGGLCVT------PGFCICPPGFYGVNCD  211 (324)
T ss_dssp             EECTTSCEECCTTEESSSSCEESSS---SCCCTTCEECS------SCCEECCTTCBTTTTC
T ss_pred             EECCCCeEECCCCCcCCCCCCCCCC---CCCCCCCEEcC------CCEEeCCCCccCCCcc
Confidence            34444445599999999998  454   36888899974      3789999999998884

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=98.86  E-value=1.4e-08  Score=104.58  Aligned_cols=73  Identities=34%  Similarity=0.827  Sum_probs=59.4

Q ss_pred             ccccCCcc-cCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCc
Q psy826          165 ASCESGCS-TGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACA  243 (329)
Q Consensus       165 ~~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~  243 (329)
                      ..|.+.|. .+++|.| .|++||.+.....|.|++||.....|  .+.|+|+.|+|+|.                   |+
T Consensus       320 ~~C~~~C~~~~~~y~C-~C~~Gy~l~~g~~C~dideC~~~~~C--~~~C~n~~gsy~C~-------------------C~  377 (791)
T 3m0c_C          320 GGCSHVCNDLKIGYEC-LCPDGFQLVAQRRCEDIDECQDPDTC--SQLCVNLEGGYKCQ-------------------CE  377 (791)
T ss_dssp             GGCSSEEEECSBSEEE-ECCTTCEEETTTEEECCCCCSSSSSC--TTTCCBCSSCBCCC-------------------CC
T ss_pred             cCccccccCCCCCccc-CCCCCCccCCCCccccCcccCCCCCC--CCeeecCCCCceee-------------------cC
Confidence            34556777 7889999 99999998554679999999864667  46899999999999                   99


Q ss_pred             cccccc--CCcccccCcC
Q psy826          244 EGYKLQ--QNICINTQAK  259 (329)
Q Consensus       244 ~Gy~~~--~~~C~~~~~~  259 (329)
                      +||.+.  +..|.++.+.
T Consensus       378 ~Gy~l~~~~~~C~~~~~~  395 (791)
T 3m0c_C          378 EGFQLDPHTKACKAVGSI  395 (791)
T ss_dssp             SSEECCSSCCCCEETTSC
T ss_pred             CCCEeCCCCceeeecccc
Confidence            999985  5678877643

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.83  E-value=7.6e-10  Score=85.79  Aligned_cols=61  Identities=41%  Similarity=0.943  Sum_probs=23.1

Q ss_pred             ccCCcc-cCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccc
Q psy826          167 CESGCS-TGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEG  245 (329)
Q Consensus       167 C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~G  245 (329)
                      |.+.|. .+++|.| .|++||.+.+...|+|+|||....+|.  +.|+|+.|+|.|.                   |++|
T Consensus        39 C~~~C~n~~g~y~C-~C~~Gy~g~~g~~C~dideC~~~~~C~--~~C~n~~gsy~C~-------------------C~~G   96 (107)
T 2w2n_E           39 CSYVCNDLKIGYEC-LCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQ-------------------CEEG   96 (107)
T ss_dssp             CSSEEECCSBSCEE-ECCTTCEEETTTEEEC-------------------------------------------------
T ss_pred             CCCEeEeCCCCeEE-ECCCCccccCCCccccccccCCCCCcC--CeeecCCCCEEEE-------------------CCCC
Confidence            434565 6788999 999999997656799999998546785  6899999999999                   9999


Q ss_pred             cccc
Q psy826          246 YKLQ  249 (329)
Q Consensus       246 y~~~  249 (329)
                      |.++
T Consensus        97 y~~~  100 (107)
T 2w2n_E           97 FQLD  100 (107)
T ss_dssp             ----
T ss_pred             ceEC
Confidence            9976

>1yo8_A Thrombospondin-2; EGF, Ca(2+)-binding domains, lectin domain, disulfide, cell; HET: NAG MAN; 2.60A {Homo sapiens} PDB: 2rhp_A*

Probab=98.82  E-value=2.9e-09  Score=106.07  Aligned_cols=106  Identities=27%  Similarity=0.777  Sum_probs=77.3

Q ss_pred             eee-cccccCcCCCCCCC--CCCc---cCCCCCCCCCCCC---cccCCCCCCCCceee-cCCCCCCCCCC----------
Q psy826           83 WLC-INKLKRCCPVDHYG--ADCK---PCLGFPNVCFGNG---KCKGNGTRKGNGQCV-CNKEYTGELCN----------  142 (329)
Q Consensus        83 ~~C-~~~~~~~C~~G~~G--~~C~---~C~~~~~~C~~~~---~C~~~~~~~gs~~C~-C~~G~~g~~C~----------  142 (329)
                      |.| .      |++||.|  ..|+   +|...++.|.+++   +|++   +.++|+|. |++||+|..|.          
T Consensus        25 y~C~~------C~~GytGdg~~CeDiDEC~~~p~~C~~gg~~~~CvN---t~gsY~C~~C~~Gy~G~~c~g~g~~~~~~d   95 (634)
T 1yo8_A           25 WSCGF------CPVGFLGNGTHCEDLDECALVPDICFSTSKVPRCVN---TQPGFHCLPCPPRYRGNQPVGVGLEAAKTE   95 (634)
T ss_dssp             EEECC------CCTTBCSCSSSCCBCCTTTTSCCCSCCCSSSCCEEE---CSSSEEECCCCTTEEECCCEESSSHHHHSC
T ss_pred             eECCc------CCCccCCCCCCccccccccCCCCcccCCccccceee---ccCceecccCCCCcccCccccccccccccC
Confidence            677 6      9999997  7887   7876666699888   8998   88999998 99999988763          


Q ss_pred             --cCCCCccccccCcCCCCCcCCcccccCCcc-cC----CCCCCccCCCCceecCCCCcc---cCCCCCCC-CCCC
Q psy826          143 --ECNTGYFQSYKDEKTILCSKCHASCESGCS-TG----GPKGCTKCKSGWAADKDIGCY---DINECSDE-NICS  207 (329)
Q Consensus       143 --~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~----~~~~C~~C~~G~~~~~~~~C~---d~~eC~~~-~~C~  207 (329)
                        .|..      ++++...-.+|+..  ++|. ..    ++|.| .|++||.+.. ..|.   ++++|... ..|.
T Consensus        96 g~~C~d------ideC~~~~~pC~~~--~~Cvnt~~~~~GsY~C-~C~~Gy~GdG-~~Ce~d~DiDeC~~~~~~C~  161 (634)
T 1yo8_A           96 KQVCEP------ENPCKDKTHNCHKH--AECIYLGHFSDPMYKC-ECQTGYAGDG-LICGEDSDLDGWPNLNLVCA  161 (634)
T ss_dssp             CCCEEE------CCTTTTTCCCCCTT--EEEEECCTTCSSSEEE-EECTTEEESS-SSEEECTTSSSSCSSCCTTT
T ss_pred             CCcccc------cccccCCCcccccC--ccccccccccccceee-eccCCccccC-cccccccCcccccCCCCccc
Confidence              1322      22222211356544  4676 55    78999 9999999865 4685   89999755 6675

>2bou_A EGF-like module containing mucin-like hormone receptor-like 2 precursor; CD97, CD55, 7TM, calcium-binding, cell adhesion, EGF-LI domain; 1.90A {Homo sapiens} PDB: 2bo2_A 2box_A

Probab=98.82  E-value=7.7e-10  Score=90.21  Aligned_cols=105  Identities=25%  Similarity=0.552  Sum_probs=69.8

Q ss_pred             eecccccCcCCCCCCC---------CCCc---cCCCCC-CCCCCCCcccCCCCCCCCceeecCCCCCCCCCC--------
Q psy826           84 LCINKLKRCCPVDHYG---------ADCK---PCLGFP-NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN--------  142 (329)
Q Consensus        84 ~C~~~~~~~C~~G~~G---------~~C~---~C~~~~-~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~--------  142 (329)
                      .|++...+.|++||.|         ..|+   +|.... .+|.+++.|++   +.++|+|.|++||+|..+.        
T Consensus        14 ~C~~~~~C~C~~G~~g~~~~~~~~~~~C~dideC~~~~~~~C~~~~~C~n---~~g~y~C~C~~Gy~g~~~~~~~~~~~~   90 (143)
T 2bou_A           14 SCVNATACRCNPGFSSFSEIITTPMETCDDINECATLSKVSCGKFSDCWN---TEGSYDCVCSPGYEPVSGAKTFKNESE   90 (143)
T ss_dssp             EESSSSCEEECTTEECSSSSBCSTTCCCEECCGGGC----CCCTTEEEEE---CSSCEEEEECTTEEETTCCSCBSSGGG
T ss_pred             EEcCCCEEeCCCCCcCccccccCCCCcCCccccccCCCCCCCCCCCEEEc---CCCCeEeECCCCcccCcCccccccCCC
Confidence            3444444459999997         4674   565432 47988899998   7899999999999987542        


Q ss_pred             -cCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccCCCCceecCCC-CcccCCCC
Q psy826          143 -ECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWAADKDI-GCYDINEC  200 (329)
Q Consensus       143 -~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~-~C~d~~eC  200 (329)
                       .|.+      +++....-.+|+..  ++|. ..++|.| .|++||.+.... .|.++++|
T Consensus        91 ~~C~d------ideC~~~~~~C~~~--~~C~n~~g~y~C-~C~~Gy~g~~~~~~C~~~~~C  142 (143)
T 2bou_A           91 NTCQD------VDECSSGQHQCDSS--TVCFNTVGSYSC-RCRPGWKPRHGIPNNQKDTVC  142 (143)
T ss_dssp             CCEEE------CCHHHHTCCCCCTT--SEEEECSSCEEE-ECCSSSCBCTTCCSSBTTCCB
T ss_pred             CCcCC------ccCccCcCCCCCCC--CEEECCCCCEEe-eCCCCcccCCCCccCccCCcc
Confidence             2221      22221101245544  5676 7889999 999999998753 47766665

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=98.79  E-value=4.7e-08  Score=99.54  Aligned_cols=70  Identities=37%  Similarity=0.870  Sum_probs=57.4

Q ss_pred             cccCCcc-cCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcc
Q psy826          166 SCESGCS-TGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAE  244 (329)
Q Consensus       166 ~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~  244 (329)
                      .|.+.|. .+++|.| .|++||.+.....|.+++||.....|.  +.|+|+.|+|+|.                   |++
T Consensus       303 ~C~~~C~~~~~~~~C-~C~~G~~~~~~~~C~dideC~~~~~C~--~~C~n~~g~y~C~-------------------C~~  360 (699)
T 1n7d_A          303 GCSHVCNDLKIGYEC-LCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQ-------------------CEE  360 (699)
T ss_dssp             TSCTTCCCCTTCCCC-CCCSSSCCCSSSCCCCCCCCSSSSSCT--TTCCBCSSCBCCC-------------------CCS
T ss_pred             CcCCCcccCCCCcEE-eCCCCeEcCCCCcccCccccCCCCccc--cccccCCCCeeee-------------------eec
Confidence            4556776 7889999 999999985556799999998656784  5899999999999                   999


Q ss_pred             ccccc--CCcccccC
Q psy826          245 GYKLQ--QNICINTQ  257 (329)
Q Consensus       245 Gy~~~--~~~C~~~~  257 (329)
                      ||.+.  +..|.++.
T Consensus       361 G~~~~~~~~~C~~~~  375 (699)
T 1n7d_A          361 GFQLDPHTKACKAVG  375 (699)
T ss_dssp             SCBCCSSCCCCBCCS
T ss_pred             ccccCCCCCcccccc
Confidence            99985  45687653

>4d90_A EGF-like repeat and discoidin I-like domain-conta protein 3; RGD finger, cell adhesion, innate immunity, extracellular MA protein; HET: NGA NAG FUC; 2.60A {Homo sapiens}

Probab=98.73  E-value=7e-09  Score=84.31  Aligned_cols=86  Identities=22%  Similarity=0.634  Sum_probs=62.5

Q ss_pred             ceeecccccCcCCCCCCCCCCccCC----------C----CCCCCCCCCcccCCC----CCCCCceeecCCCCCCCCCC-
Q psy826           82 TWLCINKLKRCCPVDHYGADCKPCL----------G----FPNVCFGNGKCKGNG----TRKGNGQCVCNKEYTGELCN-  142 (329)
Q Consensus        82 ~~~C~~~~~~~C~~G~~G~~C~~C~----------~----~~~~C~~~~~C~~~~----~~~gs~~C~C~~G~~g~~C~-  142 (329)
                      .|.|.      |++||.|..|+...          .    ..++|.++++|+...    .+.++|.|.|++||+|..|+ 
T Consensus        22 ~~~C~------C~~G~~G~~C~~~~~~~~~~~~c~~~~~C~~~~C~~~g~C~~~~~~~~~~~~~~~C~C~~G~~G~~C~~   95 (143)
T 4d90_A           22 SFSCE------CPDGFTDPNCSSVVEVASDEEEPTSAGPCTPNPCHNGGTCEISEAYRGDTFIGYVCKCPRGFNGIHCQH   95 (143)
T ss_dssp             CCEEE------CCTTCCTTTTCSCCCCTTTTTSCCCCCTTSSCCCCTTCEEEECCCEETTEECCEEEECCTTEESTTSCE
T ss_pred             CEEeE------CCCCCCCCCCccCccccccccccccCCcCCCCCCCCCCEecCCCccccCCCCCeEeECcCCCcCCCccc
Confidence            46677      99999999986410          0    135688889998211    16789999999999999884 


Q ss_pred             ---cCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccCCCCceecC
Q psy826          143 ---ECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       143 ---~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~  190 (329)
                         +|..              .+|...  ++|. ..+++.| .|++||.|..
T Consensus        96 ~i~~C~~--------------~~C~~~--~~C~~~~g~~~C-~C~~G~~G~~  130 (143)
T 4d90_A           96 NINECEV--------------EPCKNG--GICTDLVANYSC-ECPGEFMGRN  130 (143)
T ss_dssp             ECCTTTT--------------CCSCTT--CEEEEETTEEEE-ECCTTCBSTT
T ss_pred             CCCcCCC--------------CCCCCC--CEeECCCCCeEe-ECCCCCccCC
Confidence               3332              245554  5676 6778999 9999999876

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.67  E-value=4.9e-09  Score=78.73  Aligned_cols=80  Identities=24%  Similarity=0.535  Sum_probs=61.0

Q ss_pred             CceeecCCCCCCCCCCcCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccCCCCceecCCCCcc--cCCCCCCC
Q psy826          127 NGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWAADKDIGCY--DINECSDE  203 (329)
Q Consensus       127 s~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~--d~~eC~~~  203 (329)
                      +|+|.|.+||+|..|+.          ++       |..   ..|. +.+++.| .|++||.     .|.  ++++|.. 
T Consensus         1 sy~C~C~~g~~g~~c~~----------~~-------c~~---~pC~n~~~~y~C-~C~~G~~-----~C~~~~~~~C~~-   53 (91)
T 1tpg_A            1 SYQVICRDEKTQMIYQQ----------HQ-------SWL---RPVLRSNRVEYC-WCNSGRA-----QCHSVPVKSCSE-   53 (91)
T ss_dssp             CCCCCCBCSSSCCBCCS----------SC-------EEE---EECSSSSCEEEE-ECSSSCC-----BCCEECEEECSS-
T ss_pred             CeeeECCCCCcCCeECC----------Cc-------ccC---CccccCCCCcEe-ECCCCCc-----ccccCcCCcccC-
Confidence            58999999999987731          11       111   1233 4667999 9999996     574  7889987 


Q ss_pred             CCCCCCceeecCC--CCcccCCCcCCCCCCcCCcccccccCcccccccCCccc
Q psy826          204 NICSGNQFCVNTE--GSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICI  254 (329)
Q Consensus       204 ~~C~~~~~C~n~~--gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~  254 (329)
                      .+|.++..|++..  ++|.|.                   |++||.|.  .|.
T Consensus        54 ~pC~ngg~C~~~~~~~~~~C~-------------------C~~G~~G~--~Ce   85 (91)
T 1tpg_A           54 PRCFNGGTCQQALYFSDFVCQ-------------------CPEGFAGK--SCE   85 (91)
T ss_dssp             CCSCTTCEEEEESSSSCEEEE-------------------CCTTCBSS--SCC
T ss_pred             CCCCCCCEeecCCCCCCeEeE-------------------CCCCCcCC--cCC
Confidence            6899999999987  899999                   99999865  664

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=98.61  E-value=1.3e-07  Score=89.90  Aligned_cols=69  Identities=38%  Similarity=0.881  Sum_probs=56.3

Q ss_pred             ccCCcc-cCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccc
Q psy826          167 CESGCS-TGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEG  245 (329)
Q Consensus       167 C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~G  245 (329)
                      |.+.|. .+++|.| .|++||.+.....|.|+|||.....|.  +.|+|+.|+|.|.                   |.+|
T Consensus        10 c~~~C~~~~~~y~C-~C~~G~~~~~~~~C~dideC~~~~~C~--~~C~n~~g~~~C~-------------------C~~g   67 (400)
T 3p5b_L           10 CSHVCNDLKIGYEC-LCPDGFQLVAQRRCEDIDECQDPDTCS--QLCVNLEGGYKCQ-------------------CEEG   67 (400)
T ss_dssp             CSSEEEECSSSEEE-ECCTTEEECSSSCEEECCCCSTTSSCS--SCCBCCSSSCBCC-------------------CCTT
T ss_pred             CCCEeECCCCCeEE-ECCCCCCcCCCCcccCchhhhccCCCC--CccCCCccceeee-------------------cccc
Confidence            445676 7888999 999999986556799999998657885  4899999999999                   9999


Q ss_pred             cccc--CCcccccC
Q psy826          246 YKLQ--QNICINTQ  257 (329)
Q Consensus       246 y~~~--~~~C~~~~  257 (329)
                      |.+.  +..|..+.
T Consensus        68 ~~~~~~~~~C~~~~   81 (400)
T 3p5b_L           68 FQLDPHTKACKAVG   81 (400)
T ss_dssp             CCCCTTTSSCCCST
T ss_pred             ccccccccceeecc
Confidence            9976  45677653

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.61  E-value=4.6e-08  Score=71.82  Aligned_cols=59  Identities=34%  Similarity=0.786  Sum_probs=50.3

Q ss_pred             Ccc-cCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccc
Q psy826          170 GCS-TGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKL  248 (329)
Q Consensus       170 ~C~-~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~  248 (329)
                      +|. ..++|.| .|++||.+.. ..|+++++|....+|.+ +.|+|+.++|+|.                   |++||.+
T Consensus        18 ~C~n~~g~y~C-~C~~Gy~~~g-~~C~dideC~~~~~C~~-~~C~n~~g~y~C~-------------------C~~G~~g   75 (82)
T 1emn_A           18 QCINTDGSYRC-ECPFGYILAG-NECVDTDECSVGNPCGN-GTCKNVIGGFECT-------------------CEEGFEP   75 (82)
T ss_dssp             EECCCSSCCCE-ECCTTEEEET-TEEEECCGGGTCCTTSS-SCEEECSSSEEEC-------------------CSSSSCC
T ss_pred             EEEecCCCEEE-ECCCCeECCC-CccCCcccccCCCCCCC-CEeECCCCCEEeE-------------------CCCCeEe
Confidence            566 6788999 9999999854 57999999985568875 5899999999999                   9999998


Q ss_pred             cC
Q psy826          249 QQ  250 (329)
Q Consensus       249 ~~  250 (329)
                      +.
T Consensus        76 ~~   77 (82)
T 1emn_A           76 GP   77 (82)
T ss_dssp             CS
T ss_pred             CC
Confidence            74

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=98.60  E-value=6.7e-08  Score=97.50  Aligned_cols=134  Identities=31%  Similarity=0.737  Sum_probs=83.8

Q ss_pred             cCCCCCCCCCCc------------cCCCCC--CCCCCCCcccCCCCCCCCceeecC----CCCCCCCCC----cCCCCcc
Q psy826           92 CCPVDHYGADCK------------PCLGFP--NVCFGNGKCKGNGTRKGNGQCVCN----KEYTGELCN----ECNTGYF  149 (329)
Q Consensus        92 ~C~~G~~G~~C~------------~C~~~~--~~C~~~~~C~~~~~~~gs~~C~C~----~G~~g~~C~----~C~~g~y  149 (329)
                      .|++||+|..|+            +|....  .+|.++|.|..       +.|.|.    +||.|..|+    .|...  
T Consensus       461 ~C~~Gy~G~~Ce~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-------g~C~C~~~~~~Gy~G~~Ce~~~~~C~~~--  531 (690)
T 3fcs_B          461 RCGPGWLGSQCECSEEDYRPSQQDECSPREGQPVCSQRGECLC-------GQCVCHSSDFGKITGKYCECDDFSCVRY--  531 (690)
T ss_dssp             EECTTCCSSSSCCSCC------CCCCSSSSSSCGGGGSEEECS-------SSEEECCCSSCCCBSTTSCBCSSCCCBS--
T ss_pred             EeCCCccCCceeeccCccCCccCCcCCCCCCCCCCCCCCEEEC-------CeeEeecCCCCCeeCCCcCcccCcCcCC--
Confidence            399999999995            244321  45888888874       799999    999999994    34321  


Q ss_pred             ccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceecCCCCc-ccCCCCCCC--CCCCCCceeecCCCCcccCCC-c
Q psy826          150 QSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGC-YDINECSDE--NICSGNQFCVNTEGSYRCMQC-D  225 (329)
Q Consensus       150 ~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C-~d~~eC~~~--~~C~~~~~C~n~~gs~~C~~C-~  225 (329)
                            ..   .+|...  ++|..   +.| .|.+||.|.... | .++++|...  ..|..+..|.+  +  +|. | .
T Consensus       532 ------~~---~~C~~~--G~C~~---g~C-~C~~Gy~G~~Ce-C~~~~~~C~~~~g~~C~~~G~C~~--g--~C~-C~~  590 (690)
T 3fcs_B          532 ------KG---EMCSGH--GQCSC---GDC-LCDSDWTGYYCN-CTTRTDTCMSSNGLLCSGRGKCEC--G--SCV-CIQ  590 (690)
T ss_dssp             ------SS---SBGGGS--EEEET---TEE-EECTTEESSSSC-EECCCTTTBCTTSSBTSSSCEEET--T--EEE-CCS
T ss_pred             ------CC---CCCCCC--CEecC---Cee-ECcCCCcCCCCc-cCCCCCcccCCCCCCCCCCCEEeC--C--EEE-CCC
Confidence                  00   134333  34543   789 999999987643 3 256677642  46777777764  1  232 2 1


Q ss_pred             CC-----C---CCCcC--CcccccccCccccccc---CCcccc
Q psy826          226 PS-----C---NGCHG--DGPDMCEACAEGYKLQ---QNICIN  255 (329)
Q Consensus       226 ~~-----C---~~C~g--~~~~~C~~C~~Gy~~~---~~~C~~  255 (329)
                      ++     |   ..|.+  .....|+.|..+|.|.   ...|..
T Consensus       591 ~Gy~G~~Ce~C~~C~~~C~~~g~Cv~C~~g~tG~~C~~~~C~~  633 (690)
T 3fcs_B          591 PGSYGDTCEKCPTCPDACTFKKECVECKKFDRGALHDENTCNR  633 (690)
T ss_dssp             TTCBSTTSCBCTTSCCTTTSCCGGGTTTTTCCSSSSSSSCSTT
T ss_pred             CCccCCCcCcCCCCCCCCCCCCCcccCCCCCccCCCCcccccc
Confidence            11     2   22322  2456888899999886   334543

>2vj2_A Jagged-1; signalling, polymorphism, glycoprotein, extracellular, developmental protein, notch signaling pathway, EGF, DSL, notch, calcium, membrane; 2.50A {Homo sapiens} PDB: 2kb9_A

Probab=98.54  E-value=2.2e-08  Score=83.89  Aligned_cols=111  Identities=28%  Similarity=0.684  Sum_probs=73.7

Q ss_pred             CCCCCCCCCCc-cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC--cCCCCccccccCcCCCCCcCCcccccC
Q psy826           93 CPVDHYGADCK-PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN--ECNTGYFQSYKDEKTILCSKCHASCES  169 (329)
Q Consensus        93 C~~G~~G~~C~-~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~--~C~~g~y~~~~~~~~~~C~~C~~~C~~  169 (329)
                      |++||+|..|+ +|.. ...|.++++|..      .++|+|.+||+|..|+  .|..            .|..=+.    
T Consensus        21 C~~g~~G~~C~~~C~~-~~~c~~~g~C~~------~g~C~C~~G~~G~~C~~~~C~~------------~C~~~~g----   77 (169)
T 2vj2_A           21 CDDYYYGFGCNKFCRP-RDDFFGHYACDQ------NGNKTCMEGWMGPECNRAICRQ------------GCSPKHG----   77 (169)
T ss_dssp             CCTTEETTTTCEECCC-EEETTEEEEECS------SCCEEECTTEESTTSCEECCCT------------TCCTTTE----
T ss_pred             CCCcCcCCCcccccCC-CCCcCCCCEeCC------CCeeECCCCCcCCCCCCCCCCC------------CCCCCCc----
Confidence            99999999997 4754 235777788863      4689999999999885  2322            1210022    


Q ss_pred             CcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          170 GCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       170 ~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      .|..  ++.| .|++||.|....      +|.....|.++ .|+   ++++|.                   |++||.+.
T Consensus        78 ~C~~--~~~C-~C~~G~~G~~C~------~C~~~~~C~~g-~C~---~~~~C~-------------------C~~G~~G~  125 (169)
T 2vj2_A           78 SCKL--PGDC-RCQYGWQGLYCD------KCIPHPGCVHG-ICN---EPWQCL-------------------CETNWGGQ  125 (169)
T ss_dssp             ECSS--TTCC-EECTTEESSSSC------EECCCTTCSSE-ECS---STTCCE-------------------ECTTEETT
T ss_pred             ccCC--CCee-ECCCCCCCCCcc------cCCCCCCCCCC-CcC---CCCEEe-------------------CCCCCCCC
Confidence            3432  4899 999999986533      24332236543 665   567887                   99999865


Q ss_pred             CCccc-ccCcCC
Q psy826          250 QNICI-NTQAKS  260 (329)
Q Consensus       250 ~~~C~-~~~~~~  260 (329)
                        .|. +++++.
T Consensus       126 --~C~~~~~~C~  135 (169)
T 2vj2_A          126 --LCDKDLNYCG  135 (169)
T ss_dssp             --TTCEESCHHH
T ss_pred             --cccCCCCCCC
Confidence              565 555543

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.51  E-value=2.7e-08  Score=73.79  Aligned_cols=59  Identities=42%  Similarity=0.932  Sum_probs=49.5

Q ss_pred             Ccc-cCCCCCCccCCCCceecC--CCCcccCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccc
Q psy826          170 GCS-TGGPKGCTKCKSGWAADK--DIGCYDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEG  245 (329)
Q Consensus       170 ~C~-~~~~~~C~~C~~G~~~~~--~~~C~d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~G  245 (329)
                      +|. .+++|.| .|++||.+..  ...|+|+|||... ..|. ++.|+|+.|+|+|.                   |++|
T Consensus        17 ~C~n~~g~y~C-~C~~Gy~~~~~~g~~C~dideC~~~~~~C~-~~~C~n~~g~y~C~-------------------C~~G   75 (86)
T 1lmj_A           17 QCVNTPGDFEC-KCDEGYESGFMMMKNCMDIDECQRDPLLCR-GGVCHNTEGSYRCE-------------------CPPG   75 (86)
T ss_dssp             CEEEETTEEEE-CCCSSEEECTTTSSSEEECCHHHHCSSTTT-TSEEEEETTEEEEE-------------------SCTT
T ss_pred             EEECCCCCEEe-eCCCCcCccCCCCCccCCcccccCCCCcCC-CCEeEcCCCCEEEE-------------------CcCC
Confidence            566 7788999 9999999753  3569999999874 4575 57999999999999                   9999


Q ss_pred             cccc
Q psy826          246 YKLQ  249 (329)
Q Consensus       246 y~~~  249 (329)
                      |.+.
T Consensus        76 ~~~~   79 (86)
T 1lmj_A           76 HQLS   79 (86)
T ss_dssp             SCCC
T ss_pred             cccC
Confidence            9986

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.51  E-value=1.1e-07  Score=70.65  Aligned_cols=50  Identities=40%  Similarity=0.967  Sum_probs=42.4

Q ss_pred             CCcc-cCCCCCCccCCCCceecCC-CCcccCCCCCCCCCCCCCceeecCCCCcccC
Q psy826          169 SGCS-TGGPKGCTKCKSGWAADKD-IGCYDINECSDENICSGNQFCVNTEGSYRCM  222 (329)
Q Consensus       169 ~~C~-~~~~~~C~~C~~G~~~~~~-~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~  222 (329)
                      ++|. .+++|.| .|++||.+... ..|++++||.. .+|.  +.|+|++|+|+|.
T Consensus        16 ~~C~n~~g~y~C-~C~~G~~~~~~g~~C~dideC~~-~~C~--~~C~n~~g~y~C~   67 (87)
T 1z6c_A           16 AVCKNIPGDFEC-ECPEGYRYNLKSKSCEDIDECSE-NMCA--QLCVNYPGGYTCY   67 (87)
T ss_dssp             SSCCCBTTBCCC-SSSTTCEEETTTTEEECCCHHHH-SCCS--SEECCCSSSCCEE
T ss_pred             CEeECCCCCEEE-ECCCCceECCCCCcCCCcCeeCC-CCCC--CEEEccCCCEEEE
Confidence            4676 6788999 99999998763 45999999976 6885  6999999999999

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=98.40  E-value=3.6e-07  Score=71.33  Aligned_cols=85  Identities=24%  Similarity=0.568  Sum_probs=55.1

Q ss_pred             CCCCCCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccCCCCceec
Q psy826          111 VCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWAAD  189 (329)
Q Consensus       111 ~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~~~  189 (329)
                      .|.++++|++   +.++|+|.|.+||+|..|+.-.+      .    ..|..=+..|.++|. ..++|.| .|++||.+.
T Consensus        21 ~C~~~g~C~~---~~~~y~C~C~~G~~G~~C~~~~~------~----~~C~~~~~~C~~~C~n~~g~y~C-~C~~G~~~~   86 (114)
T 1aut_L           21 LCCGHGTCID---GIGSFSCDCRSGWEGRFCQREVS------F----LNCSLDNGGCTHYCLEEVGWRRC-SCAPGYKLG   86 (114)
T ss_dssp             TTTTSEEECC---CSSCCCEEECTTEESTTSCEECC------S----SSSSSGGGGCSSEEEECSSSEEE-ECCTTEEEC
T ss_pred             cCCCcCCCCC---CCCCcEeeCCCCCcCCCcCcCCc------C----CcCcCCCCCCCCEeECCCCCEEe-ECCCCeeEC
Confidence            4778899998   78899999999999998842111      0    112211233445676 7788999 999999987


Q ss_pred             CCC-CcccCCCCCCCCCCCCCceee
Q psy826          190 KDI-GCYDINECSDENICSGNQFCV  213 (329)
Q Consensus       190 ~~~-~C~d~~eC~~~~~C~~~~~C~  213 (329)
                      .++ .|.++.+    .+|.....|+
T Consensus        87 ~~g~~C~~~~~----~pC~~~~~~i  107 (114)
T 1aut_L           87 DDLLQCHPAVK----FPCGRPWKRM  107 (114)
T ss_dssp             TTSSCEEECSS----SCTTCCC---
T ss_pred             CCCCccCcCcc----cCCCCCCccC
Confidence            643 4765432    3555444443

>2gy5_A Angiopoietin-1 receptor; ligand-binding domain, transferase; HET: NAG NDG; 2.90A {Homo sapiens} PDB: 2gy7_B*

Probab=98.38  E-value=2.9e-07  Score=88.12  Aligned_cols=99  Identities=26%  Similarity=0.672  Sum_probs=64.8

Q ss_pred             eecc-cccCcCCCCCCCCCCcc-CCCC-----C-CCCCCCCcccCCC-CCCCCceeecCCCCCCCCCCc-CCCCcccccc
Q psy826           84 LCIN-KLKRCCPVDHYGADCKP-CLGF-----P-NVCFGNGKCKGNG-TRKGNGQCVCNKEYTGELCNE-CNTGYFQSYK  153 (329)
Q Consensus        84 ~C~~-~~~~~C~~G~~G~~C~~-C~~~-----~-~~C~~~~~C~~~~-~~~gs~~C~C~~G~~g~~C~~-C~~g~y~~~~  153 (329)
                      .|.+ ...+.|++||.|..|+. |+..     + .+|..++.|.+.+ -..+++.|.|++||+|..|+. |++|||+...
T Consensus       210 ~C~~~~g~C~C~~G~~G~~Ce~~C~~g~~g~~C~~~C~~~~~C~~~g~C~~~~~~C~C~~G~~G~~C~~~C~~G~~G~~C  289 (423)
T 2gy5_A          210 VCHEDTGECICPPGFMGRTCEKACELHTFGRTCKERCSGQEGCKSYVFCLPDPYGCSCATGWKGLQCNEACHPGFYGPDC  289 (423)
T ss_dssp             EECTTTCCEECCTTEESTTSCEECCTTEESTTSCEECCSTTTTTTCCEEETTTTEEECCBTCBSGGGCBCCCTTBCSBTT
T ss_pred             EEECCCCcEeCCCCccCCCcccccCCCCCCCCcCccCCCCCCCCCCCEECCCCCeEEeCCCcccccccCccCCCCcCCcc
Confidence            4544 23445999999999984 6541     1 2344344444311 014679999999999999975 9999997433


Q ss_pred             CcCCCCCcCCcccccCCcccCCCCCCccCCCCceecCC
Q psy826          154 DEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKD  191 (329)
Q Consensus       154 ~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~  191 (329)
                      .   ..| +|+.+  ++|...  +.| .|++||.|...
T Consensus       290 ~---~~C-~C~ng--g~C~~~--~~C-~C~~G~~G~~C  318 (423)
T 2gy5_A          290 K---LRC-SCNNG--EMCDRF--QGC-LCSPGWQGLQC  318 (423)
T ss_dssp             C---CBC-CCTTC--CEEETT--TEE-ECCTTCBSTTS
T ss_pred             c---ccc-cCCCC--CEecCC--Cce-ECCCCCcCCCC
Confidence            2   233 46555  567633  349 99999998753

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=98.35  E-value=5.8e-07  Score=84.92  Aligned_cols=71  Identities=35%  Similarity=0.928  Sum_probs=22.1

Q ss_pred             cccCCcc-cCCCCCCccCCCCceecCC-CCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCc
Q psy826          166 SCESGCS-TGGPKGCTKCKSGWAADKD-IGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACA  243 (329)
Q Consensus       166 ~C~~~C~-~~~~~~C~~C~~G~~~~~~-~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~  243 (329)
                      .|.+.|. ..+++.| .|++||.+..+ ..|.|++||.....|.+  .|+|+.|+|.|.                   |+
T Consensus        12 ~c~~~C~~~~g~~~C-~C~~G~~l~~~~~~C~d~~eC~~~~~C~~--~C~~~~g~~~C~-------------------C~   69 (386)
T 3v65_B           12 GCAQKCQMIRGAVQC-TCHTGYRLTEDGRTCQDVNECAEEGYCSQ--GCTNSEGAFQCW-------------------CE   69 (386)
T ss_dssp             -----------------------------------------CCTT--EEC-----CCEE-------------------CC
T ss_pred             CCCCCCcCCCCCcEe-ECCCCceECCCCCccCccceeCCcCcccC--cCCCCCCCCeEE-------------------EC
Confidence            3445665 5677999 99999998664 45999999984478954  599999999999                   99


Q ss_pred             cccccc--CCcccccCc
Q psy826          244 EGYKLQ--QNICINTQA  258 (329)
Q Consensus       244 ~Gy~~~--~~~C~~~~~  258 (329)
                      +||.+.  +..|....+
T Consensus        70 ~g~~l~~d~~~C~~~~~   86 (386)
T 3v65_B           70 AGYELRPDRRSCKALGP   86 (386)
T ss_dssp             TTEEECTTSSCEEECSS
T ss_pred             CCceEcCCCCeECCccc
Confidence            999965  567876654

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=98.27  E-value=1.5e-06  Score=72.21  Aligned_cols=41  Identities=27%  Similarity=0.641  Sum_probs=32.6

Q ss_pred             CCCCCCcccCCCCCCCCcee-ecCCCCCCCCCCcCCCCccccc
Q psy826          111 VCFGNGKCKGNGTRKGNGQC-VCNKEYTGELCNECNTGYFQSY  152 (329)
Q Consensus       111 ~C~~~~~C~~~~~~~gs~~C-~C~~G~~g~~C~~C~~g~y~~~  152 (329)
                      +|.++++|.... ..+.++| .|++||+|..|+.|++|||+..
T Consensus         2 ~C~~~g~C~~~~-~~g~~~C~~C~~g~~G~~Ce~C~~g~~g~~   43 (162)
T 1klo_A            2 PCPGGSSCAIVP-KTKEVVCTHCPTGTAGKRCELCDDGYFGDP   43 (162)
T ss_dssp             CSCTTCCEEECS-SSCCEEECSCCTTEESTTSCEECTTEEEET
T ss_pred             cCcCcCcccccC-CCCCEEeCCCCCCCcCCCCcCCCCCCcCCc
Confidence            377788997511 1357899 6999999999999999999854

>2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY crystallography, neuregulins, heparin-binding, cell CY signaling protein; HET: NAG NDG; 2.40A {Homo sapiens} PDB: 3u2p_A*

Probab=98.24  E-value=5.4e-07  Score=90.25  Aligned_cols=112  Identities=29%  Similarity=0.691  Sum_probs=76.5

Q ss_pred             CCCceee-cCCCCCCCCC-CcCCCCccccccCcCCCCCcCCcccccC------CcccCCCCCCccCCCCceecCCCCccc
Q psy826          125 KGNGQCV-CNKEYTGELC-NECNTGYFQSYKDEKTILCSKCHASCES------GCSTGGPKGCTKCKSGWAADKDIGCYD  196 (329)
Q Consensus       125 ~gs~~C~-C~~G~~g~~C-~~C~~g~y~~~~~~~~~~C~~C~~~C~~------~C~~~~~~~C~~C~~G~~~~~~~~C~d  196 (329)
                      ++.-.|. |..-+.+..| ..|+.++|..........|.+||..|..      +|.+++...|+.|.. |. .. +.|+ 
T Consensus       491 p~~~~C~sC~~~~~~~~Cv~~Cp~~~~~~~~~~~~~~C~~Ch~~C~~~~~~~~tC~Gp~~~~C~~C~~-~~-~~-~~Cv-  566 (617)
T 2ahx_A          491 PGPDQCLSCRRFSRGRICIESCNLYDGEFREFENDSICVECDPQCEKMEDGLLTCHGPGPDNCTKCSH-FK-DG-PNCV-  566 (617)
T ss_dssp             SSTTSBSSBSSEEETTEEESCCSSSSSSSCEEEETTEEEECCTTBCCCCTTCCSBSSSSTTSBSSBSS-EE-ET-TEEE-
T ss_pred             CCchhhhhccccccCCeeccccCCCcCcccccCCCCchhhcChhhhccccCCCccCCCCCCccccCcc-cc-cC-Ccee-
Confidence            3344564 6542335567 6788876532111235679999999962      688888899999984 33 22 3454 


Q ss_pred             CCCCCCCCCCCCCceeec------CCCCcccCCCcCCCC-CCcCCcccccccCccccc
Q psy826          197 INECSDENICSGNQFCVN------TEGSYRCMQCDPSCN-GCHGDGPDMCEACAEGYK  247 (329)
Q Consensus       197 ~~eC~~~~~C~~~~~C~n------~~gs~~C~~C~~~C~-~C~g~~~~~C~~C~~Gy~  247 (329)
                           .  .|+.+.+-.+      ...+..|.+||+.|. +|.|+++.+|++|+++|+
T Consensus       567 -----~--~CP~G~~~~~~~~~~y~~~~~~C~~Ch~~C~~~C~Gp~~~~C~sC~~~y~  617 (617)
T 2ahx_A          567 -----E--KCPDGLQGANSFIFKYADPDRECHPCHPNCTQGCNGPTSHDCIYYPWTGH  617 (617)
T ss_dssp             -----S--SCCEEEEBSSSEEEEEECTTSBEEECCTTCTTCBSSSSTTCBCCCTTSCC
T ss_pred             -----c--cCCCCcccccccceeccCCCCcccccCccccccCCCCCCCcCCCCCCCCC
Confidence                 3  6776654222      135778999999999 899999999999999884

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=98.23  E-value=4.8e-07  Score=91.08  Aligned_cols=100  Identities=27%  Similarity=0.664  Sum_probs=63.9

Q ss_pred             cCcCCCCCCCCCCc-------------cCCCC--CCCCCCCCcccCCCCCCCCceeecC------CCCCCCCCC----cC
Q psy826           90 KRCCPVDHYGADCK-------------PCLGF--PNVCFGNGKCKGNGTRKGNGQCVCN------KEYTGELCN----EC  144 (329)
Q Consensus        90 ~~~C~~G~~G~~C~-------------~C~~~--~~~C~~~~~C~~~~~~~gs~~C~C~------~G~~g~~C~----~C  144 (329)
                      .+.|++||+|..|+             .|...  ..+|.++|.|..       ++|.|.      +||.|..|+    .|
T Consensus       447 ~C~C~~Gy~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Cs~~G~C~~-------G~C~C~~~~~~~~G~~G~~Ce~~~~~C  519 (687)
T 3k6s_B          447 ICRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-------GQCLCHTSDVPGKLIYGQYCECDTINC  519 (687)
T ss_dssp             SEEECSSEESTTSCEESSSCCCSGGGSTTSSSTTSCGGGSSEEEET-------TEEEECCCCSTTCCEESTTSCEESSCS
T ss_pred             EeEcCCCCcCCcccccCCcCCccccCCCCCCCCCCCcCCCCCEEeC-------CEEEcCCCCCCCCCccccccccccccc
Confidence            34599999999997             35432  245888888874       599999      999999995    44


Q ss_pred             CCCccccccCcCCCCCcCCcc--cccCCcccCCCCCCccCCCCceecCCCCcc-cCCCCCCC--CCCCCCceeec
Q psy826          145 NTGYFQSYKDEKTILCSKCHA--SCESGCSTGGPKGCTKCKSGWAADKDIGCY-DINECSDE--NICSGNQFCVN  214 (329)
Q Consensus       145 ~~g~y~~~~~~~~~~C~~C~~--~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~-d~~eC~~~--~~C~~~~~C~n  214 (329)
                      ...        ..   ..|..  .  ++|..   ..| .|.+||.|.... |. +++.|...  ..|..+..|..
T Consensus       520 ~~~--------~~---~~C~~~~~--G~C~~---g~C-~C~~G~~G~~Ce-c~~~~~~C~~~~g~~Cs~~G~C~~  576 (687)
T 3k6s_B          520 ERY--------NG---QVCGGPGR--GLCFC---GKC-RCHPGFEGSACQ-CERTTEGCLNPRRVECSGRGRCRC  576 (687)
T ss_dssp             CEE--------TT---EETSHHHH--EEEET---TEE-EECTTCCSTTSC-SCCSSCTTBCTTCSBTSSSCCBCS
T ss_pred             cCC--------CC---cCcCCCCC--CeEEC---CEE-EcCCCCcCCCCc-cCCCCCCCCCCCCCCCCCCCcCCC
Confidence            421        00   13443  2  34542   489 999999987643 21 34556542  35665556654

>1z6c_A Vitamin K-dependent protein S; EGF module, blood clotting; NMR {Homo sapiens}

Probab=98.23  E-value=5.1e-07  Score=66.95  Aligned_cols=74  Identities=30%  Similarity=0.679  Sum_probs=48.8

Q ss_pred             cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCC----CCCCCcCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCC
Q psy826          104 PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYT----GELCNECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKG  178 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~----g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~  178 (329)
                      +|...+.+| +++.|++   +.++|+|.|++||+    |..|.   +      +++...  .+|.    ++|. .+++|.
T Consensus         5 eC~~~~~~C-~~~~C~n---~~g~y~C~C~~G~~~~~~g~~C~---d------ideC~~--~~C~----~~C~n~~g~y~   65 (87)
T 1z6c_A            5 ECSLKPSIC-GTAVCKN---IPGDFECECPEGYRYNLKSKSCE---D------IDECSE--NMCA----QLCVNYPGGYT   65 (87)
T ss_dssp             SSSSSSSSB-TTSSCCC---BTTBCCCSSSTTCEEETTTTEEE---C------CCHHHH--SCCS----SEECCCSSSCC
T ss_pred             cccCCCCCC-CCCEeEC---CCCCEEEECCCCceECCCCCcCC---C------cCeeCC--CCCC----CEEEccCCCEE
Confidence            455544558 6789998   88999999999998    66662   1      222211  2344    3565 788999


Q ss_pred             CccC--CCCceecCC-CCcccC
Q psy826          179 CTKC--KSGWAADKD-IGCYDI  197 (329)
Q Consensus       179 C~~C--~~G~~~~~~-~~C~d~  197 (329)
                      | .|  .+||.+..+ ..|.+|
T Consensus        66 C-~C~g~~G~~~~~~~~~C~di   86 (87)
T 1z6c_A           66 C-YCDGKKGFKLAQDQKSCEVV   86 (87)
T ss_dssp             E-ECCSSSCCBCCTTSSSCBCC
T ss_pred             E-ECCCCcCCcccCCCCcceEC
Confidence            9 99  577776543 235554

>1emn_A Fibrillin; extracellular matrix, calcium-binding, glycoprotein, repeat, signal, multigene family, disease mutation, matrix protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 1emo_A

Probab=98.22  E-value=8.4e-07  Score=64.99  Aligned_cols=66  Identities=32%  Similarity=0.821  Sum_probs=48.3

Q ss_pred             cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCC--CCCCC---cCCCCccccccCcCCCCCcCCcccccCCcc-cCCCC
Q psy826          104 PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYT--GELCN---ECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPK  177 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~--g~~C~---~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~  177 (329)
                      +|.. .++|. ++.|++   +.++|+|.|++||+  |..|.   +|...             .+|..   ++|. ..++|
T Consensus         7 eC~~-~~~C~-~g~C~n---~~g~y~C~C~~Gy~~~g~~C~dideC~~~-------------~~C~~---~~C~n~~g~y   65 (82)
T 1emn_A            7 ECKE-PDVCK-HGQCIN---TDGSYRCECPFGYILAGNECVDTDECSVG-------------NPCGN---GTCKNVIGGF   65 (82)
T ss_dssp             SSSS-TTSCS-SSEECC---CSSCCCEECCTTEEEETTEEEECCGGGTC-------------CTTSS---SCEEECSSSE
T ss_pred             cCCC-CCCcC-CCEEEe---cCCCEEEECCCCeECCCCccCCcccccCC-------------CCCCC---CEeECCCCCE
Confidence            4543 46786 489998   88999999999997  87772   33311             24442   3676 77889


Q ss_pred             CCccCCCCceecCC
Q psy826          178 GCTKCKSGWAADKD  191 (329)
Q Consensus       178 ~C~~C~~G~~~~~~  191 (329)
                      .| .|++||.+...
T Consensus        66 ~C-~C~~G~~g~~~   78 (82)
T 1emn_A           66 EC-TCEEGFEPGPM   78 (82)
T ss_dssp             EE-CCSSSSCCCSS
T ss_pred             Ee-ECCCCeEeCCC
Confidence            99 99999998764

>2ygq_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: PCF NAG FUC SCR; 3.95A {Homo sapiens}

Probab=98.18  E-value=1.7e-06  Score=79.89  Aligned_cols=27  Identities=26%  Similarity=0.737  Sum_probs=23.0

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ++|.++|.|.+      .+.|.|.+||+|..|+
T Consensus       153 ~~C~~~G~C~~------~~~C~C~~G~~G~~C~  179 (324)
T 2ygq_A          153 GGCRNGGFCNE------RRICECPDGFHGPHCE  179 (324)
T ss_dssp             SCCCSSCEECT------TSCEECCTTEESSSSC
T ss_pred             CCCCCCCEECC------CCeEECCCCCcCCCCC
Confidence            56999999984      3889999999999884

>2w2n_E LDL receptor, low-density lipoprotein receptor; hydrolase-receptor complex, PCSK9, proprotein converta low-density lipoprotein receptor, EGF; 2.30A {Homo sapiens} PDB: 2w2q_E 2w2o_E 2w2p_E 2w2m_E 3gcw_E 3bps_E 3gcx_E 1hz8_A 1i0u_A 1hj7_A

Probab=98.15  E-value=4.5e-07  Score=69.99  Aligned_cols=79  Identities=22%  Similarity=0.421  Sum_probs=31.8

Q ss_pred             CCCCCCCCCCc--cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCC---CCCCcCCCCccccccCcCCCCCcCCcccc
Q psy826           93 CPVDHYGADCK--PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTG---ELCNECNTGYFQSYKDEKTILCSKCHASC  167 (329)
Q Consensus        93 C~~G~~G~~C~--~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g---~~C~~C~~g~y~~~~~~~~~~C~~C~~~C  167 (329)
                      ...||.|..|.  +|......|.  +.|++   +.++|.|.|++||+|   ..|+   +      +|+... -.+|.   
T Consensus        18 ~~~~~~~~~Cd~neC~~~~~~C~--~~C~n---~~g~y~C~C~~Gy~g~~g~~C~---d------ideC~~-~~~C~---   79 (107)
T 2w2n_E           18 TENLYFQGAMGTNECLDNNGGCS--YVCND---LKIGYECLCPDGFQLVAQRRCE---D------IDECQD-PDTCS---   79 (107)
T ss_dssp             --CCCCSCCBSCCGGGTGGGGCS--SEEEC---CSBSCEEECCTTCEEETTTEEE---C---------------------
T ss_pred             cCCCcCCCCCcCccCcCCCCCCC--CEeEe---CCCCeEEECCCCccccCCCccc---c------ccccCC-CCCcC---
Confidence            45778888885  5554334453  47888   788999999999997   5663   1      222211 02343   


Q ss_pred             cCCcc-cCCCCCCccCCCCceecCC
Q psy826          168 ESGCS-TGGPKGCTKCKSGWAADKD  191 (329)
Q Consensus       168 ~~~C~-~~~~~~C~~C~~G~~~~~~  191 (329)
                       ++|. .+++|.| .|++||.+..+
T Consensus        80 -~~C~n~~gsy~C-~C~~Gy~~~~d  102 (107)
T 2w2n_E           80 -QLCVNLEGGYKC-QCEEGFQLDPH  102 (107)
T ss_dssp             -------------------------
T ss_pred             -CeeecCCCCEEE-ECCCCceECCC
Confidence             4666 7889999 99999998763

>1klo_A Laminin; glycoprotein; 2.10A {Mus musculus} SCOP: g.3.11.2 g.3.11.2 g.3.11.2 PDB: 1npe_B 1tle_A

Probab=98.14  E-value=2e-06  Score=71.43  Aligned_cols=92  Identities=25%  Similarity=0.645  Sum_probs=58.6

Q ss_pred             CCCCCCCCCCccCCCCC--CC--------------CCCC------CcccCCCCCCCCceee-cCCCCCCCCCCcCCCCcc
Q psy826           93 CPVDHYGADCKPCLGFP--NV--------------CFGN------GKCKGNGTRKGNGQCV-CNKEYTGELCNECNTGYF  149 (329)
Q Consensus        93 C~~G~~G~~C~~C~~~~--~~--------------C~~~------~~C~~~~~~~gs~~C~-C~~G~~g~~C~~C~~g~y  149 (329)
                      |++||.|..|+.|+++.  .+              |.++      +.|.     ..+++|+ |+++|+|..|+.|++|||
T Consensus        23 C~~g~~G~~Ce~C~~g~~g~~~~~~~~~~~C~~C~C~~~~~~~~~~~C~-----~~tG~C~~C~~g~~G~~Ce~C~~Gy~   97 (162)
T 1klo_A           23 CPTGTAGKRCELCDDGYFGDPLGSNGPVRLCRPCQCNDNIDPNAVGNCN-----RLTGECLKCIYNTAGFYCDRCKEGFF   97 (162)
T ss_dssp             CCTTEESTTSCEECTTEEEETTCTTSSCEEEEECCSTTCBCTTCSCCBC-----TTTCCBCCBCTTEETTTTCEECTTEE
T ss_pred             CCCCCcCCCCcCCCCCCcCCcccccCCCCCCeeCcCCCCCCcccCCccc-----CCCCcccCCCCCCcCCCcCcCchhhc
Confidence            88888888888776521  11              3333      2443     3468895 999999999999999999


Q ss_pred             ccccC-cCCCCCcCC--ccc--cc--CCcccCCCCCCccCCCCceecCC
Q psy826          150 QSYKD-EKTILCSKC--HAS--CE--SGCSTGGPKGCTKCKSGWAADKD  191 (329)
Q Consensus       150 ~~~~~-~~~~~C~~C--~~~--C~--~~C~~~~~~~C~~C~~G~~~~~~  191 (329)
                      +.... .....|.+|  +..  -.  ..|. +...+| .|++||.|...
T Consensus        98 g~~~~~~~~~~C~~C~C~~~Gs~~~~~~Cd-~~tG~C-~C~~g~~G~~C  144 (162)
T 1klo_A           98 GNPLAPNPADKCKACACNPYGTVQQQSSCN-PVTGQC-QCLPHVSGRDC  144 (162)
T ss_dssp             ECTTCSSGGGSEEECCCCTTTBGGGCCCCC-TTTCCC-CBCTTEESTTC
T ss_pred             CCccccCCCCCCeeccCCCCCccCCCCCCC-CCCCEe-ECCCCCcCCCC
Confidence            85443 112335543  221  00  1454 234689 99999998763

>1x7a_L Coagulation factor IX, light chain; inhibition, blood clotting,hydrolase; HET: 187; 2.90A {Sus scrofa} SCOP: g.3.11.1 g.3.11.1 PDB: 1pfx_L*

Probab=98.13  E-value=1.4e-06  Score=70.99  Aligned_cols=71  Identities=24%  Similarity=0.596  Sum_probs=56.7

Q ss_pred             CCcccccCCcc-cCCCCCCccCCCCceecCCCCcccCCCCCCC-CCCCCCcee-ecCCCCcccCCCcCCCCCCcCCcccc
Q psy826          162 KCHASCESGCS-TGGPKGCTKCKSGWAADKDIGCYDINECSDE-NICSGNQFC-VNTEGSYRCMQCDPSCNGCHGDGPDM  238 (329)
Q Consensus       162 ~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~-~~C~~~~~C-~n~~gs~~C~~C~~~C~~C~g~~~~~  238 (329)
                      +|..+  ++|. ..++|.| .|++||.|   ..|.++++|... ..|..  .| +++.|+|.|.                
T Consensus        55 pC~n~--g~C~~~~~~y~C-~C~~G~~G---~~C~~~deC~~~~~~C~~--~C~~n~~g~y~C~----------------  110 (146)
T 1x7a_L           55 PCLNG--GLCKDDINSYEC-WCQVGFEG---KNCELDATCNIKNGRCKQ--FCKTGADSKVLCS----------------  110 (146)
T ss_dssp             SSCTT--CEEEECSSCEEE-ECCSSEES---TTTCEECCTTSGGGSCSS--BCCCCSSSCCCCB----------------
T ss_pred             CCCCC--CEeECCCCCEEE-ecCCCCcC---CcCCCCccccCCCCCCcC--CCCCCCCCCEEeE----------------
Confidence            56554  5776 6788999 99999986   458888999874 56754  89 9999999999                


Q ss_pred             cccCccccccc--CCcccccCcC
Q psy826          239 CEACAEGYKLQ--QNICINTQAK  259 (329)
Q Consensus       239 C~~C~~Gy~~~--~~~C~~~~~~  259 (329)
                         |++||.+.  +..|.++++.
T Consensus       111 ---C~~Gy~l~~dG~~C~~~~~~  130 (146)
T 1x7a_L          111 ---CTTGYRLAPDQKSCKPAVPF  130 (146)
T ss_dssp             ---CCTTEEECTTSSSEEECSSS
T ss_pred             ---cCCCcEeCCCCCcCCCCCCC
Confidence               99999954  5689887654

>1tpg_A T-plasminogen activator F1-G; plasminogen activation; NMR {Homo sapiens} SCOP: g.3.11.1 g.27.1.1 PDB: 1tpm_A 1tpn_A

Probab=98.08  E-value=2.2e-06  Score=64.05  Aligned_cols=79  Identities=15%  Similarity=0.342  Sum_probs=51.0

Q ss_pred             eeecccccCcCCCCCCCCCCccCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcCCCCCcC
Q psy826           83 WLCINKLKRCCPVDHYGADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSK  162 (329)
Q Consensus        83 ~~C~~~~~~~C~~G~~G~~C~~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~  162 (329)
                      |.|.      |++||.|..|+     .+.|. ...|.+   ..++|+|.|++||+  .|+. .+      .+....  .+
T Consensus         2 y~C~------C~~g~~g~~c~-----~~~c~-~~pC~n---~~~~y~C~C~~G~~--~C~~-~~------~~~C~~--~p   55 (91)
T 1tpg_A            2 YQVI------CRDEKTQMIYQ-----QHQSW-LRPVLR---SNRVEYCWCNSGRA--QCHS-VP------VKSCSE--PR   55 (91)
T ss_dssp             CCCC------CBCSSSCCBCC-----SSCEE-EEECSS---SSCEEEEECSSSCC--BCCE-EC------EEECSS--CC
T ss_pred             eeeE------CCCCCcCCeEC-----CCccc-CCcccc---CCCCcEeECCCCCc--cccc-Cc------CCcccC--CC
Confidence            5566      99999999885     12232 123555   56789999999997  5530 00      111111  35


Q ss_pred             CcccccCCcc-cC--CCCCCccCCCCceecC
Q psy826          163 CHASCESGCS-TG--GPKGCTKCKSGWAADK  190 (329)
Q Consensus       163 C~~~C~~~C~-~~--~~~~C~~C~~G~~~~~  190 (329)
                      |.++  ++|. ..  +++.| .|++||.|..
T Consensus        56 C~ng--g~C~~~~~~~~~~C-~C~~G~~G~~   83 (91)
T 1tpg_A           56 CFNG--GTCQQALYFSDFVC-QCPEGFAGKS   83 (91)
T ss_dssp             SCTT--CEEEEESSSSCEEE-ECCTTCBSSS
T ss_pred             CCCC--CEeecCCCCCCeEe-ECCCCCcCCc
Confidence            6655  5676 44  78999 9999998754

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=98.04  E-value=5.1e-06  Score=76.25  Aligned_cols=75  Identities=25%  Similarity=0.666  Sum_probs=55.9

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC----cCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN----ECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKCK  183 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~----~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~  183 (329)
                      .++|.++++|.+   ..++|.|.|.+||+|..|+    +|..+           .-.+|.+    .|. ..+++.| .|+
T Consensus        10 ~~pC~~~g~C~~---~~~~~~C~C~~g~~g~~C~~~~~eC~~~-----------~~~~C~~----~C~~~~g~~~C-~C~   70 (317)
T 3h5c_B           10 SQPCLHNGSCQD---SIWGYTCTCSPGYEGSNCELAKNECHPE-----------RTDGCQH----FCLPGQESYTC-SCA   70 (317)
T ss_dssp             SCCCTTTCCCCC---CSSSCCCCCSSSCCSSSSCCCSSSCCTT-----------CTTSCSS----EEECCSSSCEE-ECC
T ss_pred             CCCCCCCCEeEC---CCCCeEEECCCCCcCCccccCcccCCCC-----------CCCCCcC----ccccCCCeeEE-ecc
Confidence            367999999998   7788999999999999884    33221           0123443    455 6788999 999


Q ss_pred             CCceecCC-CCcccCCCCCC
Q psy826          184 SGWAADKD-IGCYDINECSD  202 (329)
Q Consensus       184 ~G~~~~~~-~~C~d~~eC~~  202 (329)
                      +||.+..+ ..|.++++|..
T Consensus        71 ~g~~~~~~~~~C~~~~~c~c   90 (317)
T 3h5c_B           71 QGYRLGEDHKQCVPHDQCAC   90 (317)
T ss_dssp             TTEECCTTSSCCEECSSCCC
T ss_pred             cccccccccccccccccccc
Confidence            99999764 35998888753

>1lmj_A Fibrillin 1; EGF, calcium, microfibril, neonatal, marfan syndrome, connective tissue, extracellular matrix, structural protein; NMR {Homo sapiens} SCOP: g.3.11.1 g.3.11.1

Probab=98.02  E-value=7e-07  Score=66.01  Aligned_cols=71  Identities=27%  Similarity=0.587  Sum_probs=48.2

Q ss_pred             cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCC-----CCCCCcCCCCccccccCcCCCCCcCCcccccCCcc-cCCCC
Q psy826          104 PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYT-----GELCNECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPK  177 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~-----g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~  177 (329)
                      +|...+++|. ++.|++   +.++|+|.|++||+     |..|.   +      +|+....-..|+.   ++|. .+++|
T Consensus         5 eC~~~~~~C~-~g~C~n---~~g~y~C~C~~Gy~~~~~~g~~C~---d------ideC~~~~~~C~~---~~C~n~~g~y   68 (86)
T 1lmj_A            5 ECRISPDLCG-RGQCVN---TPGDFECKCDEGYESGFMMMKNCM---D------IDECQRDPLLCRG---GVCHNTEGSY   68 (86)
T ss_dssp             TTTTCSSTTT-TSCEEE---ETTEEEECCCSSEEECTTTSSSEE---E------CCHHHHCSSTTTT---SEEEEETTEE
T ss_pred             cccCCCCCCC-CCEEEC---CCCCEEeeCCCCcCccCCCCCccC---C------cccccCCCCcCCC---CEeEcCCCCE
Confidence            5655556785 469998   88999999999998     55662   1      2222111112432   3676 78899


Q ss_pred             CCccCCCCceecCC
Q psy826          178 GCTKCKSGWAADKD  191 (329)
Q Consensus       178 ~C~~C~~G~~~~~~  191 (329)
                      .| .|++||.+..+
T Consensus        69 ~C-~C~~G~~~~~~   81 (86)
T 1lmj_A           69 RC-ECPPGHQLSPN   81 (86)
T ss_dssp             EE-ESCTTSCCCSS
T ss_pred             EE-ECcCCcccCCC
Confidence            99 99999998764

>1aut_L Activated protein C; serine proteinase, plasma calcium binding, glycoprotein, HYD hydrolase inhibitor complex, blood clotting; HET: 0G6; 2.80A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 PDB: 3f6u_L*

Probab=97.98  E-value=4e-06  Score=65.34  Aligned_cols=65  Identities=34%  Similarity=0.783  Sum_probs=49.9

Q ss_pred             CCcc-cCCCCCCccCCCCceecCCCCccc---CCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCc
Q psy826          169 SGCS-TGGPKGCTKCKSGWAADKDIGCYD---INECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACA  243 (329)
Q Consensus       169 ~~C~-~~~~~~C~~C~~G~~~~~~~~C~d---~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~  243 (329)
                      ++|. ..++|.| .|++||.|..   |.+   +++|... ..|.  ..|+|+.++|+|.                   |+
T Consensus        26 g~C~~~~~~y~C-~C~~G~~G~~---C~~~~~~~~C~~~~~~C~--~~C~n~~g~y~C~-------------------C~   80 (114)
T 1aut_L           26 GTCIDGIGSFSC-DCRSGWEGRF---CQREVSFLNCSLDNGGCT--HYCLEEVGWRRCS-------------------CA   80 (114)
T ss_dssp             EEECCCSSCCCE-EECTTEESTT---SCEECCSSSSSSGGGGCS--SEEEECSSSEEEE-------------------CC
T ss_pred             CCCCCCCCCcEe-eCCCCCcCCC---cCcCCcCCcCcCCCCCCC--CEeECCCCCEEeE-------------------CC
Confidence            4676 6788999 9999998865   654   3468753 4564  3899999999999                   99


Q ss_pred             cccccc--CCcccccCc
Q psy826          244 EGYKLQ--QNICINTQA  258 (329)
Q Consensus       244 ~Gy~~~--~~~C~~~~~  258 (329)
                      +||.+.  +..|.+..+
T Consensus        81 ~G~~~~~~g~~C~~~~~   97 (114)
T 1aut_L           81 PGYKLGDDLLQCHPAVK   97 (114)
T ss_dssp             TTEEECTTSSCEEECSS
T ss_pred             CCeeECCCCCccCcCcc
Confidence            999964  567887554

>3fcs_B Integrin beta-3; beta propeller, rossmann fold, EGF domain, cell adhesion, DI mutation, glycoprotein, HOST-virus interaction, M phosphoprotein; HET: NAG MAN; 2.55A {Homo sapiens} PDB: 4g1e_B* 3ije_B* 4g1m_B* 1jv2_B* 1l5g_B* 1m1x_B* 1u8c_B*

Probab=97.89  E-value=9.6e-06  Score=81.82  Aligned_cols=129  Identities=22%  Similarity=0.538  Sum_probs=72.3

Q ss_pred             CCCCCCCCcccCCCCCCCCce---eecCCCCCCCCCCcCCCCccccccCcCCCCCcC------CcccccCCcccCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQ---CVCNKEYTGELCNECNTGYFQSYKDEKTILCSK------CHASCESGCSTGGPKGC  179 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~---C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~------C~~~C~~~C~~~~~~~C  179 (329)
                      .++|.+++.|.+   ..|++.   |.|.+||.|..|+ |+.+++..   .....|..      |.+.  ++|.   .+.|
T Consensus       439 ~~pc~n~~~C~~---g~G~~~~G~C~C~~Gy~G~~Ce-~~~~~~~~---~~~~~C~~~~~~~~Cs~~--G~C~---~g~C  506 (690)
T 3fcs_B          439 AQAEPNSHRCNN---GNGTFECGVCRCGPGWLGSQCE-CSEEDYRP---SQQDECSPREGQPVCSQR--GECL---CGQC  506 (690)
T ss_dssp             TTCCTTCTTTTT---TSEEEETTEEEECTTCCSSSSC-CSCC---------CCCCSSSSSSCGGGGS--EEEC---SSSE
T ss_pred             CCCCCCCCcccC---CCCeEeCCceEeCCCccCCcee-eccCccCC---ccCCcCCCCCCCCCCCCC--CEEE---CCee
Confidence            356888889984   345555   9999999999993 55544321   11122432      4433  4554   2689


Q ss_pred             ccCC----CCceecCCCCcccCCCCCCC--CCCCCCceeec-----CCC--CcccC--CCcCCCC-----CCcCCc---c
Q psy826          180 TKCK----SGWAADKDIGCYDINECSDE--NICSGNQFCVN-----TEG--SYRCM--QCDPSCN-----GCHGDG---P  236 (329)
Q Consensus       180 ~~C~----~G~~~~~~~~C~d~~eC~~~--~~C~~~~~C~n-----~~g--s~~C~--~C~~~C~-----~C~g~~---~  236 (329)
                       .|.    +||.|....  .++++|...  ..|..+..|.+     .+|  +..|.  .....|.     .|.+.+   .
T Consensus       507 -~C~~~~~~Gy~G~~Ce--~~~~~C~~~~~~~C~~~G~C~~g~C~C~~Gy~G~~CeC~~~~~~C~~~~g~~C~~~G~C~~  583 (690)
T 3fcs_B          507 -VCHSSDFGKITGKYCE--CDDFSCVRYKGEMCSGHGQCSCGDCLCDSDWTGYYCNCTTRTDTCMSSNGLLCSGRGKCEC  583 (690)
T ss_dssp             -EECCCSSCCCBSTTSC--BCSSCCCBSSSSBGGGSEEEETTEEEECTTEESSSSCEECCCTTTBCTTSSBTSSSCEEET
T ss_pred             -EeecCCCCCeeCCCcC--cccCcCcCCCCCCCCCCCEecCCeeECcCCCcCCCCccCCCCCcccCCCCCCCCCCCEEeC
Confidence             999    999886532  255667642  35766666654     111  11222  1112232     243321   2


Q ss_pred             cccccC-cccccccCCcccc
Q psy826          237 DMCEAC-AEGYKLQQNICIN  255 (329)
Q Consensus       237 ~~C~~C-~~Gy~~~~~~C~~  255 (329)
                      ..|. | .+||.|.  .|..
T Consensus       584 g~C~-C~~~Gy~G~--~Ce~  600 (690)
T 3fcs_B          584 GSCV-CIQPGSYGD--TCEK  600 (690)
T ss_dssp             TEEE-CCSTTCBST--TSCB
T ss_pred             CEEE-CCCCCccCC--CcCc
Confidence            4787 9 9999876  7865

>3h5c_B Vitamin K-dependent protein Z; protein Z-protein Z inhibitor complex, blood coagulation, CL PAIR of basic residues, disulfide bond, EGF-like domain; HET: NAG BGC; 3.26A {Homo sapiens}

Probab=97.88  E-value=2.3e-05  Score=71.76  Aligned_cols=72  Identities=31%  Similarity=0.781  Sum_probs=57.5

Q ss_pred             CCcccccCCcc-cCCCCCCccCCCCceecCCCCcc-cCCCCCCC--CCCCCCceeecCCCCcccCCCcCCCCCCcCCccc
Q psy826          162 KCHASCESGCS-TGGPKGCTKCKSGWAADKDIGCY-DINECSDE--NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPD  237 (329)
Q Consensus       162 ~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~-d~~eC~~~--~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~  237 (329)
                      +|.++  ++|. ..+++.| .|++||.|.   .|. |++||...  .+|.+  .|+|+.++|.|.               
T Consensus        12 pC~~~--g~C~~~~~~~~C-~C~~g~~g~---~C~~~~~eC~~~~~~~C~~--~C~~~~g~~~C~---------------   68 (317)
T 3h5c_B           12 PCLHN--GSCQDSIWGYTC-TCSPGYEGS---NCELAKNECHPERTDGCQH--FCLPGQESYTCS---------------   68 (317)
T ss_dssp             CCTTT--CCCCCCSSSCCC-CCSSSCCSS---SSCCCSSSCCTTCTTSCSS--EEECCSSSCEEE---------------
T ss_pred             CCCCC--CEeECCCCCeEE-ECCCCCcCC---ccccCcccCCCCCCCCCcC--ccccCCCeeEEe---------------
Confidence            45554  4676 6678999 999999864   577 99999862  68865  999999999999               


Q ss_pred             ccccCccccccc--CCcccccCcCC
Q psy826          238 MCEACAEGYKLQ--QNICINTQAKS  260 (329)
Q Consensus       238 ~C~~C~~Gy~~~--~~~C~~~~~~~  260 (329)
                          |++||.+.  ...|.+.+++.
T Consensus        69 ----C~~g~~~~~~~~~C~~~~~c~   89 (317)
T 3h5c_B           69 ----CAQGYRLGEDHKQCVPHDQCA   89 (317)
T ss_dssp             ----CCTTEECCTTSSCCEECSSCC
T ss_pred             ----ccccccccccccccccccccc
Confidence                99999985  45798877654

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=97.82  E-value=1.4e-07  Score=84.01  Aligned_cols=29  Identities=10%  Similarity=-0.053  Sum_probs=19.9

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELC  141 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C  141 (329)
                      .||.++++|++   ...+|+|.|++||+|..|
T Consensus       105 ~pC~ngG~C~~---~~~sy~C~C~~Gf~G~~C  133 (267)
T 4fbr_A          105 IKSNDGGKTLT---GTTTYNGEGPIGFKSEVT  133 (267)
T ss_dssp             EECSSTTSEEE---EEEEETTSCCEEEEEEEC
T ss_pred             CCCCCCCEEec---CCccEEeeCCCCccccCC
Confidence            45666666765   566777777777777666

>1nfu_B Coagulation factor XA, light chain; hydrolase; HET: RRP; 2.05A {Homo sapiens} SCOP: g.3.11.1 PDB: 2h9e_L*

Probab=97.81  E-value=3.6e-06  Score=71.89  Aligned_cols=69  Identities=32%  Similarity=0.732  Sum_probs=31.8

Q ss_pred             CCcccccCCcc-cCCCCCCccCCCCceecCCCCccc-C-CCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCccc
Q psy826          162 KCHASCESGCS-TGGPKGCTKCKSGWAADKDIGCYD-I-NECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPD  237 (329)
Q Consensus       162 ~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~d-~-~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~  237 (329)
                      +|..+  ++|. ..++|.| .|++||.|.   .|.+ + ++|... ..|..  .|+++.|+|.|.               
T Consensus        49 pC~ng--g~C~n~~g~y~C-~C~~Gf~G~---~Ce~~i~deC~~~~~~C~~--~C~n~~gsy~C~---------------  105 (195)
T 1nfu_B           49 PCQNQ--GKCKDGLGEYTC-TCLEGFEGK---NCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCS---------------  105 (195)
T ss_dssp             --------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEE---------------
T ss_pred             CCCCC--CEeECCCCCeeE-eCCCCceec---cccccccccccCCCCCCCC--EeECCCCCeEEE---------------
Confidence            56554  5776 6788999 999999864   4776 5 889874 56754  999999999999               


Q ss_pred             ccccCccccccc--CCcccccC
Q psy826          238 MCEACAEGYKLQ--QNICINTQ  257 (329)
Q Consensus       238 ~C~~C~~Gy~~~--~~~C~~~~  257 (329)
                          |++||.+.  +..|.++.
T Consensus       106 ----C~~Gy~l~~dG~~C~~~~  123 (195)
T 1nfu_B          106 ----CARGYTLADNGKACIPTG  123 (195)
T ss_dssp             ----CCTTEEECTTSSCEEESS
T ss_pred             ----CCCCceeCCCCCccccCC
Confidence                99999954  66898765

>3k6s_B Integrin beta-2; cell receptor, adhesion molecule, cell adhesion, pyrrolidone carboxylic acid; HET: NAG MAN; 3.50A {Homo sapiens} PDB: 3k71_B* 3k72_B*

Probab=97.78  E-value=1.9e-05  Score=79.52  Aligned_cols=99  Identities=26%  Similarity=0.614  Sum_probs=62.4

Q ss_pred             cCcCC------CCCCCCCCc----cCCC-CCCCCCC--CCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcC
Q psy826           90 KRCCP------VDHYGADCK----PCLG-FPNVCFG--NGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEK  156 (329)
Q Consensus        90 ~~~C~------~G~~G~~C~----~C~~-~~~~C~~--~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~  156 (329)
                      .+.|+      +||+|..|+    .|+. ...+|.+  +|.|..       ++|.|.+||+|..|+ |+....     ..
T Consensus       494 ~C~C~~~~~~~~G~~G~~Ce~~~~~C~~~~~~~C~~~~~G~C~~-------g~C~C~~G~~G~~Ce-c~~~~~-----~C  560 (687)
T 3k6s_B          494 QCLCHTSDVPGKLIYGQYCECDTINCERYNGQVCGGPGRGLCFC-------GKCRCHPGFEGSACQ-CERTTE-----GC  560 (687)
T ss_dssp             EEEECCCCSTTCCEESTTSCEESSCSCEETTEETSHHHHEEEET-------TEEEECTTCCSTTSC-SCCSSC-----TT
T ss_pred             EEEcCCCCCCCCCccccccccccccccCCCCcCcCCCCCCeEEC-------CEEEcCCCCcCCCCc-cCCCCC-----CC
Confidence            45599      999999997    5764 2356887  889984       589999999999996 443211     00


Q ss_pred             CC-CCcCCcccccCCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCcee
Q psy826          157 TI-LCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFC  212 (329)
Q Consensus       157 ~~-~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C  212 (329)
                      .. .-.+|...  ++|..   ..| .|.+||.|.....|   ..|..  +|.++..|
T Consensus       561 ~~~~g~~Cs~~--G~C~~---g~C-~C~~Gy~G~~Ce~c---~~C~~--~C~~~g~C  606 (687)
T 3k6s_B          561 LNPRRVECSGR--GRCRC---NVC-ECHSGYQLPLCQEC---PGCPS--PCGKYISC  606 (687)
T ss_dssp             BCTTCSBTSSS--CCBCS---SCB-CCSTTCCTTTTCCC---TTSCC--CCTTTHHH
T ss_pred             CCCCCCCCCCC--CcCCC---CEE-ECCCCCcCCCCCCC---CCCCc--ccCCCCCC
Confidence            00 00134433  45543   579 99999998764433   23432  55544443

>2vh0_B Activated factor XA light chain; serine protease, EGF-like domain, blood coagulation, polymorphism, glycoprotein, hydroxylation; HET: GSI; 1.7A {Homo sapiens} PDB: 1ezq_B* 1f0s_B* 1ksn_B* 1f0r_B* 1lpk_A* 1lpz_A* 1lqd_A* 1nfw_B* 1nfx_B* 1nfy_B* 2boh_A* 2cji_B* 1lpg_A* 2j34_B* 2j38_B* 2j2u_B* 2j94_B* 2j95_B* 2uwl_B* 2j4i_B* ...

Probab=97.77  E-value=4.8e-06  Score=66.84  Aligned_cols=70  Identities=31%  Similarity=0.723  Sum_probs=31.9

Q ss_pred             CCcccccCCcc-cCCCCCCccCCCCceecCCCCccc-C-CCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCccc
Q psy826          162 KCHASCESGCS-TGGPKGCTKCKSGWAADKDIGCYD-I-NECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPD  237 (329)
Q Consensus       162 ~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~d-~-~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~  237 (329)
                      +|.++  ++|. ..++|.| .|++||.|.   .|.+ + ++|... ..|.+  .|+++.++|.|.               
T Consensus        49 pC~n~--g~C~~~~~~y~C-~C~~G~~G~---~C~~~i~d~C~~~~~~C~~--~C~~~~g~y~C~---------------  105 (134)
T 2vh0_B           49 PCQNQ--GKCKDGLGEYTC-TCLEGFEGK---NCELFTRKLCSLDNGDCDQ--FCHEEQNSVVCS---------------  105 (134)
T ss_dssp             --------------------------------------CCGGGTGGGGCSS--EEEEETTEEEEE---------------
T ss_pred             CCCCc--CCcccCCCCEEe-eCCCCccCC---ccccCCCCccccCCCCCCC--EeECCCCCEEEE---------------
Confidence            45554  4676 6778999 999999864   4776 6 789864 56754  899999999999               


Q ss_pred             ccccCccccccc--CCcccccCc
Q psy826          238 MCEACAEGYKLQ--QNICINTQA  258 (329)
Q Consensus       238 ~C~~C~~Gy~~~--~~~C~~~~~  258 (329)
                          |++||.+.  +..|.++.+
T Consensus       106 ----C~~Gy~l~~~g~~C~~~~~  124 (134)
T 2vh0_B          106 ----CARGYTLADNGKACIPTGP  124 (134)
T ss_dssp             ----CCTTEEECTTSSCEEESSS
T ss_pred             ----CCCCcEECCCCCccCcCCC
Confidence                99999954  567887654

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=97.72  E-value=2.5e-05  Score=55.44  Aligned_cols=60  Identities=28%  Similarity=0.696  Sum_probs=41.3

Q ss_pred             ccCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCC-CCcC--------CcccccccCcccccccCC-cccc
Q psy826          195 YDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCN-GCHG--------DGPDMCEACAEGYKLQQN-ICIN  255 (329)
Q Consensus       195 ~d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~-~C~g--------~~~~~C~~C~~Gy~~~~~-~C~~  255 (329)
                      +|||||... +.|..++.|+|++|+|+|..+..+.. ...+        ++.. +..|++||.+.+. +|+|
T Consensus         1 ~DidEC~~~~~~C~~~~~C~Nt~Gsy~C~~~~~g~~~~~~~~~~~~~~~~~~~-~~~C~~Gy~~~~~~~C~D   71 (71)
T 2kl7_A            1 SDVNECLTIPEACKGEMKCINHYGGYLCLPRSAAVINDLHGEGPPPPVPPAQH-PNPCPPGYEPDDQDSCVD   71 (71)
T ss_dssp             CCSCCTTCCCCSCTTEEEEEETTCCEEEEETTSCCCSCCSCSSCCCSSCSCSS-CCCSCTTEEEECCCCSCC
T ss_pred             CccccccCCCCCCCCCCEeECCCCCeEecccCCcccccccCCccccccccCcc-ccCCCCCeeeCCCCcccC
Confidence            378999875 68988889999999999996655431 1111        1222 3359999988754 6764

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.69  E-value=1.9e-05  Score=77.70  Aligned_cols=76  Identities=21%  Similarity=0.506  Sum_probs=22.9

Q ss_pred             CCCCCCcccCCC-CCCCCceeecCCCCCCCCCCcCCCCccccccCcCCCCCcCC--ccc--ccCCcccCCCCCCccCCCC
Q psy826          111 VCFGNGKCKGNG-TRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKC--HAS--CESGCSTGGPKGCTKCKSG  185 (329)
Q Consensus       111 ~C~~~~~C~~~~-~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~C--~~~--C~~~C~~~~~~~C~~C~~G  185 (329)
                      +|.++++|.+.. -...++.|.|++||.|..|+.|.+|||+...  ....|.+|  +..  |...|. ...++| .|++|
T Consensus       442 ~C~~~gtc~~~~~Cd~~tg~C~C~~g~~G~~Ce~C~~G~~g~~~--~~~~C~~C~C~~~gs~~~~C~-~~tG~C-~C~~G  517 (525)
T 4aqs_A          442 ACNPLGTIPGGNPCDSETGYCYCKRLVTGQRCDQCLPQHWGLSN--DLDGCRPCDCDLGGALNNSCS-EDSGQC-SCLPH  517 (525)
T ss_dssp             CCCTTTBCCSSCCBCTTTCCBCBCTTCCSTTTCC----------------------------------------------
T ss_pred             CCCCCceecCCCcccCCCCEEECCCCCcCCCcccCCCCccCCCC--CCCCCcCCCCCCCCccCCccC-CCCCee-ECCCC
Confidence            355555555321 0134678999999999999999999997432  22234443  322  222343 233589 99999


Q ss_pred             ceecC
Q psy826          186 WAADK  190 (329)
Q Consensus       186 ~~~~~  190 (329)
                      |.|..
T Consensus       518 ~~G~~  522 (525)
T 4aqs_A          518 MIGRQ  522 (525)
T ss_dssp             -----
T ss_pred             CcCCC
Confidence            99864

>2w86_A Fibrillin-1, fibrillin1; phosphoprotein, EGF-like domain, disease mutation, craniosynostosis, extracellular matrix, fibrillin calcium cbegf hybrid; 1.80A {Homo sapiens}

Probab=97.67  E-value=1.1e-06  Score=71.55  Aligned_cols=51  Identities=31%  Similarity=0.656  Sum_probs=33.1

Q ss_pred             ceeecCCCCC---CCCCCcCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccCCCCceecCC
Q psy826          128 GQCVCNKEYT---GELCNECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWAADKD  191 (329)
Q Consensus       128 ~~C~C~~G~~---g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~  191 (329)
                      +.|.|++||+   |..|+   +      +|+....-.+|.+   ++|. .+++|.| .|++||.+..+
T Consensus        88 ~~C~C~~Gy~~~~g~~C~---d------ideC~~~~~~C~~---g~C~n~~g~y~C-~C~~Gy~g~~~  142 (147)
T 2w86_A           88 VDPICGKGYSRIKGTQCE---D------IDECEVFPGVCKN---GLCVNTRGSFKC-QCPSGMTLDAT  142 (147)
T ss_dssp             CCTTTCTTEEEEETTEEE---E------CCHHHHSTTCSSS---SEEEEETTEEEE-ECCTTCCBCTT
T ss_pred             CcccCCCccccCCCCccC---c------cccccCCCCCCCC---CEEECCCCCEEe-eCCCCCccCCC
Confidence            6778999995   77773   1      2222111123443   2566 7889999 99999999864

>1dx5_I Thrombomodulin; serine proteinase, EGF-like domains, anticoagulant complex, antifibrinolytic complex, hydrolase-hydrolase inhibitor COM; HET: AR7 NDG; 2.30A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.3.11.1 PDB: 3gis_X 1dqb_A* 1zaq_A 1adx_A 2adx_A

Probab=97.65  E-value=8e-06  Score=63.98  Aligned_cols=66  Identities=24%  Similarity=0.542  Sum_probs=49.0

Q ss_pred             CCcc-c-CCCCCCccCCCCceecCCCCcccCCCCCC---CCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCc
Q psy826          169 SGCS-T-GGPKGCTKCKSGWAADKDIGCYDINECSD---ENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACA  243 (329)
Q Consensus       169 ~~C~-~-~~~~~C~~C~~G~~~~~~~~C~d~~eC~~---~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~  243 (329)
                      ++|. . .++|.| .|++||.+...    ++++|..   ..+|.  +.|++ .++|+|.                   |+
T Consensus        14 ~~C~~~~~g~y~C-~C~~Gy~g~~~----~~~~C~~~C~~~~C~--~~C~~-~~~y~C~-------------------C~   66 (118)
T 1dx5_I           14 YQCQPLDQTSYLC-VCAEGFAPIPH----EPHRCQMFCNQTACP--ADCDP-NTQASCE-------------------CP   66 (118)
T ss_dssp             SEEEECSSSCEEE-ECCTTEEEETT----EEEEEEECCCSSEEE--CEECT-TSTTCEE-------------------CC
T ss_pred             CCCCCCCCCCEEe-ECCCCccccCC----CCCccccccCCCCCC--CcccC-CCCeEeE-------------------CC
Confidence            3565 5 788999 99999999852    3444443   13443  57887 5889998                   99


Q ss_pred             cccccc-CCcccccCcCCC
Q psy826          244 EGYKLQ-QNICINTQAKSQ  261 (329)
Q Consensus       244 ~Gy~~~-~~~C~~~~~~~~  261 (329)
                      +||.+. +..|++++++..
T Consensus        67 ~Gy~~~~g~~C~dideC~~   85 (118)
T 1dx5_I           67 EGYILDDGFICTDIDECEN   85 (118)
T ss_dssp             TTEEEETTTEEEECCHHHH
T ss_pred             CCccCCCCCccccccccCC
Confidence            999977 678999988865

>4aqs_A Laminin subunit beta-1; cell adhesion; HET: NAG BMA MAN FUL; 3.11A {Mus musculus}

Probab=97.65  E-value=4.8e-05  Score=74.76  Aligned_cols=66  Identities=24%  Similarity=0.601  Sum_probs=41.7

Q ss_pred             CCceeecCCCCCCCCCCcCCCCccccccCcCCCCCcCC--ccc--cc--CCcccCCCCCCccCCCCceecCCCCc
Q psy826          126 GNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKC--HAS--CE--SGCSTGGPKGCTKCKSGWAADKDIGC  194 (329)
Q Consensus       126 gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~C--~~~--C~--~~C~~~~~~~C~~C~~G~~~~~~~~C  194 (329)
                      ..+.|.|.++|.|..|+.|.+|||+.... ....|.+|  +..  |.  ..|. ...+.| .|++||.|.....|
T Consensus       405 ~~~~C~C~~g~~G~~C~~C~~Gy~G~~c~-~~~~C~~C~C~~~gtc~~~~~Cd-~~tg~C-~C~~g~~G~~Ce~C  476 (525)
T 4aqs_A          405 IAGQCRCKLHVEGERCDVCKEGFYDLSAE-DPYGCKSCACNPLGTIPGGNPCD-SETGYC-YCKRLVTGQRCDQC  476 (525)
T ss_dssp             CSSCCCBCTTEETTTTCEECTTEECCCTT-STTSSEECCCCTTTBCCSSCCBC-TTTCCB-CBCTTCCSTTTCC-
T ss_pred             CCCccCCCCCCCCCcccCCCCCCcCCCCC-CCCCCccCCCCCCceecCCCccc-CCCCEE-ECCCCCcCCCcccC
Confidence            34678999999999999999999974332 22234433  221  11  1232 234678 89999988764433

>2c4f_L Coagulation factor VII precursor; blood coagulation, serine protease, EGF, EGF-like domain, GLA, receptor enzyme, glycoprotein, hydrolase, protease; HET: CGU GLC FUC NAG GIL; 1.72A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.32.1.1 PDB: 1w2k_L* 1w0y_L* 1z6j_L* 2b8o_L* 2aer_L* 2ec9_L* 2fir_L* 2a2q_L* 1fak_L* 1o5d_L* 1wqv_L* 1wss_L* 1wtg_L* 1wun_L* 1wv7_L* 1dan_L* 2aei_L* 2b7d_L* 2f9b_L* 2flb_L* ...

Probab=97.60  E-value=3e-05  Score=62.78  Aligned_cols=70  Identities=26%  Similarity=0.582  Sum_probs=51.2

Q ss_pred             CCcccccCCcc-cCCCCCCccCCCCceecCCCCccc-CCCCCC---C-CCCCCCceeecCCC-CcccCCCcCCCCCCcCC
Q psy826          162 KCHASCESGCS-TGGPKGCTKCKSGWAADKDIGCYD-INECSD---E-NICSGNQFCVNTEG-SYRCMQCDPSCNGCHGD  234 (329)
Q Consensus       162 ~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C~d-~~eC~~---~-~~C~~~~~C~n~~g-s~~C~~C~~~C~~C~g~  234 (329)
                      +|.++  ++|. ..++|.| .|++||.|.   .|.+ +++|..   . ..|.  +.|+++.+ +|+|.            
T Consensus        54 pC~n~--g~C~~~~g~y~C-~C~~G~~G~---~C~~~~~~c~~c~~~~~~C~--~~C~~~~g~~y~C~------------  113 (142)
T 2c4f_L           54 PCQNG--GSCKDQLQSYIC-FCLPAFEGR---NCETHKDDQLICVNENGGCE--QYCSDHTGTKRSCR------------  113 (142)
T ss_dssp             CCCTT--CEEEEETTEEEE-ECCTTEEST---TSCEEGGGCCSTTTGGGGCS--SEEECCTTSCCEEE------------
T ss_pred             CcCCC--CEEeCCCCCEEe-eCCCCccCC---ccccCccccccccCCCCCcc--CEeECCCCCCEEEE------------
Confidence            45554  4676 6778999 999999864   4665 566532   1 3342  38999999 99999            


Q ss_pred             cccccccCccccccc--CCcccccCc
Q psy826          235 GPDMCEACAEGYKLQ--QNICINTQA  258 (329)
Q Consensus       235 ~~~~C~~C~~Gy~~~--~~~C~~~~~  258 (329)
                             |++||.+.  +..|.++++
T Consensus       114 -------C~~Gy~l~~dG~~C~~~~e  132 (142)
T 2c4f_L          114 -------CHEGYSLLADGVSCTPTVE  132 (142)
T ss_dssp             -------CCTTEEECTTSSCEEESSS
T ss_pred             -------CCCCceECCCCCCCCCCCc
Confidence                   99999954  668988776

>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L

Probab=97.53  E-value=7.1e-05  Score=70.87  Aligned_cols=66  Identities=23%  Similarity=0.552  Sum_probs=45.3

Q ss_pred             CCcccCCCCCCCCceeecCCCCC---CCCCCcCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccCCCCceecC
Q psy826          115 NGKCKGNGTRKGNGQCVCNKEYT---GELCNECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       115 ~~~C~~~~~~~gs~~C~C~~G~~---g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~  190 (329)
                      .+.|.+   ++++|.|.|++||+   |..|+   +      .|++.. -.+|.    +.|. ..++|.| .|.+||.+..
T Consensus        11 ~~~C~~---~~~~y~C~C~~G~~~~~~~~C~---d------ideC~~-~~~C~----~~C~n~~g~~~C-~C~~g~~~~~   72 (400)
T 3p5b_L           11 SHVCND---LKIGYECLCPDGFQLVAQRRCE---D------IDECQD-PDTCS----QLCVNLEGGYKC-QCEEGFQLDP   72 (400)
T ss_dssp             SSEEEE---CSSSEEEECCTTEEECSSSCEE---E------CCCCST-TSSCS----SCCBCCSSSCBC-CCCTTCCCCT
T ss_pred             CCEeEC---CCCCeEEECCCCCCcCCCCccc---C------chhhhc-cCCCC----CccCCCccceee-eccccccccc
Confidence            468998   88999999999998   67772   1      222211 02343    4555 7889999 9999999876


Q ss_pred             CC-CcccCC
Q psy826          191 DI-GCYDIN  198 (329)
Q Consensus       191 ~~-~C~d~~  198 (329)
                      ++ .|.++.
T Consensus        73 ~~~~C~~~~   81 (400)
T 3p5b_L           73 HTKACKAVG   81 (400)
T ss_dssp             TTSSCCCST
T ss_pred             cccceeecc
Confidence            43 365443

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=97.46  E-value=6e-05  Score=50.54  Aligned_cols=37  Identities=24%  Similarity=0.543  Sum_probs=27.8

Q ss_pred             cCCCCCCCCCCCCcccCC--CCCCCCceeecCCCCCCCCCC
Q psy826          104 PCLGFPNVCFGNGKCKGN--GTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~--~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      +|.  .+||.++|+|...  ....+.|+|.|++||+|..|+
T Consensus        10 eC~--s~pC~NgGtC~~~~~~d~~~~y~C~C~~g~~G~~CE   48 (55)
T 3u7u_G           10 EKE--KTFCVNGGECFMVKDLSNPSRYLCKCPNEFTGDRCQ   48 (55)
T ss_dssp             STT--TTTSCTTCEEEEECCC--CCCEEEEECTTEESTTSC
T ss_pred             CCc--CCCCCCCCCcCCCCccCCCCCEeEeCCCCCcCCCcC
Confidence            553  4789999999420  015678999999999999995

>1uzk_A Fibrillin-1; glycoprotein, extra-cellular matrix, calcium, TB domain, disease mutation, extracellular matrix, polymorphism, cbegf domain; 1.35A {Homo sapiens} SCOP: g.3.11.1 g.3.11.1 g.23.1.1 PDB: 1uzj_A 1uzp_A 1uzq_A

Probab=97.44  E-value=5.2e-06  Score=68.73  Aligned_cols=108  Identities=20%  Similarity=0.495  Sum_probs=64.5

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCC----CCCCCcCCCCccccccCcCCCCCcCCcccccCCcc-cCC----CCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYT----GELCNECNTGYFQSYKDEKTILCSKCHASCESGCS-TGG----PKGC  179 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~----g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~----~~~C  179 (329)
                      +++|. +++|++   +.++|+|.|++||+    |..|+.-..+       .....-.+|.....++|. ..+    ++.|
T Consensus         9 ~~~C~-~~~C~n---~~gsy~C~C~~Gy~~~~~g~~C~d~~~~-------~C~~~~~~c~~~~~~~C~~~~~~~~~~~~C   77 (162)
T 1uzk_A            9 PTTCI-SGNCVN---TPGSYICDCPPDFELNPTRVGCVDTRSG-------NCYLDIRPRGDNGDTACSNEIGVGVSKASC   77 (162)
T ss_dssp             TTSSB-TSEEEE---ETTEEEEECCTTCEECTTSSBEECCCCE-------EEEEEC----------CEEEEEEEECHHHH
T ss_pred             CCCCC-CCEeEC---CCCCEEEeCCCCCeECCCCCcccCCCCC-------cccCCCcccCCCCCCcccCCcCCcccCcee
Confidence            35786 689998   89999999999998    6777421100       000000111100013555 333    6899


Q ss_pred             ccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcc--ccccc--CCcccc
Q psy826          180 TKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAE--GYKLQ--QNICIN  255 (329)
Q Consensus       180 ~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~--Gy~~~--~~~C~~  255 (329)
                       .|++||.+..  .|.         .|..     +..++|+|.                   |++  ||.++  +..|++
T Consensus        78 -~C~~G~~~~~--~C~---------~C~~-----~~~~~y~C~-------------------C~~g~G~~~~~~~~~c~d  121 (162)
T 1uzk_A           78 -CCSLGKAWGT--PCE---------MCPA-----VNTSEYKIL-------------------CPGGEGFRPNPITVILED  121 (162)
T ss_dssp             -HTTTCCEETT--TTE---------ECCC-----TTSHHHHHH-------------------CTTCTTEEECTTTCCEEE
T ss_pred             -eCCCCCCcCC--Ccc---------cCCC-----CCCCCceeE-------------------CCCCCCcccCCCCCccCc
Confidence             9999998532  232         2321     245678888                   988  99987  346899


Q ss_pred             cCcCCCCc
Q psy826          256 TQAKSQNT  263 (329)
Q Consensus       256 ~~~~~~~~  263 (329)
                      ++++...+
T Consensus       122 ideC~~~~  129 (162)
T 1uzk_A          122 IDECQELP  129 (162)
T ss_dssp             CCHHHHCG
T ss_pred             cccccCCC
Confidence            99987643

>1m6b_A C-ER, receptor protein-tyrosine kinase ERBB-3; cell surface receptor, immunity, signaling transferase; HET: NAG NDG; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3p11_A*

Probab=97.44  E-value=4.9e-05  Score=76.02  Aligned_cols=108  Identities=25%  Similarity=0.669  Sum_probs=48.0

Q ss_pred             CCCceee-cCCCCCCCCC-CcCCCCccc--cccCcCCCCCcCCccccc-----CCcccCCCCCCccCCCCceecCCCCcc
Q psy826          125 KGNGQCV-CNKEYTGELC-NECNTGYFQ--SYKDEKTILCSKCHASCE-----SGCSTGGPKGCTKCKSGWAADKDIGCY  195 (329)
Q Consensus       125 ~gs~~C~-C~~G~~g~~C-~~C~~g~y~--~~~~~~~~~C~~C~~~C~-----~~C~~~~~~~C~~C~~G~~~~~~~~C~  195 (329)
                      ++...|. |..-+.+..| ..|+.++|.  .+.  ....|.+||..|.     .+|.+++...|+.|.. |. .. +.|+
T Consensus       493 p~~~~C~sC~~~~~~g~Cv~~Cp~~~~~~~~y~--~~~~C~~Ch~~C~~~~~~~tC~Gp~~~~C~~C~~-~~-~~-~~Cv  567 (621)
T 1m6b_A          493 PGPGQCLSCRNYSRGGVCVTHCNFLNGEPREFA--HEAECFSCHPECQPMEGTATCNGSGSDTCAQCAH-FR-DG-PHCV  567 (621)
T ss_dssp             SSGGGBSSBSSEESSSCEESCCSSSCSSSCEEE--ETTEEEECCTTBCCCTTSCSBSSSSSTTBSSBSS-EE-ET-TEEE
T ss_pred             CCcCCcccccccccCCeecccCCCCcCCccccc--cCCeeccCCcchhccccccccCCCCccccccccc-cC-cC-Cccc
Confidence            3445574 6664456677 789887542  112  4667999999996     2788888889988984 42 22 3344


Q ss_pred             cCCCCCCCCCCCCCceee------cCCCCcccCCCcCCCC-CCcCCcccccccCccc
Q psy826          196 DINECSDENICSGNQFCV------NTEGSYRCMQCDPSCN-GCHGDGPDMCEACAEG  245 (329)
Q Consensus       196 d~~eC~~~~~C~~~~~C~------n~~gs~~C~~C~~~C~-~C~g~~~~~C~~C~~G  245 (329)
                            .  .|+.+.+=.      ....+..|.+||..|. .|.|++...|++|+..
T Consensus       568 ------~--~CP~G~~~~~~~i~ky~~~~~~C~~C~~~C~~~C~G~~~~~C~~c~~~  616 (621)
T 1m6b_A          568 ------S--SCPHGVLGAKGPIYKYPDVQNECRPCHENCTQGCKGPELQDCLGQTLV  616 (621)
T ss_dssp             ------S--SCCSSCCBTTCC------------------------------------
T ss_pred             ------c--cCCCCCccccccccccCCCCCccCCcCcccCCcCCCCCCCCCCccCcc
Confidence                  3  777665310      1124678999999998 8999999999988643

>1nl0_G Factor IX; immune system, antibody, GLA domain; HET: CGU; 2.20A {Homo sapiens} SCOP: g.32.1.1

Probab=97.36  E-value=2.3e-05  Score=50.82  Aligned_cols=45  Identities=22%  Similarity=0.415  Sum_probs=38.0

Q ss_pred             Cc-hhhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhhccC
Q psy826           16 DT-AWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQH   72 (329)
Q Consensus        16 ~~-~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~~~~   72 (329)
                      |+ .|||.+.|+++|      ||+|++|+     ..++++++++.+.+ ..+|..+.+
T Consensus         2 Ns~flEE~~~GnLER------EC~EE~Cs-----~EEArEvFe~~~~T-~~FW~~Y~d   47 (51)
T 1nl0_G            2 NSGKLEEFVQGNLER------ECMEEKCS-----FEEAREVFENTERT-TEFWKQYEE   47 (51)
T ss_dssp             CCSSSTTSSCCCHHH------HHTSSCCC-----HHHHHTTSSSHHHH-HHHHHHC--
T ss_pred             cchhhhhhcCCccee------hhhhccCC-----HHHHHHHhcCcHHH-HHHHHHhcc
Confidence            56 689999999999      99999999     99999999998777 577776665

>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}

Probab=97.30  E-value=0.00031  Score=72.26  Aligned_cols=66  Identities=23%  Similarity=0.547  Sum_probs=45.9

Q ss_pred             cccCCCCCCCCceeecCCCCC---CCCCCcCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccCCCCceecCC-
Q psy826          117 KCKGNGTRKGNGQCVCNKEYT---GELCNECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWAADKD-  191 (329)
Q Consensus       117 ~C~~~~~~~gs~~C~C~~G~~---g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~-  191 (329)
                      .|.+   +.++|.|.|++||.   |..|.   +      +++.... .+|.    +.|. ..++|.| .|.+||.+... 
T Consensus       325 ~C~~---~~~~y~C~C~~Gy~l~~g~~C~---d------ideC~~~-~~C~----~~C~n~~gsy~C-~C~~Gy~l~~~~  386 (791)
T 3m0c_C          325 VCND---LKIGYECLCPDGFQLVAQRRCE---D------IDECQDP-DTCS----QLCVNLEGGYKC-QCEEGFQLDPHT  386 (791)
T ss_dssp             EEEE---CSBSEEEECCTTCEEETTTEEE---C------CCCCSSS-SSCT----TTCCBCSSCBCC-CCCSSEECCSSC
T ss_pred             cccC---CCCCcccCCCCCCccCCCCccc---c------CcccCCC-CCCC----CeeecCCCCcee-ecCCCCEeCCCC
Confidence            6777   78899999999996   66772   1      2222110 1333    4565 7889999 99999999764 


Q ss_pred             CCcccCCCC
Q psy826          192 IGCYDINEC  200 (329)
Q Consensus       192 ~~C~d~~eC  200 (329)
                      ..|.+++++
T Consensus       387 ~~C~~~~~~  395 (791)
T 3m0c_C          387 KACKAVGSI  395 (791)
T ss_dssp             CCCEETTSC
T ss_pred             ceeeecccc
Confidence            358877655

>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A

Probab=97.30  E-value=0.0007  Score=68.76  Aligned_cols=65  Identities=23%  Similarity=0.552  Sum_probs=44.3

Q ss_pred             CcccCCCCCCCCceeecCCCCC---CCCCCcCCCCccccccCcCCCCCcCCcccccCCcc-cCCCCCCccCCCCceecCC
Q psy826          116 GKCKGNGTRKGNGQCVCNKEYT---GELCNECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGPKGCTKCKSGWAADKD  191 (329)
Q Consensus       116 ~~C~~~~~~~gs~~C~C~~G~~---g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~~~C~~C~~G~~~~~~  191 (329)
                      +.|.+   +.++|.|.|++||+   |..|.   +      +++.... .+|.    +.|. ..++|.| .|.+||.+...
T Consensus       306 ~~C~~---~~~~~~C~C~~G~~~~~~~~C~---d------ideC~~~-~~C~----~~C~n~~g~y~C-~C~~G~~~~~~  367 (699)
T 1n7d_A          306 HVCND---LKIGYECLCPDGFQLVAQRRCE---D------IDECQDP-DTCS----QLCVNLEGGYKC-QCEEGFQLDPH  367 (699)
T ss_dssp             TTCCC---CTTCCCCCCCSSSCCCSSSCCC---C------CCCCSSS-SSCT----TTCCBCSSCBCC-CCCSSCBCCSS
T ss_pred             CCccc---CCCCcEEeCCCCeEcCCCCccc---C------ccccCCC-Cccc----cccccCCCCeee-eeecccccCCC
Confidence            46777   78999999999999   55662   1      2222110 2333    4565 7889999 99999999764


Q ss_pred             -CCcccCC
Q psy826          192 -IGCYDIN  198 (329)
Q Consensus       192 -~~C~d~~  198 (329)
                       ..|.++.
T Consensus       368 ~~~C~~~~  375 (699)
T 1n7d_A          368 TKACKAVG  375 (699)
T ss_dssp             CCCCBCCS
T ss_pred             CCcccccc
Confidence             3476554

>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}

Probab=97.27  E-value=7.4e-05  Score=70.33  Aligned_cols=71  Identities=31%  Similarity=0.768  Sum_probs=19.4

Q ss_pred             CCCCCCCCCCCCcccCCCCCCCCceeecCCCCC----CCCCC---cCCCCccccccCcCCCCCcCCcccccCCcc-cCCC
Q psy826          105 CLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYT----GELCN---ECNTGYFQSYKDEKTILCSKCHASCESGCS-TGGP  176 (329)
Q Consensus       105 C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~----g~~C~---~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~-~~~~  176 (329)
                      |...+..|.  ..|.+   ..++|.|.|++||+    |..|.   +|..             -.+|.+    .|. .+++
T Consensus         6 C~~~~~~c~--~~C~~---~~g~~~C~C~~G~~l~~~~~~C~d~~eC~~-------------~~~C~~----~C~~~~g~   63 (386)
T 3v65_B            6 CNVNNGGCA--QKCQM---IRGAVQCTCHTGYRLTEDGRTCQDVNECAE-------------EGYCSQ----GCTNSEGA   63 (386)
T ss_dssp             ----------------------------------------------------------------CCTT----EEC-----
T ss_pred             ccCCCCCCC--CCCcC---CCCCcEeECCCCceECCCCCccCccceeCC-------------cCcccC----cCCCCCCC
Confidence            433333454  37876   68889999999998    77772   3431             023444    454 6889


Q ss_pred             CCCccCCCCceecCC-CCcccCC
Q psy826          177 KGCTKCKSGWAADKD-IGCYDIN  198 (329)
Q Consensus       177 ~~C~~C~~G~~~~~~-~~C~d~~  198 (329)
                      |.| .|.+||.+..+ ..|..++
T Consensus        64 ~~C-~C~~g~~l~~d~~~C~~~~   85 (386)
T 3v65_B           64 FQC-WCEAGYELRPDRRSCKALG   85 (386)
T ss_dssp             CCE-ECCTTEEECTTSSCEEECS
T ss_pred             CeE-EECCCceEcCCCCeECCcc
Confidence            999 99999998764 3476544

>4fbr_A Lectin, myxobacterial hemagglutinin; beta-barrel, HIV-inactivating, carbohydrate binding protein; 1.60A {Myxococcus xanthus} PDB: 4fbv_A*

Probab=97.27  E-value=5.2e-06  Score=73.93  Aligned_cols=86  Identities=7%  Similarity=-0.107  Sum_probs=54.7

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceec
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAAD  189 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~  189 (329)
                      .+|.++++|++   ..++|+|.|++||+|..|+.   .     +++    |.. +..|         ... .|.+|....
T Consensus        38 ~~c~ngG~C~~---g~~~y~C~Cp~Gf~G~~Ce~---n-----i~e----c~~-~~~c---------~s~-pC~nggtc~   91 (267)
T 4fbr_A           38 IKSDDGGKTLK---GTMTYNGEGPIGFRGTLSSA---N-----NYT----VEN-QWGG---------TSA-PWQPGGVWV   91 (267)
T ss_dssp             EECSSTTSEEE---EEEEETTSCCEEEEEEECST---T-----EEE----EEE-ESSS---------TTS-CEEEEEEEE
T ss_pred             CCcCCCCeecC---CCCCeEEeCCCCcccccccc---c-----ccc----ccc-ccCc---------CCC-cccCCCeee
Confidence            36888999998   78899999999999998841   1     000    000 0001         111 233333322


Q ss_pred             CCCCcccCCCCCCCCCCCCCceeecCCCCcccC
Q psy826          190 KDIGCYDINECSDENICSGNQFCVNTEGSYRCM  222 (329)
Q Consensus       190 ~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~  222 (329)
                      ....|.+.++|.+ .+|.++..|++...+|+|.
T Consensus        92 ~G~~c~~~~eC~s-~pC~ngG~C~~~~~sy~C~  123 (267)
T 4fbr_A           92 LGARDKQNIVAVS-IKSNDGGKTLTGTTTYNGE  123 (267)
T ss_dssp             CCCCSSCCEEEEE-EECSSTTSEEEEEEEETTS
T ss_pred             ccCccccccccCC-CCCCCCCEEecCCccEEee
Confidence            2234666667776 6788888898888899998

>3i2t_A Epidermal growth factor receptor, isoform A; EGFR, ectodomain, unliganded, autoinhibited, ATP nucleotide-binding, tyrosine-protein kinase; HET: NDG NAG BMA; 2.70A {Drosophila melanogaster} PDB: 3ltf_A* 3ltg_A

Probab=97.27  E-value=0.00028  Score=69.34  Aligned_cols=69  Identities=30%  Similarity=0.868  Sum_probs=50.3

Q ss_pred             CCccccc-CCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCC--CCceeecCCCCcccCCCcCCCCCCcCCcccc
Q psy826          162 KCHASCE-SGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICS--GNQFCVNTEGSYRCMQCDPSCNGCHGDGPDM  238 (329)
Q Consensus       162 ~C~~~C~-~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~--~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~  238 (329)
                      +||+.|. ..|.++++..|..|.. |...  +.|+      .  .|+  .+.+.   ..+.+|.+||+.|.+|+|+++.+
T Consensus       479 ~C~~~C~~~gC~Gpgp~~C~sC~~-~~~~--~~Cv------~--~C~~~~g~y~---~~~~~C~~Ch~~C~tC~G~~~~~  544 (551)
T 3i2t_A          479 ICSDQCNEDGCWGAGTDQCLNCKN-FNFN--GTCI------A--DCGYISNAYK---FDNRTCKICHPECRTCNGAGADH  544 (551)
T ss_dssp             SCCTTBCTTCBSSSSTTCBSSBSS-EEET--TEEE------S--CSCSSSCCCC---CSSSCCCCCCSSCSSBCC---CC
T ss_pred             CcCchhccCCCCCCCCCceeECcc-cCCC--CCcc------c--cCCCCCCccc---CCCCcccCCCCcccCCCCcCcCc
Confidence            4888885 5799999999999997 4332  3454      2  565  34442   35789999999999999999999


Q ss_pred             cccCcc
Q psy826          239 CEACAE  244 (329)
Q Consensus       239 C~~C~~  244 (329)
                      |++|+.
T Consensus       545 C~sC~h  550 (551)
T 3i2t_A          545 CQECVH  550 (551)
T ss_dssp             BSSCCC
T ss_pred             ccccCC
Confidence            999973

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=97.25  E-value=8.5e-05  Score=49.81  Aligned_cols=44  Identities=36%  Similarity=0.717  Sum_probs=34.8

Q ss_pred             CCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCcCCCC
Q psy826          198 NECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQAKSQN  262 (329)
Q Consensus       198 ~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~~~~~  262 (329)
                      |||... ..|.  +.|+|++|+|+|.                   |++||.+.  +..|++++++...
T Consensus         2 dEC~~~~~~C~--~~C~nt~Gsy~C~-------------------C~~Gy~L~~d~~~C~didec~cg   48 (55)
T 2jkh_L            2 KLCSLDNGDCD--QFCHEEQNSVVCS-------------------CARGYTLADNGKACIPTGPYPCG   48 (55)
T ss_dssp             CCTTTGGGGCS--SEEEEETTEEEEE-------------------CCTTEEECTTSSCEEESSSSCTT
T ss_pred             ccccCCCCCcC--cEeEcCCCCeEEe-------------------CCCCCEECCCCCeeccCccccCC
Confidence            567654 5674  5899999999999                   99999964  6689999887643

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=97.22  E-value=3.8e-05  Score=68.82  Aligned_cols=47  Identities=17%  Similarity=0.499  Sum_probs=38.8

Q ss_pred             ccCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCcccccCcCC
Q psy826          195 YDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKS  260 (329)
Q Consensus       195 ~d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~~~~~~  260 (329)
                      .|+|||... +.|..++.|+|+.|+|.|.                   |++||.+++..|.+++++.
T Consensus         3 ~DiDEC~~~~~~C~~~a~C~Nt~Gsy~C~-------------------C~~Gy~GnG~~C~d~d~Pq   50 (285)
T 1gl4_A            3 LAQQTCANNRHQCSVHAECRDYATGFCCR-------------------CVANYTGNGRQCVAEGSPQ   50 (285)
T ss_dssp             ----CHHHHGGGSCTTEEEEECSSCEEEE-------------------ECTTEEECSSSEEETTCEE
T ss_pred             ccchhccCCCCCCCCCCEeEcCCCCeEEE-------------------cCCCCCCCCCcCCCCCCCc
Confidence            478999865 7899899999999999999                   9999999999999988743

>1j34_C Coagulation factor IX; magnesium ION, calcium ION, GLA domain, protein binding/blood clotting complex; HET: CGU; 1.55A {Bos taurus} SCOP: g.32.1.1 PDB: 1j35_C* 1cfh_A 1cfi_A* 1mgx_A 1iod_G*

Probab=97.20  E-value=7.2e-05  Score=47.38  Aligned_cols=42  Identities=21%  Similarity=0.446  Sum_probs=36.4

Q ss_pred             Cc-hhhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhh
Q psy826           16 DT-AWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFK   69 (329)
Q Consensus        16 ~~-~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~   69 (329)
                      |+ .+||.+.|+.+|      ||+|++|+     ..+.++++++.+.+. .+|..
T Consensus         2 Ns~~lEE~~~GnLER------EC~EE~Cs-----~EEArEvFe~~~~T~-~FW~~   44 (46)
T 1j34_C            2 NSGKLEEFVRGNLER------ECKEEKCS-----FEEAREVFENTEKTT-EFWKQ   44 (46)
T ss_dssp             CCSSSGGGSCCCHHH------HHTSSCCC-----HHHHHHHHCCHHHHH-HHHHH
T ss_pred             cchhhhhhcCCcccc------hhhhccCC-----HHHHHHHhcCcHHHH-HHHHh
Confidence            56 689999999999      99999999     999999999987774 56643

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=97.13  E-value=0.00017  Score=44.54  Aligned_cols=31  Identities=29%  Similarity=0.778  Sum_probs=27.2

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .++|.++++|++   +.++|+|.|++||+|..|+
T Consensus         8 ~~pC~ngg~C~~---~~~~~~C~C~~G~~G~~Ce   38 (39)
T 1edm_B            8 SNPCLNGGSCKD---DINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             TCCCCTTCEEEE---ETTEEEEECCTTCCSTTSC
T ss_pred             CCCCCCCCEeEc---CCCceEeECCCCCcCCccC
Confidence            367999999997   7889999999999999874

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=97.13  E-value=0.00014  Score=51.14  Aligned_cols=47  Identities=32%  Similarity=0.617  Sum_probs=38.3

Q ss_pred             ccCCCCCCC-CCCCCCceeecCCC-CcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCcCCCC
Q psy826          195 YDINECSDE-NICSGNQFCVNTEG-SYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQAKSQN  262 (329)
Q Consensus       195 ~d~~eC~~~-~~C~~~~~C~n~~g-s~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~~~~~  262 (329)
                      +|+++|... ..|  .+.|+|++| +|.|.                   |++||.+.  +.+|++++++.-.
T Consensus         3 ~d~~eC~~~nggC--~h~C~n~~g~s~~C~-------------------C~~Gy~L~~D~~tC~d~dec~Cg   53 (69)
T 1kli_L            3 DDQLICVNENGGC--EQYCSDHTGTKRSCR-------------------CHEGYSLLADGVSCTPTVEYPCG   53 (69)
T ss_dssp             SCCCCTTSGGGGC--SSEEEEETTTEEEEE-------------------CCTTEEECTTSSCEEECSSSCTT
T ss_pred             cccccccCCCCCc--CCEeEcCCCCCEEEe-------------------CCCCCeECCCCCcccCcccccCC
Confidence            578899765 668  568999998 89999                   99999975  6689999887543

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=97.09  E-value=0.00012  Score=63.56  Aligned_cols=99  Identities=27%  Similarity=0.655  Sum_probs=59.0

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCCcCCCCccccccCcCCCCCc------CCcccccCCcccCCCCCCccC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQSYKDEKTILCS------KCHASCESGCSTGGPKGCTKC  182 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~------~C~~~C~~~C~~~~~~~C~~C  182 (329)
                      ...|.++|.|..       +.|.|.+||+|..|+ |+.+.+...  .....|.      +|...  ++|.   ...| .|
T Consensus        95 ~~~Csg~G~C~~-------g~C~C~~G~~G~~Ce-c~~~~~~~~--~~~~~C~~~~~~~~Csg~--G~C~---~g~C-~C  158 (217)
T 2p28_B           95 RSLCHGKGFLEC-------GICRCDTGYIGKNCE-CQTQGRSSQ--ELEGSCRKDNNSIICSGL--GDCV---CGQC-LC  158 (217)
T ss_dssp             -CTTTTSEEEET-------TEEEECTTEESTTSC-EECCCCC-G--GGGGGGBSSTTSCBGGGT--EEEE---TTEE-EE
T ss_pred             CCccCCCceEEC-------CEEECCCCccCCccc-ccCcccccc--cCCCcCCCCCCCCCCCCC--CEEe---CCce-EC
Confidence            356888888874       789999999999996 554432100  0011222      23322  3444   2479 99


Q ss_pred             CCCc------eecCCCCcc-cCCCCCCC--CCCCCC--ceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          183 KSGW------AADKDIGCY-DINECSDE--NICSGN--QFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       183 ~~G~------~~~~~~~C~-d~~eC~~~--~~C~~~--~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      .+||      .|..   |. +.+.|...  ..|..+  ..|..    ..|.                   |.+||.|.
T Consensus       159 ~~gw~~~~~~~G~~---Ce~~~~~C~~~~g~~C~~~~~G~C~~----g~C~-------------------C~~G~~G~  210 (217)
T 2p28_B          159 HTSDVPGKLIYGQY---CECDTINCERYNGQVCGGPGRGLCFC----GKCR-------------------CHPGFEGS  210 (217)
T ss_dssp             CCCCSTTCCEESTT---SCEESSCSCEETTEETTCTTTEEEET----TEEE-------------------ECTTEEST
T ss_pred             CCCCCCcccEECCC---cccCCccCCCCCCCCCCCCCCcEEeC----CeeE-------------------CCCCCccC
Confidence            9995      5543   53 34556542  246554  56663    2566                   99999886

>1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine kinase, glycoprotein, antigen:antibody complex, FAB fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A*

Probab=97.07  E-value=0.00027  Score=70.74  Aligned_cols=104  Identities=27%  Similarity=0.744  Sum_probs=69.1

Q ss_pred             CCCceee-cCCCCCCCCC-CcCCCCccc--cccCcCCCCCcCCcccccC-----CcccCCCCCCccCCCCceecCCCCcc
Q psy826          125 KGNGQCV-CNKEYTGELC-NECNTGYFQ--SYKDEKTILCSKCHASCES-----GCSTGGPKGCTKCKSGWAADKDIGCY  195 (329)
Q Consensus       125 ~gs~~C~-C~~G~~g~~C-~~C~~g~y~--~~~~~~~~~C~~C~~~C~~-----~C~~~~~~~C~~C~~G~~~~~~~~C~  195 (329)
                      ++...|. |..-+.+..| ..|+.+++.  .+.+  ...|.+||..|..     +|.+++...|+.|+. |. .. +.| 
T Consensus       494 p~~~~C~sC~~~~~~g~Cv~~Cp~~~~~~~~y~~--~~~C~~Ch~~C~~~~~~~tC~Gp~~~~C~sC~~-~~-~~-g~C-  567 (624)
T 1yy9_A          494 PEPRDCVSCRNVSRGRECVDKCKLLEGEPREFVE--NSECIQCHPECLPQAMNITCTGRGPDNCIQCAH-YI-DG-PHC-  567 (624)
T ss_dssp             SSGGGBSSBSSEESSSCEESCCCSSSSSSCEEEE--TTEEEECCTTBCCCSSSCSBSSSSTTSBSSBSS-EE-ET-TEE-
T ss_pred             CCcccccccCeeeeCCEecccCCCccccccccCC--CCcCcCcCHhHhccccCCccCCCCccccccccc-cC-cC-Cee-
Confidence            3445564 6643346677 688875321  1122  5679999999973     798888899999983 33 22 334 


Q ss_pred             cCCCCCCCCCCCCCceeecC-------CCCcccCCCcCCCC-CCcCCccccccc
Q psy826          196 DINECSDENICSGNQFCVNT-------EGSYRCMQCDPSCN-GCHGDGPDMCEA  241 (329)
Q Consensus       196 d~~eC~~~~~C~~~~~C~n~-------~gs~~C~~C~~~C~-~C~g~~~~~C~~  241 (329)
                           ..  .|+.+.+=.+.       ..+..|.+|+..|. +|.|++..+|..
T Consensus       568 -----v~--~CP~Gy~~~~~~~~~~y~~~~~~C~~C~~~C~k~C~G~~~~~C~~  614 (624)
T 1yy9_A          568 -----VK--TCPAGVMGENNTLVWKYADAGHVCHLCHPNCTYGCTGPGLRGCPT  614 (624)
T ss_dssp             -----ES--SCCEEECCGGGCCEEEEECTTSBEEECCTTCTTCCSSSSGGGSCC
T ss_pred             -----cc--cCCCCcccccccccccccCCCCccCCCCCCcCCcCCCCCcccCCC
Confidence                 43  77766542221       25678999999997 899999998873

>2ahx_A P180ERBB4, receptor tyrosine-protein kinase ERBB-4; X-RAY crystallography, neuregulins, heparin-binding, cell CY signaling protein; HET: NAG NDG; 2.40A {Homo sapiens} PDB: 3u2p_A*

Probab=97.02  E-value=0.00039  Score=69.52  Aligned_cols=91  Identities=22%  Similarity=0.475  Sum_probs=59.7

Q ss_pred             CCCCCC-------CCCCccCCCCCCCC-CCCCcccCCCCCCCCceee-cCCCCCCCCC-CcCCCCccccc-----cCcCC
Q psy826           93 CPVDHY-------GADCKPCLGFPNVC-FGNGKCKGNGTRKGNGQCV-CNKEYTGELC-NECNTGYFQSY-----KDEKT  157 (329)
Q Consensus        93 C~~G~~-------G~~C~~C~~~~~~C-~~~~~C~~~~~~~gs~~C~-C~~G~~g~~C-~~C~~g~y~~~-----~~~~~  157 (329)
                      ||.+++       ...|.+|+..+..+ ....+|.+    ++...|. |.....+..| ..|++|||...     ..+..
T Consensus       512 Cp~~~~~~~~~~~~~~C~~Ch~~C~~~~~~~~tC~G----p~~~~C~~C~~~~~~~~Cv~~CP~G~~~~~~~~~~y~~~~  587 (617)
T 2ahx_A          512 CNLYDGEFREFENDSICVECDPQCEKMEDGLLTCHG----PGPDNCTKCSHFKDGPNCVEKCPDGLQGANSFIFKYADPD  587 (617)
T ss_dssp             CSSSSSSSCEEEETTEEEECCTTBCCCCTTCCSBSS----SSTTSBSSBSSEEETTEEESSCCEEEEBSSSEEEEEECTT
T ss_pred             cCCCcCcccccCCCCchhhcChhhhccccCCCccCC----CCCCccccCcccccCCceeccCCCCcccccccceeccCCC
Confidence            777643       34566676543222 11135664    3445564 6643346778 78999998541     01246


Q ss_pred             CCCcCCcccccCCcccCCCCCCccCCCCce
Q psy826          158 ILCSKCHASCESGCSTGGPKGCTKCKSGWA  187 (329)
Q Consensus       158 ~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~  187 (329)
                      ..|.+||..|..+|.+++...|++|+++|.
T Consensus       588 ~~C~~Ch~~C~~~C~Gp~~~~C~sC~~~y~  617 (617)
T 2ahx_A          588 RECHPCHPNCTQGCNGPTSHDCIYYPWTGH  617 (617)
T ss_dssp             SBEEECCTTCTTCBSSSSTTCBCCCTTSCC
T ss_pred             CcccccCccccccCCCCCCCcCCCCCCCCC
Confidence            789999999986799999999999998873

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=96.95  E-value=0.00037  Score=66.02  Aligned_cols=36  Identities=25%  Similarity=0.573  Sum_probs=29.4

Q ss_pred             CCCC-CcccCCCCCCCCceeecCCCCCCCCCCcCCCCccc
Q psy826          112 CFGN-GKCKGNGTRKGNGQCVCNKEYTGELCNECNTGYFQ  150 (329)
Q Consensus       112 C~~~-~~C~~~~~~~gs~~C~C~~G~~g~~C~~C~~g~y~  150 (329)
                      |.++ +.|..   ..+.+.|.|+.++.|..|+.|.+|||+
T Consensus       299 CnGHas~C~~---~~g~~~C~C~~~ttG~~CE~C~pgy~~  335 (426)
T 3zyj_B          299 CNLHATVCVY---DNSKLTCECEHNTTGPDCGKCKKNYQG  335 (426)
T ss_dssp             CSSSCSCEEE---ETTEEEECCCTTEESSSSCEECTTCCS
T ss_pred             CCCchhhcCC---CCCCceeeCCCCCcCCCcccccccccc
Confidence            6555 46775   455689999999999999999999985

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=96.94  E-value=0.00053  Score=43.77  Aligned_cols=30  Identities=23%  Similarity=0.613  Sum_probs=26.1

Q ss_pred             CCCCCCCccc--CCCCCCCCceeecCCCCCCCCCC
Q psy826          110 NVCFGNGKCK--GNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       110 ~~C~~~~~C~--~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      +||.++++|.  +   ..++|+|.|++||+|..|+
T Consensus         9 ~pC~ngg~C~~~~---~~~~~~C~C~~G~~G~~Ce   40 (45)
T 1a3p_A            9 GYCLNGGVXMHIE---SLDSYTCNCVIGYSGDRCQ   40 (45)
T ss_dssp             SCCSSSCEEEECT---TTSSEEEECCTTEETTTTC
T ss_pred             CCCCCCCEEEeec---CCCCEEEEcCCCCcCCcCC
Confidence            4899999997  4   5788999999999999884

>1lqv_C Vitamin-K dependent protein C; GLA (gamma-carboxyglutamic acid) residues, phospholipid BIND groove, Ca ION binding, blood clotting; HET: CGU NAG NDG PTY; 1.60A {Homo sapiens} SCOP: g.32.1.1 PDB: 3jtc_C*

Probab=96.92  E-value=0.00012  Score=42.67  Aligned_cols=30  Identities=17%  Similarity=0.412  Sum_probs=25.1

Q ss_pred             CchhhhhccCcccccceEEEecccCcccCcccCccchhhHH
Q psy826           16 DTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFA   56 (329)
Q Consensus        16 ~~~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~   56 (329)
                      |+.|||.++|+.+|      ||+|++|+     ..+..+++
T Consensus         2 ns~~Ee~~~gnlER------EC~EE~Cs-----~EEarEvf   31 (33)
T 1lqv_C            2 NSFLEELRHSSLER------ECIEEICD-----FEEAKEIF   31 (33)
T ss_dssp             CCTTGGGSCCCHHH------HHTSSCCC-----HHHHHHHH
T ss_pred             cchhhhccCCchhh------HHHHhhCC-----HHHHHHHh
Confidence            77899999999999      99999999     55555443

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=96.91  E-value=0.00037  Score=45.99  Aligned_cols=40  Identities=38%  Similarity=0.932  Sum_probs=30.9

Q ss_pred             ccCCCCCCC---------CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccc
Q psy826          195 YDINECSDE---------NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICIN  255 (329)
Q Consensus       195 ~d~~eC~~~---------~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~  255 (329)
                      +|||||...         ..|.  +.|+|++|+|.|.                   |++||.+.  +..|++
T Consensus         2 ~DidEC~~~~~~~~~~~~~~C~--~~C~n~~Gsy~C~-------------------C~~Gy~~~~d~~~C~~   52 (53)
T 1apq_A            2 VDLDECASRSKSGEEDPQPQCQ--HLCHNYVGGYFCS-------------------CRPGYELQEDRHSCQA   52 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTS--SEEEEETTEEEEE-------------------CSTTCEECTTSSCEEC
T ss_pred             CccccccCcccccccccCCCCC--CEeECCCCCeEEE-------------------CCCCCeECCCCCccCC
Confidence            468888752         4684  5999999999999                   99999975  445653

>1edm_B Factor IX; epidermal growth factor, EGF, calcium- binding, EGF-like domain, structure and function, coagulation factor; 1.50A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ixa_A

Probab=96.91  E-value=0.00038  Score=42.89  Aligned_cols=34  Identities=29%  Similarity=0.710  Sum_probs=30.0

Q ss_pred             cCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          196 DINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       196 d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      |+++|.. .+|.++..|++..++|.|.                   |++||.+.
T Consensus         2 d~d~C~~-~pC~ngg~C~~~~~~~~C~-------------------C~~G~~G~   35 (39)
T 1edm_B            2 DGDQCES-NPCLNGGSCKDDINSYECW-------------------CPFGFEGK   35 (39)
T ss_dssp             CCCTTTT-CCCCTTCEEEEETTEEEEE-------------------CCTTCCST
T ss_pred             ccccCCC-CCCCCCCEeEcCCCceEeE-------------------CCCCCcCC
Confidence            6788876 6899999999999999999                   99999875

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=96.85  E-value=0.00073  Score=44.41  Aligned_cols=35  Identities=20%  Similarity=0.612  Sum_probs=27.3

Q ss_pred             cccCCcc-cCCCCCCccCCCCceecCCC-CcccCCCCC
Q psy826          166 SCESGCS-TGGPKGCTKCKSGWAADKDI-GCYDINECS  201 (329)
Q Consensus       166 ~C~~~C~-~~~~~~C~~C~~G~~~~~~~-~C~d~~eC~  201 (329)
                      .|.+.|. .++++.| .|++||.+..++ .|+|++||.
T Consensus         7 ~C~~~C~n~~gs~~C-~C~~Gy~L~~d~~tC~dide~p   43 (51)
T 1kig_L            7 GCDQFCREERSEVRC-SCAHGYVLGDDSKSCVSTERFP   43 (51)
T ss_dssp             SSSSCCCEETTEECC-CCCTTEEECTTSSCEEECSSSC
T ss_pred             CcCCEeEcCCCCeEE-eCCCCcEECCCCCccccCCccc
Confidence            3445666 7889999 999999987654 599999873

>2p28_B Integrin beta-2; hybrid domain, PSI domain, I-EGF DOM cell adhesion; HET: NAG; 2.20A {Homo sapiens} PDB: 1l3y_A

Probab=96.82  E-value=0.00028  Score=61.12  Aligned_cols=78  Identities=26%  Similarity=0.727  Sum_probs=48.8

Q ss_pred             CcCCCCCCCCCCc-------------cCCC--CCCCCCCCCcccCCCCCCCCceeecCCC------CCCCCCC----cCC
Q psy826           91 RCCPVDHYGADCK-------------PCLG--FPNVCFGNGKCKGNGTRKGNGQCVCNKE------YTGELCN----ECN  145 (329)
Q Consensus        91 ~~C~~G~~G~~C~-------------~C~~--~~~~C~~~~~C~~~~~~~gs~~C~C~~G------~~g~~C~----~C~  145 (329)
                      +.|++||+|..|+             .|..  ...+|.++|+|..       ++|.|.+|      |+|..|+    .|+
T Consensus       109 C~C~~G~~G~~Cec~~~~~~~~~~~~~C~~~~~~~~Csg~G~C~~-------g~C~C~~gw~~~~~~~G~~Ce~~~~~C~  181 (217)
T 2p28_B          109 CRCDTGYIGKNCECQTQGRSSQELEGSCRKDNNSIICSGLGDCVC-------GQCLCHTSDVPGKLIYGQYCECDTINCE  181 (217)
T ss_dssp             EEECTTEESTTSCEECCCCC-GGGGGGGBSSTTSCBGGGTEEEET-------TEEEECCCCSTTCCEESTTSCEESSCSC
T ss_pred             EECCCCccCCcccccCcccccccCCCcCCCCCCCCCCCCCCEEeC-------CceECCCCCCCcccEECCCcccCCccCC
Confidence            4499999999997             1322  1356777788874       68999999      6898884    243


Q ss_pred             CCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceecC
Q psy826          146 TGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       146 ~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~  190 (329)
                      ..        ....|.. +..  ++|..   ..| .|.+||.|..
T Consensus       182 ~~--------~g~~C~~-~~~--G~C~~---g~C-~C~~G~~G~~  211 (217)
T 2p28_B          182 RY--------NGQVCGG-PGR--GLCFC---GKC-RCHPGFEGSA  211 (217)
T ss_dssp             EE--------TTEETTC-TTT--EEEET---TEE-EECTTEESTT
T ss_pred             CC--------CCCCCCC-CCC--cEEeC---Cee-ECCCCCccCC
Confidence            21        0111221 200  23431   489 9999999865

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=96.77  E-value=0.0015  Score=61.45  Aligned_cols=40  Identities=28%  Similarity=0.723  Sum_probs=29.1

Q ss_pred             CCCCCc-ccCCC-CCCCCceeecCCCCCCCCCCcCCCCcccc
Q psy826          112 CFGNGK-CKGNG-TRKGNGQCVCNKEYTGELCNECNTGYFQS  151 (329)
Q Consensus       112 C~~~~~-C~~~~-~~~gs~~C~C~~G~~g~~C~~C~~g~y~~  151 (329)
                      |.+++. |.... .....+.|.|..++.|..|+.|.+|||+.
T Consensus       268 CnGHA~~C~~~~~~~~~~g~C~C~hnT~G~~CErC~pGy~g~  309 (403)
T 2y38_A          268 CHGHADVCDAKDPLDPFRLQCACQHNTCGGSCDRCCPGFNQQ  309 (403)
T ss_dssp             CTTBCSCEEESCTTSTTCEEECCCTTEESSSCCEECTTCCSS
T ss_pred             cCCCccccCCCCCCCccceEeECcCcCcCCCCCCCCccccCC
Confidence            666654 75211 11224679999999999999999999975

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=96.77  E-value=0.00084  Score=44.47  Aligned_cols=30  Identities=27%  Similarity=0.742  Sum_probs=26.6

Q ss_pred             CCCCCCCccc--CCCCCCCCceeecCCCCCCCCCC
Q psy826          110 NVCFGNGKCK--GNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       110 ~~C~~~~~C~--~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ++|.++|+|.  +   ..++|.|.|++||+|..|+
T Consensus        12 ~pC~ngg~C~~~~---~~~~~~C~C~~G~~G~~Ce   43 (53)
T 1egf_A           12 GYCLNGGVCMHIE---SLDSYTCNCVIGYSGDRCQ   43 (53)
T ss_dssp             CSSCSSCEEEEES---SSSCEEEECCTTCCSSSSC
T ss_pred             CcCCCCcEEEeeC---CCCCEEEECCCCCcCCcCC
Confidence            5799999998  6   6789999999999999885

>1yy9_A Epidermal growth factor receptor; cell surface receptor, tyrosine kinase, glycoprotein, antigen:antibody complex, FAB fragment, antitumor, drug; HET: NDG NAG BMA MAN; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3qwq_A* 1nql_A* 3b2v_A* 1ivo_A* 3njp_A*

Probab=96.70  E-value=0.0018  Score=64.80  Aligned_cols=84  Identities=33%  Similarity=0.803  Sum_probs=60.8

Q ss_pred             cCCccccc-CCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCC----ceeecCCCCcccCCCcCCCC------
Q psy826          161 SKCHASCE-SGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGN----QFCVNTEGSYRCMQCDPSCN------  229 (329)
Q Consensus       161 ~~C~~~C~-~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~----~~C~n~~gs~~C~~C~~~C~------  229 (329)
                      ..||..|. ++|++++...|.+|.. | ... +.|+      .  .|+.+    .+..+   ..+|.+||+.|.      
T Consensus       480 ~~C~~~C~~g~C~Gp~~~~C~sC~~-~-~~~-g~Cv------~--~Cp~~~~~~~~y~~---~~~C~~Ch~~C~~~~~~~  545 (624)
T 1yy9_A          480 QVCHALCSPEGCWGPEPRDCVSCRN-V-SRG-RECV------D--KCKLLEGEPREFVE---NSECIQCHPECLPQAMNI  545 (624)
T ss_dssp             CSCCTTBCTTCBSSSSGGGBSSBSS-E-ESS-SCEE------S--CCCSSSSSSCEEEE---TTEEEECCTTBCCCSSSC
T ss_pred             CCcCCcCCCCCCCCCCcccccccCe-e-eeC-CEec------c--cCCCccccccccCC---CCcCcCcCHhHhccccCC
Confidence            47899996 5899888899999983 3 322 4454      2  56532    12222   568999999998      


Q ss_pred             CCcCCcccccccCcccccccCCcccccCcCC
Q psy826          230 GCHGDGPDMCEACAEGYKLQQNICINTQAKS  260 (329)
Q Consensus       230 ~C~g~~~~~C~~C~~Gy~~~~~~C~~~~~~~  260 (329)
                      +|+|+++.+|++|+.  ..+++.|++.++..
T Consensus       546 tC~Gp~~~~C~sC~~--~~~~g~Cv~~CP~G  574 (624)
T 1yy9_A          546 TCTGRGPDNCIQCAH--YIDGPHCVKTCPAG  574 (624)
T ss_dssp             SBSSSSTTSBSSBSS--EEETTEEESSCCEE
T ss_pred             ccCCCCccccccccc--cCcCCeecccCCCC
Confidence            999999999999983  45678898776554

>1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1

Probab=96.69  E-value=0.0015  Score=63.58  Aligned_cols=98  Identities=18%  Similarity=0.485  Sum_probs=57.9

Q ss_pred             CCceee-cCCCCCCCCC-CcCCCCccccccCcCCCCCcCCcccccCCcccCCCCCC-ccCCCCceecCCCCcccCCCCCC
Q psy826          126 GNGQCV-CNKEYTGELC-NECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGC-TKCKSGWAADKDIGCYDINECSD  202 (329)
Q Consensus       126 gs~~C~-C~~G~~g~~C-~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C-~~C~~G~~~~~~~~C~d~~eC~~  202 (329)
                      +...|. |.....+..| ..|++|||.+.   ... +..+++.|. .   .-...| ..|+.+|.....+.|+      .
T Consensus       220 ~~~~C~~C~~~~~~~~Cv~~Cp~g~y~~~---~~~-~~~~~p~~~-~---~~~~~Cv~~Cp~~~~l~~~g~Cv------~  285 (501)
T 1mox_A          220 RESDCLVCRKFRDEATCKDTCPPLMLYNP---TTY-QMDVNPEGK-Y---SFGATCVKKCPRNYVVTDHGSCV------R  285 (501)
T ss_dssp             SSTTEEEESSEEETTEEESSCCCSEEEET---TTT-EEEECTTCC-E---EETTEEESSCCTTCEECTTSBEE------S
T ss_pred             CCcccccccccCCCCcccccCCCCeeecC---Cce-EEecCCCcc-c---cchhhhhcccCcccEeccCCEEe------c
Confidence            345574 7776557788 79999987432   111 112222221 1   112456 2688999883334454      3


Q ss_pred             CCCCCCCceeecCCCCcccCCCcCCC-CCCcCCccccc
Q psy826          203 ENICSGNQFCVNTEGSYRCMQCDPSC-NGCHGDGPDMC  239 (329)
Q Consensus       203 ~~~C~~~~~C~n~~gs~~C~~C~~~C-~~C~g~~~~~C  239 (329)
                        .|+.+.+=....+...|.+|+..| ++|.|++....
T Consensus       286 --~Cp~G~y~~~~~~~~~C~~C~~~C~k~C~G~~~~~~  321 (501)
T 1mox_A          286 --ACGADSYEMEEDGVRKCKKCEGPCRKVCNGIGIGEF  321 (501)
T ss_dssp             --SCCSSCCCBCSSSSCBCCCC-CCCCCEEECBTSGGG
T ss_pred             --cCCCCCeecCCCCCCcCcCCCccccccccccCcccc
Confidence              787776622223456899999999 99999877543

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=96.67  E-value=0.00048  Score=45.73  Aligned_cols=31  Identities=29%  Similarity=0.695  Sum_probs=26.7

Q ss_pred             CCCCCCCCccc--CCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCK--GNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~--~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .++|.++|+|.  +   ..+++.|.|++||+|..|+
T Consensus        11 ~~pC~nGG~C~~~~---~~~~~~C~C~~GytG~~Ce   43 (53)
T 1nql_B           11 DGYCLHDGVCMYIE---ALDKYACNCVVGYIGERCQ   43 (53)
T ss_dssp             CCEECTTCEEEEET---TTTEEEEEECTTEESTTSC
T ss_pred             CCCCCCCeEEeeec---CCCCEEEecCCCCcCCCCC
Confidence            47899999997  4   4678999999999999985

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=96.63  E-value=0.00016  Score=47.78  Aligned_cols=40  Identities=20%  Similarity=0.534  Sum_probs=30.0

Q ss_pred             CCCCCCCCCCccCCCCCCCCCCCCcccCCC-CCCCCceeecCCCCCCCCCC
Q psy826           93 CPVDHYGADCKPCLGFPNVCFGNGKCKGNG-TRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus        93 C~~G~~G~~C~~C~~~~~~C~~~~~C~~~~-~~~gs~~C~C~~G~~g~~C~  142 (329)
                      |++||.          .++|.++|+|.... ...+++.|.|++||+|..|+
T Consensus         7 C~~g~~----------~~pC~NGGtC~~~~~~~~~~y~C~C~~Gf~G~~Ce   47 (52)
T 3ca7_A            7 CPETFD----------AWYCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (52)
T ss_dssp             CCHHHH----------HHTSCTTCEEEEEEETTEEEEEEECCTTEESTTSC
T ss_pred             CCCCCc----------CCcCCCCCEEecCccCCCCCEEEECCCCCcCCCCc
Confidence            777774          45788999998410 02456899999999999885

>3i2t_A Epidermal growth factor receptor, isoform A; EGFR, ectodomain, unliganded, autoinhibited, ATP nucleotide-binding, tyrosine-protein kinase; HET: NDG NAG BMA; 2.70A {Drosophila melanogaster} PDB: 3ltf_A* 3ltg_A

Probab=96.63  E-value=0.0022  Score=62.99  Aligned_cols=40  Identities=35%  Similarity=0.855  Sum_probs=27.9

Q ss_pred             CC-CcCCCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCC
Q psy826          140 LC-NECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKS  184 (329)
Q Consensus       140 ~C-~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~  184 (329)
                      .| ..|+.+++   .+.....|  ||..|.++|.+++...|..|..
T Consensus       191 ~C~~~C~~~~c---~~~~~~~C--Ch~~C~g~C~gp~~~~C~~C~~  231 (551)
T 3i2t_A          191 TCSPQCAGGRC---YGPKPREC--CHLFCAGGCTGPTQKDCIACKN  231 (551)
T ss_dssp             SSCSSSTTCCC---SSSSSSCC--CCSSEEEEESSSSSTTEEEESS
T ss_pred             ccCCcCCCCcc---cCCCCCcc--cCcccCCCCCCCCccccccchh
Confidence            45 46766543   12223445  8999988999888899998887

>1mox_A Epidermal growth factor receptor; EGFR, receptor, complex, transferase-growth F complex; HET: NAG FUC BMA MAN; 2.50A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1

Probab=96.62  E-value=0.0019  Score=62.91  Aligned_cols=82  Identities=29%  Similarity=0.694  Sum_probs=56.5

Q ss_pred             CCCCCcCCccccc-CCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCC-CCcC
Q psy826          156 KTILCSKCHASCE-SGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCN-GCHG  233 (329)
Q Consensus       156 ~~~~C~~C~~~C~-~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~-~C~g  233 (329)
                      ....|.+|+..|. ..|+++++..|..|..       .      .|..  .|+.+.+  . .....|  ||+.|. +|+|
T Consensus       159 ~~~~C~~C~~~C~~~~Cwg~~~~~C~~c~~-------~------~C~~--~C~~~~~--~-~~~~~C--Ch~~C~~~C~g  218 (501)
T 1mox_A          159 HLGSCQKCDPSCPNGSCWGAGEENCQKLTK-------I------ICAQ--QCSGRCR--G-KSPSDC--CHNQCAAGCTG  218 (501)
T ss_dssp             SSCCCCCCCTTSGGGCBSSSSGGGBCCCSS-------S------SCCT--TCSSCBS--S-SSTTSB--CCTTEEEEESS
T ss_pred             CCccCCCCCccccCCCCCCCCcccceecCC-------C------cccC--cCCcccc--c-CCCCCe--ECCccCCccCC
Confidence            3457888999994 3699888889977642       1      2443  5653322  1 234567  999998 9999


Q ss_pred             CcccccccCcccccccCCcccccCcC
Q psy826          234 DGPDMCEACAEGYKLQQNICINTQAK  259 (329)
Q Consensus       234 ~~~~~C~~C~~Gy~~~~~~C~~~~~~  259 (329)
                      |++.+|++|+..  ..++.|++.++.
T Consensus       219 p~~~~C~~C~~~--~~~~~Cv~~Cp~  242 (501)
T 1mox_A          219 PRESDCLVCRKF--RDEATCKDTCPP  242 (501)
T ss_dssp             SSSTTEEEESSE--EETTEEESSCCC
T ss_pred             CCCccccccccc--CCCCcccccCCC
Confidence            999999999874  345567655544

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.59  E-value=0.00034  Score=67.61  Aligned_cols=69  Identities=26%  Similarity=0.771  Sum_probs=32.8

Q ss_pred             cCCCCCCCCCCc--cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC--cCCCCccccccCcCCCCCcCCcccc
Q psy826           92 CCPVDHYGADCK--PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN--ECNTGYFQSYKDEKTILCSKCHASC  167 (329)
Q Consensus        92 ~C~~G~~G~~C~--~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~--~C~~g~y~~~~~~~~~~C~~C~~~C  167 (329)
                      .|+++|+|..|.  .|..   +|.+ ++|..      .+.|.|.+||+|..|+  .|..               +|... 
T Consensus       380 ~C~~~~~g~~c~~~~C~~---~C~n-G~C~~------~~~C~C~~G~~G~~C~~~~C~~---------------~C~~~-  433 (463)
T 2wg3_C          380 ECRATVQPAQTLTSECSR---LCRN-GYCTP------TGKCCCSPGWEGDFCRTAKCEP---------------ACRHG-  433 (463)
T ss_dssp             GGCCCCCCCCCCCCHHHH---HCCS-EEECT------TSCEEECTTEESTTSCEECC-----------------------
T ss_pred             cCCCCCcCCCCccccccC---CCCC-CccCC------CCeECCCCCcCCCcCCcCcCCC---------------CCCCC-
Confidence            499999999886  4543   4874 89985      2589999999999984  2321               44443 


Q ss_pred             cCCcccCCCCCCccCCCCceecC
Q psy826          168 ESGCSTGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       168 ~~~C~~~~~~~C~~C~~G~~~~~  190 (329)
                       ++|..+  +.| .|.+||.|..
T Consensus       434 -g~C~~~--~~C-~C~~G~~G~~  452 (463)
T 2wg3_C          434 -GVCVRP--NKC-LCKKGYLGPQ  452 (463)
T ss_dssp             -----------------------
T ss_pred             -CEECCC--CEE-ECCCCcccCC
Confidence             467643  699 9999999865

>1n8y_C Protooncoprotein; tyrosin kinase receptor, cell surface receptor, transferase; HET: NAG; 2.40A {Rattus norvegicus} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 1n8z_C* 3be1_A* 1s78_A* 3mzw_A* 3n85_A* 2a91_A* 3h3b_A

Probab=96.59  E-value=0.00093  Score=66.58  Aligned_cols=83  Identities=27%  Similarity=0.763  Sum_probs=60.7

Q ss_pred             CCccccc-CCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCC-----CceeecCCCCcccCCCcCCC------C
Q psy826          162 KCHASCE-SGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSG-----NQFCVNTEGSYRCMQCDPSC------N  229 (329)
Q Consensus       162 ~C~~~C~-~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~-----~~~C~n~~gs~~C~~C~~~C------~  229 (329)
                      +||..|. ..|+++++..|..|.. |.. . +.|+      .  .|+.     +.+    .....|.+||+.|      .
T Consensus       489 ~C~~~C~~~~CwG~~~~~C~~C~~-~~~-~-~~Cv------~--~C~~~~g~~~~~----~~~~~C~~Ch~~C~~~~~~~  553 (608)
T 1n8y_C          489 VCNSLCAHGHCWGPGPTQCVNCSH-FLR-G-QECV------E--ECRVWKGLPREY----VSDKRCLPCHPECQPQNSSE  553 (608)
T ss_dssp             SCCTTBGGGCBSSSSTTCBSSBSS-EEE-T-TEEE------S--CCSSSSSSSCEE----CSSSBCEECCTTBCCCSSSC
T ss_pred             CcCCCCCCCCCCCCCccccccccc-cCc-C-Cccc------c--cCCCCCCcCccc----CCCCcccccchhhcccccCC
Confidence            7899883 4799999999988985 332 2 3444      2  4543     222    2346899999999      4


Q ss_pred             CCcCCcccccccCcccccccCCcccccCcCCC
Q psy826          230 GCHGDGPDMCEACAEGYKLQQNICINTQAKSQ  261 (329)
Q Consensus       230 ~C~g~~~~~C~~C~~Gy~~~~~~C~~~~~~~~  261 (329)
                      +|+||++.+|++|+.  ..+++.|++.++...
T Consensus       554 ~C~Gp~~~~C~~C~~--~~~~g~Cv~~CP~g~  583 (608)
T 1n8y_C          554 TCFGSEADQCAACAH--YKDSSSCVARCPSGV  583 (608)
T ss_dssp             SBSSSSGGGBSSBSS--EEETTEEESSCCEEE
T ss_pred             ccCCCCCCCCccccc--cCcCCeEcccCCCCc
Confidence            999999999999995  456789988776543

>1m6b_A C-ER, receptor protein-tyrosine kinase ERBB-3; cell surface receptor, immunity, signaling transferase; HET: NAG NDG; 2.60A {Homo sapiens} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 3p11_A*

Probab=96.57  E-value=0.00096  Score=66.70  Aligned_cols=84  Identities=26%  Similarity=0.739  Sum_probs=62.7

Q ss_pred             CCccccc-CCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCc----eeecCCCCcccCCCcCCCC------C
Q psy826          162 KCHASCE-SGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQ----FCVNTEGSYRCMQCDPSCN------G  230 (329)
Q Consensus       162 ~C~~~C~-~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~----~C~n~~gs~~C~~C~~~C~------~  230 (329)
                      .||..|. ++|.+++...|.+|.. |. .. +.|+      .  .|+.+.    +-.   ...+|.+||+.|.      +
T Consensus       480 ~C~~~C~~ggC~Gp~~~~C~sC~~-~~-~~-g~Cv------~--~Cp~~~~~~~~y~---~~~~C~~Ch~~C~~~~~~~t  545 (621)
T 1m6b_A          480 VCDPLCSSGGCWGPGPGQCLSCRN-YS-RG-GVCV------T--HCNFLNGEPREFA---HEAECFSCHPECQPMEGTAT  545 (621)
T ss_dssp             SCCTTBCTTCBSSSSGGGBSSBSS-EE-SS-SCEE------S--CCSSSCSSSCEEE---ETTEEEECCTTBCCCTTSCS
T ss_pred             CcCccccCCCCCCCCcCCcccccc-cc-cC-Ceec------c--cCCCCcCCccccc---cCCeeccCCcchhccccccc
Confidence            7999996 6899888899999997 32 22 4454      2  565432    111   3678999999998      9


Q ss_pred             CcCCcccccccCcccccccCCcccccCcCCC
Q psy826          231 CHGDGPDMCEACAEGYKLQQNICINTQAKSQ  261 (329)
Q Consensus       231 C~g~~~~~C~~C~~Gy~~~~~~C~~~~~~~~  261 (329)
                      |+|+++.+|++|+. | .+++.|++.++...
T Consensus       546 C~Gp~~~~C~~C~~-~-~~~~~Cv~~CP~G~  574 (621)
T 1m6b_A          546 CNGSGSDTCAQCAH-F-RDGPHCVSSCPHGV  574 (621)
T ss_dssp             BSSSSSTTBSSBSS-E-EETTEEESSCCSSC
T ss_pred             cCCCCccccccccc-c-CcCCcccccCCCCC
Confidence            99999999999984 4 56789998776654

>1kig_L Factor XA; glycoprotein, serine protease, plasma, blood coagulation, complex (protease/inhibitor); 3.00A {Bos taurus} SCOP: g.3.11.1

Probab=96.46  E-value=0.0013  Score=43.26  Aligned_cols=37  Identities=35%  Similarity=0.786  Sum_probs=29.6

Q ss_pred             CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCcCCC
Q psy826          204 NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQAKSQ  261 (329)
Q Consensus       204 ~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~~~~  261 (329)
                      ..|  .+.|+|++|+|+|.                   |++||.+.  +..|+++++..-
T Consensus         6 g~C--~~~C~n~~gs~~C~-------------------C~~Gy~L~~d~~tC~dide~pC   44 (51)
T 1kig_L            6 GGC--DQFCREERSEVRCS-------------------CAHGYVLGDDSKSCVSTERFPC   44 (51)
T ss_dssp             TSS--SSCCCEETTEECCC-------------------CCTTEEECTTSSCEEECSSSCT
T ss_pred             CCc--CCEeEcCCCCeEEe-------------------CCCCcEECCCCCccccCCcccC
Confidence            356  34799999999999                   99999964  668999887643

>2jkh_L Factor X light chain; plasma, calcium, zymogen, secreted, protease, hydrolase, polymorphism, glycoprotein, gamma-carboxyglutamic acid; HET: BI7; 1.25A {Homo sapiens} PDB: 2bok_L* 2vvc_K* 2vvu_L* 2vvv_L* 2vwl_L* 2vwm_K* 2vwn_L* 2vwo_L* 2xbv_L* 2xbw_L* 2xbx_L* 2xby_L* 2xc0_L* 2xc4_L* 2xc5_L* 2gd4_L* 3kl6_B* 2y5f_L* 2y5g_L* 2y5h_L* ...

Probab=96.44  E-value=0.001  Score=44.37  Aligned_cols=36  Identities=17%  Similarity=0.490  Sum_probs=28.2

Q ss_pred             cccCCcc-cCCCCCCccCCCCceecCCC-CcccCCCCCC
Q psy826          166 SCESGCS-TGGPKGCTKCKSGWAADKDI-GCYDINECSD  202 (329)
Q Consensus       166 ~C~~~C~-~~~~~~C~~C~~G~~~~~~~-~C~d~~eC~~  202 (329)
                      .|.+.|. .+++|.| .|++||.+..++ .|+++++|..
T Consensus        10 ~C~~~C~nt~Gsy~C-~C~~Gy~L~~d~~~C~didec~c   47 (55)
T 2jkh_L           10 DCDQFCHEEQNSVVC-SCARGYTLADNGKACIPTGPYPC   47 (55)
T ss_dssp             GCSSEEEEETTEEEE-ECCTTEEECTTSSCEEESSSSCT
T ss_pred             CcCcEeEcCCCCeEE-eCCCCCEECCCCCeeccCccccC
Confidence            3445666 7889999 999999987654 5999998854

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=96.41  E-value=0.00041  Score=47.43  Aligned_cols=37  Identities=30%  Similarity=0.630  Sum_probs=31.6

Q ss_pred             CcccCCCCCCCCCCCCC--ceeecCCCCcccCCCcCCCCCCcCCcccccccCccccc-cc
Q psy826          193 GCYDINECSDENICSGN--QFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYK-LQ  249 (329)
Q Consensus       193 ~C~d~~eC~~~~~C~~~--~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~-~~  249 (329)
                      .+.++|+|.. .+|.++  ..|+++.++|.|.                   |++||. |.
T Consensus         7 ~~~~~d~C~s-nPC~nga~gtC~~~~g~y~C~-------------------C~~Gy~~G~   46 (61)
T 2k2s_B            7 LSETPAACSS-NPCGPEAAGTCKETNSGYICR-------------------CNQGYRISL   46 (61)
T ss_dssp             CTTSCCHHHH-CSSCSSSCCEEEECSSEEEEE-------------------CCTTEEEEE
T ss_pred             hcCCCCcCcC-CCCcCCCccccccCCCceEeE-------------------CCCCCccCC
Confidence            3567888876 689988  7999999999999                   999998 75

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=96.41  E-value=0.002  Score=60.25  Aligned_cols=65  Identities=23%  Similarity=0.452  Sum_probs=40.2

Q ss_pred             CCCceeecCCCCCCCCCCcCCCCccccccC----cCCCCCcCCc--ccccCCcc--------cCCCCCCccCCCCceecC
Q psy826          125 KGNGQCVCNKEYTGELCNECNTGYFQSYKD----EKTILCSKCH--ASCESGCS--------TGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       125 ~gs~~C~C~~G~~g~~C~~C~~g~y~~~~~----~~~~~C~~C~--~~C~~~C~--------~~~~~~C~~C~~G~~~~~  190 (329)
                      .+.+.|.|+.||.|..|+.|.+|||+....    .....|.+|.  ..- ..|.        ......|..|++|+.|..
T Consensus       269 ~~~~~C~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g-~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~  347 (375)
T 4aqt_A          269 FDKLMCNCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRS-QECYFDPELYRSTGHGGHCTNCRDNTDGAK  347 (375)
T ss_dssp             TSCEEECCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSC-SCEEECHHHHHHSSCCEEECSCTTTEESTT
T ss_pred             CCCeeeeCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCC-CCcccccccCccCCCCCCCCCCCCCCcCCC
Confidence            456789999999999999999999974321    1233455543  110 0110        122346745888887765

>4aqt_A Laminin subunit gamma-1; cell adhesion; HET: NAG BMA; 3.20A {Mus musculus}

Probab=96.38  E-value=0.0026  Score=59.48  Aligned_cols=70  Identities=29%  Similarity=0.718  Sum_probs=41.2

Q ss_pred             cCCCCCCCCCCccCCCCC--CCCC-----CCCccc-----CCCC-----------CCCCceee-cCCCCCCCCCCcCCCC
Q psy826           92 CCPVDHYGADCKPCLGFP--NVCF-----GNGKCK-----GNGT-----------RKGNGQCV-CNKEYTGELCNECNTG  147 (329)
Q Consensus        92 ~C~~G~~G~~C~~C~~~~--~~C~-----~~~~C~-----~~~~-----------~~gs~~C~-C~~G~~g~~C~~C~~g  147 (329)
                      .|++||.|..|+.|.++.  .+|.     ....|.     ..+.           ....++|. |++||+|..|+.|.+|
T Consensus       275 ~C~~nt~G~~Ce~C~~gy~~~p~~~g~~~~~~~C~~C~Cn~~g~~C~~d~~~~~c~~~~G~C~~C~~n~~G~~Ce~C~~G  354 (375)
T 4aqt_A          275 NCKHNTYGVDCEKCLPFFNDRPWRRATAESASECLPCDCNGRSQECYFDPELYRSTGHGGHCTNCRDNTDGAKCERCREN  354 (375)
T ss_dssp             CCCTTEESTTSCEECTTCCSSCCCCCCSSCCCCCCCCCGGGSCSCEEECHHHHHHSSCCEEECSCTTTEESTTSCEECSS
T ss_pred             eCcCCCcCCCcccCCCCCcCCCCCCCccCCCCCCCCCcCcCCCCCcccccccCccCCCCCCCCCCCCCCcCCCCCCCCcC
Confidence            389999999999775421  2221     111121     1000           13457784 8888889889889998


Q ss_pred             ccccccCcCCCCCcCCc
Q psy826          148 YFQSYKDEKTILCSKCH  164 (329)
Q Consensus       148 ~y~~~~~~~~~~C~~C~  164 (329)
                      ||+.   .....|.+|.
T Consensus       355 yyg~---~~~~~C~pCa  368 (375)
T 4aqt_A          355 FFRL---GNTEACSPAA  368 (375)
T ss_dssp             EECC---TTCSSCEEC-
T ss_pred             cccC---cCCCCCcCCc
Confidence            8853   2333455553

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=96.37  E-value=0.0011  Score=43.90  Aligned_cols=37  Identities=30%  Similarity=0.661  Sum_probs=28.4

Q ss_pred             ccccCCcc-cCC-CCCCccCCCCceecCCC-CcccCCCCCC
Q psy826          165 ASCESGCS-TGG-PKGCTKCKSGWAADKDI-GCYDINECSD  202 (329)
Q Consensus       165 ~~C~~~C~-~~~-~~~C~~C~~G~~~~~~~-~C~d~~eC~~  202 (329)
                      ..|.+.|. .++ ++.| .|++||.+..++ .|.|++||.-
T Consensus         7 ggC~~~C~n~~ggs~~C-~C~~Gy~L~~Dg~tC~d~dec~c   46 (53)
T 2bz6_L            7 GGCEQYCSDHTGTKRSC-RCHEGYSLLADGVSCTPTVEYPC   46 (53)
T ss_dssp             GGCSSEEEEETTTEEEE-ECCTTEEECTTSSCEEECSSSCT
T ss_pred             CCcCCEeEcCCCCCEEe-eCCCCCEECCCCCcccCCccccC
Confidence            34556676 567 6999 999999997654 5999998853

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=96.25  E-value=0.0018  Score=41.58  Aligned_cols=32  Identities=28%  Similarity=0.629  Sum_probs=24.7

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .+||.+ |+|.... ..+++.|.|.+||+|..|+
T Consensus        11 ~~pC~n-G~C~~~~-~~~~~~C~C~~GytG~~Ce   42 (46)
T 1k36_A           11 NGYCLH-GQCIYLV-DMSQNYCRCEVGYTGVRCE   42 (46)
T ss_dssp             CSSCSS-EEEEEET-TTTEEEEEECTTCSSTTSC
T ss_pred             CCCCCC-CEeeccC-CCCCEEEECCCCCccCCCC
Confidence            378987 8998411 1357999999999999885

>1kli_L Factor VIIA; extrinsic coagulation pathway, serine protease activation, R drug design, substrate-assisted catalysis, hydrolase; 1.69A {Homo sapiens} SCOP: g.3.11.1 PDB: 1klj_L 1jbu_L 1ygc_L*

Probab=96.19  E-value=0.002  Score=45.21  Aligned_cols=38  Identities=29%  Similarity=0.654  Sum_probs=30.0

Q ss_pred             cccccCCcc-cCC-CCCCccCCCCceecCCC-CcccCCCCCC
Q psy826          164 HASCESGCS-TGG-PKGCTKCKSGWAADKDI-GCYDINECSD  202 (329)
Q Consensus       164 ~~~C~~~C~-~~~-~~~C~~C~~G~~~~~~~-~C~d~~eC~~  202 (329)
                      +++|.+.|. .++ ++.| .|++||.+..++ .|.++++|.-
T Consensus        12 nggC~h~C~n~~g~s~~C-~C~~Gy~L~~D~~tC~d~dec~C   52 (69)
T 1kli_L           12 NGGCEQYCSDHTGTKRSC-RCHEGYSLLADGVSCTPTVEYPC   52 (69)
T ss_dssp             GGGCSSEEEEETTTEEEE-ECCTTEEECTTSSCEEECSSSCT
T ss_pred             CCCcCCEeEcCCCCCEEE-eCCCCCeECCCCCcccCcccccC
Confidence            456767786 677 7999 999999997654 5999998854

>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A

Probab=96.18  E-value=0.0012  Score=63.85  Aligned_cols=50  Identities=32%  Similarity=0.808  Sum_probs=17.7

Q ss_pred             eecccccCcCCCCCCCCCCc--cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826           84 LCINKLKRCCPVDHYGADCK--PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus        84 ~C~~~~~~~C~~G~~G~~C~--~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .|+....+.|++||.|..|+  .|..   +|.++++|.+    .  +.|.|.+||+|..|+
T Consensus       403 ~C~~~~~C~C~~G~~G~~C~~~~C~~---~C~~~g~C~~----~--~~C~C~~G~~G~~C~  454 (463)
T 2wg3_C          403 YCTPTGKCCCSPGWEGDFCRTAKCEP---ACRHGGVCVR----P--NKCLCKKGYLGPQCE  454 (463)
T ss_dssp             EECTTSCEEECTTEESTTSCEECC-------------------------------------
T ss_pred             ccCCCCeECCCCCcCCCcCCcCcCCC---CCCCCCEECC----C--CEEECCCCcccCCCC
Confidence            56665667799999999997  6754   7998999986    2  689999999999884

>2kl7_A Fibulin-4; secreted, calcium, disease mutation, disulfide bond, EGF- like domain, glycoprotein, polymorphism, structural genomics, PSI-2; NMR {Homo sapiens}

Probab=96.16  E-value=0.0099  Score=41.77  Aligned_cols=32  Identities=28%  Similarity=0.614  Sum_probs=24.5

Q ss_pred             cCCCCCCCCCCCCcccCCCCCCCCceee-cCCCCCC
Q psy826          104 PCLGFPNVCFGNGKCKGNGTRKGNGQCV-CNKEYTG  138 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~~~~~gs~~C~-C~~G~~g  138 (329)
                      +|....++|..++.|+|   +.|+|+|. +..||.+
T Consensus         5 EC~~~~~~C~~~~~C~N---t~Gsy~C~~~~~g~~~   37 (71)
T 2kl7_A            5 ECLTIPEACKGEMKCIN---HYGGYLCLPRSAAVIN   37 (71)
T ss_dssp             CTTCCCCSCTTEEEEEE---TTCCEEEEETTSCCCS
T ss_pred             cccCCCCCCCCCCEeEC---CCCCeEecccCCcccc
Confidence            55555567987889999   99999998 5567764

>1nl1_A Prothrombin; hydrolase; HET: CGU NAG; 1.90A {Bos taurus} SCOP: g.14.1.1 g.32.1.1 PDB: 2pf2_A* 2pf1_A* 1nl2_A* 2spt_A*

Probab=96.01  E-value=0.0013  Score=53.19  Aligned_cols=44  Identities=18%  Similarity=0.326  Sum_probs=36.9

Q ss_pred             Cc-hhhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhhcc
Q psy826           16 DT-AWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQ   71 (329)
Q Consensus        16 ~~-~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~~~   71 (329)
                      |+ +|||.+.|+++|      ||+|++|+     .+++.++++..+.+.+ +|..+.
T Consensus         2 n~~~~ee~~~g~ler------ec~ee~c~-----~eea~e~~~~~~~T~~-FW~kY~   46 (147)
T 1nl1_A            2 NKGFLEEVRKGNLER------ECLEEPCS-----REEAFEALESLSATDA-FWAKYT   46 (147)
T ss_dssp             CCSSSGGGSCCCHHH------HHTSSCCC-----HHHHHHHSSCHHHHHH-HHHHHH
T ss_pred             cccchhhhcCCchhh------ccccccCC-----HHHHHHHHhcccchhh-hccccc
Confidence            55 689999999999      99999999     9999999998887754 454443

>2k2s_B Micronemal protein 6; microneme protein complex, cell adhesion, cytoplasmic vesicl lectin, virulence, EGF-like domain, membrane; NMR {Toxoplasma gondii} PDB: 2k2t_A

Probab=95.96  E-value=0.0013  Score=44.95  Aligned_cols=31  Identities=29%  Similarity=0.531  Sum_probs=26.7

Q ss_pred             CCCCCCC--CcccCCCCCCCCceeecCCCCC-CCCCC
Q psy826          109 PNVCFGN--GKCKGNGTRKGNGQCVCNKEYT-GELCN  142 (329)
Q Consensus       109 ~~~C~~~--~~C~~~~~~~gs~~C~C~~G~~-g~~C~  142 (329)
                      ++||.++  ++|.+   ..++|.|.|++||+ |..|+
T Consensus        16 snPC~nga~gtC~~---~~g~y~C~C~~Gy~~G~~C~   49 (61)
T 2k2s_B           16 SNPCGPEAAGTCKE---TNSGYICRCNQGYRISLDGT   49 (61)
T ss_dssp             HCSSCSSSCCEEEE---CSSEEEEECCTTEEEEECSS
T ss_pred             CCCCcCCCcccccc---CCCceEeECCCCCccCCCCC
Confidence            3679887  79998   78899999999999 98873

>2y38_A Laminin subunit alpha-5; structural protein, cell adhesion, basement membrane; HET: NAG; 2.90A {Mus musculus}

Probab=95.92  E-value=0.004  Score=58.63  Aligned_cols=27  Identities=37%  Similarity=1.040  Sum_probs=20.6

Q ss_pred             CCCceee-cCCCCCCCCCCcCCCCcccc
Q psy826          125 KGNGQCV-CNKEYTGELCNECNTGYFQS  151 (329)
Q Consensus       125 ~gs~~C~-C~~G~~g~~C~~C~~g~y~~  151 (329)
                      .+++.|. |..++.|..|+.|.+|||+.
T Consensus       354 ~~~G~C~~C~~nt~G~~CErC~~GYyg~  381 (403)
T 2y38_A          354 QGGGVCLDCQHHTTGINCERCLPGFFRA  381 (403)
T ss_dssp             CCCEEESSCCSSEESTTSCEECTTCEEC
T ss_pred             CCCCCCCCCcCcCcCCCCCcCCCCccCC
Confidence            3567885 88888888888888888863

>3u7u_G Neuregulin 1; signaling protein, transferase-transferase regulator complex glycosylation; HET: NAG; 3.03A {Homo sapiens}

Probab=95.86  E-value=0.0034  Score=41.86  Aligned_cols=35  Identities=17%  Similarity=0.471  Sum_probs=28.9

Q ss_pred             ccCCCCCCCCCCCCCceee-----cCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          195 YDINECSDENICSGNQFCV-----NTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       195 ~d~~eC~~~~~C~~~~~C~-----n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      +++|||.. .+|.++..|.     +..++|.|.                   |++||.|.
T Consensus         6 ~~~~eC~s-~pC~NgGtC~~~~~~d~~~~y~C~-------------------C~~g~~G~   45 (55)
T 3u7u_G            6 VKCAEKEK-TFCVNGGECFMVKDLSNPSRYLCK-------------------CPNEFTGD   45 (55)
T ss_dssp             EECCSTTT-TTSCTTCEEEEECCC--CCCEEEE-------------------ECTTEEST
T ss_pred             ccCCCCcC-CCCCCCCCcCCCCccCCCCCEeEe-------------------CCCCCcCC
Confidence            57889987 7999999994     556789999                   99999986

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=95.78  E-value=0.0044  Score=42.44  Aligned_cols=34  Identities=24%  Similarity=0.581  Sum_probs=26.6

Q ss_pred             CCCCCCCCcccCC--CCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGN--GTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~--~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .+||.++|+|.+.  ....++|.|.|++||+|..|+
T Consensus        11 ~~pC~ngG~C~~~~~~~~~~~y~C~C~~Gf~G~~Ce   46 (63)
T 1hae_A           11 KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             HTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred             CCcCCCCcEEecCCccCCCCCEEEECCCCCcCCccC
Confidence            3679999999841  013578999999999999994

>2bz6_L Blood coagulation factor VIIA; serine protease, enzyme complex, hydrolase; HET: 346; 1.6A {Homo sapiens} SCOP: g.3.11.1 PDB: 1w8b_L* 1w7x_L* 1cvw_L*

Probab=95.78  E-value=0.0029  Score=41.83  Aligned_cols=37  Identities=32%  Similarity=0.685  Sum_probs=30.0

Q ss_pred             CCCCCCceeecCCC-CcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCcCCC
Q psy826          204 NICSGNQFCVNTEG-SYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQAKSQ  261 (329)
Q Consensus       204 ~~C~~~~~C~n~~g-s~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~~~~  261 (329)
                      ..|  .+.|+|+++ +|.|.                   |++||.+.  +.+|++++++.-
T Consensus         7 ggC--~~~C~n~~ggs~~C~-------------------C~~Gy~L~~Dg~tC~d~dec~c   46 (53)
T 2bz6_L            7 GGC--EQYCSDHTGTKRSCR-------------------CHEGYSLLADGVSCTPTVEYPC   46 (53)
T ss_dssp             GGC--SSEEEEETTTEEEEE-------------------CCTTEEECTTSSCEEECSSSCT
T ss_pred             CCc--CCEeEcCCCCCEEee-------------------CCCCCEECCCCCcccCCccccC
Confidence            356  458999998 79999                   99999975  668999988754

>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}

Probab=95.76  E-value=0.0075  Score=58.43  Aligned_cols=35  Identities=29%  Similarity=0.756  Sum_probs=21.7

Q ss_pred             CcCCCCccccccCcCCCCCcCCcccccCCcccCCCCC-CccCC
Q psy826          142 NECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKG-CTKCK  183 (329)
Q Consensus       142 ~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~-C~~C~  183 (329)
                      ..|+.++|.   +  ...|  ||..|.++|.++++.. |..|.
T Consensus       194 ~~C~~~~c~---~--~~~C--Ch~~C~ggC~GP~~~~~ClsC~  229 (486)
T 2hr7_A          194 TICKSHGCT---A--EGLC--CHSECLGNCSQPDDPTKCVACR  229 (486)
T ss_dssp             GGGTTSCBC---T--TCCB--CCTTBCSCBSSSSCTTSBSSBS
T ss_pred             ccCCCCCCc---C--CCCc--cCcccccCCCCCCCCCccccCc
Confidence            466665542   1  3445  7888876788777666 76543

>1egf_A Epidermal growth factor; NMR {Mus musculus} SCOP: g.3.11.1 PDB: 1epg_A 1eph_A 1epi_A 1epj_A 3egf_A 1gk5_A

Probab=95.67  E-value=0.0054  Score=40.44  Aligned_cols=38  Identities=26%  Similarity=0.691  Sum_probs=30.9

Q ss_pred             cCCCCCCC--CCCCCCceee--cCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCccc
Q psy826          196 DINECSDE--NICSGNQFCV--NTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICI  254 (329)
Q Consensus       196 d~~eC~~~--~~C~~~~~C~--n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~  254 (329)
                      ++++|...  .+|.++..|+  +..++|.|.                   |++||.|.  .|.
T Consensus         2 ~i~~C~~~~~~pC~ngg~C~~~~~~~~~~C~-------------------C~~G~~G~--~Ce   43 (53)
T 1egf_A            2 SYPGCPSSYDGYCLNGGVCMHIESLDSYTCN-------------------CVIGYSGD--RCQ   43 (53)
T ss_dssp             EECCCCTTSSCSSCSSCEEEEESSSSCEEEE-------------------CCTTCCSS--SSC
T ss_pred             CcccCCCCCCCcCCCCcEEEeeCCCCCEEEE-------------------CCCCCcCC--cCC
Confidence            56788763  4899999999  788999999                   99999875  554

>1n8y_C Protooncoprotein; tyrosin kinase receptor, cell surface receptor, transferase; HET: NAG; 2.40A {Rattus norvegicus} SCOP: c.10.2.5 c.10.2.5 g.3.9.1 g.3.9.1 PDB: 1n8z_C* 3be1_A* 1s78_A* 3mzw_A* 3n85_A* 2a91_A* 3h3b_A

Probab=95.67  E-value=0.019  Score=57.12  Aligned_cols=82  Identities=24%  Similarity=0.671  Sum_probs=55.6

Q ss_pred             CCCCCcCCcccc-cCCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCC-CCcC
Q psy826          156 KTILCSKCHASC-ESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCN-GCHG  233 (329)
Q Consensus       156 ~~~~C~~C~~~C-~~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~-~C~g  233 (329)
                      ....|..|+..| ...|++++...|..|..       .      .|..  .|+   .|.. .....|  ||+.|. +|+|
T Consensus       167 ~~~~C~~C~~~C~~~~CWg~~~~~Cq~~~~-------~------~C~~--~C~---~c~~-~~~~~C--Ch~~C~ggC~g  225 (608)
T 1n8y_C          167 RSRACPPCAPACKDNHCWGESPEDCQILTG-------T------ICTS--GCA---RCKG-RLPTDC--CHEQCAAGCTG  225 (608)
T ss_dssp             CSSCCCCCCTTCSSSCBSSSSTTCBCCCSS-------T------TCCT--TCS---CBSS-SSGGGB--CCTTBSSCBSS
T ss_pred             CCccCCCcCcccCCCceeCcCccceeecCC-------C------ccCC--CCc---cccC-CCCCCc--cChhhCccCCC
Confidence            345688888888 35799888888865531       1      2333  453   2222 224567  999997 9999


Q ss_pred             CcccccccCcccccccCCcccccCcCC
Q psy826          234 DGPDMCEACAEGYKLQQNICINTQAKS  260 (329)
Q Consensus       234 ~~~~~C~~C~~Gy~~~~~~C~~~~~~~  260 (329)
                      |++.+|.+|+. | .+++.|++.++..
T Consensus       226 p~~~~C~aC~~-~-~~~g~Cv~~CP~~  250 (608)
T 1n8y_C          226 PKHSDCLACLH-F-NHSGICELHCPAL  250 (608)
T ss_dssp             SSTTSBSSBSS-E-EETTEEESSCCCS
T ss_pred             CCCCccccCcc-c-ccCCchhccCCCc
Confidence            99999999986 3 3466787766554

>3fl7_A Ephrin receptor; ATP-binding, kinase, nucleotide-binding, transfera phosphorylation, transmembrane, tyrosine-protein kinase, glycoprotein; HET: NAG; 2.50A {Homo sapiens} PDB: 2x10_A* 2x11_A 3mx0_A* 3mbw_A*

Probab=95.31  E-value=0.0071  Score=59.38  Aligned_cols=61  Identities=26%  Similarity=0.721  Sum_probs=46.0

Q ss_pred             CCCceeecCCCCC--CCCCCcCCCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceecC
Q psy826          125 KGNGQCVCNKEYT--GELCNECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       125 ~gs~~C~C~~G~~--g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~  190 (329)
                      ...+.|.|.+||.  +..|+.|+.|||..  ......|.+|.....  =...+.+.| .|..||....
T Consensus       260 ~p~G~C~C~~G~e~~~~~C~aC~~g~~k~--~~~~~~C~~CP~~S~--s~~~Gs~~C-~C~ng~~ra~  322 (536)
T 3fl7_A          260 VPIGQCLCQAGYEKVEDACQACSPGFFKF--EASESPCLECPEHTL--PSPEGATSC-ECEEGFFRAP  322 (536)
T ss_dssp             CCBCCCEECTTEEEETTEEEECCTTEECC--SCCSSCCEECCSSEE--CCCTTCSSC-EECTTCBCCT
T ss_pred             cccCcEeccCccccCCceeeecCCCCCcc--cCCCCccccCCCCCC--CCCCCccEE-EEeccccccC
Confidence            3458999999997  77899999999952  234567888876643  125678999 9999997654

>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}

Probab=94.64  E-value=0.069  Score=49.06  Aligned_cols=41  Identities=39%  Similarity=1.006  Sum_probs=24.5

Q ss_pred             CCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCc
Q psy826          197 INECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQA  258 (329)
Q Consensus       197 ~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~  258 (329)
                      +|||.....|  .+.|.|++|+|.|.                   |++||.+.  +..|....+
T Consensus         1 i~ec~~~~~C--~~~C~n~~g~~~C~-------------------C~~g~~l~~d~~~C~~~~~   43 (349)
T 3v64_C            1 VNECAEEGYC--SQGCTNSEGAFQCW-------------------CEAGYELRPDRRSCKALGP   43 (349)
T ss_dssp             --------CC--SSEECCC---CCEE-------------------CCTTEEECTTSSCEEESSS
T ss_pred             CcccCCCCCC--cCeeecCCCCeEEE-------------------CCCCccCCCCCCccccccc
Confidence            4677633678  56999999999999                   99999975  567887654

>3zyj_B Netrin-G1; cell adhesion, synapse; HET: NAG BMA MAN; 3.25A {Homo sapiens}

Probab=94.54  E-value=0.02  Score=54.21  Aligned_cols=80  Identities=14%  Similarity=0.301  Sum_probs=24.2

Q ss_pred             CcCCCCCCCCCCccCCCCC--CCCCCCCcccCCCCCCCCceee-cCCCCCCCCCCcCCCCccccccCcCCCCCcCCcccc
Q psy826           91 RCCPVDHYGADCKPCLGFP--NVCFGNGKCKGNGTRKGNGQCV-CNKEYTGELCNECNTGYFQSYKDEKTILCSKCHASC  167 (329)
Q Consensus        91 ~~C~~G~~G~~C~~C~~~~--~~C~~~~~C~~~~~~~gs~~C~-C~~G~~g~~C~~C~~g~y~~~~~~~~~~C~~C~~~C  167 (329)
                      +.|+.|+.|+.|+.|.++.  .++..+..|..+  ....+.|. |.-++.|..|+.   .         .   .+|..+ 
T Consensus       315 C~C~~~ttG~~CE~C~pgy~~~P~~~gt~~p~~--~g~~~~C~pC~Cn~~g~~CD~---~---------t---~~C~ng-  376 (426)
T 3zyj_B          315 CECEHNTTGPDCGKCKKNYQGRPWSPGSYLPIP--KGAANACIPSISSIGTNVCDN---E---------L---LHCQNG-  376 (426)
T ss_dssp             ECCCTTEESSSSCEECTTCCSSCCCCCBCCSSS--SCBCCCCCCCCC---------------------------------
T ss_pred             eeCCCCCcCCCccccccccccCcccCCcccccC--CCCCCcccCCCCCCCcCcccc---C---------c---ccCCCC-
Confidence            3499999999999997643  456543322110  12345564 444445555531   1         1   245544 


Q ss_pred             cCCcccCCCCCCccCCCCceecCCC
Q psy826          168 ESGCSTGGPKGCTKCKSGWAADKDI  192 (329)
Q Consensus       168 ~~~C~~~~~~~C~~C~~G~~~~~~~  192 (329)
                       ++|....  .| .|++||.|....
T Consensus       377 -g~C~~~~--~C-~C~~G~~G~~Ce  397 (426)
T 3zyj_B          377 -GTCHNNV--RC-LCPAAYTGILCE  397 (426)
T ss_dssp             -------------------------
T ss_pred             -CCcCCCC--CC-cCCCCCcCCCCc
Confidence             4676332  99 999999997643

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=94.11  E-value=0.037  Score=37.25  Aligned_cols=45  Identities=20%  Similarity=0.524  Sum_probs=30.7

Q ss_pred             cccccCCcc-cC-CCCCCccCCCCceecCCC-CcccCCCCCCCCCCCCCceeecC
Q psy826          164 HASCESGCS-TG-GPKGCTKCKSGWAADKDI-GCYDINECSDENICSGNQFCVNT  215 (329)
Q Consensus       164 ~~~C~~~C~-~~-~~~~C~~C~~G~~~~~~~-~C~d~~eC~~~~~C~~~~~C~n~  215 (329)
                      ++.|.+.|. .+ +++.| .|++||.+..++ .|.|+++    .+|  ++.|+|.
T Consensus         6 nggC~~~C~n~~~gs~~C-~C~~Gy~L~~D~~tC~d~~~----~pC--~~~c~n~   53 (59)
T 2wph_E            6 NGRCEQFCKNSADNKVVC-SCTEGYRLAENQKSCEPAVP----FPC--GRVSVSQ   53 (59)
T ss_dssp             GGGCSSEEEECSTTCEEE-ECCTTEEECTTSSCEEESSS----SCT--TCCCSCC
T ss_pred             CCCcCCEeEeCCCCCEEe-eCCCCcEECCCCCcccCCCC----CCC--CCccccc
Confidence            345656776 56 58999 999999997654 5888653    345  3455554

>2wph_E Coagulation factor IXA light chain; serine protease, zymogen, hydrolase, glycoprotein, hydroxylation, phosphoprotein, sulfation, hemostasis; HET: DPN 1PE; 1.50A {Homo sapiens} PDB: 2wpi_E* 2wpj_E* 2wpk_E* 2wpl_E* 2wpm_E 3kcg_L* 3lc3_B* 1rfn_B* 3lc5_B*

Probab=94.07  E-value=0.021  Score=38.53  Aligned_cols=34  Identities=38%  Similarity=0.865  Sum_probs=27.0

Q ss_pred             CCCCCCceeecCC-CCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCc
Q psy826          204 NICSGNQFCVNTE-GSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQA  258 (329)
Q Consensus       204 ~~C~~~~~C~n~~-gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~  258 (329)
                      ..|  .+.|+|++ |+|.|.                   |++||.+.  +..|+++.+
T Consensus         7 ggC--~~~C~n~~~gs~~C~-------------------C~~Gy~L~~D~~tC~d~~~   43 (59)
T 2wph_E            7 GRC--EQFCKNSADNKVVCS-------------------CTEGYRLAENQKSCEPAVP   43 (59)
T ss_dssp             GGC--SSEEEECSTTCEEEE-------------------CCTTEEECTTSSCEEESSS
T ss_pred             CCc--CCEeEeCCCCCEEee-------------------CCCCcEECCCCCcccCCCC
Confidence            356  45899999 699999                   99999975  567988654

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=94.01  E-value=0.058  Score=56.14  Aligned_cols=82  Identities=27%  Similarity=0.726  Sum_probs=48.7

Q ss_pred             CCCcCCcccccCCcccCCCCC-CccCCCCceecCCCCcccCCCCCCCCCCCCCce------eecCCCCcccCCCcCCCCC
Q psy826          158 ILCSKCHASCESGCSTGGPKG-CTKCKSGWAADKDIGCYDINECSDENICSGNQF------CVNTEGSYRCMQCDPSCNG  230 (329)
Q Consensus       158 ~~C~~C~~~C~~~C~~~~~~~-C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~------C~n~~gs~~C~~C~~~C~~  230 (329)
                      ..|  ||..|.+.|.+++... |..|..-+.   .+.|+      .  .|+.+.+      |+.   ...|..|+..|..
T Consensus       205 ~~C--Ch~~C~ggC~gp~~~~~C~~C~~~~~---~~~Cv------~--~Cp~~~y~~~~~~C~~---~~~C~~~~~~c~~  268 (897)
T 2dtg_E          205 GLC--CHSECLGNCSQPDDPTKCVACRNFYL---DGRCV------E--TCPPPYYHFQDWRCVN---FSFCQDLHHKCKN  268 (897)
T ss_dssp             SCB--CCTTCCSEESSSSCGGGEECCSSCBB---TTBCC------S--SCCSSCCCCTTSBCCC---HHHHHHHSSCCCS
T ss_pred             CCc--cChhhCcCCCCCCCCCceeECccCcc---CCcch------h--hcCCceeEecCcEEcC---hhHhhccCccccC
Confidence            456  9999988999888878 999986443   23443      3  6665443      221   2246667777766


Q ss_pred             CcCC-------cccccc-cCccccccc--CCcccc
Q psy826          231 CHGD-------GPDMCE-ACAEGYKLQ--QNICIN  255 (329)
Q Consensus       231 C~g~-------~~~~C~-~C~~Gy~~~--~~~C~~  255 (329)
                      |.+.       ....|+ .|+.||..+  ...|+.
T Consensus       269 ~~~~~c~~~~~~~~~Cv~~CP~g~~~~~~~~~C~~  303 (897)
T 2dtg_E          269 SRRQGCHQYVIHNNKCIPECPSGYTMNSSNLLCTP  303 (897)
T ss_dssp             TTTTSCCCCEEETTEEESSCCSSCEECSSSCBEEC
T ss_pred             CCcccccceeeECCEEccCCCCCccccCCCCeecc
Confidence            5431       223343 488887764  234543

>3ltf_D Protein spitz; receptor-ligand complex ectodomain cysteine rich domain EGF ATP-binding, kinase, nucleotide-binding, receptor; HET: NAG MAN; 3.20A {Drosophila melanogaster}

Probab=93.84  E-value=0.013  Score=39.44  Aligned_cols=32  Identities=19%  Similarity=0.553  Sum_probs=24.2

Q ss_pred             CCCCCCcccCCC-CCCCCceeecCCCCCCCCCC
Q psy826          111 VCFGNGKCKGNG-TRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       111 ~C~~~~~C~~~~-~~~gs~~C~C~~G~~g~~C~  142 (329)
                      +|.++|+|.... ...+.+.|.|.+||+|..|+
T Consensus        15 pC~NGGtC~~~~~~~~~~~~C~C~~Gf~G~~Ce   47 (58)
T 3ltf_D           15 YCLNDAHCFAVKIADLPVYSCECAIGFMGQRCE   47 (58)
T ss_dssp             TSCSSCEEEEEEETTEEEEEEEECTTEESSSSC
T ss_pred             cCCCCCEEeCCccCCCCCEEeECCCCCccCCCc
Confidence            799999997310 01346899999999999994

>1ob1_C Major merozoite surface protein; immune system, immunoglobulin/complex, immunoglobulin, antib fragment, MSP1-19, EGF-like domain; 2.90A {Plasmodium falciparum} SCOP: g.3.11.4 g.3.11.4 PDB: 1cej_A 2flg_A

Probab=93.65  E-value=0.025  Score=42.12  Aligned_cols=48  Identities=17%  Similarity=0.522  Sum_probs=39.0

Q ss_pred             cCCCCCCccCCCCceecCCCCcccC--CCCCCC-CCCCCCceeecCC-----CCcccC
Q psy826          173 TGGPKGCTKCKSGWAADKDIGCYDI--NECSDE-NICSGNQFCVNTE-----GSYRCM  222 (329)
Q Consensus       173 ~~~~~~C~~C~~G~~~~~~~~C~d~--~eC~~~-~~C~~~~~C~n~~-----gs~~C~  222 (329)
                      .++...| .|.+||.++. ..|+.+  +.|... ..|.+++.|..+.     +...|.
T Consensus        22 ~~g~e~C-~C~~gy~gdg-~~Cv~~~~~sC~~nNGGCd~nA~C~~~~~~~~~~ki~C~   77 (99)
T 1ob1_C           22 LDEREEC-KCLLNYKQEG-DKCVENPNPTCNENNGGCDADAKCTEEDSGSNGKKITCE   77 (99)
T ss_dssp             TTSCCEE-EECTTEEEET-TEEEECSCCCSTTGGGGCCTTEEEECCSCSSSSCCCEEE
T ss_pred             CCCCEEE-EecCCeecCC-CeEeeCCCCChhhcCCCcCCCceeEecCCcccCCceEeE
Confidence            4678899 9999999976 679877  478875 6799999999875     457787

>1a3p_A Epidermal growth factor; disulfide connectivities, EGF-like domain, repeat; HET: ABA; NMR {Mus musculus} SCOP: g.3.11.1

Probab=93.50  E-value=0.043  Score=34.62  Aligned_cols=29  Identities=28%  Similarity=0.643  Sum_probs=24.2

Q ss_pred             CCCCCceee--cCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCccc
Q psy826          205 ICSGNQFCV--NTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICI  254 (329)
Q Consensus       205 ~C~~~~~C~--n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~  254 (329)
                      +|.++..|+  +..++|.|.                   |++||.|.  .|.
T Consensus        10 pC~ngg~C~~~~~~~~~~C~-------------------C~~G~~G~--~Ce   40 (45)
T 1a3p_A           10 YCLNGGVXMHIESLDSYTCN-------------------CVIGYSGD--RCQ   40 (45)
T ss_dssp             CCSSSCEEEECTTTSSEEEE-------------------CCTTEETT--TTC
T ss_pred             CCCCCCEEEeecCCCCEEEE-------------------cCCCCcCC--cCC
Confidence            788888998  677899999                   99999875  553

>1szb_A Mannose binding lectin-associated serine protease-2 related protein, MAP19 (19KDA)...; calcium, complement, innate immunity, CUB, EGF; 2.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=93.40  E-value=0.023  Score=46.74  Aligned_cols=50  Identities=32%  Similarity=0.750  Sum_probs=37.8

Q ss_pred             CCceecCCCCcccCCCCCCC-CC---CCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCccccc
Q psy826          184 SGWAADKDIGCYDINECSDE-NI---CSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINT  256 (329)
Q Consensus       184 ~G~~~~~~~~C~d~~eC~~~-~~---C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~  256 (329)
                      .||.+.  ..+.++++|... ..   |.  +.|.|+.|+|.|.                   |++||.+.  +..|+++
T Consensus       113 ~Gf~~~--~~~~di~eC~~~~~~~~~C~--~~C~n~~g~~~C~-------------------C~~Gy~l~~d~~~C~~~  168 (170)
T 1szb_A          113 TGFEAF--YAAEDIDECQVAPGEAPTCD--HHCHNHLGGFYCS-------------------CRAGYVLHRNKRTCSEQ  168 (170)
T ss_dssp             CEEEEE--EEEEECCTTCCCTTSCCSSS--SEEEEETTEEEEE-------------------CCTTEEECTTSSCEEEC
T ss_pred             cCceee--eeccccCcccCCCCCCCccC--CccccCCCCEEEe-------------------CCCCcEECCCCCccccc
Confidence            677664  246789999875 22   85  3799999999999                   99999964  5567664

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=93.16  E-value=0.019  Score=46.74  Aligned_cols=31  Identities=29%  Similarity=0.678  Sum_probs=26.9

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ..+|.+++.|.+   ..+++.|.|.+||.|..|+
T Consensus       124 ~~~C~~~g~C~~---~~~~~~c~C~~g~~G~~Ce  154 (162)
T 1g1s_A          124 DMSCSKQGECLE---TIGNYTCSCYPGFYGPECE  154 (162)
T ss_dssp             TTGGGGSEEEEE---CSSSEEEEECTTEESTTSC
T ss_pred             CCCCCCCCEEec---CCCCceEeCCCCCcCcccc
Confidence            357888899998   7889999999999999883

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=92.99  E-value=0.038  Score=41.43  Aligned_cols=48  Identities=17%  Similarity=0.430  Sum_probs=39.6

Q ss_pred             cCCCCCCccCCCCceecCCCCcccCCC-CCCC-CCCCCCceeecCC-CCcccC
Q psy826          173 TGGPKGCTKCKSGWAADKDIGCYDINE-CSDE-NICSGNQFCVNTE-GSYRCM  222 (329)
Q Consensus       173 ~~~~~~C~~C~~G~~~~~~~~C~d~~e-C~~~-~~C~~~~~C~n~~-gs~~C~  222 (329)
                      .++...| .|..||.++. ..|+.++. |... +.|..++.|..+. ..-.|.
T Consensus        28 ~~G~e~C-rCl~gY~~dg-~~Cv~~Np~C~~nNGGCd~nAeC~~~~~~ki~C~   78 (105)
T 1n1i_A           28 LDGTEEW-RCLLGFKEVG-GKCVPASITCEENNGGCAPEAECTMDDKKEVECK   78 (105)
T ss_dssp             TTSCEEE-EECTTEEECS-SSEEECCCCTTSGGGGSCTTSEEEECTTSCEEEE
T ss_pred             CCCCEeE-EEECCeeccC-CEEEECCcchhhcCCCcCCCcEeEECCCCEEEeE
Confidence            5677899 9999999976 77998888 7665 7799999999875 667787

>2dtg_E Insulin receptor; IR ectodomain, X-RAY crystallography, hormone receptor/immune system complex; 3.80A {Homo sapiens} SCOP: b.1.2.1 b.1.2.1 b.1.2.1 c.10.2.5 c.10.2.5 g.3.9.1 PDB: 3loh_E

Probab=92.72  E-value=0.17  Score=52.55  Aligned_cols=90  Identities=21%  Similarity=0.558  Sum_probs=51.1

Q ss_pred             CCCce-ee-cCCCCCCCCC-CcCCCCccccccCcCC--CCCcCCcccccCCcccCCCCCCccCCCCceecCCCCcccCCC
Q psy826          125 KGNGQ-CV-CNKEYTGELC-NECNTGYFQSYKDEKT--ILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINE  199 (329)
Q Consensus       125 ~gs~~-C~-C~~G~~g~~C-~~C~~g~y~~~~~~~~--~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~e  199 (329)
                      ++... |. |..-+.+..| +.|+.++|......+.  ..|..|+..|. .|.   .   ..| ..|.... +      .
T Consensus       219 p~~~~~C~~C~~~~~~~~Cv~~Cp~~~y~~~~~~C~~~~~C~~~~~~c~-~~~---~---~~c-~~~~~~~-~------~  283 (897)
T 2dtg_E          219 PDDPTKCVACRNFYLDGRCVETCPPPYYHFQDWRCVNFSFCQDLHHKCK-NSR---R---QGC-HQYVIHN-N------K  283 (897)
T ss_dssp             SSCGGGEECCSSCBBTTBCCSSCCSSCCCCTTSBCCCHHHHHHHSSCCC-STT---T---TSC-CCCEEET-T------E
T ss_pred             CCCCCceeECccCccCCcchhhcCCceeEecCcEEcChhHhhccCcccc-CCC---c---ccc-cceeeEC-C------E
Confidence            44455 85 8776668889 8999999842111111  12444555444 222   1   244 3444332 3      3


Q ss_pred             CCCCCCCCCCceeecCCCCcccCCCcCCC-CCCcC
Q psy826          200 CSDENICSGNQFCVNTEGSYRCMQCDPSC-NGCHG  233 (329)
Q Consensus       200 C~~~~~C~~~~~C~n~~gs~~C~~C~~~C-~~C~g  233 (329)
                      |..  .|+.+.+ .+ ..+..|.+|+..| +.|.+
T Consensus       284 Cv~--~CP~g~~-~~-~~~~~C~~C~~~C~k~C~~  314 (897)
T 2dtg_E          284 CIP--ECPSGYT-MN-SSNLLCTPCLGPCPKVCHL  314 (897)
T ss_dssp             EES--SCCSSCE-EC-SSSCBEECCCSSCCCEECC
T ss_pred             Ecc--CCCCCcc-cc-CCCCeeccCCCCCCCCccc
Confidence            443  7887765 22 2456899999988 57853

>1hae_A Heregulin-alpha; growth factor; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1haf_A 1hre_A 1hrf_A

Probab=92.18  E-value=0.043  Score=37.32  Aligned_cols=41  Identities=24%  Similarity=0.537  Sum_probs=30.0

Q ss_pred             CCCCCCCCCCCCceeec-----CCCCcccCCCcCCCCCCcCCcccccccCcccccccCCccc-ccCcCC
Q psy826          198 NECSDENICSGNQFCVN-----TEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICI-NTQAKS  260 (329)
Q Consensus       198 ~eC~~~~~C~~~~~C~n-----~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~-~~~~~~  260 (329)
                      ++|.. .+|.++..|++     ..++|.|.                   |++||.|.  .|. +++++.
T Consensus         7 ~~C~~-~pC~ngG~C~~~~~~~~~~~y~C~-------------------C~~Gf~G~--~Ce~~i~~~~   53 (63)
T 1hae_A            7 AEKEK-TFCVNGGECFMVKDLSNPSRYLCK-------------------CQPGFTGA--RCTENVPMKV   53 (63)
T ss_dssp             CHHHH-TTSCTTCEEEEEESSSSSCCEEEE-------------------CCTTEEST--TSCEECCSSC
T ss_pred             CCCCC-CcCCCCcEEecCCccCCCCCEEEE-------------------CCCCCcCC--ccCcCcCccc
Confidence            44544 58888899986     56889999                   99999875  674 455443

>1k36_A Epiregulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1k37_A

Probab=92.10  E-value=0.042  Score=34.97  Aligned_cols=34  Identities=26%  Similarity=0.614  Sum_probs=26.0

Q ss_pred             cCCCCCCC--CCCCCCceeecCC--CCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          196 DINECSDE--NICSGNQFCVNTE--GSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       196 d~~eC~~~--~~C~~~~~C~n~~--gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      ++++|...  .+|.+ ..|....  ++|.|.                   |++||.|.
T Consensus         2 ~i~~C~~~~~~pC~n-G~C~~~~~~~~~~C~-------------------C~~GytG~   39 (46)
T 1k36_A            2 SITKCSSDMNGYCLH-GQCIYLVDMSQNYCR-------------------CEVGYTGV   39 (46)
T ss_dssp             CEECCCTTCCSSCSS-EEEEEETTTTEEEEE-------------------ECTTCSST
T ss_pred             ccccCCCCCCCCCCC-CEeeccCCCCCEEEE-------------------CCCCCccC
Confidence            45677653  68887 6898644  689999                   99999886

>3urf_Z Tumor necrosis factor receptor superfamily member; cystein-rich domain, beta-sandwich, cytokine; HET: NAG; 2.70A {Homo sapiens} PDB: 4e4d_R

Probab=91.82  E-value=0.52  Score=38.84  Aligned_cols=98  Identities=19%  Similarity=0.472  Sum_probs=51.8

Q ss_pred             CCCcCCCCccccccCcCCCCCcCCccccc------CCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceee
Q psy826          140 LCNECNTGYFQSYKDEKTILCSKCHASCE------SGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCV  213 (329)
Q Consensus       140 ~C~~C~~g~y~~~~~~~~~~C~~C~~~C~------~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~  213 (329)
                      .|..|++|+|....+ ....|.+|...|.      ..|+......| .|.+||+... ..|...      ..|++++.=.
T Consensus        40 ~C~~C~~gty~~~~n-~~~~C~~C~~~C~~~~~~~~~CT~tsdtvC-~C~~G~~~~~-~~C~~c------t~C~~G~~v~  110 (171)
T 3urf_Z           40 VCAPCPDHYYTDSWH-TSDECLYCSPVCKELQYVKQECNRTHNRVC-ECKEGRYLEI-EFCLKH------RSCPPGFGVV  110 (171)
T ss_dssp             EEEECCTTEECCSCB-CCSSCEECCCCCCTTEEEEECCCSSSCCEE-EECTTEEEET-TEEEEC------CCBCTTEEEE
T ss_pred             ccccCCCCcEecCCC-CCCccccCcCccCCCCEEeccCcCCCCccc-cCCCCcEECC-ccCccc------CcCCCCceEe
Confidence            456777887743322 1345666554342      13554455789 8999998753 334432      2455444311


Q ss_pred             cCCCCcccCCCcCCCCCCcCCcccccccCcccccccC----CcccccCcCCC
Q psy826          214 NTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQ----NICINTQAKSQ  261 (329)
Q Consensus       214 n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~----~~C~~~~~~~~  261 (329)
                      . .              |+......|..|++|++.+.    ..|.+...+..
T Consensus       111 ~-~--------------~t~~~dt~C~~C~~Gtfs~~~ss~~~C~p~T~C~~  147 (171)
T 3urf_Z          111 Q-A--------------GTPERNTVCKRCPDGFFSNETSSKAPCRKHTNCSV  147 (171)
T ss_dssp             E-C--------------CCSSSCCEEEECCTTEECSSCBSSCCCEECCCCSS
T ss_pred             e-c--------------CccCCCcccccCCCCcccCCCCCCCccccCCccCC
Confidence            1 1              11122334556888887653    34666555543

>1apq_A Complement protease C1R; EGF, calcium binding, serine protease; NMR {Homo sapiens} SCOP: g.3.11.1

Probab=90.35  E-value=0.076  Score=34.44  Aligned_cols=22  Identities=27%  Similarity=0.632  Sum_probs=18.2

Q ss_pred             CCcc-cCCCCCCccCCCCceecCC
Q psy826          169 SGCS-TGGPKGCTKCKSGWAADKD  191 (329)
Q Consensus       169 ~~C~-~~~~~~C~~C~~G~~~~~~  191 (329)
                      +.|. .+++|.| .|++||.+..+
T Consensus        24 ~~C~n~~Gsy~C-~C~~Gy~~~~d   46 (53)
T 1apq_A           24 HLCHNYVGGYFC-SCRPGYELQED   46 (53)
T ss_dssp             SEEEEETTEEEE-ECSTTCEECTT
T ss_pred             CEeECCCCCeEE-ECCCCCeECCC
Confidence            4566 7889999 99999998764

>3e50_C Protransforming growth factor alpha; IDE, TGF-alpha, cytoplasm, hydrolase, metal-binding, metalloprotease, polymorphism, protease, zinc; 2.30A {Homo sapiens} SCOP: g.3.11.1 PDB: 1yuf_A 1yug_A 2tgf_A 1mox_C 3tgf_A 4tgf_A

Probab=90.10  E-value=0.19  Score=32.53  Aligned_cols=32  Identities=28%  Similarity=0.776  Sum_probs=23.6

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .+.|.++ +|.... ..+...|.|.+||+|..|+
T Consensus        13 ~~yC~nG-~C~~~~-~~~~~~C~C~~gy~G~RCe   44 (50)
T 3e50_C           13 TQFCFHG-TCRFLV-QEDKPACVCHSGYVGARCE   44 (50)
T ss_pred             cCcccCC-EEeecc-CCCCeEEECCCCCcccCCC
Confidence            3567754 897422 2466899999999999885

>1iox_A Betacellulin; EGF-like fold, hormone/growth factor complex; NMR {Homo sapiens} SCOP: g.3.11.1 PDB: 1ip0_A

Probab=89.74  E-value=0.12  Score=33.42  Aligned_cols=31  Identities=29%  Similarity=0.817  Sum_probs=23.0

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      +.|.+ |+|.-.. ..+...|.|++||+|..|+
T Consensus        14 ~yC~n-G~C~~~~-~~~~~~C~C~~gy~G~RCe   44 (50)
T 1iox_A           14 HYCIK-GRCRFVV-AEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             TSCTT-CCEEEET-TTTEEEECCCTTEETTTTC
T ss_pred             CcccC-CEEEeEc-CCCCeEEECCCCcccCCCC
Confidence            56776 7896211 3556789999999999985

>1gl4_A Nidogen-1, entactin; immunoglobulin-like domain, extracellular matrix; HET: EPE; 2.0A {Mus musculus} SCOP: d.22.1.2 g.3.11.5 PDB: 1h4u_A

Probab=89.73  E-value=0.034  Score=49.65  Aligned_cols=35  Identities=26%  Similarity=0.620  Sum_probs=28.4

Q ss_pred             cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCC--CCCC
Q psy826          104 PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYT--GELC  141 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~--g~~C  141 (329)
                      +|..+.++|..++.|.|   +.|+|.|.|++||.  |..|
T Consensus         7 EC~~~~~~C~~~a~C~N---t~Gsy~C~C~~Gy~GnG~~C   43 (285)
T 1gl4_A            7 TCANNRHQCSVHAECRD---YATGFCCRCVANYTGNGRQC   43 (285)
T ss_dssp             CHHHHGGGSCTTEEEEE---CSSCEEEEECTTEEECSSSE
T ss_pred             hccCCCCCCCCCCEeEc---CCCCeEEEcCCCCCCCCCcC
Confidence            45444567988899999   99999999999998  4456

>3ca7_A Protein spitz; argos, EGF, developmental protein, differentiation, EGF-like domain, endoplasmic reticulum, glycoprotein, golgi apparatus; 1.50A {Drosophila melanogaster} PDB: 3c9a_C 3ltg_D

Probab=89.68  E-value=0.03  Score=36.60  Aligned_cols=41  Identities=29%  Similarity=0.596  Sum_probs=30.5

Q ss_pred             CCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeec----CCCCcccCCCcCCCCCCcCCcccccccCcccccccCCc
Q psy826          177 KGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVN----TEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNI  252 (329)
Q Consensus       177 ~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n----~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~  252 (329)
                      ..| .|++||..               .+|.++..|++    ..++|.|.                   |++||.|.  +
T Consensus         3 ~~C-~C~~g~~~---------------~pC~NGGtC~~~~~~~~~~y~C~-------------------C~~Gf~G~--~   45 (52)
T 3ca7_A            3 PTY-KCPETFDA---------------WYCLNDAHCFAVKIADLPVYSCE-------------------CAIGFMGQ--R   45 (52)
T ss_dssp             CCB-CCCHHHHH---------------HTSCTTCEEEEEEETTEEEEEEE-------------------CCTTEEST--T
T ss_pred             eee-ECCCCCcC---------------CcCCCCCEEecCccCCCCCEEEE-------------------CCCCCcCC--C
Confidence            467 88888862               26777888986    34678999                   99999986  4


Q ss_pred             cc
Q psy826          253 CI  254 (329)
Q Consensus       253 C~  254 (329)
                      |.
T Consensus        46 Ce   47 (52)
T 3ca7_A           46 CE   47 (52)
T ss_dssp             SC
T ss_pred             Cc
Confidence            53

>3cfw_A L-selectin; EGF, cell adhesion, EGF-like domain, glycoprotein, membrane, sushi, transmembrane; HET: NAG MAN BMA; 2.20A {Homo sapiens}

Probab=89.58  E-value=0.093  Score=42.55  Aligned_cols=30  Identities=33%  Similarity=0.750  Sum_probs=26.3

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .+|.+++.|..   ..+++.|.|.+||.|..|+
T Consensus       125 ~~C~~~g~C~~---~~~~~~c~C~~g~~g~~C~  154 (164)
T 3cfw_A          125 WSCSGHGECVE---IINNYTCNCDVGYYGPQCQ  154 (164)
T ss_dssp             TSSCSSEEEEE---ETTEEEEEECTTCBSSSSC
T ss_pred             CcCCCCCeecc---cCCCceeeeCCCccccccc
Confidence            56888899997   6778999999999999984

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=89.52  E-value=0.21  Score=44.32  Aligned_cols=45  Identities=36%  Similarity=0.853  Sum_probs=33.5

Q ss_pred             cCCCCCCC--CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCcCCC
Q psy826          196 DINECSDE--NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQAKSQ  261 (329)
Q Consensus       196 d~~eC~~~--~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~~~~  261 (329)
                      +.|||...  ..|  .++|.++.++|.|.                   |++||.+.  ...|.+.+++.-
T Consensus         1 ~~~eC~~~~~~~C--~~~C~~~~~~~~C~-------------------C~~G~~l~~d~~sC~p~~~c~C   49 (283)
T 3f1s_B            1 AKNECHPERTDGC--QHFCLPGQESYTCS-------------------CAQGYRLGEDHKQCVPHDQCAC   49 (283)
T ss_dssp             --CCCCSSCSSSC--SSBCCCCTTSCCCB-------------------CCTTEEECTTSSCEEECSTTCT
T ss_pred             CCCccCCCCCCCC--CCEeeCCCCCeEec-------------------CCCCcccCCCCCcccccccccc
Confidence            35678654  567  56899999999999                   99999875  567988665543

>1g1s_A P-selectin; selectin, lectin, EGF, sulphated, SLEX, immune system, membr protein; HET: TYS SIA GAL NAG FUC NGA; 1.90A {Homo sapiens} SCOP: d.169.1.1 g.3.11.1 PDB: 1g1r_A* 1g1q_A* 1fsb_A

Probab=89.18  E-value=0.095  Score=42.40  Aligned_cols=36  Identities=28%  Similarity=0.596  Sum_probs=29.2

Q ss_pred             CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCcccccCcCC
Q psy826          204 NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKS  260 (329)
Q Consensus       204 ~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~~~~~~  260 (329)
                      .+|.++..|.+..++|.|.                   |++||.|.  .|..+++|.
T Consensus       125 ~~C~~~g~C~~~~~~~~c~-------------------C~~g~~G~--~Ce~~~~c~  160 (162)
T 1g1s_A          125 MSCSKQGECLETIGNYTCS-------------------CYPGFYGP--ECEYVRDDD  160 (162)
T ss_dssp             TGGGGSEEEEECSSSEEEE-------------------ECTTEEST--TSCEECC--
T ss_pred             CCCCCCCEEecCCCCceEe-------------------CCCCCcCc--ccccCcccC
Confidence            4677788999999999999                   99999986  688777665

>2ygo_A WIF-1, WNT inhibitory factor 1; signaling protein, WNT signaling pathway, WNT antagonist, MO cancer, glycosaminoglycan; HET: MLY PCF NAG; 1.85A {Homo sapiens} PDB: 2ygp_A*

Probab=88.12  E-value=0.27  Score=40.95  Aligned_cols=27  Identities=26%  Similarity=0.737  Sum_probs=23.1

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .+|.++|.|..      ..+|.|++||.|..|+
T Consensus       153 ~~C~ngG~Cv~------P~~C~C~~Gw~G~~C~  179 (188)
T 2ygo_A          153 GGCRNGGFCNE------RRICECPDGFHGPHCE  179 (188)
T ss_dssp             TCCCTTCEECT------TSCEECCTTCBTTTTC
T ss_pred             CCCCCCCEeCC------CCcccCcCCCCCCCCc
Confidence            45999999985      3689999999999985

>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D

Probab=87.67  E-value=0.48  Score=39.24  Aligned_cols=97  Identities=18%  Similarity=0.491  Sum_probs=50.9

Q ss_pred             CCCcCCCCccccccCcCCCCCcCCccccc------CCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceee
Q psy826          140 LCNECNTGYFQSYKDEKTILCSKCHASCE------SGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCV  213 (329)
Q Consensus       140 ~C~~C~~g~y~~~~~~~~~~C~~C~~~C~------~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~  213 (329)
                      .|..|++|+|....+ ....|.+|...|.      ..|+......| .|.+||+... ..|...      ..|++++.=.
T Consensus        42 ~C~pC~~gtY~~~~n-~~~~C~~C~~~C~~~~~~~~~Ct~tsdtvC-~C~~G~~~~~-~~C~~~------s~C~pG~~v~  112 (176)
T 3k51_B           42 TCGPCPPRHYTQFWN-YLERCRYCNVLCGEREEEARACHATHNRAC-RCRTGFFAHA-GFCLEH------ASCPPGAGVI  112 (176)
T ss_dssp             EEEECCTTEECCSCB-CCSSCEECCCCCCSSEEEEECCBTTBCCEE-EECTTEEEET-TEEEEC------CCCCTTEEEE
T ss_pred             ccccCCCCCeecCCC-CCCcCccccCcCCCCCEEeccCcCCCCcee-eccCCeeECC-Cccccc------ccCCCCcEEe
Confidence            345666776643322 2234555543332      13554455789 9999998763 345432      3555554311


Q ss_pred             cCCCCcccCCCcCCCCCCcCCcccccccCcccccccC----CcccccCcCC
Q psy826          214 NTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQ----NICINTQAKS  260 (329)
Q Consensus       214 n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~----~~C~~~~~~~  260 (329)
                      . .+              +......|..|++|++.+.    ..|++...+.
T Consensus       113 ~-~~--------------t~~~Dt~C~~C~~GtFs~~~s~~~~C~p~t~C~  148 (176)
T 3k51_B          113 A-PG--------------TPSQNTQCQPCPPGTFSASSSSSEQCQPHRNCT  148 (176)
T ss_dssp             E-CC--------------CSSSCCEEEECCTTEECCSCSSSCCCEECCCST
T ss_pred             e-cC--------------cccCCCccccCCCCcccCCCCCCCcccCCCccC
Confidence            1 11              1122334556888887653    3577665554

>1nzi_A Complement C1S component; calcium, innate immunity, modular structure, CUB, EGF, hydrolase; 1.50A {Homo sapiens} SCOP: b.23.1.1 g.3.11.1

Probab=87.55  E-value=0.21  Score=40.17  Aligned_cols=49  Identities=41%  Similarity=0.720  Sum_probs=35.6

Q ss_pred             CCceecCCCCcccCCCCCCC--CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccc
Q psy826          184 SGWAADKDIGCYDINECSDE--NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICIN  255 (329)
Q Consensus       184 ~G~~~~~~~~C~d~~eC~~~--~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~  255 (329)
                      .||...  ..+.++++|...  ..|  .+.|.|..+++.|.                   |.+||.+.  +..|.+
T Consensus       106 ~GF~~~--y~~~d~~eC~~~~~~~C--~~~C~n~~g~~~C~-------------------C~~Gy~l~~~~~~C~~  158 (159)
T 1nzi_A          106 TGFAAY--YVATDINECTDFVDVPC--SHFCNNFIGGYFCS-------------------CPPEYFLHDDMKNCGV  158 (159)
T ss_dssp             CEEEEE--EEEEECCTTTC-CCCCS--SSEEEEETTEEEEE-------------------CCTTCEECTTSSCEEC
T ss_pred             ccceee--eecccCcccCCCCCCCC--CCcccCcCCCEEEe-------------------cCCCcEECCCCCcccc
Confidence            566653  236788899864  467  45899999999999                   99999975  445653

>3p0y_A Epidermal growth factor receptor; beta-sandwich, antigens EGFR, immune system; HET: NAG FUL; 1.80A {Homo sapiens} PDB: 3b2u_A* 3c09_A*

Probab=87.15  E-value=0.23  Score=42.47  Aligned_cols=34  Identities=26%  Similarity=0.778  Sum_probs=20.3

Q ss_pred             CCCcCCC--CCCcCCcccccccCcccccccCCcccccC
Q psy826          222 MQCDPSC--NGCHGDGPDMCEACAEGYKLQQNICINTQ  257 (329)
Q Consensus       222 ~~C~~~C--~~C~g~~~~~C~~C~~Gy~~~~~~C~~~~  257 (329)
                      ..||+.|  .+|.||+|.+|.+|+.  ...++.|+|..
T Consensus       171 ~~C~~~C~~~gCWGpgp~~C~~C~~--~~~~~~cv~~~  206 (214)
T 3p0y_A          171 QVCHALCSPEGCWGPEPRDCVSCRN--VSRGRECVDKG  206 (214)
T ss_dssp             CSCCTTBCTTCBSSSSGGGBSSBC--------------
T ss_pred             CCCCccCCCCCccCcCccccccccC--EeeCCeeecCC
Confidence            5899999  4899999999999994  33457888764

>2fd6_A Urokinase-type plasminogen activator; UPAR, ATF, ATN-615 antibody, FAB, ternary complex, immune SY hydrolase; HET: PGE NAG FUC NDG PG4; 1.90A {Homo sapiens} SCOP: g.3.11.1 g.14.1.1 PDB: 3bt2_A* 3bt1_A* 3u73_A* 1urk_A* 3laq_A* 1kdu_A

Probab=87.04  E-value=0.24  Score=38.45  Aligned_cols=31  Identities=32%  Similarity=0.753  Sum_probs=23.7

Q ss_pred             CCCCCCcccCCCCCCCCc-eeecCCCCCCCCCC
Q psy826          111 VCFGNGKCKGNGTRKGNG-QCVCNKEYTGELCN  142 (329)
Q Consensus       111 ~C~~~~~C~~~~~~~gs~-~C~C~~G~~g~~C~  142 (329)
                      ||.++++|.+.. ...++ .|.|++||+|..|+
T Consensus         2 pC~nggtC~~~~-~~~~~~~C~Cp~g~~G~~Ce   33 (122)
T 2fd6_A            2 DCLNGGTCVSNK-YFSNIHWCNCPKKFGGQHCE   33 (122)
T ss_dssp             CCCSSCEEEECT-TTTTCEEEECCTTEESTTSC
T ss_pred             CCCCcCCcCCCc-ccCCCCCccCCCCCCCcccc
Confidence            588899998511 12456 89999999999985

>2e26_A Reelin, reeler protein; signaling protein; HET: NAG BMA; 2.00A {Mus musculus} PDB: 3a7q_A*

Probab=86.64  E-value=0.091  Score=52.67  Aligned_cols=41  Identities=29%  Similarity=0.761  Sum_probs=35.6

Q ss_pred             cCCCCCCCCCCc---cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826           92 CCPVDHYGADCK---PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus        92 ~C~~G~~G~~C~---~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .|.+||.|.+|.   .||.   .|.++|.|.+       ++|+|.+||.|..|.
T Consensus       521 ~C~~gw~g~dc~i~~~Cp~---~C~ghG~C~~-------G~C~Cd~G~~G~~C~  564 (725)
T 2e26_A          521 DKQQTWAIDNVYIGDGCLD---MCSGHGRCVQ-------GSCVCDEQWGGLYCD  564 (725)
T ss_dssp             CTTCCEEEEEEEEESCSSG---GGGGSEEEET-------TEEEECTTEESTTSC
T ss_pred             ccCCCcccccccccCCCCc---ccCCCcEECC-------CCEeeCCCccCCCcC
Confidence            489999999997   5765   5999999996       799999999999884

>1nql_B Epidermal growth factor; cell surface receptor, tyrosine kinase, glycoprotein, endoso growth factor, auto-inhibition; HET: NAG BMA; 2.80A {Homo sapiens} SCOP: g.3.11.1 PDB: 1ivo_C* 2kv4_A 1jl9_A 1p9j_A 3njp_C*

Probab=85.09  E-value=0.2  Score=32.77  Aligned_cols=30  Identities=27%  Similarity=0.711  Sum_probs=24.2

Q ss_pred             CCCCCCceee--cCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCccc
Q psy826          204 NICSGNQFCV--NTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICI  254 (329)
Q Consensus       204 ~~C~~~~~C~--n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~  254 (329)
                      .+|.++..|+  +..++|.|.                   |++||.|.  +|.
T Consensus        12 ~pC~nGG~C~~~~~~~~~~C~-------------------C~~GytG~--~Ce   43 (53)
T 1nql_B           12 GYCLHDGVCMYIEALDKYACN-------------------CVVGYIGE--RCQ   43 (53)
T ss_dssp             CEECTTCEEEEETTTTEEEEE-------------------ECTTEEST--TSC
T ss_pred             CCCCCCeEEeeecCCCCEEEe-------------------cCCCCcCC--CCC
Confidence            5788888998  667889999                   99999986  453

>2rnl_A Amphiregulin; AR, colorectum cell-derived growth factor, EGF-like domain, CRDGF, cytokine, glycoprotein, membrane, polymorphism, transmembrane; NMR {Homo sapiens}

Probab=85.02  E-value=0.54  Score=30.35  Aligned_cols=31  Identities=39%  Similarity=0.823  Sum_probs=22.7

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      +.|.+ |+|.... ..+...|.|++||+|..|+
T Consensus        18 ~yC~n-G~C~~i~-~~~~~~C~C~~gy~G~RCe   48 (50)
T 2rnl_A           18 NFCIH-GECKYIE-HLEAVTCKCQQEYFGERCG   48 (50)
T ss_dssp             GTCSS-SEEEEET-TTTEEEEECCSSCCSSSCC
T ss_pred             CcCCC-CEEEEec-CCCCeeEECCCCccccccc
Confidence            55774 6997311 3556789999999999885

>1ext_A Tumor necrosis factor receptor; binding protein, cytokine, signalling protein; 1.85A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 1ft4_A* 1ncf_A 1tnr_R

Probab=84.54  E-value=0.44  Score=38.81  Aligned_cols=95  Identities=23%  Similarity=0.700  Sum_probs=48.8

Q ss_pred             CCCcCCCCccccccCcCCCCCcCCccccc--------CCcccCCCCCCccCCCCceecC----CCCcccCCCCCCCCCCC
Q psy826          140 LCNECNTGYFQSYKDEKTILCSKCHASCE--------SGCSTGGPKGCTKCKSGWAADK----DIGCYDINECSDENICS  207 (329)
Q Consensus       140 ~C~~C~~g~y~~~~~~~~~~C~~C~~~C~--------~~C~~~~~~~C~~C~~G~~~~~----~~~C~d~~eC~~~~~C~  207 (329)
                      .|..|++|+|.+..+. ...|.+|. .|.        ..|+......| .|++||+...    ...|..   |   ..|+
T Consensus        41 ~C~~C~~gty~~~~n~-~~~C~~C~-~C~~~~~~~~~~~Ct~t~dt~C-~C~~G~y~~~~~~~~~~C~~---C---~~C~  111 (162)
T 1ext_A           41 DCRECESGSFTASENH-LRHCLSCS-KCRKEMGQVEISSCTVDRDTVC-GCRKNQYRHYWSENLFQCFN---C---SLCL  111 (162)
T ss_dssp             EEEECCTTEECCSSBC-CSSCEECC-CCCGGGTCEEEECCBTTBCCEE-ECCTTEEEEEEETTEEEEEE---C---CCCT
T ss_pred             ccccCCCCccccccCC-CCcccccC-CCCCCCCEEEEecccCCCCCCc-cCCCCceeccCCCCcccccC---C---CcCC
Confidence            4557777777433221 22344432 222        14554445689 9999987542    111321   1   2454


Q ss_pred             CCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCcccccCcCC
Q psy826          208 GNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQAKS  260 (329)
Q Consensus       208 ~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~~~~~~  260 (329)
                      +++.  ..              .|+......|. |++||+.+...|++...+.
T Consensus       112 ~G~v--~~--------------~ct~~~dtvC~-C~~G~ys~~~~C~~ct~C~  147 (162)
T 1ext_A          112 NGTV--HL--------------SCQEKQNTVCT-CHAGFFLRENECVSCSNCK  147 (162)
T ss_dssp             TEEE--EE--------------CCBTTBCCEEE-ECTTEEEETTEEEEGGGCC
T ss_pred             CCEE--ec--------------cccCCCCcccc-CCCCeecCCCcCCCCCCCC
Confidence            4431  11              12223344565 9999988777777665554

>1jma_B Herpesvirus entry mediator; V-type IG molecule and TNFR superfamily, viral protein; HET: NAG; 2.65A {Human herpesvirus 1} SCOP: g.24.1.1 g.24.1.1 PDB: 2aw2_B*

Probab=84.52  E-value=0.33  Score=39.80  Aligned_cols=50  Identities=20%  Similarity=0.515  Sum_probs=26.5

Q ss_pred             CCCCcCCCCccccccCcCCCCCcCC---cc--c--ccCCcccCCCCCCccCCCCceecC
Q psy826          139 ELCNECNTGYFQSYKDEKTILCSKC---HA--S--CESGCSTGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       139 ~~C~~C~~g~y~~~~~~~~~~C~~C---~~--~--C~~~C~~~~~~~C~~C~~G~~~~~  190 (329)
                      ..|..|++|+|.+..+ ....|.+|   ..  +  -+..|.......| .|++||+...
T Consensus        35 t~C~~Cp~GtY~~~~n-~~~~C~~C~~C~~~~g~~~~~~Ct~t~~t~C-~C~~G~y~~~   91 (167)
T 1jma_B           35 TVCEPCPPGTYIAHLN-GLSKCLQCQMCDPAMGLRASRNCSRTENAVC-GCSPGHFCIV   91 (167)
T ss_dssp             CEEEECCTTEECSSCB-CSSCCEECCCCCTTTTEEEEECCCSSSCCEE-EECTTEEEEE
T ss_pred             CcCCcCCCCccccccC-cCccccCCcccccCCCeEEeccCCCCCCCcc-cCCCCceecC
Confidence            3556777777743221 12344444   22  1  0012444455789 9999998653

>3qd6_R CD40L receptor, tumor necrosis factor receptor superfamily member; immune regulator, cytokine-cytokine receptor compl; HET: NAG; 3.50A {Homo sapiens}

Probab=84.00  E-value=1.6  Score=36.05  Aligned_cols=50  Identities=18%  Similarity=0.530  Sum_probs=27.4

Q ss_pred             CCCCcCCCCccccccCcCCCCCcC---Ccccc----cCCcccCCCCCCccCCCCceecC
Q psy826          139 ELCNECNTGYFQSYKDEKTILCSK---CHASC----ESGCSTGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       139 ~~C~~C~~g~y~~~~~~~~~~C~~---C~~~C----~~~C~~~~~~~C~~C~~G~~~~~  190 (329)
                      ..|..|++|+|....+. ...|.+   |...-    ...|+......| .|.+||+...
T Consensus        37 t~C~pC~~gty~~~~n~-~~~C~~C~~C~~~~g~~~~~~Ct~t~d~~C-~C~~G~~~~~   93 (177)
T 3qd6_R           37 TECLPCGESEFLDTWNR-ETHCHQHKYCDPNLGLRVQQKGTSETDTIC-TCEEGWHCTS   93 (177)
T ss_dssp             CBCCBCCSSEECCSSBC-CSSCEECCCCCGGGTEEEEECCCTTSCCEE-EECTTEEESS
T ss_pred             CccccCCCCceecCCCC-CCcCCCCCcCCCcCCeEEecCCcCCCCcee-ecCCCcEECC
Confidence            35667888877543322 233443   32210    013554445789 7999998753

>1xdt_R Hbegf, heparin-binding epidermal growth factor; complex (toxin-growth factor), diphtheria toxin, receptor, H binding epidermal growth factor; 2.65A {Homo sapiens} SCOP: g.3.11.1

Probab=83.90  E-value=0.41  Score=34.08  Aligned_cols=37  Identities=35%  Similarity=0.944  Sum_probs=25.1

Q ss_pred             cCCC-CCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          104 PCLG-FPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       104 ~C~~-~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      +|+. ..+.|.+ |.|.... ..+.+.|.|.+||+|..|+
T Consensus        39 pC~~~~~~yCln-G~C~~i~-~~~~~~C~C~~GYtG~RCE   76 (79)
T 1xdt_R           39 PCLRKYKDFCIH-GECKYVK-ELRAPSCICHPGYHGERCH   76 (79)
T ss_dssp             CTTTTTTTCCSS-EEECCBG-GGTBCCEEECTTEESTTCC
T ss_pred             CCCccccCcCCC-CEeeeec-CCCCeEEEcCCCccccccc
Confidence            4543 2356875 4896321 2456789999999999885

>2hr7_A Insulin receptor; hormone receptor, leucine rich repeat, transferase; HET: NAG BMA MAN FUC P33; 2.32A {Homo sapiens}

Probab=83.70  E-value=0.67  Score=44.70  Aligned_cols=37  Identities=24%  Similarity=0.599  Sum_probs=26.8

Q ss_pred             CcccCCCcCCCC-CCcCCcccc-cccCcccccccCCcccccCc
Q psy826          218 SYRCMQCDPSCN-GCHGDGPDM-CEACAEGYKLQQNICINTQA  258 (329)
Q Consensus       218 s~~C~~C~~~C~-~C~g~~~~~-C~~C~~Gy~~~~~~C~~~~~  258 (329)
                      ...|  ||+.|. +|+||++.+ |.+|+.-  ..++.|++.++
T Consensus       204 ~~~C--Ch~~C~ggC~GP~~~~~ClsC~~~--~~~g~Cv~~CP  242 (486)
T 2hr7_A          204 EGLC--CHSECLGNCSQPDDPTKCVACRNF--YLDGRCVETCP  242 (486)
T ss_dssp             TCCB--CCTTBCSCBSSSSCTTSBSSBSSE--EETTEEESSCC
T ss_pred             CCCc--cCcccccCCCCCCCCCccccCccc--cCCCccccccC
Confidence            4567  999995 999999999 9998742  22445655443

>1sg1_X Tumor necrosis factor receptor superfamily member 16; nerve growth factor, NGF, neurotrophin, common neurotrophin receptor; 2.40A {Rattus norvegicus} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 g.24.1.1 PDB: 3buk_C* 3ij2_X

Probab=83.15  E-value=3.2  Score=33.39  Aligned_cols=51  Identities=24%  Similarity=0.615  Sum_probs=30.0

Q ss_pred             CCCCCCCcCCCC-ccccccCcCCCCCcCCccccc------CCcccCCCCCCccCCCCceec
Q psy826          136 YTGELCNECNTG-YFQSYKDEKTILCSKCHASCE------SGCSTGGPKGCTKCKSGWAAD  189 (329)
Q Consensus       136 ~~g~~C~~C~~g-~y~~~~~~~~~~C~~C~~~C~------~~C~~~~~~~C~~C~~G~~~~  189 (329)
                      .....|..|++| +|....+ ....|.+|. .|.      ..|+......| .|.+||+.+
T Consensus        31 ~~~t~C~~C~~g~ty~~~~~-~~~~C~~C~-~C~~~~~~~~~Ct~t~d~~C-~C~~G~y~~   88 (161)
T 1sg1_X           31 ANQTVCEPCLDNVTFSDVVS-ATEPCKPCT-ECLGLQSMSAPCVEADDAVC-RCAYGYYQD   88 (161)
T ss_dssp             SSSCEEEECCTTTEECCSCB-SSCCCEECC-CCCTTEEEEECCBTTBCCEE-EECTTEEEC
T ss_pred             CCCCcCcCCcCCCccccCCC-CCCcCcCCC-CCCCcceeecCCCcccCcee-ccCCCeEeC
Confidence            345688999998 7753322 123455543 121      23443445788 789998874

>3nt1_A Prostaglandin-endoperoxide synthase 2; prostaglandin H2 synthase, cyclooxygenase-2, naproxen, oxido; HET: NAG BOG NPS HEM; 1.73A {Mus musculus} PDB: 3ln1_A* 3mqe_A* 3ln0_A* 3ntb_A* 3q7d_A* 4fm5_A* 1pxx_A* 3pgh_A* 1cx2_A* 4cox_A* 5cox_A* 6cox_A* 3qh0_A* 3qmo_A* 4e1g_A* 3olu_A* 3olt_A* 3hs5_A* 3hs6_A* 3hs7_A* ...

Probab=82.96  E-value=0.37  Score=47.51  Aligned_cols=32  Identities=28%  Similarity=0.699  Sum_probs=26.6

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecC-CCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCN-KEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~-~G~~g~~C~  142 (329)
                      ++||.++|+|.+.  ..++|.|.|. +||+|..|+
T Consensus         6 s~PC~ngG~C~~~--~~~~y~C~C~~~G~~G~~Ce   38 (587)
T 3nt1_A            6 SNPCQNRGECMST--GFDQYKCDCTRTGFYGENCT   38 (587)
T ss_dssp             TCCCCTTCEEEEE--ETTEEEEECTTSSEETTTTC
T ss_pred             CCCCCCCCEeeCC--CCCCeEEecCCCCccCCCCC
Confidence            4689999999941  2367999999 999999995

>3me4_A Tumor necrosis factor receptor superfamily member; RANK, rankl, rankl-RANK complex, tnfsf11, tnfrsf11A, TNF SUP signaling protein; 2.01A {Mus musculus} PDB: 3me2_R 3qbq_B 4giq_R* 3nzy_B

Probab=82.85  E-value=1  Score=38.48  Aligned_cols=20  Identities=20%  Similarity=0.635  Sum_probs=13.7

Q ss_pred             CcccCCCCCCccCCCCceecC
Q psy826          170 GCSTGGPKGCTKCKSGWAADK  190 (329)
Q Consensus       170 ~C~~~~~~~C~~C~~G~~~~~  190 (329)
                      .|+......| .|.+||+...
T Consensus       102 ~Ct~t~dtvC-~C~~G~y~~~  121 (216)
T 3me4_A          102 PGNHTAPRRC-ACTAGYHWNS  121 (216)
T ss_dssp             TTCSSSCCEE-EECTTEEEET
T ss_pred             cCCCCCCccc-cCCCCeEccC
Confidence            3554445788 8999988753

>3u3p_A Tumor necrosis factor receptor superfamily member; trigger apoptosis, apoptosis; 2.09A {Homo sapiens} PDB: 3u3q_A 3u3s_A 3u3t_A 3u3v_A 3qo4_A

Probab=82.09  E-value=1.2  Score=40.26  Aligned_cols=25  Identities=20%  Similarity=0.551  Sum_probs=15.5

Q ss_pred             CcccCCCCCCccCCCCceecCCCCccc
Q psy826          170 GCSTGGPKGCTKCKSGWAADKDIGCYD  196 (329)
Q Consensus       170 ~C~~~~~~~C~~C~~G~~~~~~~~C~d  196 (329)
                      .|+......| .|.+||+... ..|..
T Consensus        81 ~CT~TsDtvC-~C~~G~y~~~-~~C~~  105 (313)
T 3u3p_A           81 PCAALTDREC-TCPPGMFQSN-ATCAP  105 (313)
T ss_dssp             CSBTTBCCEE-ECCTTEEEET-TEEEE
T ss_pred             CCcCCCCccc-cCCCCceecc-ccccc
Confidence            3443344678 8999988764 34543

>3f1s_B Vitamin K-dependent protein Z; PZ, ZPI, complex, serpin, protease inhibitor, protease, GLYC secreted, serine protease inhibitor, blood coagulation; HET: FLC NAG; 2.30A {Homo sapiens}

Probab=81.79  E-value=1.3  Score=39.11  Aligned_cols=37  Identities=22%  Similarity=0.604  Sum_probs=28.3

Q ss_pred             ccccCCcc-cCCCCCCccCCCCceecCCC-CcccCCCCCC
Q psy826          165 ASCESGCS-TGGPKGCTKCKSGWAADKDI-GCYDINECSD  202 (329)
Q Consensus       165 ~~C~~~C~-~~~~~~C~~C~~G~~~~~~~-~C~d~~eC~~  202 (329)
                      +.|.+.|. ..+++.| .|.+||.+..+. .|.+.++|.-
T Consensus        11 ~~C~~~C~~~~~~~~C-~C~~G~~l~~d~~sC~p~~~c~C   49 (283)
T 3f1s_B           11 DGCQHFCLPGQESYTC-SCAQGYRLGEDHKQCVPHDQCAC   49 (283)
T ss_dssp             SSCSSBCCCCTTSCCC-BCCTTEEECTTSSCEEECSTTCT
T ss_pred             CCCCCEeeCCCCCeEe-cCCCCcccCCCCCcccccccccc
Confidence            45556676 7788999 999999987644 5988887754

>1n1i_A Merozoite surface protein-1; MSP1, malaria, surface antigen, glycoprotein, EGF domain, cell adhesion; HET: HIS; 2.40A {Plasmodium knowlesi strain H} SCOP: g.3.11.4 g.3.11.4

Probab=80.96  E-value=1  Score=33.64  Aligned_cols=36  Identities=19%  Similarity=0.398  Sum_probs=31.2

Q ss_pred             CCCCCCceeec-CCCCcccCCCcCCCCCCcCCcccccccCcccccccCCcccccCc
Q psy826          204 NICSGNQFCVN-TEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQA  258 (329)
Q Consensus       204 ~~C~~~~~C~n-~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~~~~  258 (329)
                      ..|+.++.|.. .+|...|+                   |..||.+++..|+.+++
T Consensus        16 t~Cp~NA~C~r~~~G~e~Cr-------------------Cl~gY~~dg~~Cv~~Np   52 (105)
T 1n1i_A           16 TNVPENAACYRYLDGTEEWR-------------------CLLGFKEVGGKCVPASI   52 (105)
T ss_dssp             SCCCTTEEEEECTTSCEEEE-------------------ECTTEEECSSSEEECCC
T ss_pred             CCCCCCCCeEECCCCCEeEE-------------------EECCeeccCCEEEECCc
Confidence            36888999988 66888898                   99999999999998866

>2hey_R Tumor necrosis factor receptor superfamily member; cytokine, receptor-ligan complex, CO-stimulator, TNFSF; 2.00A {Homo sapiens} SCOP: g.24.1.1 g.24.1.1 g.24.1.1 PDB: 2hev_R

Probab=80.95  E-value=0.85  Score=36.35  Aligned_cols=24  Identities=29%  Similarity=0.699  Sum_probs=14.4

Q ss_pred             CCceeecCCCCC-------CCCCCcCCCCcc
Q psy826          126 GNGQCVCNKEYT-------GELCNECNTGYF  149 (329)
Q Consensus       126 gs~~C~C~~G~~-------g~~C~~C~~g~y  149 (329)
                      .+-.|.|++||.       +..|..|+.|+|
T Consensus        79 ~dt~C~C~~G~y~~~g~~~~~~C~~C~~Gtf  109 (146)
T 2hey_R           79 QDTVCRCRAGTQPLDSYKPGVDCAPCPPGHF  109 (146)
T ss_dssp             BCCEEEECTTEEESCSSSTTSSEEECCTTEE
T ss_pred             CCccccCCCCeeeCCCcccCcccccCCCCcc
Confidence            345677777763       235666666666

>3k51_B Decoy receptor 3; DCR3, TL1A, TNF, TNFR, immunity, cytokine, D bond, glycoprotein, membrane, secreted, signal-anchor, transmembrane, apoptosis; 2.45A {Homo sapiens} PDB: 3mi8_D 3mhd_D

Probab=80.04  E-value=0.79  Score=37.90  Aligned_cols=14  Identities=21%  Similarity=0.601  Sum_probs=9.4

Q ss_pred             CCCCccCCCCceec
Q psy826          176 PKGCTKCKSGWAAD  189 (329)
Q Consensus       176 ~~~C~~C~~G~~~~  189 (329)
                      ...|..|.+|.+..
T Consensus        40 ~t~C~pC~~gtY~~   53 (176)
T 3k51_B           40 PTTCGPCPPRHYTQ   53 (176)
T ss_dssp             CCEEEECCTTEECC
T ss_pred             CCccccCCCCCeec
Confidence            35777888886643

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	329
d1lmja1	44	g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens	1e-04
d1lmja2	42	g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapien	4e-04
d1emoa1	43	g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sa	5e-04
d1uzka2	43	g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sa	5e-04
d1dx5i3	40	g.3.11.1 (I:423-462) Thrombomodulin, different EGF	7e-04
d1uzka1	43	g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sa	0.002

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 44

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 1e-04
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 4/43 (9%)

Query: 196 DINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDM 238
           DI+EC       G   CVNT G + C +CD    G       M
Sbjct: 2   DIDECRISPDLCGRGQCVNTPGDFEC-KCDE---GYESGFMMM 40

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 42

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.2 bits (81), Expect = 4e-04
 Identities = 15/31 (48%), Positives = 19/31 (61%), Gaps = 1/31 (3%)

Query: 196 DINECSDENICSGNQFCVNTEGSYRCMQCDP 226
           DI+EC  + +      C NTEGSYRC +C P
Sbjct: 1   DIDECQRDPLLCRGGVCHNTEGSYRC-ECPP 30

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 5e-04
 Identities = 12/28 (42%), Positives = 20/28 (71%), Gaps = 1/28 (3%)

Query: 194 CYDINECSDENICSGNQFCVNTEGSYRC 221
             D++EC + ++C  +  C+NT+GSYRC
Sbjct: 2   AVDMDECKEPDVCK-HGQCINTDGSYRC 28

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 5e-04
 Identities = 10/26 (38%), Positives = 15/26 (57%)

Query: 196 DINECSDENICSGNQFCVNTEGSYRC 221
           DI+EC +         C+NT GS++C
Sbjct: 2   DIDECQELPGLCQGGKCINTFGSFQC 27

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]} Length = 40

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 7e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%), Gaps = 3/31 (9%)

Query: 196 DINECSDENICSGNQFCVNTEGSYRCMQCDP 226
           DI+EC +   CS    C N  G++ C  C P
Sbjct: 1   DIDECENGGFCS--GVCHNLPGTFEC-ICGP 28

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]} Length = 43

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.7 bits (77), Expect = 0.002
 Identities = 14/27 (51%), Positives = 16/27 (59%), Gaps = 1/27 (3%)

Query: 196 DINECSDENICSGNQFCVNTEGSYRCM 222
           D+NEC D   C  +  CVNT GSY C 
Sbjct: 2   DVNECLDPTTCI-SGNCVNTPGSYICD 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	329
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	98.64
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	98.05
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.98
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.94
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	97.93
d2vj3a1	42	Neurogenic locus notch homolog protein 1, Notch1 {	97.9
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.83
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	97.83
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	97.82
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	97.76
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	97.67
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	97.65
d1szba2	45	Mannose-binding protein associated serine protease	97.65
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	97.61
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.6
d1iodg_	44	Coagulation factor X {Cow (Bos taurus) [TaxId: 991	97.57
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	97.54
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	97.52
d1nt0a3	45	Mannose-binding protein associated serine protease	97.52
d1p0sl2	47	Coagulation factor X {Human (Homo sapiens) [TaxId:	97.46
d1n8yc4	120	Protooncoprotein Her2 extracellular domain {Rat (R	97.45
d1nqla4	134	EGF receptor Cys-rich domains {Human (Homo sapiens	97.36
d1m6ba4	101	Receptor protein-tyrosine kinase Erbb-3 Cys-rich d	97.33
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.32
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	97.31
d1edmb_	39	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	97.28
d2c4fl1	37	Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}	97.18
d1nl1a2	65	Prothrombin {Cow (Bos taurus) [TaxId: 9913]}	97.17
d2vj3a2	39	Neurogenic locus notch homolog protein 1, Notch1 {	97.14
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	97.1
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	97.08
d1s78a4	76	Protooncoprotein Her2 extracellular domain {Human	97.07
d1j34c_	46	Coagulation factor IX (IXa) {Human (Homo sapiens)	97.02
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	97.0
d1lqvc_	33	Coagulation factor XIV (Protein C) {Human (Homo sa	96.95
d1kloa1	55	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	96.87
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	96.85
d1gl4a2	40	EGF-like domain of nidogen-1 {Mouse (Mus musculus)	96.75
d1i0ua2	41	Low density lipoprotein (LDL) receptor, different	96.7
d2c4fl3	40	Coagulation factor IX (IXa) {Pig (Sus scrofa) [Tax	96.63
d1xkba1	39	Factor X, N-terminal module {Human (Homo sapiens)	96.52
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	96.52
d2vj3a3	35	Neurogenic locus notch homolog protein 1, Notch1 {	96.41
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	96.36
d1lmja1	44	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.28
d1lmja2	42	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.27
d1nqla4	134	EGF receptor Cys-rich domains {Human (Homo sapiens	96.24
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	96.19
d1emoa1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.17
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	96.14
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	96.14
d1uzka2	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	96.04
d1nqlb_	48	Epidermal growth factor, EGF {Human (Homo sapiens)	96.03
d1kigl_	51	Factor X, N-terminal module {Cow (Bos taurus) [Tax	95.54
d1kloa2	56	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	95.47
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	95.45
d1uzka1	43	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	95.42
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	95.32
d1g1sa2	40	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	95.31
d1szba2	45	Mannose-binding protein associated serine protease	95.08
d1kloa3	51	Laminin gamma1 chain {Mouse (Mus musculus) [TaxId:	95.07
d3bpse1	40	Low density lipoprotein (LDL) receptor, different	95.06
d1autl2	50	Activated protein c (autoprothrombin IIa) {Human (	95.01
d1nt0a3	45	Mannose-binding protein associated serine protease	94.97
d1nzia2	42	Complement C1S component {Human (Homo sapiens) [Ta	94.85
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	94.84
d1g1ta2	39	E-selectin, EGF-domain {Human (Homo sapiens) [TaxI	94.53
d2p3ua1	51	Factor X, N-terminal module {Human (Homo sapiens)	94.49
d1jv2b5	43	Integrin beta EGF-like domains {Human (Homo sapien	94.26
d1apqa_	53	Complement protease C1R {Human (Homo sapiens) [Tax	94.21
d1autl1	48	Activated protein c (autoprothrombin IIa) {Human (	94.18
d1n8yc4	120	Protooncoprotein Her2 extracellular domain {Rat (R	93.68
d1dx5i3	40	Thrombomodulin, different EGF-like domains {Human	93.63
d1q4ga2	42	Prostaglandin H2 synthase-1, EGF-like module {Shee	93.51
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	93.24
d1k36a_	46	Epiregulin, EGF-domain {Human (Homo sapiens) [TaxI	92.85
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	92.79
d3b2ua2	26	EGF receptor Cys-rich domains {Human (Homo sapiens	92.68
d1ioxa_	50	Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]	92.03
d1l3ya_	41	Integrin beta EGF-like domains {Human (Homo sapien	91.97
d1ijqa2	50	Low density lipoprotein (LDL) receptor, different	91.95
d1m6ba3	145	Receptor protein-tyrosine kinase Erbb-3 Cys-rich d	91.72
d1emoa2	39	Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}	91.58
d1moxc_	49	Transforming growth factor alpha {Human (Homo sapi	91.37
d2dtge6	155	Insulin receptor {Human (Homo sapiens) [TaxId: 960	91.21
d1s78a4	76	Protooncoprotein Her2 extracellular domain {Human	90.95
d1haea_	63	Heregulin-alpha, EGF-like domain {Human (Homo sapi	90.67
d1cvua2	41	Prostaglandin H2 synthase-1, EGF-like module {Mous	90.58
d1jv2b4	31	Integrin beta EGF-like domains {Human (Homo sapien	90.36
d1moxa3	149	EGF receptor Cys-rich domains {Human (Homo sapiens	89.99
d2dtge6	155	Insulin receptor {Human (Homo sapiens) [TaxId: 960	89.66
d1tpga1	41	Plasminogen activator (tissue-type), t-PA {Human (	89.62
d1rfnb_	57	Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606	89.08
d1xdtr_	41	Heparin-binding epidermal growth factor, HBEGF {Hu	88.9
d1m6ba4	101	Receptor protein-tyrosine kinase Erbb-3 Cys-rich d	88.2
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	87.21
d2i9aa1	40	Plasminogen activator (urokinase-type) {Human (Hom	86.9
d1m6ba3	145	Receptor protein-tyrosine kinase Erbb-3 Cys-rich d	84.32
d3egfa_	53	Epidermal growth factor, EGF {Mouse (Mus musculus)	82.39
d2bz6l1	53	Coagulation factor VIIa {Human (Homo sapiens) [Tax	82.07

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.64  E-value=8.7e-09  Score=64.23  Aligned_cols=43  Identities=40%  Similarity=0.889  Sum_probs=36.4

Q ss_pred             CcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCcccc
Q psy826          193 GCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICIN  255 (329)
Q Consensus       193 ~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~  255 (329)
                      .|+|||||+.. .+..++.|+|++|+|.|.                   |++||.+++..|+|
T Consensus         1 sCvDidEC~~~-~~~~~~~C~Nt~Gsy~C~-------------------C~~Gy~~~g~~C~D   43 (43)
T d1emoa1           1 SAVDMDECKEP-DVCKHGQCINTDGSYRCE-------------------CPFGYILAGNECVD   43 (43)
T ss_dssp             CCCCCCSSSST-TSCSSSCCCCCSSCCCCC-------------------CCTTEEESSSCEEE
T ss_pred             CCcceeccCCc-CCCCCCEeECCCCCeEeE-------------------CCCCcccCCCcccC
Confidence            38999999875 333478899999999999                   99999998888875

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.05  E-value=8.8e-07  Score=54.64  Aligned_cols=36  Identities=36%  Similarity=0.691  Sum_probs=31.7

Q ss_pred             cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          104 PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      +|...+++|.++++|++   +.++|.|.|++||+|..|+
T Consensus         5 eC~~~~~pC~n~g~C~n---~~g~y~C~C~~G~~G~~Ce   40 (42)
T d2vj3a1           5 ECSLGANPCEHAGKCIN---TLGSFECQCLQGYTGPRCE   40 (42)
T ss_dssp             TTTSSSCSSSTTCEEEE---CSSSEEEECCTTEESTTSC
T ss_pred             cccCCCCCCCCCcEeEC---CCCCEEeECCCCCcCCCCc
Confidence            56555688999999998   8999999999999999885

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.98  E-value=1.3e-06  Score=54.25  Aligned_cols=35  Identities=43%  Similarity=0.995  Sum_probs=30.1

Q ss_pred             ccCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          195 YDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       195 ~d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      .|||||+.. ..|. ++.|+|++|+|.|.                   |++||.++
T Consensus         1 TDidEC~~~~~~C~-~~~C~Nt~Gsy~C~-------------------C~~Gy~~~   36 (44)
T d1lmja1           1 TDIDECRISPDLCG-RGQCVNTPGDFECK-------------------CDEGYESG   36 (44)
T ss_dssp             CCCCTTTTCSSTTT-TSCEEEETTEEEEC-------------------CCSSEEEC
T ss_pred             CcccccCCCCCCCC-CCEeEcCCCCeEEe-------------------CCCCCccC
Confidence            379999876 6675 46899999999999                   99999875

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.94  E-value=1.1e-06  Score=54.42  Aligned_cols=41  Identities=41%  Similarity=0.878  Sum_probs=32.0

Q ss_pred             ccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccc
Q psy826          195 YDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICIN  255 (329)
Q Consensus       195 ~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~  255 (329)
                      .|||||+....| -++.|+|++|+|.|.                   |++||.+.  +..|+|
T Consensus         1 TDidEC~~~~~~-c~~~C~Nt~G~y~C~-------------------C~~Gy~l~~d~~~C~D   43 (43)
T d1uzka1           1 TDVNECLDPTTC-ISGNCVNTPGSYICD-------------------CPPDFELNPTRVGCVD   43 (43)
T ss_dssp             CCCCGGGSTTSS-BTSEEEEETTEEEEE-------------------CCTTCEECTTSSBEEC
T ss_pred             CCccccCCCCcC-cCCEeECCCCCEEEe-------------------cCCCCEECCCCCcccC
Confidence            379999876333 257999999999999                   99999986  445654

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2.8e-06  Score=51.97  Aligned_cols=38  Identities=47%  Similarity=1.189  Sum_probs=31.1

Q ss_pred             CCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccc
Q psy826          197 INECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICIN  255 (329)
Q Consensus       197 ~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~  255 (329)
                      ||||+....|  .+.|+|++|+|+|.                   |++||.+.  +..|++
T Consensus         1 idEC~~~~~C--~~~C~n~~Gsy~C~-------------------C~~Gy~L~~d~~~C~a   40 (41)
T d1i0ua2           1 IDECQDPDTC--SQLCVNLEGGYKCQ-------------------CEEGFQLDPHTKACKA   40 (41)
T ss_dssp             CCTTTTTTSC--SSCEECSSSCCEEC-------------------CCTTEEECTTTCCEEE
T ss_pred             CccCCCCCCC--CCEeECCCCCEEeE-------------------CCCCCeECCCCCcccc
Confidence            5788765678  56999999999999                   99999975  556765

>d2vj3a1 g.3.11.1 (A:411-452) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.90  E-value=2.6e-06  Score=52.44  Aligned_cols=36  Identities=42%  Similarity=0.856  Sum_probs=32.5

Q ss_pred             ccCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          195 YDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       195 ~d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      +|||||+.. .+|.+++.|+|+.++|+|.                   |++||.|.
T Consensus         1 qDideC~~~~~pC~n~g~C~n~~g~y~C~-------------------C~~G~~G~   37 (42)
T d2vj3a1           1 QDVDECSLGANPCEHAGKCINTLGSFECQ-------------------CLQGYTGP   37 (42)
T ss_dssp             CCCCTTTSSSCSSSTTCEEEECSSSEEEE-------------------CCTTEEST
T ss_pred             CCCccccCCCCCCCCCcEeECCCCCEEeE-------------------CCCCCcCC
Confidence            478999865 7999999999999999999                   99999876

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=1.1e-06  Score=54.16  Aligned_cols=34  Identities=50%  Similarity=1.085  Sum_probs=29.1

Q ss_pred             cCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          196 DINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       196 d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      |||||... ..|. ++.|+|++|+|.|.                   |++||.+.
T Consensus         1 DidEC~~~~~~C~-~~~C~Nt~Gsy~C~-------------------C~~Gy~l~   35 (42)
T d1lmja2           1 DIDECQRDPLLCR-GGVCHNTEGSYRCE-------------------CPPGHQLS   35 (42)
T ss_dssp             ECCHHHHCSSTTT-TSEEEEETTEEEEE-------------------SCTTSCCC
T ss_pred             CccccCCCCCCCC-CCEeECCCCCeEEe-------------------CCCCCeEC
Confidence            68899776 6675 56999999999999                   99999975

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.83  E-value=3.4e-06  Score=54.67  Aligned_cols=41  Identities=34%  Similarity=0.806  Sum_probs=31.3

Q ss_pred             ccCCCCCCC-CCCC------CCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCccc
Q psy826          195 YDINECSDE-NICS------GNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICI  254 (329)
Q Consensus       195 ~d~~eC~~~-~~C~------~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~  254 (329)
                      +|||||... ..|.      -.+.|+|++|+|.|.                   |++||.+.  +.+|+
T Consensus         2 vDidEC~~~~~~c~~~~~~~c~~~C~Nt~GsY~C~-------------------C~~Gy~l~~d~~tC~   51 (53)
T d1apqa_           2 VDLDECASRSKSGEEDPQPQCQHLCHNYVGGYFCS-------------------CRPGYELQEDRHSCQ   51 (53)
T ss_dssp             CSCCTTTCSTTTCCCSSSCTTSSEEEEETTEEEEE-------------------CSTTCEECTTSSCEE
T ss_pred             eecccccCCCCCcccCCCCCccCEeEcCCCCeEeE-------------------CCCCCeECCCCCcee
Confidence            588999876 4442      245899999999999                   99999965  44564

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.82  E-value=8e-07  Score=53.81  Aligned_cols=34  Identities=32%  Similarity=0.898  Sum_probs=29.3

Q ss_pred             cCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccccC
Q psy826          196 DINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQ  250 (329)
Q Consensus       196 d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~  250 (329)
                      |||||+....|  .+.|+|++|+|+|.                   |++||.+.+
T Consensus         1 DidEC~~~~~C--~~~C~N~~Gsy~C~-------------------C~~Gy~l~g   34 (40)
T d1dx5i3           1 DIDECENGGFC--SGVCHNLPGTFECI-------------------CGPDSALAG   34 (40)
T ss_dssp             ECCHHHHCSSC--SSEEEECSSSEEEE-------------------ECSSSSCEE
T ss_pred             CccccCCCcCc--cCEeeCCCCCeEeE-------------------CCCCCeeCC
Confidence            68889766778  57999999999999                   999999864

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1.5e-06  Score=53.85  Aligned_cols=35  Identities=43%  Similarity=1.002  Sum_probs=29.6

Q ss_pred             ccCCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          195 YDINECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       195 ~d~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      +|||||+.. ..|. ++.|+|++|+|+|.                   |++||.+.
T Consensus         1 qDinEC~~~~~~c~-~~~C~Nt~Gsy~C~-------------------C~~Gy~l~   36 (43)
T d1uzka2           1 EDIDECQELPGLCQ-GGKCINTFGSFQCR-------------------CPTGYYLN   36 (43)
T ss_dssp             EECCHHHHCGGGGB-TSEEEECSSCEEEE-------------------CCTTCCBC
T ss_pred             CCcccccCCCCCcC-CCEEECCCCCeEeE-------------------CCCCCeEC
Confidence            478999876 6665 46899999999999                   99999976

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.67  E-value=4.4e-06  Score=50.60  Aligned_cols=33  Identities=21%  Similarity=0.571  Sum_probs=30.1

Q ss_pred             CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCcccc
Q psy826          204 NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICIN  255 (329)
Q Consensus       204 ~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~  255 (329)
                      +.|+.++.|+|++|+|.|.                   |++||.+++..|++
T Consensus         7 ~~C~~~A~C~Nt~Gsy~C~-------------------C~~Gy~GdG~~C~~   39 (40)
T d1gl4a2           7 HQCSVHAECRDYATGFCCR-------------------CVANYTGNGRQCVA   39 (40)
T ss_dssp             GGSCTTEEEEECSSCEEEE-------------------ECTTEEECSSSEEE
T ss_pred             CCCCCCCEeecCCCCeEeE-------------------CCCCCcCCCCEeeC
Confidence            4788899999999999999                   99999999998875

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=1.1e-05  Score=48.49  Aligned_cols=31  Identities=32%  Similarity=0.826  Sum_probs=28.1

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ++||.++|+|++   ..++|.|.|.+||+|..|+
T Consensus         5 ~~PC~ngg~C~~---~~~~y~C~C~~G~~G~~Ce   35 (39)
T d1xkba1           5 TSPCQNQGKCKD---GLGEYTCTCLEGFEGKNCE   35 (39)
T ss_dssp             TCCCCSSCEECC---CSSSCCEECCTTEETTTTC
T ss_pred             CCCCCCCcEEEC---CCCCEEEECCCCCCcCcCe
Confidence            478999999998   7888999999999999985

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.65  E-value=9.4e-06  Score=50.59  Aligned_cols=40  Identities=30%  Similarity=0.742  Sum_probs=30.4

Q ss_pred             CCCCCCC-C-CCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccc
Q psy826          197 INECSDE-N-ICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICIN  255 (329)
Q Consensus       197 ~~eC~~~-~-~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~  255 (329)
                      ||||+.. . .++-.+.|+|++|+|+|.                   |++||.+.  +.+|++
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~Gsy~C~-------------------C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2           1 IDECQVAPGEAPTCDHHCHNHLGGFYCS-------------------CRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             CCTTCCCTTSCCSSSSEEEEETTEEEEE-------------------CCTTEEECTTSSCEEE
T ss_pred             CcCCcCCCCCCCCCCCCCccCCCCeEEE-------------------CCCCCeECCCCCCccC
Confidence            5788765 2 222367999999999999                   99999975  556765

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=9.7e-06  Score=48.81  Aligned_cols=31  Identities=32%  Similarity=0.793  Sum_probs=28.0

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ++||.++++|++   ..++|+|.|.+||+|..|+
T Consensus         6 ~~PC~n~g~C~~---~~~~y~C~C~~G~~G~~Ce   36 (39)
T d2vj3a2           6 SNPCQNDATCLD---QIGEFQCICMPGYEGVHCE   36 (39)
T ss_dssp             TCCCCSSCEEEE---CSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCCEEEC---CCCCEEEeCCCCCccCcCe
Confidence            468999999997   7889999999999999985

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=1.1e-05  Score=48.64  Aligned_cols=31  Identities=29%  Similarity=0.778  Sum_probs=28.1

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ++||.++++|++   ..++|+|.|.+||+|..|+
T Consensus         8 ~~PC~ngg~C~~---~~~~y~C~C~~g~~G~~Ce   38 (39)
T d1edmb_           8 SNPCLNGGSCKD---DINSYECWCPFGFEGKNCE   38 (39)
T ss_dssp             TCCCCTTCEEEE---ETTEEEEECCTTCCSTTSC
T ss_pred             CCCCCCCcEEEc---CCCCEEEECCCCCCCCCCC
Confidence            478999999998   7889999999999999885

>d1iodg_ g.32.1.1 (G:) Coagulation factor X {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: GLA-domain
superfamily: GLA-domain
family: GLA-domain
domain: Coagulation factor X
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.57  E-value=6.9e-06  Score=49.53  Aligned_cols=41  Identities=32%  Similarity=0.489  Sum_probs=36.6

Q ss_pred             CchhhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhh
Q psy826           16 DTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWF   68 (329)
Q Consensus        16 ~~~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~   68 (329)
                      |+.+||.+.|+.+|      ||+|++|+     ..+.++++++.+.+. .+|.
T Consensus         2 Ns~lEE~~~GnLER------EC~EE~Cs-----~EEArEvFe~~~~T~-~FW~   42 (44)
T d1iodg_           2 NSFLEEVKQGNLER------ECLEEACS-----LEEAREVFEDAEQTD-EFWS   42 (44)
T ss_dssp             CCSSGGGSCCCHHH------HHTSSCCC-----HHHHHHHHCSHHHHH-HHHH
T ss_pred             chHHHhhccCchhh------HHHHhcCC-----HHHHHHHHcChHHHH-HHHh
Confidence            77899999999999      99999999     999999999988874 5664

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=1.5e-05  Score=46.83  Aligned_cols=31  Identities=35%  Similarity=0.902  Sum_probs=27.6

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ++||.++|+|++   ..++|+|.|.+||+|..|+
T Consensus         5 ~~PC~ngg~C~~---~~~~y~C~C~~g~~G~~CE   35 (35)
T d2vj3a3           5 SSPCLHNGRCLD---KINEFQCECPTGFTGHLCQ   35 (35)
T ss_dssp             TCCSTTTCEEEE---CSSCEEEECCTTEESSSSC
T ss_pred             CCCCCCCcEEEC---CCCCeEEECCCCCCCCCcC
Confidence            478999999997   6788999999999999874

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.52  E-value=9.7e-06  Score=48.23  Aligned_cols=31  Identities=26%  Similarity=0.699  Sum_probs=27.8

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ++||.++++|++   ..++|.|+|++||+|..|+
T Consensus         7 ~~PC~ngg~C~~---~~~~y~C~C~~g~~G~~Ce   37 (37)
T d2c4fl1           7 SSPCQNGGSCKD---QLQSYICFCLPAFEGRNCE   37 (37)
T ss_dssp             GCCCCTTCEEEE---ETTEEEEECCTTEESTTSC
T ss_pred             CCCCCCCCEEEC---CCCCeEEECCCCCcCCCCC
Confidence            478999999997   7889999999999999884

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.52  E-value=1.4e-05  Score=49.81  Aligned_cols=40  Identities=30%  Similarity=0.796  Sum_probs=27.6

Q ss_pred             CCCCCCC-C-CCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccc
Q psy826          197 INECSDE-N-ICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICIN  255 (329)
Q Consensus       197 ~~eC~~~-~-~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~  255 (329)
                      ||||+.. . .++-.+.|+|++|+|+|.                   |++||.+.  +.+|..
T Consensus         1 IdEC~~~~~~~~~C~~~C~Nt~gsy~C~-------------------C~~Gy~L~~d~~tC~~   44 (45)
T d1nt0a3           1 VDECRTSLGDSVPCDHYCHNYLGGYYCS-------------------CRVGYILHQNKHTCSA   44 (45)
T ss_dssp             CCTTC-------CCSSEEEEETTEEEEE-------------------CCTTEEECTTSSCEEE
T ss_pred             CcCCccCCCCcCCCCCEeecCCCCEEEe-------------------CCCCCEECCCCCcccc
Confidence            5788764 2 222367999999999999                   99999875  445653

>d1p0sl2 g.32.1.1 (L:3-49) Coagulation factor X {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: GLA-domain
superfamily: GLA-domain
family: GLA-domain
domain: Coagulation factor X
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=5.9e-06  Score=50.55  Aligned_cols=44  Identities=25%  Similarity=0.457  Sum_probs=38.7

Q ss_pred             chhhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhhccC
Q psy826           17 TAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQH   72 (329)
Q Consensus        17 ~~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~~~~   72 (329)
                      +.+||.+.|+++|      ||+|++|+     ..++++++++.+.+ ..+|..+.+
T Consensus         1 S~lEE~~~GnLER------EC~EE~Cs-----~EEAREvFe~~~~T-~~FW~~Y~d   44 (47)
T d1p0sl2           1 SFLEEMKKGHLER------ECMEETCS-----YEEAREVFEDSDKT-NEFWNKYKD   44 (47)
T ss_dssp             CCCCHHHHHHHHH------HHTSSCCC-----HHHHHHHHCCHHHH-HHHHTTCTT
T ss_pred             ChHHhccCCchhH------HHHHhhCC-----HHHHHHHHcChHHH-HHHHHHhcC
Confidence            4689999999999      99999999     99999999998777 578877665

>d1n8yc4 g.3.9.1 (C:489-608) Protooncoprotein Her2 extracellular domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: Protooncoprotein Her2 extracellular domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=97.45  E-value=7.2e-05  Score=56.75  Aligned_cols=86  Identities=27%  Similarity=0.703  Sum_probs=56.2

Q ss_pred             Cccccc-CCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCC------CCcCCc
Q psy826          163 CHASCE-SGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSCN------GCHGDG  235 (329)
Q Consensus       163 C~~~C~-~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~------~C~g~~  235 (329)
                      ||+.|. ..|.++++..|+.|...++ .  +.|+.  .|.. ..+....+    ....+|.+||+.|.      +|+|++
T Consensus         2 C~~~C~~~gC~Gp~~~~C~~C~~~~~-~--~~Cv~--~C~~-~~~~~~~~----~~~~~C~~C~~~C~~~~~~~tC~Gp~   71 (120)
T d1n8yc4           2 CNSLCAHGHCWGPGPTQCVNCSHFLR-G--QECVE--ECRV-WKGLPREY----VSDKRCLPCHPECQPQNSSETCFGSE   71 (120)
T ss_dssp             CCTTBGGGCBSSSSTTCBSSBSSEEE-T--TEEES--CCSS-SSSSSCEE----CSSSBCEECCTTBCCCSSSCSBSSSS
T ss_pred             cCccccCCCccCcCchhCccccchhh-C--Ccccc--cCCC-ccCCCccc----CCCCeECCcChhhcCcCCCCcccCCC
Confidence            577776 2388899999999985333 2  33431  2221 11111111    23568999999996      699999


Q ss_pred             ccccccCcccccccCCcccccCcCC
Q psy826          236 PDMCEACAEGYKLQQNICINTQAKS  260 (329)
Q Consensus       236 ~~~C~~C~~Gy~~~~~~C~~~~~~~  260 (329)
                      +.+|++|+.  ...++.|++.++..
T Consensus        72 ~~~C~~C~~--~~~~~~Cv~~CP~g   94 (120)
T d1n8yc4          72 ADQCAACAH--YKDSSSCVARCPSG   94 (120)
T ss_dssp             GGGBSSBSS--EEETTEEESSCCEE
T ss_pred             CCcCCcccc--cCcCCeecCcCCCC
Confidence            999999974  45567898776543

>d1nqla4 g.3.9.1 (A:481-614) EGF receptor Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: EGF receptor Cys-rich domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=4e-05  Score=59.26  Aligned_cols=103  Identities=26%  Similarity=0.673  Sum_probs=60.0

Q ss_pred             Cceee-cCCCCCCCCC-CcCCCCccccccCcCCCCCcCCccccc-----CCcccCCCCCCccCCCCceecCCCCcccCCC
Q psy826          127 NGQCV-CNKEYTGELC-NECNTGYFQSYKDEKTILCSKCHASCE-----SGCSTGGPKGCTKCKSGWAADKDIGCYDINE  199 (329)
Q Consensus       127 s~~C~-C~~G~~g~~C-~~C~~g~y~~~~~~~~~~C~~C~~~C~-----~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~e  199 (329)
                      ...|. |...+.+..| +.|+..++..........|.+|+..|.     .+|.+++...|+.|...  +.. +.|+    
T Consensus        16 ~~~C~sC~~~~~~~~Cv~~C~~~~~~~~~~~~~~~C~~C~~~C~~c~~~~tC~g~~~~~C~~C~~~--~~~-~~Cv----   88 (134)
T d1nqla4          16 PRDCVSCRNVSRGRECVDKCKLLEGEPREFVENSECIQCHPECLPQAMNITCTGRGPDNCIQCAHY--IDG-PHCV----   88 (134)
T ss_dssp             GGGBSSBSSEEETTEEESCCSSSSCSSCEEESSSBEEECCTTBCCCTTSCCBSSSSTTCBSSBSSE--EET-TEEE----
T ss_pred             cccCccccCcccCCcccccCCcCccccccccCCCeECCCChhhcccccCcccccCCCccccccccc--cCC-Ceec----
Confidence            34452 5544444445 456543321111123457888888885     36777777788888642  222 3343    


Q ss_pred             CCCCCCCCCCce-------eecCCCCcccCCCcCCC-CCCcCCcccccc
Q psy826          200 CSDENICSGNQF-------CVNTEGSYRCMQCDPSC-NGCHGDGPDMCE  240 (329)
Q Consensus       200 C~~~~~C~~~~~-------C~n~~gs~~C~~C~~~C-~~C~g~~~~~C~  240 (329)
                        .  .|+.+.+       +........|.+|+..| ..|+||++.+|+
T Consensus        89 --~--~Cp~g~~~~~~~~~~~~~~~~~~C~~C~~~C~~~C~gp~~~~C~  133 (134)
T d1nqla4          89 --K--TCPAGVMGENNTLVWKYADAGHVCHLCHPNCTYGCTGPGLEGCP  133 (134)
T ss_dssp             --S--SCCEEEECSSSSEEEEEECTTCBEEECCTTCSSCCSSSSTTTSC
T ss_pred             --C--cCCCCccccccccceeecCCCCeEcccCcccccccCCcCcccCC
Confidence              2  4443332       21223456899999999 579999999886

>d1m6ba4 g.3.9.1 (A:480-580) Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.33  E-value=7.2e-05  Score=54.98  Aligned_cols=85  Identities=25%  Similarity=0.691  Sum_probs=56.0

Q ss_pred             CcccccCC--cccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCC------CCCcCC
Q psy826          163 CHASCESG--CSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSC------NGCHGD  234 (329)
Q Consensus       163 C~~~C~~~--C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C------~~C~g~  234 (329)
                      ||..|. +  |.+++...|+.|+. |..+  +.|+.  .|..   .. +.+= ....+..|.+||+.|      .+|+|+
T Consensus         2 C~~~C~-t~gC~G~~~~~C~~C~~-~~~~--~~Cv~--~C~~---~~-~~~~-~~~~~~~C~~C~~~C~~c~~~~tC~G~   70 (101)
T d1m6ba4           2 CDPLCS-SGGCWGPGPGQCLSCRN-YSRG--GVCVT--HCNF---LN-GEPR-EFAHEAECFSCHPECQPMEGTATCNGS   70 (101)
T ss_dssp             CCTTBC-TTCBSSSSGGGBSSBSS-EESS--SCEES--CCSS---SC-SSSC-EEEETTEEEECCTTBCCCTTSCSBSSS
T ss_pred             cCcccc-CCcccCcChhhchhhhC-hhhC--CEeCC--Cccc---CC-CCcc-ccCCCCccCCCCHHHccccCCCccCCC
Confidence            677785 5  88888889999973 4332  44542  2321   01 1110 012345899999999      479999


Q ss_pred             cccccccCcccccccCCcccccCcCC
Q psy826          235 GPDMCEACAEGYKLQQNICINTQAKS  260 (329)
Q Consensus       235 ~~~~C~~C~~Gy~~~~~~C~~~~~~~  260 (329)
                      ++.+|++|+  +.+.+..|+..++..
T Consensus        71 ~~~~C~~C~--~~~~~~~Cv~~CP~G   94 (101)
T d1m6ba4          71 GSDTCAQCA--HFRDGPHCVSSCPHG   94 (101)
T ss_dssp             SSTTBSSBS--SEEETTEEESSCCSS
T ss_pred             CcccCcCch--hcccCccccCcCcCC
Confidence            999999997  456677898776554

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=1.2e-05  Score=48.44  Aligned_cols=31  Identities=29%  Similarity=0.781  Sum_probs=27.9

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ++||.++|+|++   ..++|.|.|.+||+|..|+
T Consensus         6 ~~pC~ngg~C~~---~~~~~~C~C~~g~~G~~Ce   36 (39)
T d1g1ta2           6 NTSCSGHGECVE---TINNYTCKCDPGFSGLKCE   36 (39)
T ss_dssp             TTGGGGSEEEEE---ETTEEEEEECTTEESTTSC
T ss_pred             CCcCCCCcEEEC---CCCCEEEeCCCCCcCcCcC
Confidence            478999999997   7888999999999999985

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=1.8e-05  Score=47.91  Aligned_cols=31  Identities=29%  Similarity=0.678  Sum_probs=27.9

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ++||.++|+|+.   ..++|+|.|.+||+|..|+
T Consensus         6 ~~pC~ngg~C~~---~~~~y~C~C~~g~~G~~Ce   36 (40)
T d1g1sa2           6 DMSCSKQGECLE---TIGNYTCSCYPGFYGPECE   36 (40)
T ss_dssp             TTGGGGSEEEEE---CSSSEEEEECTTEESTTSC
T ss_pred             CCcCCCCcEEEC---CCCCeEEeCCCCccCCCCC
Confidence            478999999997   6789999999999999985

>d1edmb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.28  E-value=4.9e-05  Score=45.62  Aligned_cols=35  Identities=29%  Similarity=0.679  Sum_probs=31.6

Q ss_pred             ccCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          195 YDINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       195 ~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      +|+|+|.. .+|.++..|++..++|.|.                   |++||.|.
T Consensus         1 id~d~C~~-~PC~ngg~C~~~~~~y~C~-------------------C~~g~~G~   35 (39)
T d1edmb_           1 VDGDQCES-NPCLNGGSCKDDINSYECW-------------------CPFGFEGK   35 (39)
T ss_dssp             CCCCTTTT-CCCCTTCEEEEETTEEEEE-------------------CCTTCCST
T ss_pred             CccccCCC-CCCCCCcEEEcCCCCEEEE-------------------CCCCCCCC
Confidence            36789987 7999999999999999999                   99999876

>d2c4fl1 g.3.11.1 (L:46-82) Factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=97.18  E-value=4.8e-05  Score=45.07  Aligned_cols=34  Identities=24%  Similarity=0.655  Sum_probs=30.8

Q ss_pred             cCCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          196 DINECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       196 d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      |+|+|.. ++|.+++.|++..++|.|.                   |++||.|.
T Consensus         1 D~d~C~~-~PC~ngg~C~~~~~~y~C~-------------------C~~g~~G~   34 (37)
T d2c4fl1           1 DGDQCAS-SPCQNGGSCKDQLQSYICF-------------------CLPAFEGR   34 (37)
T ss_dssp             TCCGGGG-CCCCTTCEEEEETTEEEEE-------------------CCTTEEST
T ss_pred             CcccCCC-CCCCCCCEEECCCCCeEEE-------------------CCCCCcCC
Confidence            5788887 7999999999999999999                   99999876

>d1nl1a2 g.32.1.1 (A:1-65) Prothrombin {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: GLA-domain
superfamily: GLA-domain
family: GLA-domain
domain: Prothrombin
species: Cow (Bos taurus) [TaxId: 9913]

Probab=97.17  E-value=3.2e-05  Score=50.94  Aligned_cols=45  Identities=18%  Similarity=0.361  Sum_probs=38.9

Q ss_pred             Cc-hhhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhhccC
Q psy826           16 DT-AWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFKVQH   72 (329)
Q Consensus        16 ~~-~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~~~~   72 (329)
                      |+ ++||.+.|+++|      ||+|++|+     ..++++++++.+.+ ..||..+.+
T Consensus         2 Ns~flEE~~~GnLER------EC~EE~Cs-----yEEAREvFe~~~~T-~~FW~~Y~~   47 (65)
T d1nl1a2           2 NKGFLEEVRKGNLER------ECLEEPCS-----REEAFEALESLSAT-DAFWAKYTA   47 (65)
T ss_dssp             CCSSSGGGSCCCHHH------HHTSSCCC-----HHHHHHHSSCHHHH-HHHHHHHHH
T ss_pred             cchhHHHhcCCcchh------hhhhccCC-----HHHHHHHHcCcHHH-HHHHHHhcC
Confidence            56 569999999999      99999999     99999999998887 467766655

>d2vj3a2 g.3.11.1 (A:453-491) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00011  Score=44.05  Aligned_cols=33  Identities=33%  Similarity=0.957  Sum_probs=29.9

Q ss_pred             CCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          197 INECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       197 ~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      ||+|.. .+|.++..|++..++|.|.                   |++||.|.
T Consensus         1 Id~C~~-~PC~n~g~C~~~~~~y~C~-------------------C~~G~~G~   33 (39)
T d2vj3a2           1 VNECVS-NPCQNDATCLDQIGEFQCI-------------------CMPGYEGV   33 (39)
T ss_dssp             CCTTTT-CCCCSSCEEEECSSCEEEE-------------------CCTTEESS
T ss_pred             CcCCcC-CCCCCCCEEECCCCCEEEe-------------------CCCCCccC
Confidence            578887 7999999999999999999                   99999986

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.10  E-value=8.5e-05  Score=45.26  Aligned_cols=36  Identities=42%  Similarity=0.843  Sum_probs=27.8

Q ss_pred             CCCCCC--CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCccc
Q psy826          198 NECSDE--NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICI  254 (329)
Q Consensus       198 ~eC~~~--~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~  254 (329)
                      |||+..  ..|  .+.|+|++|+|+|.                   |++||.+.  +.+|+
T Consensus         1 dEC~~~~~~~C--~~~C~n~~Gsy~C~-------------------C~~Gy~L~~d~~tC~   40 (42)
T d1nzia2           1 NECTDFVDVPC--SHFCNNFIGGYFCS-------------------CPPEYFLHDDMKNCG   40 (42)
T ss_dssp             CTTTC-CCCCS--SSEEEEETTEEEEE-------------------CCTTCEECTTSSCEE
T ss_pred             CCCCCCCCcCC--CCEeecCCCCEEEe-------------------CCCCCEECCCCCeec
Confidence            467643  567  56999999999999                   99999975  44564

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00012  Score=44.29  Aligned_cols=33  Identities=24%  Similarity=0.662  Sum_probs=27.0

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ++||.++|+|+... ..+.|.|.|++||+|..|+
T Consensus         3 ~nPC~ngG~C~~~~-~~~~y~C~C~~g~~G~~Ce   35 (41)
T d1tpga1           3 EPRCFNGGTCQQAL-YFSDFVCQCPEGFAGKSCE   35 (41)
T ss_dssp             SCCSCTTCEEEEES-SSSCEEEECCTTCBSSSCC
T ss_pred             CCCCCCCCEEecCC-CCCCeEECCCCCCCCCCcC
Confidence            57899999998522 2467999999999999985

>d1s78a4 g.3.9.1 (A:489-564) Protooncoprotein Her2 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: Protooncoprotein Her2 extracellular domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.07  E-value=0.00013  Score=50.60  Aligned_cols=68  Identities=29%  Similarity=0.704  Sum_probs=44.6

Q ss_pred             Cccccc-CCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCcee-ecCCCCcccCCCcCCCC------CCcCC
Q psy826          163 CHASCE-SGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFC-VNTEGSYRCMQCDPSCN------GCHGD  234 (329)
Q Consensus       163 C~~~C~-~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C-~n~~gs~~C~~C~~~C~------~C~g~  234 (329)
                      ||..|. ..|.+++...|+.|...++ .  +.|+      .  .|+.+.+= .......+|.+||+.|.      +|+||
T Consensus         1 C~~~C~~~gC~Gp~~~~C~~C~~~~~-~--~~Cv------~--~C~~~~~~~~~~~~~~~C~~C~~~C~~~~~~~tC~Gp   69 (76)
T d1s78a4           1 CHQLCARGHCWGPGPTQCVNCSQFLR-G--QECV------E--ECRVLQGLPREYVNARHCLPCHPECQPQNGSVTCFGP   69 (76)
T ss_dssp             CCTTBGGGCBSSSSTTSBSSBSSEEE-T--TEEE------S--SCSSSSCSSCEEESSSCEEECCTTSCCCTTSCCBSSS
T ss_pred             CchhhccCcCCCcChhhChhccchhh-C--Cccc------c--cCCCCCCcCccCCCCCeehhhChhhcCCCCCCccCCc
Confidence            577776 2389899999999985433 2  3343      2  44432110 01123578999999995      69999


Q ss_pred             ccccccc
Q psy826          235 GPDMCEA  241 (329)
Q Consensus       235 ~~~~C~~  241 (329)
                      ++.+|++
T Consensus        70 ~~~~C~s   76 (76)
T d1s78a4          70 EADQCVA   76 (76)
T ss_dssp             SGGGBCC
T ss_pred             CcccCcC
Confidence            9999874

>d1j34c_ g.32.1.1 (C:) Coagulation factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: GLA-domain
superfamily: GLA-domain
family: GLA-domain
domain: Coagulation factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.02  E-value=6.5e-05  Score=45.70  Aligned_cols=40  Identities=23%  Similarity=0.437  Sum_probs=35.1

Q ss_pred             hhhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhhh
Q psy826           18 AWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWFK   69 (329)
Q Consensus        18 ~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~~   69 (329)
                      ++||.+.|+.+|      ||+|++|+     ..++++++++.+.+. .+|..
T Consensus         5 flEE~~~GnLER------EC~EE~Cs-----~EEAREiFe~~~~T~-~FW~~   44 (46)
T d1j34c_           5 KLEEFVRGNLER------ECKEEKCS-----FEEAREVFENTEKTT-EFWKQ   44 (46)
T ss_dssp             SSGGGSCCCHHH------HHTSSCCC-----HHHHHHHHCCHHHHH-HHHHH
T ss_pred             hHHHhcCCchhh------HHHHccCC-----HHHHHHHHcChHHHH-HHHHH
Confidence            479999999999      99999999     999999999988874 56643

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.00  E-value=8.5e-05  Score=44.77  Aligned_cols=32  Identities=34%  Similarity=0.951  Sum_probs=27.2

Q ss_pred             CCCCCCC-CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          197 INECSDE-NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       197 ~~eC~~~-~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      +|||+.. ..|  .+.|+|++++|+|.                   |++||.+.
T Consensus         2 ~neC~~~nggC--~h~C~n~~g~~~C~-------------------C~~Gy~L~   34 (40)
T d3bpse1           2 TNECLDNNGGC--SHVCNDLKIGYECL-------------------CPDGFQLV   34 (40)
T ss_dssp             SCGGGTGGGGC--SSEEEECSSSEEEE-------------------CCTTCCEE
T ss_pred             cccCCCCCCCC--cCEEEcCCCCEEEE-------------------CCCCCEEC
Confidence            5678765 678  56999999999999                   99999975

>d1lqvc_ g.32.1.1 (C:) Coagulation factor XIV (Protein C) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: GLA-domain
superfamily: GLA-domain
family: GLA-domain
domain: Coagulation factor XIV (Protein C)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=5.1e-05  Score=42.40  Aligned_cols=30  Identities=17%  Similarity=0.412  Sum_probs=25.5

Q ss_pred             CchhhhhccCcccccceEEEecccCcccCcccCccchhhHH
Q psy826           16 DTAWEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFA   56 (329)
Q Consensus        16 ~~~~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~   56 (329)
                      |+.+||.+.|+.+|      ||+|++|+     ..+.++++
T Consensus         2 NsflEE~~~gnlER------EC~EE~C~-----~EEArEif   31 (33)
T d1lqvc_           2 NSFLEELRHSSLER------ECIEEICD-----FEEAKEIF   31 (33)
T ss_dssp             CCTTGGGSCCCHHH------HHTSSCCC-----HHHHHHHH
T ss_pred             chHHHHhccCchHH------HHHHHhcC-----HHHHHHHh
Confidence            78899999999999      99999999     55555554

>d1kloa1 g.3.11.2 (A:11-65) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.87  E-value=0.0002  Score=46.31  Aligned_cols=39  Identities=28%  Similarity=0.733  Sum_probs=29.3

Q ss_pred             CCCCCcccCCCCCCCCceee-cCCCCCCCCCCcCCCCcccc
Q psy826          112 CFGNGKCKGNGTRKGNGQCV-CNKEYTGELCNECNTGYFQS  151 (329)
Q Consensus       112 C~~~~~C~~~~~~~gs~~C~-C~~G~~g~~C~~C~~g~y~~  151 (329)
                      |.++++|.... ..+.+.|. |..||+|..|+.|.+|||+.
T Consensus         3 C~~~~~c~~~~-~~~~~vC~~C~~~~~G~~Ce~C~~g~yg~   42 (55)
T d1kloa1           3 CPGGSSCAIVP-KTKEVVCTHCPTGTAGKRCELCDDGYFGD   42 (55)
T ss_dssp             SCTTCCEEECS-SSCCEEECSCCTTEESTTSCEECTTEEEE
T ss_pred             CcCCCccceeC-CCCCEEcCCCCCCCccCcccccCCccccC
Confidence            44556665322 24567884 99999999999999999974

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.85  E-value=0.0002  Score=44.82  Aligned_cols=30  Identities=27%  Similarity=0.698  Sum_probs=26.0

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      ++||.+ |+|.+   ..++|.|.|++||+|..|+
T Consensus        13 ~~PC~n-G~C~~---~~~~y~C~C~~G~~G~~Ce   42 (48)
T d1autl1          13 SLCCGH-GTCID---GIGSFSCDCRSGWEGRFCQ   42 (48)
T ss_dssp             STTTTS-EEECC---CSSCCCEEECTTEESTTSC
T ss_pred             CCCCCC-CEEEC---CCCCCeEeCCCCCcCCCcc
Confidence            467975 89997   7889999999999999985

>d1gl4a2 g.3.11.5 (A:359-398) EGF-like domain of nidogen-1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-like domain of nidogen-1
domain: EGF-like domain of nidogen-1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.75  E-value=3.7e-05  Score=46.35  Aligned_cols=28  Identities=25%  Similarity=0.572  Sum_probs=24.5

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGE  139 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~  139 (329)
                      .+.|..++.|++   ++|+|.|.|++||.|+
T Consensus         6 ~~~C~~~A~C~N---t~Gsy~C~C~~Gy~Gd   33 (40)
T d1gl4a2           6 RHQCSVHAECRD---YATGFCCRCVANYTGN   33 (40)
T ss_dssp             GGGSCTTEEEEE---CSSCEEEEECTTEEEC
T ss_pred             CCCCCCCCEeec---CCCCeEeECCCCCcCC
Confidence            456888999998   8999999999999854

>d1i0ua2 g.3.11.1 (A:42-82) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.70  E-value=0.0005  Score=41.51  Aligned_cols=29  Identities=28%  Similarity=0.757  Sum_probs=22.2

Q ss_pred             ccCCcc-cCCCCCCccCCCCceecCCC-Cccc
Q psy826          167 CESGCS-TGGPKGCTKCKSGWAADKDI-GCYD  196 (329)
Q Consensus       167 C~~~C~-~~~~~~C~~C~~G~~~~~~~-~C~d  196 (329)
                      |.+.|. .+|+|.| .|++||.+.+++ .|++
T Consensus        10 C~~~C~n~~Gsy~C-~C~~Gy~L~~d~~~C~a   40 (41)
T d1i0ua2          10 CSQLCVNLEGGYKC-QCEEGFQLDPHTKACKA   40 (41)
T ss_dssp             CSSCEECSSSCCEE-CCCTTEEECTTTCCEEE
T ss_pred             CCCEeECCCCCEEe-ECCCCCeECCCCCcccc
Confidence            445666 7899999 999999998754 3654

>d2c4fl3 g.32.1.1 (L:5-44) Coagulation factor IX (IXa) {Pig (Sus scrofa) [TaxId: 9823]}

class: Small proteins
fold: GLA-domain
superfamily: GLA-domain
family: GLA-domain
domain: Coagulation factor IX (IXa)
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=96.63  E-value=0.00024  Score=41.72  Aligned_cols=38  Identities=24%  Similarity=0.486  Sum_probs=33.5

Q ss_pred             hhhhccCcccccceEEEecccCcccCcccCccchhhHHhhhHHHHHHhhh
Q psy826           19 WEEEKQKIYAKSEVRLIEIQEKMCSEVSGFLDQCHNFAADIESEIEEWWF   68 (329)
Q Consensus        19 ~ee~~~~~y~~se~~~~e~~e~~C~~~~~~~~~c~~~~~~~~~~~e~~~~   68 (329)
                      .||.+.|+.+|      ||+|++|+     ..++++++++.+.+. .+|.
T Consensus         1 LEE~~~GnlER------EC~EE~Cs-----~EEArEiFe~~~~T~-~FW~   38 (40)
T d2c4fl3           1 LEELRPGSLER------ECKEEQCS-----FEEAREIFKDAERTK-LFWI   38 (40)
T ss_dssp             GGGGSCCCHHH------HTTTSCCC-----HHHHHHHHCSHHHHH-HHHH
T ss_pred             CcccccCchhh------HHHhhcCC-----HHHHHHHHcCcHHHH-HHHh
Confidence            48999999999      99999999     999999999988875 5554

>d1xkba1 g.3.11.1 (A:48-86) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.00071  Score=40.29  Aligned_cols=32  Identities=28%  Similarity=0.830  Sum_probs=28.3

Q ss_pred             CCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          198 NECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       198 ~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      |+|.. .+|.++..|++..++|.|.                   |++||.|.
T Consensus         1 D~C~~-~PC~ngg~C~~~~~~y~C~-------------------C~~G~~G~   32 (39)
T d1xkba1           1 DQCET-SPCQNQGKCKDGLGEYTCT-------------------CLEGFEGK   32 (39)
T ss_dssp             CTTTT-CCCCSSCEECCCSSSCCEE-------------------CCTTEETT
T ss_pred             CcCCC-CCCCCCcEEECCCCCEEEE-------------------CCCCCCcC
Confidence            46776 6999999999999999999                   99999886

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.52  E-value=0.001  Score=42.41  Aligned_cols=33  Identities=24%  Similarity=0.626  Sum_probs=26.5

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .++|.++|+|.... ....++|.|++||+|..|+
T Consensus        11 ~~~C~NgG~C~~~~-~~~~~~C~C~~gy~G~~Ce   43 (53)
T d3egfa_          11 DGYCLNGGVCMHIE-SLDSYTCNCVIGYSGDRCQ   43 (53)
T ss_dssp             SCCSCSSCEEEEES-SSSCEEEECCTTCCSSSSC
T ss_pred             CCCCCCCcEeeccC-CCCCeEeECCCCCcCCCCc
Confidence            46799999997311 3457999999999999985

>d2vj3a3 g.3.11.1 (A:492-526) Neurogenic locus notch homolog protein 1, Notch1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Neurogenic locus notch homolog protein 1, Notch1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.41  E-value=0.0008  Score=39.05  Aligned_cols=32  Identities=25%  Similarity=0.778  Sum_probs=28.0

Q ss_pred             CCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          198 NECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       198 ~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      |+|.. .+|.++..|++..++|.|.                   |++||.|.
T Consensus         1 d~C~~-~PC~ngg~C~~~~~~y~C~-------------------C~~g~~G~   32 (35)
T d2vj3a3           1 DECAS-SPCLHNGRCLDKINEFQCE-------------------CPTGFTGH   32 (35)
T ss_dssp             CTTTT-CCSTTTCEEEECSSCEEEE-------------------CCTTEESS
T ss_pred             CCCCC-CCCCCCcEEECCCCCeEEE-------------------CCCCCCCC
Confidence            45666 6899999999999999999                   99999876

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=96.36  E-value=0.00042  Score=42.07  Aligned_cols=32  Identities=28%  Similarity=0.573  Sum_probs=25.8

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCC-CCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNK-EYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~-G~~g~~C~  142 (329)
                      +++|.++|+|+..  ..++|.|.|.. ||+|..|+
T Consensus         7 ~nPC~ngG~C~~~--~~~~y~C~C~~~G~~G~~Ce   39 (42)
T d1q4ga2           7 YYPCQHQGICVRF--GLDRYQCDCTRTGYSGPNCT   39 (42)
T ss_dssp             GCCCCTTCEEEEE--TTTEEEEECTTSSEETTTTC
T ss_pred             CCCCCCCCEeeeC--CCCCEEEECCCCCcCCcCcC
Confidence            4789999999851  14679999986 99999985

>d1lmja1 g.3.11.1 (A:3-46) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.00045  Score=42.34  Aligned_cols=32  Identities=28%  Similarity=0.768  Sum_probs=25.8

Q ss_pred             cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCCC
Q psy826          104 PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGE  139 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~  139 (329)
                      +|......|. ++.|.|   ++|+|.|.|++||++.
T Consensus         5 EC~~~~~~C~-~~~C~N---t~Gsy~C~C~~Gy~~~   36 (44)
T d1lmja1           5 ECRISPDLCG-RGQCVN---TPGDFECKCDEGYESG   36 (44)
T ss_dssp             TTTTCSSTTT-TSCEEE---ETTEEEECCCSSEEEC
T ss_pred             ccCCCCCCCC-CCEeEc---CCCCeEEeCCCCCccC
Confidence            5655556675 678999   9999999999999764

>d1lmja2 g.3.11.1 (A:47-88) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.27  E-value=0.00033  Score=42.55  Aligned_cols=31  Identities=26%  Similarity=0.588  Sum_probs=24.1

Q ss_pred             cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCC
Q psy826          104 PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTG  138 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g  138 (329)
                      +|...+..|. ++.|.|   ++|+|+|.|++||+.
T Consensus         4 EC~~~~~~C~-~~~C~N---t~Gsy~C~C~~Gy~l   34 (42)
T d1lmja2           4 ECQRDPLLCR-GGVCHN---TEGSYRCECPPGHQL   34 (42)
T ss_dssp             HHHHCSSTTT-TSEEEE---ETTEEEEESCTTSCC
T ss_pred             ccCCCCCCCC-CCEeEC---CCCCeEEeCCCCCeE
Confidence            3433455674 679999   999999999999973

>d1nqla4 g.3.9.1 (A:481-614) EGF receptor Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: EGF receptor Cys-rich domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0018  Score=49.44  Aligned_cols=77  Identities=27%  Similarity=0.707  Sum_probs=52.3

Q ss_pred             CCCCccCCCCCCCCCCCCcccCCCCCCCCceee-cCCCCCCCCC-CcCCCCccccccC------cCCCCCcCCcccccCC
Q psy826           99 GADCKPCLGFPNVCFGNGKCKGNGTRKGNGQCV-CNKEYTGELC-NECNTGYFQSYKD------EKTILCSKCHASCESG  170 (329)
Q Consensus        99 G~~C~~C~~~~~~C~~~~~C~~~~~~~gs~~C~-C~~G~~g~~C-~~C~~g~y~~~~~------~~~~~C~~C~~~C~~~  170 (329)
                      ...|.+|+.....|....+|.+    .+...|. |...+.+..| ..|+.|||.....      .....|.+|+..|...
T Consensus        48 ~~~C~~C~~~C~~c~~~~tC~g----~~~~~C~~C~~~~~~~~Cv~~Cp~g~~~~~~~~~~~~~~~~~~C~~C~~~C~~~  123 (134)
T d1nqla4          48 NSECIQCHPECLPQAMNITCTG----RGPDNCIQCAHYIDGPHCVKTCPAGVMGENNTLVWKYADAGHVCHLCHPNCTYG  123 (134)
T ss_dssp             SSBEEECCTTBCCCTTSCCBSS----SSTTCBSSBSSEEETTEEESSCCEEEECSSSSEEEEEECTTCBEEECCTTCSSC
T ss_pred             CCeECCCChhhcccccCccccc----CCCccccccccccCCCeecCcCCCCccccccccceeecCCCCeEcccCcccccc
Confidence            4578888776666666677875    3344553 6554456778 7899999863322      2345799999999647


Q ss_pred             cccCCCCCC
Q psy826          171 CSTGGPKGC  179 (329)
Q Consensus       171 C~~~~~~~C  179 (329)
                      |.+++...|
T Consensus       124 C~gp~~~~C  132 (134)
T d1nqla4         124 CTGPGLEGC  132 (134)
T ss_dssp             CSSSSTTTS
T ss_pred             cCCcCcccC
Confidence            988877766

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.19  E-value=0.00063  Score=41.03  Aligned_cols=32  Identities=28%  Similarity=0.699  Sum_probs=25.7

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecC-CCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCN-KEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~-~G~~g~~C~  142 (329)
                      ++||.++|+|+..  ..++|+|.|. +||+|..|+
T Consensus         6 ~~PC~ngG~C~~~--~~~~y~C~C~~~gy~G~~Ce   38 (41)
T d1cvua2           6 SNPCQNRGECMST--GFDQYKCDCTRTGFYGENCT   38 (41)
T ss_dssp             TCCCCTTCEEEEE--ETTEEEEECTTSSEETTTTC
T ss_pred             CCCCCCCCEEEEC--CCCCEEEeCcCCCcCCcCcC
Confidence            4789999999851  1467999996 699999985

>d1emoa1 g.3.11.1 (A:2124-2166) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.17  E-value=0.0036  Score=37.91  Aligned_cols=26  Identities=31%  Similarity=0.708  Sum_probs=20.7

Q ss_pred             CCcc-cCCCCCCccCCCCceecCCCCccc
Q psy826          169 SGCS-TGGPKGCTKCKSGWAADKDIGCYD  196 (329)
Q Consensus       169 ~~C~-~~~~~~C~~C~~G~~~~~~~~C~d  196 (329)
                      +.|. .+|+|.| .|++||.+.+ ..|+|
T Consensus        17 ~~C~Nt~Gsy~C-~C~~Gy~~~g-~~C~D   43 (43)
T d1emoa1          17 GQCINTDGSYRC-ECPFGYILAG-NECVD   43 (43)
T ss_dssp             SCCCCCSSCCCC-CCCTTEEESS-SCEEE
T ss_pred             CEeECCCCCeEe-ECCCCcccCC-CcccC
Confidence            4666 8999999 9999999965 45653

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=96.14  E-value=0.0018  Score=40.93  Aligned_cols=36  Identities=19%  Similarity=0.607  Sum_probs=27.9

Q ss_pred             cccccCCcc-cCCCCCCccCCCCceecCCC-CcccCCCC
Q psy826          164 HASCESGCS-TGGPKGCTKCKSGWAADKDI-GCYDINEC  200 (329)
Q Consensus       164 ~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~-~C~d~~eC  200 (329)
                      +++|.+.|. .++++.| .|++||.+..++ .|++++++
T Consensus         5 NGgC~h~C~~~~~~~~C-~C~~Gy~L~~D~~tC~~~~~~   42 (51)
T d1kigl_           5 NGGCDQFCREERSEVRC-SCAHGYVLGDDSKSCVSTERF   42 (51)
T ss_dssp             TTSSSSCCCEETTEECC-CCCTTEEECTTSSCEEECSSS
T ss_pred             CCCcccEeEcCCCcEEe-EcCCCCEECCCCCccccCCcc
Confidence            345666776 7888999 999999998755 48887765

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.14  E-value=0.0013  Score=43.63  Aligned_cols=34  Identities=24%  Similarity=0.624  Sum_probs=26.6

Q ss_pred             CCCCCCCCcccC--CCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKG--NGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~--~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .++|.++|+|..  .....+.|.|.|.+||+|..|+
T Consensus        11 ~~~C~NgG~C~~~~~~~~~~~y~C~C~~gy~G~~Ce   46 (63)
T d1haea_          11 KTFCVNGGECFMVKDLSNPSRYLCKCQPGFTGARCT   46 (63)
T ss_dssp             HTTSCTTCEEEEEESSSSSCCEEEECCTTEESTTSC
T ss_pred             CCcCCCCCEEeecccccCCCCEEeECCCCCCCCCcC
Confidence            367999999952  1114678999999999999995

>d1uzka2 g.3.11.1 (A:1605-1647) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.04  E-value=0.00047  Score=42.10  Aligned_cols=31  Identities=35%  Similarity=0.771  Sum_probs=23.4

Q ss_pred             cCCCCCCCCCCCCcccCCCCCCCCceeecCCCCCC
Q psy826          104 PCLGFPNVCFGNGKCKGNGTRKGNGQCVCNKEYTG  138 (329)
Q Consensus       104 ~C~~~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g  138 (329)
                      +|...+..|. ++.|+|   ++|+|.|.|++||+.
T Consensus         5 EC~~~~~~c~-~~~C~N---t~Gsy~C~C~~Gy~l   35 (43)
T d1uzka2           5 ECQELPGLCQ-GGKCIN---TFGSFQCRCPTGYYL   35 (43)
T ss_dssp             HHHHCGGGGB-TSEEEE---CSSCEEEECCTTCCB
T ss_pred             cccCCCCCcC-CCEEEC---CCCCeEeECCCCCeE
Confidence            3433345564 568999   999999999999973

>d1nqlb_ g.3.11.1 (B:) Epidermal growth factor, EGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.03  E-value=0.00087  Score=41.86  Aligned_cols=33  Identities=27%  Similarity=0.584  Sum_probs=25.9

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .++|.++|+|.... ....++|.|.+||+|..|+
T Consensus         9 ~~~C~ngG~C~~~~-~~~~~~C~C~~gy~G~~Ce   41 (48)
T d1nqlb_           9 DGYCLHDGVCMYIE-ALDKYACNCVVGYIGERCQ   41 (48)
T ss_dssp             CCEECTTCEEEEET-TTTEEEEEECTTEESTTSC
T ss_pred             CCCCCCCcEEeeeC-CCCCeEEeCCCCcccCCCC
Confidence            46799999997411 2456899999999999985

>d1kigl_ g.3.11.1 (L:) Factor X, N-terminal module {Cow (Bos taurus) [TaxId: 9913]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Cow (Bos taurus) [TaxId: 9913]

Probab=95.54  E-value=0.0038  Score=39.32  Aligned_cols=36  Identities=36%  Similarity=0.830  Sum_probs=29.0

Q ss_pred             CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCcCC
Q psy826          204 NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQAKS  260 (329)
Q Consensus       204 ~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~~~  260 (329)
                      ..|  .++|++++++|+|.                   |++||.+.  +.+|+++.+..
T Consensus         6 GgC--~h~C~~~~~~~~C~-------------------C~~Gy~L~~D~~tC~~~~~~p   43 (51)
T d1kigl_           6 GGC--DQFCREERSEVRCS-------------------CAHGYVLGDDSKSCVSTERFP   43 (51)
T ss_dssp             TSS--SSCCCEETTEECCC-------------------CCTTEEECTTSSCEEECSSSC
T ss_pred             CCc--ccEeEcCCCcEEeE-------------------cCCCCEECCCCCccccCCccC
Confidence            356  46789999999999                   99999975  66799887654

>d1kloa2 g.3.11.2 (A:66-121) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.47  E-value=0.0043  Score=39.89  Aligned_cols=26  Identities=31%  Similarity=0.939  Sum_probs=23.1

Q ss_pred             CCCceee-cCCCCCCCCCCcCCCCccc
Q psy826          125 KGNGQCV-CNKEYTGELCNECNTGYFQ  150 (329)
Q Consensus       125 ~gs~~C~-C~~G~~g~~C~~C~~g~y~  150 (329)
                      ..+++|+ |++++.|..|+.|.+|||+
T Consensus        17 ~~tG~C~~C~~nt~G~~Cd~C~~G~yg   43 (56)
T d1kloa2          17 RLTGECLKCIYNTAGFYCDRCKEGFFG   43 (56)
T ss_dssp             TTTCCBCCBCTTEETTTTCEECTTEEE
T ss_pred             CCCCCCCCCCCCCCCCCcCcccCCccc
Confidence            3458895 9999999999999999997

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.45  E-value=0.0033  Score=39.42  Aligned_cols=35  Identities=23%  Similarity=0.617  Sum_probs=26.9

Q ss_pred             cccccCCcc-cCCCCCCccCCCCceecCCC-CcccCCC
Q psy826          164 HASCESGCS-TGGPKGCTKCKSGWAADKDI-GCYDINE  199 (329)
Q Consensus       164 ~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~-~C~d~~e  199 (329)
                      +++|.+.|. .++++.| .|++||.+..++ .|+++++
T Consensus         6 NGgC~~~C~~~~g~~~C-~C~~Gy~L~~D~~tC~~~~~   42 (50)
T d1autl2           6 NGGCTHYCLEEVGWRRC-SCAPGYKLGDDLLQCHPAVK   42 (50)
T ss_dssp             GGGCSSEEEECSSSEEE-ECCTTEEECTTSSCEEECSS
T ss_pred             CCCcccEeecCCCCeEE-ECCCCCEECCCCCccccCCC
Confidence            456777787 7889999 999999998754 4766553

>d1uzka1 g.3.11.1 (A:1486-1528) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.42  E-value=0.0023  Score=38.86  Aligned_cols=23  Identities=22%  Similarity=0.546  Sum_probs=19.2

Q ss_pred             CCcc-cCCCCCCccCCCCceecCCC
Q psy826          169 SGCS-TGGPKGCTKCKSGWAADKDI  192 (329)
Q Consensus       169 ~~C~-~~~~~~C~~C~~G~~~~~~~  192 (329)
                      +.|. .+|+|.| .|++||.+..++
T Consensus        15 ~~C~Nt~G~y~C-~C~~Gy~l~~d~   38 (43)
T d1uzka1          15 GNCVNTPGSYIC-DCPPDFELNPTR   38 (43)
T ss_dssp             SEEEEETTEEEE-ECCTTCEECTTS
T ss_pred             CEeECCCCCEEE-ecCCCCEECCCC
Confidence            4666 7899999 999999998744

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.0024  Score=40.28  Aligned_cols=35  Identities=17%  Similarity=0.551  Sum_probs=27.2

Q ss_pred             cccccCCcc-cCCCCCCccCCCCceecCCC-CcccCCC
Q psy826          164 HASCESGCS-TGGPKGCTKCKSGWAADKDI-GCYDINE  199 (329)
Q Consensus       164 ~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~-~C~d~~e  199 (329)
                      +++|.+.|. .++++.| .|++||.+..++ .|.++++
T Consensus         7 NGgC~h~C~n~~g~~~C-~C~~Gy~L~~D~~tC~~~~~   43 (51)
T d2p3ua1           7 NGDCDQFCHEEQNSVVC-SCARGYTLADNGKACIPTGP   43 (51)
T ss_dssp             GGGCSSEEEEETTEEEE-ECCTTEEECTTSSCEEESSS
T ss_pred             CCCcccEeecCCCCeEe-EcCCCCEECCCCCccccCCc
Confidence            456777787 7889999 999999998754 4776554

>d1g1sa2 g.3.11.1 (A:119-158) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.31  E-value=0.002  Score=38.51  Aligned_cols=35  Identities=34%  Similarity=0.749  Sum_probs=28.6

Q ss_pred             CCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCcccc
Q psy826          199 ECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICIN  255 (329)
Q Consensus       199 eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~  255 (329)
                      .|.. ++|.++..|+...++|+|.                   |++||.|.  .|..
T Consensus         3 ~C~~-~pC~ngg~C~~~~~~y~C~-------------------C~~g~~G~--~Ce~   37 (40)
T d1g1sa2           3 SCQD-MSCSKQGECLETIGNYTCS-------------------CYPGFYGP--ECEY   37 (40)
T ss_dssp             CCCT-TGGGGSEEEEECSSSEEEE-------------------ECTTEEST--TSCE
T ss_pred             cccC-CcCCCCcEEECCCCCeEEe-------------------CCCCccCC--CCCC
Confidence            3544 6898899999999999999                   99999886  5543

>d1szba2 g.3.11.1 (A:124-168) Mannose-binding protein associated serine protease 2, MASP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.08  E-value=0.0039  Score=38.19  Aligned_cols=29  Identities=24%  Similarity=0.780  Sum_probs=22.1

Q ss_pred             ccCCcc-cCCCCCCccCCCCceecCCCC-ccc
Q psy826          167 CESGCS-TGGPKGCTKCKSGWAADKDIG-CYD  196 (329)
Q Consensus       167 C~~~C~-~~~~~~C~~C~~G~~~~~~~~-C~d  196 (329)
                      |.+.|. .+|+|.| .|++||.+..++. |+|
T Consensus        14 C~~~C~Nt~Gsy~C-~C~~Gy~l~~d~~tC~D   44 (45)
T d1szba2          14 CDHHCHNHLGGFYC-SCRAGYVLHRNKRTCSE   44 (45)
T ss_dssp             SSSEEEEETTEEEE-ECCTTEEECTTSSCEEE
T ss_pred             CCCCCccCCCCeEE-ECCCCCeECCCCCCccC
Confidence            445666 8999999 9999999987543 654

>d1kloa3 g.3.11.2 (A:122-172) Laminin gamma1 chain {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Laminin-type module
domain: Laminin gamma1 chain
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.07  E-value=0.0034  Score=39.55  Aligned_cols=25  Identities=36%  Similarity=0.986  Sum_probs=23.1

Q ss_pred             CCceeecCCCCCCCCCCcCCCCccc
Q psy826          126 GNGQCVCNKEYTGELCNECNTGYFQ  150 (329)
Q Consensus       126 gs~~C~C~~G~~g~~C~~C~~g~y~  150 (329)
                      .+++|.|++++.|..|+.|.+|||+
T Consensus        18 ~tGqC~Ck~~v~G~~Cd~C~~g~~~   42 (51)
T d1kloa3          18 VTGQCQCLPHVSGRDCGTCDPGYYN   42 (51)
T ss_dssp             TTCCCCBCTTEESTTCCEECTTCBC
T ss_pred             CCCeecCCCCCcCCCcccccccccC
Confidence            4589999999999999999999996

>d3bpse1 g.3.11.1 (E:293-332) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.06  E-value=0.0025  Score=37.98  Aligned_cols=30  Identities=20%  Similarity=0.519  Sum_probs=22.8

Q ss_pred             cccccCCcc-cCCCCCCccCCCCceecCCCCc
Q psy826          164 HASCESGCS-TGGPKGCTKCKSGWAADKDIGC  194 (329)
Q Consensus       164 ~~~C~~~C~-~~~~~~C~~C~~G~~~~~~~~C  194 (329)
                      ...|.+.|. .++++.| .|++||.+.+...|
T Consensus         9 nggC~h~C~n~~g~~~C-~C~~Gy~L~d~~tC   39 (40)
T d3bpse1           9 NGGCSHVCNDLKIGYEC-LCPDGFQLVAQRRC   39 (40)
T ss_dssp             GGGCSSEEEECSSSEEE-ECCTTCCEETTTEE
T ss_pred             CCCCcCEEEcCCCCEEE-ECCCCCEECCCCcC
Confidence            445666777 8899999 99999999753334

>d1autl2 g.3.11.1 (L:97-146) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.01  E-value=0.0043  Score=38.86  Aligned_cols=34  Identities=35%  Similarity=0.758  Sum_probs=28.0

Q ss_pred             CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCc
Q psy826          204 NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQA  258 (329)
Q Consensus       204 ~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~  258 (329)
                      ..|  .+.|++++++|+|.                   |++||.+.  +.+|+++.+
T Consensus         7 GgC--~~~C~~~~g~~~C~-------------------C~~Gy~L~~D~~tC~~~~~   42 (50)
T d1autl2           7 GGC--THYCLEEVGWRRCS-------------------CAPGYKLGDDLLQCHPAVK   42 (50)
T ss_dssp             GGC--SSEEEECSSSEEEE-------------------CCTTEEECTTSSCEEECSS
T ss_pred             CCc--ccEeecCCCCeEEE-------------------CCCCCEECCCCCccccCCC
Confidence            356  46899999999999                   99999985  667987665

>d1nt0a3 g.3.11.1 (A:120-164) Mannose-binding protein associated serine protease 2, MASP2 {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Mannose-binding protein associated serine protease 2, MASP2
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=94.97  E-value=0.0026  Score=39.04  Aligned_cols=26  Identities=23%  Similarity=0.557  Sum_probs=20.4

Q ss_pred             CCcc-cCCCCCCccCCCCceecCCCC-cc
Q psy826          169 SGCS-TGGPKGCTKCKSGWAADKDIG-CY  195 (329)
Q Consensus       169 ~~C~-~~~~~~C~~C~~G~~~~~~~~-C~  195 (329)
                      +.|. .+++|.| .|++||.+..+++ |.
T Consensus        16 ~~C~Nt~gsy~C-~C~~Gy~L~~d~~tC~   43 (45)
T d1nt0a3          16 HYCHNYLGGYYC-SCRVGYILHQNKHTCS   43 (45)
T ss_dssp             SEEEEETTEEEE-ECCTTEEECTTSSCEE
T ss_pred             CEeecCCCCEEE-eCCCCCEECCCCCccc
Confidence            4565 7899999 9999999987543 54

>d1nzia2 g.3.11.1 (A:118-159) Complement C1S component {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement C1S component
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.85  E-value=0.0034  Score=37.82  Aligned_cols=26  Identities=23%  Similarity=0.525  Sum_probs=21.2

Q ss_pred             cccCCcc-cCCCCCCccCCCCceecCCC
Q psy826          166 SCESGCS-TGGPKGCTKCKSGWAADKDI  192 (329)
Q Consensus       166 ~C~~~C~-~~~~~~C~~C~~G~~~~~~~  192 (329)
                      .|.+.|. .+++|.| .|++||.+..++
T Consensus        10 ~C~~~C~n~~Gsy~C-~C~~Gy~L~~d~   36 (42)
T d1nzia2          10 PCSHFCNNFIGGYFC-SCPPEYFLHDDM   36 (42)
T ss_dssp             CSSSEEEEETTEEEE-ECCTTCEECTTS
T ss_pred             CCCCEeecCCCCEEE-eCCCCCEECCCC
Confidence            4556676 8899999 999999998754

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.84  E-value=0.0067  Score=37.93  Aligned_cols=28  Identities=21%  Similarity=0.562  Sum_probs=21.1

Q ss_pred             cccccCCcc-------cCCCCCCccCCCCceecCCC
Q psy826          164 HASCESGCS-------TGGPKGCTKCKSGWAADKDI  192 (329)
Q Consensus       164 ~~~C~~~C~-------~~~~~~C~~C~~G~~~~~~~  192 (329)
                      +++|.+.|.       ..+++.| .|+.||.+..++
T Consensus        11 NGGC~h~Cl~~p~~~n~~~~y~C-~C~~G~~L~~D~   45 (50)
T d1ijqa2          11 NGGCQYLCLPAPQINPHSPKFTC-ACPDGMLLARDM   45 (50)
T ss_dssp             GGGCSSEEEECCCCSTTCCSEEE-ECCTTCEECTTS
T ss_pred             CCCCcCccCCCcCcccCCCCEEE-eCCCCCEECCCC
Confidence            455666772       4568999 999999998754

>d1g1ta2 g.3.11.1 (A:119-157) E-selectin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: E-selectin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.53  E-value=0.0027  Score=37.62  Aligned_cols=31  Identities=35%  Similarity=0.877  Sum_probs=26.8

Q ss_pred             CCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          199 ECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       199 eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      .|.. ++|.++..|++..++|.|.                   |++||.|.
T Consensus         3 ~C~~-~pC~ngg~C~~~~~~~~C~-------------------C~~g~~G~   33 (39)
T d1g1ta2           3 ACTN-TSCSGHGECVETINNYTCK-------------------CDPGFSGL   33 (39)
T ss_dssp             CCCT-TGGGGSEEEEEETTEEEEE-------------------ECTTEEST
T ss_pred             cccC-CcCCCCcEEECCCCCEEEe-------------------CCCCCcCc
Confidence            3554 6898899999999999999                   99999886

>d2p3ua1 g.3.11.1 (A:87-137) Factor X, N-terminal module {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor X, N-terminal module
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.49  E-value=0.005  Score=38.75  Aligned_cols=35  Identities=40%  Similarity=0.833  Sum_probs=28.3

Q ss_pred             CCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCcC
Q psy826          204 NICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQAK  259 (329)
Q Consensus       204 ~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~~  259 (329)
                      +.|  .+.|+|++++|.|.                   |++||.+.  +.+|++..+.
T Consensus         8 GgC--~h~C~n~~g~~~C~-------------------C~~Gy~L~~D~~tC~~~~~~   44 (51)
T d2p3ua1           8 GDC--DQFCHEEQNSVVCS-------------------CARGYTLADNGKACIPTGPY   44 (51)
T ss_dssp             GGC--SSEEEEETTEEEEE-------------------CCTTEEECTTSSCEEESSSS
T ss_pred             CCc--ccEeecCCCCeEeE-------------------cCCCCEECCCCCccccCCcc
Confidence            356  46899999999999                   99999985  5679877653

>d1jv2b5 g.3.11.6 (B:563-605) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.26  E-value=0.0077  Score=36.15  Aligned_cols=30  Identities=43%  Similarity=1.052  Sum_probs=24.3

Q ss_pred             CCCCCCCcccCCCCCCCCceeecC-CCCCCCCCCcCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCN-KEYTGELCNECNT  146 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~-~G~~g~~C~~C~~  146 (329)
                      ..|+++|+|.-       +.|+|. +||+|.+|+.|+.
T Consensus        11 ~iCng~G~C~c-------G~C~C~~~gy~G~~Ce~Cpt   41 (43)
T d1jv2b5          11 LLCSGRGKCEC-------GSCVCIQPGSYGDTCEKCPT   41 (43)
T ss_dssp             SGGGGTEEEET-------TEEEECCSSCBSTTSCBCTT
T ss_pred             CEECCCCEEEC-------CEeEeCCCCccCCccccCCC
Confidence            45888888885       789995 7999999988753

>d1apqa_ g.3.11.1 (A:) Complement protease C1R {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Complement protease C1R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.21  E-value=0.0079  Score=38.09  Aligned_cols=20  Identities=25%  Similarity=0.587  Sum_probs=17.8

Q ss_pred             CCcccCCCCCCCCceeecCCCCC
Q psy826          115 NGKCKGNGTRKGNGQCVCNKEYT  137 (329)
Q Consensus       115 ~~~C~~~~~~~gs~~C~C~~G~~  137 (329)
                      ...|+|   ++|+|.|.|++||+
T Consensus        23 ~~~C~N---t~GsY~C~C~~Gy~   42 (53)
T d1apqa_          23 QHLCHN---YVGGYFCSCRPGYE   42 (53)
T ss_dssp             SSEEEE---ETTEEEEECSTTCE
T ss_pred             cCEeEc---CCCCeEeECCCCCe
Confidence            357999   99999999999997

>d1autl1 g.3.11.1 (L:49-96) Activated protein c (autoprothrombin IIa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Activated protein c (autoprothrombin IIa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.18  E-value=0.011  Score=36.51  Aligned_cols=32  Identities=25%  Similarity=0.725  Sum_probs=26.8

Q ss_pred             CCCCCCCCCCCCCceeecCCCCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          197 INECSDENICSGNQFCVNTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       197 ~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      .++|.. ++|.+ ..|++..++|.|.                   |++||.|.
T Consensus         8 ~~~C~~-~PC~n-G~C~~~~~~y~C~-------------------C~~G~~G~   39 (48)
T d1autl1           8 EHPCAS-LCCGH-GTCIDGIGSFSCD-------------------CRSGWEGR   39 (48)
T ss_dssp             CCSSSS-TTTTS-EEECCCSSCCCEE-------------------ECTTEEST
T ss_pred             CCcccC-CCCCC-CEEECCCCCCeEe-------------------CCCCCcCC
Confidence            456776 68976 5899999999999                   99999876

>d1n8yc4 g.3.9.1 (C:489-608) Protooncoprotein Her2 extracellular domain {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: Protooncoprotein Her2 extracellular domain
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=93.68  E-value=0.011  Score=44.16  Aligned_cols=28  Identities=25%  Similarity=0.769  Sum_probs=22.3

Q ss_pred             CCCCcCCcccccC-----CcccCCCCCCccCCC
Q psy826          157 TILCSKCHASCES-----GCSTGGPKGCTKCKS  184 (329)
Q Consensus       157 ~~~C~~C~~~C~~-----~C~~~~~~~C~~C~~  184 (329)
                      ...|.+||..|..     +|.++++..|+.|..
T Consensus        48 ~~~C~~C~~~C~~~~~~~tC~Gp~~~~C~~C~~   80 (120)
T d1n8yc4          48 DKRCLPCHPECQPQNSSETCFGSEADQCAACAH   80 (120)
T ss_dssp             SSBCEECCTTBCCCSSSCSBSSSSGGGBSSBSS
T ss_pred             CCeECCcChhhcCcCCCCcccCCCCCcCCcccc
Confidence            4578999999963     688888889988864

>d1dx5i3 g.3.11.1 (I:423-462) Thrombomodulin, different EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Thrombomodulin, different EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.63  E-value=0.016  Score=34.25  Aligned_cols=24  Identities=25%  Similarity=0.699  Sum_probs=20.4

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTG  138 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g  138 (329)
                      ++|.  ..|+|   ++|+|+|.|++||+.
T Consensus         9 ~~C~--~~C~N---~~Gsy~C~C~~Gy~l   32 (40)
T d1dx5i3           9 GFCS--GVCHN---LPGTFECICGPDSAL   32 (40)
T ss_dssp             SSCS--SEEEE---CSSSEEEEECSSSSC
T ss_pred             cCcc--CEeeC---CCCCeEeECCCCCee
Confidence            4574  58998   999999999999984

>d1q4ga2 g.3.11.1 (A:32-73) Prostaglandin H2 synthase-1, EGF-like module {Sheep (Ovis aries) [TaxId: 9940]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Sheep (Ovis aries) [TaxId: 9940]

Probab=93.51  E-value=0.011  Score=35.45  Aligned_cols=33  Identities=30%  Similarity=0.732  Sum_probs=27.2

Q ss_pred             CCCCCCCCCCCCCceeecC-CCCcccCCCcCCCCCCcCCcccccccCcc-ccccc
Q psy826          197 INECSDENICSGNQFCVNT-EGSYRCMQCDPSCNGCHGDGPDMCEACAE-GYKLQ  249 (329)
Q Consensus       197 ~~eC~~~~~C~~~~~C~n~-~gs~~C~~C~~~C~~C~g~~~~~C~~C~~-Gy~~~  249 (329)
                      +|.|.. ++|.++..|++. .++|.|.                   |.. ||.|.
T Consensus         2 id~C~~-nPC~ngG~C~~~~~~~y~C~-------------------C~~~G~~G~   36 (42)
T d1q4ga2           2 VNPCCY-YPCQHQGICVRFGLDRYQCD-------------------CTRTGYSGP   36 (42)
T ss_dssp             CCGGGG-CCCCTTCEEEEETTTEEEEE-------------------CTTSSEETT
T ss_pred             CccCcC-CCCCCCCEeeeCCCCCEEEE-------------------CCCCCcCCc
Confidence            567776 799999999875 5789999                   976 89876

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.24  E-value=0.02  Score=32.41  Aligned_cols=24  Identities=38%  Similarity=0.839  Sum_probs=20.1

Q ss_pred             CCCCCCCCCCCCceeecCCCCcccC
Q psy826          198 NECSDENICSGNQFCVNTEGSYRCM  222 (329)
Q Consensus       198 ~eC~~~~~C~~~~~C~n~~gs~~C~  222 (329)
                      |||...++|.+ ..|.|..|.|.|.
T Consensus         2 dECsignpCGn-GTCtNviGgFec~   25 (39)
T d1emoa2           2 DECSVGNPCGN-GTCKNVIGGFECT   25 (39)
T ss_dssp             CGGGTTCSSSS-SCEEECSSSEEEC
T ss_pred             CccccCCccCC-ceeeecccceEEe
Confidence            57777778874 5799999999999

>d1k36a_ g.3.11.1 (A:) Epiregulin, EGF-domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epiregulin, EGF-domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.85  E-value=0.023  Score=34.70  Aligned_cols=32  Identities=28%  Similarity=0.629  Sum_probs=23.5

Q ss_pred             CCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          109 PNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       109 ~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .+.|.+ |.|.... ....+.|.|++||.|..|+
T Consensus        11 ~~yC~n-G~C~~~~-~~~~~~C~C~~gY~G~RCe   42 (46)
T d1k36a_          11 NGYCLH-GQCIYLV-DMSQNYCRCEVGYTGVRCE   42 (46)
T ss_dssp             CSSCSS-EEEEEET-TTTEEEEEECTTCSSTTSC
T ss_pred             CCcCcC-CEEEEeC-CCCccEeECCCCceecCce
Confidence            367885 7785311 2556899999999999885

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.79  E-value=0.023  Score=36.43  Aligned_cols=35  Identities=20%  Similarity=0.558  Sum_probs=25.9

Q ss_pred             cccccCCcc-cC-CCCCCccCCCCceecCCC-CcccCCC
Q psy826          164 HASCESGCS-TG-GPKGCTKCKSGWAADKDI-GCYDINE  199 (329)
Q Consensus       164 ~~~C~~~C~-~~-~~~~C~~C~~G~~~~~~~-~C~d~~e  199 (329)
                      +++|.+.|. .+ +++.| .|+.||.+..++ .|.++.+
T Consensus         7 NGgC~h~C~~~~~~~~~C-~C~~Gy~L~~D~~tC~~~~~   44 (57)
T d1rfnb_           7 NGRCEQFCKNSADNKVVC-SCTEGYRLAENQKSCEPAVP   44 (57)
T ss_dssp             GGGCSSEEEECTTSCEEE-ECCTTEEECTTSSSEEECSS
T ss_pred             CCCcccEeeeCCCCCeEe-ECCCCCEECCCCCccccCCC
Confidence            566777886 44 46899 999999998755 4776554

>d1ioxa_ g.3.11.1 (A:) Betacellulin-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Betacellulin-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.03  E-value=0.028  Score=34.98  Aligned_cols=31  Identities=23%  Similarity=0.514  Sum_probs=23.6

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      +.|.+++.|.- . ..+...|.|+.||+|..|+
T Consensus        14 ~yC~nGgcc~~-~-~~~~~~C~C~~gy~G~rCe   44 (50)
T d1ioxa_          14 HYCIKGRCRFV-V-AEQTPSCVCDEGYIGARCE   44 (50)
T ss_dssp             TSCTTCCEEEE-T-TTTEEEECCCTTEETTTTC
T ss_pred             CCccCCeEEEe-C-CCCCcEeECCCCCeeCCCc
Confidence            56888787742 1 3556899999999999885

>d1l3ya_ g.3.11.6 (A:) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.97  E-value=0.015  Score=34.52  Aligned_cols=22  Identities=36%  Similarity=1.049  Sum_probs=18.7

Q ss_pred             CCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          114 GNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       114 ~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .+|.|..       ++|.|.+||+|..|+
T Consensus        19 ~hG~C~~-------G~C~C~~Gw~G~~Ce   40 (41)
T d1l3ya_          19 GRGLCFC-------GKCRCHPGFEGSACQ   40 (41)
T ss_dssp             HHEEEET-------TEEEECTTCCTTTTC
T ss_pred             CCCeEEC-------CEEEcCCCCcccCcc
Confidence            4688875       789999999999885

>d1ijqa2 g.3.11.1 (A:643-692) Low density lipoprotein (LDL) receptor, different EGF domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Low density lipoprotein (LDL) receptor, different EGF domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.95  E-value=0.037  Score=34.40  Aligned_cols=36  Identities=19%  Similarity=0.628  Sum_probs=24.7

Q ss_pred             CCCCCC-CCCCCCceee------cCCCCcccCCCcCCCCCCcCCcccccccCccccccc--CCccc
Q psy826          198 NECSDE-NICSGNQFCV------NTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICI  254 (329)
Q Consensus       198 ~eC~~~-~~C~~~~~C~------n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~  254 (329)
                      +||... +.|  .+.|+      ++.++|+|.                   |+.||.+.  +.+|+
T Consensus         5 neC~~~NGGC--~h~Cl~~p~~~n~~~~y~C~-------------------C~~G~~L~~D~~tCi   49 (50)
T d1ijqa2           5 ERTTLSNGGC--QYLCLPAPQINPHSPKFTCA-------------------CPDGMLLARDMRSCL   49 (50)
T ss_dssp             SSSSSGGGGC--SSEEEECCCCSTTCCSEEEE-------------------CCTTCEECTTSSCEE
T ss_pred             cccCCCCCCC--cCccCCCcCcccCCCCEEEe-------------------CCCCCEECCCCCccc
Confidence            455554 457  45886      445789998                   99999986  44564

>d1m6ba3 g.3.9.1 (A:166-310) Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.72  E-value=0.072  Score=39.79  Aligned_cols=111  Identities=18%  Similarity=0.458  Sum_probs=58.5

Q ss_pred             CCCCCCCC-CCccCCCCCCCCCCCCcccCCCCCCCCceee-cCCCCCCCCC-CcCCCCccccccCcCCCCCcCCcccccC
Q psy826           93 CPVDHYGA-DCKPCLGFPNVCFGNGKCKGNGTRKGNGQCV-CNKEYTGELC-NECNTGYFQSYKDEKTILCSKCHASCES  169 (329)
Q Consensus        93 C~~G~~G~-~C~~C~~~~~~C~~~~~C~~~~~~~gs~~C~-C~~G~~g~~C-~~C~~g~y~~~~~~~~~~C~~C~~~C~~  169 (329)
                      |+.+||.. .+..|...   |..  -+.    ......|. |..++.+..| +.|+.|||..   .  ..+..|...+. 
T Consensus        30 C~~~~~~~~~~~~C~~~---C~~--~~~----~~~~~~C~~C~~~~~~~~C~~~C~~g~~~~---~--~~~~cc~~~~~-   94 (145)
T d1m6ba3          30 CNGHCFGPNPNQCCHDE---CAG--GCS----GPQDTDCFACRHFNDSGACVPRCPQPLVYN---K--LTFQLEPNPHT-   94 (145)
T ss_dssp             SSSCBSSSSTTCBCCTT---BSS--CBS----SSSGGGBSSBSSEEETTEEESSCSCSEEEC---T--TTSSEEECTTC-
T ss_pred             CCCCcccCCCCCcCCCc---ccc--ccC----CCCCCeeecccccccCCcccCCCCceEecC---C--CeeecCCCCCC-
Confidence            88888743 44444332   211  011    12234564 7777778888 6899999852   1  12233333332 


Q ss_pred             CcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCcccCCCcCCC
Q psy826          170 GCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRCMQCDPSC  228 (329)
Q Consensus       170 ~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C~~C~~~C  228 (329)
                      .+. .....+..|..+|.+.. +.|+      .  .|+.+.+-....+...|.+|+..|
T Consensus        95 ~~~-~~~~c~~~c~~~~~~~~-~~C~------~--~Cp~g~~~~~~~~~~~C~~C~~~C  143 (145)
T d1m6ba3          95 KYQ-YGGVCVASCPHNFVVDQ-TSCV------R--ACPPDKMEVDKNGLKMCEPCGGLC  143 (145)
T ss_dssp             CEE-ETTEEESSCCSSCEEET-TEEE------S--SCCTTEEEEEETTEEEEEECSSCC
T ss_pred             ccC-CCCcccccccCCeECcC-CeEe------C--CCCCCeeeecCCCCCeeCCcCCCC
Confidence            232 12234446777777665 3343      2  566666644434556677666654

>d1emoa2 g.3.11.1 (A:2167-2205) Fibrillin-1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Fibrillin-1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.58  E-value=0.038  Score=31.24  Aligned_cols=24  Identities=38%  Similarity=0.869  Sum_probs=21.2

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYT  137 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~  137 (329)
                      ++|. +++|.|   ..|.|.|.|..||.
T Consensus         8 npCG-nGTCtN---viGgFec~C~~GFe   31 (39)
T d1emoa2           8 NPCG-NGTCKN---VIGGFECTCEEGFE   31 (39)
T ss_dssp             CSSS-SSCEEE---CSSSEEECCSSSSC
T ss_pred             CccC-Cceeee---cccceEEeecCCcC
Confidence            6785 789999   89999999999997

>d1moxc_ g.3.11.1 (C:) Transforming growth factor alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Transforming growth factor alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.37  E-value=0.034  Score=34.36  Aligned_cols=37  Identities=24%  Similarity=0.569  Sum_probs=25.2

Q ss_pred             cCCC-CCCCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          104 PCLG-FPNVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       104 ~C~~-~~~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      +|+. ..+-|.+++.|.- . ......|.|++||.|..|+
T Consensus         6 pC~~~~~~yClnGgcc~~-~-~~~~~~C~C~~gy~G~RCe   43 (49)
T d1moxc_           6 DCPDSHTQFCFHGTCRFL-V-QEDKPACVCHSGYVGARCE   43 (49)
T ss_dssp             CCCCCSSCSSTTEEEEEE-T-TTTEEEEEECTTEESTTSC
T ss_pred             ccCcccCCEeeCCeEEec-C-CCCCcEeECCCCCEecCCc
Confidence            4443 2356887776631 1 2456889999999999985

>d2dtge6 g.3.9.1 (E:157-311) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.21  E-value=0.36  Score=36.33  Aligned_cols=83  Identities=17%  Similarity=0.435  Sum_probs=44.9

Q ss_pred             eee-cCCCCCCCCC-CcCCCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCC
Q psy826          129 QCV-CNKEYTGELC-NECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENIC  206 (329)
Q Consensus       129 ~C~-C~~G~~g~~C-~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C  206 (329)
                      .|. |...+.+..| ..|+.|||...   . ..+. +...|. .+.......|..|..+|.+.. +.|+      .  .|
T Consensus        68 ~C~~c~~~~~~~~C~~~Cp~g~y~~~---~-~~c~-~~~~C~-~~~~~~~~~c~~c~~~~~~~~-~~Cv------~--~C  132 (155)
T d2dtge6          68 KCVACRNFYLDGRCVETCPPPYYHFQ---D-WRCV-NFSFCQ-DLHHKCKNSRRQGCHQYVIHN-NKCI------P--EC  132 (155)
T ss_dssp             GEECCSSCBBTTBCCSSCCSSCCCCT---T-SBCC-CHHHHH-HHSSCCCSTTTTSCCCCEEET-TEEE------S--SC
T ss_pred             ccccccceeECCEEccccCCCeeecC---C-cccc-cCCccc-ccCCCCCCcccccCCCCEeeC-CeEc------c--cC
Confidence            453 6666667778 78999998422   1 1121 122232 222222344546777777655 3343      2  67


Q ss_pred             CCCceeecCCCCcccCCCcCCC
Q psy826          207 SGNQFCVNTEGSYRCMQCDPSC  228 (329)
Q Consensus       207 ~~~~~C~n~~gs~~C~~C~~~C  228 (329)
                      +.+.+  .......|.+|+..|
T Consensus       133 p~g~~--~~~~~~~C~~C~~~C  152 (155)
T d2dtge6         133 PSGYT--MNSSNLLCTPCLGPC  152 (155)
T ss_dssp             CSSCE--ECSSSCBEECCCSSC
T ss_pred             CCCCE--eCCCcCEECCCCCCC
Confidence            76665  233456788777765

>d1s78a4 g.3.9.1 (A:489-564) Protooncoprotein Her2 extracellular domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: Protooncoprotein Her2 extracellular domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.95  E-value=0.05  Score=36.79  Aligned_cols=34  Identities=26%  Similarity=0.757  Sum_probs=27.1

Q ss_pred             CcCCCCC--CcCCcccccccCcccccccCCcccccCcC
Q psy826          224 CDPSCNG--CHGDGPDMCEACAEGYKLQQNICINTQAK  259 (329)
Q Consensus       224 C~~~C~~--C~g~~~~~C~~C~~Gy~~~~~~C~~~~~~  259 (329)
                      ||+.|..  |+||++++|++|+..+  ..++|+..++.
T Consensus         1 C~~~C~~~gC~Gp~~~~C~~C~~~~--~~~~Cv~~C~~   36 (76)
T d1s78a4           1 CHQLCARGHCWGPGPTQCVNCSQFL--RGQECVEECRV   36 (76)
T ss_dssp             CCTTBGGGCBSSSSTTSBSSBSSEE--ETTEEESSCSS
T ss_pred             CchhhccCcCCCcChhhChhccchh--hCCcccccCCC
Confidence            7899977  9999999999998543  35688877643

>d1haea_ g.3.11.1 (A:) Heregulin-alpha, EGF-like domain {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heregulin-alpha, EGF-like domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.67  E-value=0.032  Score=36.48  Aligned_cols=37  Identities=22%  Similarity=0.575  Sum_probs=27.4

Q ss_pred             CCCCCCCCCCCCCceee-----cCCCCcccCCCcCCCCCCcCCcccccccCcccccccCCcccc
Q psy826          197 INECSDENICSGNQFCV-----NTEGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICIN  255 (329)
Q Consensus       197 ~~eC~~~~~C~~~~~C~-----n~~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~  255 (329)
                      .++|.. ++|.++..|.     +..++|.|.                   |++||.|.  +|..
T Consensus         6 c~ec~~-~~C~NgG~C~~~~~~~~~~~y~C~-------------------C~~gy~G~--~Ce~   47 (63)
T d1haea_           6 CAEKEK-TFCVNGGECFMVKDLSNPSRYLCK-------------------CQPGFTGA--RCTE   47 (63)
T ss_dssp             CCHHHH-TTSCTTCEEEEEESSSSSCCEEEE-------------------CCTTEEST--TSCE
T ss_pred             CCCCcC-CcCCCCCEEeecccccCCCCEEeE-------------------CCCCCCCC--CcCC
Confidence            345554 6898889995     455789999                   99999986  5643

>d1cvua2 g.3.11.1 (A:33-73) Prostaglandin H2 synthase-1, EGF-like module {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Prostaglandin H2 synthase-1, EGF-like module
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=90.58  E-value=0.053  Score=32.12  Aligned_cols=32  Identities=31%  Similarity=0.780  Sum_probs=25.6

Q ss_pred             CCCCCCCCCCCCceeecC-CCCcccCCCcCCCCCCcCCcccccccCc-cccccc
Q psy826          198 NECSDENICSGNQFCVNT-EGSYRCMQCDPSCNGCHGDGPDMCEACA-EGYKLQ  249 (329)
Q Consensus       198 ~eC~~~~~C~~~~~C~n~-~gs~~C~~C~~~C~~C~g~~~~~C~~C~-~Gy~~~  249 (329)
                      |.|.. .+|.++..|++. .++|+|.                   |+ +||.|.
T Consensus         2 d~C~~-~PC~ngG~C~~~~~~~y~C~-------------------C~~~gy~G~   35 (41)
T d1cvua2           2 NPCCS-NPCQNRGECMSTGFDQYKCD-------------------CTRTGFYGE   35 (41)
T ss_dssp             CTTTT-CCCCTTCEEEEEETTEEEEE-------------------CTTSSEETT
T ss_pred             CcCcC-CCCCCCCEEEECCCCCEEEe-------------------CcCCCcCCc
Confidence            45665 689999999875 5789999                   96 699876

>d1jv2b4 g.3.11.6 (B:532-562) Integrin beta EGF-like domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: Integrin beta EGF-like domains
domain: Integrin beta EGF-like domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.36  E-value=0.052  Score=29.43  Aligned_cols=25  Identities=44%  Similarity=1.317  Sum_probs=20.0

Q ss_pred             CCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          111 VCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       111 ~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      .|.+++.|.=       +.|+|.+||+|..|.
T Consensus         4 ~C~ghG~C~C-------G~C~C~~gw~G~~CN   28 (31)
T d1jv2b4           4 MCSGHGQCSC-------GDCLCDSDWTGYYCN   28 (31)
T ss_dssp             CSCCCTTCCS-------TTTCCCTTEESSSSC
T ss_pred             eccCCCcccC-------CceEccCCccccccc
Confidence            4777888874       679999999998773

>d1moxa3 g.3.9.1 (A:163-311) EGF receptor Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: EGF receptor Cys-rich domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.99  E-value=0.14  Score=38.25  Aligned_cols=86  Identities=17%  Similarity=0.486  Sum_probs=44.2

Q ss_pred             ceee-cCCCCCCCCC-CcCCCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCC
Q psy826          128 GQCV-CNKEYTGELC-NECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENI  205 (329)
Q Consensus       128 ~~C~-C~~G~~g~~C-~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~  205 (329)
                      ..|. |...+.+..| ..|++|||.   +.....|..+...    +.......+..|+.+|.....+.|+      .  .
T Consensus        60 ~~C~~C~~~~~~~~C~~~C~~g~~~---~~~~~~c~~~~~~----~~~~~~~c~~~c~~~~~~~~~~~C~------~--~  124 (149)
T d1moxa3          60 SDCLVCRKFRDEATCKDTCPPLMLY---NPTTYQMDVNPEG----KYSFGATCVKKCPRNYVVTDHGSCV------R--A  124 (149)
T ss_dssp             TTEEEESSEEETTEEESSCCCSEEE---ETTTTEEEECTTC----CEEETTEEESSCCTTCEECTTSBEE------S--S
T ss_pred             CcCcCCCcccccCceeccCCCCeEe---cCCCceecccCCc----ccCCCCCcccccCCCeEeCCCCcEe------C--C
Confidence            4453 6555556677 689999984   2233333332222    1112223444678888776545453      1  5


Q ss_pred             CCCCceeecCCCCcccCCCcCCC
Q psy826          206 CSGNQFCVNTEGSYRCMQCDPSC  228 (329)
Q Consensus       206 C~~~~~C~n~~gs~~C~~C~~~C  228 (329)
                      |+.+.+=....+...|.+|+..|
T Consensus       125 C~~g~~~~~~~~~~~C~~C~~~C  147 (149)
T d1moxa3         125 CGADSYEMEEDGVRKCKKCEGPC  147 (149)
T ss_dssp             CCSSCCCBCSSSSCBCCCC-CCC
T ss_pred             CCCCCEeecCCCCCEEcCcCCCC
Confidence            55554422223345688777664

>d2dtge6 g.3.9.1 (E:157-311) Insulin receptor {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: Insulin receptor
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.66  E-value=0.17  Score=38.28  Aligned_cols=98  Identities=20%  Similarity=0.430  Sum_probs=43.6

Q ss_pred             cCCCCccccccCcCCCCCcCCcccccCCccc-CCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCccc
Q psy826          143 ECNTGYFQSYKDEKTILCSKCHASCESGCST-GGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRC  221 (329)
Q Consensus       143 ~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~-~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C  221 (329)
                      .|+.+++....+   ..+..|+..|...|.. .....|..|..++..   +.|      ..  .|+.+.+-..   ...|
T Consensus        35 ~C~~~c~~~~~~---~~~~cC~~~C~~~C~~~~~~~~C~~c~~~~~~---~~C------~~--~Cp~g~y~~~---~~~c   97 (155)
T d2dtge6          35 VCPTICKSHGCT---AEGLCCHSECLGNCSQPDDPTKCVACRNFYLD---GRC------VE--TCPPPYYHFQ---DWRC   97 (155)
T ss_dssp             CCCTTTGGGCBC---SSSCBCCTTCCSEESSSSCGGGEECCSSCBBT---TBC------CS--SCCSSCCCCT---TSBC
T ss_pred             cCCCCCCCCccC---CCCCccChhhCcccccCCCCcccccccceeEC---CEE------cc--ccCCCeeecC---Cccc
Confidence            466655432222   2234466666544542 223455445443321   223      32  5655544211   1222


Q ss_pred             CCCcCCCCCCcCCcccccccCcccccccCCcccccCc
Q psy826          222 MQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQA  258 (329)
Q Consensus       222 ~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~~~~  258 (329)
                      . +...|..+.+.....|..|.++|.+.+++|+..++
T Consensus        98 ~-~~~~C~~~~~~~~~~c~~c~~~~~~~~~~Cv~~Cp  133 (155)
T d2dtge6          98 V-NFSFCQDLHHKCKNSRRQGCHQYVIHNNKCIPECP  133 (155)
T ss_dssp             C-CHHHHHHHSSCCCSTTTTSCCCCEEETTEEESSCC
T ss_pred             c-cCCcccccCCCCCCcccccCCCCEeeCCeEcccCC
Confidence            2 22333334444444555566666666666665443

>d1tpga1 g.3.11.1 (A:51-91) Plasminogen activator (tissue-type), t-PA {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (tissue-type), t-PA
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.62  E-value=0.078  Score=31.33  Aligned_cols=27  Identities=22%  Similarity=0.615  Sum_probs=22.7

Q ss_pred             CCCCCCceeecCC--CCcccCCCcCCCCCCcCCcccccccCccccccc
Q psy826          204 NICSGNQFCVNTE--GSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ  249 (329)
Q Consensus       204 ~~C~~~~~C~n~~--gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~  249 (329)
                      ++|.++..|+...  ++|.|.                   |++||.|.
T Consensus         4 nPC~ngG~C~~~~~~~~y~C~-------------------C~~g~~G~   32 (41)
T d1tpga1           4 PRCFNGGTCQQALYFSDFVCQ-------------------CPEGFAGK   32 (41)
T ss_dssp             CCSCTTCEEEEESSSSCEEEE-------------------CCTTCBSS
T ss_pred             CCCCCCCEEecCCCCCCeEEC-------------------CCCCCCCC
Confidence            5888899998753  578999                   99999986

>d1rfnb_ g.3.11.1 (B:) Factor IX (IXa) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Factor IX (IXa)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.08  E-value=0.071  Score=33.99  Aligned_cols=35  Identities=37%  Similarity=0.806  Sum_probs=27.0

Q ss_pred             CCCCCCceeecCCC-CcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCcC
Q psy826          204 NICSGNQFCVNTEG-SYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQAK  259 (329)
Q Consensus       204 ~~C~~~~~C~n~~g-s~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~~  259 (329)
                      +.|  .++|+++++ ++.|.                   |++||.+.  +..|+++.+.
T Consensus         8 GgC--~h~C~~~~~~~~~C~-------------------C~~Gy~L~~D~~tC~~~~~f   45 (57)
T d1rfnb_           8 GRC--EQFCKNSADNKVVCS-------------------CTEGYRLAENQKSCEPAVPF   45 (57)
T ss_dssp             GGC--SSEEEECTTSCEEEE-------------------CCTTEEECTTSSSEEECSSS
T ss_pred             CCc--ccEeeeCCCCCeEeE-------------------CCCCCEECCCCCccccCCCc
Confidence            346  468999874 78999                   99999985  5679887653

>d1xdtr_ g.3.11.1 (R:) Heparin-binding epidermal growth factor, HBEGF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Heparin-binding epidermal growth factor, HBEGF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.90  E-value=0.091  Score=31.01  Aligned_cols=31  Identities=32%  Similarity=0.842  Sum_probs=23.2

Q ss_pred             CCCCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          110 NVCFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       110 ~~C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      +-|.+ |.|.... ......|.|..||.|..|+
T Consensus         8 ~yCih-G~C~~i~-~l~~~~C~C~~gY~G~RCq   38 (41)
T d1xdtr_           8 DFCIH-GECKYVK-ELRAPSCICHPGYHGERCH   38 (41)
T ss_dssp             TCCSS-EEECCBG-GGTBCCEEECTTEESTTCC
T ss_pred             CEeEC-cEEeecC-cCCCceeECCCCCeecCcc
Confidence            45774 8897422 2556789999999999885

>d1m6ba4 g.3.9.1 (A:480-580) Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.20  E-value=0.19  Score=35.65  Aligned_cols=34  Identities=35%  Similarity=1.041  Sum_probs=26.8

Q ss_pred             CCcCCCCC--CcCCcccccccCcccccccCCcccccCc
Q psy826          223 QCDPSCNG--CHGDGPDMCEACAEGYKLQQNICINTQA  258 (329)
Q Consensus       223 ~C~~~C~~--C~g~~~~~C~~C~~Gy~~~~~~C~~~~~  258 (329)
                      .||+.|.+  |+|+++++|++|+. | +.+++|+..+.
T Consensus         1 vC~~~C~t~gC~G~~~~~C~~C~~-~-~~~~~Cv~~C~   36 (101)
T d1m6ba4           1 VCDPLCSSGGCWGPGPGQCLSCRN-Y-SRGGVCVTHCN   36 (101)
T ss_dssp             SCCTTBCTTCBSSSSGGGBSSBSS-E-ESSSCEESCCS
T ss_pred             CcCccccCCcccCcChhhchhhhC-h-hhCCEeCCCcc
Confidence            38999976  99999999999973 4 44667887653

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.21  E-value=0.11  Score=32.48  Aligned_cols=32  Identities=31%  Similarity=0.802  Sum_probs=22.9

Q ss_pred             cccccCCcc-cCC-CCCCccCCCCceecCCC-Cccc
Q psy826          164 HASCESGCS-TGG-PKGCTKCKSGWAADKDI-GCYD  196 (329)
Q Consensus       164 ~~~C~~~C~-~~~-~~~C~~C~~G~~~~~~~-~C~d  196 (329)
                      +++|.+.|. .++ .+.| .|+.||.+..++ .|..
T Consensus         6 NGGC~h~C~~~~~~~~~C-~C~~Gy~L~~D~~tC~~   40 (53)
T d2bz6l1           6 NGGCEQYCSDHTGTKRSC-RCHEGYSLLADGVSCTP   40 (53)
T ss_dssp             GGGCSSEEEEETTTEEEE-ECCTTEEECTTSSCEEE
T ss_pred             CCCCcCEeeeCCCCCEEe-ECCCCCEECCCCCcccC
Confidence            456777776 444 5789 999999998754 3653

>d2i9aa1 g.3.11.1 (A:10-49) Plasminogen activator (urokinase-type) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Plasminogen activator (urokinase-type)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.90  E-value=0.17  Score=28.69  Aligned_cols=31  Identities=29%  Similarity=0.747  Sum_probs=23.1

Q ss_pred             CCCCCcccCCCCCCCCceeecCCCCCCCCCC
Q psy826          112 CFGNGKCKGNGTRKGNGQCVCNKEYTGELCN  142 (329)
Q Consensus       112 C~~~~~C~~~~~~~gs~~C~C~~G~~g~~C~  142 (329)
                      |.++|.|+......+-.+|.|+.+|.|..|+
T Consensus         4 ClNGG~Cvsyk~FS~I~rC~CPk~f~G~HCE   34 (40)
T d2i9aa1           4 CLNGGTCVSNKYFSNIHWCNCPKKFGGQHCE   34 (40)
T ss_dssp             CCTTCEEEECSSSTTCEEEECCTTEESTTSC
T ss_pred             cccCCEEEEEehhcCCEEecCCcccCceeEE
Confidence            7788999853322344689999999998884

>d1m6ba3 g.3.9.1 (A:166-310) Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: Growth factor receptor domain
family: Growth factor receptor domain
domain: Receptor protein-tyrosine kinase Erbb-3 Cys-rich domains
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.32  E-value=0.73  Score=33.76  Aligned_cols=95  Identities=18%  Similarity=0.360  Sum_probs=49.3

Q ss_pred             CcCCCCccccccCcCCCCCcCCcccccCCcccCCCCCCccCCCCceecCCCCcccCCCCCCCCCCCCCceeecCCCCccc
Q psy826          142 NECNTGYFQSYKDEKTILCSKCHASCESGCSTGGPKGCTKCKSGWAADKDIGCYDINECSDENICSGNQFCVNTEGSYRC  221 (329)
Q Consensus       142 ~~C~~g~y~~~~~~~~~~C~~C~~~C~~~C~~~~~~~C~~C~~G~~~~~~~~C~d~~eC~~~~~C~~~~~C~n~~gs~~C  221 (329)
                      ..|+.+||..   .   .+..|+..|...+.+.....|+.|..++.+   ..|+      .  .|+.+.+..+  .  .+
T Consensus        28 ~~C~~~~~~~---~---~~~~C~~~C~~~~~~~~~~~C~~C~~~~~~---~~C~------~--~C~~g~~~~~--~--~~   86 (145)
T d1m6ba3          28 PQCNGHCFGP---N---PNQCCHDECAGGCSGPQDTDCFACRHFNDS---GACV------P--RCPQPLVYNK--L--TF   86 (145)
T ss_dssp             TTSSSCBSSS---S---TTCBCCTTBSSCBSSSSGGGBSSBSSEEET---TEEE------S--SCSCSEEECT--T--TS
T ss_pred             CcCCCCcccC---C---CCCcCCCccccccCCCCCCeeecccccccC---Cccc------C--CCCceEecCC--C--ee
Confidence            4577777732   1   234466666632335556678778766543   2232      2  5655555221  1  23


Q ss_pred             CCCcCCCCCCcCCcccccccCcccccccCCcccccCc
Q psy826          222 MQCDPSCNGCHGDGPDMCEACAEGYKLQQNICINTQA  258 (329)
Q Consensus       222 ~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~~~~~  258 (329)
                      ..|...+..+.. ....+..|..+|.+++..|+...+
T Consensus        87 ~cc~~~~~~~~~-~~~c~~~c~~~~~~~~~~C~~~Cp  122 (145)
T d1m6ba3          87 QLEPNPHTKYQY-GGVCVASCPHNFVVDQTSCVRACP  122 (145)
T ss_dssp             SEEECTTCCEEE-TTEEESSCCSSCEEETTEEESSCC
T ss_pred             ecCCCCCCccCC-CCcccccccCCeECcCCeEeCCCC
Confidence            323333433332 233455577788777777876543

>d3egfa_ g.3.11.1 (A:) Epidermal growth factor, EGF {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Epidermal growth factor, EGF
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=82.39  E-value=0.51  Score=29.26  Aligned_cols=30  Identities=30%  Similarity=0.736  Sum_probs=23.7

Q ss_pred             CCCCCCceeecC--CCCcccCCCcCCCCCCcCCcccccccCcccccccCCccc
Q psy826          204 NICSGNQFCVNT--EGSYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQQNICI  254 (329)
Q Consensus       204 ~~C~~~~~C~n~--~gs~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~~~~C~  254 (329)
                      ++|.++..|.+.  ...|.|.                   |++||.|.  +|.
T Consensus        12 ~~C~NgG~C~~~~~~~~~~C~-------------------C~~gy~G~--~Ce   43 (53)
T d3egfa_          12 GYCLNGGVCMHIESLDSYTCN-------------------CVIGYSGD--RCQ   43 (53)
T ss_dssp             CCSCSSCEEEEESSSSCEEEE-------------------CCTTCCSS--SSC
T ss_pred             CCCCCCcEeeccCCCCCeEeE-------------------CCCCCcCC--CCc
Confidence            578888999754  3579999                   99999987  554

>d2bz6l1 g.3.11.1 (L:90-142) Coagulation factor VIIa {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Knottins (small inhibitors, toxins, lectins)
superfamily: EGF/Laminin
family: EGF-type module
domain: Coagulation factor VIIa
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.07  E-value=0.2  Score=31.27  Aligned_cols=33  Identities=36%  Similarity=0.805  Sum_probs=24.9

Q ss_pred             CCCCCceeecCCC-CcccCCCcCCCCCCcCCcccccccCccccccc--CCcccccCc
Q psy826          205 ICSGNQFCVNTEG-SYRCMQCDPSCNGCHGDGPDMCEACAEGYKLQ--QNICINTQA  258 (329)
Q Consensus       205 ~C~~~~~C~n~~g-s~~C~~C~~~C~~C~g~~~~~C~~C~~Gy~~~--~~~C~~~~~  258 (329)
                      .|  .+.|+++++ ++.|.                   |+.||.+.  +.+|++..+
T Consensus         8 GC--~h~C~~~~~~~~~C~-------------------C~~Gy~L~~D~~tC~~~~~   43 (53)
T d2bz6l1           8 GC--EQYCSDHTGTKRSCR-------------------CHEGYSLLADGVSCTPTVE   43 (53)
T ss_dssp             GC--SSEEEEETTTEEEEE-------------------CCTTEEECTTSSCEEECSS
T ss_pred             CC--cCEeeeCCCCCEEeE-------------------CCCCCEECCCCCcccCCCc
Confidence            46  468998876 58899                   99999985  557876543