Psyllid ID: psy8322

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-
Protein Sequence
MAALVSCVLLQTALVLLRPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESLLEFNITMTSIQNDKVGNASKEGYELFRDRIEIPESTSPVVGAVLESLLEFNITMTSIQNDKVGNR
Secondary Structure (PSIPRED)
cHHHHHHHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccEEEEEccccccccEEEEEEEEccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHcccccHHHHHHHccccEEEEEEccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHcccEEEEEcccccEEEEccccccccccccccccccccccccHHHHHccccccccccccccccHHHHHEEEEEEccccEEEEEcccccccccccccccccccccEEEEEEccccccccccccEEEEEcccccccHHHHHHHHHHHHHHHHHcccccccccccccccEEccccccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHHccccccccccccccccccccccEEEcEEEEcccccccEEEEcccccEEEEEEEcccccccccccHHHHHHcHHHHHHHHHHHHcccEEEEEccccccccccEEEEcEEEccccccccccEEEEEcccEEEEEEEEcccccEEEEEEEccccccEEEEEEEEEEEEcEEcccccccccccccccccccccccccccccccccHHHHHHHHHHccccEEEEEEcccccc
Secondary Structure Prediction (SSPRO)
cHHHHHccccccccccccccccccccccccHHHHHHHHHHHHHHccccEEEEEccccccccEEEEEEEEccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHccccHHHHHHHcccEEEEEcccccccHHEEcccccccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHcccEEEEEEccccEEEEEccccccccccccccccccccHHHHHHHHHccccccccccccccHHHHHHHHHHHHHHccccEEEEEccccccccccccccHHcccEEEEEEEEccccccccccEEEEEEccccccHHHHHHHHHHHHHHHHHHcccccHHHHHccccEEEEEcccccccccccccHHHHHHHHHccccEEEcccccccccccccccccHHHHHHHHHHHHHcccccccccccccccccccccccEcccEEEEccccccccHEEEcccEEEEEEEEccccccHHHHHHHHHHHHHHHHHHHHHHHcccEEEEEcccccccccEEEEEEcccccEEEcccccEEEEEcccEEEEEEEEcccccEEEEEEEccccccEEEEEEccccccccccccccccccccccccccccccccccccccccHHHHHHHHHHHHccccccEEEccccccc
Coil and Loop (DISEMBL)
MAALVSCVLLQTALVLlrpaagmsfgnyhnyDLMREELENFTRVYANMTELYSIGKSVLGKDLLvvnistapvhqlgvpnvkivgnihgdepiGREIILRLLEHLVVEYIrgdsnirflldntrihllpnlnpdgselavegncrsgrgrnninnhdlnrqfpdyfrhnrsniptlvstsqsidpEVQAVIDWMNSVPFVMSLqlhggnvvasypydsfygesknninnhdlnrqfpdyfrhnrsniptlvstsqsidpEVQAVIDWMNSVPFVMSLqlhggnvvasypydsfygesKDLLVVNIstapvhqlgvpnvkivgnihgdepiGREIILRLLEYLVVEYIrgdsnirflldntrihllpnlnpdgselavegncrsgrgrtppflislflpfpvtknkpaltpdtDVFLHLASTYarlhptmhmkrpcpgntvlkfengvtngaawysfsggmadynyLYHGCLELTLeisccrypapseipihwrSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRdrikipestspVVGAVLESLLEFNITMTSIqndkvgnasKEGYELFRdrieipestspVVGAVLESLLEFNITMTSiqndkvgnr
Flexible Loop (DISEMBL)
MAALVSCVLLQTALVLLRPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTapvhqlgvpnvKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLpnlnpdgseLAVEGNCRSgrgrnninnhdLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESLLEFNITmtsiqndkvgnaSKEGYELFRDRIEIPESTSPVVGAVLESLLefnitmtsiqndkvgnr
Low Complexity Region (SEG)
MAALVSCVLLQTALVLLRPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTppflislflpfpVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESLLEFNITMTSIQNDKVGNASKEGYELFRDRIEIPESTSPVVGAVLESLLEFNITMTSIQNDKVGNR
Disordered region (IsUnstruct)
***LVSCVLLQTALVLLRPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLN***************************RQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESLLEFNITMTSIQNDKVGNASKEGYELFRDRIEIPESTSPVVGAVLESLLEFNITMT**********
Disordered Region (DISOPRED)
*****SCVLLQTALV*LRPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPT********DPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP**QLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCP**TVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESLLEF***********************************VVGAVLESLLEFNITMTSIQND*V***
Disordered Region (DISEMBL)
MAALVSCVLLQTALVLLRPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESLLEFNITMTSIQNDKVGNASKEGYELFRDRIEIPESTSPVVGAVLESLLEFNITMTSI********
Disordered Region (DISPRO)
MA***SCVLLQTALVLLRPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESLLEFNITMTSI***********GYELFRDRIEIPESTSPVVGAVLESLLEFNITMTSIQN******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (Phobius)
SSSSSSSSSSSSSSSSSSSSSSooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
SSSSSSSSSSSSSSSSSSSSSSSoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MAALVSCVLLQTALVLLRPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESLLEFNITMTSIQNDKVGNASKEGYELFRDRIEIPESTSPVVGAVLESLLEFNITMTSIQNDKVGNR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

No hits with e-value below 0.001 by BLAST

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Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	651
FB|FBgn0030778	527	CG4678 [Drosophila melanogaste	0.276	0.341	0.473	1.7e-88
MGI|MGI:1917824	443	Cpm "carboxypeptidase M" [Mus	0.328	0.483	0.406	1.1e-81
ZFIN|ZDB-GENE-081112-2	1350	cpda "carboxypeptidase D, a" [	0.274	0.132	0.434	5.9e-67
UNIPROTKB|P14384	443	CPM "Carboxypeptidase M" [Homo	0.296	0.435	0.425	4.3e-79
RGD|1310532	443	Cpm "carboxypeptidase M" [Ratt	0.328	0.483	0.397	5.7e-79
UNIPROTKB|E1C041	443	CPM "Uncharacterized protein"	0.330	0.485	0.426	1.6e-78
UNIPROTKB|D4A6Z2	1133	Cpd "Carboxypeptidase D" [Ratt	0.276	0.158	0.447	1.2e-77
UNIPROTKB|E1BLR9	1108	LOC532189 "Uncharacterized pro	0.288	0.169	0.442	7.6e-71
MGI|MGI:107265	1377	Cpd "carboxypeptidase D" [Mus	0.276	0.130	0.442	1.3e-76
UNIPROTKB|E2R830	1379	CPD "Uncharacterized protein"	0.276	0.130	0.458	4.4e-77

FB|FBgn0030778 CG4678 [Drosophila melanogaster (taxid:7227)]

 Score = 470 (170.5 bits), Expect = 1.7e-88, Sum P(2) = 1.7e-88
 Identities = 91/192 (47%), Positives = 128/192 (66%)

Query:    28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV-HQLGVPNVKIVGN 86
             YH+++ +   L   +  Y N+T LYSIGKS+ G+DL V+ +S++P  H +G P+VK VGN
Sbjct:    72 YHDHEELTRFLRATSARYPNLTALYSIGKSIQGRDLWVMVVSSSPYEHMVGKPDVKYVGN 131

Query:    87 IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS 146
             IHG+EP+GRE++L L+++ V  Y   D  +++LLDNTRIH+LP +NPDG  ++ EG C  
Sbjct:   132 IHGNEPVGREMLLHLIQYFVTSY-NTDQYVKWLLDNTRIHILPTMNPDGYAVSKEGTCDG 190

Query:   147 GRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 206
             G+GR N    DLNR FPDYF+ N           Q   PE  +V DW++ + FV+S  LH
Sbjct:   191 GQGRYNARGFDLNRNFPDYFKQNNKR-------GQ---PETDSVKDWISKIQFVLSGSLH 240

Query:   207 GGNVVASYPYDS 218
             GG +VASYPYD+
Sbjct:   241 GGALVASYPYDN 252

GO:0004185 "serine-type carboxypeptidase activity" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

MGI|MGI:1917824 Cpm "carboxypeptidase M" [Mus musculus (taxid:10090)]

 Score = 441 (160.3 bits), Expect = 1.1e-81, Sum P(2) = 1.1e-81
 Identities = 93/229 (40%), Positives = 143/229 (62%)

Query:    15 VLLRPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV- 73
             +LL   A + F  YH+ + M   L++  + Y+++T L+SIGKSV G++L V+ +   P  
Sbjct:    10 LLLPVVAALDF-RYHHQEGMEAFLKSVAQNYSSITHLHSIGKSVRGRNLWVLVVGQTPKE 68

Query:    74 HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNP 133
             H++G+P  K V N+HGDE +GRE++L L+++LV  Y R D  I  L+D+TRIH++P++NP
Sbjct:    69 HRVGIPEFKYVANMHGDETVGRELLLHLIDYLVSSY-RKDPEITHLIDSTRIHIMPSMNP 127

Query:   134 DGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDW 193
             DG E   + +C    GR N NN+DLNR FPD F +N  N+     T Q   PE  A+++W
Sbjct:   128 DGFEAVQKPDCYYSNGRENYNNYDLNRNFPDAFENN--NV-----TKQ---PETLAIMEW 177

Query:   194 MNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRH 242
             + +  FV+S  LHGG +VASYP+D+   ++   + +  L     D F+H
Sbjct:   178 LKTETFVLSANLHGGALVASYPFDNGV-QATGTLLSRSLTPD-DDVFQH 224

GO:0003674 "molecular_function" evidence=ND

GO:0004180 "carboxypeptidase activity" evidence=IEA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008233 "peptidase activity" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0031225 "anchored to membrane" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

ZFIN|ZDB-GENE-081112-2 cpda "carboxypeptidase D, a" [Danio rerio (taxid:7955)]

 Score = 408 (148.7 bits), Expect = 5.9e-67, Sum P(2) = 5.9e-67
 Identities = 83/191 (43%), Positives = 124/191 (64%)

Query:    28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGN 86
             +H Y  M   ++ F+  Y+++T LYSIGKSV  + L V+ IS  P VH+LG P  K +GN
Sbjct:   474 HHRYIDMELFMKKFSSEYSSITRLYSIGKSVQKRLLWVMEISNNPGVHELGEPEFKYIGN 533

Query:    87 IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS 146
             +HG+E +GRE++L L+E+L   Y   D  +  L+D TRIH++P++NPDG E++ +G+   
Sbjct:   534 MHGNEVVGRELLLNLIEYLCRNY-GTDPEVTQLVDTTRIHIMPSMNPDGYEVSQKGDVEG 592

Query:   147 GRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 206
              +GRNN  N+DLNR FPD F+        L++    I PE  AV++W  +  FV+S  LH
Sbjct:   593 IKGRNNSKNYDLNRNFPDRFK--------LIT--DPIQPETLAVMNWSKNYSFVLSANLH 642

Query:   207 GGNVVASYPYD 217
             GG++V +YP+D
Sbjct:   643 GGSLVVNYPFD 653

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA

UNIPROTKB|P14384 CPM "Carboxypeptidase M" [Homo sapiens (taxid:9606)]

 Score = 411 (149.7 bits), Expect = 4.3e-79, Sum P(2) = 4.3e-79
 Identities = 88/207 (42%), Positives = 130/207 (62%)

Query:    14 LVLLRP-AAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP 72
             L LL P  A + F NYH  + M   L+   + Y+++T L+SIGKSV G++L V+ +   P
Sbjct:     8 LGLLLPLVAALDF-NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFP 66

Query:    73 V-HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNL 131
               H++G+P  K V N+HGDE +GRE++L L+++LV    + D  I  L+++TRIH++P++
Sbjct:    67 KEHRIGIPEFKYVANMHGDETVGRELLLHLIDYLVTSDGK-DPEITNLINSTRIHIMPSM 125

Query:   132 NPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVI 191
             NPDG E   + +C    GR N N +DLNR FPD F +N  N+        S  PE  AV+
Sbjct:   126 NPDGFEAVKKPDCYYSIGRENYNQYDLNRNFPDAFEYN--NV--------SRQPETVAVM 175

Query:   192 DWMNSVPFVMSLQLHGGNVVASYPYDS 218
              W+ +  FV+S  LHGG +VASYP+D+
Sbjct:   176 KWLKTETFVLSANLHGGALVASYPFDN 202

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0031225 "anchored to membrane" evidence=IEA

GO:0004180 "carboxypeptidase activity" evidence=TAS

GO:0009653 "anatomical structure morphogenesis" evidence=TAS

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

GO:0005737 "cytoplasm" evidence=IDA

GO:0005886 "plasma membrane" evidence=IDA

RGD|1310532 Cpm "carboxypeptidase M" [Rattus norvegicus (taxid:10116)]

 Score = 429 (156.1 bits), Expect = 5.7e-79, Sum P(2) = 5.7e-79
 Identities = 91/229 (39%), Positives = 142/229 (62%)

Query:    15 VLLRPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV- 73
             +LL   A + F  YH+ + M   L++  + Y+++T L+SIGKSV G++L V+ +  +P  
Sbjct:    10 LLLPVVAALDF-RYHHQEGMEAFLKSVAQNYSSITHLHSIGKSVRGRNLWVLVVGQSPKE 68

Query:    74 HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNP 133
             H++G+P  K V N+HGDE +GRE++L L+++LV  Y + D+ +  L+D+TRIH++P++NP
Sbjct:    69 HRVGIPEFKYVANMHGDETVGRELLLHLIDYLVTSYGK-DAEMTRLIDSTRIHIMPSMNP 127

Query:   134 DGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDW 193
             DG E   + +C    GR N NN+DLNR FPD F +N         T Q   PE  AV+ W
Sbjct:   128 DGFEAVKKPDCYYSNGRENYNNYDLNRNFPDAFENNSV-------TKQ---PETLAVMTW 177

Query:   194 MNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRH 242
             + +  FV+S  LHGG +VASYP+D+   ++   + +  L     D F+H
Sbjct:   178 LQTETFVLSANLHGGALVASYPFDNGV-QATGTLLSRSLTPD-DDVFQH 224

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA;ISO

GO:0005737 "cytoplasm" evidence=IEA;ISO

GO:0005886 "plasma membrane" evidence=IEA;ISO

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

UNIPROTKB|E1C041 CPM "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 437 (158.9 bits), Expect = 1.6e-78, Sum P(2) = 1.6e-78
 Identities = 98/230 (42%), Positives = 135/230 (58%)

Query:    14 LVLLRPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV 73
             L L+   A + +  YH+ + +   L+     Y  +T L+SIG+SV G+DL V+ +   P 
Sbjct:    12 LCLVSLVAALDY-KYHHSEELEAYLKEVHAAYPALTHLHSIGRSVEGRDLWVLVLGRFPT 70

Query:    74 -HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLN 132
              H++G+P  K V N+HGDE +GREI+L L++HLV  Y R D  I  LL+NTRIH++P +N
Sbjct:    71 QHKIGIPEFKYVANMHGDETVGREILLHLIDHLVTNYGR-DPVITRLLNNTRIHIMPTMN 129

Query:   133 PDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVID 192
             PDG E  V  +C   RGR N N  DLNR FPD F +N +N+         I PE QAVI+
Sbjct:   130 PDGFEATVVPDCYYSRGRYNKNGEDLNRNFPDAFENN-NNL---------IQPETQAVIN 179

Query:   193 WMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRH 242
             W+ +  FV+S  LHGG +VASY +D+  G S    +N        D F H
Sbjct:   180 WIKNETFVLSANLHGGALVASYTFDN--GNSVTGTSNGYSRSPDDDVFIH 227

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005886 "plasma membrane" evidence=IEA

UNIPROTKB|D4A6Z2 Cpd "Carboxypeptidase D" [Rattus norvegicus (taxid:10116)]

 Score = 413 (150.4 bits), Expect = 1.2e-77, Sum P(4) = 1.2e-77
 Identities = 86/192 (44%), Positives = 123/192 (64%)

Query:    27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVG 85
             ++H++  M   L  F   Y N+T LYS+GKSV  ++L V+ IS  P VH+ G P  K +G
Sbjct:   257 HHHHFPDMEIFLRRFANEYPNITRLYSLGKSVESRELYVMEISDNPGVHEPGEPEFKYIG 316

Query:    86 NIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR 145
             N+HG+E +GRE++L L+E+L   +   D  +  L+ +TRIHL+P++NPDG E + EG+  
Sbjct:   317 NMHGNEVVGRELLLNLIEYLCKNF-GTDPEVTDLVRSTRIHLMPSMNPDGYEKSQEGDSI 375

Query:   146 SGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 205
             S  GRNN NN DLNR FPD F      +P +   +Q   PE  AV+ W+ + PFV+S  L
Sbjct:   376 SVVGRNNSNNFDLNRNFPDQF------VP-ITDPTQ---PETIAVMSWVKAYPFVLSANL 425

Query:   206 HGGNVVASYPYD 217
             HGG++V +YPYD
Sbjct:   426 HGGSLVVNYPYD 437

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1BLR9 LOC532189 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 420 (152.9 bits), Expect = 7.6e-71, Sum P(2) = 7.6e-71
 Identities = 89/201 (44%), Positives = 123/201 (61%)

Query:    18 RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQL 76
             +P     F ++H++  M   L  F   Y N+T LYS+GKSV  ++L V+ IS  P VH+ 
Sbjct:   492 QPIQPQDF-HHHHFPDMEIFLRRFANEYPNITRLYSLGKSVESRELYVMEISDNPGVHEP 550

Query:    77 GVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGS 136
             G P  K +GN+HG+E +GRE++L L+E+L   +   D  +  L+ NTRIHL+P++NPDG 
Sbjct:   551 GEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNF-GTDPEVTDLVLNTRIHLMPSMNPDGY 609

Query:   137 ELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNS 196
             E A EG+  S  GRNN NN DLNR FPD F          V  ++   PE  AV+ WM +
Sbjct:   610 EKAQEGDLVSVIGRNNSNNFDLNRNFPDQF----------VQITEPTQPETIAVMSWMKT 659

Query:   197 VPFVMSLQLHGGNVVASYPYD 217
              PFV+S  LHGG +V +YP+D
Sbjct:   660 YPFVLSANLHGGTLVVNYPFD 680

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

MGI|MGI:107265 Cpd "carboxypeptidase D" [Mus musculus (taxid:10090)]

 Score = 413 (150.4 bits), Expect = 1.3e-76, Sum P(4) = 1.3e-76
 Identities = 85/192 (44%), Positives = 121/192 (63%)

Query:    27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVG 85
             ++H++  M   L  F   Y N+T LYS+GKSV  ++L V+ IS  P VH+ G P  K +G
Sbjct:   501 HHHHFPDMEIFLRRFANEYPNITRLYSLGKSVESRELYVMEISDNPGVHEPGEPEFKYIG 560

Query:    86 NIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR 145
             N+HG+E +GRE++L L+E+L   +   D  +  L+ +TRIHL+P++NPDG E + EG+  
Sbjct:   561 NMHGNEVVGRELLLNLIEYLCKNF-GTDPEVTDLVRSTRIHLMPSMNPDGYEKSQEGDSI 619

Query:   146 SGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 205
             S  GRNN NN DLNR FPD F          V  ++   PE  AV+ W+ + PFV+S  L
Sbjct:   620 SVVGRNNSNNFDLNRNFPDQF----------VPITEPTQPETIAVMSWVKAYPFVLSANL 669

Query:   206 HGGNVVASYPYD 217
             HGG++V +YPYD
Sbjct:   670 HGGSLVVNYPYD 681

GO:0004180 "carboxypeptidase activity" evidence=IEA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA

GO:0005634 "nucleus" evidence=ISO

GO:0005802 "trans-Golgi network" evidence=ISO

GO:0006508 "proteolysis" evidence=IEA

GO:0008233 "peptidase activity" evidence=IEA

GO:0008237 "metallopeptidase activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016020 "membrane" evidence=IEA

GO:0016021 "integral to membrane" evidence=IEA

GO:0016787 "hydrolase activity" evidence=IEA

GO:0043231 "intracellular membrane-bounded organelle" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|E2R830 CPD "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 414 (150.8 bits), Expect = 4.4e-77, Sum P(4) = 4.4e-77
 Identities = 88/192 (45%), Positives = 120/192 (62%)

Query:    27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVG 85
             ++H++  M   L  F   Y N+T LYS+GKSV  ++L V+ IS  P VH+ G P  K +G
Sbjct:   503 HHHHFPDMEIFLRRFANEYPNITRLYSLGKSVESRELYVMEISDNPGVHEPGEPEFKYIG 562

Query:    86 NIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR 145
             N+HG+E +GRE++L L+E+L   +   D  +  L+ +TRIHL+P++NPDG E A EG+  
Sbjct:   563 NMHGNEVVGRELLLNLIEYLCKNF-GTDPEVTDLVRSTRIHLMPSMNPDGYEKAQEGDSV 621

Query:   146 SGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 205
             S  GRNN NN DLNR FPD F       PT         PE  AV+ WM S PFV+S  L
Sbjct:   622 SVIGRNNSNNFDLNRNFPDQFFQITD--PT--------QPETIAVMSWMKSYPFVLSANL 671

Query:   206 HGGNVVASYPYD 217
             HGG++V +YP+D
Sbjct:   672 HGGSLVVNYPFD 683

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006508 "proteolysis" evidence=IEA

GO:0004185 "serine-type carboxypeptidase activity" evidence=IEA

GO:0004181 "metallocarboxypeptidase activity" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by EFICAz Software

Prediction Level	EC number	Confidence of Prediction
3rd Layer	3.4.17	0.691

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	651
cd03858	293	cd03858, M14_CP_N-E_like, Peptidase M14 carboxypep	1e-80
cd03858	293	cd03858, M14_CP_N-E_like, Peptidase M14 carboxypep	7e-79
cd03868	293	cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase	1e-60
cd03868	293	cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase	2e-59
smart00631	277	smart00631, Zn_pept, Zn_pept domain	3e-52
cd03866	292	cd03866, M14_CPM, Peptidase M14 carboxypeptidase s	9e-52
pfam00246	277	pfam00246, Peptidase_M14, Zinc carboxypeptidase	1e-48
cd03863	296	cd03863, M14_CPD_II, Peptidase M14 carboxypeptidas	2e-48
cd03867	315	cd03867, M14_CPZ, Peptidase M14 carboxypeptidase s	3e-48
cd06245	284	cd06245, M14_CPD_III, Peptidase M14 carboxypeptida	1e-45
cd03866	292	cd03866, M14_CPM, Peptidase M14 carboxypeptidase s	1e-44
cd03864	313	cd03864, M14_CPN, Peptidase M14 carboxypeptidase s	1e-44
cd06245	284	cd06245, M14_CPD_III, Peptidase M14 carboxypeptida	2e-43
cd03869	326	cd03869, M14_CPX_like, Peptidase M14 carboxypeptid	2e-43
cd03863	296	cd03863, M14_CPD_II, Peptidase M14 carboxypeptidas	3e-43
cd03865	323	cd03865, M14_CPE, Peptidase M14 carboxypeptidase s	3e-42
cd03867	315	cd03867, M14_CPZ, Peptidase M14 carboxypeptidase s	5e-40
cd00596	211	cd00596, Peptidase_M14_like, M14 family of metallo	4e-24
cd03859	297	cd03859, M14_CPT, Peptidase M14 Carboxypeptidase T	1e-23
cd03864	313	cd03864, M14_CPN, Peptidase M14 carboxypeptidase s	1e-21
smart00631	277	smart00631, Zn_pept, Zn_pept domain	2e-20
cd03858	293	cd03858, M14_CP_N-E_like, Peptidase M14 carboxypep	3e-20
cd03865	323	cd03865, M14_CPE, Peptidase M14 carboxypeptidase s	3e-20
pfam00246	277	pfam00246, Peptidase_M14, Zinc carboxypeptidase	1e-19
cd03869	326	cd03869, M14_CPX_like, Peptidase M14 carboxypeptid	5e-19
cd03869	326	cd03869, M14_CPX_like, Peptidase M14 carboxypeptid	2e-18
cd03865	323	cd03865, M14_CPE, Peptidase M14 carboxypeptidase s	6e-18
cd03868	293	cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase	7e-18
cd03864	313	cd03864, M14_CPN, Peptidase M14 carboxypeptidase s	1e-16
cd00596	211	cd00596, Peptidase_M14_like, M14 family of metallo	1e-15
cd11308	76	cd11308, Peptidase_M14NE-CP-C_like, Peptidase asso	1e-15
cd03866	292	cd03866, M14_CPM, Peptidase M14 carboxypeptidase s	3e-15
cd03860	293	cd03860, M14_CP_A-B_like, Peptidase M14 carboxypep	5e-14
cd06905	360	cd06905, M14-like_8, Peptidase M14-like domain; un	1e-13
cd06229	256	cd06229, M14_Endopeptidase_I, Peptidase M14 carbox	7e-13
cd03863	296	cd03863, M14_CPD_II, Peptidase M14 carboxypeptidas	1e-12
cd03867	315	cd03867, M14_CPZ, Peptidase M14 carboxypeptidase s	3e-12
pfam00246	277	pfam00246, Peptidase_M14, Zinc carboxypeptidase	4e-12
cd06226	293	cd06226, M14_CPT_like, Peptidase M14 Carboxypeptid	2e-11
cd03857	226	cd03857, M14-like_1, Peptidase M14-like domain; un	4e-11
cd06227	269	cd06227, M14-like_2, Peptidase M14-like domain; un	5e-11
smart00631	277	smart00631, Zn_pept, Zn_pept domain	1e-10
smart00631	277	smart00631, Zn_pept, Zn_pept domain	2e-10
cd06239	231	cd06239, M14-like_1_2, Peptidase M14-like domain;	3e-09
cd03859	297	cd03859, M14_CPT, Peptidase M14 Carboxypeptidase T	4e-09
cd03862	273	cd03862, M14-like_7, Peptidase M14-like domain; un	3e-08
cd06243	236	cd06243, M14-like_1_6, Peptidase M14-like domain;	2e-07
cd06234	263	cd06234, M14_Nna1_like_1, Peptidase M14-like domai	3e-07
cd06904	178	cd06904, M14_MpaA_like, Peptidase M14-like domain	5e-07
cd06905	360	cd06905, M14-like_8, Peptidase M14-like domain; un	6e-07
cd06226	293	cd06226, M14_CPT_like, Peptidase M14 Carboxypeptid	6e-07
cd06242	268	cd06242, M14-like_1_5, Peptidase M14-like domain;	1e-06
cd06245	284	cd06245, M14_CPD_III, Peptidase M14 carboxypeptida	2e-06
cd06241	266	cd06241, M14-like_1_4, Peptidase M14-like domain;	2e-06
cd00596	211	cd00596, Peptidase_M14_like, M14 family of metallo	3e-06
cd06243	236	cd06243, M14-like_1_6, Peptidase M14-like domain;	5e-06
COG2866	374	COG2866, COG2866, Predicted carboxypeptidase [Amin	2e-05
cd06246	302	cd06246, M14_CPB2, Peptidase M14 carboxypeptidase	2e-05
cd06248	303	cd06248, M14_CP_A-B_like_1, Peptidase M14 carboxyp	3e-05
cd06231	234	cd06231, M14-like_4, Peptidase M14-like domain; un	6e-05
pfam13620	81	pfam13620, CarboxypepD_reg, Carboxypeptidase regul	9e-05
cd06229	256	cd06229, M14_Endopeptidase_I, Peptidase M14 carbox	1e-04
cd03862	273	cd03862, M14-like_7, Peptidase M14-like domain; un	1e-04
cd06230	254	cd06230, M14_ASTE_ASPA_like, Peptidase M14 Succiny	1e-04
cd03856	258	cd03856, M14_Nna1_like, Peptidase M14-like domain	1e-04
cd06238	270	cd06238, M14-like_1_1, Peptidase M14-like domain;	1e-04
cd03857	226	cd03857, M14-like_1, Peptidase M14-like domain; un	3e-04
cd06238	270	cd06238, M14-like_1_1, Peptidase M14-like domain;	3e-04
cd06242	268	cd06242, M14-like_1_5, Peptidase M14-like domain;	4e-04
cd03870	301	cd03870, M14_CPA, Peptidase M14 carboxypeptidase s	4e-04
cd06239	231	cd06239, M14-like_1_2, Peptidase M14-like domain;	7e-04
cd06235	258	cd06235, M14_Nna1_like_2, Peptidase M14-like domai	7e-04
cd06234	263	cd06234, M14_Nna1_like_1, Peptidase M14-like domai	8e-04
cd03860	293	cd03860, M14_CP_A-B_like, Peptidase M14 carboxypep	0.001
pfam04952	289	pfam04952, AstE_AspA, Succinylglutamate desuccinyl	0.001
cd06227	269	cd06227, M14-like_2, Peptidase M14-like domain; un	0.003

>gnl|CDD|199842 cd03858, M14_CP_N-E_like, Peptidase M14 carboxypeptidase subfamily N/E-like

 Score =  256 bits (657), Expect = 1e-80
 Identities = 105/263 (39%), Positives = 143/263 (54%), Gaps = 54/263 (20%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E + L V+ IS  P  H+ G P  K VGN+HG+E +GRE++L L +YL   Y  GD  I 
Sbjct: 32  EGRPLWVLEISDNPGEHEPGEPEFKYVGNMHGNEVVGRELLLLLAQYLCENY-GGDPRIT 90

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----------P-------------- 389
            L+++TRIH++P++NPDG E A EG+C    GR            P              
Sbjct: 91  NLVNSTRIHIMPSMNPDGYEKAQEGDCGGVTGRANANGVDLNRNFPDLFATIYSDNEPRQ 150

Query: 390 -------------PFLISLFL---------PF-----PVTKNKPALTPDTDVFLHLASTY 422
                        PF++S  L         P+        + + + TPD DVF +LA TY
Sbjct: 151 PETKAVMKWIKSIPFVLSANLHGGALVANYPYDDTPSGTERTEYSPTPDDDVFRYLAKTY 210

Query: 423 ARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRY 482
           A  HPTMH  +PC  N    F  G+TNGAAWYS SGGM DYNYL+  C E+TLE+SCC++
Sbjct: 211 ANAHPTMHKGQPCCCNDDESFPGGITNGAAWYSVSGGMQDYNYLHTNCFEITLELSCCKF 270

Query: 483 PAPSEIPIHWRSNQNALISWLQQ 505
           P  SE+P  W  N+ AL+++++Q
Sbjct: 271 PPASELPKFWEENKEALLNYIEQ 293

Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation. Length = 293

>gnl|CDD|199842 cd03858, M14_CP_N-E_like, Peptidase M14 carboxypeptidase subfamily N/E-like

 Score =  252 bits (645), Expect = 7e-79
 Identities = 89/203 (43%), Positives = 126/203 (62%), Gaps = 9/203 (4%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGN 86
           +HNY+ +   L+   + Y N+T LYSIGKSV G+ L V+ IS  P  H+ G P  K VGN
Sbjct: 1   HHNYEELEAFLKKLNKKYPNITRLYSIGKSVEGRPLWVLEISDNPGEHEPGEPEFKYVGN 60

Query: 87  IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS 146
           +HG+E +GRE++L L ++L   Y  GD  I  L+++TRIH++P++NPDG E A EG+C  
Sbjct: 61  MHGNEVVGRELLLLLAQYLCENY-GGDPRITNLVNSTRIHIMPSMNPDGYEKAQEGDCGG 119

Query: 147 GRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 206
             GR N N  DLNR FPD F    S+       ++   PE +AV+ W+ S+PFV+S  LH
Sbjct: 120 VTGRANANGVDLNRNFPDLFATIYSD-------NEPRQPETKAVMKWIKSIPFVLSANLH 172

Query: 207 GGNVVASYPYDSFYGESKNNINN 229
           GG +VA+YPYD     ++    +
Sbjct: 173 GGALVANYPYDDTPSGTERTEYS 195

Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation. Length = 293

>gnl|CDD|199850 cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain I subgroup

 Score =  203 bits (519), Expect = 1e-60
 Identities = 94/265 (35%), Positives = 139/265 (52%), Gaps = 58/265 (21%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E +DL  + IS      + G P  K VGN+HGDE +GR++++ L +YL+  Y  GD  + 
Sbjct: 32  EGRDLWALRISDNVNSREPGRPMFKYVGNMHGDETVGRQVLIYLAQYLLENY-GGDPRVT 90

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNC----RSGRG------------------------ 386
            L++ T I+L+P++NPDG E + EG+C      GRG                        
Sbjct: 91  RLVNTTDIYLMPSMNPDGFERSQEGDCSCGGYGGRGNANNVDLNRNFPDQFEGKHVRAQE 150

Query: 387 ------------RTPPFLISLFL---------PFPVTKNKPA-----LTPDTDVFLHLAS 420
                       R+ PF++S  L         P+  + +         +PD  VF +LA 
Sbjct: 151 RQPETLAMINWIRSNPFVLSANLHGGSVVASYPYDDSSSHNECGVYSKSPDDAVFRYLAL 210

Query: 421 TYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCC 480
           TYA  HPTM   +PC  N    F++G+TNGA WY   GGM DYNYL+  C E+TLE+SCC
Sbjct: 211 TYASNHPTMRTGKPCCENE--TFKDGITNGAHWYDVPGGMQDYNYLHSNCFEITLELSCC 268

Query: 481 RYPAPSEIPIHWRSNQNALISWLQQ 505
           +YP  SE+P  W +N+ +L+++++Q
Sbjct: 269 KYPPASELPQEWNNNRESLLAYIEQ 293

The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. This Domain I family contains two contiguous surface cysteines that may become palmitoylated and target the enzyme to membranes, thus regulating intracellular trafficking. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down-regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. In D. melanogaster, the CPD variant 1B short (DmCPD1Bs) is necessary and sufficient for viability of the fruit fly. Length = 293

>gnl|CDD|199850 cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain I subgroup

 Score =  200 bits (511), Expect = 2e-59
 Identities = 84/194 (43%), Positives = 119/194 (61%), Gaps = 11/194 (5%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGN 86
           YH+YD + + L +  + Y ++  L+SIG+SV G+DL  + IS      + G P  K VGN
Sbjct: 1   YHHYDELTDLLASLEKAYPDIARLHSIGRSVEGRDLWALRISDNVNSREPGRPMFKYVGN 60

Query: 87  IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS 146
           +HGDE +GR++++ L ++L+  Y  GD  +  L++ T I+L+P++NPDG E + EG+C  
Sbjct: 61  MHGDETVGRQVLIYLAQYLLENY-GGDPRVTRLVNTTDIYLMPSMNPDGFERSQEGDCSC 119

Query: 147 G--RGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQ 204
           G   GR N NN DLNR FPD F              Q   PE  A+I+W+ S PFV+S  
Sbjct: 120 GGYGGRGNANNVDLNRNFPDQF----EGKHVRAQERQ---PETLAMINWIRSNPFVLSAN 172

Query: 205 LHGGNVVASYPYDS 218
           LHGG+VVASYPYD 
Sbjct: 173 LHGGSVVASYPYDD 186

The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. This Domain I family contains two contiguous surface cysteines that may become palmitoylated and target the enzyme to membranes, thus regulating intracellular trafficking. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down-regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. In D. melanogaster, the CPD variant 1B short (DmCPD1Bs) is necessary and sufficient for viability of the fruit fly. Length = 293

>gnl|CDD|214748 smart00631, Zn_pept, Zn_pept domain

 Score =  180 bits (460), Expect = 3e-52
 Identities = 71/214 (33%), Positives = 102/214 (47%), Gaps = 10/214 (4%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNI 87
           YH+Y+ +   L+     Y ++  L SIGKSV G+ + V+ IS    H    P + I   I
Sbjct: 1   YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISNGGSH--DKPAIFIDAGI 58

Query: 88  HGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--R 145
           H  E IG    L L+  L+  Y R D  +  LLD T I+++P LNPDG E    G+   R
Sbjct: 59  HAREWIGPATALYLINQLLENYGR-DPRVTNLLDKTDIYIVPVLNPDGYEYTHTGDRLWR 117

Query: 146 SGRGRN-NINNHDLNRQFPDYFRHNRSNIP-TLVSTSQSIDPEVQAVIDWMNS-VPFVMS 202
             R  N N    DLNR FP ++    +    T    S   +PE +AV D++ S   F + 
Sbjct: 118 KNRSPNSNCRGVDLNRNFPFHWGETGNPCSETYAGPSPFSEPETKAVRDFIRSNRRFKLY 177

Query: 203 LQLHGGNVVASYPYDSFYGESKNNINNHDLNRQF 236
           + LH  + +  YPY   Y ++    N  DL+   
Sbjct: 178 IDLHSYSQLILYPYG--YTKNDLPPNVDDLDAVA 209

Length = 277

>gnl|CDD|199848 cd03866, M14_CPM, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase M subgroup

 Score =  180 bits (458), Expect = 9e-52
 Identities = 86/204 (42%), Positives = 129/204 (63%), Gaps = 13/204 (6%)

Query: 27  NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV-HQLGVPNVKIVG 85
           NYHN   M + L++  + Y+++T L+SIG+SV G++L V+ +   P  H++G+P  K V 
Sbjct: 4   NYHNTVQMEQYLKDVNKNYSSITHLHSIGQSVEGRELWVLVLGQHPREHRIGIPEFKYVA 63

Query: 86  NIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR 145
           N+HG+E +GRE++L L+ +LV  Y   DS I  L+++TRIH++P++NPDG E A + +C 
Sbjct: 64  NMHGNEVVGRELLLHLINYLVTSY-GSDSVITRLINSTRIHIMPSMNPDGFE-ASKPDCY 121

Query: 146 SGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 205
              GR N N +DLNR FPD F  N          ++   PE +AV++W+ S  FV+S  L
Sbjct: 122 YTVGRYNKNGYDLNRNFPDAFEEN----------NEQRQPETRAVMEWLKSETFVLSANL 171

Query: 206 HGGNVVASYPYDSFYGESKNNINN 229
           HGG +VASYPYD+  G S+     
Sbjct: 172 HGGALVASYPYDNGNGGSEQQGYR 195

Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the control of peptide hormones and growth factor activity on the cell surface and in the membrane-localized degradation of extracellular proteins, for example it hydrolyses the C-terminal arginine of epidermal growth factor (EGF) resulting in des-Arg-EGF which binds to the EGF receptor (EGFR) with an equal or greater affinity than native EGF. CPM is a required processing enzyme that generates specific agonists for the B1 receptor. Length = 292

>gnl|CDD|215816 pfam00246, Peptidase_M14, Zinc carboxypeptidase

 Score =  171 bits (434), Expect = 1e-48
 Identities = 73/239 (30%), Positives = 109/239 (45%), Gaps = 18/239 (7%)

Query: 34  MREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPI 93
           +   L+     Y ++  L SIGKSV G+ LLV+ IS    H  G P V I   IH  E I
Sbjct: 1   IEAWLDALAAAYPDLVRLVSIGKSVEGRPLLVLKISK-GPHGPGKPAVLIDAGIHAREWI 59

Query: 94  GREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNI 153
           G   +L L+  L+      D  I  LLD T I+++P LNPDG E    G+    + R+N 
Sbjct: 60  GPAALLYLIRQLLSN---NDPEITRLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSNA 116

Query: 154 NNHDLNRQFPDYFRHNRSNIPTLVST----SQSIDPEVQAVIDWMNSVPFVMSLQLHGGN 209
           N  DLNR FPD +    ++      T    +   +PE +AV D++ S  F + + LHG +
Sbjct: 117 NGVDLNRNFPDLWNEVGASSNPCSETYRGPAPFSEPETRAVADFIRSYKFKLYIDLHGYS 176

Query: 210 VVASYPYDSFYGE-SKNNINNHDLNRQFPD---------YFRHNRSNIPTLVSTSQSID 258
            +  YPY   Y     ++     L +++            + +  +N  T+   S   D
Sbjct: 177 QLILYPYGYTYSSLPPDDEELKSLAKRYAKALGAMLYGTRYTYGITNGDTIYPASGGSD 235

Length = 277

>gnl|CDD|199845 cd03863, M14_CPD_II, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain II subgroup

 Score =  171 bits (434), Expect = 2e-48
 Identities = 80/191 (41%), Positives = 118/191 (61%), Gaps = 12/191 (6%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGN 86
           +H++  M   L  F   Y ++T LYS+GKSV  ++L V+ IS  P VH+ G P  K +GN
Sbjct: 8   HHHFSDMEIFLRRFANEYPSITRLYSVGKSVELRELYVMEISDNPGVHEAGEPEFKYIGN 67

Query: 87  IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS 146
           +HG+E +GRE++L L+E+L   +   D  +  L+ +TRIH++P++NPDG E + EG+   
Sbjct: 68  MHGNEVVGRELLLNLIEYLCKNF-GTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGG 126

Query: 147 GRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 206
             GRNN NN+DLNR FPD F             +    PE  AV+ W+ + PFV+S  LH
Sbjct: 127 TVGRNNSNNYDLNRNFPDQF----------FQITDPPQPETLAVMSWLKTYPFVLSANLH 176

Query: 207 GGNVVASYPYD 217
           GG++V +YP+D
Sbjct: 177 GGSLVVNYPFD 187

The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. Length = 296

>gnl|CDD|199849 cd03867, M14_CPZ, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase Z subgroup

 Score =  171 bits (435), Expect = 3e-48
 Identities = 87/205 (42%), Positives = 123/205 (60%), Gaps = 15/205 (7%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGN 86
           +H+Y  M   L+      +++   YSIG+S  G+DLLV+  S+ P  H+L  P VK +GN
Sbjct: 1   HHSYSQMVSVLKRTAARCSHIARTYSIGRSFEGRDLLVIEFSSNPGQHELLEPEVKYIGN 60

Query: 87  IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAV-EGNCR 145
           +HG+E +GRE+++ L + L  EY+ G+  I+ L++ TRIHLLP++NPDG E A  EG   
Sbjct: 61  MHGNEVLGRELLIYLAQFLCSEYLLGNQRIQTLINTTRIHLLPSMNPDGYEAAASEGAGY 120

Query: 146 SG--RGRNNINNHDLNRQFPD----YFRHNRSNIPTL--VSTSQS-----IDPEVQAVID 192
           +G   GR N  N DLNR FPD     +R  R        +    S     + PE +AV+ 
Sbjct: 121 NGWTNGRQNAQNIDLNRNFPDLTSEVYRRRRQRGARTDHIPIPDSYWFGKVAPETKAVMK 180

Query: 193 WMNSVPFVMSLQLHGGNVVASYPYD 217
           WM S+PFV+S  LHGG++V SYPYD
Sbjct: 181 WMRSIPFVLSASLHGGDLVVSYPYD 205

Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling. Length = 315

>gnl|CDD|199867 cd06245, M14_CPD_III, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain III subgroup

 Score =  163 bits (413), Expect = 1e-45
 Identities = 78/253 (30%), Positives = 118/253 (46%), Gaps = 44/253 (17%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E + +L + IS  P   +   P ++ V  IHG+ P+G E++L L E+L + Y + +  + 
Sbjct: 33  EFRHILSLEISNKPNNSEPEEPKIRFVAGIHGNAPVGTELLLALAEFLCMNYGK-NPAVT 91

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPF------------PVT 402
            L+D TRI ++P+LNPDG E A E  C S  G T      L   F            P T
Sbjct: 92  KLIDRTRIVIVPSLNPDGRERAQEKQCTSKEGHTNAHGKDLDTDFTSNASNMSADSQPET 151

Query: 403 K----------------------------NKPALTPDTD-VFLHLASTYARLHPTMHMKR 433
           K                            +KP  T +      HLA  YA  HP+MH+ +
Sbjct: 152 KAIIDNLIQKDFTLSVALDGGSVVATYPYDKPVQTVENKETLKHLAKVYANNHPSMHLGQ 211

Query: 434 P-CPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHW 492
           P CP N+      GV  GA W S  G M D++  +  C E+T+  SCC +P+ +++P  W
Sbjct: 212 PGCPNNSDENIPGGVMRGAEWNSHLGSMKDFSVDFGHCPEITVYTSCCLFPSAAQLPDLW 271

Query: 493 RSNQNALISWLQQ 505
             N+ +L+S + +
Sbjct: 272 AENKKSLLSMIVE 284

The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. Length = 284

>gnl|CDD|199848 cd03866, M14_CPM, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase M subgroup

 Score =  161 bits (408), Expect = 1e-44
 Identities = 87/260 (33%), Positives = 131/260 (50%), Gaps = 53/260 (20%)

Query: 296 ESKDLLVVNISTAPV-HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E ++L V+ +   P  H++G+P  K V N+HG+E +GRE++L L+ YLV  Y   DS I 
Sbjct: 36  EGRELWVLVLGQHPREHRIGIPEFKYVANMHGNEVVGRELLLHLINYLVTSY-GSDSVIT 94

Query: 355 FLLDNTRIHLLP--------------------------NLN---PDGSELAVEGNCRSGR 385
            L+++TRIH++P                          +LN   PD  E   E      R
Sbjct: 95  RLINSTRIHIMPSMNPDGFEASKPDCYYTVGRYNKNGYDLNRNFPDAFEENNEQRQPETR 154

Query: 386 G-----RTPPFLIS-------LFLPFPVTKNKPA--------LTPDTDVFLHLASTYARL 425
                 ++  F++S       L   +P               +TPD DVF++LA TYA  
Sbjct: 155 AVMEWLKSETFVLSANLHGGALVASYPYDNGNGGSEQQGYRSVTPDDDVFVYLAKTYAYN 214

Query: 426 HPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAP 485
           H  M+    C    +  F +G+TNG  WY   GGM DYNY++  CLE+TLE+SCC+YP  
Sbjct: 215 HTNMYRGNHCSD--LQSFPSGITNGYQWYPLQGGMQDYNYVWAQCLEITLELSCCKYPPE 272

Query: 486 SEIPIHWRSNQNALISWLQQ 505
            ++P  W +N+ +LI +++Q
Sbjct: 273 EQLPAFWEANKASLIEYIKQ 292

Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the control of peptide hormones and growth factor activity on the cell surface and in the membrane-localized degradation of extracellular proteins, for example it hydrolyses the C-terminal arginine of epidermal growth factor (EGF) resulting in des-Arg-EGF which binds to the EGF receptor (EGFR) with an equal or greater affinity than native EGF. CPM is a required processing enzyme that generates specific agonists for the B1 receptor. Length = 292

>gnl|CDD|199846 cd03864, M14_CPN, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase N subgroup

 Score =  161 bits (409), Expect = 1e-44
 Identities = 86/203 (42%), Positives = 121/203 (59%), Gaps = 13/203 (6%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGN 86
           +H YD +   L         +T +YSIG+SV G+ L V+  S  P +H+   P  K VGN
Sbjct: 1   HHRYDDLVRALFAVQNECPYITRIYSIGRSVEGRHLYVLEFSDNPGIHEPLEPEFKYVGN 60

Query: 87  IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAV-EGNCR 145
           +HG+E +GRE++++L E L  EY  G+  I  L+ +TRIH+LP++NPDG E+A  +G   
Sbjct: 61  MHGNEVLGRELLIQLSEFLCEEYRNGNERITRLIHDTRIHILPSMNPDGYEVAARQGPEF 120

Query: 146 SGR--GRNNINNHDLNRQFPD-----YF--RHNRSN--IPTLVSTSQSIDPEVQAVIDWM 194
           +G   GRNN N  DLNR FPD     Y+  ++   N  +P   +    ++PE  AVI WM
Sbjct: 121 NGYLVGRNNANGVDLNRNFPDLNTLMYYNEKYGGPNHHLPLPDNWKSQVEPETLAVIQWM 180

Query: 195 NSVPFVMSLQLHGGNVVASYPYD 217
            +  FV+S  LHGG VVA+YPYD
Sbjct: 181 QNYNFVLSANLHGGAVVANYPYD 203

Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates include peptides found in the bloodstream, such as kinins (e.g. bradykinin, kalinin, met-lys-bradykinin), complement anaphylatoxins and creatine kinase MM (CK-MM). By removing just one amino acid, CPN can alter peptide activity and receptor binding. For example Bradykinin, a nine-residue peptide released from kiningen in response to tissue injury which is inactivated by CPN, anaphylatoxins which are regulated by CPN by the cleaving and removal of their C-terminal arginines resulting in a reduction in their biological activities of 10-100-fold, and creatine kinase MM, a cytosolic enzyme that catalyzes the reversible transfer of a phosphate group from ATP to creatine, and is regulated by CPN by the cleavage of C-terminal lysines. Like the other N/E subfamily members, two surface loops surrounding the active-site groove restrict access to the catalytic center, thus restricting larger protein carboxypeptidase inhibitors from inhibiting CPN. Length = 313

>gnl|CDD|199867 cd06245, M14_CPD_III, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain III subgroup

 Score =  156 bits (397), Expect = 2e-43
 Identities = 71/192 (36%), Positives = 106/192 (55%), Gaps = 12/192 (6%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGN 86
           YH+Y  + E L      Y ++T L S+G+SV  + +L + IS  P   +   P ++ V  
Sbjct: 2   YHSYKELSEFLRGLVLNYPHITNLTSLGQSVEFRHILSLEISNKPNNSEPEEPKIRFVAG 61

Query: 87  IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS 146
           IHG+ P+G E++L L E L + Y + +  +  L+D TRI ++P+LNPDG E A E  C S
Sbjct: 62  IHGNAPVGTELLLALAEFLCMNYGK-NPAVTKLIDRTRIVIVPSLNPDGRERAQEKQCTS 120

Query: 147 GRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 206
             G  N +  DL+  F        SN   + + SQ   PE +A+ID +    F +S+ L 
Sbjct: 121 KEGHTNAHGKDLDTDF-------TSNASNMSADSQ---PETKAIIDNLIQKDFTLSVALD 170

Query: 207 GGNVVASYPYDS 218
           GG+VVA+YPYD 
Sbjct: 171 GGSVVATYPYDK 182

The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. Length = 284

>gnl|CDD|199851 cd03869, M14_CPX_like, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase X subgroup

 Score =  158 bits (401), Expect = 2e-43
 Identities = 80/211 (37%), Positives = 113/211 (53%), Gaps = 21/211 (9%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV-HQLGVPNVKIVGN 86
           +HNY  MR+ ++       N+T +YSIGKS  G  L  + IS  P  H+LG P  +    
Sbjct: 5   HHNYKDMRQLMKVVNEECPNITRIYSIGKSYQGLKLYAMEISDNPGEHELGEPEFRYTAG 64

Query: 87  IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS 146
           +HG+E +GRE++L L++ L  EY+ G+  +  L++ TRIHLLP+LNPDG E A E     
Sbjct: 65  MHGNEVLGRELLLLLMQFLCQEYLDGNPRVVHLVEETRIHLLPSLNPDGYEKAYEMGSEL 124

Query: 147 G---RGRNNINNHDLNRQFPD-----YFRHNRSNIPTLV------------STSQSIDPE 186
           G    GR      D+N  FPD     +    +  +P  V            S + ++ PE
Sbjct: 125 GGWALGRWTEEGIDINHNFPDLNTILWEAEEKKWVPRKVPNHHIPIPEWYLSPNATVAPE 184

Query: 187 VQAVIDWMNSVPFVMSLQLHGGNVVASYPYD 217
            +AVI WM  +PFV+   L GG +V SYPYD
Sbjct: 185 TRAVIAWMEKIPFVLGANLQGGELVVSYPYD 215

Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Proteins in this subgroup also contain an N-terminal discoidin domain. The CP domain is important for the function of AEBP1 as a transcriptional repressor. AEBP1 is involved in several biological processes including adipogenesis, macrophage cholesterol homeostasis, and inflammation. In macrophages, AEBP1 promotes the expression of IL-6, TNF-alpha, MCP-1, and iNOS whose expression is tightly regulated by NF-kappaB activity. ACLP, a secreted protein that associates with the extracellular matrix, is essential for abdominal wall development and contributes to dermal wound healing. Length = 326

>gnl|CDD|199845 cd03863, M14_CPD_II, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain II subgroup

 Score =  157 bits (397), Expect = 3e-43
 Identities = 84/259 (32%), Positives = 135/259 (52%), Gaps = 50/259 (19%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E ++L V+ IS  P VH+ G P  K +GN+HG+E +GRE++L L+EYL   +   D  + 
Sbjct: 39  ELRELYVMEISDNPGVHEAGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNF-GTDPEVT 97

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGR--------------------------- 387
            L+ +TRIH++P++NPDG E + EG+     GR                           
Sbjct: 98  DLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQITDPPQPET 157

Query: 388 --------TPPFLIS-------LFLPFPVTKNKPAL-----TPDTDVFLHLASTYARLHP 427
                   T PF++S       L + +P   ++  +     +PD  VF  LA +Y++ + 
Sbjct: 158 LAVMSWLKTYPFVLSANLHGGSLVVNYPFDDDEQGIAIYSKSPDDAVFQQLALSYSKENS 217

Query: 428 TMHMKRPCPGNTVLK-FENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPS 486
            M+   PC      + F +G+TNGA WY+  GGM D+NYL   C E+T+E+ C +YP   
Sbjct: 218 KMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKAE 277

Query: 487 EIPIHWRSNQNALISWLQQ 505
           E+P +W  N+ +L+ +++Q
Sbjct: 278 ELPKYWEQNRRSLLQFIKQ 296

The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. Length = 296

>gnl|CDD|199847 cd03865, M14_CPE, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase E subgroup

 Score =  155 bits (392), Expect = 3e-42
 Identities = 82/207 (39%), Positives = 123/207 (59%), Gaps = 17/207 (8%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGN 86
           YH Y  +RE L +      +++ +Y++G+S  G++LLV+ +S  P  H+ G P  K VGN
Sbjct: 5   YHRYPELREALVSVWLQCPSISRIYTVGRSFEGRELLVIEMSDNPGEHEPGEPEFKYVGN 64

Query: 87  IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE--GNC 144
           +HG+E +GRE+++ L ++L  EY +G+  I  L+ +TRIH++P+LNPDG E A    G  
Sbjct: 65  MHGNEAVGRELLIYLAQYLCNEYQKGNETIINLIHSTRIHIMPSLNPDGFEKAASQPGEL 124

Query: 145 RSG-RGRNNINNHDLNRQFPDYFR-------------HNRSNIPTLVSTSQSIDPEVQAV 190
           +    GR+N    DLNR FPD  R             H   N+   V  +  + PE +AV
Sbjct: 125 KDWFVGRSNAQGIDLNRNFPDLDRIVYVNEREGGPNNHLLKNMKKAVDENTKLAPETKAV 184

Query: 191 IDWMNSVPFVMSLQLHGGNVVASYPYD 217
           I W+  +PFV+S  LHGG++VA+YPYD
Sbjct: 185 IHWIMDIPFVLSANLHGGDLVANYPYD 211

Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine peptides that result in obesity and hyperglycemia. Reduced CPE enzyme and receptor activity could underlie abnormal placental phenotypes from the observation that CPE is down-regulated in enlarged placentas of interspecific hybrid (interspecies hybrid placental dysplasia, IHPD) and cloned mice. Length = 323

>gnl|CDD|199849 cd03867, M14_CPZ, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase Z subgroup

 Score =  148 bits (376), Expect = 5e-40
 Identities = 89/283 (31%), Positives = 132/283 (46%), Gaps = 74/283 (26%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E +DLLV+  S+ P  H+L  P VK +GN+HG+E +GRE+++ L ++L  EY+ G+  I+
Sbjct: 32  EGRDLLVIEFSSNPGQHELLEPEVKYIGNMHGNEVLGRELLIYLAQFLCSEYLLGNQRIQ 91

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCR-----SGR--------GRTPPFLISLF----- 396
            L++ TRIHLLP++NPDG E A           +GR         R  P L S       
Sbjct: 92  TLINTTRIHLLPSMNPDGYEAAASEGAGYNGWTNGRQNAQNIDLNRNFPDLTSEVYRRRR 151

Query: 397 --------LPFPVTKNKPALTPDTDVF--------------LH---LASTYA---RLHP- 427
                   +P P +     + P+T                 LH   L  +Y      HP 
Sbjct: 152 QRGARTDHIPIPDSYWFGKVAPETKAVMKWMRSIPFVLSASLHGGDLVVSYPYDFSRHPL 211

Query: 428 TMHMKRPCPGNTVLKF--------------------------ENGVTNGAAWYSFSGGMA 461
              M  P P   V K                             G+ NGA WYSFSGGM+
Sbjct: 212 EEKMFSPTPDEKVFKMLARTYADAHPTMSDRSTRRCGGNFHKRGGIINGAEWYSFSGGMS 271

Query: 462 DYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQ 504
           D+NYL+  C E+T+E+ C ++P   E+ + W+ N+ AL+S+++
Sbjct: 272 DFNYLHTNCFEVTVELGCDKFPPEEELYLIWQENKEALLSFME 314

Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling. Length = 315

>gnl|CDD|199839 cd00596, Peptidase_M14_like, M14 family of metallocarboxypeptidases and related proteins

 Score =  100 bits (251), Expect = 4e-24
 Identities = 48/145 (33%), Positives = 68/145 (46%), Gaps = 11/145 (7%)

Query: 81  VKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAV 140
           V I+  IHG+E IG E+ L LLEHL+        N   LLDN R+ ++PN+NPDG     
Sbjct: 1   VLIIAGIHGNEVIGVEVALLLLEHLL----ANYGNDTALLDNRRLWIVPNVNPDGIARVQ 56

Query: 141 EGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFV 200
            G       R N N  DLNR FP  +    +          S +PE +A+   +    F 
Sbjct: 57  RGW------RGNANGVDLNRNFPGIWGKRGAPETYGGPAPLS-EPETRALAALIKQRKFD 109

Query: 201 MSLQLHGGNVVASYPYDSFYGESKN 225
           + + LH G++   YPY     +  +
Sbjct: 110 LVINLHSGSLAILYPYGHSDNDPDD 134

The M14 family of metallocarboxypeptidases (MCPs), also known as funnelins, are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 211

>gnl|CDD|199843 cd03859, M14_CPT, Peptidase M14 Carboxypeptidase T subfamily

 Score =  101 bits (253), Expect = 1e-23
 Identities = 63/214 (29%), Positives = 95/214 (44%), Gaps = 23/214 (10%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNI 87
           YHNY  M +EL      Y N+ ++ SIGKS  G+D+  V IS  P      P V      
Sbjct: 4   YHNYLEMVDELNAAAAAYPNLVKVKSIGKSYEGRDIWAVKISDNPATDENKPEVLYTSTH 63

Query: 88  HGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAV-EGNCRS 146
           H  E +  E+ + L+++L+  Y   D  I+ L+D+  +  +P +NPDG E     G+ RS
Sbjct: 64  HAREWLSLEMAIYLIKYLLENYGT-DPRIQNLVDSRELWFVPVVNPDGYEYDEATGSYRS 122

Query: 147 GRG--RNNINNH------DLNRQFPDYFRHNR----SNIPTLVSTSQSI---DPEVQAVI 191
            R   R N  +       DLNR +  Y         S+ P+  +        +PE QA+ 
Sbjct: 123 WRKNRRPNSGDISSSDGVDLNRNY-GYKWGCDSGGSSSDPSSETYRGPSAFSEPETQAIR 181

Query: 192 DWMNSVP-FVMSLQLH--GGNVVASYPYDSFYGE 222
           D++ S      ++  H      +  YPY   Y E
Sbjct: 182 DFVESHVNIKTAINYHTYSNLWL--YPYGYTYNE 213

Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor. Length = 297

>gnl|CDD|199846 cd03864, M14_CPN, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase N subgroup

 Score = 95.8 bits (238), Expect = 1e-21
 Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 4/97 (4%)

Query: 409 TPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYH 468
           TPD  +F  LA TY+  H  MH    C       F+ G+TNGA+WYS S GM D+NYL+ 
Sbjct: 221 TPDDKLFQKLAKTYSYAHGWMHKGWNCGD----YFDEGITNGASWYSLSKGMQDFNYLHT 276

Query: 469 GCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQ 505
            C E+TLE+SC ++P   E+   W +N+ ALIS+++Q
Sbjct: 277 NCFEITLELSCDKFPPEEELEREWLANREALISYIEQ 313

Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates include peptides found in the bloodstream, such as kinins (e.g. bradykinin, kalinin, met-lys-bradykinin), complement anaphylatoxins and creatine kinase MM (CK-MM). By removing just one amino acid, CPN can alter peptide activity and receptor binding. For example Bradykinin, a nine-residue peptide released from kiningen in response to tissue injury which is inactivated by CPN, anaphylatoxins which are regulated by CPN by the cleaving and removal of their C-terminal arginines resulting in a reduction in their biological activities of 10-100-fold, and creatine kinase MM, a cytosolic enzyme that catalyzes the reversible transfer of a phosphate group from ATP to creatine, and is regulated by CPN by the cleavage of C-terminal lysines. Like the other N/E subfamily members, two surface loops surrounding the active-site groove restrict access to the catalytic center, thus restricting larger protein carboxypeptidase inhibitors from inhibiting CPN. Length = 313

>gnl|CDD|214748 smart00631, Zn_pept, Zn_pept domain

 Score = 91.2 bits (227), Expect = 2e-20
 Identities = 33/95 (34%), Positives = 46/95 (48%), Gaps = 3/95 (3%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E + + V+ IS    H    P + I   IH  E IG    L L+  L+  Y R D  +  
Sbjct: 32  EGRPIWVLKISNGGSH--DKPAIFIDAGIHAREWIGPATALYLINQLLENYGR-DPRVTN 88

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPP 390
           LLD T I+++P LNPDG E    G+    + R+P 
Sbjct: 89  LLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPN 123

Length = 277

>gnl|CDD|199842 cd03858, M14_CP_N-E_like, Peptidase M14 carboxypeptidase subfamily N/E-like

 Score = 91.1 bits (227), Expect = 3e-20
 Identities = 32/82 (39%), Positives = 44/82 (53%), Gaps = 7/82 (8%)

Query: 212 ASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV 271
            +   D      + N N  DLNR FPD F    S+       ++   PE +AV+ W+ S+
Sbjct: 111 KAQEGDCGGVTGRANANGVDLNRNFPDLFATIYSD-------NEPRQPETKAVMKWIKSI 163

Query: 272 PFVMSLQLHGGNVVASYPYDSF 293
           PFV+S  LHGG +VA+YPYD  
Sbjct: 164 PFVLSANLHGGALVANYPYDDT 185

Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages that would otherwise damage the cell. In addition, all members of the N/E subfamily contain an extra C-terminal domain that is not present in the A/B subfamily. This domain has structural homology to transthyretin and other proteins and has been proposed to function as a folding domain. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation. Length = 293

>gnl|CDD|199847 cd03865, M14_CPE, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase E subgroup

 Score = 92.0 bits (228), Expect = 3e-20
 Identities = 40/99 (40%), Positives = 60/99 (60%), Gaps = 3/99 (3%)

Query: 410 PDTDVFLHLASTYARLHPTMH--MKRPCPGNTV-LKFENGVTNGAAWYSFSGGMADYNYL 466
           PD  +F  LA  Y+ L+P M    + PC  N     F +G TNG AWYS  GGM D+NYL
Sbjct: 225 PDDAIFKSLARAYSSLNPAMSDPNRPPCRKNDDDSSFVDGTTNGGAWYSVPGGMQDFNYL 284

Query: 467 YHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQ 505
              C E+T+E+SC ++P    +  +W  N+N+L+++++Q
Sbjct: 285 SSNCFEITVELSCDKFPPEETLKQYWEDNKNSLVNYIEQ 323

Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine peptides that result in obesity and hyperglycemia. Reduced CPE enzyme and receptor activity could underlie abnormal placental phenotypes from the observation that CPE is down-regulated in enlarged placentas of interspecific hybrid (interspecies hybrid placental dysplasia, IHPD) and cloned mice. Length = 323

>gnl|CDD|215816 pfam00246, Peptidase_M14, Zinc carboxypeptidase

 Score = 89.3 bits (222), Expect = 1e-19
 Identities = 35/95 (36%), Positives = 46/95 (48%), Gaps = 4/95 (4%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E + LLV+ IS    H  G P V I   IH  E IG   +L L+  L+      D  I  
Sbjct: 26  EGRPLLVLKISK-GPHGPGKPAVLIDAGIHAREWIGPAALLYLIRQLLSN---NDPEITR 81

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPP 390
           LLD T I+++P LNPDG E    G+    + R+  
Sbjct: 82  LLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSNA 116

Length = 277

>gnl|CDD|199851 cd03869, M14_CPX_like, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase X subgroup

 Score = 88.4 bits (219), Expect = 5e-19
 Identities = 38/99 (38%), Positives = 62/99 (62%), Gaps = 3/99 (3%)

Query: 409 TPDTDVFLHLASTYARLHPTMH--MKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYL 466
           TPD  VF  LA++YA  H TM    +R C      K E G+ NGA+W++ +G M D++YL
Sbjct: 229 TPDDAVFRWLATSYASTHLTMTDPSRRVCHTEDFQK-EMGIVNGASWHTVAGSMNDFSYL 287

Query: 467 YHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQ 505
           +  C EL++ + C ++P  SE+P  W +N+ +L+ +++Q
Sbjct: 288 HTNCFELSVYLGCDKFPHESELPEEWENNKESLLVFMEQ 326

Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Proteins in this subgroup also contain an N-terminal discoidin domain. The CP domain is important for the function of AEBP1 as a transcriptional repressor. AEBP1 is involved in several biological processes including adipogenesis, macrophage cholesterol homeostasis, and inflammation. In macrophages, AEBP1 promotes the expression of IL-6, TNF-alpha, MCP-1, and iNOS whose expression is tightly regulated by NF-kappaB activity. ACLP, a secreted protein that associates with the extracellular matrix, is essential for abdominal wall development and contributes to dermal wound healing. Length = 326

>gnl|CDD|199851 cd03869, M14_CPX_like, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase X subgroup

 Score = 86.8 bits (215), Expect = 2e-18
 Identities = 36/81 (44%), Positives = 53/81 (65%), Gaps = 1/81 (1%)

Query: 300 LLVVNISTAPV-HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLD 358
           L  + IS  P  H+LG P  +    +HG+E +GRE++L L+++L  EY+ G+  +  L++
Sbjct: 40  LYAMEISDNPGEHELGEPEFRYTAGMHGNEVLGRELLLLLMQFLCQEYLDGNPRVVHLVE 99

Query: 359 NTRIHLLPNLNPDGSELAVEG 379
            TRIHLLP+LNPDG E A E 
Sbjct: 100 ETRIHLLPSLNPDGYEKAYEM 120

Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Proteins in this subgroup also contain an N-terminal discoidin domain. The CP domain is important for the function of AEBP1 as a transcriptional repressor. AEBP1 is involved in several biological processes including adipogenesis, macrophage cholesterol homeostasis, and inflammation. In macrophages, AEBP1 promotes the expression of IL-6, TNF-alpha, MCP-1, and iNOS whose expression is tightly regulated by NF-kappaB activity. ACLP, a secreted protein that associates with the extracellular matrix, is essential for abdominal wall development and contributes to dermal wound healing. Length = 326

>gnl|CDD|199847 cd03865, M14_CPE, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase E subgroup

 Score = 85.1 bits (210), Expect = 6e-18
 Identities = 39/84 (46%), Positives = 58/84 (69%), Gaps = 1/84 (1%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E ++LLV+ +S  P  H+ G P  K VGN+HG+E +GRE+++ L +YL  EY +G+  I 
Sbjct: 36  EGRELLVIEMSDNPGEHEPGEPEFKYVGNMHGNEAVGRELLIYLAQYLCNEYQKGNETII 95

Query: 355 FLLDNTRIHLLPNLNPDGSELAVE 378
            L+ +TRIH++P+LNPDG E A  
Sbjct: 96  NLIHSTRIHIMPSLNPDGFEKAAS 119

Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3.4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine peptides that result in obesity and hyperglycemia. Reduced CPE enzyme and receptor activity could underlie abnormal placental phenotypes from the observation that CPE is down-regulated in enlarged placentas of interspecific hybrid (interspecies hybrid placental dysplasia, IHPD) and cloned mice. Length = 323

>gnl|CDD|199850 cd03868, M14_CPD_I, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain I subgroup

 Score = 84.3 bits (209), Expect = 7e-18
 Identities = 34/69 (49%), Positives = 40/69 (57%), Gaps = 7/69 (10%)

Query: 224 KNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGN 283
           + N NN DLNR FPD F              Q   PE  A+I+W+ S PFV+S  LHGG+
Sbjct: 125 RGNANNVDLNRNFPDQF----EGKHVRAQERQ---PETLAMINWIRSNPFVLSANLHGGS 177

Query: 284 VVASYPYDS 292
           VVASYPYD 
Sbjct: 178 VVASYPYDD 186

The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. This Domain I family contains two contiguous surface cysteines that may become palmitoylated and target the enzyme to membranes, thus regulating intracellular trafficking. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down-regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. In D. melanogaster, the CPD variant 1B short (DmCPD1Bs) is necessary and sufficient for viability of the fruit fly. Length = 293

>gnl|CDD|199846 cd03864, M14_CPN, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase N subgroup

 Score = 81.1 bits (200), Expect = 1e-16
 Identities = 37/82 (45%), Positives = 56/82 (68%), Gaps = 1/82 (1%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E + L V+  S  P +H+   P  K VGN+HG+E +GRE++++L E+L  EY  G+  I 
Sbjct: 32  EGRHLYVLEFSDNPGIHEPLEPEFKYVGNMHGNEVLGRELLIQLSEFLCEEYRNGNERIT 91

Query: 355 FLLDNTRIHLLPNLNPDGSELA 376
            L+ +TRIH+LP++NPDG E+A
Sbjct: 92  RLIHDTRIHILPSMNPDGYEVA 113

Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3.4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates include peptides found in the bloodstream, such as kinins (e.g. bradykinin, kalinin, met-lys-bradykinin), complement anaphylatoxins and creatine kinase MM (CK-MM). By removing just one amino acid, CPN can alter peptide activity and receptor binding. For example Bradykinin, a nine-residue peptide released from kiningen in response to tissue injury which is inactivated by CPN, anaphylatoxins which are regulated by CPN by the cleaving and removal of their C-terminal arginines resulting in a reduction in their biological activities of 10-100-fold, and creatine kinase MM, a cytosolic enzyme that catalyzes the reversible transfer of a phosphate group from ATP to creatine, and is regulated by CPN by the cleavage of C-terminal lysines. Like the other N/E subfamily members, two surface loops surrounding the active-site groove restrict access to the catalytic center, thus restricting larger protein carboxypeptidase inhibitors from inhibiting CPN. Length = 313

>gnl|CDD|199839 cd00596, Peptidase_M14_like, M14 family of metallocarboxypeptidases and related proteins

 Score = 75.6 bits (186), Expect = 1e-15
 Identities = 58/216 (26%), Positives = 81/216 (37%), Gaps = 39/216 (18%)

Query: 318 VKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDG---SE 374
           V I+  IHG+E IG E+ L LLE+L+        N   LLDN R+ ++PN+NPDG    +
Sbjct: 1   VLIIAGIHGNEVIGVEVALLLLEHLL----ANYGNDTALLDNRRLWIVPNVNPDGIARVQ 56

Query: 375 LAVEGNCR-----------SGRGRTPPFLISLFLPF-PVTKNKPAL----TPDTDVFLHL 418
               GN              G+   P           P T+   AL      D  + LH 
Sbjct: 57  RGWRGNANGVDLNRNFPGIWGKRGAPETYGGPAPLSEPETRALAALIKQRKFDLVINLHS 116

Query: 419 ASTYARLHPTMHMKRPCPGNTVLK--------------FENGVTNGAAWYSFSGGMADYN 464
            S    L+P  H        +  K               + GV       +  GG  D+ 
Sbjct: 117 GSLAI-LYPYGHSDNDPDDFSNPKEIAQSLAIAADKHGGKEGVGFIVQEKATQGGFEDWA 175

Query: 465 YLYHGCLELTLEISCCRYPAPSE-IPIHWRSNQNAL 499
           Y  HG L  T+E+     P  +E   +  + N  AL
Sbjct: 176 YDNHGKLAFTVELGKGIPPLFAEKFFLRLKRNDEAL 211

The M14 family of metallocarboxypeptidases (MCPs), also known as funnelins, are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 211

>gnl|CDD|200604 cd11308, Peptidase_M14NE-CP-C_like, Peptidase associated domain: C-terminal domain of M14 N/E carboxypeptidase; putative folding, regulation, or interaction domain

 Score = 71.8 bits (177), Expect = 1e-15
 Identities = 27/71 (38%), Positives = 43/71 (60%)

Query: 509 GVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDR 568
           G+KG V D TG+ +AN +IS+   N    +++ G+YWR+L+PG Y + AS  GY+     
Sbjct: 1   GIKGFVTDATGNPIANATISVEGINHDVTTAKDGDYWRLLLPGTYNVTASAPGYQPVTKT 60

Query: 569 IKIPESTSPVV 579
           + +P + S  V
Sbjct: 61  VTVPNNFSATV 71

This domain is found C-terminal to the M14 carboxypeptidase (CP) N/E subfamily containing zinc-binding enzymes that hydrolyze single C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes enzymatically active members (carboxypeptidase N, E, M, D, and Z), as well as non-active members (carboxypeptidase-like protein 1, -2, aortic CP-like protein, and adipocyte enhancer binding protein-1) which lack the critical active site and substrate-binding residues considered necessary for activity. The active N/E enzymes fulfill a variety of cellular functions, including prohormone processing, regulation of peptide hormone activity, alteration of protein-protein or protein-cell interactions and transcriptional regulation. For M14 CPs, it has been suggested that this domain may assist in folding of the CP domain, regulate enzyme activity, or be involved in interactions with other proteins or with membranes; for carboxypeptidase M, it may interact with the bradykinin 1 receptor at the cell surface. This domain may also be found in other peptidase families. Length = 76

>gnl|CDD|199848 cd03866, M14_CPM, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase M subgroup

 Score = 76.5 bits (188), Expect = 3e-15
 Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 14/122 (11%)

Query: 179 TSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPD 238
           TS   D  +  +I+  ++   +M   ++     AS P D +Y   + N N +DLNR FPD
Sbjct: 85  TSYGSDSVITRLIN--STRIHIMP-SMNPDGFEASKP-DCYYTVGRYNKNGYDLNRNFPD 140

Query: 239 YFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESK 298
            F  N          ++   PE +AV++W+ S  FV+S  LHGG +VASYPYD+  G S+
Sbjct: 141 AFEEN----------NEQRQPETRAVMEWLKSETFVLSANLHGGALVASYPYDNGNGGSE 190

Query: 299 DL 300
             
Sbjct: 191 QQ 192

Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the control of peptide hormones and growth factor activity on the cell surface and in the membrane-localized degradation of extracellular proteins, for example it hydrolyses the C-terminal arginine of epidermal growth factor (EGF) resulting in des-Arg-EGF which binds to the EGF receptor (EGFR) with an equal or greater affinity than native EGF. CPM is a required processing enzyme that generates specific agonists for the B1 receptor. Length = 292

>gnl|CDD|199844 cd03860, M14_CP_A-B_like, Peptidase M14 carboxypeptidase subfamily A/B-like

 Score = 72.6 bits (179), Expect = 5e-14
 Identities = 59/226 (26%), Positives = 96/226 (42%), Gaps = 36/226 (15%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNI 87
           YH YD +   L+   + Y ++  + +IG+S  G+ +  + IS         P + I   I
Sbjct: 1   YHTYDEIYAWLDELAQKYPDLVTVETIGRSYEGRPIKGLKISNGGRS--NKPAIFIDAGI 58

Query: 88  HGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSG 147
           H  E I     L ++  LV  Y   D  +  LLDN   +++P +NPDG E     + R  
Sbjct: 59  HAREWISPATALYIINQLVESY---DPEVTELLDNYDWYIVPVVNPDGYEYTHTTD-RLW 114

Query: 148 R-GRNNINNH----DLNRQFPDYFRHNRSNIPTLVSTSQ-SID---------PEVQAVID 192
           R  R+         DLNR F  ++    +      S++  S           PE +AV D
Sbjct: 115 RKNRSPNGGGCVGVDLNRNFDFHWGGEGA------SSNPCSETYAGPSAFSEPETRAVRD 168

Query: 193 WMNSVP--FVMSLQLHG-GNVVASYPYDSFYGESKNNINNH-DLNR 234
           ++ S+     + L LH  G ++  YP    +G +     N+ DL+ 
Sbjct: 169 FLLSLAGRIKLYLSLHSYGQLI-LYP----WGYTTELPPNYEDLHE 209

The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the pancreas. The A forms have slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA3 is found in secretory granules of mast cells and functions in inflammatory processes. CPA4 is detected in hormone-regulated tissues, and is thought to play a role in prostate cancer. CPA5 is present in discrete regions of pituitary and other tissues, and cleaves aliphatic C-terminal residues. CPA6 is highly expressed in embryonic brain and optic muscle, suggesting that it may play a specific role in cell migration and axonal guidance. CPU (also called CPB2) is produced and secreted by the liver as the inactive precursor, PCPU, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). Little is known about CPO but it has been suggested to have specificity for acidic residues. Length = 293

>gnl|CDD|199875 cd06905, M14-like_8, Peptidase M14-like domain; uncharacterized subfamily

 Score = 72.4 bits (178), Expect = 1e-13
 Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 6/118 (5%)

Query: 25  FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKD---LLVVNISTAPVHQLGVPNV 81
           F  Y+ YD +   L+ +   Y ++  L SIGKS  G+D   L + N +T P      P  
Sbjct: 1   FDRYYRYDELTAFLQAWASAYPHLISLESIGKSYEGRDIWLLTLTNQATGP--AREKPAF 58

Query: 82  KIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELA 139
            I  NIH  E  G  + L ++ HL+  Y   D  +  LLD    ++LP +NPDG+E A
Sbjct: 59  WIDANIHASEVAGSAVALYVIAHLLNGYGS-DPEVTRLLDGVTFYILPRINPDGAEQA 115

A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 360

>gnl|CDD|199855 cd06229, M14_Endopeptidase_I, Peptidase M14 carboxypeptidase family-like domain of Endopeptidase I

 Score = 68.5 bits (168), Expect = 7e-13
 Identities = 40/178 (22%), Positives = 65/178 (36%), Gaps = 35/178 (19%)

Query: 57  SVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVV-----EYIR 111
           SVLG+++  V +   P        V    + H  E I   ++++ LE         E +R
Sbjct: 1   SVLGRNIYEVQLGNGPKT------VFYNASFHAREWITTLLLMKFLEDYARAYECGEKLR 54

Query: 112 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRN-----------------NIN 154
           G  +IR LL+N  + ++P +NPDG E++  G                          N  
Sbjct: 55  G-YDIRDLLENVTLCIVPMVNPDGVEISQNGPYAIRNYYLELLVINAGSIDFKEWKANAR 113

Query: 155 NHDLNRQFP-DYFRHNRSNIPTLVSTSQS-----IDPEVQAVIDWMNSVPFVMSLQLH 206
             DLNR FP  +              +        +PE +A+ ++     F   L  H
Sbjct: 114 GVDLNRNFPAGWELEKARGPKAPSPRNYGGEYPLSEPETKALAEFTRENRFRAVLAFH 171

Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments. Length = 256

>gnl|CDD|199845 cd03863, M14_CPD_II, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain II subgroup

 Score = 68.5 bits (167), Expect = 1e-12
 Identities = 29/68 (42%), Positives = 40/68 (58%), Gaps = 10/68 (14%)

Query: 224 KNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGN 283
           +NN NN+DLNR FPD F             +    PE  AV+ W+ + PFV+S  LHGG+
Sbjct: 130 RNNSNNYDLNRNFPDQF----------FQITDPPQPETLAVMSWLKTYPFVLSANLHGGS 179

Query: 284 VVASYPYD 291
           +V +YP+D
Sbjct: 180 LVVNYPFD 187

The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. Length = 296

>gnl|CDD|199849 cd03867, M14_CPZ, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase Z subgroup

 Score = 68.0 bits (166), Expect = 3e-12
 Identities = 33/79 (41%), Positives = 43/79 (54%), Gaps = 11/79 (13%)

Query: 224 KNNINNHDLNRQFPD----YFRHNRSNIPTL--VSTSQS-----IDPEVQAVIDWMNSVP 272
           + N  N DLNR FPD     +R  R        +    S     + PE +AV+ WM S+P
Sbjct: 127 RQNAQNIDLNRNFPDLTSEVYRRRRQRGARTDHIPIPDSYWFGKVAPETKAVMKWMRSIP 186

Query: 273 FVMSLQLHGGNVVASYPYD 291
           FV+S  LHGG++V SYPYD
Sbjct: 187 FVLSASLHGGDLVVSYPYD 205

Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling. Length = 315

>gnl|CDD|215816 pfam00246, Peptidase_M14, Zinc carboxypeptidase

 Score = 67.0 bits (164), Expect = 4e-12
 Identities = 25/91 (27%), Positives = 44/91 (48%), Gaps = 4/91 (4%)

Query: 210 VVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVST----SQSIDPEVQAVI 265
              ++  D  + ++++N N  DLNR FPD +    ++      T    +   +PE +AV 
Sbjct: 99  YEYTHTGDRLWRKNRSNANGVDLNRNFPDLWNEVGASSNPCSETYRGPAPFSEPETRAVA 158

Query: 266 DWMNSVPFVMSLQLHGGNVVASYPYDSFYGE 296
           D++ S  F + + LHG + +  YPY   Y  
Sbjct: 159 DFIRSYKFKLYIDLHGYSQLILYPYGYTYSS 189

Length = 277

>gnl|CDD|133084 cd06226, M14_CPT_like, Peptidase M14 Carboxypeptidase T-like subfamily

 Score = 65.1 bits (159), Expect = 2e-11
 Identities = 44/180 (24%), Positives = 75/180 (41%), Gaps = 32/180 (17%)

Query: 45  YANMTELYSIGKS------VLGKDLLVVNISTAPVHQLGV--PNVKIVGNIHGDEPIGRE 96
           Y N+ +   IG S        G D+  + ++    +      P   I+G IH  E    E
Sbjct: 1   YPNLAQWVDIGDSWDKPGGPAGYDIRALKLTNKATNSPTGPKPVFFIMGAIHAREYTTAE 60

Query: 97  IILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNH 156
           ++LR  E L+  Y   D++  +LLD   IH++P +NPDG ++A +G  +    R N N  
Sbjct: 61  LVLRFAEDLLEGYGT-DADATWLLDYHEIHVVPIVNPDGRKIAEQGLSQ----RKNANTS 115

Query: 157 ------------DLNRQFPDYF------RHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVP 198
                       DLNR +   +        +  +  T    +   +PE  A+ D++  + 
Sbjct: 116 GGSNCSGSSYGVDLNRNYSFGWGGAGASSGDPCS-ETYRGPAPGSEPETAALEDYIRGLF 174

Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group. Length = 293

>gnl|CDD|133069 cd03857, M14-like_1, Peptidase M14-like domain; uncharacterized subfamily

 Score = 62.9 bits (153), Expect = 4e-11
 Identities = 51/188 (27%), Positives = 69/188 (36%), Gaps = 32/188 (17%)

Query: 54  IGKSVLGKDLLVVNISTA------PVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVV 107
           IGKSV G+ L +V ++TA       + + G P V I   IHG+E  G + +L LL  L  
Sbjct: 1   IGKSVEGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESAGSDALLELLRQLAS 60

Query: 108 EYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFR 167
                      +L+N  I L+P  NPDG+ L           R N N  DLNR F     
Sbjct: 61  A----SDEEAKMLENIVIVLIPRANPDGAAL---------FTRENANGLDLNRDF----- 102

Query: 168 HNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNI 227
                   L  T        +  I+W       +     G           F     NN+
Sbjct: 103 --------LKLTQPETRAVREVFIEWKPQFFIDLHEYGFGAVSFYDPFPQPFNYNFLNNL 154

Query: 228 NNHDLNRQ 235
               + RQ
Sbjct: 155 GIEKVIRQ 162

Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 226

>gnl|CDD|199854 cd06227, M14-like_2, Peptidase M14-like domain; uncharacterized subfamily

 Score = 63.5 bits (155), Expect = 5e-11
 Identities = 51/199 (25%), Positives = 76/199 (38%), Gaps = 16/199 (8%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNI 87
           YH  D +  E +   +     + L  + +SV  +   V+   T   +      VK +   
Sbjct: 2   YHTTDELNLEADALVK-RIEFSSLGELIESVKVRVFAVI---TLNPNGDPKKKVKALLLF 57

Query: 88  --HGDEPIGREIILRLLEHLVVEYIRGDSNIRFL---LDNTRIHLLPNLNPDGSELAVEG 142
             H  E I  E  L LL  L  E          L   LDN  + ++PN NPDG +    G
Sbjct: 58  GEHARELISPETGLHLLSTLCGEEAEPFDWGDLLKNILDNFVLKIIPNENPDGRKKVESG 117

Query: 143 N-CRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVS--TSQSIDPEVQAVIDWMNSVPF 199
           N C     R N N  DLNR +   +     + P       +   +PE +AV D + S   
Sbjct: 118 NYCL----RENENGVDLNRNYGADWGFKEDDYPDEEYSGPAPFSEPETRAVRDLLKSFSP 173

Query: 200 VMSLQLHGGNVVASYPYDS 218
            + + +H G +    PY  
Sbjct: 174 HVFISVHSGTLALFTPYAY 192

A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 269

>gnl|CDD|214748 smart00631, Zn_pept, Zn_pept domain

 Score = 62.0 bits (151), Expect = 1e-10
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 2/71 (2%)

Query: 226 NINNHDLNRQFPDYFRHNRSNIP-TLVSTSQSIDPEVQAVIDWMNS-VPFVMSLQLHGGN 283
           N    DLNR FP ++    +    T    S   +PE +AV D++ S   F + + LH  +
Sbjct: 125 NCRGVDLNRNFPFHWGETGNPCSETYAGPSPFSEPETKAVRDFIRSNRRFKLYIDLHSYS 184

Query: 284 VVASYPYDSFY 294
            +  YPY    
Sbjct: 185 QLILYPYGYTK 195

Length = 277

>gnl|CDD|214748 smart00631, Zn_pept, Zn_pept domain

 Score = 62.0 bits (151), Expect = 2e-10
 Identities = 28/107 (26%), Positives = 40/107 (37%), Gaps = 24/107 (22%)

Query: 394 SLFLPFPVTKNKPALTPDTD----VFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTN 449
           S  + +P    K  L P+ D    V   LA   A +H T             ++  G++N
Sbjct: 184 SQLILYPYGYTKNDLPPNVDDLDAVAKALAKALASVHGT-------------RYTYGISN 230

Query: 450 GAAWYSFSGGMADYNYLYHG-CLELTLEISCCR-----YPAPSEIPI 490
           GA + + SGG  D+ Y   G     TLE+          P    IP 
Sbjct: 231 GAIYPA-SGGSDDWAYGVLGIPFSFTLELRDDGRYGFLLPPSQIIPT 276

Length = 277

>gnl|CDD|199863 cd06239, M14-like_1_2, Peptidase M14-like domain; uncharacterized subgroup

 Score = 57.3 bits (139), Expect = 3e-09
 Identities = 36/115 (31%), Positives = 51/115 (44%), Gaps = 18/115 (15%)

Query: 50  ELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEY 109
           E+  IG+SV G+ +  V   T P   L      +   +HG+E    + +L LL  L    
Sbjct: 11  EVEVIGQSVEGRPIYSVKFGTGPRKIL------LWSQMHGNESTTTKALLDLLNFLGTN- 63

Query: 110 IRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPD 164
              D   + +LD   + ++P LNPDG+EL           R N N  DLNR   D
Sbjct: 64  --SDQEAKKILDECTLVIIPMLNPDGAELYT---------RVNANGIDLNRDAQD 107

Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 231

>gnl|CDD|199843 cd03859, M14_CPT, Peptidase M14 Carboxypeptidase T subfamily

 Score = 58.1 bits (141), Expect = 4e-09
 Identities = 25/79 (31%), Positives = 39/79 (49%), Gaps = 1/79 (1%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E +D+  V IS  P      P V      H  E +  E+ + L++YL+  Y   D  I+ 
Sbjct: 35  EGRDIWAVKISDNPATDENKPEVLYTSTHHAREWLSLEMAIYLIKYLLENYGT-DPRIQN 93

Query: 356 LLDNTRIHLLPNLNPDGSE 374
           L+D+  +  +P +NPDG E
Sbjct: 94  LVDSRELWFVPVVNPDGYE 112

Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor. Length = 297

>gnl|CDD|133073 cd03862, M14-like_7, Peptidase M14-like domain; uncharacterized subfamily

 Score = 55.4 bits (134), Expect = 3e-08
 Identities = 42/148 (28%), Positives = 63/148 (42%), Gaps = 31/148 (20%)

Query: 79  PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 138
           P + +VG +HG E IG +++L  LE L +E +R D  ++ LL+  R+  LP +NP G  L
Sbjct: 25  PVLGLVGGVHGLERIGTQVLLAFLESL-LERLRWDKLLQELLEKVRLVFLPLVNPVGMAL 83

Query: 139 AVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVS--------------TSQSID 184
                    + R+N N  DL R  P          P LV                   ++
Sbjct: 84  ---------KTRSNGNGVDLMRNAP---VDAEDKPPFLVGGQRLSPRLPWYRGKNGAGME 131

Query: 185 PEVQAVID----WMNSVPFVMSLQLHGG 208
            E QA+       +   PF ++L  H G
Sbjct: 132 LEAQALCRFVRELLFESPFSIALDCHSG 159

A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 273

>gnl|CDD|133101 cd06243, M14-like_1_6, Peptidase M14-like domain; uncharacterized subgroup

 Score = 52.2 bits (125), Expect = 2e-07
 Identities = 35/111 (31%), Positives = 48/111 (43%), Gaps = 16/111 (14%)

Query: 54  IGKSVLGKDLLVVNISTAPVHQL----GVPNVKIVGNIHGDEPIGREIILRLLEHLVVEY 109
           IG S  G+ + +V +  A           P V +VG  HGDEP GRE +L +   L    
Sbjct: 1   IGTSQRGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPAGREALLIIARDLAFG- 59

Query: 110 IRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNR 160
              D  +  LL  T +  +P  NPDG         R    R+N +  D+NR
Sbjct: 60  --EDEELVPLLHQTTVLFVPTANPDG---------READTRSNADGIDINR 99

Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 236

>gnl|CDD|199858 cd06234, M14_Nna1_like_1, Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases; uncharacterized bacterial subgroup

 Score = 51.9 bits (125), Expect = 3e-07
 Identities = 41/155 (26%), Positives = 65/155 (41%), Gaps = 30/155 (19%)

Query: 54  IGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGD 113
           +G++V G+D+ ++ + T      G   + I+   H  E +    +  LLE L+      D
Sbjct: 34  LGQTVQGRDIDLLTVGTPGP---GKKKIWIIARQHPGETMAEWFMEGLLERLLDPD---D 87

Query: 114 SNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS-GRGRNNINNHDLNRQFPDYFRHNRSN 172
              R LLD    +++PN+NPDGS     G+ R+   G N      LNR++          
Sbjct: 88  PVARALLDKAVFYIVPNMNPDGS---ARGHLRTNAAGAN------LNREW---------- 128

Query: 173 IPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHG 207
                       PEV AV   M +    + L +HG
Sbjct: 129 ----EEPDAERSPEVLAVRQKMLATGVDLFLDVHG 159

A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain. Length = 263

>gnl|CDD|133114 cd06904, M14_MpaA_like, Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A and related proteins

 Score = 50.0 bits (120), Expect = 5e-07
 Identities = 28/81 (34%), Positives = 34/81 (41%), Gaps = 19/81 (23%)

Query: 83  IVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG 142
           I+G IHGDEP     +  LL  L    +R              +++P LNPDG   A   
Sbjct: 3   IIGGIHGDEPASVSDLEELLRILPGLILR----------GLSWYVIPVLNPDGLLRA--- 49

Query: 143 NCRSGRGRNNINNHDLNRQFP 163
                  R N N  DLNR FP
Sbjct: 50  ------TRCNANGVDLNRNFP 64

Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins. MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway. Length = 178

>gnl|CDD|199875 cd06905, M14-like_8, Peptidase M14-like domain; uncharacterized subfamily

 Score = 51.6 bits (124), Expect = 6e-07
 Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 19/135 (14%)

Query: 261 VQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKD---LLVVNISTAPVHQLGVPN 317
              +  W ++ P ++SL+  G     SY       E +D   L + N +T P      P 
Sbjct: 11  TAFLQAWASAYPHLISLESIG----KSY-------EGRDIWLLTLTNQATGP--AREKPA 57

Query: 318 VKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE--L 375
             I  NIH  E  G  + L ++ +L+  Y   D  +  LLD    ++LP +NPDG+E  L
Sbjct: 58  FWIDANIHASEVAGSAVALYVIAHLLNGYGS-DPEVTRLLDGVTFYILPRINPDGAEQAL 116

Query: 376 AVEGNCRSGRGRTPP 390
                 R    R  P
Sbjct: 117 THTPYVRRSSRRPYP 131

A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 360

>gnl|CDD|133084 cd06226, M14_CPT_like, Peptidase M14 Carboxypeptidase T-like subfamily

 Score = 51.3 bits (123), Expect = 6e-07
 Identities = 27/81 (33%), Positives = 41/81 (50%), Gaps = 6/81 (7%)

Query: 316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 375
           P   I+G IH  E    E++LR  E L+  Y   D++  +LLD   IH++P +NPDG ++
Sbjct: 43  PVFFIMGAIHAREYTTAELVLRFAEDLLEGYGT-DADATWLLDYHEIHVVPIVNPDGRKI 101

Query: 376 AVEG-----NCRSGRGRTPPF 391
           A +G     N  +  G     
Sbjct: 102 AEQGLSQRKNANTSGGSNCSG 122

Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins. This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group. Length = 293

>gnl|CDD|133100 cd06242, M14-like_1_5, Peptidase M14-like domain; uncharacterized subgroup

 Score = 50.1 bits (120), Expect = 1e-06
 Identities = 35/133 (26%), Positives = 54/133 (40%), Gaps = 16/133 (12%)

Query: 30  NYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTA--PVHQLGVPNVKIVGNI 87
           +++ M   +++       M+    IGKS  G+ +  V +ST+           V + G +
Sbjct: 4   SHEEMESFMKSLASKNDWMSYHSDIGKSEEGRSIPYVYLSTSKSSSSSSKKLRVWLQGGV 63

Query: 88  HGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSG 147
           HG+EP G E  L LL  L       +     +L+   I +LP  NPDGS           
Sbjct: 64  HGNEPAGDEAALALLGKLD-----NNPKWASVLEKIDIIVLPRYNPDGSAY--------- 109

Query: 148 RGRNNINNHDLNR 160
             R     +D NR
Sbjct: 110 FQRTLATGYDPNR 122

Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 268

>gnl|CDD|199867 cd06245, M14_CPD_III, Peptidase M14 carboxypeptidase subfamily N/E-like; Carboxypeptidase D, domain III subgroup

 Score = 49.5 bits (118), Expect = 2e-06
 Identities = 26/76 (34%), Positives = 37/76 (48%), Gaps = 10/76 (13%)

Query: 217 DSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMS 276
                E   N +  DL+  F        SN   + + SQ   PE +A+ID +    F +S
Sbjct: 117 QCTSKEGHTNAHGKDLDTDF-------TSNASNMSADSQ---PETKAIIDNLIQKDFTLS 166

Query: 277 LQLHGGNVVASYPYDS 292
           + L GG+VVA+YPYD 
Sbjct: 167 VALDGGSVVATYPYDK 182

The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3.4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at pH 6.3-7.5 and prefers substrates with C-terminal Arg, whereas domain II is active at pH 5.0-6.5 and prefers substrates with C-terminal Lys. CPD functions in the processing of proteins that transit the secretory pathway, and is present in all vertebrates as well as Drosophila. It is broadly distributed in all tissue types. Within cells, CPD is present in the trans-Golgi network and immature secretory vesicles, but is excluded from mature vesicles. It is thought to play a role in the processing of proteins that are initially processed by furin or related endopeptidases present in the trans-Golgi network, such as growth factors and receptors. CPD is implicated in the pathogenesis of lupus erythematosus (LE), it is regulated by TGF-beta in various cell types of murine and human origin and is significantly down-regulated in CD14 positive cells isolated from patients with LE. As down -regulation of CPD leads to down-modulation of TGF-beta, CPD may have a role in a positive feedback loop. Length = 284

>gnl|CDD|199865 cd06241, M14-like_1_4, Peptidase M14-like domain; uncharacterized subgroup

 Score = 49.6 bits (119), Expect = 2e-06
 Identities = 38/152 (25%), Positives = 58/152 (38%), Gaps = 23/152 (15%)

Query: 53  SIGKSVLGKDLLVVNIST------APVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV 106
           S GK+  G+ L ++ +S           + G P V +   IH  E  G++  L LL  L 
Sbjct: 17  SFGKTPEGRPLHLLVLSKDGAFDPEEAKRSGKPVVLVNAGIHPGEIDGKDAGLMLLRDLA 76

Query: 107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRG------RNNINNHDLNR 160
                 D     LLD   +  +P  N DG E     N  +  G      R N  N +LNR
Sbjct: 77  ------DGKKDALLDKVVLVFIPVFNVDGHERRSPYNRTNQNGPEEYGWRGNARNLNLNR 130

Query: 161 QFPDYFRHNRSNIPTLVSTSQSIDPEVQAVID 192
              D+ + +   +          +P++   ID
Sbjct: 131 ---DFIKLDAPEMRAFAKLFNKWNPDL--FID 157

Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 266

>gnl|CDD|199839 cd00596, Peptidase_M14_like, M14 family of metallocarboxypeptidases and related proteins

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 20/75 (26%), Positives = 31/75 (41%), Gaps = 1/75 (1%)

Query: 226 NINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVV 285
           N N  DLNR FP  +    +          S +PE +A+   +    F + + LH G++ 
Sbjct: 62  NANGVDLNRNFPGIWGKRGAPETYGGPAPLS-EPETRALAALIKQRKFDLVINLHSGSLA 120

Query: 286 ASYPYDSFYGESKDL 300
             YPY     +  D 
Sbjct: 121 ILYPYGHSDNDPDDF 135

The M14 family of metallocarboxypeptidases (MCPs), also known as funnelins, are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 211

>gnl|CDD|133101 cd06243, M14-like_1_6, Peptidase M14-like domain; uncharacterized subgroup

 Score = 48.0 bits (114), Expect = 5e-06
 Identities = 29/88 (32%), Positives = 38/88 (43%), Gaps = 5/88 (5%)

Query: 295 GESKDLLVVNISTAP--VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSN 352
           G    L+ V  +  P  +     P V +VG  HGDEP GRE +L +   L       D  
Sbjct: 7   GRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPAGREALLIIARDLAFG---EDEE 63

Query: 353 IRFLLDNTRIHLLPNLNPDGSELAVEGN 380
           +  LL  T +  +P  NPDG E     N
Sbjct: 64  LVPLLHQTTVLFVPTANPDGREADTRSN 91

Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 236

>gnl|CDD|225421 COG2866, COG2866, Predicted carboxypeptidase [Amino acid transport and metabolism]

 Score = 47.1 bits (112), Expect = 2e-05
 Identities = 42/160 (26%), Positives = 65/160 (40%), Gaps = 18/160 (11%)

Query: 9   LLQTALVLLRPAAGMSFGN----YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLL 64
                  LL      SF           +     E ++     + EL  IG+SV G+D  
Sbjct: 77  YPIENWFLLPDGYPASFMTFTLAPEEGRVEFAFFEPYSLEQHLLVELELIGRSVEGRDDP 136

Query: 65  VVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTR 124
           ++    +      +    I    H     G +++   L +L++ Y+  D  +R LLD   
Sbjct: 137 LITFPESNPEHKTIL---ITAGQH---ARGEKMVEWFLYNLILRYLDPDVQVRKLLDRAD 190

Query: 125 IHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPD 164
           +H++PN+NPDGS+L        G  R N N  DLNR F  
Sbjct: 191 LHVVPNVNPDGSDL--------GNLRTNANGVDLNRNFIA 222

Length = 374

>gnl|CDD|199868 cd06246, M14_CPB2, Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase B2 subgroup

 Score = 46.4 bits (110), Expect = 2e-05
 Identities = 49/213 (23%), Positives = 82/213 (38%), Gaps = 19/213 (8%)

Query: 27  NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGN 86
            YH+ + +   +E  T  + +M E   IG S     L V+ +S     Q     + I   
Sbjct: 4   QYHSLNEIYSWIEFITERHPDMLEKIHIGSSFEKYPLYVLKVSGK--EQTAKNAIWIDCG 61

Query: 87  IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGN--- 143
           IH  E I     L  + H   ++         LL +   +++P +N DG +   + N   
Sbjct: 62  IHAREWISPAFCLWFVGH-ATQFYGIIGQYTNLLRHMDFYIMPVVNVDGYDYTWKKNRMW 120

Query: 144 --CRSGRGRNNINNHDLNRQFPDYFRHNR-----SNIPTLVSTSQSIDPEVQAVIDWM-- 194
              RS    N+    DLNR F             S   T        +PEV+AV  ++  
Sbjct: 121 RKNRSFYANNHCIGTDLNRNFASKHWCEEGASSSSCSETYCGLYPESEPEVKAVASFLRR 180

Query: 195 --NSVPFVMSLQLHGGNVVASYPYDSFYGESKN 225
             N +   +S+  +  ++V  +PY     +SK+
Sbjct: 181 NINQIKAYISMHSYSQHIV--FPYSYTRSKSKD 211

Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity while low TAFI levels have been correlated with chronic liver disease. Length = 302

>gnl|CDD|199869 cd06248, M14_CP_A-B_like_1, Peptidase M14 carboxypeptidase subfamily A/B-like; uncharacterized subgroup

 Score = 46.1 bits (110), Expect = 3e-05
 Identities = 30/111 (27%), Positives = 54/111 (48%), Gaps = 2/111 (1%)

Query: 25  FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIV 84
           F +YH  +   + L +    + + +EL++IGKS  G+ +  ++I  +       P + I 
Sbjct: 1   FDSYHPLEDHLQWLRDLQAAFPSNSELFTIGKSYEGRTITGIHIWGSGGKG-SKPAIVIH 59

Query: 85  GNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDG 135
           G +H  E I    +  L   L+  Y   D+ +  LLD    +++P +NPDG
Sbjct: 60  GTVHAREWISTMTVEYLAYQLLTGY-GSDATVTALLDKFDFYIIPVVNPDG 109

The Peptidase M14 Carboxypeptidase A/B-like subfamily is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E. Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the pancreas. The A forms have slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA3 is found in secretory granules of mast cells and functions in inflammatory processes. CPA4, detected in hormone-regulated tissues, is thought to play a role in prostate cancer. CPA5 is present in discrete regions of pituitary and other tissues, and cleaves aliphatic C-terminal residues. CPA6 is highly expressed in embryonic brain and optic muscle, suggesting that it may play a specific role in cell migration and axonal guidance. CPU (also called CPB2) is produced and secreted by the liver as the inactive precursor PCPU, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). Little is known about CPO but it has been suggested to have specificity for acidic residues. Length = 303

>gnl|CDD|199857 cd06231, M14-like_4, Peptidase M14-like domain; uncharacterized subfamily

 Score = 44.7 bits (106), Expect = 6e-05
 Identities = 32/132 (24%), Positives = 47/132 (35%), Gaps = 37/132 (28%)

Query: 77  GVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGS 136
            +P V I   +HG EP G    L  LE L     R  +    L  +  + +LP +NP G 
Sbjct: 41  SLPRVLITAGVHGYEPAG---PLGALEFL-----RAAAA--DLFQDVNLSVLPCINPSGF 90

Query: 137 ELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNS 196
           E            R N    D NR F               S S     E + +++++  
Sbjct: 91  E---------AITRWNPTGEDPNRSF------------RSESPS----LEGRLLMEYLRR 125

Query: 197 --VPFVMSLQLH 206
               F + + LH
Sbjct: 126 LGANFDLHIDLH 137

A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 234

>gnl|CDD|222268 pfam13620, CarboxypepD_reg, Carboxypeptidase regulatory-like domain

 Score = 41.1 bits (97), Expect = 9e-05
 Identities = 14/81 (17%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 509 GVKGLVLDETGSRLANVSISLAYK----NVSFMSSQRGEYW-RVLMPGIYFIEASKEGYE 563
            + G V D +G+ +   +++L            +   G +    L PG Y +  S  GY+
Sbjct: 1   TISGTVTDASGAPIPGATVTLTNADTGTVRGTTTDADGRFSLTGLPPGTYTLTVSAPGYK 60

Query: 564 LF-RDRIKIPESTSPVVGAVL 583
                 + +    +  +   L
Sbjct: 61  SQTVKDVTVTAGQTTTLDITL 81

Length = 81

>gnl|CDD|199855 cd06229, M14_Endopeptidase_I, Peptidase M14 carboxypeptidase family-like domain of Endopeptidase I

 Score = 43.8 bits (104), Expect = 1e-04
 Identities = 22/68 (32%), Positives = 36/68 (52%), Gaps = 6/68 (8%)

Query: 317 NVKIVGNIHGDEPIGREIILRLLE-----YLVVEYIRGDSNIRFLLDNTRIHLLPNLNPD 371
            V    + H  E I   ++++ LE     Y   E +RG  +IR LL+N  + ++P +NPD
Sbjct: 18  TVFYNASFHAREWITTLLLMKFLEDYARAYECGEKLRG-YDIRDLLENVTLCIVPMVNPD 76

Query: 372 GSELAVEG 379
           G E++  G
Sbjct: 77  GVEISQNG 84

Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3.4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments. Length = 256

>gnl|CDD|133073 cd03862, M14-like_7, Peptidase M14-like domain; uncharacterized subfamily

 Score = 43.8 bits (104), Expect = 1e-04
 Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)

Query: 316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 375
           P + +VG +HG E IG +++L  LE L +E +R D  ++ LL+  R+  LP +NP G  L
Sbjct: 25  PVLGLVGGVHGLERIGTQVLLAFLESL-LERLRWDKLLQELLEKVRLVFLPLVNPVGMAL 83

Query: 376 AVEGN 380
               N
Sbjct: 84  KTRSN 88

A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 273

>gnl|CDD|199856 cd06230, M14_ASTE_ASPA_like, Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily

 Score = 43.9 bits (104), Expect = 1e-04
 Identities = 26/81 (32%), Positives = 32/81 (39%), Gaps = 21/81 (25%)

Query: 83  IVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG 142
           I G +HG+EP G + I RLL  L      G            + L+P  NP   E     
Sbjct: 3   ITGGVHGNEPCGVQAIERLLAELE----PGQELKG------PVKLVPAANPLALEAGQ-- 50

Query: 143 NCRSGRGRNNINNHDLNRQFP 163
             R G       + DLNR FP
Sbjct: 51  --RYG-------DRDLNRIFP 62

The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. Length = 254

>gnl|CDD|199841 cd03856, M14_Nna1_like, Peptidase M14-like domain of ATP/GTP binding proteins, cytosolic carboxypeptidases and related proteins

 Score = 44.2 bits (104), Expect = 1e-04
 Identities = 29/143 (20%), Positives = 56/143 (39%), Gaps = 18/143 (12%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNI 87
             +       L    +      E+ ++G+S  G+ +  +   +   +      + I+   
Sbjct: 7   AIDNQEYDRWLALLKKQGQPSLEVETLGQSEKGRPIKALIKQSPKNN----EWIVIIARQ 62

Query: 88  HGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSG 147
           H  E      +   LE L+++    ++    L +     ++P+LNPDG E        +G
Sbjct: 63  HPGETTAAWALFGFLEALLLD----EALSTPLFERFNFLIVPDLNPDGVE--------TG 110

Query: 148 RGRNNINNHDLNRQF--PDYFRH 168
             R+N N  DLNR +  P+ F  
Sbjct: 111 NWRHNANGIDLNRDWQNPNPFAQ 133

Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna1 cause Purkinje cell degeneration (pcd). The Nna1 CP domain is required to prevent the retinal photoreceptor loss and cerebellar ataxia phenotypes of pcd mice, and a functional zinc-binding domain is needed for Nna-1 to support neuron survival in these mice. Nna1-like proteins from the different phyla are highly diverse, but they all contain a characteristic N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain. Length = 258

>gnl|CDD|199862 cd06238, M14-like_1_1, Peptidase M14-like domain; uncharacterized subgroup

 Score = 43.8 bits (104), Expect = 1e-04
 Identities = 31/95 (32%), Positives = 38/95 (40%), Gaps = 23/95 (24%)

Query: 86  NIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR 145
           ++HG+E  G E  L    HL     +GD  I  LLDNT + + P  NPDG +  V     
Sbjct: 56  SVHGNEISGTEAALLTAYHLAAA--QGD-EIEALLDNTVVLIDPMQNPDGRDRFVN-WFN 111

Query: 146 SGRGRNNI----------------NNH---DLNRQ 161
           S RG                     NH   DLNR 
Sbjct: 112 STRGMVPNADPNAREHDEPWPSGRTNHYWFDLNRD 146

Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 270

>gnl|CDD|133069 cd03857, M14-like_1, Peptidase M14-like domain; uncharacterized subfamily

 Score = 42.4 bits (100), Expect = 3e-04
 Identities = 28/86 (32%), Positives = 41/86 (47%), Gaps = 10/86 (11%)

Query: 296 ESKDLLVVNISTA------PVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG 349
           E + L +V ++TA       + + G P V I   IHG+E  G + +L LL  L       
Sbjct: 6   EGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESAGSDALLELLRQLASA---- 61

Query: 350 DSNIRFLLDNTRIHLLPNLNPDGSEL 375
                 +L+N  I L+P  NPDG+ L
Sbjct: 62  SDEEAKMLENIVIVLIPRANPDGAAL 87

Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 226

>gnl|CDD|199862 cd06238, M14-like_1_1, Peptidase M14-like domain; uncharacterized subgroup

 Score = 42.7 bits (101), Expect = 3e-04
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 4/67 (5%)

Query: 323 NIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR 382
           ++HG+E  G E  L    +L     +GD  I  LLDNT + + P  NPDG +  V     
Sbjct: 56  SVHGNEISGTEAALLTAYHLAAA--QGD-EIEALLDNTVVLIDPMQNPDGRDRFVN-WFN 111

Query: 383 SGRGRTP 389
           S RG  P
Sbjct: 112 STRGMVP 118

Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 270

>gnl|CDD|133100 cd06242, M14-like_1_5, Peptidase M14-like domain; uncharacterized subgroup

 Score = 42.4 bits (100), Expect = 4e-04
 Identities = 31/107 (28%), Positives = 45/107 (42%), Gaps = 14/107 (13%)

Query: 273 FVMSLQLHGGNVVASYPYDSFYGES---KDLLVVNISTA--PVHQLGVPNVKIVGNIHGD 327
           F+ SL      +     Y S  G+S   + +  V +ST+           V + G +HG+
Sbjct: 11  FMKSLASKNDWMS----YHSDIGKSEEGRSIPYVYLSTSKSSSSSSKKLRVWLQGGVHGN 66

Query: 328 EPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 374
           EP G E  L LL  L       +     +L+   I +LP  NPDGS 
Sbjct: 67  EPAGDEAALALLGKLD-----NNPKWASVLEKIDIIVLPRYNPDGSA 108

Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 268

>gnl|CDD|133081 cd03870, M14_CPA, Peptidase M14 carboxypeptidase subfamily A/B-like; Carboxypeptidase A subgroup

 Score = 42.5 bits (100), Expect = 4e-04
 Identities = 45/202 (22%), Positives = 84/202 (41%), Gaps = 14/202 (6%)

Query: 25  FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIV 84
           +  YH  D + + ++     + N+     IG+S  G+ + V+  ST   ++   P + I 
Sbjct: 3   YATYHTLDEIYDFMDLLVAEHPNLVSKLQIGRSYEGRPIYVLKFSTGGSNR---PAIWID 59

Query: 85  GNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGN- 143
             IH  E I +   +   + +  +Y + D +   +LD+  I L    NPDG       N 
Sbjct: 60  AGIHSREWITQATGVWFAKKITEDYGQ-DPSFTAILDSMDIFLEIVTNPDGFAFTHSQNR 118

Query: 144 ----CRSGRGRNNINNHDLNRQFPDYF-RHNRSNIP---TLVSTSQSIDPEVQAVIDWMN 195
                RS    +     D NR +   F     S+ P   T      + + EV++++D++ 
Sbjct: 119 LWRKTRSVTSGSLCVGVDPNRNWDAGFGGAGASSNPCSETYHGKYANSEVEVKSIVDFVK 178

Query: 196 SVPFVMS-LQLHGGNVVASYPY 216
           S     + + +H  + +  YPY
Sbjct: 179 SHGNFKAFISIHSYSQLLLYPY 200

Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA4, detected in hormone-regulated tissues, is thought to play a role in prostate cancer. Length = 301

>gnl|CDD|199863 cd06239, M14-like_1_2, Peptidase M14-like domain; uncharacterized subgroup

 Score = 41.1 bits (97), Expect = 7e-04
 Identities = 22/71 (30%), Positives = 37/71 (52%), Gaps = 7/71 (9%)

Query: 309 PVHQL--GVPNVKIVG--NIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHL 364
           P++ +  G    KI+    +HG+E    + +L LL +L       D   + +LD   + +
Sbjct: 23  PIYSVKFGTGPRKILLWSQMHGNESTTTKALLDLLNFLGTN---SDQEAKKILDECTLVI 79

Query: 365 LPNLNPDGSEL 375
           +P LNPDG+EL
Sbjct: 80  IPMLNPDGAEL 90

Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavage. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 231

>gnl|CDD|199859 cd06235, M14_Nna1_like_2, Peptidase M14-like domain of human Nna1/AGTPBP-1, AGBL2 -5, and related proteins

 Score = 41.4 bits (98), Expect = 7e-04
 Identities = 41/170 (24%), Positives = 66/170 (38%), Gaps = 39/170 (22%)

Query: 83  IVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG 142
           I    H  E     ++   ++ L    +      ++L +N    ++P LNPDG    + G
Sbjct: 50  ITARQHPGETNSSFVMQGFIDFL----LSDSPEAQYLRENFIFKIIPMLNPDG---VIHG 102

Query: 143 NCRSGRGRNNINNHDLNRQF--PDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFV 200
           N      R +++  DLNRQ+  PD     +   P + S  Q I                +
Sbjct: 103 N-----YRCSLSGIDLNRQWKNPD-----KKLHPEIYSVKQLIK-------KLSQERNII 145

Query: 201 MSLQLHGGNVVASYPYDSF-YG-ESKNNINNHDLNRQFP-------DYFR 241
           + + LHG     S   +SF YG E+ ++  N+   R FP        YF 
Sbjct: 146 LFIDLHG----HSRKKNSFMYGCENSDDPLNYYKERLFPKLLSKLCPYFS 191

Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna1 cause Purkinje cell degeneration (pcd). The Nna1 CP domain is required to prevent the retinal photoreceptor loss and cerebellar ataxia phenotypes of pcd mice, and a functional zinc-binding domain is needed for Nna-1 to support neuron survival in these mice. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain. Length = 258

>gnl|CDD|199858 cd06234, M14_Nna1_like_1, Peptidase M14-like domain of ATP/GTP binding proteins and cytosolic carboxypeptidases; uncharacterized bacterial subgroup

 Score = 41.1 bits (97), Expect = 8e-04
 Identities = 27/88 (30%), Positives = 37/88 (42%), Gaps = 11/88 (12%)

Query: 295 GESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           G   DLL V          G   + I+   H  E +    +  LLE L+      D   R
Sbjct: 40  GRDIDLLTVG-----TPGPGKKKIWIIARQHPGETMAEWFMEGLLERLLDPD---DPVAR 91

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCR 382
            LLD    +++PN+NPDGS     G+ R
Sbjct: 92  ALLDKAVFYIVPNMNPDGS---ARGHLR 116

A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins. The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain. Length = 263

>gnl|CDD|199844 cd03860, M14_CP_A-B_like, Peptidase M14 carboxypeptidase subfamily A/B-like

 Score = 41.0 bits (97), Expect = 0.001
 Identities = 23/77 (29%), Positives = 34/77 (44%), Gaps = 5/77 (6%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E + +  + IS         P + I   IH  E I     L ++  LV  Y   D  +  
Sbjct: 32  EGRPIKGLKISNGGRS--NKPAIFIDAGIHAREWISPATALYIINQLVESY---DPEVTE 86

Query: 356 LLDNTRIHLLPNLNPDG 372
           LLDN   +++P +NPDG
Sbjct: 87  LLDNYDWYIVPVVNPDG 103

The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily. CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the pancreas. The A forms have slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 preferring the bulkier aromatic side chains. CPA3 is found in secretory granules of mast cells and functions in inflammatory processes. CPA4 is detected in hormone-regulated tissues, and is thought to play a role in prostate cancer. CPA5 is present in discrete regions of pituitary and other tissues, and cleaves aliphatic C-terminal residues. CPA6 is highly expressed in embryonic brain and optic muscle, suggesting that it may play a specific role in cell migration and axonal guidance. CPU (also called CPB2) is produced and secreted by the liver as the inactive precursor, PCPU, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). Little is known about CPO but it has been suggested to have specificity for acidic residues. Length = 293

>gnl|CDD|218345 pfam04952, AstE_AspA, Succinylglutamate desuccinylase / Aspartoacylase family

 Score = 41.2 bits (97), Expect = 0.001
 Identities = 25/85 (29%), Positives = 32/85 (37%), Gaps = 19/85 (22%)

Query: 79  PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 138
           P + +   IHG+E  G E++ RLL  L      G              L+P  NP     
Sbjct: 3   PRLLLSAGIHGNELAGVELLRRLLRQLDPAQRAG-----------TRTLVPLANP----P 47

Query: 139 AVEGNCRSGRGRNNINNHDLNRQFP 163
           A     R       I+  DLNR FP
Sbjct: 48  AFRAGSR----YIPIDRRDLNRAFP 68

This family includes Succinylglutamate desuccinylase EC:3.1.-.- that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. The family also include aspartoacylase EC:3.5.1.15 which cleaves acylaspartate into a fatty acid and aspartate. Mutations in human ASPA lead to Canavan disease disease. This family is probably structurally related to pfam00246 (Bateman A pers. obs.). Length = 289

>gnl|CDD|199854 cd06227, M14-like_2, Peptidase M14-like domain; uncharacterized subfamily

 Score = 39.7 bits (93), Expect = 0.003
 Identities = 28/99 (28%), Positives = 36/99 (36%), Gaps = 6/99 (6%)

Query: 295 GESKDLLVVNISTAPVHQLGVPNVKIVGNI--HGDEPIGREIILRLLEYLVVEYIRGDSN 352
            ES  + V  + T   +      VK +     H  E I  E  L LL  L  E       
Sbjct: 28  IESVKVRVFAVITLNPNGDPKKKVKALLLFGEHARELISPETGLHLLSTLCGEEAEPFDW 87

Query: 353 IRFL---LDNTRIHLLPNLNPDGSELAVEGN-CRSGRGR 387
              L   LDN  + ++PN NPDG +    GN C      
Sbjct: 88  GDLLKNILDNFVLKIIPNENPDGRKKVESGNYCLRENEN 126

A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring aliphatic and small aromatic residues, and CPA2 preferring the bulky aromatic side chains. Enzymes belonging to the N/E subfamily enzymes are not produced as inactive precursors and instead rely on their substrate specificity and subcellular compartmentalization to prevent inappropriate cleavages. They contain an extra C-terminal transthyretin-like domain, thought to be involved in folding or formation of oligomers. MCPs can also be classified based on their involvement in specific physiological processes; the pancreatic MCPs participate only in alimentary digestion and include carboxypeptidase A and B (A/B subfamily), while others, namely regulatory MCPs or the N/E subfamily, are involved in more selective reactions, mainly in non-digestive tissues and fluids, acting on blood coagulation/fibrinolysis, inflammation and local anaphylaxis, pro-hormone and neuropeptide processing, cellular response and others. Another MCP subfamily, is that of succinylglutamate desuccinylase /aspartoacylase, which hydrolyzes N-acetyl-L-aspartate (NAA), and deficiency in which is the established cause of Canavan disease. Another subfamily (referred to as subfamily C) includes an exceptional type of activity in the MCP family, that of dipeptidyl-peptidase activity of gamma-glutamyl-(L)-meso-diaminopimelate peptidase I which is involved in bacterial cell wall metabolism. Length = 269

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	651
cd03869	405	M14_CPX_like Peptidase M14-like domain of carboxyp	100.0
cd03863	375	M14_CPD_II The second carboxypeptidase (CP)-like d	100.0
cd03864	392	M14_CPN Peptidase M14 Carboxypeptidase N (CPN, als	100.0
cd03865	402	M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (C	100.0
cd06245	363	M14_CPD_III The third carboxypeptidase (CP)-like d	100.0
cd03866	376	M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM	100.0
cd03867	395	M14_CPZ Peptidase M14-like domain of carboxypeptid	100.0
KOG2649|consensus	500		100.0
cd03868	372	M14_CPD_I The first carboxypeptidase (CP)-like dom	100.0
cd03858	374	M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub	100.0
KOG2650|consensus	418		100.0
cd03872	300	M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also know	100.0
cd06247	298	M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO	100.0
cd03870	301	M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA	100.0
cd03871	300	M14_CPB Peptidase M14 Carboxypeptidase B (CPB) bel	100.0
cd06246	300	M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (C	100.0
cd03859	295	M14_CPT Peptidase M14-like domain of carboxypeptid	100.0
cd06248	304	M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/	100.0
cd06226	293	M14_CPT_like Peptidase M14-like domain of an uncha	100.0
cd06227	272	Peptidase_M14-like_2 A functionally uncharacterize	100.0
cd03860	294	M14_CP_A-B_like The Peptidase M14 Carboxypeptidase	100.0
cd06905	360	Peptidase_M14-like_8 A functionally uncharacterize	100.0
smart00631	277	Zn_pept Zn_pept.	100.0
cd06228	332	Peptidase_M14-like_3 A functionally uncharacterize	100.0
PF00246	279	Peptidase_M14: Zinc carboxypeptidase This is famil	100.0
cd06229	255	M14_Endopeptidase_I Peptidase M14-like domain of G	100.0
KOG2650|consensus	418		100.0
cd06237	244	M14_Nna1_like_3 A bacterial subgroup of the Peptid	100.0
cd03871	300	M14_CPB Peptidase M14 Carboxypeptidase B (CPB) bel	100.0
cd06246	300	M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (C	100.0
cd06247	298	M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO	100.0
cd06234	263	M14_Nna1_like_1 A bacterial subgroup of the Peptid	100.0
cd03872	300	M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also know	100.0
cd03870	301	M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA	100.0
cd06908	261	M14_AGBL4_like Peptidase M14-like domain of ATP/GT	100.0
cd06248	304	M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/	100.0
cd03862	273	Peptidase_M14-like_7 A functionally uncharacterize	100.0
cd03856	269	M14_Nna1_like Peptidase M14-like domain of Nna-1 (	100.0
cd06228	332	Peptidase_M14-like_3 A functionally uncharacterize	100.0
cd06242	268	Peptidase_M14-like_1_5 Peptidase M14-like domain o	100.0
cd03860	294	M14_CP_A-B_like The Peptidase M14 Carboxypeptidase	100.0
cd06239	231	Peptidase_M14-like_1_2 Peptidase M14-like domain o	99.97
cd06229	255	M14_Endopeptidase_I Peptidase M14-like domain of G	99.97
PRK10602	237	murein peptide amidase A; Provisional	99.97
cd06235	258	M14_Nna1_like_2 Subgroup of the Peptidase M14-like	99.97
cd06238	271	Peptidase_M14-like_1_1 Peptidase M14-like domain o	99.97
cd06236	304	M14_AGBL5_like Peptidase M14-like domain of ATP/GT	99.97
cd06227	272	Peptidase_M14-like_2 A functionally uncharacterize	99.97
smart00631	277	Zn_pept Zn_pept.	99.97
cd06907	261	M14_AGBL2-3_like Peptidase M14-like domain of ATP/	99.97
cd06905	360	Peptidase_M14-like_8 A functionally uncharacterize	99.97
cd06241	266	Peptidase_M14-like_1_4 Peptidase M14-like domain o	99.96
cd03863	375	M14_CPD_II The second carboxypeptidase (CP)-like d	99.96
cd00596	196	Peptidase_M14_like The M14 family of metallocarbox	99.96
cd03869	405	M14_CPX_like Peptidase M14-like domain of carboxyp	99.95
cd06243	236	Peptidase_M14-like_1_6 Peptidase M14-like domain o	99.95
cd06244	268	Peptidase_M14-like_1_7 Peptidase M14-like domain o	99.95
cd03867	395	M14_CPZ Peptidase M14-like domain of carboxypeptid	99.94
cd03868	372	M14_CPD_I The first carboxypeptidase (CP)-like dom	99.94
cd06245	363	M14_CPD_III The third carboxypeptidase (CP)-like d	99.94
cd03866	376	M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM	99.94
cd03857	226	Peptidase_M14-like_1 Peptidase M14-like domain of	99.94
cd03865	402	M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (C	99.94
cd03859	295	M14_CPT Peptidase M14-like domain of carboxypeptid	99.94
cd03858	374	M14_CP_N-E_like Carboxypeptidase (CP) N/E-like sub	99.93
cd06906	278	M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervo	99.93
cd06226	293	M14_CPT_like Peptidase M14-like domain of an uncha	99.93
cd06240	273	Peptidase_M14-like_1_3 Peptidase M14-like domain o	99.93
cd03864	392	M14_CPN Peptidase M14 Carboxypeptidase N (CPN, als	99.92
cd06904	178	M14_MpaA_like Peptidase M14-like domain of Escheri	99.91
cd03862	273	Peptidase_M14-like_7 A functionally uncharacterize	99.91
cd06237	244	M14_Nna1_like_3 A bacterial subgroup of the Peptid	99.91
KOG2649|consensus	500		99.9
PF00246	279	Peptidase_M14: Zinc carboxypeptidase This is famil	99.89
cd06231	236	Peptidase_M14-like_4 A functionally uncharacterize	99.88
cd03856	269	M14_Nna1_like Peptidase M14-like domain of Nna-1 (	99.87
cd06232	240	Peptidase_M14-like_5 Peptidase M14-like domain of	99.87
cd06234	263	M14_Nna1_like_1 A bacterial subgroup of the Peptid	99.86
PRK10602	237	murein peptide amidase A; Provisional	99.85
cd06238	271	Peptidase_M14-like_1_1 Peptidase M14-like domain o	99.82
cd06908	261	M14_AGBL4_like Peptidase M14-like domain of ATP/GT	99.82
cd06242	268	Peptidase_M14-like_1_5 Peptidase M14-like domain o	99.8
cd06235	258	M14_Nna1_like_2 Subgroup of the Peptidase M14-like	99.79
cd06239	231	Peptidase_M14-like_1_2 Peptidase M14-like domain o	99.79
cd06243	236	Peptidase_M14-like_1_6 Peptidase M14-like domain o	99.78
cd06236	304	M14_AGBL5_like Peptidase M14-like domain of ATP/GT	99.75
cd06241	266	Peptidase_M14-like_1_4 Peptidase M14-like domain o	99.74
cd06904	178	M14_MpaA_like Peptidase M14-like domain of Escheri	99.74
cd06244	268	Peptidase_M14-like_1_7 Peptidase M14-like domain o	99.73
cd06240	273	Peptidase_M14-like_1_3 Peptidase M14-like domain o	99.72
cd03857	226	Peptidase_M14-like_1 Peptidase M14-like domain of	99.72
cd06907	261	M14_AGBL2-3_like Peptidase M14-like domain of ATP/	99.68
KOG3641|consensus	650		99.58
cd06232	240	Peptidase_M14-like_5 Peptidase M14-like domain of	99.57
cd06231	236	Peptidase_M14-like_4 A functionally uncharacterize	99.54
cd00596	196	Peptidase_M14_like The M14 family of metallocarbox	99.53
cd06906	278	M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervo	99.51
PF13715	88	DUF4480: Domain of unknown function (DUF4480)	99.43
cd06233	283	Peptidase_M14-like_6 Peptidase M14-like domain of	99.42
COG2866	374	Predicted carboxypeptidase [Amino acid transport a	99.3
cd06250	359	M14_PaAOTO_like An uncharacterized subgroup of the	99.29
PF13620	82	CarboxypepD_reg: Carboxypeptidase regulatory-like	99.24
cd06230	252	M14_ASTE_ASPA_like The Peptidase M14 Succinylgluta	99.17
cd06251	287	M14_ASTE_ASPA_like_1 A functionally uncharacterize	99.15
cd06254	288	M14_ASTE_ASPA_like_4 A functionally uncharacterize	99.15
cd06255	293	M14_ASTE_ASPA_like_5 A functionally uncharacterize	99.14
cd06252	316	M14_ASTE_ASPA_like_2 A functionally uncharacterize	98.99
cd06253	298	M14_ASTE_ASPA_like_3 A functionally uncharacterize	98.99
TIGR02994	325	ectoine_eutE ectoine utilization protein EutE. Mem	98.93
PF10994	341	DUF2817: Protein of unknown function (DUF2817); In	98.92
PF04952	292	AstE_AspA: Succinylglutamate desuccinylase / Aspar	98.91
cd06250	359	M14_PaAOTO_like An uncharacterized subgroup of the	98.84
COG2866	374	Predicted carboxypeptidase [Amino acid transport a	98.81
cd06233	283	Peptidase_M14-like_6 Peptidase M14-like domain of	98.81
cd06251	287	M14_ASTE_ASPA_like_1 A functionally uncharacterize	98.72
PRK02259	288	aspartoacylase; Provisional	98.63
COG3608	331	Predicted deacylase [General function prediction o	98.61
TIGR02994	325	ectoine_eutE ectoine utilization protein EutE. Mem	98.61
cd06254	288	M14_ASTE_ASPA_like_4 A functionally uncharacterize	98.58
cd03855	322	M14_ASTE Peptidase M14 Succinylglutamate desucciny	98.57
cd06256	327	M14_ASTE_ASPA_like_6 A functionally uncharacterize	98.56
cd06909	282	M14_ASPA Aspartoacylase (ASPA) belongs to the Succ	98.53
cd06253	298	M14_ASTE_ASPA_like_3 A functionally uncharacterize	98.5
cd06252	316	M14_ASTE_ASPA_like_2 A functionally uncharacterize	98.49
cd06910	272	M14_ASTE_ASPA_like_7 A functionally uncharacterize	98.48
PRK05324	329	succinylglutamate desuccinylase; Provisional	98.45
cd06230	252	M14_ASTE_ASPA_like The Peptidase M14 Succinylgluta	98.43
cd06255	293	M14_ASTE_ASPA_like_5 A functionally uncharacterize	98.31
TIGR03242	319	arg_catab_astE succinylglutamate desuccinylase. Me	98.25
PF04952	292	AstE_AspA: Succinylglutamate desuccinylase / Aspar	98.01
PF08400	134	phage_tail_N: Prophage tail fibre N-terminal; Inte	97.81
COG3608	331	Predicted deacylase [General function prediction o	97.78
cd06909	282	M14_ASPA Aspartoacylase (ASPA) belongs to the Succ	97.39
PRK15036	137	hydroxyisourate hydrolase; Provisional	97.35
COG2988	324	Succinylglutamate desuccinylase [Amino acid transp	97.34
PF08308	71	PEGA: PEGA domain; InterPro: IPR013229 This domain	97.21
PRK02259	288	aspartoacylase; Provisional	97.12
KOG3641|consensus	650		97.06
PRK05324	329	succinylglutamate desuccinylase; Provisional	97.05
cd06256	327	M14_ASTE_ASPA_like_6 A functionally uncharacterize	97.01
PF09892	193	DUF2119: Uncharacterized protein conserved in arch	96.93
cd06910	272	M14_ASTE_ASPA_like_7 A functionally uncharacterize	96.82
cd03855	322	M14_ASTE Peptidase M14 Succinylglutamate desucciny	96.82
cd00421	146	intradiol_dioxygenase Intradiol dioxygenases catal	96.73
TIGR03242	319	arg_catab_astE succinylglutamate desuccinylase. Me	96.72
PF07210	85	DUF1416: Protein of unknown function (DUF1416); In	96.63
PF10994	341	DUF2817: Protein of unknown function (DUF2817); In	96.25
PF02369	100	Big_1: Bacterial Ig-like domain (group 1); InterPr	95.63
KOG1948|consensus	1165		95.59
PF00775	183	Dioxygenase_C: Dioxygenase; InterPro: IPR000627 Th	95.58
cd03458	256	Catechol_intradiol_dioxygenases Catechol intradiol	95.53
PF14686	95	fn3_3: Polysaccharide lyase family 4, domain II; P	95.26
PF05738	70	Cna_B: Cna protein B-type domain; InterPro: IPR008	95.23
COG4073	198	Uncharacterized protein conserved in archaea [Func	95.21
TIGR02465	246	chlorocat_1_2 chlorocatechol 1,2-dioxygenase. Memb	95.11
cd03462	247	1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs)	95.07
TIGR02439	285	catechol_proteo catechol 1,2-dioxygenase, proteoba	95.0
cd03459	158	3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD)	94.94
cd03460	282	1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyz	94.89
TIGR02438	281	catachol_actin catechol 1,2-dioxygenase, Actinobac	94.65
cd03463	185	3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4	94.61
cd03461	277	1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) ca	94.47
TIGR02423	193	protocat_alph protocatechuate 3,4-dioxygenase, alp	94.46
smart00634	92	BID_1 Bacterial Ig-like domain (group 1).	94.26
cd03464	220	3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4-	94.21
TIGR02422	220	protocat_beta protocatechuate 3,4-dioxygenase, bet	93.96
COG3485	226	PcaH Protocatechuate 3,4-dioxygenase beta subunit	93.74
PF12985	104	DUF3869: Domain of unknown function (DUF3869); Int	92.94
PF09430	123	DUF2012: Protein of unknown function (DUF2012); In	92.37
PF12866	222	DUF3823: Protein of unknown function (DUF3823); In	92.06
PF10670	215	DUF4198: Domain of unknown function (DUF4198)	91.07
PF11974	97	MG1: Alpha-2-macroglobulin MG1 domain; InterPro: I	89.72
COG5266	264	CbiK ABC-type Co2+ transport system, periplasmic c	89.47
TIGR02962	112	hdxy_isourate hydroxyisourate hydrolase. Members o	88.47
PF06488	301	L_lac_phage_MSP: Lactococcus lactis bacteriophage	84.75
PF09892	193	DUF2119: Uncharacterized protein conserved in arch	84.25
PF00576	112	Transthyretin: HIUase/Transthyretin family; InterP	83.09
KOG1948|consensus	1165		83.06

>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=1e-86  Score=706.06  Aligned_cols=380  Identities=37%  Similarity=0.695  Sum_probs=342.2

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322          24 SFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLL  102 (651)
Q Consensus        24 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~  102 (651)
                      +| +||+|+||.++|++|+++||+++++++||+|+|||+|++|+|++++ .+..+||.|+++|+||||||+|++++++|+
T Consensus         2 ~f-~yh~y~em~~~L~~la~~yP~i~~l~sIGkS~EGR~L~~l~Is~~~~~~~~~kP~v~~~g~iHgrE~ig~~~~l~li   80 (405)
T cd03869           2 DF-KHHNYKDMRQLMKVVNEMCPNITRIYNIGKSYQGLKLYAMEISDNPGEHELGEPEFRYVAGMHGNEVLGRELLLLLM   80 (405)
T ss_pred             CC-ccCCHHHHHHHHHHHHHHCCCceEEEEeEECcCCceEEEEEEecCCccccCCCCeEEEEcccCCCcHHHHHHHHHHH
Confidence            56 7899999999999999999999999999999999999999999876 345589999999999999999999999999


Q ss_pred             HHHHHHhccCChhHHHhhcCceEEEEeccCccccccccccc---ccCCCCCCCccCcCCCCCCCc----ccCCC------
Q psy8322         103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGN---CRSGRGRNNINNHDLNRQFPD----YFRHN------  169 (651)
Q Consensus       103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~---r~~~~~r~n~~GvDLNRnf~~----~w~~~------  169 (651)
                      ++||++|...|+++++||++++|+|+|++|||||+++++++   |.|.++|.||+|||||||||+    +|...      
T Consensus        81 ~~L~~~y~~~d~~v~~Ll~~~~i~IvP~~NPDG~e~s~~~~~~~~~Wrk~R~na~GVDLNRNFp~~~~~~W~~~~~~~~~  160 (405)
T cd03869          81 QFLCQEYLAGNPRVVHLVEETRIHLLPSMNPDGYEKAYEAGSELGGWALGRWTEEGIDINHNFPDLNTILWEAEDKKKVP  160 (405)
T ss_pred             HHHHHhhhcCCHHHHHHHhcCeEEEEeeeCCchhhhhhhcCccccccccCccCCCCccccCCCccccccccccccccccc
Confidence            99999986679999999999999999999999999998764   345667899999999999995    78643      


Q ss_pred             ----CCCCCC---CCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHh
Q psy8322         170 ----RSNIPT---LVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRH  242 (651)
Q Consensus       170 ----~s~~p~---y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (651)
                          ++.+||   |+|+.|++||||+||++|+++++++++.++|||..++.|||+++....                   
T Consensus       161 ~~~~~~~~Pc~~~Y~G~~~~sEPET~Av~~~i~~~~FvLSanlHgG~lv~~YPyd~~~~~~-------------------  221 (405)
T cd03869         161 RKVPNHHIPIPEWYLSENATVAPETRAVIAWMEKIPFVLGANLQGGELVVSYPYDMTRTPW-------------------  221 (405)
T ss_pred             ccccccCCCCccccCCCCCCCcHHHHHHHHHHHhCCceEEEEecCccEEEEcCcccccCCc-------------------
Confidence                134688   999999999999999999999999999999999999999999963220                   


Q ss_pred             hcccCCccccccccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEec
Q psy8322         243 NRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVG  322 (651)
Q Consensus       243 ~~~~~~~~~~~~~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~  322 (651)
                                                            +.   ..|                                  
T Consensus       222 --------------------------------------~~---~~~----------------------------------  226 (405)
T cd03869         222 --------------------------------------AT---QEA----------------------------------  226 (405)
T ss_pred             --------------------------------------cc---cCC----------------------------------
Confidence                                                  00   011                                  


Q ss_pred             cccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCC
Q psy8322         323 NIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVT  402 (651)
Q Consensus       323 ~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~  402 (651)
                                                                                                      
T Consensus       227 --------------------------------------------------------------------------------  226 (405)
T cd03869         227 --------------------------------------------------------------------------------  226 (405)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCChHHHHHHHHHhhccCCCCcCCC--CCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEeccc
Q psy8322         403 KNKPALTPDTDVFLHLASTYARLHPTMHMKR--PCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCC  480 (651)
Q Consensus       403 ~~~~~~~~~~~~f~~l~~~~a~~~~~~~~~~--~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~  480 (651)
                          ..+||+++|+.||..||.+|+.|+...  +|... ...+.+||+||+.|||++|||+||.|.+++|+++|+||+||
T Consensus       227 ----~~tpDd~~Fr~LA~~Ya~~h~~M~~~~~~~c~~~-~~~~~~GitNGa~Wy~~~GgmqD~nY~~~ncfEiTlElsc~  301 (405)
T cd03869         227 ----TPTPDDAVFRWLATSYASTHLLMTDASRRVCHTE-DFQKEDGIINGASWHTVAGSMNDFSYLHTNCFELSVYLGCD  301 (405)
T ss_pred             ----CCCCCHHHHHHHHHHHHHhCHHhhcCCCCCCCCc-ccccCCCceeCCeeccCCCcccchhhhccCeEEEEEeccCC
Confidence                248999999999999999999998753  68753 23568999999999999999999999999999999999999


Q ss_pred             CCCCCCCcchhhhhchHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEe
Q psy8322         481 RYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKE  560 (651)
Q Consensus       481 ~~p~~~~i~~~w~~nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~  560 (651)
                      |||++++|+.+|.+||++|+.++.+++.||+|.|+|++|.||++|+|.|.|.++.++|..+|.|++.|.||+|+|++++.
T Consensus       302 K~P~~~~L~~~W~~N~~all~~~~~vh~GikG~V~d~~g~~i~~a~i~v~g~~~~v~t~~~GdywRll~pG~y~v~~~a~  381 (405)
T cd03869         302 KFPHESELPEEWENNKESLLVFMEQVHRGIKGVVRDKTGKGIPNAIISVEGINHDIRTASDGDYWRLLNPGEYRVTAHAE  381 (405)
T ss_pred             CCCChHHHHHHHHHHHHHHHHHHHHHhcCceEEEECCCCCcCCCcEEEEecCccceeeCCCCceEEecCCceEEEEEEec
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             eeeeEEEEEEeeCC-CceEEEEEE
Q psy8322         561 GYELFRDRIKIPES-TSPVVGAVL  583 (651)
Q Consensus       561 Gy~~~~~~v~v~~~-~~~~~~~~L  583 (651)
                      ||.+.++.++|... ..+.++|+|
T Consensus       382 gy~~~~~~~~v~~~~~~~~~~f~l  405 (405)
T cd03869         382 GYTSSTKNCEVGYEMGPTQCNFTL  405 (405)
T ss_pred             CCCcccEEEEEcCCCCceeeccCC
Confidence            99999999988754 455677654

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro

>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=100.00  E-value=3.8e-85  Score=694.82  Aligned_cols=371  Identities=40%  Similarity=0.762  Sum_probs=341.2

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRL  101 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~  101 (651)
                      .+| +||+|+||.++|++|+++||+++++++||+|+|||+|++++|++++ .+..+||.|+++|+||||||+|++++++|
T Consensus         2 ~~f-~~h~y~ei~~~l~~l~~~~P~i~~l~~IG~S~eGR~I~~l~Is~~~~~~~~~kp~v~~~g~iHg~E~ig~~~~l~l   80 (375)
T cd03863           2 VDF-RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEPGEPEFKYIGNMHGNEVVGRELLLNL   80 (375)
T ss_pred             CCC-ccCCHHHHHHHHHHHHHHCCCcEEEEEcccCCccceEEEEEEecCCCcccCCCCeEEEEccccCCcHHHHHHHHHH
Confidence            356 7899999999999999999999999999999999999999999865 34568999999999999999999999999


Q ss_pred             HHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCC
Q psy8322         102 LEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQ  181 (651)
Q Consensus       102 ~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~  181 (651)
                      +++||++| +.|++++.||++++|+|||++|||||+++++++|.+.++|.||+|||||||||++|...          ..
T Consensus        81 i~~L~~~y-~~d~~v~~ll~~~~i~IvP~~NPDG~e~~~~~~~~~~~~R~n~~GVDLNRNfp~~~~~~----------~~  149 (375)
T cd03863          81 IEYLCKNF-GTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQV----------TD  149 (375)
T ss_pred             HHHHHHhc-cCCHHHHHHHhCCEEEEEeccCCchHHheecCCcccccccccCCCcccccCCccccccC----------CC
Confidence            99999998 78999999999999999999999999999999997778899999999999999999753          34


Q ss_pred             CCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccc
Q psy8322         182 SIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEV  261 (651)
Q Consensus       182 ~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (651)
                      .+||||+||++|++++++.+++++|||+++++||||++...                                       
T Consensus       150 ~~EpEt~Av~~~~~~~~f~l~~~lHsg~~~~~yPy~~~~~~---------------------------------------  190 (375)
T cd03863         150 PPQPETLAVMSWLKSYPFVLSANLHGGSLVVNYPFDDDEQG---------------------------------------  190 (375)
T ss_pred             CCcHHHHHHHHHHhhCCceEEEEecCCCEEEEccCcCCCcc---------------------------------------
Confidence            67999999999999999999999999999999999995100                                       


Q ss_pred             hhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHH
Q psy8322         262 QAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEY  341 (651)
Q Consensus       262 g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~  341 (651)
                                          .   ..|                                                     
T Consensus       191 --------------------~---~~~-----------------------------------------------------  194 (375)
T cd03863         191 --------------------I---AIY-----------------------------------------------------  194 (375)
T ss_pred             --------------------c---ccC-----------------------------------------------------
Confidence                                0   011                                                     


Q ss_pred             HHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHH
Q psy8322         342 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLAST  421 (651)
Q Consensus       342 l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~  421 (651)
                                                                                       ..+||++.|+.||..
T Consensus       195 -----------------------------------------------------------------~~~pd~~~~~~la~~  209 (375)
T cd03863         195 -----------------------------------------------------------------SKSPDDAVFQQLALS  209 (375)
T ss_pred             -----------------------------------------------------------------CCCCCHHHHHHHHHH
Confidence                                                                             137899999999999


Q ss_pred             hhccCCCCcCCCCCCCCcc-ccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHH
Q psy8322         422 YARLHPTMHMKRPCPGNTV-LKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALI  500 (651)
Q Consensus       422 ~a~~~~~~~~~~~~~~~~~-~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all  500 (651)
                      |+.+|+.|+.+.+|..... ..|.+||+||+.|||++|||+||+|..++|+++|+||+|||||++++|+.+|.+||++|+
T Consensus       210 ~a~a~~~m~~~~~c~~~~~~~~~~~Gi~nga~wY~~~GgmqDw~y~~~~~~e~T~El~~~k~p~~~~l~~~w~~n~~all  289 (375)
T cd03863         210 YSKENKKMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKEEELPKYWEQNRRSLL  289 (375)
T ss_pred             HHHHHHHHhcCCCCccccccccCCCCccCCceEEecCCChhhhhhhhcCeEEEEEecCcccCCCHHHHHHHHHHHHHHHH
Confidence            9999999999888985433 357899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhccceeEEEEc-CCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEE
Q psy8322         501 SWLQQVHRGVKGLVLD-ETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVV  579 (651)
Q Consensus       501 ~~~aqa~~~i~G~V~D-~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~  579 (651)
                      .++.+++++|+|+|+| .+|+||++|+|.|.|++++++||.+|.|++.|++|+|+|+||++||+++++.|.|..++...+
T Consensus       290 ~~~~~~~~gI~G~V~D~~~g~pl~~AtV~V~g~~~~~~Td~~G~f~~~l~pG~ytl~vs~~GY~~~~~~v~V~~~~~~~~  369 (375)
T cd03863         290 QFMKQVHRGVRGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVPGTYKVTASARGYDPVTKTVEVDSKGAVQV  369 (375)
T ss_pred             HHHHHhcCeEEEEEEeCCCCCCCCCeEEEEecCcCceEECCCccEEEccCCeeEEEEEEEcCcccEEEEEEEcCCCcEEE
Confidence            9999999999999999 589999999999999999999999999988899999999999999999999999988888889


Q ss_pred             EEEEee
Q psy8322         580 GAVLES  585 (651)
Q Consensus       580 ~~~L~~  585 (651)
                      +|.|++
T Consensus       370 ~~~L~~  375 (375)
T cd03863         370 NFTLSR  375 (375)
T ss_pred             EEEecC
Confidence            998863

4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac

>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3

Probab=100.00  E-value=1.4e-83  Score=685.63  Aligned_cols=379  Identities=40%  Similarity=0.712  Sum_probs=339.4

Q ss_pred             CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322          28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV  106 (651)
Q Consensus        28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~  106 (651)
                      ||+|+||.++|++|+++||+++++++||+|+|||+|++++|++++ .+...||.|+++|+|||+||+|++++++|+++||
T Consensus         1 ~h~y~em~~~L~~l~~~yP~i~~l~sIG~SveGR~i~~l~is~~~~~~~~~kp~v~~~g~iHg~E~ig~e~ll~l~~~L~   80 (392)
T cd03864           1 HHRYDDLVRALYAVQNECPYITRIYSIGRSVEGRHLYVLEFSDNPGIHEPLEPEFKYVGNMHGNEVLGRELLIQLSEFLC   80 (392)
T ss_pred             CCCHHHHHHHHHHHHHHCCCeEEEEEeeeccCCceEEEEEecCCCccccCCCCEEEEEcccCCCcHHHHHHHHHHHHHHH
Confidence            799999999999999999999999999999999999999999876 3456799999999999999999999999999999


Q ss_pred             HHhccCChhHHHhhcCceEEEEeccCcccccccccccccC---CCCCCCccCcCCCCCCCcccCC-------CC--CCCC
Q psy8322         107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS---GRGRNNINNHDLNRQFPDYFRH-------NR--SNIP  174 (651)
Q Consensus       107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~---~~~r~n~~GvDLNRnf~~~w~~-------~~--s~~p  174 (651)
                      ++|..+|+++++||++++|+|||++|||||+++.++++..   ..+|.||+|||||||||..|..       .+  ...|
T Consensus        81 ~~y~~~d~~v~~lL~~~~i~ivP~~NPDG~e~~~~~~~~~~~~~~~R~Na~GVDLNRNFp~~~~~~~~~~~~~g~~~~~P  160 (392)
T cd03864          81 EEYRNGNERITRLIQDTRIHILPSMNPDGYEVAARQGPEFNGYLVGRNNANGVDLNRNFPDLNTLMYYNEKYGGPNHHLP  160 (392)
T ss_pred             HhcccCCHHHHHHHhcCeEEEEeeeCCchHHhhhccCCCcCccccccccccCcccccCCCcccccchhhhccCCccccCC
Confidence            9885568999999999999999999999999988755422   3579999999999999977531       11  1357


Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcccccc
Q psy8322         175 TLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTS  254 (651)
Q Consensus       175 ~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (651)
                      |+....+++||||+||++|+++++|++++++|||..++.|||+++....                               
T Consensus       161 ~~~~~~~~~epET~Av~~~~~~~~fvls~nlHgG~~v~~YPyd~~~~~~-------------------------------  209 (392)
T cd03864         161 LPDNWKSQVEPETLAVIQWMQNYNFVLSANLHGGAVVANYPYDKSREPR-------------------------------  209 (392)
T ss_pred             CccccccccCHHHHHHHHHHHhcCcEEEEEccCCceeeeCCcccccccc-------------------------------
Confidence            7766678999999999999999999999999999999999999963220                               


Q ss_pred             ccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHH
Q psy8322         255 QSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREI  334 (651)
Q Consensus       255 ~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~  334 (651)
                                              .++      +                                     |        
T Consensus       210 ------------------------~~~------~-------------------------------------~--------  214 (392)
T cd03864         210 ------------------------VRG------F-------------------------------------R--------  214 (392)
T ss_pred             ------------------------ccc------c-------------------------------------c--------
Confidence                                    000      0                                     0        


Q ss_pred             HHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHH
Q psy8322         335 ILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDV  414 (651)
Q Consensus       335 ~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~  414 (651)
                                                                                          +.....+||+++
T Consensus       215 --------------------------------------------------------------------~~~~~~tpDd~~  226 (392)
T cd03864         215 --------------------------------------------------------------------RTAYSPTPDDKL  226 (392)
T ss_pred             --------------------------------------------------------------------ccccCCCCChHH
Confidence                                                                                001135899999


Q ss_pred             HHHHHHHhhccCCCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhh
Q psy8322         415 FLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRS  494 (651)
Q Consensus       415 f~~l~~~~a~~~~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~  494 (651)
                      |++||..||.+|+.|+.+..|.+    .|.+||+||+.|||++|||+||.|.+++|+++|+||+|||||++++|+.+|.+
T Consensus       227 f~~la~~ya~~h~~m~~~~~c~~----~f~~gitnGa~wy~~~GgmqD~~Y~~~nc~e~t~el~c~k~p~~~~l~~~w~~  302 (392)
T cd03864         227 FQKLAKTYSYAHGWMHKGWNCGD----YFDEGITNGASWYSLSKGMQDFNYLHTNCFEITLELSCDKFPPEEELEREWLG  302 (392)
T ss_pred             HHHHHHHHHHhCCcccCCCCCcc----cCCCCcccCceeEecCCCchhhhhhccCeeEEEEeccccCCCCHHHHHHHHHH
Confidence            99999999999999999888964    57899999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCC
Q psy8322         495 NQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPES  574 (651)
Q Consensus       495 nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~  574 (651)
                      ||++|+.++.+++.+|+|+|+|++|+||++|+|.|.+.+++++||.+|.|++.|+||+|+|+||+.||++++++|+|..+
T Consensus       303 n~~all~~~~~~~~gI~G~V~D~~g~pi~~A~V~v~g~~~~~~T~~~G~y~r~l~pG~Y~l~vs~~Gy~~~t~~v~V~~~  382 (392)
T cd03864         303 NREALISYIEQVHQGIKGMVTDENNNGIANAVISVSGISHDVTSGTLGDYFRLLLPGTYTVTASAPGYQPSTVTVTVGPA  382 (392)
T ss_pred             HHHHHHHHHHHhcCeEEEEEECCCCCccCCeEEEEECCccceEECCCCcEEecCCCeeEEEEEEEcCceeEEEEEEEcCC
Confidence            99999999999999999999999999999999999999999999999999888999999999999999999999999877


Q ss_pred             CceEEEEEEe
Q psy8322         575 TSPVVGAVLE  584 (651)
Q Consensus       575 ~~~~~~~~L~  584 (651)
                      +.+.++|.|+
T Consensus       383 ~~~~~df~L~  392 (392)
T cd03864         383 EATLVNFQLK  392 (392)
T ss_pred             CcEEEeeEeC
Confidence            7777888774

4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu

>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3

Probab=100.00  E-value=4.8e-83  Score=678.49  Aligned_cols=381  Identities=40%  Similarity=0.753  Sum_probs=335.5

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322          24 SFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLL  102 (651)
Q Consensus        24 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~  102 (651)
                      +| +||+|+||.++|++|+++||+++++++||+|+|||+|++|+|++++ .+.++||.|+++|+|||+||+|++++++|+
T Consensus         2 ~f-~Yh~y~e~~~~L~~l~~~~p~i~~l~~IG~S~eGR~I~~l~Is~~~~~~~~~kP~v~i~g~iHg~E~ig~~~~l~l~   80 (402)
T cd03865           2 SF-EYHRYPELREALVSVWLQCPSISRIYTVGRSFEGRELLVIEMSDNPGEHEPGEPEFKYIGNMHGNEAVGRELLIYLA   80 (402)
T ss_pred             Cc-ccCCHHHHHHHHHHHHHHCCCceEEEecccccCCCeEEEEEeecCCCCCCCCCCEEEEECCcCCCcHHHHHHHHHHH
Confidence            56 8999999999999999999999999999999999999999999866 345689999999999999999999999999


Q ss_pred             HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccc--c-ccCCCCCCCccCcCCCCCCCcccCC-------CCCC
Q psy8322         103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG--N-CRSGRGRNNINNHDLNRQFPDYFRH-------NRSN  172 (651)
Q Consensus       103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~--~-r~~~~~r~n~~GvDLNRnf~~~w~~-------~~s~  172 (651)
                      ++||.+|...|+++++||++++|+|||++|||||+++.+.  + +.+..+|.||+|||||||||..+..       +++.
T Consensus        81 ~~L~~~y~~~d~~v~~LLd~~~i~IvP~~NPDG~e~~~~~~~~~~~w~~~R~Na~GvDLNRNFp~~~~~~~~~~~~~~~~  160 (402)
T cd03865          81 QYLCNEYQKGNETIINLIHSTRIHIMPSLNPDGFEKAASQPGELKDWFVGRSNAQGIDLNRNFPDLDRIVYVNEREGGPN  160 (402)
T ss_pred             HHHHHhcccCCHHHHHHHhcCEEEEEeeeCCchHHhhhhcCccccchhhhcccccCcccCCCCCcccchhhhhhccCCCc
Confidence            9999988445899999999999999999999999998653  2 3456689999999999999976321       1122


Q ss_pred             CC---CCCCC---CCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhccc
Q psy8322         173 IP---TLVST---SQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSN  246 (651)
Q Consensus       173 ~p---~y~G~---~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (651)
                      ++   .+.++   ....+|||+|+++|+++++|+++.++|||..++.|||+.+....                       
T Consensus       161 ~~~~~~~~~~~~~~~~~~pEt~Avm~w~~~~~FvlsanlHgG~lva~YP~D~~~~~~-----------------------  217 (402)
T cd03865         161 NHLLKNMKKAVDENTKLAPETKAVIHWIMDIPFVLSANLHGGDLVANYPYDETRSGS-----------------------  217 (402)
T ss_pred             cccccccccccccccCCChHHHHHHHHHHhCCcEEEEEccCccEEEECCCCCCCCCC-----------------------
Confidence            11   12222   23678999999999999999999999999999888888852110                       


Q ss_pred             CCccccccccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccC
Q psy8322         247 IPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHG  326 (651)
Q Consensus       247 ~~~~~~~~~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~  326 (651)
                                                        ..    .|                                      
T Consensus       218 ----------------------------------~~----~~--------------------------------------  221 (402)
T cd03865         218 ----------------------------------AH----EY--------------------------------------  221 (402)
T ss_pred             ----------------------------------cc----cc--------------------------------------
Confidence                                              00    11                                      


Q ss_pred             CCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCC
Q psy8322         327 DEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKP  406 (651)
Q Consensus       327 ~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~  406 (651)
                                                                                                      
T Consensus       222 --------------------------------------------------------------------------------  221 (402)
T cd03865         222 --------------------------------------------------------------------------------  221 (402)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCChHHHHHHHHHhhccCCCCcCC--CCCCCCc-cccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCC
Q psy8322         407 ALTPDTDVFLHLASTYARLHPTMHMK--RPCPGNT-VLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYP  483 (651)
Q Consensus       407 ~~~~~~~~f~~l~~~~a~~~~~~~~~--~~~~~~~-~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p  483 (651)
                      ..+||+++|++||..||.+|+.|+..  .+|.... ...|.+||+||+.|||++|||+||.|.+++|+++|+||+|||||
T Consensus       222 s~~pDd~~f~~lA~~Ya~~h~~m~~~~~~~c~~~~~~~~f~~GitNGa~Wy~~~GgmqD~ny~~~nc~eiT~El~c~K~P  301 (402)
T cd03865         222 SACPDDAIFKSLARAYSSLNPAMSDPNRPPCRKNDDDSSFVDGTTNGGAWYSVPGGMQDFNYLSSNCFEITVELSCDKFP  301 (402)
T ss_pred             cCCCChHHHHHHHHHHHhhCHHhhcCCCCCCCCCCccccCCCCeecCceecccCCcccchhhhccCceEEEEEecCCCCC
Confidence            24899999999999999999999874  4698653 35789999999999999999999999999999999999999999


Q ss_pred             CCCCcchhhhhchHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeee
Q psy8322         484 APSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYE  563 (651)
Q Consensus       484 ~~~~i~~~w~~nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~  563 (651)
                      ++++|+.+|++||++|+.+++|++.+|+|+|+|++|+||++|+|.|++.+++++||.+|.|++.|+||+|+|+|++.||+
T Consensus       302 ~~~~L~~~W~~n~~all~~~~q~~~gI~G~V~D~~g~pI~~AtV~V~g~~~~~~T~~~G~Y~~~L~pG~Ytv~vsa~Gy~  381 (402)
T cd03865         302 PEETLKQYWEDNKNSLVNYIEQVHRGVKGFVKDLQGNPIANATISVEGIDHDITSAKDGDYWRLLAPGNYKLTASAPGYL  381 (402)
T ss_pred             CHHHHHHHHHHHHHHHHHHHHHhccceEEEEECCCCCcCCCeEEEEEcCccccEECCCeeEEECCCCEEEEEEEEecCcc
Confidence            99999999999999999999999999999999999999999999999999999999999998899999999999999999


Q ss_pred             eEEEEEEeeCCCceEEEEEEe
Q psy8322         564 LFRDRIKIPESTSPVVGAVLE  584 (651)
Q Consensus       564 ~~~~~v~v~~~~~~~~~~~L~  584 (651)
                      ++++.|+|..++...++|.|+
T Consensus       382 ~~~~~V~V~~~~~~~vdf~Le  402 (402)
T cd03865         382 AVVKKVAVPYSPAVRVDFELE  402 (402)
T ss_pred             cEEEEEEEcCCCcEEEeEEeC
Confidence            999999998888888998885

4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe

>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=100.00  E-value=6.2e-83  Score=676.87  Aligned_cols=360  Identities=35%  Similarity=0.641  Sum_probs=334.8

Q ss_pred             CCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHHHH
Q psy8322          27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHL  105 (651)
Q Consensus        27 ~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L  105 (651)
                      +||+|+||.++|++|+++||+++++++||+|+|||+|++|+|++++ .+..+||.|+++||||||||+|++++++|+++|
T Consensus         1 ~Yh~y~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~l~~l~Is~~~~~~~~~kp~v~~~~giHg~E~ig~e~~l~l~~~L   80 (363)
T cd06245           1 RYHHYKELSEFLRGLTLNYPHITNLTSLGQSVEFRPILSLEISNKPNNSEPEEPKIRFVAGIHGNAPVGTELLLALAEFL   80 (363)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCceEEEEEecCCCCCCCCCCCEEEEECCccCCcHHHHHHHHHHHHHH
Confidence            5999999999999999999999999999999999999999999876 345689999999999999999999999999999


Q ss_pred             HHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcH
Q psy8322         106 VVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDP  185 (651)
Q Consensus       106 ~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sep  185 (651)
                      |++| +.|++++.||++++|+|||++|||||+++++++++...+|.||+|||||||||+.|          .|+.|+|||
T Consensus        81 ~~~y-~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~~~~r~na~GvDLNRNf~~~~----------~g~~~~sep  149 (363)
T cd06245          81 CMNY-GKNPAVTKLIDRTRIVIVPSLNPDGREKAQEKQCTSKEGHTNAHGKDLDTDFTSNA----------SNMSADVQP  149 (363)
T ss_pred             HHHc-cCCHHHHHHHhCCEEEEEeccCCchHHHeecCCCcccCCCCCcccccCCCCCCccc----------CCCCCCCcH
Confidence            9998 78999999999999999999999999999988875556789999999999999754          477999999


Q ss_pred             HHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccchhhh
Q psy8322         186 EVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVI  265 (651)
Q Consensus       186 Et~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~  265 (651)
                      ||+||++|+++.++.+++++|||+++++||||++..                                            
T Consensus       150 Et~Av~~~~~~~~f~l~~~lH~~~~~~~yPy~~~~~--------------------------------------------  185 (363)
T cd06245         150 ETKAIIDNLISKDFTLSVALDGGSVVATYPYDKPVQ--------------------------------------------  185 (363)
T ss_pred             HHHHHHHHHHhCCceEEEEEcCCcEEEEecCCCCCc--------------------------------------------
Confidence            999999999999999999999999999999998410                                            


Q ss_pred             cccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHh
Q psy8322         266 DWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVE  345 (651)
Q Consensus       266 dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~  345 (651)
                                                                                                      
T Consensus       186 --------------------------------------------------------------------------------  185 (363)
T cd06245         186 --------------------------------------------------------------------------------  185 (363)
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             hccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhhcc
Q psy8322         346 YIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYARL  425 (651)
Q Consensus       346 y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a~~  425 (651)
                                                                                    .+||.+.|+.||..|+.+
T Consensus       186 --------------------------------------------------------------~~pd~~~~~~la~~~a~a  203 (363)
T cd06245         186 --------------------------------------------------------------TVENKETLKHLAKVYANN  203 (363)
T ss_pred             --------------------------------------------------------------CCCCHHHHHHHHHHHHHh
Confidence                                                                          146788999999999999


Q ss_pred             CCCCcCCCC-CCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHHHH
Q psy8322         426 HPTMHMKRP-CPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQ  504 (651)
Q Consensus       426 ~~~~~~~~~-~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~~a  504 (651)
                      |+.|+...+ |+......|.+||+||+.|||++|+|+||+|...+|+++|+||+|||||++++|+.+|++||++++.++.
T Consensus       204 h~~m~~~~~~c~~~~~~~~~~Gitnga~wy~~~g~mqd~~y~~~~~~e~t~e~~~~k~P~~~~l~~~w~~n~~all~~~~  283 (363)
T cd06245         204 HPTMHLGQPGCPNNSDENIPGGVMRGAEWNSHLGSMKDFSVDFGHCPEITVYTSCCLFPSASQLPDLWAENKKSLLSMIV  283 (363)
T ss_pred             ChhhhcCCCCCCCCcccccCCCccccceeecccCCcchhhhhhcCCceeEEEeccccCCCHHHHHHHHHHHHHHHHHHHH
Confidence            999998765 8765556789999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEEEEEEe
Q psy8322         505 QVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLE  584 (651)
Q Consensus       505 qa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~  584 (651)
                      +++.+|+|+|+|.+|+||++|+|.|.+.. +++||.+|.|++.|++|+|+|+|+++||++++++|.|..+....++|+|+
T Consensus       284 ~~~~gI~G~V~d~~g~pi~~A~V~v~g~~-~~~T~~~G~y~~~L~pG~y~v~vs~~Gy~~~~~~V~v~~~~~~~~~f~L~  362 (363)
T cd06245         284 EAHKGVHGVVTDKAGKPISGATIVLNGGH-RVYTKEGGYFHVLLAPGQHNINVIAEGYQQEHLPVVVSHDEASSVKIVLD  362 (363)
T ss_pred             HcCcEEEEEEEcCCCCCccceEEEEeCCC-ceEeCCCcEEEEecCCceEEEEEEEeCceeEEEEEEEcCCCeEEEEEEec
Confidence            99999999999999999999999999976 89999999997779999999999999999999999998888788888885

4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a

>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=6e-78  Score=642.35  Aligned_cols=359  Identities=42%  Similarity=0.826  Sum_probs=324.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322          24 SFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLL  102 (651)
Q Consensus        24 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~  102 (651)
                      +| +||+|+||.++|++|+++||+++++++||+|+|||+|++++|++++ .+..+||.|+++|+||||||+|++++++|+
T Consensus         2 ~~-~Y~~~~ei~~~l~~l~~~~p~i~~l~~IG~S~eGR~i~~l~ig~~~~~~~~~~P~v~~~~~iHg~E~ig~~~~l~l~   80 (376)
T cd03866           2 DF-NYHNTEQMEAYLKDVNKNYPSITHLHSIGQSVEGRELWVLVLGRFPREHRIGIPEFKYVANMHGNEVVGRELLLHLI   80 (376)
T ss_pred             Cc-ccCCHHHHHHHHHHHHHhCCCcEEEEEeeccCCCceEEEEEeccCCccccCCCCeEEEEcccCCCcHHHHHHHHHHH
Confidence            45 8999999999999999999999999999999999999999999865 345679999999999999999999999999


Q ss_pred             HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCC
Q psy8322         103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQS  182 (651)
Q Consensus       103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~  182 (651)
                      ++||++| +.|+++++||++++|+|||++|||||++++ .+|.+.++|.||+|||||||||++|...          ...
T Consensus        81 ~~L~~~y-~~d~~i~~lL~~~~i~ivP~~NPDG~e~~~-~~~~~~~~R~N~~GvDLNRnf~~~w~~~----------~~~  148 (376)
T cd03866          81 DYLVTSY-GSDPVITRLLNSTRIHIMPSMNPDGFEASK-PDCYYSVGRYNKNGYDLNRNFPDAFEEN----------NEQ  148 (376)
T ss_pred             HHHHHhc-CCCHHHHHHHhCCEEEEEeccCCchhhhcc-cccccccccccCCCcccCcCchhhhccC----------CCC
Confidence            9999988 789999999999999999999999999985 6676667899999999999999999764          235


Q ss_pred             CcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccch
Q psy8322         183 IDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQ  262 (651)
Q Consensus       183 sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  262 (651)
                      +|||++||++|+++++|.+++++|||+++++|||+++....                                       
T Consensus       149 sepEt~al~~~~~~~~~~l~~~~H~~~~~~~YP~~~~~~~~---------------------------------------  189 (376)
T cd03866         149 RQPETRAVMEWLKSETFVLSANLHGGALVASYPYDNGNGGT---------------------------------------  189 (376)
T ss_pred             CcHHHHHHHHHHHhcCcEEEEEccCCceEEeccccCCCCcc---------------------------------------
Confidence            99999999999999999999999999999999999962110                                       


Q ss_pred             hhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHH
Q psy8322         263 AVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYL  342 (651)
Q Consensus       263 ~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l  342 (651)
                                        +.    .                                                       
T Consensus       190 ------------------~~----~-------------------------------------------------------  192 (376)
T cd03866         190 ------------------GQ----Q-------------------------------------------------------  192 (376)
T ss_pred             ------------------cc----c-------------------------------------------------------
Confidence                              00    0                                                       


Q ss_pred             HHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         343 VVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       343 ~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                                                                                   .....+|+...|+.|+..|
T Consensus       193 -------------------------------------------------------------~~~~~~pd~~~~~~la~~~  211 (376)
T cd03866         193 -------------------------------------------------------------GYRSVSPDDDVFVHLAKTY  211 (376)
T ss_pred             -------------------------------------------------------------cCCCCCCCHHHHHHHHHHH
Confidence                                                                         0001378999999999999


Q ss_pred             hccCCCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHH
Q psy8322         423 ARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISW  502 (651)
Q Consensus       423 a~~~~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~  502 (651)
                      +.+|+.|+.+..|..  ...|..||+|++.|||++|+|+||+|..++|+++|+||+|||||++++|+++|++|+++++.+
T Consensus       212 a~~~~~~~~g~~~~~--~~~~~~Gi~nga~~Y~~sG~~~Dw~y~~~~~~~~T~El~~~k~p~~~~l~~~w~~n~~~ll~~  289 (376)
T cd03866         212 SYNHANMYKGNHCSD--KQSFPSGITNGYQWYPLQGGMQDYNYVWAQCFEITLELSCCKYPPEEQLPAFWEDNKAALIEY  289 (376)
T ss_pred             HHhCHHhhCCCCCCc--cccCCCCcccceEEEEcCCCchhhhhhhCceEEEEEEecCCCCCCHHHHHHHHHHhHHHHHHH
Confidence            999999997777875  357899999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhccceeEEEEcCCCCcccceEEEEeeeee--eeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCC
Q psy8322         503 LQQVHRGVKGLVLDETGSRLANVSISLAYKNV--SFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPES  574 (651)
Q Consensus       503 ~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~--~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~  574 (651)
                      +++++.+|+|+|+|.+|+||++|+|.|.++..  .++||.+|.|++.++||+|+|+|++.||+++++++.+..+
T Consensus       290 i~q~~~gI~G~V~D~~g~pi~~A~V~v~g~~~~~~~~T~~~G~y~~~l~pG~Y~v~vsa~Gy~~~~~~v~v~~~  363 (376)
T cd03866         290 IKQVHLGVKGQVFDSNGNPIPNAIVEVKGRKHICPYRTNVNGEYFLLLLPGKYMINVTAPGFKTVITNVIIPYN  363 (376)
T ss_pred             HHHhcCceEEEEECCCCCccCCeEEEEEcCCceeEEEECCCceEEEecCCeeEEEEEEeCCcceEEEEEEeCCC
Confidence            99999999999999999999999999998764  4589999999878999999999999999999999888754

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont

>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=1.3e-77  Score=645.28  Aligned_cols=374  Identities=41%  Similarity=0.753  Sum_probs=332.2

Q ss_pred             CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322          28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV  106 (651)
Q Consensus        28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~  106 (651)
                      ||+|+||.++|++|+++||+++++++||+|+|||+|++|+|++++ .+...||.|+++||||||||+|++++++|+++||
T Consensus         1 y~~y~ei~~~l~~la~~~p~~~~~~~iG~S~EGR~i~~l~is~~~~~~~~~kp~v~i~~giHg~E~ig~~~~~~l~~~L~   80 (395)
T cd03867           1 HHSYSQMVSVLKRTAARCSHIARTYSIGRSFEGRDLLVIEFSSNPGQHELLEPEVKYIGNMHGNEVLGRELLIYLAQFLC   80 (395)
T ss_pred             CCCHHHHHHHHHHHHHhCCCceEEEEccccCCCceEEEEEeccCCCcccccCCeEEEEccccCCcHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999865 3345689999999999999999999999999999


Q ss_pred             HHhccCChhHHHhhcCceEEEEeccCcccccccccccc---cCCCCCCCccCcCCCCCCCcccCC-------CC-CCC--
Q psy8322         107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC---RSGRGRNNINNHDLNRQFPDYFRH-------NR-SNI--  173 (651)
Q Consensus       107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r---~~~~~r~n~~GvDLNRnf~~~w~~-------~~-s~~--  173 (651)
                      .+|...|++++.||++++|+|||++|||||+++++++|   .|.++|.||+|||||||||+.|..       .+ +.+  
T Consensus        81 ~~~~~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~~~wr~~R~n~~GvDLNRNf~~~~~~~~~~~~~~g~~~~~~  160 (395)
T cd03867          81 SEYLLGNQRIQTLINTTRIHLLPSMNPDGYEAAASEGAGYNGWTNGRQNAQNIDLNRNFPDLTSEVYRRRRQRGARTDHI  160 (395)
T ss_pred             HhhhcCCHHHHHHhhCcEEEEEeccCCchHHhhhhcCccccccccCCcCCCCcccccCCCcchhhhcchhhcccccccCC
Confidence            98756789999999999999999999999999998775   356679999999999999999864       12 222  


Q ss_pred             CC---CCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcc
Q psy8322         174 PT---LVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTL  250 (651)
Q Consensus       174 p~---y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  250 (651)
                      ||   |.  .++|||||+||++|++++++.+++++|||+++++||||+++...+                          
T Consensus       161 p~p~~~~--~~~sepEt~Av~~~~~~~~~~l~~s~Hs~~~~~~yP~~~t~~~~~--------------------------  212 (395)
T cd03867         161 PIPDSYW--FGKVAPETKAVMKWMRSIPFVLSASLHGGDLVVSYPYDFSRHPLE--------------------------  212 (395)
T ss_pred             CCccccc--cCccCHHHHHHHHHHhhCCceEEEEccCcceeEEcccccccCccc--------------------------
Confidence            44   32  356999999999999999999999999999999999999743210                          


Q ss_pred             ccccccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcc
Q psy8322         251 VSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPI  330 (651)
Q Consensus       251 ~~~~~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~  330 (651)
                                                    ++    .|                                          
T Consensus       213 ------------------------------~~----~~------------------------------------------  216 (395)
T cd03867         213 ------------------------------EK----MF------------------------------------------  216 (395)
T ss_pred             ------------------------------cc----cc------------------------------------------
Confidence                                          00    01                                          


Q ss_pred             hHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCC
Q psy8322         331 GREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTP  410 (651)
Q Consensus       331 ~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~  410 (651)
                                                                                                  ..+|
T Consensus       217 ----------------------------------------------------------------------------~~~~  220 (395)
T cd03867         217 ----------------------------------------------------------------------------SPTP  220 (395)
T ss_pred             ----------------------------------------------------------------------------CCCC
Confidence                                                                                        1379


Q ss_pred             ChHHHHHHHHHhhccCCCCcCCC--CCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCc
Q psy8322         411 DTDVFLHLASTYARLHPTMHMKR--PCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEI  488 (651)
Q Consensus       411 ~~~~f~~l~~~~a~~~~~~~~~~--~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i  488 (651)
                      |.+.|+.||..|+.+|+.|+.+.  .|..  ..++.+||+|++.|||++|+|+||+|..++|++||+||+||||||+++|
T Consensus       221 d~~~~~~lA~~~a~a~~~~~~~~~~~~~~--~~~~~g~i~~ga~~Y~~sG~~~Dw~y~~~~~~~~T~EL~~~~~pp~~~i  298 (395)
T cd03867         221 DEKVFKMLARTYADAHPTMSDRSTRRCGG--NFHKRGGIINGAEWYSFSGGMSDFNYLHTNCFEVTVELGCDKFPPEEEL  298 (395)
T ss_pred             cHHHHHHHHHHHHHhCccccCCCCCCCcc--ccccCCCceecceeeEcCCCcchhhhhccCceEEEEEecCCCCCCHHHH
Confidence            99999999999999999998643  3654  2456889999999999999999999999999999999999999999999


Q ss_pred             chhhhhchHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEE
Q psy8322         489 PIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDR  568 (651)
Q Consensus       489 ~~~w~~nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~  568 (651)
                      +++|++|+++++.++.+++.+|+|+|+|++|+||++|+|.|.+++++++||.+|.|++.+++|+|+|+|+++||++++++
T Consensus       299 ~~~~~e~~~~l~~~~~~~~~~i~G~V~D~~g~pi~~A~V~v~g~~~~~~Td~~G~y~~~l~~G~y~l~vs~~Gy~~~~~~  378 (395)
T cd03867         299 YTIWQENKEALLSFMEMVHRGIKGFVKDKDGNPIKGARISVRGIRHDITTAEDGDYWRLLPPGIHIVSAQAPGYTKVMKR  378 (395)
T ss_pred             HHHHHHHHHHHHHHHHhccceeEEEEEcCCCCccCCeEEEEeccccceEECCCceEEEecCCCcEEEEEEecCeeeEEEE
Confidence            99999999999999999999999999999999999999999999999999999999888999999999999999999999


Q ss_pred             EEeeC--CCceEEEEEE
Q psy8322         569 IKIPE--STSPVVGAVL  583 (651)
Q Consensus       569 v~v~~--~~~~~~~~~L  583 (651)
                      |++..  +....++|+|
T Consensus       379 v~v~~~~~~~~~~d~~l  395 (395)
T cd03867         379 VTLPARMKRAGRVDFVL  395 (395)
T ss_pred             EEeCCcCCCceEeeeEC
Confidence            98864  4556777765

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.

>KOG2649|consensus

Probab=100.00  E-value=6.8e-78  Score=626.97  Aligned_cols=383  Identities=43%  Similarity=0.784  Sum_probs=334.9

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRL  101 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~  101 (651)
                      ++| .||+|++|+++|+++.++||.+.++++||||+|||+||++.|++.| +|..++|.+.++|+|||+|.+|.|.++++
T Consensus        65 l~f-~hh~y~~m~~~l~~~~~~~p~itrlYSiGkSv~Gr~L~Vle~sd~PgeH~~gePEfKyv~nmHGnE~vGRElll~L  143 (500)
T KOG2649|consen   65 LTF-GHHNYDDLEKALKDFTKRCPNITRLYSIGKSVEGRELWVIEISDRPGEHEPGEPEFKYIGNMHGNEVVGRELLLRL  143 (500)
T ss_pred             ccC-CCCCHHHHHHHHHHHHhhCCcceeeeeccccccCceEEEEEcCCCCCcccCCCCcceeeeeccccccccHHHHHHH
Confidence            777 9999999999999999999999999999999999999999999998 88999999999999999999999999999


Q ss_pred             HHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCC---------CC
Q psy8322         102 LEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNR---------SN  172 (651)
Q Consensus       102 ~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~---------s~  172 (651)
                      +++||.+| ++|+++++|+++++|+|+|.+||||||.+..++|-+.-+|.|++|+|||||||+.+..-.         ++
T Consensus       144 ~e~Lc~~y-~~n~~i~~Lv~~trIHlmPSmNPDGyE~a~~~~~~~~~GR~Nang~DLNrnFPd~~~~~~~~~~~~~~n~~  222 (500)
T KOG2649|consen  144 AEYLCDNY-GKDPRITQLVNNTRIHIMPSMNPDGYEIAKRGDRGWATGRNNANGVDLNRNFPDQFRLVYFIVTFDLLNSH  222 (500)
T ss_pred             HHHHHHhc-CCChHHHHHHhhceEEEecccCcchhhhhhcccccceecccCccccchhccCcccccceeeeeeecccccc
Confidence            99999999 999999999999999999999999999999999888889999999999999998854321         11


Q ss_pred             CCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcccc
Q psy8322         173 IPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVS  252 (651)
Q Consensus       173 ~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  252 (651)
                      .|.|.-.....+|                                                                   
T Consensus       223 l~~~~~~~~~~~p-------------------------------------------------------------------  235 (500)
T KOG2649|consen  223 LIMFNDDLNLRQP-------------------------------------------------------------------  235 (500)
T ss_pred             cccccccccccCc-------------------------------------------------------------------
Confidence            1222223333344                                                                   


Q ss_pred             ccccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchH
Q psy8322         253 TSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGR  332 (651)
Q Consensus       253 ~~~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~  332 (651)
                             ++.++|.|+..+||++++.|||++++++||||.+.             .+                 .     
T Consensus       236 -------Et~Avm~W~~~~pFvLSAnLHGG~lvanYPfD~~~-------------~~-----------------~-----  273 (500)
T KOG2649|consen  236 -------ETIAVMKWLRDIPFVLSANLHGGALVANYPFDDTE-------------DK-----------------R-----  273 (500)
T ss_pred             -------cHHHHHHHHhhcceeeeccccCCceEEEccccCCc-------------cc-----------------c-----
Confidence                   44555555555555555555555566666666400             00                 0     


Q ss_pred             HHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCCh
Q psy8322         333 EIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDT  412 (651)
Q Consensus       333 ~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~  412 (651)
                                                                                             .....+||+
T Consensus       274 -----------------------------------------------------------------------~~~s~tpDd  282 (500)
T KOG2649|consen  274 -----------------------------------------------------------------------KYYSASPDD  282 (500)
T ss_pred             -----------------------------------------------------------------------cccCCCCCc
Confidence                                                                                   011358999


Q ss_pred             HHHHHHHHHhhccCCCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhh
Q psy8322         413 DVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHW  492 (651)
Q Consensus       413 ~~f~~l~~~~a~~~~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w  492 (651)
                      .+|++||..||..|+.|+.+..|.........+||+||++||+++|||+||.|.+++||++||||+|+|||++++++.+|
T Consensus       283 ~~F~~La~~YA~~h~~M~~~~~~~~~~~~~~~~GItNGA~Wy~v~GgMqDfnYLhTNCfEiTiElgC~KfP~e~eLp~~W  362 (500)
T KOG2649|consen  283 ATFRFLARIYAKSHRNMSLGKRCECDGNNGSVGGITNGASWYPVYGGMQDWNYLHTNCFEITLELSCEKFPKESELPTLW  362 (500)
T ss_pred             HHHHHHHHHHHhhChhhhcCCCCcccccCCCcCceecCcceeecCCcccchhhhhcCeEEEEEEeccccCCchhhhHHHH
Confidence            99999999999999999998888765555555899999999999999999999999999999999999999999999999


Q ss_pred             hhchHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEee
Q psy8322         493 RSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIP  572 (651)
Q Consensus       493 ~~nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~  572 (651)
                      +.||++|+.|+.|++.||+|.|+|.+|+||++|+|.|.|.++.++|-.+|.|++.|+||.|.|++++.||.+.+++|+|.
T Consensus       363 E~Nr~sLl~f~eqvH~GIkG~V~D~~G~~I~NA~IsV~ginHdv~T~~~GDYWRLL~PG~y~vta~A~Gy~~~tk~v~V~  442 (500)
T KOG2649|consen  363 EYNRKSLLNFVEQVHRGIKGLVFDDTGNPIANATISVDGINHDVTTAKEGDYWRLLPPGKYIITASAEGYDPVTKTVTVP  442 (500)
T ss_pred             HhhHHHHHHHHHHHHhccceeEEcCCCCccCceEEEEecCcCceeecCCCceEEeeCCcceEEEEecCCCcceeeEEEeC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCceEEEEEEeeee
Q psy8322         573 ESTSPVVGAVLESLL  587 (651)
Q Consensus       573 ~~~~~~~~~~L~~~~  587 (651)
                      ......++|+|++..
T Consensus       443 ~~~a~~~df~L~~~~  457 (500)
T KOG2649|consen  443 PDRAARVNFTLQRSI  457 (500)
T ss_pred             CCCccceeEEEecCC
Confidence            877778999999865

>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=100.00  E-value=3.3e-76  Score=632.76  Aligned_cols=367  Identities=43%  Similarity=0.807  Sum_probs=330.6

Q ss_pred             CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322          28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV  106 (651)
Q Consensus        28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~  106 (651)
                      ||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++ .....||.|+++|+||||||+|++++++|+++||
T Consensus         1 Y~~y~ei~~~l~~l~~~~p~~~~l~~iG~S~eGR~i~~l~is~~~~~~~~~kp~v~~~~~iH~~E~ig~~~~l~l~~~L~   80 (372)
T cd03868           1 YHHYEELTDLLHSLAKKYPNIARLHSIGRSVEGRELWVLRITDNVNRREPGEPMFKYVGNMHGDETVGRQVLIYLAQYLL   80 (372)
T ss_pred             CCCHHHHHHHHHHHHHHCCCcEEEEeccccCCCceEEEEEEecCCCCCCCCCCeEEEECCcCCCcHHHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999875 3345799999999999999999999999999999


Q ss_pred             HHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCc
Q psy8322         107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSID  184 (651)
Q Consensus       107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~se  184 (651)
                      ++| ..|++++.||++++|+|||++|||||+++++++|  .+..+|.||+|||||||||++|+..+.       +.|+||
T Consensus        81 ~~y-~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~~~~~~~R~n~~GvDLNRnf~~~~~~~~~-------~~~~se  152 (372)
T cd03868          81 ENY-GGDERVTELVNTTDIYLMPSMNPDGFERSQEGDCSCGGYGGRENANNVDLNRNFPDQFEGKLQ-------RLSERQ  152 (372)
T ss_pred             Hhc-ccCHHHHHHHhCCEEEEEeeeCCchHHhhcccCccccCCCccCCCCCccCCCCCCcccCCcCC-------CCCCCC
Confidence            988 6899999999999999999999999999998884  455678999999999999999976532       689999


Q ss_pred             HHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccchhh
Q psy8322         185 PEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAV  264 (651)
Q Consensus       185 pEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~  264 (651)
                      |||+||++|++++++.+++++|+++++++||||++....+                                        
T Consensus       153 pEt~av~~~~~~~~~~l~~~lH~~~~~~~yP~~~~~~~~~----------------------------------------  192 (372)
T cd03868         153 PETVAMMKWIRSNPFVLSGNLHGGSVVASYPYDDSSSHNE----------------------------------------  192 (372)
T ss_pred             HHHHHHHHHHhhCCcEEEEEccCccEEEeccccccCCCCC----------------------------------------
Confidence            9999999999999999999999999999999999632200                                        


Q ss_pred             hcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHH
Q psy8322         265 IDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVV  344 (651)
Q Consensus       265 ~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~  344 (651)
                                      .+    .|                                                        
T Consensus       193 ----------------~~----~~--------------------------------------------------------  196 (372)
T cd03868         193 ----------------CG----VY--------------------------------------------------------  196 (372)
T ss_pred             ----------------Cc----cc--------------------------------------------------------
Confidence                            00    01                                                        


Q ss_pred             hhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhhc
Q psy8322         345 EYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYAR  424 (651)
Q Consensus       345 ~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a~  424 (651)
                                                                                    ..+||.+.|+.|+..|+.
T Consensus       197 --------------------------------------------------------------~~~pd~~~~~~la~~~a~  214 (372)
T cd03868         197 --------------------------------------------------------------SKSPDDAVFKYLALTYAN  214 (372)
T ss_pred             --------------------------------------------------------------CCCCCHHHHHHHHHHHHh
Confidence                                                                          137899999999999999


Q ss_pred             cCCCCcCCCC-CCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHHH
Q psy8322         425 LHPTMHMKRP-CPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWL  503 (651)
Q Consensus       425 ~~~~~~~~~~-~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~~  503 (651)
                      .|..|..+.+ |.   ...|..|+++++.|||++|+|+||+|..++|++||+||+|||||++++|+.+|++||++++.++
T Consensus       215 ~~~~~~~~~~~~~---~~~~~~G~~~~~~~Y~~~G~~~Dw~y~~~~~~~~T~El~~~~~p~~~~l~~~w~~n~~al~~~~  291 (372)
T cd03868         215 NHPTMRTGKPCCE---GETFKDGITNGAHWYDVPGGMQDYNYLHSNCFEITLELSCCKYPPASELPEEWNNNRESLLAYL  291 (372)
T ss_pred             hCHHhhCCCCCCc---cccCCCCcccCceeeeCCCCcchhhhhccCeeEEEEEecCCCCCCHHHHHHHHHHhHHHHHHHH
Confidence            9998876544 43   4578999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEE-EEeeCCCceEEEEE
Q psy8322         504 QQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDR-IKIPESTSPVVGAV  582 (651)
Q Consensus       504 aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~-v~v~~~~~~~~~~~  582 (651)
                      .+++.+|+|+|+|++|+||++|+|.|.+..++++||.+|.|.+.|++|+|+|+|++.||+++++. +.|..++...++|.
T Consensus       292 ~~~~~~i~G~V~d~~g~pv~~A~V~v~~~~~~~~td~~G~y~~~l~~G~Y~l~vs~~Gf~~~~~~~v~v~~g~~~~~~~~  371 (372)
T cd03868         292 EQVHIGVKGFVRDASGNPIEDATIMVAGIDHNVTTAKFGDYWRLLLPGTYTITAVAPGYEPSTVTDVVVKEGEATSVNFT  371 (372)
T ss_pred             HHhCCceEEEEEcCCCCcCCCcEEEEEecccceEeCCCceEEecCCCEEEEEEEEecCCCceEEeeEEEcCCCeEEEeeE
Confidence            99999999999999999999999999999899999999999878999999999999999998886 45666666667765


Q ss_pred             E
Q psy8322         583 L  583 (651)
Q Consensus       583 L  583 (651)
                      |
T Consensus       372 L  372 (372)
T cd03868         372 L  372 (372)
T ss_pred             C
Confidence            4

4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p

>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=2e-72  Score=605.78  Aligned_cols=372  Identities=48%  Similarity=0.857  Sum_probs=336.5

Q ss_pred             CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCC-CCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322          28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV-HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV  106 (651)
Q Consensus        28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~-~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~  106 (651)
                      ||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++. ....||.|+|+|++||+||+|++++++|+++|+
T Consensus         1 Y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~agiH~~E~~g~~~~~~l~~~L~   80 (374)
T cd03858           1 YHNYAELESFLKEVAANYPNITRLYSIGKSVQGRDLWVLEISDNPGVHEPGEPEFKYVGNMHGNEVVGRELLLRLAQYLC   80 (374)
T ss_pred             CCCHHHHHHHHHHHHHhCCCceEEEEcccCCCCCEEEEEEEecCCCCCCCCCceEEEeccccCCchhHHHHHHHHHHHHH
Confidence            8999999999999999999999999999999999999999998652 334799999999999999999999999999999


Q ss_pred             HHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHH
Q psy8322         107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPE  186 (651)
Q Consensus       107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepE  186 (651)
                      .+|...|+.+++||++++|+|||++|||||+++++++|.|..+|.||.|||||||||+.|...+.     +|+.|+||||
T Consensus        81 ~~~~~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~w~~~R~n~~GvDLNRnf~~~~~~~~~-----~G~~~~sepE  155 (374)
T cd03858          81 ENYGAGDPRITRLVDNTRIHIMPSMNPDGYEKAAEGDCGGLTGRYNANGVDLNRNFPDLFFTNYR-----SSDNGPRQPE  155 (374)
T ss_pred             HHhccCCHHHHHHHhCCEEEEEcccCCchhhhhcccCCcccccCCCCcceecccCCCcccccccc-----cCCCcccCHH
Confidence            98733789999999999999999999999999999998777789999999999999999987644     6999999999


Q ss_pred             HHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccchhhhc
Q psy8322         187 VQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVID  266 (651)
Q Consensus       187 t~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~d  266 (651)
                      ++||++++.+++|.+++|+|+++++++|||++++..                                            
T Consensus       156 t~al~~~~~~~~~~~~i~~Hs~~~~~~yp~~~~~~~--------------------------------------------  191 (374)
T cd03858         156 TKAVMNWIKSIPFVLSANLHGGALVANYPYDDSPSG--------------------------------------------  191 (374)
T ss_pred             HHHHHHHHhhCCceEEEEccCCceEEEcccccCCCc--------------------------------------------
Confidence            999999999999999999999999999999996210                                            


Q ss_pred             ccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhh
Q psy8322         267 WMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEY  346 (651)
Q Consensus       267 w~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y  346 (651)
                                     +    .+                                                          
T Consensus       192 ---------------~----~~----------------------------------------------------------  194 (374)
T cd03858         192 ---------------K----RT----------------------------------------------------------  194 (374)
T ss_pred             ---------------c----cc----------------------------------------------------------
Confidence                           0    00                                                          


Q ss_pred             ccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhhccC
Q psy8322         347 IRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYARLH  426 (651)
Q Consensus       347 ~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a~~~  426 (651)
                                                                                ....+||.+.|+.|+..|+..+
T Consensus       195 ----------------------------------------------------------~~~~~~d~~~~~~la~~~a~~~  216 (374)
T cd03858         195 ----------------------------------------------------------AYSATPDDELFRYLAKTYADAH  216 (374)
T ss_pred             ----------------------------------------------------------CCCCCCCHHHHHHHHHHHHHhC
Confidence                                                                      0013688999999999999999


Q ss_pred             CCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         427 PTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       427 ~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      +.|++...|.......|..|++++..|||++|+|+||+|..+++++||+||+||++||.++++.+|++|+++++.++.++
T Consensus       217 ~~~~~~~~~~~~~~~~y~~G~~~~~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~p~~~~i~~i~~en~~all~l~~~a  296 (374)
T cd03858         217 PTMHKGGPCCCNDDEEFPGGITNGAAWYSVTGGMQDWNYLHTNCFEITLELSCCKFPPASELPKYWEENREALLAYIEQV  296 (374)
T ss_pred             HHhcCCCCCCCcccccCCCCcEEcceeeEcCCCchhhhhhccCceEEEEeccCCCCCChhHhHHHHHHHHHHHHHHHhhc
Confidence            99988766544445678999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeC-CCceEEEEEE
Q psy8322         507 HRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPE-STSPVVGAVL  583 (651)
Q Consensus       507 ~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~-~~~~~~~~~L  583 (651)
                      +.+|+|+|+|++|+||++|+|.|.+...+++||.+|.|.+.+++|+|+|+|++.||+++++++.+.. ++...++|.|
T Consensus       297 ~~~i~G~V~d~~g~pl~~A~V~i~~~~~~~~Td~~G~f~~~l~~G~y~l~vs~~Gy~~~~~~v~v~~~g~~~~~~~~l  374 (374)
T cd03858         297 HRGIKGFVRDANGNPIANATISVEGINHDVTTAEDGDYWRLLLPGTYNVTASAPGYEPQTKSVVVPNDNSAVVVDFTL  374 (374)
T ss_pred             CCceEEEEECCCCCccCCeEEEEecceeeeEECCCceEEEecCCEeEEEEEEEcCcceEEEEEEEecCCceEEEeeEC
Confidence            9899999999999999999999999999999999999977789999999999999999999888876 6666677654

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr

>KOG2650|consensus

Probab=100.00  E-value=1.6e-61  Score=511.89  Aligned_cols=269  Identities=25%  Similarity=0.386  Sum_probs=233.5

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHH
Q psy8322          18 RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREI   97 (651)
Q Consensus        18 ~~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~   97 (651)
                      +....++|.+||+++||++||+.|+++||+++++..||+|+|||+|.+|+|+.+.  ...||+|||+|||||||||++++
T Consensus       111 ~~~~~~~~~~Y~~le~I~~~l~~l~~~~P~~v~~~~IG~s~EgR~i~~lkIs~~~--~~~k~~I~id~GiHAREWIspAt  188 (418)
T KOG2650|consen  111 RRSNDFNWERYHSLEEIYEWLDNLAERYPDLVSLIHIGRSYEGRPLKVLKISGGD--NRNKKAIFIDAGIHAREWISPAT  188 (418)
T ss_pred             cccccccHHHhcCHHHHHHHHHHHHHhCCCceEEEEcccccCCceEEEEEecCCC--CCCCceEEEecchhHHhhccHHH
Confidence            3344699999999999999999999999999999999999999999999999863  46799999999999999999999


Q ss_pred             HHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCCCC----ccCcCCCCCCCcccCCC-C
Q psy8322          98 ILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGRNN----INNHDLNRQFPDYFRHN-R  170 (651)
Q Consensus        98 ~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r~n----~~GvDLNRnf~~~w~~~-~  170 (651)
                      ++++|++|+..| +.|+.++++|++++|+|+|++|||||+|+++.+|  ||+|++..    |.||||||||+++|+.. |
T Consensus       189 a~~~i~qLv~~y-~~~~~~~~ll~~~dwyI~Pv~NPDGYeYS~t~~R~WRKnRs~~~~~~~C~GvDlNRNfd~~W~~~~G  267 (418)
T KOG2650|consen  189 ALWFINQLVSSY-GRDPAVTKLLDKLDWYILPVVNPDGYEYSRTTDRLWRKNRSPNGCASRCIGVDLNRNFDFHWGGGKG  267 (418)
T ss_pred             HHHHHHHHHhhh-ccCHHHHHHHhcCcEEEEeeecCCcceeeecccccccccCCCCCCCCeeeCCCCCCCccCcCCCCCC
Confidence            999999999999 8899999999999999999999999999999999  78887655    99999999999999983 4


Q ss_pred             -CCCCC---CCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc
Q psy8322         171 -SNIPT---LVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR  244 (651)
Q Consensus       171 -s~~p~---y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  244 (651)
                       |++||   |+|++|||||||+||.+|+.+.  ++.++|++|+|+|+++|||||++..++|..+..++.+.+.+..+.-.
T Consensus       268 as~~PCse~Y~G~~pfSEpEt~av~~fi~~~~~~i~~yislHSYsQ~llyPyg~~~~~~~~~~dl~~va~~a~~ai~~~~  347 (418)
T KOG2650|consen  268 ASSDPCSETYAGPSPFSEPETRAVRDFITSFENNIKAYISLHSYSQLLLYPYGYTNDLPEDYEDLQEVARAAADALKSVY  347 (418)
T ss_pred             CCCCCCccccCCCCCCCcHHHHHHHHHHHhcCcceEEEEEecccceeEEecccccCCCCCCHHHHHHHHHHHHHHHHHHh
Confidence             78999   9999999999999999999986  47999999999999999999998886532221222222222111112


Q ss_pred             ccCCccccccccccccchhhhcccC---CCCeEEEEEeeCceecccCCCcc
Q psy8322         245 SNIPTLVSTSQSIDPEVQAVIDWMN---SVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       245 ~~~~~~~~~~~~~~~~~g~~~dw~~---~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      ...+++++.+..+||++|+++||+.   ++|+++++||++.   +.|+|.+
T Consensus       348 gt~Y~~G~~~~~~y~asG~S~Dway~~~gi~~~ft~ELrd~---g~~GF~L  395 (418)
T KOG2650|consen  348 GTKYTVGSSADTLYPASGGSDDWAYDVLGIPYAFTFELRDT---GRYGFLL  395 (418)
T ss_pred             CCEEEeccccceeeccCCchHHHhhhccCCCEEEEEEeccC---CCCCccC
Confidence            2235667778999999999999994   7999999999987   7889998

>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3

Probab=100.00  E-value=6.6e-58  Score=472.52  Aligned_cols=257  Identities=20%  Similarity=0.298  Sum_probs=224.5

Q ss_pred             CCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322          27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV  106 (651)
Q Consensus        27 ~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~  106 (651)
                      .||+|+||.+||++|+++||+++++.+||+|+|||+|++|+|+++.  ...||.|||+||+|||||+|++++++++++|+
T Consensus         1 ~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EGR~i~~l~i~~~~--~~~k~~i~i~~giHarEwi~~~~~~~~i~~Ll   78 (300)
T cd03872           1 VYHPLEEIESWMFYMNKTHSDLVHLFSIGKSYEGRSLYVLKLGKRT--RSYKKAVWIDCGIHAREWIGPAFCQWFVKEAL   78 (300)
T ss_pred             CCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEEecCC--CCCCCeEEEecccccccccCHHHHHHHHHHHH
Confidence            4999999999999999999999999999999999999999999754  34799999999999999999999999999999


Q ss_pred             HHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CCCCC---CC
Q psy8322         107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SNIPT---LV  177 (651)
Q Consensus       107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~p~---y~  177 (651)
                      .+| +.|+.+++||++++|+|||++|||||+++++++|  ||+|.   +.+|.||||||||+++|...+ +.+||   |+
T Consensus        79 ~~~-~~d~~~~~lL~~~~~~ivP~vNPDGy~ys~~~~r~wrknR~~~~~~~c~GVDLNRNf~~~w~~~g~s~~Pcs~~Y~  157 (300)
T cd03872          79 NSY-QTDPAMKKMLNQLYFYVMPVFNVDGYHYSWTNDRFWRKTRSKNSRYQCRGVDANRNWKVKWCDEGASLHPCDDTYC  157 (300)
T ss_pred             Hhc-cCChHHHHHHhhCeEEEEeeecCCcceeeeccchhhhccCCCCCCCCccccccccccCcccCCCCCCCCCCCCCCC
Confidence            988 7799999999999999999999999999999999  66654   468999999999999998866 67899   99


Q ss_pred             CCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc---ccCCcccc
Q psy8322         178 STSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR---SNIPTLVS  252 (651)
Q Consensus       178 G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~  252 (651)
                      |+.|||||||+||++|+.++  ++.+++++|+++++++|||++++..+++   ..+++......++..+   ...+.+++
T Consensus       158 G~~pfSEpEt~al~~~~~~~~~~i~~~ls~Hsyg~~i~~P~g~~~~~~~~---~~~~~~~~~~~~~ai~~~~~~~Y~~g~  234 (300)
T cd03872         158 GPFPESEPEVKAVAQFLRKHRKHVRAYLSFHAYAQMLLYPYSYKYATIPN---FGCVESAAYNAVNALQSAYGVRYRYGP  234 (300)
T ss_pred             CCCCCCcHHHHHHHHHHHhCCccceEEEEEccCCcEEEecCCCcCCCCCC---hHHHHHHHHHHHHHHHHhhCCCCcccC
Confidence            99999999999999999987  4888999999999999999999876542   2233222222222221   23466777


Q ss_pred             ccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         253 TSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       253 ~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      .+..+|+++|++.||+  .++|+++++||++.   +.|+|++
T Consensus       235 ~~~~lY~a~G~s~Dw~y~~~i~~s~t~EL~~~---g~~gF~l  273 (300)
T cd03872         235 ASSTLYVSSGSSMDWAYKNGIPYAFAFELRDT---GYYGFLL  273 (300)
T ss_pred             cccceecCCCCHHHHhhcCCCcEEEEEEeCCC---CCCCCcC
Confidence            7888999999999999  48899999999998   7899997

4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse

>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3

Probab=100.00  E-value=2.1e-57  Score=468.86  Aligned_cols=259  Identities=19%  Similarity=0.255  Sum_probs=226.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHH
Q psy8322          25 FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEH  104 (651)
Q Consensus        25 ~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~  104 (651)
                      |++||+|+||.++|++|+++||+++++.+||+|+|||+|++|+|+++.  ...||.||++|++|||||+|+++++++|++
T Consensus         1 ~~~Y~~~~ei~~~l~~L~~~~p~~v~l~~iG~S~EgR~I~~l~i~~~~--~~~k~~i~i~~giHarEwi~~~~~l~~i~~   78 (298)
T cd06247           1 YTKYHPMDEIYNWMDQIKEKYSELVSQHYLGCTYELRPMYYLKIGWPS--DKPKKIIWMDCGIHAREWISPAFCQWFVKE   78 (298)
T ss_pred             CCCcCCHHHHHHHHHHHHHHCCCcEEEEeceECcCCceEEEEEeecCC--CCCCcEEEEeccccccccccHHHHHHHHHH
Confidence            679999999999999999999999999999999999999999999753  346899999999999999999999999999


Q ss_pred             HHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CCCCC---
Q psy8322         105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SNIPT---  175 (651)
Q Consensus       105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~p~---  175 (651)
                      |+++| ..|+.+++||++++|+|||++|||||+++++++|  ||+|.   +.+|.||||||||+++|+..+ |.+||   
T Consensus        79 Ll~~y-~~d~~~~~ll~~~~i~ivP~~NPDGy~ys~~~~r~wRknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~p~~~~  157 (298)
T cd06247          79 ILQNY-KTDPILRKVLKNVDFYVLPVLNIDGYIYTWTTDRLWRKNRSPHNNGTCYGVDLNRNFNSQWCSIGASRNCRSNI  157 (298)
T ss_pred             HHHHh-ccCHHHHHHHhcCeEEEEeeecCCcceEEecccceecccCCCCCCCCccccccccCCCCccccCCCCCCCCCCC
Confidence            99998 7789999999999999999999999999999998  67665   358999999999999999765 56888   


Q ss_pred             CCCCCCCCcHHHHHHHHHHHhCC--cEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcc---cCCcc
Q psy8322         176 LVSTSQSIDPEVQAVIDWMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS---NIPTL  250 (651)
Q Consensus       176 y~G~~~~sepEt~al~~~~~~~~--~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  250 (651)
                      |+|+.|||||||+||++++.+.+  +.+++++|+++++++|||++++.++++   ..++++....+++..++   ..+..
T Consensus       158 y~G~~pfSEpEt~ai~~~~~~~~~~i~~~l~~Hsyg~~i~~P~g~~~~~~~n---~~~~~~~a~~~~~ai~~~~~~~y~~  234 (298)
T cd06247         158 FCGTGPESEPETKAVARLIESKKSDILCYLTIHSYGQLILLPYGYTKEPSSN---HEEMMLVAQKAAAALKEKHGTEYRV  234 (298)
T ss_pred             cCCCCCCCcHHHHHHHHHHHhcCcceEEEEEeccCCCeEEeCCcCCCCCCCC---HHHHHHHHHHHHHHHHHhcCCCCcc
Confidence            99999999999999999999986  556999999999999999999877542   23444433333333322   33556


Q ss_pred             ccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         251 VSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       251 ~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      ++.+..+|+++|++.||+  .++|+++++||++.   ++|+|++
T Consensus       235 g~~~~~~y~a~G~s~Dwa~~~~~~~s~t~El~~~---g~~gF~l  275 (298)
T cd06247         235 GSSALILYSNSGSSRDWAVDIGIPFSYTFELRDN---GTYGFVL  275 (298)
T ss_pred             CCcccccccCCCChhhhhhccCCCEEEEEEeCCC---CCCCCCC
Confidence            667788999999999999  48899999999998   7999987

4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.

>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=5.2e-57  Score=467.74  Aligned_cols=260  Identities=21%  Similarity=0.302  Sum_probs=226.0

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLL  102 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~  102 (651)
                      ++|+.||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++.   ..||.|+|+||+|||||+|++++++++
T Consensus         1 ~~~~~Y~~~~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~I~~l~is~~~---~~kp~v~i~~giHarE~i~~~~~l~~~   77 (301)
T cd03870           1 FNYATYHTLDEIYDFMDLLVAEHPNLVSKLQIGRSYEGRPIYVLKFSTGG---SNRPAIWIDAGIHSREWITQATGVWFA   77 (301)
T ss_pred             CCccccCCHHHHHHHHHHHHHHCCCceEEEecccCCCCCeEEEEEEecCC---CCCceEEEeccccccchhhHHHHHHHH
Confidence            47999999999999999999999999999999999999999999999764   478999999999999999999999999


Q ss_pred             HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CCCCC-
Q psy8322         103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SNIPT-  175 (651)
Q Consensus       103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~p~-  175 (651)
                      ++|+.+| +.|+.++.+|++++|+|||++|||||+++++.+|  ||+|.   ..+|.||||||||+++|+..+ +.+|| 
T Consensus        78 ~~L~~~~-~~d~~~~~lLd~~~i~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~  156 (301)
T cd03870          78 KKITEDY-GQDPSFTAILDSMDIFLEIVTNPDGYVFTHSQNRLWRKTRSVTSGSLCVGVDPNRNWDAGFGGAGASSNPCS  156 (301)
T ss_pred             HHHHHhc-ccCHHHHHHHHhCcEEEEeeecCchhhheecccceeecCCCCCCCCCccccccccCCCcccCcCCCCCCCCc
Confidence            9999988 7789999999999999999999999999998888  66664   358999999999999998765 57899 


Q ss_pred             --CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc---ccCCc
Q psy8322         176 --LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR---SNIPT  249 (651)
Q Consensus       176 --y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~  249 (651)
                        |+|+.|||||||+||++|+.+. ++.+++++||++++++|||++++..+|+   .+++.+....++...+   ...+.
T Consensus       157 ~~Y~G~~pfSEpEt~av~~~~~~~~~~~~~l~lHS~g~~i~yP~~~~~~~~~~---~~~~~~la~~~~~ai~~~~g~~y~  233 (301)
T cd03870         157 ETYHGPYANSEVEVKSIVDFVKSHGNFKAFISIHSYSQLLLYPYGYTTQSIPD---KTELNQVAKSAVAALKSLYGTSYK  233 (301)
T ss_pred             cccCCCCCCccHHHHHHHHHHhhCCCeEEEEEeccCCceEEecCcCCCCCCCC---HHHHHHHHHHHHHHHHHhcCCccc
Confidence              9999999999999999999987 5999999999999999999999877643   2233222222222121   23355


Q ss_pred             cccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         250 LVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       250 ~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      .++.+..+|+++|++.||+  .++++++++||++.   ++|+|.+
T Consensus       234 ~g~~~~~~y~a~G~s~Dw~y~~~~~~s~t~El~~~---g~~gF~l  275 (301)
T cd03870         234 YGSIITTIYQASGGSIDWSYNQGIKYSFTFELRDT---GRYGFLL  275 (301)
T ss_pred             cccccceeecCCCChhhhhhcCCCcEEEEEEeCCC---CCCCCCC
Confidence            6666778999999999999  48899999999997   6899987

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p

>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=9.6e-57  Score=464.99  Aligned_cols=260  Identities=20%  Similarity=0.297  Sum_probs=223.5

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLL  102 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~  102 (651)
                      ++|++||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++   ...||.|||+|++|||||+|++++++++
T Consensus         1 ~~~~~Y~~~~ei~~~l~~la~~~p~~v~~~~IG~S~eGR~i~~l~i~~~---~~~kp~v~i~~giHarE~i~~~~~l~~i   77 (300)
T cd03871           1 HSYEKYNNWETIEAWTEQVASENPDLISRSQIGTTFEGRPIYLLKVGKP---GVNKPAIFMDCGFHAREWISPAFCQWFV   77 (300)
T ss_pred             CCccccCCHHHHHHHHHHHHHHCCCceEEEEeeeCCCCCeeEEEEEccC---CCCCCeEEEeccccccccccHHHHHHHH
Confidence            4699999999999999999999999999999999999999999999985   3568999999999999999999999999


Q ss_pred             HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCC---CCccCcCCCCCCCcccCCCC-CCCCC-
Q psy8322         103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGR---NNINNHDLNRQFPDYFRHNR-SNIPT-  175 (651)
Q Consensus       103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r---~n~~GvDLNRnf~~~w~~~~-s~~p~-  175 (651)
                      +.|++.| +.|+.+++||++++|+|||++|||||+++++.+|  ||+|..   .+|.|||||||||++|+..+ |.+|| 
T Consensus        78 ~~l~~~y-~~d~~~~~lL~~~~~~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~pc~  156 (300)
T cd03871          78 REAVRTY-GREAIMTELLDKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGSSCIGTDPNRNFNAGWCTVGASRNPCD  156 (300)
T ss_pred             HHHHHHc-cCCHHHHHHHHcCeEEEEEeecCCcCeeeeccCHHHHHhcCCCCCCCccccccCcCCCCccCCCCCCCCCCC
Confidence            9999998 7889999999999999999999999999999998  676653   45999999999999998765 67899 


Q ss_pred             --CCCCCCCCcHHHHHHHHHHHhCC--cEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcc---cCC
Q psy8322         176 --LVSTSQSIDPEVQAVIDWMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS---NIP  248 (651)
Q Consensus       176 --y~G~~~~sepEt~al~~~~~~~~--~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  248 (651)
                        |+|+.|||||||+||++|+.+.+  +.+++++|+++++++|||++++..+++   ..++++......+..++   ..+
T Consensus       157 ~~Y~G~~p~SEpEt~Al~~~~~~~~~~~~~~l~~HSyg~~i~~Py~~~~~~~~~---~~~~~~la~~~~~ai~~~~g~~y  233 (300)
T cd03871         157 ETYCGSAPESEKETKALADFIRNNLSSIKAYLTIHSYSQMLLYPYSYTYKLPEN---HAELNSVAKGAVKELASLYGTKY  233 (300)
T ss_pred             CCcCCCCCCCCHHHHHHHHHHHhcCcceeEEEEeccCccEEEecCcCCCCCCCC---HHHHHHHHHHHHHHHHHhhCCCC
Confidence              99999999999999999999874  688999999999999999998776542   22332222222222111   223


Q ss_pred             ccccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         249 TLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       249 ~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      .+++.+..+|+++|++.||+  .++++++++||++.   +.|+|.+
T Consensus       234 ~~g~~~~~~Y~a~G~s~Dw~y~~~~~~s~t~El~~~---g~~gf~l  276 (300)
T cd03871         234 TYGPGATTIYPAAGGSDDWAYDQGIKYSFTFELRDK---GRYGFLL  276 (300)
T ss_pred             cCCccccccccCCCCHHHHHhcCCCcEEEEEEeCCC---CCCCCCC
Confidence            45555678999999999999  48899999999987   6888887

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.

>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=1.2e-56  Score=465.22  Aligned_cols=259  Identities=22%  Similarity=0.295  Sum_probs=224.7

Q ss_pred             CCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHH
Q psy8322          25 FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEH  104 (651)
Q Consensus        25 ~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~  104 (651)
                      |++||+|+||.++|++|+++||+++++.+||+|+|||+|++|+|+++.  ...||.|||+||+|||||+|+++++++|++
T Consensus         2 ~~~Y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~egR~I~~l~is~~~--~~~k~~v~i~~giHarE~i~~~~~l~~i~~   79 (300)
T cd06246           2 YEQYHSLNEIYSWIEFITERHSDMLEKIHIGSSFEKRPLYVLKVSGKE--QTAKNAIWIDCGIHAREWISPAFCLWFVGH   79 (300)
T ss_pred             CCccCCHHHHHHHHHHHHHHCCCcEEEEecccCCCCCeEEEEEEeCCC--CCCCCeEEEecccCccchhhHHHHHHHHHH
Confidence            789999999999999999999999999999999999999999999753  356999999999999999999999999999


Q ss_pred             HHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCC---CCccCcCCCCCCCcccCCCC-CCCCC---
Q psy8322         105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGR---NNINNHDLNRQFPDYFRHNR-SNIPT---  175 (651)
Q Consensus       105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r---~n~~GvDLNRnf~~~w~~~~-s~~p~---  175 (651)
                      |++.| +.|+.++.||++++|+|||++|||||+++++++|  ||+|..   .+|.|||||||||++|...+ +.+||   
T Consensus        80 Ll~~~-~~d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~r~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~~  158 (300)
T cd06246          80 ATQFY-GIDGQMTNLLRHMDFYIMPVMNVDGYDYTWKKNRMWRKNRSFYANSHCIGTDLNRNFDAKWCCEGASSSSCSET  158 (300)
T ss_pred             HHHHh-cCCHHHHHHHHhCeEEEEEeecCCceeEEEeccceeecCCCCCCCCCccCcccccccccccCCCCCCCCCCCCC
Confidence            99988 7889999999999999999999999999999988  677653   57999999999999998766 57898   


Q ss_pred             CCCCCCCCcHHHHHHHHHHHhCC--cEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc---ccCCcc
Q psy8322         176 LVSTSQSIDPEVQAVIDWMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR---SNIPTL  250 (651)
Q Consensus       176 y~G~~~~sepEt~al~~~~~~~~--~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~  250 (651)
                      |+|+.|||||||+||.+|+.+++  +.++|++|+++++++|||++++..+++   ..++++....+++..+   ...+.+
T Consensus       159 y~G~~p~SEpEt~av~~~~~~~~~~i~~~is~Hs~g~~i~~P~~~~~~~~~~---~~~~~~la~~~~~ai~~~~~~~y~~  235 (300)
T cd06246         159 YCGPYPESEPEVKAVASFLRRHINQIKAYISMHSYSQMILFPYSYTRSKSKD---HEELSLLAKEAVRAIRRTSNNRYTH  235 (300)
T ss_pred             cCCCCCCccHHHHHHHHHHHhCCcceeEEEEeccCCcEEEeccccCCCCCCC---HHHHHHHHHHHHHHHHHhhCCCCee
Confidence            99999999999999999999885  778999999999999999999776542   2333332222222221   233555


Q ss_pred             ccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         251 VSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       251 ~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      ++.+..+|+++|++.||+  .++++++++|+++.   +.|+|.+
T Consensus       236 g~~~~~~Y~a~G~s~Dw~y~~~~~~s~t~El~~~---g~~gF~l  276 (300)
T cd06246         236 GSGAETIYLAPGGSDDWAYDLGIKYSFTFELRDT---GTYGFLL  276 (300)
T ss_pred             cCCCCeeeccCCChhhHhhcCCCCEEEEEEecCC---CCCCCCC
Confidence            556778999999999999  48899999999998   7899887

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil

>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=1e-54  Score=452.77  Aligned_cols=193  Identities=32%  Similarity=0.460  Sum_probs=178.8

Q ss_pred             CCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHH
Q psy8322          26 GNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHL  105 (651)
Q Consensus        26 ~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L  105 (651)
                      ..||+|+||.++|++|+++||+++++++||+|+|||+|++++|++++.....||.|+|+|++||+||+|++++++|++.|
T Consensus         2 ~~y~~y~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~~~~~~kp~i~i~~~iH~~E~~g~~~~l~~i~~L   81 (295)
T cd03859           2 RGYHNYLEMVDELNAAAAAYPNLTKVKSIGKSYEGRDIIAVKISDNVATDENKPEVLYTSTHHAREWLSLEMAIYLMHYL   81 (295)
T ss_pred             CCCCCHHHHHHHHHHHHHHCCCceEEEeeeecCCCCeEEEEEEecCCCCCCCCCEEEEECCcCccchhhHHHHHHHHHHH
Confidence            47999999999999999999999999999999999999999999876445679999999999999999999999999999


Q ss_pred             HHHhccCChhHHHhhcCceEEEEeccCccccccccc--ccc--cCCCCC-----CCccCcCCCCCCCcccCCC---CCCC
Q psy8322         106 VVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE--GNC--RSGRGR-----NNINNHDLNRQFPDYFRHN---RSNI  173 (651)
Q Consensus       106 ~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~--~~r--~~~~~r-----~n~~GvDLNRnf~~~w~~~---~s~~  173 (651)
                      ++++ ..|+.++.+|++++|+|||++|||||+++++  .+|  ||+|.+     .||.|||||||||++|...   .|.+
T Consensus        82 ~~~~-~~d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~~~wrkn~~~~~~~~~~~~GvDLNRNf~~~w~~~~~g~s~~  160 (295)
T cd03859          82 LENY-GKDPRIQNLVDNRELWFVPVVNPDGYEYDETTGGYRSWRKNRRDNSGDISSSDGVDLNRNYGYKWGYDSGGSSND  160 (295)
T ss_pred             HHhh-ccCHHHHHHHhcCeEEEEeeeCCCcceEEeeccCccceeccCCCCCCCcCcceeecCCCCCCcccCCCCCCCCCC
Confidence            9988 6689999999999999999999999999987  555  666654     5899999999999999873   3678


Q ss_pred             CC---CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccc
Q psy8322         174 PT---LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSF  219 (651)
Q Consensus       174 p~---y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~  219 (651)
                      ||   |+|+.|||||||+||++++.++ ++.+++++|+++++++|||+++
T Consensus       161 p~~~~y~G~~p~sepEt~av~~~~~~~~~~~~~l~~Hs~g~~i~~P~~~~  210 (295)
T cd03859         161 PSSETYRGPSAFSEPETQAIRDFVESHKNIKTALNYHTYSNLWLYPYGYQ  210 (295)
T ss_pred             CCCCCccCCCCCchHHHHHHHHHHHhCCCeEEEEEeecCCceEEeCCcCC
Confidence            98   9999999999999999999999 8999999999999999999986

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.

>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E

Probab=100.00  E-value=8.8e-55  Score=453.56  Aligned_cols=262  Identities=23%  Similarity=0.359  Sum_probs=224.1

Q ss_pred             CCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHH
Q psy8322          25 FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEH  104 (651)
Q Consensus        25 ~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~  104 (651)
                      |++||+|+||.++|++|+++||+++++.+||+|+|||+|++|+|+++......||.|+++|++||+||+|++++++++++
T Consensus         1 ~~~Y~~~~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~I~~~~~~~~~k~~v~i~~giHarE~~~~~~~l~~~~~   80 (304)
T cd06248           1 FDSYHPLEDHLQWLRDLQAAFPNNSELFTIGKSYEGRTILGLHIWGSGGEKGSKPAIVIHGTVHAREWISTMTVEYLAYQ   80 (304)
T ss_pred             CCccCCHHHHHHHHHHHHHHCCCceEEeceEECCCCCeEEEEEEecCCCCCCCCcEEEEECCcCcCccccHHHHHHHHHH
Confidence            67899999999999999999999999999999999999999999976533457899999999999999999999999999


Q ss_pred             HHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCC---CCccCcCCCCCCCcccCCCC-CCCCC---
Q psy8322         105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGR---NNINNHDLNRQFPDYFRHNR-SNIPT---  175 (651)
Q Consensus       105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r---~n~~GvDLNRnf~~~w~~~~-s~~p~---  175 (651)
                      |+++| ..|+.++.||++++|+|||++|||||+++++++|  ||+|..   .+|.|||||||||++|...+ +.+||   
T Consensus        81 L~~~~-~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~s~~  159 (304)
T cd06248          81 LLTGY-GSDATVTALLDKFDFYIIPVVNPDGFVYTQTSDRLWRKNRQPTSGSSCVGTDLNRNWPYKWDGGGSSTNPCSET  159 (304)
T ss_pred             HHHhh-ccCHHHHHHHHhCcEEEEeeecCchhhhhccchhhhhhcCCCCCCCCceeecCCCCCCCcccCCCCCCCCCCCC
Confidence            99988 6789999999999999999999999999999888  666542   47999999999999999865 57898   


Q ss_pred             CCCCCCCCcHHHHHHHHHHHhC----CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc---ccCC
Q psy8322         176 LVSTSQSIDPEVQAVIDWMNSV----PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR---SNIP  248 (651)
Q Consensus       176 y~G~~~~sepEt~al~~~~~~~----~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  248 (651)
                      |+|+.|||||||+||++|+.++    ++.+++|+|+++++++|||++++...++  +..++......+++..+   ...+
T Consensus       160 Y~G~~~~sEpEt~av~~~~~~~~~~~~~~~~l~~Hs~~~~i~~P~~~~~~~~~~--d~~~~~~la~~~a~ai~~~~g~~y  237 (304)
T cd06248         160 YRGESPGDAPEAKALAAFLNKLAEGQGIVGYIDWHSYSQLILYPYGYSCDAVPP--NLENLEELAAGLAKAIRAVSGTTY  237 (304)
T ss_pred             cCCCCCCccHHHHHHHHHHHhccccCceEEEEEeccCcceEEecCcCCCCCCCC--CHHHHHHHHHHHHHHHHHhcCCCC
Confidence            9999999999999999999987    4999999999999999999998755321  12233333222222221   1235


Q ss_pred             ccccccccccccchhhhcccC---CCCeEEEEEeeCceecccCCCcc
Q psy8322         249 TLVSTSQSIDPEVQAVIDWMN---SVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       249 ~~~~~~~~~~~~~g~~~dw~~---~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      +.++.+..+|+++|++.||+.   ++++++++|+++.   +.|+|++
T Consensus       238 ~~g~~~~~~y~~~G~~~D~~y~~~gi~~~~t~El~~~---~~~gf~~  281 (304)
T cd06248         238 TVGPACNTLYQTTGSSVDWVYHVAGAAWSYQLELRDT---GTYGFVL  281 (304)
T ss_pred             cccccccccccCCCCcchhhhccCCCcEEEEEEeCCC---CCCCCCC
Confidence            566667889999999999994   6689999999997   6888887

Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,

>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins

Probab=100.00  E-value=7.6e-51  Score=419.20  Aligned_cols=176  Identities=26%  Similarity=0.419  Sum_probs=158.3

Q ss_pred             cCCcEEEEEecccc------CCceEEEEEEcCCCC--CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhH
Q psy8322          45 YANMTELYSIGKSV------LGKDLLVVNISTAPV--HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNI  116 (651)
Q Consensus        45 ~p~~~~~~~iG~S~------egr~i~~v~i~~~~~--~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~  116 (651)
                      ||+++++++||+|+      |||+|++|+|+++..  ....||.|+|+|++|||||+|++++++|++.|+++| ..|+++
T Consensus         1 ~p~~~~~~~iG~S~~~~~~~eGR~I~~l~ig~~~~~~~~~~kp~v~i~~~iHarE~ig~~~~l~~i~~L~~~~-~~d~~v   79 (293)
T cd06226           1 YPNLAQWVDIGDSWDKPGGPAGYDIRALKLTNKATNSPTGPKPVFFIMGAIHAREYTTAELVLRFAEDLLEGY-GTDADA   79 (293)
T ss_pred             CCcceEEEEeeEecccCcccCCceEEEEEEecCCCCcCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHHhc-ccCHHH
Confidence            79999999999999      999999999998653  356899999999999999999999999999999988 778999


Q ss_pred             HHhhcCceEEEEeccCcccccccccccc-cCCCC-------CCCccCcCCCCCCCcccCCCCC--CCCC---CCCCCCCC
Q psy8322         117 RFLLDNTRIHLLPNLNPDGSELAVEGNC-RSGRG-------RNNINNHDLNRQFPDYFRHNRS--NIPT---LVSTSQSI  183 (651)
Q Consensus       117 ~~ll~~~~~~iiP~~NPDG~~~~~~~~r-~~~~~-------r~n~~GvDLNRnf~~~w~~~~s--~~p~---y~G~~~~s  183 (651)
                      +.||++++|+|||++|||||++++++.. ||++.       +.||.|||||||||++|...+.  .+||   |+|+.|||
T Consensus        80 ~~lL~~~~i~ivP~~NPDG~~~~~~~~~wRkNr~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~~~~p~~~~y~G~~p~S  159 (293)
T cd06226          80 TWLLDYHEIHVVPIVNPDGRKIAEQGLSQRKNANTSGGSNCSGSSYGVDLNRNYSFGWGGAGASSGDPCSETYRGPAPGS  159 (293)
T ss_pred             HHHHhcCeEEEEecccCCcceeeccCcceeccCCCCCCCCccccccccccccCCCCcCCcCCCCCCCCCCCCcCCCCCCC
Confidence            9999999999999999999999876322 66653       4567999999999999987653  6898   99999999


Q ss_pred             cHHHHHHHHHHHhCC----------------cEEEEEEecCceeeeeccccccC
Q psy8322         184 DPEVQAVIDWMNSVP----------------FVMSLQLHGGNVVASYPYDSFYG  221 (651)
Q Consensus       184 epEt~al~~~~~~~~----------------~~~~i~~H~~~~~~~~P~~~~~~  221 (651)
                      ||||+||++|+.+++                +.++|++|+++++++|||+++..
T Consensus       160 EpEt~Av~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~HS~g~~i~~P~g~~~~  213 (293)
T cd06226         160 EPETAALEDYIRGLFPDQRGPGDTDPAPDDTTGVYLDIHSYSNLVLYPWGWTTQ  213 (293)
T ss_pred             cHHHHHHHHHHHhccccccccccccccccccceEEEEeccCCCeEeecCcCCCC
Confidence            999999999999975                78899999999999999999743

This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.

>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=1.4e-49  Score=406.07  Aligned_cols=248  Identities=21%  Similarity=0.259  Sum_probs=212.1

Q ss_pred             CCC-HHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322          28 YHN-YDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV  106 (651)
Q Consensus        28 y~~-~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~  106 (651)
                      ||+ ++||.++|++|+++||+ +++.+||+|+|||+|++|+|+........||.|+|+||+|||||+|++++++|++.|+
T Consensus         2 Yh~~~~ei~~~l~~l~~~~p~-~~~~~ig~S~egr~i~~i~~~~~~~~~~~k~~i~i~agiHarE~i~~~~~l~li~~L~   80 (272)
T cd06227           2 YHTATDEINEEADALVKNIRL-SRLGELIESVKVRNFSSITLNPNGDPSKKKVKALLLFGEHARELISPETGLHLLSNLC   80 (272)
T ss_pred             ccCCHHHHHHHHHHHHHHCCC-cEEeeeeeccCCceeeEEEecCCCCCCCCCCEEEEECCccCCchhhHHHHHHHHHHHH
Confidence            899 99999999999999999 8899999999999999999997542114699999999999999999999999999999


Q ss_pred             HHhccC---ChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCC--CCCCCCCCC
Q psy8322         107 VEYIRG---DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSN--IPTLVSTSQ  181 (651)
Q Consensus       107 ~~~~~~---d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~--~p~y~G~~~  181 (651)
                      .++...   ++.++.+|++++|+|||++|||||+++++++|.   +|.|++|||||||||++|...+..  ...|+|+.|
T Consensus        81 ~~~~~~~~~~~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~---wR~N~~GVDLNRNf~~~w~~~~~~~~~~~y~G~~~  157 (272)
T cd06227          81 GELAETFDWGDLLKNILDNFDLKIIPNENPDGRKKVESGNYC---LRENENGVDLNRNYGADWGFKEDDYEDEEYSGPAP  157 (272)
T ss_pred             HhcccccchhHHHHHHHhcCcEEEEeccCCchheeEeccCcc---cccCCccccccccCCcccccCCCCccccccCCCCC
Confidence            987211   378999999999999999999999999888763   488889999999999999876542  223999999


Q ss_pred             CCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccc-ccc
Q psy8322         182 SIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSI-DPE  260 (651)
Q Consensus       182 ~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~  260 (651)
                      ||||||+||++++.++++.+++++|+++++++|||++++..++  .+..++++.+...+.. ....+++++.+..+ |++
T Consensus       158 ~sEpEt~av~~~~~~~~~~~~i~~Hs~~~~i~~P~~~~~~~~~--~~~~~~~~~~~~~~~~-~~~~y~~G~~~~~~~Y~a  234 (272)
T cd06227         158 FSEPETRVLRDLLTSFSPDVFLSVHSGTLALFTPYAYKKEQPE--PNLAEDMRILLLISNK-HCPRCQVGSAGKLVGYLA  234 (272)
T ss_pred             CCcHHHHHHHHHHHhCCCeEEEEeccCCCEEEecCCCCCCCCC--CCHHHHHHHHHHHHHH-hCCCCceecCccceeecC
Confidence            9999999999999999999999999999999999999977651  1234556655555442 22346666666666 999


Q ss_pred             chhhhcccC---CCCeEEEEEeeCc
Q psy8322         261 VQAVIDWMN---SVPFVMSLQLHGG  282 (651)
Q Consensus       261 ~g~~~dw~~---~~p~~~t~el~g~  282 (651)
                      +|++.||+.   ++|+++++||+|.
T Consensus       235 ~G~s~Dway~~~gip~s~t~EL~~~  259 (272)
T cd06227         235 HGTSMDYMYDVLKVPYSFTFEIYGD  259 (272)
T ss_pred             CCCHHHHHhhcCCCcEEEEEEccCC
Confidence            999999994   8899999999976

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily

Probab=100.00  E-value=6e-49  Score=409.83  Aligned_cols=253  Identities=26%  Similarity=0.378  Sum_probs=214.4

Q ss_pred             CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHH
Q psy8322          28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVV  107 (651)
Q Consensus        28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~  107 (651)
                      ||||+||.++|++|+++||+++++.+||+|.|||+|++++|++++  ...||.|+|+|++||+||+|+++++++++.|+.
T Consensus         1 Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~~--~~~k~~v~i~~~~Hg~E~~g~~~~~~~~~~L~~   78 (294)
T cd03860           1 YHTYDEIYAWLDELAQKYPDLVTVETIGRSYEGRPIKGVKISNGG--RSNKPAIFIDAGIHAREWISPATALYIINQLVE   78 (294)
T ss_pred             CCCHHHHHHHHHHHHHHCCCceEEEeeeeCCCCCeEEEEEEecCC--CCCCcEEEEECCcCcCccccHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999864  357899999999999999999999999999998


Q ss_pred             HhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCC---CCccCcCCCCCCCcccCCCC-CCCCC---CCC
Q psy8322         108 EYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGR---NNINNHDLNRQFPDYFRHNR-SNIPT---LVS  178 (651)
Q Consensus       108 ~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r---~n~~GvDLNRnf~~~w~~~~-s~~p~---y~G  178 (651)
                      ++   ++.++.||++++|+|||++||||++++++++|  ||+|.+   .+|.|||||||||+.|...+ +.+||   |+|
T Consensus        79 ~~---~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~wrknr~~~~~~~~~GvDLNRnf~~~w~~~~~~~~p~~~~y~G  155 (294)
T cd03860          79 SY---DPEVTDLLDNYDWYILPVANPDGYEYTHTTDRLWRKNRSPNSGGGCVGVDLNRNFDYHWGGGGASSDPCSETYAG  155 (294)
T ss_pred             cc---CHHHHHHHHcCeEEEEeeecCCchhhhccccchhcccCCCCCCCCceeeccCCCCCCCCccCCCCCCCCCCCccC
Confidence            64   47899999999999999999999999988887  565553   57999999999999998765 56888   999


Q ss_pred             CCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc----ccCCcccc
Q psy8322         179 TSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR----SNIPTLVS  252 (651)
Q Consensus       179 ~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~  252 (651)
                      +.|+|||||+||++++.++  ++.+++|+|+++.+++|||++....++    +.+..+.+...+....    ...+..+.
T Consensus       156 ~~~~sepEt~al~~~~~~~~~~~~~~ld~Hs~~~~i~~P~~~~~~~~~----d~~~~~~la~~~~~~~~~~~g~~Y~~g~  231 (294)
T cd03860         156 PSAFSEPETRAVRDFLLSLRGRIKAYLSLHSYGQLILYPWGYTSELPP----NYEDLREVAKAAADAIRAVYGTRYTVGS  231 (294)
T ss_pred             CCCCchHHHHHHHHHHHhccccEEEEEEeccCCceEEcCCCCCCCCCC----CHHHHHHHHHHHHHHHHHhcCCCCcccc
Confidence            9999999999999999999  799999999999999999999854443    2222223222222111    12344555


Q ss_pred             ccccccccchhhhcccC---CCCeEEEEEeeCceecccCCCcc
Q psy8322         253 TSQSIDPEVQAVIDWMN---SVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       253 ~~~~~~~~~g~~~dw~~---~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      .+..+||+.|++.||+.   ++|+.+++|+++.   +.++|.+
T Consensus       232 ~~~~~y~~~G~~~Dw~y~~~~~~~~~t~El~~~---~~~gf~~  271 (294)
T cd03860         232 SAETLYPASGGSDDWAYGVAGIPYSYTLELRDT---GRYGFLL  271 (294)
T ss_pred             ccCccccCCCchhhhhhccCCCcEEEEEEecCC---CCCCCcC
Confidence            56788999999999994   5789999999987   4677775

CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the

>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=3.5e-48  Score=408.80  Aligned_cols=252  Identities=24%  Similarity=0.375  Sum_probs=202.0

Q ss_pred             CCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHH
Q psy8322          25 FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLE  103 (651)
Q Consensus        25 ~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~  103 (651)
                      |++||+|+||.++|++|+++||+++++.+||+|+|||+|++|+|+++. .....||.|||+|+||||||+|+++++++++
T Consensus         1 ~~~Y~ty~ei~~~L~~La~~~P~lv~l~~IG~S~EGR~I~~l~Is~~~~~~~~~Kp~I~i~~giHarEwig~~~~l~li~   80 (360)
T cd06905           1 FSRYYRYDELTAALQAWASAYPQLCSLESIGKSYEGRDIWLLTLTNQATGPDREKPAFWIDANIHATEVTGSAVALYVIQ   80 (360)
T ss_pred             CCCCCCHHHHHHHHHHHHHHCCCceEEEEeeecCCCCceEEEEecCCCCCCCCCCcEEEEecCCCCCchHHHHHHHHHHH
Confidence            678999999999999999999999999999999999999999999764 2345799999999999999999999999999


Q ss_pred             HHHHHhccCChhHHHhhcCceEEEEeccCccccccccc-ccc--cCCCCC------------------C-----------
Q psy8322         104 HLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE-GNC--RSGRGR------------------N-----------  151 (651)
Q Consensus       104 ~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~-~~r--~~~~~r------------------~-----------  151 (651)
                      +|+++| +.++++++||++++|+|||++|||||+++++ ++|  ||+|..                  .           
T Consensus        81 ~Ll~~y-~~d~~i~~lLd~~~~~IvP~vNPDG~e~~~~~~~r~wRk~r~~~~~~~~~~g~~~~D~n~D~~~~~mr~~d~~  159 (360)
T cd06905          81 TLLNGY-GSDPEVTRLLDGYTFYILPRLNPDGAEQALTHPPYVRRSSRRPYPYPDRIDGLYPEDIDGDGLILQMRVKDPC  159 (360)
T ss_pred             HHHHhc-cCCHHHHHHHhcCeEEEEeeeCCChheEEeeccccccccCCCCcccccccccccccccCccchhheeeccccc
Confidence            999988 6789999999999999999999999999998 666  443321                  0           


Q ss_pred             ----------------------------------------------CccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcH
Q psy8322         152 ----------------------------------------------NINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDP  185 (651)
Q Consensus       152 ----------------------------------------------n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sep  185 (651)
                                                                    .|.|||||||||++|...+  ...|+|+.|||||
T Consensus       160 g~w~~~~~~p~~m~~~~~~~~~g~~y~~~~eg~~~~~dg~~~~~~~~~~GvDlNRNf~~~W~~~~--~~~y~G~~p~SEp  237 (360)
T cd06905         160 GAWKVSERDPRIMVRREPDEFGGTYYRLLPEGLIRNYDGYNIKIAPPLEGLDFNRNFPHDWRPEG--EQYGAGPFPFSEP  237 (360)
T ss_pred             cccccccccchhhccccccccCceeeeecccccccccccccccccccccCCCcccCcCCCCCCCC--CcCCCCCCCCChH
Confidence                                                          1269999999999997643  2358999999999


Q ss_pred             HHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcc----cCCcccccccccccc
Q psy8322         186 EVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS----NIPTLVSTSQSIDPE  260 (651)
Q Consensus       186 Et~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~  260 (651)
                      ||+||++|+.++ ++.++|++|++++++||||++++.... +.++......+.+.+.....    ..++.+ .....+++
T Consensus       238 Et~av~~~~~~~~~i~~~is~Hsyg~~il~P~g~~~~~~~-~~~~~~~~~~la~~~~~~~~y~~~~~~~~~-~~~~~~~~  315 (360)
T cd06905         238 ETRAVVEFWTDHPNINGFISYHTYSGVILRPYSDKPDDQM-PVDDLELYKALGEKGEELTGYPTVSVYHEF-RYHPKEVT  315 (360)
T ss_pred             HHHHHHHHHhcCCCeEEEEEecCCcCeeeeCCCCCcCcCC-ChhhHHHHHHHHHHHHHhcCccccccccce-ecCCcccc
Confidence            999999999987 489999999999999999999876432 12222222222222211100    000111 01223489


Q ss_pred             chhhhcccC---CCCeEEEEEeeCc
Q psy8322         261 VQAVIDWMN---SVPFVMSLQLHGG  282 (651)
Q Consensus       261 ~g~~~dw~~---~~p~~~t~el~g~  282 (651)
                      +|++.||+.   ++ +++++||++.
T Consensus       316 ~G~~~Dw~y~~~gi-~s~t~EL~~~  339 (360)
T cd06905         316 YGAFDDWAYDHLGI-FAFTVELWDL  339 (360)
T ss_pred             cCChhhhhhhcCCe-EEEEEEcCCC
Confidence            999999994   77 9999999997

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>smart00631 Zn_pept Zn_pept

Probab=100.00  E-value=3.3e-47  Score=393.84  Aligned_cols=248  Identities=31%  Similarity=0.473  Sum_probs=210.2

Q ss_pred             CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHH
Q psy8322          28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVV  107 (651)
Q Consensus        28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~  107 (651)
                      ||||+||.++|++|+++||+++++.+||+|.+||+|++++|++++  ...||.|+|+|++||+||+|++++++|++.|+.
T Consensus         1 y~ty~e~~~~l~~l~~~~~~~v~~~~iG~S~~Gr~i~~~~i~~~~--~~~k~~v~i~a~~Hg~E~~g~~~~~~~i~~L~~   78 (277)
T smart00631        1 YHSYEEIEAWLKELAARYPDLVRLVSIGKSVEGRPIWVLKISDGG--SHNKPAIFIDAGIHAREWIGPATALYLINQLLE   78 (277)
T ss_pred             CCCHHHHHHHHHHHHHHCCCceEEEeceecCCCCceEEEEEeCCC--CCCCcEEEEECCccccccccHHHHHHHHHHHHH
Confidence            899999999999999999999999999999999999999999864  346899999999999999999999999999999


Q ss_pred             HhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCC---CccCcCCCCCCCcccCCCCCCCCC---CCCCCC
Q psy8322         108 EYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRN---NINNHDLNRQFPDYFRHNRSNIPT---LVSTSQ  181 (651)
Q Consensus       108 ~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~---n~~GvDLNRnf~~~w~~~~s~~p~---y~G~~~  181 (651)
                      ++ +.++.++.+|++++|+|||++||||+++.++++|.+.++|.   ||+|||||||||..|..  +.+||   |+|+.|
T Consensus        79 ~~-~~~~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wr~~r~~~~~~~GvDLNRnf~~~w~~--~~~p~~~~y~G~~~  155 (277)
T smart00631       79 NY-GRDPRITKLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPNSNCRGVDLNRNFPFHWGK--TGNPCSETYAGPSP  155 (277)
T ss_pred             hc-ccCHHHHHHHHcCcEEEEEeecCchhhheecccccccCCCCCCCCCcCcccCCCCCCCCCC--CCCCCCCCcCCCCC
Confidence            88 56899999999999999999999999999988884434444   89999999999999988  67787   999999


Q ss_pred             CCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhccc---CCccccccccc
Q psy8322         182 SIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSN---IPTLVSTSQSI  257 (651)
Q Consensus       182 ~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~  257 (651)
                      ||||||+||++++.++ ++.+++|+|+++.+++|||++.....+++.  ..+...+..+++...+.   .+..+..+..+
T Consensus       156 ~sepEt~ai~~~~~~~~~~~~~id~Hs~~~~i~~p~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~g~~y~~g~~~~~~  233 (277)
T smart00631      156 FSEPETKAVRDFIRSNRRFVLYIDLHSYSQLILYPYGYTKNDLPPNV--DDLDAVAKALAKALASVHGTRYTYGISNGAI  233 (277)
T ss_pred             CCcHHHHHHHHHHHhcCCeeEEEEeccCCcEEEecCcCCCCCCCCCH--HHHHHHHHHHHHHHHHhcCCccccccccCcc
Confidence            9999999999999999 899999999999999999999876432211  11222222222222211   23445556667


Q ss_pred             cccchhhhcccC---CCCeEEEEEeeCc
Q psy8322         258 DPEVQAVIDWMN---SVPFVMSLQLHGG  282 (651)
Q Consensus       258 ~~~~g~~~dw~~---~~p~~~t~el~g~  282 (651)
                      |++.|++.||+.   ++++++++|+.+.
T Consensus       234 y~~~G~~~D~~~~~~gi~~~~t~El~~~  261 (277)
T smart00631      234 YPASGGSDDWAYGTLGIPFSFTLELRDD  261 (277)
T ss_pred             cCCCCchhhhhhccCCCcEEEEEEecCC
Confidence            999999999994   6789999999987

>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=1.3e-47  Score=397.37  Aligned_cols=235  Identities=19%  Similarity=0.221  Sum_probs=189.2

Q ss_pred             eccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhcc-----------CChhHHHhhcC
Q psy8322          54 IGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIR-----------GDSNIRFLLDN  122 (651)
Q Consensus        54 iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~-----------~d~~~~~ll~~  122 (651)
                      -++|+|||+|++|+|+.+.  ...||.|||+|++|||||++++++++||++||..|..           .|++++.||+ 
T Consensus         6 ~~~S~EgR~I~~l~I~~~~--~~~kp~V~i~ggiHAREwis~~~~l~~i~~Ll~~y~~~~~~~yg~~~~~d~~v~~lL~-   82 (332)
T cd06228           6 PHKTYEGRTPHGAKIGAGT--LTSRYGALFIGGVHARERGSPDNLIYFVSDLLNARKAGRGIKYGGRTYTAADVKAILD-   82 (332)
T ss_pred             CCCCCCCCeeEEEEEeCCC--CCCCCEEEEEccccccchhhHHHHHHHHHHHHHhhhccccccccccccccHHHHHHHh-
Confidence            4789999999999999853  3569999999999999999999999999999998731           4788999999 


Q ss_pred             ceEEEEeccCcccccccccccc--cCCCCC------CCccCcCCCCCCCcccCC-----------CCCCCCC---CCCCC
Q psy8322         123 TRIHLLPNLNPDGSELAVEGNC--RSGRGR------NNINNHDLNRQFPDYFRH-----------NRSNIPT---LVSTS  180 (651)
Q Consensus       123 ~~~~iiP~~NPDG~~~~~~~~r--~~~~~r------~n~~GvDLNRnf~~~w~~-----------~~s~~p~---y~G~~  180 (651)
                      ++|+|||++|||||+++++.+|  ||+|.+      .+|.||||||||+++|+.           +.|.+||   |+|+.
T Consensus        83 ~~i~IvP~vNPDGy~~s~~~~r~WRKNr~~~~~~~~~~c~GVDLNRNf~~~W~~~~~~~~~~~~~g~S~~Pcse~Y~G~~  162 (332)
T cd06228          83 AGIVVFPLVNPDGRAHDQTANSCWRKNRNPASAGPNPSSVGVDINRNFDFLWDFQKYFDPGASRSVASTDPASETFHGTA  162 (332)
T ss_pred             CeEEEEEeecCcchhheeccchhhhccCCCCcccccCcccccccCCCCCCCcCcccccccccccCCCCCCCCccccCCCC
Confidence            9999999999999999999888  676653      279999999999999973           2367999   99999


Q ss_pred             CCCcHHHHHHHHHHHhCC-cEEEEEEecCceeeeeccccccCCCCC----------------------------CCCc-h
Q psy8322         181 QSIDPEVQAVIDWMNSVP-FVMSLQLHGGNVVASYPYDSFYGESKN----------------------------NINN-H  230 (651)
Q Consensus       181 ~~sepEt~al~~~~~~~~-~~~~i~~H~~~~~~~~P~~~~~~~~~~----------------------------~~~~-~  230 (651)
                      |||||||+||++++++.+ +.++|++|+++++++|||+|++..+.+                            ...+ +
T Consensus       163 pfSEPET~av~~~~~~~~~~~~yls~HSygq~il~P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  242 (332)
T cd06228         163 AFSEPETRNVVWVMDTFKNIRWFVDLHSYGGDVLYSWGDDENQSTNPAMNFMNPAYDGKRGIVAAPDTRYGEYIDSDDWD  242 (332)
T ss_pred             CCccHHHHHHHHHHhccCCeEEEEEeccCCceEEecccCCccccccccccccccccccccccccccccccccccCCCCHH
Confidence            999999999999999986 999999999999999999999753210                            0112 2


Q ss_pred             hhhhhhhHHHHhhc---ccCCccccccccccccchhhhcccC---------CCCeEEEEEeeCceecccCCCcc
Q psy8322         231 DLNRQFPDYFRHNR---SNIPTLVSTSQSIDPEVQAVIDWMN---------SVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       231 ~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~g~~~dw~~---------~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      ++++....++....   ...+.+++ +..+||++|+++||+.         +.++++++||++..--+.|+|.+
T Consensus       243 ~l~~~a~~~~~ai~~~~g~~Y~~g~-~~~lY~~sG~s~D~ay~~~~~~~~~~~~~s~t~El~~~~~~~~~gF~~  315 (332)
T cd06228         243 AAVNLAARMGLAMAAARGRIYTVSQ-SVGLYPTSGASDDYAFSRHFADAVKRKVFSYTIEFGETNSEAECPFYP  315 (332)
T ss_pred             HHHHHHHHHHHHHHHHhCCCceeCC-cccccCCCCChhhhhhhccccccccCceEEEEEEeCCCCCCCCcCCCC
Confidence            33333333322222   12344544 4459999999999995         46899999999862113678887

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification

Probab=100.00  E-value=1.4e-46  Score=390.73  Aligned_cols=185  Identities=32%  Similarity=0.530  Sum_probs=162.9

Q ss_pred             HHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccC
Q psy8322          34 MREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRG  112 (651)
Q Consensus        34 i~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~  112 (651)
                      |.++|++|+++||+++++.+||+|.+||+|++++|+++. .....||.|+|+|++||+||+|++++++|++.|+.+|  .
T Consensus         1 i~~~l~~l~~~~p~~v~~~~iG~S~~Gr~i~~~~i~~~~~~~~~~k~~v~i~~~~Hg~E~~g~~~~l~~~~~L~~~~--~   78 (279)
T PF00246_consen    1 INAYLDALAARYPDIVRLESIGKSYEGRPIYALTIGSNSNGSDPGKPTVLIIAGIHGNEWIGSEALLYLIEELLSGY--D   78 (279)
T ss_dssp             HHHHHHHHHHHSTTTEEEEEEEE-TTS-EEEEEEESSSTTTTSTTSEEEEEEE-SSTT-THHHHHHHHHHHHHHHHT--T
T ss_pred             CHHHHHHHHHHCCCcEEEEEeeECCCCCeEEEEEeecccccccccccceEEEecccccccCchHHHHHHHHHhhccc--c
Confidence            689999999999999999999999999999999999863 3456899999999999999999999999999999865  7


Q ss_pred             ChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCC-CCCCC---CCCCCCCCcHHHH
Q psy8322         113 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNR-SNIPT---LVSTSQSIDPEVQ  188 (651)
Q Consensus       113 d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~-s~~p~---y~G~~~~sepEt~  188 (651)
                      ++.++.||++++|+|||++||||+++.+.++|.|..+|.|+.||||||||+..|...+ +..||   |+|+.|+||||++
T Consensus        79 ~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~w~~~R~n~~GvDlNRnf~~~w~~~~~~~~~~~~~y~g~~~~sepEt~  158 (279)
T PF00246_consen   79 DPEVKELLDNVVIYIIPMVNPDGYEYGTSGDRGWRKNRSNANGVDLNRNFPYQWNEEGSSSNPCSETYRGPAPFSEPETR  158 (279)
T ss_dssp             SHHHHHHHHHEEEEEES-SSHHHHHHHHHT-TTCCSTSSBTTS--GGGSSSSSTTSSSSBSSTTSTTB--SSTTTSHHHH
T ss_pred             chhhhhhcccceEEEEeeecccceeeeeecccccccccccccccccccccCcccccccccCCCCCcccCCCcchhhhHHH
Confidence            8999999999999999999999999999988877778999999999999999997764 56777   9999999999999


Q ss_pred             HHHHHHHhCCcEEEEEEecCceeeeecccccc
Q psy8322         189 AVIDWMNSVPFVMSLQLHGGNVVASYPYDSFY  220 (651)
Q Consensus       189 al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~  220 (651)
                      ||++++++.++.+++|+|+++..++|||+++.
T Consensus       159 al~~~~~~~~~~~~id~H~~~~~~~~p~~~~~  190 (279)
T PF00246_consen  159 ALRNLIQDWNPDFFIDFHSGGNAILYPYGYSY  190 (279)
T ss_dssp             HHHHHHHHTTEEEEEEEEESSSEEEESESSSS
T ss_pred             HHHHHHhhcceeEEEeccccccceeeeccccc
Confidence            99999999999999999999999999999864

; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....

>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3

Probab=100.00  E-value=4.5e-40  Score=335.98  Aligned_cols=205  Identities=22%  Similarity=0.395  Sum_probs=167.1

Q ss_pred             ccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccC-----ChhHHHhhcCceEEEEecc
Q psy8322          57 SVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRG-----DSNIRFLLDNTRIHLLPNL  131 (651)
Q Consensus        57 S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~-----d~~~~~ll~~~~~~iiP~~  131 (651)
                      |+|||+|++++|+++      +|.|+|+|++|||||+|+++++++++.|+..| +.     +..+++||++++|+|||++
T Consensus         1 S~eGR~I~~~~ig~~------~~~v~i~agiHarE~~~~~~~l~~i~~L~~~~-~~~~~~~~~~~~~lL~~~~i~ivP~~   73 (255)
T cd06229           1 SVLGRDIYEVKLGNG------PKTVFYNASFHAREWITTLLLMKFIEEYARAY-ENNEKLGGYDLRELLENVTICFVPMV   73 (255)
T ss_pred             CCCCceeeEEEEcCC------CceEEEECCccccchhhHHHHHHHHHHHHHHh-ccCccccchhHHHHHhcCeEEEEeCc
Confidence            789999999999975      38999999999999999999999999999987 33     3467999999999999999


Q ss_pred             Ccccccccccccc------------cCCC-----CCCCccCcCCCCCCCcccCCCC--CCCCC---CCCCCCCCcHHHHH
Q psy8322         132 NPDGSELAVEGNC------------RSGR-----GRNNINNHDLNRQFPDYFRHNR--SNIPT---LVSTSQSIDPEVQA  189 (651)
Q Consensus       132 NPDG~~~~~~~~r------------~~~~-----~r~n~~GvDLNRnf~~~w~~~~--s~~p~---y~G~~~~sepEt~a  189 (651)
                      |||||++++++.+            ++++     .|.||.|||||||||+.|...+  +.+||   |+|+.|||||||+|
T Consensus        74 NPDG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~s~~p~~~~y~G~~p~SEpEtra  153 (255)
T cd06229          74 NPDGVEIVQNGPYAIRNYYLELLVINAGSINFKEWKANARGVDLNRNFPAGWEKEKAGPKAPAPRNYKGEQPLSEPETIA  153 (255)
T ss_pred             cCCchheeeecccccccchhhhHHhhcCCCcccccccCCcccccCCCCCCCCCcCCCCCCCCCccCcCCCCCCCchhHHH
Confidence            9999999987532            2222     2679999999999999998764  67888   99999999999999


Q ss_pred             HHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccchhhhcccC
Q psy8322         190 VIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMN  269 (651)
Q Consensus       190 l~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dw~~  269 (651)
                      |++++.++++.++|++|+++++++|||+...  +       ...+.+.+..+..  .-+..+....  |+++|++.||+.
T Consensus       154 l~~~~~~~~~~~~i~~Hs~g~~i~~~~~~~~--~-------~~~~~~~~~~~~~--~gy~~~~~~~--~~~~G~~~Dw~~  220 (255)
T cd06229         154 LAELTRENRFRAVLAYHSQGEEIYWGYGGLE--P-------PESQKMAELLAEV--SGYELVDSES--KRSYGGYKDWFI  220 (255)
T ss_pred             HHHHHHhCCCeEEEEecCCCCeEEecCCCCC--c-------hHHHHHHHHHhhc--cCCccccccc--cCCCCCHHHHHH
Confidence            9999999999999999999999999998532  1       1112222222211  1144443333  899999999993


Q ss_pred             ---CCCeEEEEEeeCc
Q psy8322         270 ---SVPFVMSLQLHGG  282 (651)
Q Consensus       270 ---~~p~~~t~el~g~  282 (651)
                         ++| ++|+|++.+
T Consensus       221 ~~~gi~-s~t~El~~~  235 (255)
T cd06229         221 QKFRRP-GFTIEIGRG  235 (255)
T ss_pred             hhcCCe-EEEEEeCCC
Confidence               777 999999987

4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.

>KOG2650|consensus

Probab=100.00  E-value=5e-39  Score=340.79  Aligned_cols=233  Identities=23%  Similarity=0.290  Sum_probs=187.5

Q ss_pred             cccchhhhccc----CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHH
Q psy8322         258 DPEVQAVIDWM----NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGRE  333 (651)
Q Consensus       258 ~~~~g~~~dw~----~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~  333 (651)
                      |-.-..+++|+    ..+|..++....|.    +|       |||+|.+|||+.+.  +.+||+||++|||||||||+++
T Consensus       121 Y~~le~I~~~l~~l~~~~P~~v~~~~IG~----s~-------EgR~i~~lkIs~~~--~~~k~~I~id~GiHAREWIspA  187 (418)
T KOG2650|consen  121 YHSLEEIYEWLDNLAERYPDLVSLIHIGR----SY-------EGRPLKVLKISGGD--NRNKKAIFIDAGIHAREWISPA  187 (418)
T ss_pred             hcCHHHHHHHHHHHHHhCCCceEEEEccc----cc-------CCceEEEEEecCCC--CCCCceEEEecchhHHhhccHH
Confidence            44455677788    48999999999998    99       99999999998863  4589999999999999999999


Q ss_pred             HHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC------ceeEeeccCCCCCC----
Q psy8322         334 IILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP------PFLISLFLPFPVTK----  403 (651)
Q Consensus       334 ~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~------~~gvdlnrnf~~~~----  403 (651)
                      +++|++++|+..|++ |+.+++||+++||+|||++|||||+++++.||+|||+|++      ++||||||||++.|    
T Consensus       188 ta~~~i~qLv~~y~~-~~~~~~ll~~~dwyI~Pv~NPDGYeYS~t~~R~WRKnRs~~~~~~~C~GvDlNRNfd~~W~~~~  266 (418)
T KOG2650|consen  188 TALWFINQLVSSYGR-DPAVTKLLDKLDWYILPVVNPDGYEYSRTTDRLWRKNRSPNGCASRCIGVDLNRNFDFHWGGGK  266 (418)
T ss_pred             HHHHHHHHHHhhhcc-CHHHHHHHhcCcEEEEeeecCCcceeeecccccccccCCCCCCCCeeeCCCCCCCccCcCCCCC
Confidence            999999999999988 9999999999999999999999999999999999999974      58999999998553    


Q ss_pred             -------------CCCCCCCChHHHHHHHHHhhc---cCCCCcC---------CCCCC---CC-----------------
Q psy8322         404 -------------NKPALTPDTDVFLHLASTYAR---LHPTMHM---------KRPCP---GN-----------------  438 (651)
Q Consensus       404 -------------~~~~~~~~~~~f~~l~~~~a~---~~~~~~~---------~~~~~---~~-----------------  438 (651)
                                   ..+.++||+.+.+.+..+...   .+..+|.         +..|.   +.                 
T Consensus       267 Gas~~PCse~Y~G~~pfSEpEt~av~~fi~~~~~~i~~yislHSYsQ~llyPyg~~~~~~~~~~dl~~va~~a~~ai~~~  346 (418)
T KOG2650|consen  267 GASSDPCSETYAGPSPFSEPETRAVRDFITSFENNIKAYISLHSYSQLLLYPYGYTNDLPEDYEDLQEVARAAADALKSV  346 (418)
T ss_pred             CCCCCCCccccCCCCCCCcHHHHHHHHHHHhcCcceEEEEEecccceeEEecccccCCCCCCHHHHHHHHHHHHHHHHHH
Confidence                         356778888888888776422   1112222         11111   00                 


Q ss_pred             ccccccCcceeccceEeccCcccchhhh-ccceeEEEEEecc----cCCCCCCCcchhhhhchHHHHHHHHh
Q psy8322         439 TVLKFENGVTNGAAWYSFSGGMADYNYL-YHGCLELTLEISC----CRYPAPSEIPIHWRSNQNALISWLQQ  505 (651)
Q Consensus       439 ~~~~~~~gi~n~~~~y~~sG~~~D~~y~-~~~~~~~T~El~~----~~~p~~~~i~~~w~~nr~all~~~aq  505 (651)
                      .+..+..|.... ..||++|+++||+|. .+++++|||||+.    |+.||+.+|.+..+|.+.++..++.+
T Consensus       347 ~gt~Y~~G~~~~-~~y~asG~S~Dway~~~gi~~~ft~ELrd~g~~GF~LP~~~I~pt~~Et~~~i~~i~~~  417 (418)
T KOG2650|consen  347 YGTKYTVGSSAD-TLYPASGGSDDWAYDVLGIPYAFTFELRDTGRYGFLLPASQIIPTAKETWAGIKAIAEK  417 (418)
T ss_pred             hCCEEEeccccc-eeeccCCchHHHhhhccCCCEEEEEEeccCCCCCccCChHHhhhhHHHHHHHHHHHHhh
Confidence            233444443322 239999999999998 7999999999982    34489999999999999988877653

>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins

Probab=100.00  E-value=7.1e-37  Score=308.14  Aligned_cols=211  Identities=18%  Similarity=0.278  Sum_probs=171.5

Q ss_pred             CCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322          27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV  106 (651)
Q Consensus        27 ~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~  106 (651)
                      .-.+++|+.+||++|++.  +++++.+||+|+|||||++++|+++    ..||.|++.|++||+||+|+.++++|++.|+
T Consensus         6 ~~~~~~~i~~~l~~L~~~--~~v~~~~iG~S~eGR~i~~l~ig~~----~~k~~v~i~~~iH~~E~~g~~~~~~~~~~l~   79 (244)
T cd06237           6 ELIDNQDVKDWVDSLIKQ--PFVELELLGLSTQGRPLKALERGNP----DSKEWIVVISRQHPPEVTGALAMKAFIETLL   79 (244)
T ss_pred             eeCCHHHHHHHHHHHhcC--CCeEEEEeeEcCCCCEEEEEEecCC----CCCceEEEEcCcCCCcHHHHHHHHHHHHHHH
Confidence            346899999999999755  6799999999999999999999874    4689999999999999999999999999998


Q ss_pred             HHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHH
Q psy8322         107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPE  186 (651)
Q Consensus       107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepE  186 (651)
                      .    .++.++.+|++++|+|||++||||+++..        +|.|++||||||||+                 +++|||
T Consensus        80 ~----~~~~~~~ll~~~~i~ivP~~NPDG~~~~~--------wR~N~~GvDLNRnw~-----------------~~sepE  130 (244)
T cd06237          80 S----DSELAKKFRAKYNVLLVPNMNPDGVDLGH--------WRHNANGIDLNRDWS-----------------NFNQPE  130 (244)
T ss_pred             h----CCHHHHHHHHhCEEEEEEeeCcchhhcCC--------ccCCCCCcCCCCCCC-----------------CCCCHH
Confidence            6    34567999999999999999999999753        589999999999996                 689999


Q ss_pred             HHHHHHHHHhC-----CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhccc--CCccccccccccc
Q psy8322         187 VQAVIDWMNSV-----PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSN--IPTLVSTSQSIDP  259 (651)
Q Consensus       187 t~al~~~~~~~-----~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~  259 (651)
                      |+++.+++.+.     ++.+++|+|++++.++|||++......     ..+.   .+......+.  -+.... +...++
T Consensus       131 t~a~~~~~~~~~~~~~~~~~~id~Hs~~~~i~~~~~~~~~~~~-----p~~~---~~~~~~l~~~~~~Y~~~~-~~~~~~  201 (244)
T cd06237         131 TRAIRDYLVRLVKEGGKIVFALDFHSTWHDVFYTMPEDYKLQF-----PGFV---ADWLKELDKRILDYKVNN-RSGSSP  201 (244)
T ss_pred             HHHHHHHHHHHhccCCCEEEEEEeccCCcceEecCCCCCCccc-----chHH---HHHHHHhcCcCCCceecc-ccCccc
Confidence            99999999864     799999999999999999987543310     1111   1111111112  233332 233458


Q ss_pred             cchhhhccc---CCCCeEEEEEeeCc
Q psy8322         260 EVQAVIDWM---NSVPFVMSLQLHGG  282 (651)
Q Consensus       260 ~~g~~~dw~---~~~p~~~t~el~g~  282 (651)
                      ++|++.||+   .++| .+|+|++++
T Consensus       202 ~~g~~~Dw~~~~~~~~-~~T~E~g~~  226 (244)
T cd06237         202 DRGVSKQYFADEHGAH-AITYEVGDN  226 (244)
T ss_pred             CCCcHHHHHHHhCCCc-EEEEecCCC
Confidence            999999999   3788 999999876

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.

>cd03871 M14_CPB Peptidase M14 Carboxypeptidase B (CPB) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=6.8e-38  Score=324.48  Aligned_cols=221  Identities=18%  Similarity=0.177  Sum_probs=177.9

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..++....|.    +|       |||+|++|+|+++   ...||+|+++|++|||||+|++++++++++||++|++
T Consensus        21 ~~~p~~v~~~~IG~----S~-------eGR~i~~l~i~~~---~~~kp~v~i~~giHarE~i~~~~~l~~i~~l~~~y~~   86 (300)
T cd03871          21 SENPDLISRSQIGT----TF-------EGRPIYLLKVGKP---GVNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGR   86 (300)
T ss_pred             HHCCCceEEEEeee----CC-------CCCeeEEEEEccC---CCCCCeEEEeccccccccccHHHHHHHHHHHHHHccC
Confidence            47788888888887    88       9999999999875   3468999999999999999999999999999999977


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCC----------------CCCC
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTK----------------NKPA  407 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~----------------~~~~  407 (651)
                       |+.+++||++++|+|||++||||++++++.||+|||+|.+     +.|||||||||+.|                ..+.
T Consensus        87 -d~~~~~lL~~~~~~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~pc~~~Y~G~~p~  165 (300)
T cd03871          87 -EAIMTELLDKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGSSCIGTDPNRNFNAGWCTVGASRNPCDETYCGSAPE  165 (300)
T ss_pred             -CHHHHHHHHcCeEEEEEeecCCcCeeeeccCHHHHHhcCCCCCCCccccccCcCCCCccCCCCCCCCCCCCCcCCCCCC
Confidence             8999999999999999999999999999999999999875     38999999999665                3456


Q ss_pred             CCCChHHHHHHHHHhhc---cCCCCcCC---------CCCC--CC------------------ccccccCcceeccceEe
Q psy8322         408 LTPDTDVFLHLASTYAR---LHPTMHMK---------RPCP--GN------------------TVLKFENGVTNGAAWYS  455 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a~---~~~~~~~~---------~~~~--~~------------------~~~~~~~gi~n~~~~y~  455 (651)
                      ++||++++..+..+...   ....+|..         ..|.  .+                  ....+..|. .+..||+
T Consensus       166 SEpEt~Al~~~~~~~~~~~~~~l~~HSyg~~i~~Py~~~~~~~~~~~~~~~la~~~~~ai~~~~g~~y~~g~-~~~~~Y~  244 (300)
T cd03871         166 SEKETKALADFIRNNLSSIKAYLTIHSYSQMLLYPYSYTYKLPENHAELNSVAKGAVKELASLYGTKYTYGP-GATTIYP  244 (300)
T ss_pred             CCHHHHHHHHHHHhcCcceeEEEEeccCccEEEecCcCCCCCCCCHHHHHHHHHHHHHHHHHhhCCCCcCCc-ccccccc
Confidence            78899999988776421   11122220         0010  00                  011122222 2457899


Q ss_pred             ccCcccchhhhccceeEEEEEeccc---CC-CCCCCcchhhhhchHHHHHHHHh
Q psy8322         456 FSGGMADYNYLYHGCLELTLEISCC---RY-PAPSEIPIHWRSNQNALISWLQQ  505 (651)
Q Consensus       456 ~sG~~~D~~y~~~~~~~~T~El~~~---~~-p~~~~i~~~w~~nr~all~~~aq  505 (651)
                      ++|+++||+|..+++++|||||+|.   +| ||.++|.++++|.+..+..++..
T Consensus       245 a~G~s~Dw~y~~~~~~s~t~El~~~g~~gf~lp~~~I~~~~~E~~~~i~~~~~~  298 (300)
T cd03871         245 AAGGSDDWAYDQGIKYSFTFELRDKGRYGFLLPESQIKPTCEETMLAVKYIANY  298 (300)
T ss_pred             CCCCHHHHHhcCCCcEEEEEEeCCCCCCCCCCCHHHCccccHHHHHHHHHHHHh
Confidence            9999999999999999999999873   34 78999999999999998887654

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Carboxypeptidase B (CPB) enzymes only cleave the basic residues lysine or arginine. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase B (PCPB) is produced by the exocrine pancreas and stored as stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. PCPB has been reported to be a good serum marker for the diagnosis of acute pancreatitis and graft rejection in pancreas transplant recipients.

>cd06246 M14_CPB2 Peptidase M14 Carboxypeptidase (CP) B2 (CPB2, also known as plasma carboxypeptidase B, carboxypeptidase U, and CPU), belongs to the carboxpeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=1.2e-37  Score=323.21  Aligned_cols=222  Identities=18%  Similarity=0.160  Sum_probs=179.7

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..+++...|.    +|       |||+|++|+|++++  +..||+||++|+||||||+|++++++++++|++.|+.
T Consensus        20 ~~~p~~v~~~~iG~----S~-------egR~I~~l~is~~~--~~~k~~v~i~~giHarE~i~~~~~l~~i~~Ll~~~~~   86 (300)
T cd06246          20 ERHSDMLEKIHIGS----SF-------EKRPLYVLKVSGKE--QTAKNAIWIDCGIHAREWISPAFCLWFVGHATQFYGI   86 (300)
T ss_pred             HHCCCcEEEEeccc----CC-------CCCeEEEEEEeCCC--CCCCCeEEEecccCccchhhHHHHHHHHHHHHHHhcC
Confidence            46888899998888    89       99999999998754  4579999999999999999999999999999999987


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC----------------CCC
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN----------------KPA  407 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~----------------~~~  407 (651)
                       |+.+++||++++|+|||++||||++++++++++|||+|.     ++.|||||||||+.|.                .+.
T Consensus        87 -d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~r~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~~y~G~~p~  165 (300)
T cd06246          87 -DGQMTNLLRHMDFYIMPVMNVDGYDYTWKKNRMWRKNRSFYANSHCIGTDLNRNFDAKWCCEGASSSSCSETYCGPYPE  165 (300)
T ss_pred             -CHHHHHHHHhCeEEEEEeecCCceeEEEeccceeecCCCCCCCCCccCcccccccccccCCCCCCCCCCCCCcCCCCCC
Confidence             899999999999999999999999999999999999996     4689999999996553                356


Q ss_pred             CCCChHHHHHHHHHhhc---cCCCCcCCC---------CCCCC--------------------ccccccCcceeccceEe
Q psy8322         408 LTPDTDVFLHLASTYAR---LHPTMHMKR---------PCPGN--------------------TVLKFENGVTNGAAWYS  455 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a~---~~~~~~~~~---------~~~~~--------------------~~~~~~~gi~n~~~~y~  455 (651)
                      ++||++++..+..+...   ....+|...         .+...                    ....+..|.. ...||+
T Consensus       166 SEpEt~av~~~~~~~~~~i~~~is~Hs~g~~i~~P~~~~~~~~~~~~~~~~la~~~~~ai~~~~~~~y~~g~~-~~~~Y~  244 (300)
T cd06246         166 SEPEVKAVASFLRRHINQIKAYISMHSYSQMILFPYSYTRSKSKDHEELSLLAKEAVRAIRRTSNNRYTHGSG-AETIYL  244 (300)
T ss_pred             ccHHHHHHHHHHHhCCcceeEEEEeccCCcEEEeccccCCCCCCCHHHHHHHHHHHHHHHHHhhCCCCeecCC-CCeeec
Confidence            78899999888876521   111223211         11100                    0112222321 224799


Q ss_pred             ccCcccchhhhccceeEEEEEeccc---C-CCCCCCcchhhhhchHHHHHHHHh
Q psy8322         456 FSGGMADYNYLYHGCLELTLEISCC---R-YPAPSEIPIHWRSNQNALISWLQQ  505 (651)
Q Consensus       456 ~sG~~~D~~y~~~~~~~~T~El~~~---~-~p~~~~i~~~w~~nr~all~~~aq  505 (651)
                      ++|+++||+|..+++++|||||+|+   + .||+++|.+..+|.+.++..++.+
T Consensus       245 a~G~s~Dw~y~~~~~~s~t~El~~~g~~gF~lp~~~I~p~~~E~~~~~~~~~~~  298 (300)
T cd06246         245 APGGSDDWAYDLGIKYSFTFELRDTGTYGFLLPESYIKPTCSEALAAVKKIAWH  298 (300)
T ss_pred             cCCChhhHhhcCCCCEEEEEEecCCCCCCCCCCHHHcccccHHHHHHHHHHHHh
Confidence            9999999999999999999999875   3 489999999999999999887654

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPB2 enzyme displays B-like activity; it only cleaves the basic residues lysine or arginine. It is produced and secreted by the liver as the inactive precursor, procarboxypeptidase U or PCPB2, commonly referred to as thrombin-activatable fibrinolysis inhibitor (TAFI). It circulates in plasma as a zymogen bound to plasminogen, and the active enzyme, TAFIa, inhibits fibrinolysis. It is highly regulated, increased TAFI concentrations are thought to increase the risk of thrombosis and coronary artery disease by reducing fibrinolytic activity whil

>cd06247 M14_CPO Peptidase M14 carboxypeptidase (CP) O (CPO, also known as metallocarboxypeptidase C; EC 3

Probab=100.00  E-value=2.3e-37  Score=319.92  Aligned_cols=222  Identities=18%  Similarity=0.164  Sum_probs=180.7

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..++++..|.    +|       |||+|++|+||++.  +..||.||++|+||||||+|++++++++++||++|..
T Consensus        19 ~~~p~~v~l~~iG~----S~-------EgR~I~~l~i~~~~--~~~k~~i~i~~giHarEwi~~~~~l~~i~~Ll~~y~~   85 (298)
T cd06247          19 EKYSELVSQHYLGC----TY-------ELRPMYYLKIGWPS--DKPKKIIWMDCGIHAREWISPAFCQWFVKEILQNYKT   85 (298)
T ss_pred             HHCCCcEEEEeceE----Cc-------CCceEEEEEeecCC--CCCCcEEEEeccccccccccHHHHHHHHHHHHHHhcc
Confidence            47888888888888    88       99999999998753  3468999999999999999999999999999999976


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC----------------CCC
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN----------------KPA  407 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~----------------~~~  407 (651)
                       |+.+++||++++|+|||++|||||+++++.+|+|||+|.     +++||||||||++.|.                .+.
T Consensus        86 -d~~~~~ll~~~~i~ivP~~NPDGy~ys~~~~r~wRknr~~~~~~~c~GVDLNRNf~~~w~~~g~s~~p~~~~y~G~~pf  164 (298)
T cd06247          86 -DPILRKVLKNVDFYVLPVLNIDGYIYTWTTDRLWRKNRSPHNNGTCYGVDLNRNFNSQWCSIGASRNCRSNIFCGTGPE  164 (298)
T ss_pred             -CHHHHHHHhcCeEEEEeeecCCcceEEecccceecccCCCCCCCCccccccccCCCCccccCCCCCCCCCCCcCCCCCC
Confidence             899999999999999999999999999999999999996     4589999999997553                357


Q ss_pred             CCCChHHHHHHHHHhhcc---CCCCcCC---------CCCCCC--------------------ccccccCcceeccceEe
Q psy8322         408 LTPDTDVFLHLASTYARL---HPTMHMK---------RPCPGN--------------------TVLKFENGVTNGAAWYS  455 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a~~---~~~~~~~---------~~~~~~--------------------~~~~~~~gi~n~~~~y~  455 (651)
                      ++||+.+++.+..+....   ...+|..         ..|...                    ....|..|... ..+|+
T Consensus       165 SEpEt~ai~~~~~~~~~~i~~~l~~Hsyg~~i~~P~g~~~~~~~n~~~~~~~a~~~~~ai~~~~~~~y~~g~~~-~~~y~  243 (298)
T cd06247         165 SEPETKAVARLIESKKSDILCYLTIHSYGQLILLPYGYTKEPSSNHEEMMLVAQKAAAALKEKHGTEYRVGSSA-LILYS  243 (298)
T ss_pred             CcHHHHHHHHHHHhcCcceEEEEEeccCCCeEEeCCcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCccCCcc-ccccc
Confidence            889999999998876311   1122220         011100                    11234444432 34699


Q ss_pred             ccCcccchhhhccceeEEEEEecc----cCCCCCCCcchhhhhchHHHHHHHHh
Q psy8322         456 FSGGMADYNYLYHGCLELTLEISC----CRYPAPSEIPIHWRSNQNALISWLQQ  505 (651)
Q Consensus       456 ~sG~~~D~~y~~~~~~~~T~El~~----~~~p~~~~i~~~w~~nr~all~~~aq  505 (651)
                      ++|+++||+|..+++++|||||++    ++.||+++|.+..+|++.++..++..
T Consensus       244 a~G~s~Dwa~~~~~~~s~t~El~~~g~~gF~lp~~~I~p~~~E~~~~i~~~~~~  297 (298)
T cd06247         244 NSGSSRDWAVDIGIPFSYTFELRDNGTYGFVLPEDQIQPTCEETMTAVMSMVEY  297 (298)
T ss_pred             CCCChhhhhhccCCCEEEEEEeCCCCCCCCCCChHHCcchhHHHHHHHHHHHhh
Confidence            999999999998999999999986    34499999999999999999887653

4.17.) belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPO has not been well characterized as yet, and little is known about it. Based on modeling studies, CPO has been suggested to have specificity for acidic residues rather than aliphatic/aromatic residues as in A-like enzymes or basic residues as in B-like enzymes. It remains to be demonstrated that CPO is functional as an MCP.

>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins

Probab=100.00  E-value=1.7e-36  Score=307.29  Aligned_cols=224  Identities=21%  Similarity=0.304  Sum_probs=176.7

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLL  102 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~  102 (651)
                      |.|-..++|+++.++|+.+++ . ..+++.+||+|+|||+|++|+|+++   ..+||.|||+|++||+|++|..++..|+
T Consensus         5 ~ay~~Pys~~~~~~~l~~~~~-~-~~v~~~~iG~S~eGR~i~~l~I~~~---~~~k~~V~i~a~iH~~E~~g~~~~~~ll   79 (263)
T cd06234           5 FAYFAPYSYERHLALIARAQG-A-PDVRLEVLGQTVQGRDIDLLTFGEP---GPGKKKLWIIARQHPGETMAEWFMEGLL   79 (263)
T ss_pred             EEEeCCCCHHHHHHHHHHHhc-C-CCeEEEEEEEcCCCCeEEEEEEccC---CCCCCEEEEECCCCCCcHHHHHHHHHHH
Confidence            456678899999999999976 3 4799999999999999999999874   2478999999999999999999999999


Q ss_pred             HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCC
Q psy8322         103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQS  182 (651)
Q Consensus       103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~  182 (651)
                      +.|+.   ..|+.++++|++++|+|||++||||+++.+        .|.||.||||||||+              ++.++
T Consensus        80 ~~L~~---~~d~~~~~ll~~~~~~IvP~~NPDG~~~g~--------~R~n~~GvDLNRnw~--------------~p~~~  134 (263)
T cd06234          80 ERLLD---PDDAVARALLEKAVFYVVPNMNPDGSARGH--------LRTNAAGANLNREWA--------------EPSAE  134 (263)
T ss_pred             HHHhh---cCCHHHHHHHhcCEEEEEeeecchhhhhcC--------CccCCCCCCCCCCCC--------------CCCCC
Confidence            99998   458899999999999999999999999875        588999999999997              67899


Q ss_pred             CcHHHHHHHHHHHhCCcEEEEEEecCceeeeecccccc--CCCCCCCCchhhhhhhhHHHHhh-cccCCcccc--ccccc
Q psy8322         183 IDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFY--GESKNNINNHDLNRQFPDYFRHN-RSNIPTLVS--TSQSI  257 (651)
Q Consensus       183 sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~--~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~--~~~~~  257 (651)
                      ++||+++|+++|++.++++++|+|+++++   ||++..  ...|++  ..++ +.+.+.+..+ .+..+.+..  .+...
T Consensus       135 s~PEt~av~~~~~~~~~~~~ld~Hs~~~~---py~f~~g~~~~p~~--~~~l-~~l~~~~~~al~~~~~~f~~~~~y~~~  208 (263)
T cd06234         135 RSPEVFAVRQRMEETGVDFFLDVHGDEAL---PYNFIAGSEGVPGW--TPRL-AALEARFKAALLRASPDFQTEHGYPKD  208 (263)
T ss_pred             CCHHHHHHHHHHHhcCCeEEEEeCCCCCC---CccEeccCCCCCCc--cHHH-HHHHHHHHHHHHHhCcccccccccCCC
Confidence            99999999999999999999999999996   998873  333322  1122 2222222222 222232221  11222


Q ss_pred             ---cccchhhhcccC--CCCeEEEEEeeCc
Q psy8322         258 ---DPEVQAVIDWMN--SVPFVMSLQLHGG  282 (651)
Q Consensus       258 ---~~~~g~~~dw~~--~~p~~~t~el~g~  282 (651)
                         ++..+.+.+|+.  .-..++|+|++-+
T Consensus       209 ~~g~~~~~~a~~~~~~~~~~~s~TlEmpf~  238 (263)
T cd06234         209 APGQANLTIATNWVAHRFDCLSMTLEMPFK  238 (263)
T ss_pred             CCCchhHHHHHHHHHhhcCceEEEEEeecC
Confidence               334566678883  3378999999876

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.

>cd03872 M14_CPA6 Carboxypeptidase (CP) A6 (CPA6, also known as CPAH; EC 3

Probab=100.00  E-value=3.3e-37  Score=318.61  Aligned_cols=223  Identities=16%  Similarity=0.152  Sum_probs=180.2

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..++++..|.    +|       |||+|++|+||++.  ...||.|+++|+||||||+|++++++++++|+++|..
T Consensus        17 ~~~p~~v~l~~iG~----S~-------EGR~i~~l~i~~~~--~~~k~~i~i~~giHarEwi~~~~~~~~i~~Ll~~~~~   83 (300)
T cd03872          17 KTHSDLVHLFSIGK----SY-------EGRSLYVLKLGKRT--RSYKKAVWIDCGIHAREWIGPAFCQWFVKEALNSYQT   83 (300)
T ss_pred             HHCCCceEEEEeee----cC-------CCCceEEEEEecCC--CCCCCeEEEecccccccccCHHHHHHHHHHHHHhccC
Confidence            47888899988888    89       99999999999764  3479999999999999999999999999999999977


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCC----------------CCCC
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTK----------------NKPA  407 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~----------------~~~~  407 (651)
                       |+.+++||++++|+|||++|||||++++++||+|||+|.+     ++||||||||++.|                ..+.
T Consensus        84 -d~~~~~lL~~~~~~ivP~vNPDGy~ys~~~~r~wrknR~~~~~~~c~GVDLNRNf~~~w~~~g~s~~Pcs~~Y~G~~pf  162 (300)
T cd03872          84 -DPAMKKMLNQLYFYVMPVFNVDGYHYSWTNDRFWRKTRSKNSRYQCRGVDANRNWKVKWCDEGASLHPCDDTYCGPFPE  162 (300)
T ss_pred             -ChHHHHHHhhCeEEEEeeecCCcceeeeccchhhhccCCCCCCCCccccccccccCcccCCCCCCCCCCCCCCCCCCCC
Confidence             8999999999999999999999999999999999999875     59999999999654                3457


Q ss_pred             CCCChHHHHHHHHHhhc---cCCCCcC---------CCCCCCC--------------------ccccccCcceeccceEe
Q psy8322         408 LTPDTDVFLHLASTYAR---LHPTMHM---------KRPCPGN--------------------TVLKFENGVTNGAAWYS  455 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a~---~~~~~~~---------~~~~~~~--------------------~~~~~~~gi~n~~~~y~  455 (651)
                      ++||++++..+..+...   ....+|.         +..|...                    ....|..|... ..+|+
T Consensus       163 SEpEt~al~~~~~~~~~~i~~~ls~Hsyg~~i~~P~g~~~~~~~~~~~~~~~~~~~~~ai~~~~~~~Y~~g~~~-~~lY~  241 (300)
T cd03872         163 SEPEVKAVAQFLRKHRKHVRAYLSFHAYAQMLLYPYSYKYATIPNFGCVESAAYNAVNALQSAYGVRYRYGPAS-STLYV  241 (300)
T ss_pred             CcHHHHHHHHHHHhCCccceEEEEEccCCcEEEecCCCcCCCCCChHHHHHHHHHHHHHHHHhhCCCCcccCcc-cceec
Confidence            88999999888876521   1112222         0111100                    11223333322 13599


Q ss_pred             ccCcccchhhhccceeEEEEEeccc----CCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         456 FSGGMADYNYLYHGCLELTLEISCC----RYPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       456 ~sG~~~D~~y~~~~~~~~T~El~~~----~~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      ++|++.||+|..+++++||+||+..    +.||+++|.+..+|+++++..++.++
T Consensus       242 a~G~s~Dw~y~~~i~~s~t~EL~~~g~~gF~lp~~~I~p~~~E~~~~i~~~~~~~  296 (300)
T cd03872         242 SSGSSMDWAYKNGIPYAFAFELRDTGYYGFLLPEGLIKPTCTETMLAVKNITMHL  296 (300)
T ss_pred             CCCCHHHHhhcCCCcEEEEEEeCCCCCCCCcCCHHHCCcccHHHHHHHHHHHHHH
Confidence            9999999999889999999999853    34899999999999999999887654

4.17.1), belongs to the carboxypeptidase A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA6 prefers large hydrophobic C-terminal amino acids as well as histidine, while peptides with a penultimate glycine or proline are very poorly cleaved. Several neuropeptides are processed by CPA6, including Met- and Leu-enkephalin, angiotensin I, and neurotensin. CPA6 converts enkephalin and neurotensin into forms known to be inactive toward their receptors, but converts inactive angiotensin I into the biologically active angiotensin II. Thus, CPA6 plays a possible role in the regulation of neuropeptides in the extracellular environment within the olfactory bulb where it is highly expresse

>cd03870 M14_CPA Peptidase M14 Carboxypeptidase (CP) A (CPA) belongs to the A/B subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=6.6e-37  Score=317.60  Aligned_cols=222  Identities=18%  Similarity=0.175  Sum_probs=179.6

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..++++..|.    ++       |||+|++|+||+++   ..||+|+++|++|||||+|++++++++++|+.+|.+
T Consensus        21 ~~~p~~v~~~~iG~----S~-------eGR~I~~l~is~~~---~~kp~v~i~~giHarE~i~~~~~l~~~~~L~~~~~~   86 (301)
T cd03870          21 AEHPNLVSKLQIGR----SY-------EGRPIYVLKFSTGG---SNRPAIWIDAGIHSREWITQATGVWFAKKITEDYGQ   86 (301)
T ss_pred             HHCCCceEEEeccc----CC-------CCCeEEEEEEecCC---CCCceEEEeccccccchhhHHHHHHHHHHHHHhccc
Confidence            46788888888887    88       99999999999764   378999999999999999999999999999999977


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC----------------CCC
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN----------------KPA  407 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~----------------~~~  407 (651)
                       |+.+++||++++|+|||++||||++++++.+|+|||+|.     +++|||||||||+.|+                .+.
T Consensus        87 -d~~~~~lLd~~~i~ivP~~NPDG~~~s~~~~r~wrknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~~~~Y~G~~pf  165 (301)
T cd03870          87 -DPSFTAILDSMDIFLEIVTNPDGYVFTHSQNRLWRKTRSVTSGSLCVGVDPNRNWDAGFGGAGASSNPCSETYHGPYAN  165 (301)
T ss_pred             -CHHHHHHHHhCcEEEEeeecCchhhheecccceeecCCCCCCCCCccccccccCCCcccCcCCCCCCCCccccCCCCCC
Confidence             899999999999999999999999999999999999997     4699999999997653                346


Q ss_pred             CCCChHHHHHHHHHhh--ccCCCCcCC---------CCCCCC--------------------ccccccCcceeccceEec
Q psy8322         408 LTPDTDVFLHLASTYA--RLHPTMHMK---------RPCPGN--------------------TVLKFENGVTNGAAWYSF  456 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a--~~~~~~~~~---------~~~~~~--------------------~~~~~~~gi~n~~~~y~~  456 (651)
                      ++||+++++.+.....  .....+|..         ..|...                    ....+..|... ..||++
T Consensus       166 SEpEt~av~~~~~~~~~~~~~l~lHS~g~~i~yP~~~~~~~~~~~~~~~~la~~~~~ai~~~~g~~y~~g~~~-~~~y~a  244 (301)
T cd03870         166 SEVEVKSIVDFVKSHGNFKAFISIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKYGSII-TTIYQA  244 (301)
T ss_pred             ccHHHHHHHHHHhhCCCeEEEEEeccCCceEEecCcCCCCCCCCHHHHHHHHHHHHHHHHHhcCCcccccccc-ceeecC
Confidence            7899999998876531  111122221         011100                    11223333332 357999


Q ss_pred             cCcccchhhhccceeEEEEEeccc----CCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         457 SGGMADYNYLYHGCLELTLEISCC----RYPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       457 sG~~~D~~y~~~~~~~~T~El~~~----~~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      +|+++||+|..+++++|||||+++    ++||+++|.+..+|.+..+..++.+.
T Consensus       245 ~G~s~Dw~y~~~~~~s~t~El~~~g~~gF~lP~~~i~p~~~E~~~~i~~~~~~~  298 (301)
T cd03870         245 SGGSIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGLLTIMEHT  298 (301)
T ss_pred             CCChhhhhhcCCCcEEEEEEeCCCCCCCCCCChHHCchhhHHHHHHHHHHHHHH
Confidence            999999999999999999999874    34899999999999999998887653

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPA enzymes generally favor hydrophobic residues. A/B subfamily enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The procarboxypeptidase A (PCPA) is produced by the exocrine pancreas and stored as a stable zymogen in the pancreatic granules until secretion into the digestive tract occurs. This subfamily includes CPA1, CPA2 and CPA4 forms. Within these A forms, there are slightly different specificities, with CPA1 preferring aliphatic and small aromatic residues, and CPA2 p

>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins

Probab=100.00  E-value=3.7e-36  Score=304.10  Aligned_cols=213  Identities=18%  Similarity=0.270  Sum_probs=169.0

Q ss_pred             HHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC--CCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChh
Q psy8322          38 LENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP--VHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSN  115 (651)
Q Consensus        38 l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~--~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~  115 (651)
                      |++|+++||+++++++||+|+|||+|++|+|++++  ....+||.|||.|++||+||+|++++++|+++|+.    .|+.
T Consensus         1 l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~It~~~~~~~~~~k~~I~i~ariHp~E~~~s~~~~~li~~L~~----~~~~   76 (261)
T cd06908           1 LDALEKRSLDYFRREQLGQSVQKRRLDLLTIDSPDNLREDSEKKVIFITARVHPGESPSSYVCQGLIDFLVS----NHPI   76 (261)
T ss_pred             ChHHHhhCCCcEEEEEeEEcCCCCeeEEEEEcCCCccccCCCCcEEEEECCcCCCChHHHHHHHHHHHHHhh----CCHH
Confidence            56889999999999999999999999999999864  12357999999999999999999999999999996    3899


Q ss_pred             HHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH
Q psy8322         116 IRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMN  195 (651)
Q Consensus       116 ~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~  195 (651)
                      ++.|+++++|+||||+||||+++..        .|.+|.|+||||||+              ++.|+++||+++++++++
T Consensus        77 ~~~L~~~~~~~IvP~~NPDGv~~gn--------~R~~~~G~DLNR~w~--------------~p~~~~~PEv~av~~~i~  134 (261)
T cd06908          77 AKVLREHLVFKIVPMLNPDGVFLGN--------YRCSLMGHDLNRHWH--------------DPSPWAHPTLHAVKNLLK  134 (261)
T ss_pred             HHHHHHhCcEEEEeeecCcceeecC--------CcCcCcCcCCCCCCC--------------CCCcccChHHHHHHHHHH
Confidence            9999999999999999999999875        589999999999997              678999999999999998


Q ss_pred             hC------CcEEEEEEecCceee-eeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcccc--ccccccccchhhhc
Q psy8322         196 SV------PFVMSLQLHGGNVVA-SYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVS--TSQSIDPEVQAVID  266 (651)
Q Consensus       196 ~~------~~~~~i~~H~~~~~~-~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~g~~~d  266 (651)
                      ++      ++.+++|+||+++++ +||||++...++    +......++.+.+...........  ....-.+.++.+.=
T Consensus       135 ~~~~~~~~~i~~~lD~H~hs~~~~~F~yG~~~~~~~----~~~~~~~fp~~l~~~~~~F~~~~~~f~~~~~k~gtar~~~  210 (261)
T cd06908         135 ELDNDSTTQLDFYIDLHAHSSLMNCFIYGNTYDDVY----RYERQLVFPKLLAQNAEDFSMEHTMFNRDAVKAGTGRRFL  210 (261)
T ss_pred             HhhhccccCeeEEEEeeccccccceeeccccCCccc----cHHHHHHHHHHHHHhCHHhcccCCcccCCCCCCChHHHHH
Confidence            74      699999999999998 899999865432    344445666666555432211000  01122233333322


Q ss_pred             cc-CC-CCeEEEEEee
Q psy8322         267 WM-NS-VPFVMSLQLH  280 (651)
Q Consensus       267 w~-~~-~p~~~t~el~  280 (651)
                      |- .+ ++.++|+|..
T Consensus       211 ~~~~~~~~~s~TlE~s  226 (261)
T cd06908         211 GSLLSDNVNCYTLEVS  226 (261)
T ss_pred             HHHhCCCceEEEEeec
Confidence            22 25 4788888875

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal

>cd06248 M14_CPA_CPB_like Peptidase M14 Carboxypeptidase A/B-like subfamily: This is one of two main M14 carboxypeptidase subfamilies, defined by sequence and structural homology, the other being N/E

Probab=100.00  E-value=2.5e-36  Score=314.93  Aligned_cols=223  Identities=21%  Similarity=0.258  Sum_probs=178.8

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..++++..|.    ++       |||+|++|+|+++......||+|+++|+||||||+|++++++++++|+++|..
T Consensus        19 ~~~p~~v~~~~iG~----S~-------eGR~i~~l~I~~~~~~~~~k~~v~i~~giHarE~~~~~~~l~~~~~L~~~~~~   87 (304)
T cd06248          19 AAFPNNSELFTIGK----SY-------EGRTILGLHIWGSGGEKGSKPAIVIHGTVHAREWISTMTVEYLAYQLLTGYGS   87 (304)
T ss_pred             HHCCCceEEeceEE----CC-------CCCeEEEEEEecCCCCCCCCcEEEEECCcCcCccccHHHHHHHHHHHHHhhcc
Confidence            36777788888887    88       99999999999765434679999999999999999999999999999999987


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCCC----------------CCC
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTKN----------------KPA  407 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~~----------------~~~  407 (651)
                       |+.++.||++++|+|||++||||+++++.+||+|||+|.+     +.|||||||||+.|.                .+.
T Consensus        88 -d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wRknr~~~~~~~~~GVDLNRNf~~~w~~~g~s~~p~s~~Y~G~~~~  166 (304)
T cd06248          88 -DATVTALLDKFDFYIIPVVNPDGFVYTQTSDRLWRKNRQPTSGSSCVGTDLNRNWPYKWDGGGSSTNPCSETYRGESPG  166 (304)
T ss_pred             -CHHHHHHHHhCcEEEEeeecCchhhhhccchhhhhhcCCCCCCCCceeecCCCCCCCcccCCCCCCCCCCCCcCCCCCC
Confidence             8999999999999999999999999999999999999963     589999999997664                357


Q ss_pred             CCCChHHHHHHHHHhhc-----cCCCCcCC---------CCC---CCC------------------ccccccCcceeccc
Q psy8322         408 LTPDTDVFLHLASTYAR-----LHPTMHMK---------RPC---PGN------------------TVLKFENGVTNGAA  452 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a~-----~~~~~~~~---------~~~---~~~------------------~~~~~~~gi~n~~~  452 (651)
                      ++||+++++.+..++..     ....+|..         ..+   +..                  ....+..|.. ...
T Consensus       167 sEpEt~av~~~~~~~~~~~~~~~~l~~Hs~~~~i~~P~~~~~~~~~~d~~~~~~la~~~a~ai~~~~g~~y~~g~~-~~~  245 (304)
T cd06248         167 DAPEAKALAAFLNKLAEGQGIVGYIDWHSYSQLILYPYGYSCDAVPPNLENLEELAAGLAKAIRAVSGTTYTVGPA-CNT  245 (304)
T ss_pred             ccHHHHHHHHHHHhccccCceEEEEEeccCcceEEecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCccccc-ccc
Confidence            89999999988876421     11112210         011   111                  0112333332 246


Q ss_pred             eEeccCcccchhhhccc-eeEEEEEecc----cCCCCCCCcchhhhhchHHHHHHHH
Q psy8322         453 WYSFSGGMADYNYLYHG-CLELTLEISC----CRYPAPSEIPIHWRSNQNALISWLQ  504 (651)
Q Consensus       453 ~y~~sG~~~D~~y~~~~-~~~~T~El~~----~~~p~~~~i~~~w~~nr~all~~~a  504 (651)
                      ||+++|+++||+|...+ +++|||||++    ++.||+++|.+..+|++..+..++.
T Consensus       246 ~y~~~G~~~D~~y~~~gi~~~~t~El~~~~~~gf~~p~~~i~p~~~e~~~~~~~~~~  302 (304)
T cd06248         246 LYQTTGSSVDWVYHVAGAAWSYQLELRDTGTYGFVLPAKQIIPTGEETWAGIKYLLK  302 (304)
T ss_pred             cccCCCCcchhhhccCCCcEEEEEEeCCCCCCCCCCCHHHCcchhHHHHHHHHHHHh
Confidence            89999999999998755 9999999986    3448999999999999999988764

Carboxypeptidases (CPs) hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Majority of the proteins in this subfamily have not been characterized as yet. The A/B enzymes are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; the proenzymes are called procarboxypeptidases. These enzymes exhibit distinct substrate specificity pattern; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5,

>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=2.1e-35  Score=301.33  Aligned_cols=205  Identities=22%  Similarity=0.350  Sum_probs=163.5

Q ss_pred             CCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccc
Q psy8322          59 LGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL  138 (651)
Q Consensus        59 egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~  138 (651)
                      ...||++|+|++.   ...||.|+|+||+||+||+|+++++++++.|+..| +.|+.++++|++++|+|||++||||+.+
T Consensus         8 ~~~pi~~v~ig~~---~~~~p~v~i~~giHg~E~ig~~~~l~~l~~L~~~~-~~d~~~~~ll~~~~i~ivP~vNPdG~~~   83 (273)
T cd03862           8 LRFPIYALELGSP---DPKAPVLGLVGGVHGLERIGTQVLLAFLESLLERL-RWDKLLQELLEKVRLVFLPLVNPVGMAL   83 (273)
T ss_pred             CcceeEEEEecCC---CCCCCEEEEEcCcCCCcHHHHHHHHHHHHHHHHhc-cccHHHHHHHhCCeEEEEeccCcCHHHh
Confidence            4569999999874   25689999999999999999999999999999988 7789999999999999999999999875


Q ss_pred             cccccccCCCCCCCccCcCCCCCCCcccCC------CC-CCCCC---CCCCC-CCCcHHHHHHHHHHHhC----CcEEEE
Q psy8322         139 AVEGNCRSGRGRNNINNHDLNRQFPDYFRH------NR-SNIPT---LVSTS-QSIDPEVQAVIDWMNSV----PFVMSL  203 (651)
Q Consensus       139 ~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~------~~-s~~p~---y~G~~-~~sepEt~al~~~~~~~----~~~~~i  203 (651)
                      .         .|.|++|||||||||..|..      .+ +.+||   |+|+. |+||||++||+++++++    ++.+++
T Consensus        84 ~---------~R~n~~GVDLNRNfp~~~~~~~~~~~~G~~~~p~~~~Y~G~~~~~sEpEt~al~~~~~~~~~~~~~~~~l  154 (273)
T cd03862          84 K---------TRSNGNGVDLMRNAPVDAEDKPPFLVGGQRLSPRLPWYRGKNGAGMELEAQALCRFVRELLFESPFSIAL  154 (273)
T ss_pred             c---------ccCCCCCcccCCCCCCCccccccccccCccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCeEEEE
Confidence            4         37899999999999999863      22 45677   99987 99999999999999985    689999


Q ss_pred             EEecC---ceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc-ccCCccccccccccccchhhhcccC---------C
Q psy8322         204 QLHGG---NVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR-SNIPTLVSTSQSIDPEVQAVIDWMN---------S  270 (651)
Q Consensus       204 ~~H~~---~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~g~~~dw~~---------~  270 (651)
                      |+|+|   +++++|||++++...++   ..+++ .+.+.+.... ...+.+++.+. +|+++|++.||+.         +
T Consensus       155 d~HSg~G~~~~i~~Pyg~~~~~~~~---~~~~~-~l~~~~~~~~~~~~Y~~g~~s~-~Y~a~G~~~D~~y~~~~~~~~~~  229 (273)
T cd03862         155 DCHSGFGLVDRIWFPYAYTKEPIPH---LAEIY-ALKELLERTYPNHVYRFEPQSR-HYLTHGDLWDYLYDQHQKQQPNG  229 (273)
T ss_pred             EECCCCCccCEEEcCCcCCCCCCCC---HHHHH-HHHHHHHHhCCCCceEECCcce-eEECCCCHHHHHHhhcCcccccc
Confidence            99995   48999999998766432   22332 2333333221 12455555555 7999999999994         2


Q ss_pred             CCeEEEEEeeC
Q psy8322         271 VPFVMSLQLHG  281 (651)
Q Consensus       271 ~p~~~t~el~g  281 (651)
                      ....+|+|+.-
T Consensus       230 ~~l~~TlE~Gt  240 (273)
T cd03862         230 RFLPLTLEMGS  240 (273)
T ss_pred             cceeEEEEeec
Confidence            24577888753

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=100.00  E-value=3.2e-35  Score=300.59  Aligned_cols=215  Identities=19%  Similarity=0.255  Sum_probs=175.0

Q ss_pred             CCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322          27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV  106 (651)
Q Consensus        27 ~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~  106 (651)
                      .-.+|.+....++.++   |..+++.+||+|.+||+|++++++..    .+||.|||.|++||+||+|+++++++++.|+
T Consensus         9 ~~~~y~~~~~l~~sl~---~~~v~l~~IG~s~egr~i~~~~~~~~----~~k~~i~i~a~iH~~E~~~~~~~~~li~~Ll   81 (269)
T cd03856           9 ANQIYDRRLALCESLQ---GNSCDLLTITSPPEGNDIKYEHLCSF----ANKKYIFLIARVHPGETNASWVMKGFLEFLL   81 (269)
T ss_pred             CCcCHHHHHHHHHHhc---CCceeEEEeccCCCCccccceeccCC----CCCcEEEEEcCcCCCchHHHHHHHHHHHHHH
Confidence            4568899999998886   77899999999999999999998753    5799999999999999999999999999999


Q ss_pred             HHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHH
Q psy8322         107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPE  186 (651)
Q Consensus       107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepE  186 (651)
                      .    .++.++.+|++++|+|||++||||+++.+        +|.||.|+||||||+              +|.++++||
T Consensus        82 ~----~~~~~~~ll~~~~~~ivP~~NPDG~~~g~--------~R~n~~G~DLNR~~~--------------~p~~~~~pE  135 (269)
T cd03856          82 S----DNPTAQSLRESFVFKIVPMLNPDGVIRGN--------YRCSLSGVDLNRQWQ--------------NPSPDLHPE  135 (269)
T ss_pred             h----CCHHHHHHHhcCeEEEEeeeCCccccccC--------CcCCCCCCCcCCCCC--------------CCCCCCCCC
Confidence            6    35669999999999999999999999764        589999999999997              688999999


Q ss_pred             HHHHHHHHHhC-----CcEEEEEEecCc---eeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccC-------Cccc
Q psy8322         187 VQAVIDWMNSV-----PFVMSLQLHGGN---VVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNI-------PTLV  251 (651)
Q Consensus       187 t~al~~~~~~~-----~~~~~i~~H~~~---~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~  251 (651)
                      ++++++++.++     ++.+++|+|+++   ++++  ||++...++    +......++++..... ++       +...
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~idlH~~~~~~~~f~--yG~~~~~~~----~~~~~~~~~~~~~~~~-~~~~~~~~~f~~~  208 (269)
T cd03856         136 IYLVKGLMLYLAAGKRGVLFYCDFHGHSRKKNVFM--YGCSFKDEV----WDQGYRIIPKMLSQNA-PLFCMFGCSFKVE  208 (269)
T ss_pred             HHHHHHHHHHHHhccCCceEEEEecCCCccCceEe--ecCCCchhh----hhhHHHHHHHHHHhhC-hhhhhcCCCcCCC
Confidence            99999999987     899999999999   6666  666543322    1222233444322121 22       2222


Q ss_pred             cccccccccchhhhccc---CCCCeEEEEEeeCc
Q psy8322         252 STSQSIDPEVQAVIDWM---NSVPFVMSLQLHGG  282 (651)
Q Consensus       252 ~~~~~~~~~~g~~~dw~---~~~p~~~t~el~g~  282 (651)
                      +... +|+++|++.+|+   .++|+++|+|+++.
T Consensus       209 ~~~~-~~~~~gtsr~~~~~~~~i~~syTlE~~~~  241 (269)
T cd03856         209 KSKA-SDPDRGTGRVVVAKQIKVQHSYTMEVTFN  241 (269)
T ss_pred             cCCc-ccCCCChHHHHHHHhcCCcEEEEEecCCC
Confidence            2233 789999999998   48999999999987

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M

>cd06228 Peptidase_M14-like_3 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=1.6e-34  Score=299.83  Aligned_cols=206  Identities=17%  Similarity=0.239  Sum_probs=159.2

Q ss_pred             EeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc---------
Q psy8322         278 QLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR---------  348 (651)
Q Consensus       278 el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~---------  348 (651)
                      |+++.    +|       |||+|++|+|+.+.  ...||+|+++|+||||||++++++++++++||..|..         
T Consensus         4 ~~~~~----S~-------EgR~I~~l~I~~~~--~~~kp~V~i~ggiHAREwis~~~~l~~i~~Ll~~y~~~~~~~yg~~   70 (332)
T cd06228           4 ELPHK----TY-------EGRTPHGAKIGAGT--LTSRYGALFIGGVHARERGSPDNLIYFVSDLLNARKAGRGIKYGGR   70 (332)
T ss_pred             CCCCC----CC-------CCCeeEEEEEeCCC--CCCCCEEEEEccccccchhhHHHHHHHHHHHHHhhhcccccccccc
Confidence            55665    77       99999999999864  3579999999999999999999999999999998752         


Q ss_pred             --CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC--------CceeEeeccCCCCCCC--------------
Q psy8322         349 --GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT--------PPFLISLFLPFPVTKN--------------  404 (651)
Q Consensus       349 --~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~--------~~~gvdlnrnf~~~~~--------------  404 (651)
                        .|+++++||+ ++|+|||++||||+++++..+|+|||+|.        +++||||||||++.|.              
T Consensus        71 ~~~d~~v~~lL~-~~i~IvP~vNPDGy~~s~~~~r~WRKNr~~~~~~~~~~c~GVDLNRNf~~~W~~~~~~~~~~~~~g~  149 (332)
T cd06228          71 TYTAADVKAILD-AGIVVFPLVNPDGRAHDQTANSCWRKNRNPASAGPNPSSVGVDINRNFDFLWDFQKYFDPGASRSVA  149 (332)
T ss_pred             ccccHHHHHHHh-CeEEEEEeecCcchhheeccchhhhccCCCCcccccCcccccccCCCCCCCcCcccccccccccCCC
Confidence              2788999999 99999999999999999999999999986        5789999999987664              


Q ss_pred             ------------CCCCCCChHHHHHHHHHhh--ccCCCCcC---------CCCCC-------------------------
Q psy8322         405 ------------KPALTPDTDVFLHLASTYA--RLHPTMHM---------KRPCP-------------------------  436 (651)
Q Consensus       405 ------------~~~~~~~~~~f~~l~~~~a--~~~~~~~~---------~~~~~-------------------------  436 (651)
                                  .+.++||+++++.+...+.  ..+..+|.         +..|.                         
T Consensus       150 S~~Pcse~Y~G~~pfSEPET~av~~~~~~~~~~~~yls~HSygq~il~P~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  229 (332)
T cd06228         150 STDPASETFHGTAAFSEPETRNVVWVMDTFKNIRWFVDLHSYGGDVLYSWGDDENQSTNPAMNFMNPAYDGKRGIVAAPD  229 (332)
T ss_pred             CCCCCccccCCCCCCccHHHHHHHHHHhccCCeEEEEEeccCCceEEecccCCccccccccccccccccccccccccccc
Confidence                        4578889999988877642  01111111         01110                         


Q ss_pred             ---------CC------------------ccccccCcceeccceEeccCcccchhhhc-------cceeEEEEEecc---
Q psy8322         437 ---------GN------------------TVLKFENGVTNGAAWYSFSGGMADYNYLY-------HGCLELTLEISC---  479 (651)
Q Consensus       437 ---------~~------------------~~~~~~~gi~n~~~~y~~sG~~~D~~y~~-------~~~~~~T~El~~---  479 (651)
                               .+                  .+..|..|..  ...||++|+++||+|..       +.+++|||||+.   
T Consensus       230 ~~~~~~~~~~~~~~l~~~a~~~~~ai~~~~g~~Y~~g~~--~~lY~~sG~s~D~ay~~~~~~~~~~~~~s~t~El~~~~~  307 (332)
T cd06228         230 TRYGEYIDSDDWDAAVNLAARMGLAMAAARGRIYTVSQS--VGLYPTSGASDDYAFSRHFADAVKRKVFSYTIEFGETNS  307 (332)
T ss_pred             cccccccCCCCHHHHHHHHHHHHHHHHHHhCCCceeCCc--ccccCCCCChhhhhhhccccccccCceEEEEEEeCCCCC
Confidence                     00                  0112233332  23599999999999974       578999999974   


Q ss_pred             ----cCCCCCCCcchhhhhchHHH
Q psy8322         480 ----CRYPAPSEIPIHWRSNQNAL  499 (651)
Q Consensus       480 ----~~~p~~~~i~~~w~~nr~al  499 (651)
                          +++||.++|..+-+|....+
T Consensus       308 ~~~~gF~~p~~~i~~~~~E~~~g~  331 (332)
T cd06228         308 EAECPFYPTYSEYNQIIKEVAAGL  331 (332)
T ss_pred             CCCcCCCCCHHHHHHHHHHHHHhh
Confidence                34588999998877766544

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=100.00  E-value=2.9e-32  Score=278.67  Aligned_cols=153  Identities=24%  Similarity=0.290  Sum_probs=139.7

Q ss_pred             CCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCC--CCCCCCeEEEEecccCCChhHHHHHHHHHHHH
Q psy8322          28 YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV--HQLGVPNVKIVGNIHGDEPIGREIILRLLEHL  105 (651)
Q Consensus        28 y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~--~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L  105 (651)
                      +.+|+||.+||++|++++|.+.++.+||+|+|||+|++++|+++..  ....||.|||.|||||+||+|+++++++++.|
T Consensus         2 ~t~y~e~~~~l~~La~~~~~i~~~~~iG~S~eGR~i~~l~is~~~~~~~~~~kp~V~i~~giHg~E~~g~~a~l~ll~~L   81 (268)
T cd06242           2 PTSHEEMESFMKSLASKNDWMSYHSDIGKSEEGRSIPYVYLSTSKSSSSSSKKLRVWLQGGVHGNEPAGDEAALALLGKL   81 (268)
T ss_pred             CCCHHHHHHHHHHHHHHCCCeEEEEECccccCCceeEEEEEecCCccccCCCCCEEEEECCcCCCCHHHHHHHHHHHHHH
Confidence            5789999999999999999988899999999999999999997642  24679999999999999999999999999999


Q ss_pred             HHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcH
Q psy8322         106 VVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDP  185 (651)
Q Consensus       106 ~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sep  185 (651)
                      +.+     +...++|++++|+|+|++||||+++..         |.||.|+||||||.                 ++++|
T Consensus        82 ~~~-----~~~~~lL~~~~i~ivP~~NPDG~~~~~---------R~na~g~DlNRD~~-----------------~~~~p  130 (268)
T cd06242          82 DNN-----PKWASVLEKIDIIVLPRYNPDGSAYFQ---------RTLATGYDPNRDHT-----------------KLARQ  130 (268)
T ss_pred             HhC-----chHHHHHhcCeEEEEeccCcchhhhcc---------ccCCcCcccCCCCC-----------------cccCH
Confidence            973     234589999999999999999999864         88999999999996                 58999


Q ss_pred             HHHHHHHHHHhCCcEEEEEEecCcee
Q psy8322         186 EVQAVIDWMNSVPFVMSLQLHGGNVV  211 (651)
Q Consensus       186 Et~al~~~~~~~~~~~~i~~H~~~~~  211 (651)
                      |++++++++.+++|.+++|+|.++..
T Consensus       131 Etra~~~~~~~~~P~v~iD~He~~~~  156 (268)
T cd06242         131 QTRDIKEAFSKFNPHIAIDAHEYGAF  156 (268)
T ss_pred             HHHHHHHHHHHhCCcEEEEeccCCcc
Confidence            99999999999999999999988775

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd03860 M14_CP_A-B_like The Peptidase M14 Carboxypeptidase (CP) A/B subfamily is one of two main M14 CP subfamilies defined by sequence and structural homology, the other being the N/E subfamily

Probab=100.00  E-value=1.3e-32  Score=286.99  Aligned_cols=219  Identities=23%  Similarity=0.271  Sum_probs=173.7

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..++++..|.    ++       |||+|++|+|++++  ...||+|+++|++|||||+|++++++++++|+.++  
T Consensus        16 ~~~p~~~~~~~iG~----S~-------egr~i~~l~i~~~~--~~~k~~v~i~~~~Hg~E~~g~~~~~~~~~~L~~~~--   80 (294)
T cd03860          16 QKYPDLVTVETIGR----SY-------EGRPIKGVKISNGG--RSNKPAIFIDAGIHAREWISPATALYIINQLVESY--   80 (294)
T ss_pred             HHCCCceEEEeeee----CC-------CCCeEEEEEEecCC--CCCCcEEEEECCcCcCccccHHHHHHHHHHHHHcc--
Confidence            35666777777787    77       99999999999874  45789999999999999999999999999999987  


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCCC----------------CCC
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTKN----------------KPA  407 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~~----------------~~~  407 (651)
                       ++.++.||++++|+|||++||||+++.+++++.|||+|.+     +.|||||||||+.|.                .+.
T Consensus        81 -~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~wrknr~~~~~~~~~GvDLNRnf~~~w~~~~~~~~p~~~~y~G~~~~  159 (294)
T cd03860          81 -DPEVTDLLDNYDWYILPVANPDGYEYTHTTDRLWRKNRSPNSGGGCVGVDLNRNFDYHWGGGGASSDPCSETYAGPSAF  159 (294)
T ss_pred             -CHHHHHHHHcCeEEEEeeecCCchhhhccccchhcccCCCCCCCCceeeccCCCCCCCCccCCCCCCCCCCCccCCCCC
Confidence             4789999999999999999999999999999999999875     589999999997653                345


Q ss_pred             CCCChHHHHHHHHHhh---ccCCCCcCCC-----C--CCCC----------------------ccccccCcceeccceEe
Q psy8322         408 LTPDTDVFLHLASTYA---RLHPTMHMKR-----P--CPGN----------------------TVLKFENGVTNGAAWYS  455 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a---~~~~~~~~~~-----~--~~~~----------------------~~~~~~~gi~n~~~~y~  455 (651)
                      ++||+++++.+..++.   .....+|...     +  +...                      ....+..|.. ...||+
T Consensus       160 sepEt~al~~~~~~~~~~~~~~ld~Hs~~~~i~~P~~~~~~~~~d~~~~~~la~~~~~~~~~~~g~~Y~~g~~-~~~~y~  238 (294)
T cd03860         160 SEPETRAVRDFLLSLRGRIKAYLSLHSYGQLILYPWGYTSELPPNYEDLREVAKAAADAIRAVYGTRYTVGSS-AETLYP  238 (294)
T ss_pred             chHHHHHHHHHHHhccccEEEEEEeccCCceEEcCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCccccc-cCcccc
Confidence            7889999999988773   1111222211     1  0000                      0112222322 235899


Q ss_pred             ccCcccchhhhcc-ceeEEEEEeccc----CCCCCCCcchhhhhchHHHHHHHH
Q psy8322         456 FSGGMADYNYLYH-GCLELTLEISCC----RYPAPSEIPIHWRSNQNALISWLQ  504 (651)
Q Consensus       456 ~sG~~~D~~y~~~-~~~~~T~El~~~----~~p~~~~i~~~w~~nr~all~~~a  504 (651)
                      ++|+++||+|... .+++||+||+|+    +.||.++|.++.+|++..+..++.
T Consensus       239 ~~G~~~Dw~y~~~~~~~~~t~El~~~~~~gf~~p~~~i~~~~~e~~~~~~~~~~  292 (294)
T cd03860         239 ASGGSDDWAYGVAGIPYSYTLELRDTGRYGFLLPASQIIPTAEETFAGIKAMAD  292 (294)
T ss_pred             CCCchhhhhhccCCCcEEEEEEecCCCCCCCcCChHHchhHHHHHHHHHHHHHh
Confidence            9999999999876 568999999874    458899999999999999988764

CPs hydrolyze single, C-terminal amino acids from polypeptide chains. They have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by a globular N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. There are nine members in the A/B family: CPA1, CPA2, CPA3, CPA4, CPA5, CPA6, CPB, CPO and CPU. CPA1, CPA2 and CPB are produced by the

>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.97  E-value=7.8e-32  Score=268.22  Aligned_cols=142  Identities=26%  Similarity=0.405  Sum_probs=129.6

Q ss_pred             HHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhh
Q psy8322          41 FTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLL  120 (651)
Q Consensus        41 l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll  120 (651)
                      +.+++|+.++++.||+|++||||++++|+++      ||.|++.|++||+||.|++++++|+++|+.+   .++.++.+|
T Consensus         2 ~~~~~p~~v~~~~iG~S~eGrpI~~l~ig~g------~~~vli~agiHG~E~~g~~all~ll~~L~~~---~~~~~~~ll   72 (231)
T cd06239           2 LLEKLPAKFKVEVIGKSVEGRPIYSVKFGSG------KIKILLWSQMHGNESTTTKALLDLLNFLGTS---KDQEAKKIL   72 (231)
T ss_pred             hHHHCCCeeEEEEeeECCCCCeEEEEEEcCC------CcEEEEEeccCCCCHHHHHHHHHHHHHHHHC---CCHHHHHHH
Confidence            4578999999999999999999999999974      6999999999999999999999999999983   456668999


Q ss_pred             cCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcE
Q psy8322         121 DNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFV  200 (651)
Q Consensus       121 ~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~  200 (651)
                      ++++|+|||++||||+++.+         |.|+.||||||||+                 +.++||+++++++++++++.
T Consensus        73 ~~~~v~iiP~lNPDG~~~~~---------R~N~~GvDLNRdf~-----------------~~s~PEtr~l~~~~~~~~pd  126 (231)
T cd06239          73 DEVTLVIIPMLNPDGAEAYT---------RVNANGVDLNRDAQ-----------------DLSQPESRLLRDVYDGFQPD  126 (231)
T ss_pred             hCCEEEEEeccCccHHHHcc---------cCCCcCCcCCCCCC-----------------CCChHHHHHHHHHHHhcCCE
Confidence            99999999999999999754         88999999999997                 47899999999999999999


Q ss_pred             EEEEEecCceeeeeccccc
Q psy8322         201 MSLQLHGGNVVASYPYDSF  219 (651)
Q Consensus       201 ~~i~~H~~~~~~~~P~~~~  219 (651)
                      +++|+|+++.+  |.++.+
T Consensus       127 ~~iDlH~~~~~--y~~~~~  143 (231)
T cd06239         127 FCFNLHDQRTI--YGVENT  143 (231)
T ss_pred             EEEEECCCCCc--cCCCCC
Confidence            99999999986  666554

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06229 M14_Endopeptidase_I Peptidase M14-like domain of Gamma-D-glutamyl-L-diamino acid endopeptidase 1 (also known as Gamma-D-glutamyl-meso-diaminopimelate peptidase I, and Endopeptidase I (ENP1); EC 3

Probab=99.97  E-value=1.4e-31  Score=273.47  Aligned_cols=193  Identities=22%  Similarity=0.294  Sum_probs=148.8

Q ss_pred             CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC----ChhhhhcccceeEEEEeccCcC
Q psy8322         296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG----DSNIRFLLDNTRIHLLPNLNPD  371 (651)
Q Consensus       296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~----d~~v~~ll~~~~~~i~P~~NpD  371 (651)
                      |||+|++++|++++      |.|+++|++|||||+|++++++++++||.+|..+    +..+++||++++|+|||++|||
T Consensus         3 eGR~I~~~~ig~~~------~~v~i~agiHarE~~~~~~~l~~i~~L~~~~~~~~~~~~~~~~~lL~~~~i~ivP~~NPD   76 (255)
T cd06229           3 LGRDIYEVKLGNGP------KTVFYNASFHAREWITTLLLMKFIEEYARAYENNEKLGGYDLRELLENVTICFVPMVNPD   76 (255)
T ss_pred             CCceeeEEEEcCCC------ceEEEECCccccchhhHHHHHHHHHHHHHHhccCccccchhHHHHHhcCeEEEEeCccCC
Confidence            89999999998643      9999999999999999999999999999998763    3468999999999999999999


Q ss_pred             Cceeeecc----------cccCCCCC-------CCceeEeeccCCCCCCC-----------------CCCCCCChHHHHH
Q psy8322         372 GSELAVEG----------NCRSGRGR-------TPPFLISLFLPFPVTKN-----------------KPALTPDTDVFLH  417 (651)
Q Consensus       372 G~~~~~~~----------~~~~~kgr-------~~~~gvdlnrnf~~~~~-----------------~~~~~~~~~~f~~  417 (651)
                      |+++++.+          +++|+++|       .|+.|||||||||+.|.                 .+.++||++++..
T Consensus        77 G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~s~~p~~~~y~G~~p~SEpEtral~~  156 (255)
T cd06229          77 GVEIVQNGPYAIRNYYLELLVINAGSINFKEWKANARGVDLNRNFPAGWEKEKAGPKAPAPRNYKGEQPLSEPETIALAE  156 (255)
T ss_pred             chheeeecccccccchhhhHHhhcCCCcccccccCCcccccCCCCCCCCCcCCCCCCCCCccCcCCCCCCCchhHHHHHH
Confidence            99999876          34566664       46799999999998764                 3468899999999


Q ss_pred             HHHHhh-ccCCCCcCCC-----CCCCC-------------ccccccCcceeccceEeccCcccchhhhccceeEEEEEec
Q psy8322         418 LASTYA-RLHPTMHMKR-----PCPGN-------------TVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEIS  478 (651)
Q Consensus       418 l~~~~a-~~~~~~~~~~-----~~~~~-------------~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~  478 (651)
                      +..++. .....+|...     ++...             ....+..+.  ... |+++|+++||+|...++++||+||+
T Consensus       157 ~~~~~~~~~~i~~Hs~g~~i~~~~~~~~~~~~~~~~~~~~~~~gy~~~~--~~~-~~~~G~~~Dw~~~~~gi~s~t~El~  233 (255)
T cd06229         157 LTRENRFRAVLAYHSQGEEIYWGYGGLEPPESQKMAELLAEVSGYELVD--SES-KRSYGGYKDWFIQKFRRPGFTIEIG  233 (255)
T ss_pred             HHHhCCCeEEEEecCCCCeEEecCCCCCchHHHHHHHHHhhccCCcccc--ccc-cCCCCCHHHHHHhhcCCeEEEEEeC
Confidence            887652 1111122110     00000             001122221  112 8999999999999878889999999


Q ss_pred             ccCCC-CCCCcchhhhhchH
Q psy8322         479 CCRYP-APSEIPIHWRSNQN  497 (651)
Q Consensus       479 ~~~~p-~~~~i~~~w~~nr~  497 (651)
                      .++-| |.++++.+|++|+.
T Consensus       234 ~~~~~~~~~~~~~~~~~~~~  253 (255)
T cd06229         234 RGTNPLPLSQFKTIYKENKG  253 (255)
T ss_pred             CCCCCCChHHhHHHHHhhcC
Confidence            87665 68999999999975

4.19.11). ENP1 is a member of the M14 family of metallocarboxypeptidases (MCPs). However it has an exceptional type of activity of hydrolyzing the gamma-D-Glu-(L)meso-diaminopimelic acid (gamma-D-Glu-Dap) bond of L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid and L-Ala-gamma-D-Glu-(L)meso-diaminopimelic acid(L)-D-Ala peptides. ENP1has a different substrate specificity and cellular role than MpaA (MpaA does not belong to this group). ENP1 hydrolyzes the gamma-D-Glu-Dap bond of MurNAc-tripeptide and MurNAc-tetrapeptide, as well as the amide bond of free tripeptide and tetrapeptide . ENP1 is active on spore cortex peptidoglycan, and is produced at stage IV of sporulation in forespore and spore integuments.

>PRK10602 murein peptide amidase A; Provisional

Probab=99.97  E-value=3e-31  Score=264.43  Aligned_cols=185  Identities=23%  Similarity=0.322  Sum_probs=144.7

Q ss_pred             EEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEE
Q psy8322          49 TELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLL  128 (651)
Q Consensus        49 ~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~ii  128 (651)
                      +...++|+|+|||||++++++..     +|+.++++||+||+||+|+++++++++.|..+             ...++||
T Consensus        15 ~~~~~iG~S~egrpi~~l~~~~~-----~~~~vli~agiHG~E~~g~~~~~~l~~~l~~~-------------~~~~~ii   76 (237)
T PRK10602         15 PGTEHYGRSLLGAPLLWFPAPAA-----SRESGLILAGTHGDETASVVTLSCALRTLTPS-------------LRRHHVV   76 (237)
T ss_pred             ccccccccccCCCceEEEEcCCC-----CCceEEEEecCCCCcHHHHHHHHHHHHhhhhh-------------ccceEEE
Confidence            46789999999999999999763     47899999999999999999999999988752             2357899


Q ss_pred             eccCcccccccccccccCCCCCCCccCcCCCCCCCc-ccCCCC------CCCCC-----CCCCCCCCcHHHHHHHHHHHh
Q psy8322         129 PNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPD-YFRHNR------SNIPT-----LVSTSQSIDPEVQAVIDWMNS  196 (651)
Q Consensus       129 P~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~-~w~~~~------s~~p~-----y~G~~~~sepEt~al~~~~~~  196 (651)
                      |++|||||++..         |.||+|||||||||. .|...+      +..||     |+|+.|+|||||+++.+++.+
T Consensus        77 pvvNPDG~~~~~---------R~n~~GvDLNRnFp~~~w~~~~~~~~w~~~~~~~~~~~y~G~~p~SepEt~al~~~i~~  147 (237)
T PRK10602         77 LAVNPDGCQLGL---------RANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHR  147 (237)
T ss_pred             EEECcccccccc---------ccCCCCCchhhcCCCcccccccccccccCCCCccchhhccCCCCCCCHHHHHHHHHHHH
Confidence            999999999764         789999999999997 686543      23455     899999999999999999999


Q ss_pred             CCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccchhhhccc--CCCCeE
Q psy8322         197 VPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWM--NSVPFV  274 (651)
Q Consensus       197 ~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dw~--~~~p~~  274 (651)
                      +++.+++++|+       ||.+...+     +..++.+.+.+       + +...-.....|+..|+..+|+  .++|. 
T Consensus       148 ~~~~~~~s~Hs-------P~~~~~~~-----~~~~~~~~la~-------a-f~~~~~~~~~y~~~Gs~~~~a~~~giP~-  206 (237)
T PRK10602        148 LQPAWVVSFHD-------PLACIEDP-----RHSELGEWLAQ-------A-FELPLVTSVGYETPGSFGSWCADLNLHC-  206 (237)
T ss_pred             cCCCEEEEeec-------cccccCCc-----cchHHHHHHHH-------H-hCCCeEeecCCCCCCcHHHHHHHcCCcE-
Confidence            99999999999       56553211     11111111111       1 111112356788889998998  58998 


Q ss_pred             EEEEeeC
Q psy8322         275 MSLQLHG  281 (651)
Q Consensus       275 ~t~el~g  281 (651)
                      +++|+++
T Consensus       207 it~El~~  213 (237)
T PRK10602        207 ITAELPP  213 (237)
T ss_pred             EEEecCC
Confidence            9999986

>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=99.97  E-value=1e-30  Score=266.41  Aligned_cols=206  Identities=18%  Similarity=0.270  Sum_probs=159.6

Q ss_pred             cCCcEEEEEeccccCCceEEEEEEcCCCC---CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhc
Q psy8322          45 YANMTELYSIGKSVLGKDLLVVNISTAPV---HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLD  121 (651)
Q Consensus        45 ~p~~~~~~~iG~S~egr~i~~v~i~~~~~---~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~  121 (651)
                      .+.++++.+||+|.+||+|++++|++...   ...+||.|+|.|++||+||+|+++++++++.|+.    .+++++.|++
T Consensus         9 ~~~~~~~~~iG~S~eGr~i~~l~i~~~~~~~~~~~~k~~V~i~a~iH~~E~~~s~~~~~ll~~Ll~----~~~~~~~Ll~   84 (258)
T cd06235           9 NNQYLKRKILCTTLGGLPVPLLTITSPSSKSIPIKKKKVIVITARQHPGETNSSFVMQGFIDFLLS----DSPEAQYLRE   84 (258)
T ss_pred             CCCceEEEEeEEcCCCCeeeEEEEeCCcccccccCCCcEEEEECCcCCCChHHHHHHHHHHHHHhc----CCHHHHHHHh
Confidence            56789999999999999999999997531   2357999999999999999999999999999986    3578999999


Q ss_pred             CceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC----
Q psy8322         122 NTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV----  197 (651)
Q Consensus       122 ~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~----  197 (651)
                      +++|+||||+||||+++..        .|.||.|+||||||..              |.++++||+++++++++++    
T Consensus        85 ~~~~~iiPm~NPDG~~~g~--------~R~n~~GvDLNR~w~~--------------p~~~~~PE~~~~~~~i~~~~~~~  142 (258)
T cd06235          85 NFIFKIIPMLNPDGVIHGN--------YRCSLSGIDLNRQWKN--------------PDKKLHPEIYHVKQLIKKLSQER  142 (258)
T ss_pred             ccEEEEEccccccceeecC--------CcCCCCCCCcCCCCCC--------------CCcccCcHHHHHHHHHHHHhccC
Confidence            9999999999999998754        5899999999999972              4579999999999999997    


Q ss_pred             CcEEEEEEecCcee-eeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccc---cccccccchhhhccc-CCCC
Q psy8322         198 PFVMSLQLHGGNVV-ASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVST---SQSIDPEVQAVIDWM-NSVP  272 (651)
Q Consensus       198 ~~~~~i~~H~~~~~-~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~dw~-~~~p  272 (651)
                      ++.+++|+||++.. -.|+|+.......   ..+...+.++++...... .+.+...   ...-.+.++.+.-|- .+++
T Consensus       143 ~~~~~iDlH~~s~~~~~F~yg~~~~~~~---~~~~~~~~~p~~~~~~~~-~f~~~~c~f~~~~~k~~tar~~~~~~~~~~  218 (258)
T cd06235         143 NIALFIDLHGHSRKKNSFMYGCSNSDDP---LNYYKERLFPKLLSKLCP-YFSFSSCSFKVQKDKEGTARVALWRELGIP  218 (258)
T ss_pred             CceEEEecccccccCCeeeecCCCCCcH---HHHHHHHHHHHHHHhhCc-ccCccccccCCCCCCCCcHHHHHHHHcCCc
Confidence            89999999998864 4578888754421   123455666766554432 2221111   122233344444444 4788


Q ss_pred             eEEEEEee
Q psy8322         273 FVMSLQLH  280 (651)
Q Consensus       273 ~~~t~el~  280 (651)
                      +++|+|..
T Consensus       219 ~syTlE~s  226 (258)
T cd06235         219 NSYTLETS  226 (258)
T ss_pred             eEEEEeee
Confidence            99998875

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc

>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.97  E-value=7.8e-31  Score=267.44  Aligned_cols=203  Identities=21%  Similarity=0.176  Sum_probs=150.5

Q ss_pred             eccccCCceEEEEEEcCCCC-----------------------CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhc
Q psy8322          54 IGKSVLGKDLLVVNISTAPV-----------------------HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYI  110 (651)
Q Consensus        54 iG~S~egr~i~~v~i~~~~~-----------------------~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~  110 (651)
                      +|+|.|||+|.++.|++...                       ....+|.|||.++|||+||+|++++++++++|+.   
T Consensus         1 ~G~s~egR~l~~~~I~s~~n~~~l~~~~~~~~~la~p~~~~~~~~~~~~~v~i~~~iH~~E~~g~~~~l~l~~~L~~---   77 (271)
T cd06238           1 YGRTHEGRPLLLATITSPENIARLDQIREDHLALADPAATSSLISDQPVVVWLGYSVHGNEISGTEAALLTAYHLAA---   77 (271)
T ss_pred             CCcCCCCCeeEEEEEeCHHHHHhHHHHHHHHHHhcCccccccccccCCcEEEEECCcCCCChHHHHHHHHHHHHHHH---
Confidence            69999999999999998631                       1236899999999999999999999999999998   


Q ss_pred             cCChhHHHhhcCceEEEEeccCcccccc-cc----------cccc--cC-----CCCCCCccCcCCCCCCCcccCCCCCC
Q psy8322         111 RGDSNIRFLLDNTRIHLLPNLNPDGSEL-AV----------EGNC--RS-----GRGRNNINNHDLNRQFPDYFRHNRSN  172 (651)
Q Consensus       111 ~~d~~~~~ll~~~~~~iiP~~NPDG~~~-~~----------~~~r--~~-----~~~r~n~~GvDLNRnf~~~w~~~~s~  172 (651)
                      +.++.++++|++++|+|+|++||||+++ +.          +.+|  |+     ..+|.||+|+||||||.         
T Consensus        78 ~~~~~~~~ll~~~~i~i~P~~NPDG~~r~~~w~~~~~~~~~~~d~~~r~~~~~wp~~R~n~~g~DLNRD~~---------  148 (271)
T cd06238          78 AQGDEIEALLDNAVVLIDPMQNPDGRDRFVNWYNSNRGMVPSADPQDREHNEPWPGGRTNHYWFDLNRDWL---------  148 (271)
T ss_pred             cCCHHHHHHHhcCEEEEEeccCCCHHHHHHHhhhhccCCccccchhhhhcccCCccccccccCcccccccc---------
Confidence            4688999999999999999999999995 32          2233  22     33689999999999997         


Q ss_pred             CCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCc---eeeeec---cccccCCCCCCCCchhhhhhhhHHHHhhcc-
Q psy8322         173 IPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGN---VVASYP---YDSFYGESKNNINNHDLNRQFPDYFRHNRS-  245 (651)
Q Consensus       173 ~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~---~~~~~P---~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  245 (651)
                              ++++|||+++.+++.+++|.+++|+|+++   .++++|   +++....++   .+.++...+.+......+ 
T Consensus       149 --------~~s~pEtra~~~~~~~~~p~~~~D~H~~g~~~~~~~~P~~~~~~np~~~p---~~~~~~~~~g~~~~~al~~  217 (271)
T cd06238         149 --------PLTQPESRGRLAAYHEWRPNVVVDFHEMGTNSTYFFAPGAPPRTNPLTPD---QNRDLTATIGRNHAKAFDE  217 (271)
T ss_pred             --------cccCHHHHHHHHHHHhcCCeEEEEeccCCCccceEEeCCCCccCCCCCCH---HHHHHHHHHHHHHHHHHHh
Confidence                    59999999999999999999999999976   677788   333211111   122222223222111111 


Q ss_pred             --cCCccccccccccccchhhhcccCCCCeEEEEEee
Q psy8322         246 --NIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH  280 (651)
Q Consensus       246 --~~~~~~~~~~~~~~~~g~~~dw~~~~p~~~t~el~  280 (651)
                        ..+..+...+.+||..|++..|..+..- +++|..
T Consensus       218 ~G~~Y~t~~~~d~~ypg~g~s~~~~~g~ig-~l~E~~  253 (271)
T cd06238         218 IGWLYFTREVFDDFYPGYGSTYPDLNGAIG-MLYEQA  253 (271)
T ss_pred             cCCcEEecccccccccCcCcchhhhcCcee-EEEEec
Confidence              1122334568899999999988865442 344443

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T

>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins

Probab=99.97  E-value=3.7e-30  Score=263.87  Aligned_cols=203  Identities=17%  Similarity=0.241  Sum_probs=162.4

Q ss_pred             cEEEEEeccccCCceEEEEEEcCCCCC----------------------CCCCCeEEEEecccCCChhHHHHHHHHHHHH
Q psy8322          48 MTELYSIGKSVLGKDLLVVNISTAPVH----------------------QLGVPNVKIVGNIHGDEPIGREIILRLLEHL  105 (651)
Q Consensus        48 ~~~~~~iG~S~egr~i~~v~i~~~~~~----------------------~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L  105 (651)
                      +++.+.+|+|.|||+|++|+|++....                      ..+||.|||.|++||+||.|++++++++++|
T Consensus        15 y~~~~~Lg~S~eGR~i~lLtITs~~~~~~~~~~~~~~l~~~~~~~~~~~~~~K~~V~I~ariHp~E~~~s~~~~~ll~~L   94 (304)
T cd06236          15 YYHREVLCYSLEGRRIDLLTITSCHGKLEQREPRLEGLFPDRKTPRPHFFFGKPVVFISSRVHPGETPSSFVFNGFLKFL   94 (304)
T ss_pred             EEEEEEeEECCCCCceEEEEEecCcccccccccccccccccccccccccccCCcEEEEECCcCCCCchHHHHHHHHHHHH
Confidence            578899999999999999999976421                      2579999999999999999999999999999


Q ss_pred             HHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcH
Q psy8322         106 VVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDP  185 (651)
Q Consensus       106 ~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sep  185 (651)
                      +.   ..|++++.|+++++|+||||+||||+++.+        .|.+|.|+||||+|-              ++.++++|
T Consensus        95 l~---~~d~~a~~L~~~~~~~IvPmlNPDGv~~g~--------~R~~~~G~DLNR~y~--------------~p~~~~~P  149 (304)
T cd06236          95 LN---KDDPRAALLRRRFVFKLIPMLNPDGVYRGH--------YRTDTRGVNLNRVYL--------------NPDPELHP  149 (304)
T ss_pred             Hh---CCCHHHHHHHhCCeEEEEEeEcccccccCc--------cccCCcCCCcCcCCC--------------CCCcccCH
Confidence            97   358899999999999999999999999866        589999999999985              78899999


Q ss_pred             HHHHHHHHHHhC----CcEEEEEEecCceeee-eccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcccccc------
Q psy8322         186 EVQAVIDWMNSV----PFVMSLQLHGGNVVAS-YPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTS------  254 (651)
Q Consensus       186 Et~al~~~~~~~----~~~~~i~~H~~~~~~~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------  254 (651)
                      |++++++++..+    ++.++||+||.+.... |+||......    ......+.++++...+... +.+.+..      
T Consensus       150 ei~aik~~i~~~~~~~~i~~yiDlH~hs~~~~~F~Yg~~~~~~----~~~~~~~~fp~l~~~~~~~-F~~~~c~F~~~~m  224 (304)
T cd06236         150 SIYAIKKLILYLHEESRLAFYIDLHAHASKRGCFIYGNALEDE----SQQVENLLFPKLISLNSPH-FDFDGCNFSEKNM  224 (304)
T ss_pred             HHHHHHHHHHHhhccCCceEEEEecccccccceEeeecCCChH----HHHHHHHHHHHHHHhcCcc-cccccceeccccc
Confidence            999999999875    5999999999988765 8999864321    1122345677776666432 2222111      


Q ss_pred             -------ccccccchhhhccc-CCCCeEEEEEee
Q psy8322         255 -------QSIDPEVQAVIDWM-NSVPFVMSLQLH  280 (651)
Q Consensus       255 -------~~~~~~~g~~~dw~-~~~p~~~t~el~  280 (651)
                             +.-...++.+.=|- .+++++||+|.-
T Consensus       225 ~~~d~~~~~~k~gt~Rv~~~~~~~i~~syTlE~s  258 (304)
T cd06236         225 YAKDKRDGLSKEGSGRVAVYKATGIIHSYTLECN  258 (304)
T ss_pred             cccccccccCcCCcchhhHhhhhCCceEEEEEEe
Confidence                   12344577777776 588999988874

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal

>cd06227 Peptidase_M14-like_2 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.97  E-value=1.8e-30  Score=265.57  Aligned_cols=194  Identities=21%  Similarity=0.234  Sum_probs=146.0

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|. .+....|.    ++       |||+|++|+|+.+......||.|+++||+|||||+|++++++++++|+.+|...
T Consensus        19 ~~p~-~~~~~ig~----S~-------egr~i~~i~~~~~~~~~~~k~~i~i~agiHarE~i~~~~~l~li~~L~~~~~~~   86 (272)
T cd06227          19 NIRL-SRLGELIE----SV-------KVRNFSSITLNPNGDPSKKKVKALLLFGEHARELISPETGLHLLSNLCGELAET   86 (272)
T ss_pred             HCCC-cEEeeeee----cc-------CCceeeEEEecCCCCCCCCCCEEEEECCccCCchhhHHHHHHHHHHHHHhcccc
Confidence            5565 44444555    77       999999999997642224699999999999999999999999999999998642


Q ss_pred             ---ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCC--------------CCCCCCCh
Q psy8322         350 ---DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKN--------------KPALTPDT  412 (651)
Q Consensus       350 ---d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~--------------~~~~~~~~  412 (651)
                         ++.+++||++++|+|||++||||+++.+.+++.||+++   .|||||||||+.|.              .+.++||+
T Consensus        87 ~~~~~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~wR~N~---~GVDLNRNf~~~w~~~~~~~~~~~y~G~~~~sEpEt  163 (272)
T cd06227          87 FDWGDLLKNILDNFDLKIIPNENPDGRKKVESGNYCLRENE---NGVDLNRNYGADWGFKEDDYEDEEYSGPAPFSEPET  163 (272)
T ss_pred             cchhHHHHHHHhcCcEEEEeccCCchheeEeccCcccccCC---ccccccccCCcccccCCCCccccccCCCCCCCcHHH
Confidence               37899999999999999999999999999999998877   69999999987653              34568999


Q ss_pred             HHHHHHHHHhh-ccCCCCcC------------CCCC-CCC-------------ccccccCcceeccceEeccCcccchhh
Q psy8322         413 DVFLHLASTYA-RLHPTMHM------------KRPC-PGN-------------TVLKFENGVTNGAAWYSFSGGMADYNY  465 (651)
Q Consensus       413 ~~f~~l~~~~a-~~~~~~~~------------~~~~-~~~-------------~~~~~~~gi~n~~~~y~~sG~~~D~~y  465 (651)
                      +++..+..++. .....+|.            ...+ +..             ....+..|.......|+++|+++||+|
T Consensus       164 ~av~~~~~~~~~~~~i~~Hs~~~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~y~~G~~~~~~~Y~a~G~s~Dway  243 (272)
T cd06227         164 RVLRDLLTSFSPDVFLSVHSGTLALFTPYAYKKEQPEPNLAEDMRILLLISNKHCPRCQVGSAGKLVGYLAHGTSMDYMY  243 (272)
T ss_pred             HHHHHHHHhCCCeEEEEeccCCCEEEecCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCceecCccceeecCCCCHHHHHh
Confidence            99999988752 01111111            0111 000             111233333332234999999999999


Q ss_pred             hc-cceeEEEEEec
Q psy8322         466 LY-HGCLELTLEIS  478 (651)
Q Consensus       466 ~~-~~~~~~T~El~  478 (651)
                      .. +++++||+||+
T Consensus       244 ~~~gip~s~t~EL~  257 (272)
T cd06227         244 DVLKVPYSFTFEIY  257 (272)
T ss_pred             hcCCCcEEEEEEcc
Confidence            75 66789999998

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>smart00631 Zn_pept Zn_pept

Probab=99.97  E-value=1.8e-30  Score=269.02  Aligned_cols=205  Identities=30%  Similarity=0.379  Sum_probs=161.1

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..++.+..|.    ++       |||+|++++|++++  ...||.|+++|++||+||+|++++++++++|+.+|.. 
T Consensus        17 ~~~~~v~~~~iG~----S~-------~Gr~i~~~~i~~~~--~~~k~~v~i~a~~Hg~E~~g~~~~~~~i~~L~~~~~~-   82 (277)
T smart00631       17 RYPDLVRLVSIGK----SV-------EGRPIWVLKISDGG--SHNKPAIFIDAGIHAREWIGPATALYLINQLLENYGR-   82 (277)
T ss_pred             HCCCceEEEecee----cC-------CCCceEEEEEeCCC--CCCCcEEEEECCccccccccHHHHHHHHHHHHHhccc-
Confidence            5566677777777    77       99999999999864  3469999999999999999999999999999999977 


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC---CceeEeeccCCCCCC-------------CCCCCCCChH
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT---PPFLISLFLPFPVTK-------------NKPALTPDTD  413 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~---~~~gvdlnrnf~~~~-------------~~~~~~~~~~  413 (651)
                      |+.++.||++++|+|||++||||+++.+.+++.||++|.   +..|||||||||+.|             ..+.++||++
T Consensus        83 ~~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~wr~~r~~~~~~~GvDLNRnf~~~w~~~~~p~~~~y~G~~~~sepEt~  162 (277)
T smart00631       83 DPRITKLLDKTDIYIVPVLNPDGYEYTHTGDRLWRKNRSPNSNCRGVDLNRNFPFHWGKTGNPCSETYAGPSPFSEPETK  162 (277)
T ss_pred             CHHHHHHHHcCcEEEEEeecCchhhheecccccccCCCCCCCCCcCcccCCCCCCCCCCCCCCCCCCcCCCCCCCcHHHH
Confidence            899999999999999999999999999999999999998   899999999999754             2346799999


Q ss_pred             HHHHHHHHhh--ccCCCCcCC---------CCCCCC---------------------ccccccCcceeccceEeccCccc
Q psy8322         414 VFLHLASTYA--RLHPTMHMK---------RPCPGN---------------------TVLKFENGVTNGAAWYSFSGGMA  461 (651)
Q Consensus       414 ~f~~l~~~~a--~~~~~~~~~---------~~~~~~---------------------~~~~~~~gi~n~~~~y~~sG~~~  461 (651)
                      ++..+..++.  .....+|..         ..+...                     ....+..|...+. +|+++|+++
T Consensus       163 ai~~~~~~~~~~~~~id~Hs~~~~i~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~y~~g~~~~~-~y~~~G~~~  241 (277)
T smart00631      163 AVRDFIRSNRRFVLYIDLHSYSQLILYPYGYTKNDLPPNVDDLDAVAKALAKALASVHGTRYTYGISNGA-IYPASGGSD  241 (277)
T ss_pred             HHHHHHHhcCCeeEEEEeccCCcEEEecCcCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCccccccccCc-ccCCCCchh
Confidence            9999888762  111122221         011100                     0111344555555 488999999


Q ss_pred             chhhhccc-eeEEEEEecccC---C-CCCCCcc
Q psy8322         462 DYNYLYHG-CLELTLEISCCR---Y-PAPSEIP  489 (651)
Q Consensus       462 D~~y~~~~-~~~~T~El~~~~---~-p~~~~i~  489 (651)
                      ||+|...+ ++++|+||++++   | +|.+++.
T Consensus       242 D~~~~~~gi~~~~t~El~~~~~~~~~~p~~~~~  274 (277)
T smart00631      242 DWAYGTLGIPFSFTLELRDDGRYGFLLPPSQII  274 (277)
T ss_pred             hhhhccCCCcEEEEEEecCCCCCCccCCHHHcc
Confidence            99998755 799999999875   4 3445444

>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins

Probab=99.97  E-value=1.2e-29  Score=254.73  Aligned_cols=207  Identities=16%  Similarity=0.261  Sum_probs=160.3

Q ss_pred             cCCcEEEEEeccccCCceEEEEEEcCCCC---CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhc
Q psy8322          45 YANMTELYSIGKSVLGKDLLVVNISTAPV---HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLD  121 (651)
Q Consensus        45 ~p~~~~~~~iG~S~egr~i~~v~i~~~~~---~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~  121 (651)
                      .+.++++++||+|.|||+|++|+|++...   ....||.|||+|++|++|+.|..++..+++.|+.    .++.++.|++
T Consensus        10 ~~~~~~~~~lg~S~eGR~i~~LtIt~~~~~~~~~~~K~~I~I~ariHp~E~~~s~~~~gll~~L~~----~~~~a~~Lr~   85 (261)
T cd06907          10 RSKFCKLRVLCRTLAGNTVYLLTITSPSSNPSLAAAKKAVVLTARVHPGETNASWMMKGFLDFLTS----NSPDAQLLRD   85 (261)
T ss_pred             cCCceEEEEEEECCCCCeeeEEEEcCCCccccccCCCCEEEEECCcCCChHHHHHHHHHHHHHHhc----CCHHHHHHHh
Confidence            34689999999999999999999997531   2357999999999999999999999999999984    5889999999


Q ss_pred             CceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh----C
Q psy8322         122 NTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNS----V  197 (651)
Q Consensus       122 ~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~----~  197 (651)
                      +++|+||||+||||+++.+        .|.+|.|+||||||..              +.+.+.||+.+++++++.    .
T Consensus        86 ~~~f~IvPmlNPDGv~~G~--------~R~~~~G~DLNR~w~~--------------p~~~~~P~i~~~k~li~~l~~~~  143 (261)
T cd06907          86 TFIFKIVPMLNPDGVIVGN--------YRCSLAGRDLNRNYKT--------------PLKDSFPTIWYTKNMVKRLLEER  143 (261)
T ss_pred             cCCEEEEEeecCccccccC--------CcCCCcCCCCCcCCCC--------------CCcccCchHHHHHHHHHHHHhcC
Confidence            9999999999999999876        6899999999999974              336788998888877654    3


Q ss_pred             CcEEEEEEecCceeee-eccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccc---cccccccchhhhcccCCCCe
Q psy8322         198 PFVMSLQLHGGNVVAS-YPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVST---SQSIDPEVQAVIDWMNSVPF  273 (651)
Q Consensus       198 ~~~~~i~~H~~~~~~~-~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~g~~~dw~~~~p~  273 (651)
                      ++.+++|+||.++... ||||+.....+   ....-.+.+|++...+....+.+.+.   .+.-...|+.+.=|.....+
T Consensus       144 ~i~~ylDlHghs~~~~~F~yG~~~~~~~---~~~~~~~~fp~l~~~~~~~~F~~~~c~F~~~~~k~~t~Rv~~~~~~~~~  220 (261)
T cd06907         144 EVILYCDLHGHSRKNNVFMYGCENKLNP---EKWLHERVFPLMMSKNAPDKFSFRSCKFKVQKSKEGTGRVVMWRLGILN  220 (261)
T ss_pred             CeEEEEEeccchhccceEeecCCCCCCH---HHHHHHHHHHHHHHhcCccceecccCCccCCCCCCCCceEEhhhhcCce
Confidence            6999999999999844 99999754421   12223467787777665433333222   23334456666667654558


Q ss_pred             EEEEEee
Q psy8322         274 VMSLQLH  280 (651)
Q Consensus       274 ~~t~el~  280 (651)
                      ++|+|.-
T Consensus       221 syTlE~s  227 (261)
T cd06907         221 SFTMEAT  227 (261)
T ss_pred             EEEEeeE
Confidence            8888764

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N

>cd06905 Peptidase_M14-like_8 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.97  E-value=3.7e-30  Score=271.99  Aligned_cols=200  Identities=24%  Similarity=0.277  Sum_probs=152.8

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      +.+|..++++..|.    ||       |||+|++|+||++. .....||+||++|+||||||+|++++++++++|+++|+
T Consensus        19 ~~~P~lv~l~~IG~----S~-------EGR~I~~l~Is~~~~~~~~~Kp~I~i~~giHarEwig~~~~l~li~~Ll~~y~   87 (360)
T cd06905          19 SAYPQLCSLESIGK----SY-------EGRDIWLLTLTNQATGPDREKPAFWIDANIHATEVTGSAVALYVIQTLLNGYG   87 (360)
T ss_pred             HHCCCceEEEEeee----cC-------CCCceEEEEecCCCCCCCCCCcEEEEecCCCCCchHHHHHHHHHHHHHHHhcc
Confidence            46788888888888    88       99999999998764 33457999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeec-ccccCCCCCCCc------------------------------------
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVE-GNCRSGRGRTPP------------------------------------  390 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~-~~~~~~kgr~~~------------------------------------  390 (651)
                      + |++++.||++++|+|||++||||+++++. ++++|||+|.+.                                    
T Consensus        88 ~-d~~i~~lLd~~~~~IvP~vNPDG~e~~~~~~~r~wRk~r~~~~~~~~~~g~~~~D~n~D~~~~~mr~~d~~g~w~~~~  166 (360)
T cd06905          88 S-DPEVTRLLDGYTFYILPRLNPDGAEQALTHPPYVRRSSRRPYPYPDRIDGLYPEDIDGDGLILQMRVKDPCGAWKVSE  166 (360)
T ss_pred             C-CHHHHHHHhcCeEEEEeeeCCChheEEeeccccccccCCCCcccccccccccccccCccchhheeecccccccccccc
Confidence            7 89999999999999999999999999999 999999887521                                    


Q ss_pred             -----------------------------------------eeEeeccCCCCCC----------CCCCCCCChHHHHHHH
Q psy8322         391 -----------------------------------------FLISLFLPFPVTK----------NKPALTPDTDVFLHLA  419 (651)
Q Consensus       391 -----------------------------------------~gvdlnrnf~~~~----------~~~~~~~~~~~f~~l~  419 (651)
                                                               .|||||||||+.|          ..+.++||+.++..+.
T Consensus       167 ~~p~~m~~~~~~~~~g~~y~~~~eg~~~~~dg~~~~~~~~~~GvDlNRNf~~~W~~~~~~~y~G~~p~SEpEt~av~~~~  246 (360)
T cd06905         167 RDPRIMVRREPDEFGGTYYRLLPEGLIRNYDGYNIKIAPPLEGLDFNRNFPHDWRPEGEQYGAGPFPFSEPETRAVVEFW  246 (360)
T ss_pred             ccchhhccccccccCceeeeecccccccccccccccccccccCCCcccCcCCCCCCCCCcCCCCCCCCChHHHHHHHHHH
Confidence                                                     4999999999776          2457899999998887


Q ss_pred             HHhhc--cCCCCcC---------CCCCCCC--cc---------ccc--cCc--ceeccce------EeccCcccchhhhc
Q psy8322         420 STYAR--LHPTMHM---------KRPCPGN--TV---------LKF--ENG--VTNGAAW------YSFSGGMADYNYLY  467 (651)
Q Consensus       420 ~~~a~--~~~~~~~---------~~~~~~~--~~---------~~~--~~g--i~n~~~~------y~~sG~~~D~~y~~  467 (651)
                      .+..+  .+..+|.         +..|...  ..         ...  ..|  ..++..-      ++++|+++||+|..
T Consensus       247 ~~~~~i~~~is~Hsyg~~il~P~g~~~~~~~~~~~~~~~~~la~~~~~~~~y~~~~~~~~~~~~~~~~~~G~~~Dw~y~~  326 (360)
T cd06905         247 TDHPNINGFISYHTYSGVILRPYSDKPDDQMPVDDLELYKALGEKGEELTGYPTVSVYHEFRYHPKEVTYGAFDDWAYDH  326 (360)
T ss_pred             hcCCCeEEEEEecCCcCeeeeCCCCCcCcCCChhhHHHHHHHHHHHHHhcCccccccccceecCCcccccCChhhhhhhc
Confidence            65421  1112222         1111110  00         000  000  0111001      38999999999998


Q ss_pred             cceeEEEEEeccc
Q psy8322         468 HGCLELTLEISCC  480 (651)
Q Consensus       468 ~~~~~~T~El~~~  480 (651)
                      .++++||+||+..
T Consensus       327 ~gi~s~t~EL~~~  339 (360)
T cd06905         327 LGIFAFTVELWDL  339 (360)
T ss_pred             CCeEEEEEEcCCC
Confidence            7779999999853

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.96  E-value=5.5e-29  Score=254.29  Aligned_cols=163  Identities=28%  Similarity=0.324  Sum_probs=139.4

Q ss_pred             HHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCC------CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHh
Q psy8322          36 EELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV------HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEY  109 (651)
Q Consensus        36 ~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~------~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~  109 (651)
                      +||++|++++| .+++.+||+|.|||+|++++|+.+..      ...+||.|||.|||||+||.|.+++++|++.|+.+.
T Consensus         1 a~~~~La~~~~-~v~~~~iG~S~eGR~i~~l~is~~~~~~~~~~~~~~kp~v~i~agiH~~E~~G~~a~~~ll~~L~~~~   79 (266)
T cd06241           1 AFLERLAAASP-LIRLESFGKTPEGRPLHLLVLSKDGAFTPEEAKRSGKPVVLVQAGIHAGEIDGKDAGLMLLRDLADGK   79 (266)
T ss_pred             CHHHHHHHhCC-ceEEEEeEeCCCCCeeEEEEEecCCccchhhhcccCCCEEEEeCCcCCCCchHHHHHHHHHHHHHhcc
Confidence            47999999996 58999999999999999999997541      125799999999999999999999999999999742


Q ss_pred             ccCChhHHHhhcCceEEEEeccCcccccccccccc---cC---CCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCC
Q psy8322         110 IRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC---RS---GRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSI  183 (651)
Q Consensus       110 ~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r---~~---~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~s  183 (651)
                         .   ..+|++++|+|||++||||+++.....|   +.   ...|.|++|+||||||+                 ..+
T Consensus        80 ---~---~~ll~~~~i~ivP~~NpDG~~~~~~~~r~~q~gp~~~~~R~na~g~DLNRdf~-----------------~~~  136 (266)
T cd06241          80 ---K---DALLDKVVLVFIPVFNVDGHERRSPYNRTNQNGPEEYGWRGNARNLNLNRDFI-----------------KLD  136 (266)
T ss_pred             ---h---HHHHhCCEEEEEeCCCccHHHhcccccccccCCCCccCceecccceecCCCCc-----------------ccC
Confidence               2   2899999999999999999998765444   11   23689999999999998                 368


Q ss_pred             cHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCC
Q psy8322         184 DPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGES  223 (651)
Q Consensus       184 epEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~  223 (651)
                      +||+|++.+++.+++|.++||+|+.+. ..|+|+.+...+
T Consensus       137 ~pEtra~~~~~~~~~p~~~iD~H~~~g-~~~~yd~t~~~~  175 (266)
T cd06241         137 APEMRAFAKLFNKWNPDLFIDNHVTDG-ADYQYDLTYDFT  175 (266)
T ss_pred             CHHHHHHHHHHHHhCCCEEEEeccCCC-cCceeeeccccc
Confidence            999999999999999999999998765 378888776554

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd03863 M14_CPD_II The second carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=99.96  E-value=2.3e-29  Score=268.02  Aligned_cols=142  Identities=35%  Similarity=0.593  Sum_probs=128.9

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      ..+|..+++...|.    |+       |||+|++|+||+++ .+.++||+|+++|+||||||+|++++++|+++||++|+
T Consensus        21 ~~~P~i~~l~~IG~----S~-------eGR~I~~l~Is~~~~~~~~~kp~v~~~g~iHg~E~ig~~~~l~li~~L~~~y~   89 (375)
T cd03863          21 NEYPSITRLYSVGK----SV-------ELRELYVMEISDNPGIHEPGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNFG   89 (375)
T ss_pred             HHCCCcEEEEEccc----CC-------ccceEEEEEEecCCCcccCCCCeEEEEccccCCcHHHHHHHHHHHHHHHHhcc
Confidence            46788888888888    88       99999999999876 45568999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCC--CCCCCChHHHHHHHHHh
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNK--PALTPDTDVFLHLASTY  422 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~--~~~~~~~~~f~~l~~~~  422 (651)
                      + |+++++||++++|||||++||||++++++++|.|+++|.|+.|||||||||+.|..  ..++||+.+++.+..++
T Consensus        90 ~-d~~v~~ll~~~~i~IvP~~NPDG~e~~~~~~~~~~~~R~n~~GVDLNRNfp~~~~~~~~~~EpEt~Av~~~~~~~  165 (375)
T cd03863          90 T-DPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQVTDPPQPETLAVMSWLKSY  165 (375)
T ss_pred             C-CHHHHHHHhCCEEEEEeccCCchHHheecCCcccccccccCCCcccccCCccccccCCCCCcHHHHHHHHHHhhC
Confidence            6 99999999999999999999999999999999999999999999999999988743  34688999988887765

4.17.22), domain II. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, while the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally ac

>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity

Probab=99.96  E-value=3.7e-28  Score=239.35  Aligned_cols=117  Identities=37%  Similarity=0.602  Sum_probs=105.2

Q ss_pred             EEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccc-cccccccCCCCCCCccCcCCC
Q psy8322          81 VKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL-AVEGNCRSGRGRNNINNHDLN  159 (651)
Q Consensus        81 v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~-~~~~~r~~~~~r~n~~GvDLN  159 (651)
                      |+|+|++||+|++|+++++++++.|+..+   + ..+.++++.+|+|||++||||+++ .+         |.|..|+|||
T Consensus         1 v~i~ag~Hg~E~~g~~~~~~~~~~l~~~~---~-~~~~l~~~~~i~iiP~~NPdG~~~~~~---------R~n~~g~DlN   67 (196)
T cd00596           1 VLIIAGIHGNETIGVEAALALLRRLLSNY---G-RDTKLLENGRLLVVPVLNPDGYEAVNW---------RKNANGVDLN   67 (196)
T ss_pred             CEEECCcCCCcHHHHHHHHHHHHHHHHcC---c-chHHHHhCCeEEEEeCcccccceeeeE---------EeCCCCcCcc
Confidence            68999999999999999999999999854   2 228999999999999999999998 44         7888899999


Q ss_pred             CCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccC
Q psy8322         160 RQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYG  221 (651)
Q Consensus       160 Rnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~  221 (651)
                      ||||..|..           .++++||++++.+++.++++.+++|+|+++..++|||++...
T Consensus        68 R~f~~~~~~-----------~~~~~~e~~~~~~~~~~~~~~~~idlH~~~~~~~~p~~~~~~  118 (196)
T cd00596          68 RNFPGLWGK-----------GPLSEPETRALAELIQQRKVDLYIDLHSGSLGVLYPYSHSDT  118 (196)
T ss_pred             CCCCCcccC-----------CCCCcHHHHHHHHHHHhCCceEEEEEecCCceEEecCCCCCC
Confidence            999987753           478999999999999999999999999999999999999643

Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring

>cd03869 M14_CPX_like Peptidase M14-like domain of carboxypeptidase (CP)-like protein X (CPX), CPX forms a distinct subgroup of the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.95  E-value=8.1e-29  Score=263.78  Aligned_cols=143  Identities=33%  Similarity=0.560  Sum_probs=125.6

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      +.+|...++...|.    ||       |||+|++|+||+++ .+..+||+|+++|+||||||+|++++++++++||++|.
T Consensus        20 ~~yP~i~~l~sIGk----S~-------EGR~L~~l~Is~~~~~~~~~kP~v~~~g~iHgrE~ig~~~~l~li~~L~~~y~   88 (405)
T cd03869          20 EMCPNITRIYNIGK----SY-------QGLKLYAMEISDNPGEHELGEPEFRYVAGMHGNEVLGRELLLLLMQFLCQEYL   88 (405)
T ss_pred             HHCCCceEEEEeEE----Cc-------CCceEEEEEEecCCccccCCCCeEEEEcccCCCcHHHHHHHHHHHHHHHHhhh
Confidence            46788888888888    88       99999999999876 44568999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecc---cccCCCCCCCceeEeeccCCCC----CCC----------------
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG---NCRSGRGRTPPFLISLFLPFPV----TKN----------------  404 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~---~~~~~kgr~~~~gvdlnrnf~~----~~~----------------  404 (651)
                      .+|+++++||++++|||||++||||+++++++   ++.|||||.|+.|||||||||.    .|.                
T Consensus        89 ~~d~~v~~Ll~~~~i~IvP~~NPDG~e~s~~~~~~~~~Wrk~R~na~GVDLNRNFp~~~~~~W~~~~~~~~~~~~~~~~~  168 (405)
T cd03869          89 AGNPRVVHLVEETRIHLLPSMNPDGYEKAYEAGSELGGWALGRWTEEGIDINHNFPDLNTILWEAEDKKKVPRKVPNHHI  168 (405)
T ss_pred             cCCHHHHHHHhcCeEEEEeeeCCchhhhhhhcCccccccccCccCCCCccccCCCcccccccccccccccccccccccCC
Confidence            66999999999999999999999999999886   4789999999999999999993    221                


Q ss_pred             ---------CCCCCCChHHHHHHHHHh
Q psy8322         405 ---------KPALTPDTDVFLHLASTY  422 (651)
Q Consensus       405 ---------~~~~~~~~~~f~~l~~~~  422 (651)
                               ...++||+.+++.+..++
T Consensus       169 Pc~~~Y~G~~~~sEPET~Av~~~i~~~  195 (405)
T cd03869         169 PIPEWYLSENATVAPETRAVIAWMEKI  195 (405)
T ss_pred             CCccccCCCCCCCcHHHHHHHHHHHhC
Confidence                     234678888888777764

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Proteins belonging to this subgroup include CP-like protein X1 (CPX1), CP-like protein X2 (CPX2), and aortic CP-like protein (ACLP) and its isoform adipocyte enhancer binding protein-1 (AEBP1). AEBP1 is a truncated form of ACLP, which may arise from alternative splicing of the gene. These proteins are inactive towards standard CP substrates because they lack one or more critical active site and substrate-binding residues that are necessary for activity. They may function as binding proteins rather than as active CPs or display catalytic activity toward other substrates. Pro

>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.95  E-value=4e-28  Score=242.69  Aligned_cols=126  Identities=32%  Similarity=0.451  Sum_probs=116.2

Q ss_pred             eccccCCceEEEEEEcCCCCC----CCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEe
Q psy8322          54 IGKSVLGKDLLVVNISTAPVH----QLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLP  129 (651)
Q Consensus        54 iG~S~egr~i~~v~i~~~~~~----~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP  129 (651)
                      ||+|+|||||++++|+++...    ...||.|++.+++||+||+|+++++.+++.|+.   +.+++++.+|++++|+|+|
T Consensus         1 iG~S~eGRpi~~l~i~~~~~~~~~~~~~~p~v~i~~giHG~E~~G~~a~l~ll~~L~~---~~~~~~~~lL~~~~i~ivP   77 (236)
T cd06243           1 IGTSQRGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPAGREALLIIARDLAF---GEDEELVPLLHQTTVLFVP   77 (236)
T ss_pred             CccCCCCCeeEEEEEecCCCccccccCCCCEEEEECCcCCCChHHHHHHHHHHHHHHh---cCCHHHHHHHhcceEEEEe
Confidence            699999999999999986521    247899999999999999999999999999987   5688899999999999999


Q ss_pred             ccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecC
Q psy8322         130 NLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGG  208 (651)
Q Consensus       130 ~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~  208 (651)
                      ++||||+++.         +|.||.|+||||||+                 ++++||++++.+++.+++|.+++|+|++
T Consensus        78 ~~NPDG~~~~---------~R~n~~g~DlNRd~~-----------------~~~~pEt~al~~~~~~~~p~~~iDlHe~  130 (236)
T cd06243          78 TANPDGREAD---------TRSNADGIDINRDHL-----------------LLNTPEAQALASVLRDYRPDVVVDAHEY  130 (236)
T ss_pred             CcCccHhhcC---------CcCCCCCcccCCCCC-----------------CCCCHHHHHHHHHHHhcCCEEEEEeCCC
Confidence            9999999975         489999999999998                 4789999999999999999999999998

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.95  E-value=3.2e-27  Score=237.39  Aligned_cols=135  Identities=30%  Similarity=0.313  Sum_probs=119.2

Q ss_pred             eccccCCceEEEEEEcCCCC---------------------------CCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322          54 IGKSVLGKDLLVVNISTAPV---------------------------HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV  106 (651)
Q Consensus        54 iG~S~egr~i~~v~i~~~~~---------------------------~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~  106 (651)
                      ||+|.|||+|+++.|++.+.                           ....|+.|++++++||+|++|+++++.++++|+
T Consensus         1 iGkS~eGR~l~~~~Is~~~a~ld~~~~~~~~l~l~dp~~~~~~~~~~~~~~~k~v~~~~~iHg~E~~g~~a~l~ll~~L~   80 (268)
T cd06244           1 AGKSAEGRDIPVVVVAKPEAAVDKYENETLPLMLENPPELADKIEDGTIEDYKPPIINNNIHPDETPGIDAQTELIEELA   80 (268)
T ss_pred             CCcCCCCCeeEEEEEeCcHHHHHHHHHHhhhhhhcCcccchhhhccccccccCeEEEEeCcCCCCHHHHHHHHHHHHHHH
Confidence            79999999999999998740                           013577888889999999999999999999999


Q ss_pred             HHhccC--------------ChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCC
Q psy8322         107 VEYIRG--------------DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSN  172 (651)
Q Consensus       107 ~~~~~~--------------d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~  172 (651)
                      .++ ..              ++++++||+++.|+|+|++||||+++..         |.||+|+||||||..        
T Consensus        81 ~~~-~~~~~~~~~~~~~~~~~~~i~~lL~~~~i~i~P~~NPDG~~~~~---------R~Na~G~DLNRD~~~--------  142 (268)
T cd06244          81 QED-EIEFNTTDADGNEVTETLDVDDLLEKVIFLFNVTENPDGRVAGT---------RENANGFDLNRDNSF--------  142 (268)
T ss_pred             hcc-cccccccccccccccCCHHHHHHHhcCEEEEEecccCCcceeee---------ecCCCccccCCCCCc--------
Confidence            864 21              8899999999999999999999999754         899999999999973        


Q ss_pred             CCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCc-eeeeec
Q psy8322         173 IPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGN-VVASYP  215 (651)
Q Consensus       173 ~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~-~~~~~P  215 (651)
                               .++|||+++++++.+++|.+++|+||+. .+++.|
T Consensus       143 ---------~sqpEt~av~~~~~~w~P~~~~dlHg~~~~~~~~P  177 (268)
T cd06244         143 ---------QTQPETQAIVALIAEWNPASFLDLHGYVEGFLIEP  177 (268)
T ss_pred             ---------ccCHHHHHHHHHHHHhCCeEEEEeCCCCCceEEcC
Confidence                     6899999999999999999999999987 555558

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd03867 M14_CPZ Peptidase M14-like domain of carboxypeptidase (CP) Z (CPZ), CPZ belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.94  E-value=1.6e-27  Score=257.04  Aligned_cols=143  Identities=35%  Similarity=0.606  Sum_probs=125.8

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      ..+|..+++...|.    +|       |||+|++|+||+++ .+...||+|+++||||||||+|++++++++++||++|.
T Consensus        16 ~~~p~~~~~~~iG~----S~-------EGR~i~~l~is~~~~~~~~~kp~v~i~~giHg~E~ig~~~~~~l~~~L~~~~~   84 (395)
T cd03867          16 ARCSHIARTYSIGR----SF-------EGRDLLVIEFSSNPGQHELLEPEVKYIGNMHGNEVLGRELLIYLAQFLCSEYL   84 (395)
T ss_pred             HhCCCceEEEEccc----cC-------CCceEEEEEeccCCCcccccCCeEEEEccccCCcHHHHHHHHHHHHHHHHhhh
Confidence            36788888888888    88       99999999999866 44557999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeeccc---ccCCCCCCCceeEeeccCCCCCCCC-------------------
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGN---CRSGRGRTPPFLISLFLPFPVTKNK-------------------  405 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~---~~~~kgr~~~~gvdlnrnf~~~~~~-------------------  405 (651)
                      .+|+++++||++++|||||++||||++++++++   +.||++|.|+.|||||||||+.+..                   
T Consensus        85 ~~d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~~~wr~~R~n~~GvDLNRNf~~~~~~~~~~~~~~g~~~~~~p~p~  164 (395)
T cd03867          85 LGNQRIQTLINTTRIHLLPSMNPDGYEAAASEGAGYNGWTNGRQNAQNIDLNRNFPDLTSEVYRRRRQRGARTDHIPIPD  164 (395)
T ss_pred             cCCHHHHHHhhCcEEEEEeccCCchHHhhhhcCccccccccCCcCCCCcccccCCCcchhhhcchhhcccccccCCCCcc
Confidence            669999999999999999999999999999877   5799999999999999999975421                   


Q ss_pred             ----CCCCCChHHHHHHHHHh
Q psy8322         406 ----PALTPDTDVFLHLASTY  422 (651)
Q Consensus       406 ----~~~~~~~~~f~~l~~~~  422 (651)
                          ..++||+++++.+..++
T Consensus       165 ~~~~~~sepEt~Av~~~~~~~  185 (395)
T cd03867         165 SYWFGKVAPETKAVMKWMRSI  185 (395)
T ss_pred             ccccCccCHHHHHHHHHHhhC
Confidence                12578899988887764

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPZ is a secreted Zn-dependent enzyme whose biological function is largely unknown. Unlike other members of the N/E subfamily, CPZ has a bipartite structure, which consists of an N-terminal cysteine-rich domain (CRD) whose sequence is similar to Wnt-binding proteins, and a C-terminal CP catalytic domain that removes C-terminal Arg residues from substrates. CPZ is enriched in the extracellular matrix and is widely distributed during early embryogenesis. That the CRD of CPZ can bind to Wnt4 suggests that CPZ plays a role in Wnt signaling.

>cd03868 M14_CPD_I The first carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=99.94  E-value=2.2e-27  Score=255.19  Aligned_cols=142  Identities=32%  Similarity=0.528  Sum_probs=129.1

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      +.+|..+++...|.    ++       |||+|++|+||+++ .....||+|+++|+||||||+|++++++|+++||++|.
T Consensus        16 ~~~p~~~~l~~iG~----S~-------eGR~i~~l~is~~~~~~~~~kp~v~~~~~iH~~E~ig~~~~l~l~~~L~~~y~   84 (372)
T cd03868          16 KKYPNIARLHSIGR----SV-------EGRELWVLRITDNVNRREPGEPMFKYVGNMHGDETVGRQVLIYLAQYLLENYG   84 (372)
T ss_pred             HHCCCcEEEEeccc----cC-------CCceEEEEEEecCCCCCCCCCCeEEEECCcCCCcHHHHHHHHHHHHHHHHhcc
Confidence            46788888888888    88       99999999999876 34567999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeeccc--ccCCCCCCCceeEeeccCCCCCCC-----CCCCCCChHHHHHHHH
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGN--CRSGRGRTPPFLISLFLPFPVTKN-----KPALTPDTDVFLHLAS  420 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~--~~~~kgr~~~~gvdlnrnf~~~~~-----~~~~~~~~~~f~~l~~  420 (651)
                      . |+++++||++++|+|||++||||++++++++  ++|+++|.|+.|||||||||+.|.     ...++||+.++..+..
T Consensus        85 ~-d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~~~~~~~R~n~~GvDLNRnf~~~~~~~~~~~~~sepEt~av~~~~~  163 (372)
T cd03868          85 G-DERVTELVNTTDIYLMPSMNPDGFERSQEGDCSCGGYGGRENANNVDLNRNFPDQFEGKLQRLSERQPETVAMMKWIR  163 (372)
T ss_pred             c-CHHHHHHHhCCEEEEEeeeCCchHHhhcccCccccCCCccCCCCCccCCCCCCcccCCcCCCCCCCCHHHHHHHHHHh
Confidence            5 9999999999999999999999999999998  789999999999999999998875     3568899999998887


Q ss_pred             Hh
Q psy8322         421 TY  422 (651)
Q Consensus       421 ~~  422 (651)
                      ++
T Consensus       164 ~~  165 (372)
T cd03868         164 SN  165 (372)
T ss_pred             hC
Confidence            65

4.17.22), domain I. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active at p

>cd06245 M14_CPD_III The third carboxypeptidase (CP)-like domain of Carboxypeptidase D (CPD; EC 3

Probab=99.94  E-value=3e-27  Score=251.37  Aligned_cols=142  Identities=31%  Similarity=0.530  Sum_probs=127.3

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      ..+|..+++...|.    |+       |||+|++|+||+++ .+.++||+|+++|+||||||+|++++++++++||++|+
T Consensus        17 ~~~p~i~~l~~IG~----S~-------eGR~l~~l~Is~~~~~~~~~kp~v~~~~giHg~E~ig~e~~l~l~~~L~~~y~   85 (363)
T cd06245          17 LNYPHITNLTSLGQ----SV-------EFRPILSLEISNKPNNSEPEEPKIRFVAGIHGNAPVGTELLLALAEFLCMNYG   85 (363)
T ss_pred             HHCCCceEEEEeee----cC-------CCceEEEEEecCCCCCCCCCCCEEEEECCccCCcHHHHHHHHHHHHHHHHHcc
Confidence            36788888888888    88       99999999999876 45678999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCC--CCCCCCCCChHHHHHHHHHh
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVT--KNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~--~~~~~~~~~~~~f~~l~~~~  422 (651)
                      + |+.+++||++++|||||++||||+++++++++.+..+|.|+.|||||||||++  +..+.++||+++++.+..+.
T Consensus        86 ~-d~~v~~ll~~~~i~ivP~~NPDG~e~~~~~~~~~~~~r~na~GvDLNRNf~~~~~g~~~~sepEt~Av~~~~~~~  161 (363)
T cd06245          86 K-NPAVTKLIDRTRIVIVPSLNPDGREKAQEKQCTSKEGHTNAHGKDLDTDFTSNASNMSADVQPETKAIIDNLISK  161 (363)
T ss_pred             C-CHHHHHHHhCCEEEEEeccCCchHHHeecCCCcccCCCCCcccccCCCCCCcccCCCCCCCcHHHHHHHHHHHhC
Confidence            6 89999999999999999999999999999997766789999999999999954  45667899999999887753

4.17.22), domain III. CPD differs from all other metallocarboxypeptidases in that it contains multiple CP-like domains. CPD belongs to the N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPD is a single-chain protein containing a signal peptide, three tandem repeats of CP-like domains separated by short bridge regions, followed by a transmembrane domain, and a C-terminal cytosolic tail. The first two CP-like domains of CPD contain all of the essential active site and substrate-binding residues, the third CP-like domain lacks critical residues necessary for enzymatic activity and is inactive towards standard CP substrates. Domain I is optimally active a

>cd03866 M14_CPM Peptidase M14 Carboxypeptidase (CP) M (CPM) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.94  E-value=3.1e-27  Score=252.73  Aligned_cols=141  Identities=34%  Similarity=0.586  Sum_probs=126.2

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      ..+|...+++..|.    ++       |||+|++|+||+++ .+...+|.|+++|+||||||+|++++++++++||++|.
T Consensus        20 ~~~p~i~~l~~IG~----S~-------eGR~i~~l~ig~~~~~~~~~~P~v~~~~~iHg~E~ig~~~~l~l~~~L~~~y~   88 (376)
T cd03866          20 KNYPSITHLHSIGQ----SV-------EGRELWVLVLGRFPREHRIGIPEFKYVANMHGNEVVGRELLLHLIDYLVTSYG   88 (376)
T ss_pred             HhCCCcEEEEEeec----cC-------CCceEEEEEeccCCccccCCCCeEEEEcccCCCcHHHHHHHHHHHHHHHHhcC
Confidence            36788888888888    88       99999999999865 34567999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCC--CCCCCChHHHHHHHHHh
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNK--PALTPDTDVFLHLASTY  422 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~--~~~~~~~~~f~~l~~~~  422 (651)
                      + |+++++||++++|||||++||||++++. .+|.|+++|.|+.|||||||||+.|..  ..++||.++++.+..+.
T Consensus        89 ~-d~~i~~lL~~~~i~ivP~~NPDG~e~~~-~~~~~~~~R~N~~GvDLNRnf~~~w~~~~~~sepEt~al~~~~~~~  163 (376)
T cd03866          89 S-DPVITRLLNSTRIHIMPSMNPDGFEASK-PDCYYSVGRYNKNGYDLNRNFPDAFEENNEQRQPETRAVMEWLKSE  163 (376)
T ss_pred             C-CHHHHHHHhCCEEEEEeccCCchhhhcc-cccccccccccCCCcccCcCchhhhccCCCCCcHHHHHHHHHHHhc
Confidence            7 8999999999999999999999999995 799999999999999999999987642  34789999988887654

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPM is an extracellular glycoprotein, bound to cell membranes via a glycosyl-phosphatidylinositol on the C-terminus of the protein. It specifically removes C-terminal basic residues such as lysine and arginine from peptides and proteins. The highest levels of CPM have been found in human lung and placenta, but significant amounts are present in kidney, blood vessels, intestine, brain, and peripheral nerves. CPM has also been found in soluble form in various body fluids, including amniotic fluid, seminal plasma and urine. Due to its wide distribution in a variety of tissues, it is believed that it plays an important role in the cont

>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.94  E-value=6.4e-26  Score=227.49  Aligned_cols=135  Identities=37%  Similarity=0.500  Sum_probs=117.3

Q ss_pred             eccccCCceEEEEEEcCCCC------CCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEE
Q psy8322          54 IGKSVLGKDLLVVNISTAPV------HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHL  127 (651)
Q Consensus        54 iG~S~egr~i~~v~i~~~~~------~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~i  127 (651)
                      ||+|+|||||++++|++...      ...+||.|++.||+||+|+.|+++++.|++.|+.+    +...+.+|++++|+|
T Consensus         1 iG~S~eGRpi~~~~i~~~~~~~~~~~~~~~k~~v~i~~giHg~E~~g~~a~~~l~~~l~~~----~~~~~~ll~~~~i~i   76 (226)
T cd03857           1 IGKSVEGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESAGSDALLELLRQLASA----SDEEAKMLENIVIVL   76 (226)
T ss_pred             CccCCCCCeEEEEEEeCCccccccccccCCCcEEEEECCcCCCCchHHHHHHHHHHHHHhC----CHHHHHHHhCCEEEE
Confidence            69999999999999998542      23479999999999999999999999999999862    445689999999999


Q ss_pred             EeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEec
Q psy8322         128 LPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHG  207 (651)
Q Consensus       128 iP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~  207 (651)
                      ||++||||+++.+         |.|++|+||||||+.                 .++||++++.+++.+++|.+++|+|+
T Consensus        77 vP~~NPDG~~~~~---------R~n~~g~DLNRd~~~-----------------~~~pEt~~~~~~~~~~~p~~~iDlH~  130 (226)
T cd03857          77 IPRANPDGAALFT---------RENANGLDLNRDFLK-----------------LTQPETRAVREVFIEWKPQFFIDLHE  130 (226)
T ss_pred             EeccCCChHHhcc---------ccCCCcccCCCCCCC-----------------cCCHHHHHHHHHHHHcCCeEEEEcCC
Confidence            9999999999864         899999999999983                 68999999999999999999999999


Q ss_pred             Cceeeeecccc
Q psy8322         208 GNVVASYPYDS  218 (651)
Q Consensus       208 ~~~~~~~P~~~  218 (651)
                      +..-..++|..
T Consensus       131 ~~~g~~~~~~~  141 (226)
T cd03857         131 YGFGAVSFYDP  141 (226)
T ss_pred             CCCcceecCCC
Confidence            93223444443

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>cd03865 M14_CPE_H Peptidase M14 Carboxypeptidase (CP) E (CPE, also known as carboxypeptidase H, and enkephalin convertase; EC 3

Probab=99.94  E-value=5.8e-27  Score=249.76  Aligned_cols=143  Identities=36%  Similarity=0.598  Sum_probs=124.2

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      ..+|..+++...|.    ||       |||+|++|+||+++ .+.++||.|+++|+||||||+|++++++++++||.+|.
T Consensus        20 ~~~p~i~~l~~IG~----S~-------eGR~I~~l~Is~~~~~~~~~kP~v~i~g~iHg~E~ig~~~~l~l~~~L~~~y~   88 (402)
T cd03865          20 LQCPSISRIYTVGR----SF-------EGRELLVIEMSDNPGEHEPGEPEFKYIGNMHGNEAVGRELLIYLAQYLCNEYQ   88 (402)
T ss_pred             HHCCCceEEEeccc----cc-------CCCeEEEEEeecCCCCCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHHhcc
Confidence            46788888888888    88       99999999999876 45668999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecc---cccCCCCCCCceeEeeccCCCCCCC--------------------
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG---NCRSGRGRTPPFLISLFLPFPVTKN--------------------  404 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~---~~~~~kgr~~~~gvdlnrnf~~~~~--------------------  404 (651)
                      .+|+++++||++++|||||++||||++++.++   .+.|++||.|+.|||||||||....                    
T Consensus        89 ~~d~~v~~LLd~~~i~IvP~~NPDG~e~~~~~~~~~~~w~~~R~Na~GvDLNRNFp~~~~~~~~~~~~~~~~~~~~~~~~  168 (402)
T cd03865          89 KGNETIINLIHSTRIHIMPSLNPDGFEKAASQPGELKDWFVGRSNAQGIDLNRNFPDLDRIVYVNEREGGPNNHLLKNMK  168 (402)
T ss_pred             cCCHHHHHHHhcCEEEEEeeeCCchHHhhhhcCccccchhhhcccccCcccCCCCCcccchhhhhhccCCCccccccccc
Confidence            66899999999999999999999999998652   3679999999999999999995310                    


Q ss_pred             -----CCCCCCChHHHHHHHHHh
Q psy8322         405 -----KPALTPDTDVFLHLASTY  422 (651)
Q Consensus       405 -----~~~~~~~~~~f~~l~~~~  422 (651)
                           .....||+.+++....++
T Consensus       169 ~~~~~~~~~~pEt~Avm~w~~~~  191 (402)
T cd03865         169 KAVDENTKLAPETKAVIHWIMDI  191 (402)
T ss_pred             cccccccCCChHHHHHHHHHHhC
Confidence                 113468888888877766

4.17.10) belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPE is an important enzyme responsible for the proteolytic processing of prohormone intermediates (such as pro-insulin, pro-opiomelanocortin, or pro-gonadotropin-releasing hormone) by specifically removing C-terminal basic residues. In addition, it has been proposed that the regulated secretory pathway (RSP) of the nervous and endocrine systems utilizes membrane-bound CPE as a sorting receptor. A naturally occurring point mutation in CPE reduces the stability of the enzyme and causes its degradation, leading to an accumulation of numerous neuroendocrine pe

>cd03859 M14_CPT Peptidase M14-like domain of carboxypeptidase (CP) T (CPT), CPT belongs to the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.94  E-value=1.8e-26  Score=240.61  Aligned_cols=217  Identities=24%  Similarity=0.321  Sum_probs=175.5

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..++++..|.    ++       |||+|++|+|++++.....||.|+++|++|||||+|++++++++++||.+|..
T Consensus        19 ~~~p~~v~~~~iG~----S~-------eGR~i~~l~i~~~~~~~~~kp~i~i~~~iH~~E~~g~~~~l~~i~~L~~~~~~   87 (295)
T cd03859          19 AAYPNLTKVKSIGK----SY-------EGRDIIAVKISDNVATDENKPEVLYTSTHHAREWLSLEMAIYLMHYLLENYGK   87 (295)
T ss_pred             HHCCCceEEEeeee----cC-------CCCeEEEEEEecCCCCCCCCCEEEEECCcCccchhhHHHHHHHHHHHHHhhcc
Confidence            46788888888888    88       99999999999876445679999999999999999999999999999999977


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeec--ccccCCCCCC-------CceeEeeccCCCCCCCC--------------
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVE--GNCRSGRGRT-------PPFLISLFLPFPVTKNK--------------  405 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~--~~~~~~kgr~-------~~~gvdlnrnf~~~~~~--------------  405 (651)
                       |+.+++||++++|+|||++||||++++++  .++.|||+|.       ++.|||||||||+.|..              
T Consensus        88 -d~~~~~lL~~~~i~ivP~~NPDG~~~~~~~~~~~~wrkn~~~~~~~~~~~~GvDLNRNf~~~w~~~~~g~s~~p~~~~y  166 (295)
T cd03859          88 -DPRIQNLVDNRELWFVPVVNPDGYEYDETTGGYRSWRKNRRDNSGDISSSDGVDLNRNYGYKWGYDSGGSSNDPSSETY  166 (295)
T ss_pred             -CHHHHHHHhcCeEEEEeeeCCCcceEEeeccCccceeccCCCCCCCcCcceeecCCCCCCcccCCCCCCCCCCCCCCCc
Confidence             89999999999999999999999999998  8999999974       56899999999976542              


Q ss_pred             ----CCCCCChHHHHHHHHHhh--ccCCCCcCC--------CC-------CCCC---------cc--ccccCcceeccce
Q psy8322         406 ----PALTPDTDVFLHLASTYA--RLHPTMHMK--------RP-------CPGN---------TV--LKFENGVTNGAAW  453 (651)
Q Consensus       406 ----~~~~~~~~~f~~l~~~~a--~~~~~~~~~--------~~-------~~~~---------~~--~~~~~gi~n~~~~  453 (651)
                          +.++||+++++.+..++.  .....+|..        +.       +.+.         ..  ..+..|.  ...|
T Consensus       167 ~G~~p~sepEt~av~~~~~~~~~~~~~l~~Hs~g~~i~~P~~~~~~~~~~~~d~~~~~~la~~~~~~~~y~~~~--~~~~  244 (295)
T cd03859         167 RGPSAFSEPETQAIRDFVESHKNIKTALNYHTYSNLWLYPYGYQYNEPMPSKDEIDFVALGGTMAESNGYTPKV--SSDL  244 (295)
T ss_pred             cCCCCCchHHHHHHHHHHHhCCCeEEEEEeecCCceEEeCCcCCCCCCCCCccHHHHHHHHHHHHHHhCCcccC--ccee
Confidence                456789999999888762  111111110        00       1110         00  0122333  3458


Q ss_pred             EeccCcccchhhhccceeEEEEEecc-----cCCCCCCCcchhhhhchHHH
Q psy8322         454 YSFSGGMADYNYLYHGCLELTLEISC-----CRYPAPSEIPIHWRSNQNAL  499 (651)
Q Consensus       454 y~~sG~~~D~~y~~~~~~~~T~El~~-----~~~p~~~~i~~~w~~nr~al  499 (651)
                      |+++|+++||+|...++++||+||++     +++||.++|.++|++|++++
T Consensus       245 Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~~~gf~~p~~~i~~~~~~~~~~~  295 (295)
T cd03859         245 YTANGDADDWMYGRHKIISLTPEMGPESGGTGFYPPDEEISRETSRNYPAL  295 (295)
T ss_pred             EecCCchHHHHhhCCCcEEEEEEeCCCCCCCCCcCCHHHHHHHHHhccCCC
Confidence            99999999999999889999999998     34799999999999998753

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT has moderate similarity to CPA and CPB, and exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues like CPA and C-terminal positively charged residues like CPB. CPA and CPB are M14 family peptidases but do not belong to this CPT group. The substrate specificity difference between CPT and CPA and CPB is ascribed to a few amino acid substitutions at the substrate-binding pocket while the spatial organization of the binding site remains the same as in all Zn-CPs. CPT has increased thermal stability in presence of Ca2+ ions, and two disulfide bridges which give an additional stabilization factor.

>cd03858 M14_CP_N-E_like Carboxypeptidase (CP) N/E-like subfamily of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.93  E-value=3.4e-26  Score=246.79  Aligned_cols=143  Identities=39%  Similarity=0.629  Sum_probs=129.5

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCc-cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPV-HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~-~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      ..+|..++++..|.    ++       |||+|++|+|++++. ....||.|+++|++|||||+|++++++|+++|+.+|.
T Consensus        16 ~~~p~~~~~~~iG~----S~-------eGR~i~~l~i~~~~~~~~~~kp~v~i~agiH~~E~~g~~~~~~l~~~L~~~~~   84 (374)
T cd03858          16 ANYPNITRLYSIGK----SV-------QGRDLWVLEISDNPGVHEPGEPEFKYVGNMHGNEVVGRELLLRLAQYLCENYG   84 (374)
T ss_pred             HhCCCceEEEEccc----CC-------CCCEEEEEEEecCCCCCCCCCceEEEeccccCCchhHHHHHHHHHHHHHHHhc
Confidence            46788888888888    88       999999999998763 3457999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCC-------CCCCCCChHHHHHHHH
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKN-------KPALTPDTDVFLHLAS  420 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~-------~~~~~~~~~~f~~l~~  420 (651)
                      ..|+.+++||++++|+|||++||||+++.++++|.|+++|.|+.|||||||||+.|.       .+.++||.+++..+..
T Consensus        85 ~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~w~~~R~n~~GvDLNRnf~~~~~~~~~~G~~~~sepEt~al~~~~~  164 (374)
T cd03858          85 AGDPRITRLVDNTRIHIMPSMNPDGYEKAAEGDCGGLTGRYNANGVDLNRNFPDLFFTNYRSSDNGPRQPETKAVMNWIK  164 (374)
T ss_pred             cCCHHHHHHHhCCEEEEEcccCCchhhhhcccCCcccccCCCCcceecccCCCcccccccccCCCcccCHHHHHHHHHHh
Confidence            458999999999999999999999999999999999999999999999999998764       3468999999998887


Q ss_pred             Hh
Q psy8322         421 TY  422 (651)
Q Consensus       421 ~~  422 (651)
                      ++
T Consensus       165 ~~  166 (374)
T cd03858         165 SI  166 (374)
T ss_pred             hC
Confidence            65

The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. The N/E subfamily includes eight members, of which five (CPN, CPE, CPM, CPD, CPZ) are considered enzymatically active, while the other three are non-active (CPX1, PCX2, ACLP/AEBP1) and lack the critical active site and substrate-binding residues considered necessary for CP activity. These non-active members may function as binding proteins or display catalytic activity towards other substrates. Unlike the A/B CP subfamily, enzymes belonging to the N/E subfamily are not produced as inactive precursors that require proteolysis to produce the active form; rather, they rely on their substrate specificity and subcellular compartmentalization to prevent inappr

>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=99.93  E-value=7.3e-25  Score=220.80  Aligned_cols=217  Identities=17%  Similarity=0.266  Sum_probs=156.6

Q ss_pred             HHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCC--------CCCCCeEEEEecccCCChhHHHHHHHHHHHHHHH
Q psy8322          37 ELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVH--------QLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVE  108 (651)
Q Consensus        37 ~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~--------~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~  108 (651)
                      .|+......+.+++...+++|.+||++++|+|++.+..        ...||.|||.|++|++|..|..++..+++.|+. 
T Consensus         3 ~l~~~~~~~~~y~~~~~Lc~Tl~G~~v~lltIt~~~~~~~~~~~~~~~~kp~I~I~ARvHPgEt~~Swi~~g~l~~L~~-   81 (278)
T cd06906           3 KLESLHDPQQIYFRQQVLCETLGGNSCPLLTITAMPESNYYEHICQFRNRPYIFLSARVHPGETNASWVMKGTLEFLMS-   81 (278)
T ss_pred             hHhhhcCCcccEEeeecceeccCCCceeEEEEeCCCccccccccccccCCcEEEEEcccCCCcchHHHHHHHHHHHHhC-
Confidence            34455555567889999999999999999999985421        147999999999999999999999999998874 


Q ss_pred             hccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHH--
Q psy8322         109 YIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPE--  186 (651)
Q Consensus       109 ~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepE--  186 (651)
                         .|+.++.|+++++|+||||+||||+.+.+        .|.|..|+||||||..              +.|-..||  
T Consensus        82 ---~d~~a~~Lr~~~~f~IvPmlNPDGvv~Gn--------~Rc~~~G~DLNR~w~~--------------p~~~~~P~i~  136 (278)
T cd06906          82 ---SSPTAQSLRESYIFKIVPMLNPDGVINGN--------HRCSLSGEDLNRQWQS--------------PNPELHPTIY  136 (278)
T ss_pred             ---CCHHHHHHHHhCcEEEEeeecCccceecc--------cccCCCCCCCCCCCCC--------------CCcccChHHH
Confidence               58999999999999999999999999765        6888899999999972              34455565  


Q ss_pred             -HHHHHHHHHhC--CcEEEEEEecCcee-eeeccccccCCCCCC---------CCchhhhhhhhHHHHhhcccCCccccc
Q psy8322         187 -VQAVIDWMNSV--PFVMSLQLHGGNVV-ASYPYDSFYGESKNN---------INNHDLNRQFPDYFRHNRSNIPTLVST  253 (651)
Q Consensus       187 -t~al~~~~~~~--~~~~~i~~H~~~~~-~~~P~~~~~~~~~~~---------~~~~~~~~~~~~~~~~~~~~~~~~~~~  253 (651)
                       +++|.+++.+.  .+.+++|+||++.. -.|=||......+..         .......+.+|++...+.. .+.+.+.
T Consensus       137 ~~k~l~~~l~~~~~~~~~yiDlHghs~~~~~F~yG~~~~~~~~~~~~~~~~~~~~~~~~~~~fP~ll~~~~~-~Fs~~~C  215 (278)
T cd06906         137 HTKGLLQYLAAIKRSPLVYCDYHGHSRKKNVFMYGCSIKETVWHTNVNSASCDLVEDSGYRTLPKILSHIAP-AFSMSSC  215 (278)
T ss_pred             HHHHHHHHHHHhCCCceEEEeecccccccceEEeccCCCcchhhhhccccccccchhhhHHHHHHHHHhcCC-ccchhhC
Confidence             66666777654  58899999987764 334444432221100         0011234567777766543 2322222


Q ss_pred             ---cccccccchhhhccc-CCCCeEEEEEee
Q psy8322         254 ---SQSIDPEVQAVIDWM-NSVPFVMSLQLH  280 (651)
Q Consensus       254 ---~~~~~~~~g~~~dw~-~~~p~~~t~el~  280 (651)
                         .+.-...|+.+.=|- .+++++||+|.-
T Consensus       216 ~F~~~k~K~gTaRv~~~~~~~i~~syTlE~S  246 (278)
T cd06906         216 SFVVEKSKESTARVVVWREIGVQRSYTMEST  246 (278)
T ss_pred             CccCCCCCCCCeeEehhhhcCCceEEEEEEE
Confidence               233445567777777 488988888863

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna

>cd06226 M14_CPT_like Peptidase M14-like domain of an uncharacterized group of Peptidase M14 Carboxypeptidase (CP) T (CPT)-like proteins

Probab=99.93  E-value=1e-25  Score=232.75  Aligned_cols=221  Identities=24%  Similarity=0.336  Sum_probs=170.4

Q ss_pred             CeEEEEEeeCceecccC--CCcccCCCCcceEEEEeeCCCc--cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         272 PFVMSLQLHGGNVVASY--PYDSFYGESKDLLVVNISTAPV--HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       272 p~~~t~el~g~~l~~~y--~~~~~~gegr~i~~l~is~~~~--~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      |..+++...|.    +|  +--.   |||+|++|+|+++..  ....||.|+++|+||||||+|++++++++++|+.+|.
T Consensus         2 p~~~~~~~iG~----S~~~~~~~---eGR~I~~l~ig~~~~~~~~~~kp~v~i~~~iHarE~ig~~~~l~~i~~L~~~~~   74 (293)
T cd06226           2 PNLAQWVDIGD----SWDKPGGP---AGYDIRALKLTNKATNSPTGPKPVFFIMGAIHAREYTTAELVLRFAEDLLEGYG   74 (293)
T ss_pred             CcceEEEEeeE----ecccCccc---CCceEEEEEEecCCCCcCCCCCCEEEEECCcCCCcHHHHHHHHHHHHHHHHhcc
Confidence            45556666665    44  0011   899999999998763  3568999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC---------ceeEeeccCCCCCCC--------------
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP---------PFLISLFLPFPVTKN--------------  404 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~---------~~gvdlnrnf~~~~~--------------  404 (651)
                      . |+++++||++++|+|||++||||+++++. +++|||+|.+         ..|||||||||+.|.              
T Consensus        75 ~-d~~v~~lL~~~~i~ivP~~NPDG~~~~~~-~~~wRkNr~~~~~~~~~~n~~GVDLNRNf~~~w~~~~~~~~~p~~~~y  152 (293)
T cd06226          75 T-DADATWLLDYHEIHVVPIVNPDGRKIAEQ-GLSQRKNANTSGGSNCSGSSYGVDLNRNYSFGWGGAGASSGDPCSETY  152 (293)
T ss_pred             c-CHHHHHHHhcCeEEEEecccCCcceeecc-CcceeccCCCCCCCCccccccccccccCCCCcCCcCCCCCCCCCCCCc
Confidence            6 89999999999999999999999999876 7899999853         479999999997653              


Q ss_pred             ---CCCCCCChHHHHHHHHHhhcc-----------------CCCCcCCC-----C-------CCCCc-----cccc--cC
Q psy8322         405 ---KPALTPDTDVFLHLASTYARL-----------------HPTMHMKR-----P-------CPGNT-----VLKF--EN  445 (651)
Q Consensus       405 ---~~~~~~~~~~f~~l~~~~a~~-----------------~~~~~~~~-----~-------~~~~~-----~~~~--~~  445 (651)
                         .+.++||+++++.+..+....                 ...+|...     +       +++..     ...+  ..
T Consensus       153 ~G~~p~SEpEt~Av~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~HS~g~~i~~P~g~~~~~~p~~~~~~~la~~~~~~~  232 (293)
T cd06226         153 RGPAPGSEPETAALEDYIRGLFPDQRGPGDTDPAPDDTTGVYLDIHSYSNLVLYPWGWTTQPAPNDTQLRALGRKFASFN  232 (293)
T ss_pred             CCCCCCCcHHHHHHHHHHHhccccccccccccccccccceEEEEeccCCCeEeecCcCCCCCCCCHHHHHHHHHHHhhcC
Confidence               346789999999888765311                 12222211     1       11000     0000  11


Q ss_pred             c--ceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCc-chhhhhchHHHHH
Q psy8322         446 G--VTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEI-PIHWRSNQNALIS  501 (651)
Q Consensus       446 g--i~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i-~~~w~~nr~all~  501 (651)
                      |  ..+...||+++|+++||+|...+++++||||+|++||+.+++ +.+|.+||++|+.
T Consensus       233 gy~~~~~~~~Y~~~G~~~Dw~y~~~gi~s~TiElg~~~~~~~~~~~~~~~~~n~~~~~~  291 (293)
T cd06226         233 GYTPQQSVGLYPTDGTTDDWSYGELGVAAYTFEIGTSFFQSCSSFESGILPDNRPALYY  291 (293)
T ss_pred             CccccccceEEecCCChhHhHhhcCCceEEEEEccCCCCCCcccccccccccCHHHHhh
Confidence            1  133555899999999999998888999999999999988766 6999999999874

This group belongs to the M14 family of metallocarboxypeptidases (MCPs). The M14 family are zinc-binding CPs which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPT exhibits dual-substrate specificity by cleaving C-terminal hydrophobic amino acid residues and C-terminal positively charged residues. However, CPT does not belong to this CPT-like group.

>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.93  E-value=2e-25  Score=226.95  Aligned_cols=140  Identities=25%  Similarity=0.307  Sum_probs=119.5

Q ss_pred             EEEEeccccCCceEEEEEEcCCCC----------------------------CCCCCCeEEEEecccCCChhHHHHHHHH
Q psy8322          50 ELYSIGKSVLGKDLLVVNISTAPV----------------------------HQLGVPNVKIVGNIHGDEPIGREIILRL  101 (651)
Q Consensus        50 ~~~~iG~S~egr~i~~v~i~~~~~----------------------------~~~~k~~v~i~~~iHg~E~~g~~~~l~~  101 (651)
                      +++++|+|+|||+|+++.|++...                            ...+||.|||.++|||+||+|+++++++
T Consensus         1 ~l~~iGkS~EGR~l~~~~Iss~~n~~~ld~~~~~~~~la~~~~~~~~~a~~~~~~~kp~v~i~~~iHg~E~~g~ea~l~l   80 (273)
T cd06240           1 KLVEIGKTEEGRPQIMAAISSPENLAKLDHYKAILRKLADPRGLTEEQARALIAEGKPIVWIDGGLHSTETGGPQMLMEL   80 (273)
T ss_pred             CeeEeecCCCCCeEEEEEeeChhHhhhHHHHHHHHhhhhccccccchhhhhhhccCCCEEEEECCcCCCchHHHHHHHHH
Confidence            478999999999999999997432                            1246999999999999999999999999


Q ss_pred             HHHHHHHhccCChhHHHhhcCceEEEEeccCccccccccccccc----C-------CCCCCCccCcCCCCCCCcccCCCC
Q psy8322         102 LEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR----S-------GRGRNNINNHDLNRQFPDYFRHNR  170 (651)
Q Consensus       102 ~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~----~-------~~~r~n~~GvDLNRnf~~~w~~~~  170 (651)
                      +++|+.   +.|++++++|++++|+|+|++||||+++...-.++    .       ...+.+..|+||||+|-       
T Consensus        81 ~~~L~~---~~d~~~~~lLd~~~i~i~P~~NPDG~er~~~w~~~~~~~~~~~~~~~~~~~~~y~g~DlNRD~~-------  150 (273)
T cd06240          81 AYRLAT---EEDPEIKRILDNVIVLIVPVANPDGRDRVVDWYMRTLGPPKRDRSPLPPLYGKYVGHDNNRDGY-------  150 (273)
T ss_pred             HHHHHh---cCCHHHHHHHhcCEEEEEeCcCCCHHHHhhhhhhhccCCcccCCCCcccccCccCCcCCCcccc-------
Confidence            999997   56899999999999999999999999985421111    0       11256788999999996       


Q ss_pred             CCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCc
Q psy8322         171 SNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGN  209 (651)
Q Consensus       171 s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~  209 (651)
                                ..+.||++++.+++.++.|.+++|+|..+
T Consensus       151 ----------~~~~~et~~~~~~~~~w~P~v~~D~He~g  179 (273)
T cd06240         151 ----------MNQQETTNNSRKLFLEWHPQIMYDLHQSG  179 (273)
T ss_pred             ----------hhcCHHHHHHHHHHHhcCCcEEEEcccCC
Confidence                      37899999999999999999999999763

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T

>cd03864 M14_CPN Peptidase M14 Carboxypeptidase N (CPN, also known as kininase I, creatine kinase conversion factor, plasma carboxypeptidase B, arginine carboxypeptidase, and protaminase; EC 3

Probab=99.92  E-value=1.9e-25  Score=239.07  Aligned_cols=143  Identities=35%  Similarity=0.608  Sum_probs=123.1

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      +.+|...++...|.    |+       |||+|++|+||+++ .+...||+|+++|+||||||+|++++++++++||++|.
T Consensus        16 ~~yP~i~~l~sIG~----Sv-------eGR~i~~l~is~~~~~~~~~kp~v~~~g~iHg~E~ig~e~ll~l~~~L~~~y~   84 (392)
T cd03864          16 NECPYITRIYSIGR----SV-------EGRHLYVLEFSDNPGIHEPLEPEFKYVGNMHGNEVLGRELLIQLSEFLCEEYR   84 (392)
T ss_pred             HHCCCeEEEEEeee----cc-------CCceEEEEEecCCCccccCCCCEEEEEcccCCCcHHHHHHHHHHHHHHHHhcc
Confidence            36677777777787    77       99999999999977 45667999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeeccccc---CCCCCCCceeEeeccCCCCCCC--------------------
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR---SGRGRTPPFLISLFLPFPVTKN--------------------  404 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~---~~kgr~~~~gvdlnrnf~~~~~--------------------  404 (651)
                      .+|+++++||++++|||||++||||+++++++++.   |..+|.|+.|||||||||..+.                    
T Consensus        85 ~~d~~v~~lL~~~~i~ivP~~NPDG~e~~~~~~~~~~~~~~~R~Na~GVDLNRNFp~~~~~~~~~~~~~g~~~~~P~~~~  164 (392)
T cd03864          85 NGNERITRLIQDTRIHILPSMNPDGYEVAARQGPEFNGYLVGRNNANGVDLNRNFPDLNTLMYYNEKYGGPNHHLPLPDN  164 (392)
T ss_pred             cCCHHHHHHHhcCeEEEEeeeCCchHHhhhccCCCcCccccccccccCcccccCCCcccccchhhhccCCccccCCCccc
Confidence            66899999999999999999999999999876544   3468999999999999994310                    


Q ss_pred             -CCCCCCChHHHHHHHHHh
Q psy8322         405 -KPALTPDTDVFLHLASTY  422 (651)
Q Consensus       405 -~~~~~~~~~~f~~l~~~~  422 (651)
                       ....+||+.++..+..++
T Consensus       165 ~~~~~epET~Av~~~~~~~  183 (392)
T cd03864         165 WKSQVEPETLAVIQWMQNY  183 (392)
T ss_pred             cccccCHHHHHHHHHHHhc
Confidence             134688999888888765

4.17.3) is an extracellular glycoprotein synthesized in the liver and released into the blood, where it is present in high concentrations. CPN belongs to the N/E subfamily of the M14 family of metallocarboxypeptidases (MCPs).The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. CPN plays an important role in protecting the body from excessive buildup of potentially deleterious peptides that normally act as local autocrine or paracrine hormones. It specifically removes C-terminal basic residues. As CPN can cleave lysine more avidly than arginine residues it is also called lysine carboxypeptidase. CPN substrates inclu

>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins

Probab=99.91  E-value=1.1e-24  Score=210.64  Aligned_cols=159  Identities=26%  Similarity=0.304  Sum_probs=123.2

Q ss_pred             EEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCC
Q psy8322          81 VKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNR  160 (651)
Q Consensus        81 v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNR  160 (651)
                      |+|+||+||+|++|.+++++|++.|+..          .|++.+|+|||++||||+++.+         |.|+.||||||
T Consensus         1 vli~agiHG~E~~g~~~~~~l~~~l~~~----------~l~~~~i~ivP~~NPdG~~~~~---------R~n~~gvDLNR   61 (178)
T cd06904           1 VLIIGGIHGDEPASVSDLEELLRILPGL----------ILRGLSWYVIPVLNPDGLLRAT---------RCNANGVDLNR   61 (178)
T ss_pred             CEEEeccCCCCHHHHHHHHHHHHHHHHH----------hhcCCeEEEEeCcCccHHhhCc---------ccCCCCcChhh
Confidence            5899999999999999999999999863          2788999999999999999754         77889999999


Q ss_pred             CCCcccCCCCCCC-CCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHH
Q psy8322         161 QFPDYFRHNRSNI-PTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDY  239 (651)
Q Consensus       161 nf~~~w~~~~s~~-p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~  239 (651)
                      |||..|...+++. +.|+|+.++||||++++.+++.+.++.++||+|++...+.++.             +.  +.+   
T Consensus        62 nFp~~~~~~~~~~~~~~~G~~~~sepEt~al~~~~~~~~~~~~idlHs~~~~~~~~~-------------~~--~~l---  123 (178)
T cd06904          62 NFPTKDWPPGASRYRRYPGPKPGSEPESRALMDLIERFKPDVVVSFHAPLGVLDGDG-------------PN--EPL---  123 (178)
T ss_pred             cCCccccccCCCcccccCCCCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCeecCCC-------------ch--hHH---
Confidence            9999998765443 4599999999999999999999999999999999866544321             00  111   


Q ss_pred             HHhhcccCCccccccccccccchhhhcccC---CCCeEEEEEeeCc
Q psy8322         240 FRHNRSNIPTLVSTSQSIDPEVQAVIDWMN---SVPFVMSLQLHGG  282 (651)
Q Consensus       240 ~~~~~~~~~~~~~~~~~~~~~~g~~~dw~~---~~p~~~t~el~g~  282 (651)
                      ++......     ....-++..|+..+|+.   ++| ++++|+.++
T Consensus       124 a~~~g~~~-----~~~~~~~~~G~~~~~a~~~~gip-~it~Elg~~  163 (178)
T cd06904         124 ARKFGYLG-----FDDLGYPTPGSLGSWAGVERNIP-VITIELPYN  163 (178)
T ss_pred             HHHhCCCc-----cccCCccCCCcHHHHHhhcCCCe-EEEEEcCCc
Confidence            11111111     11222456788899993   555 788888876

MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.

>cd03862 Peptidase_M14-like_7 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.91  E-value=3.7e-24  Score=218.68  Aligned_cols=171  Identities=24%  Similarity=0.341  Sum_probs=129.5

Q ss_pred             CCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCce
Q psy8322         295 GESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE  374 (651)
Q Consensus       295 gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~  374 (651)
                      |...+|++|+|++..   ..+|.|+++||+||+||+|++++++++++|+.+|.. |+.++.+|++++|+|||++||||  
T Consensus         7 ~~~~pi~~v~ig~~~---~~~p~v~i~~giHg~E~ig~~~~l~~l~~L~~~~~~-d~~~~~ll~~~~i~ivP~vNPdG--   80 (273)
T cd03862           7 GLRFPIYALELGSPD---PKAPVLGLVGGVHGLERIGTQVLLAFLESLLERLRW-DKLLQELLEKVRLVFLPLVNPVG--   80 (273)
T ss_pred             CCcceeEEEEecCCC---CCCCEEEEEcCcCCCcHHHHHHHHHHHHHHHHhccc-cHHHHHHHhCCeEEEEeccCcCH--
Confidence            357899999998643   468999999999999999999999999999999976 89999999999999999999999  


Q ss_pred             eeecccccCCCCCCCceeEeeccCCCCCCC---------------------C--CCCCCChHHHHHHHHHhh--------
Q psy8322         375 LAVEGNCRSGRGRTPPFLISLFLPFPVTKN---------------------K--PALTPDTDVFLHLASTYA--------  423 (651)
Q Consensus       375 ~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~---------------------~--~~~~~~~~~f~~l~~~~a--------  423 (651)
                             +|+++|.|..|||||||||+.+.                     .  ..++||++++..+..++.        
T Consensus        81 -------~~~~~R~n~~GVDLNRNfp~~~~~~~~~~~~G~~~~p~~~~Y~G~~~~~sEpEt~al~~~~~~~~~~~~~~~~  153 (273)
T cd03862          81 -------MALKTRSNGNGVDLMRNAPVDAEDKPPFLVGGQRLSPRLPWYRGKNGAGMELEAQALCRFVRELLFESPFSIA  153 (273)
T ss_pred             -------HHhcccCCCCCcccCCCCCCCccccccccccCccCCCCCCCCCCCCCCCCCHHHHHHHHHHHHhcccCCeEEE
Confidence                   46788999999999999996632                     1  468888999988887651        


Q ss_pred             -ccCCCCc--C---------CCC-CCCC--------c-----cccccCcceeccceEeccCcccchhhhcc-------ce
Q psy8322         424 -RLHPTMH--M---------KRP-CPGN--------T-----VLKFENGVTNGAAWYSFSGGMADYNYLYH-------GC  470 (651)
Q Consensus       424 -~~~~~~~--~---------~~~-~~~~--------~-----~~~~~~gi~n~~~~y~~sG~~~D~~y~~~-------~~  470 (651)
                       +-|-+++  .         ... +...        .     ...+..|  .....|+++|++.||+|...       ..
T Consensus       154 ld~HSg~G~~~~i~~Pyg~~~~~~~~~~~~~~l~~~~~~~~~~~~Y~~g--~~s~~Y~a~G~~~D~~y~~~~~~~~~~~~  231 (273)
T cd03862         154 LDCHSGFGLVDRIWFPYAYTKEPIPHLAEIYALKELLERTYPNHVYRFE--PQSRHYLTHGDLWDYLYDQHQKQQPNGRF  231 (273)
T ss_pred             EEECCCCCccCEEEcCCcCCCCCCCCHHHHHHHHHHHHHhCCCCceEEC--CcceeEECCCCHHHHHHhhcCcccccccc
Confidence             3333322  0         001 1100        0     0011111  12225999999999999753       34


Q ss_pred             eEEEEEeccc
Q psy8322         471 LELTLEISCC  480 (651)
Q Consensus       471 ~~~T~El~~~  480 (651)
                      +.+|+|++..
T Consensus       232 l~~TlE~Gt~  241 (273)
T cd03862         232 LPLTLEMGSW  241 (273)
T ss_pred             eeEEEEeecc
Confidence            7999999865

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd06237 M14_Nna1_like_3 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP),-like proteins

Probab=99.91  E-value=3.7e-24  Score=215.85  Aligned_cols=173  Identities=18%  Similarity=0.218  Sum_probs=127.4

Q ss_pred             EEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhh
Q psy8322         274 VMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNI  353 (651)
Q Consensus       274 ~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v  353 (651)
                      .++....|.    ++       |||+|++|+|++++    .||.|++.|++||+||+|++++++++++|+.+    ++.+
T Consensus        25 ~v~~~~iG~----S~-------eGR~i~~l~ig~~~----~k~~v~i~~~iH~~E~~g~~~~~~~~~~l~~~----~~~~   85 (244)
T cd06237          25 FVELELLGL----ST-------QGRPLKALERGNPD----SKEWIVVISRQHPPEVTGALAMKAFIETLLSD----SELA   85 (244)
T ss_pred             CeEEEEeeE----cC-------CCCEEEEEEecCCC----CCceEEEEcCcCCCcHHHHHHHHHHHHHHHhC----CHHH
Confidence            367777777    78       99999999998654    68999999999999999999999999999962    4557


Q ss_pred             hhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhhc------cCC
Q psy8322         354 RFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYAR------LHP  427 (651)
Q Consensus       354 ~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a~------~~~  427 (651)
                      ++||++++|+|||++||||+++..     |   |.|+.|+||||||+.     .++||+.++..+..+...      .+.
T Consensus        86 ~~ll~~~~i~ivP~~NPDG~~~~~-----w---R~N~~GvDLNRnw~~-----~sepEt~a~~~~~~~~~~~~~~~~~~i  152 (244)
T cd06237          86 KKFRAKYNVLLVPNMNPDGVDLGH-----W---RHNANGIDLNRDWSN-----FNQPETRAIRDYLVRLVKEGGKIVFAL  152 (244)
T ss_pred             HHHHHhCEEEEEEeeCcchhhcCC-----c---cCCCCCcCCCCCCCC-----CCCHHHHHHHHHHHHHhccCCCEEEEE
Confidence            899999999999999999999742     5   455579999999963     468999988887664310      011


Q ss_pred             CCcCC---------CCCCCC--------------ccccccCcceeccceEeccCcccchhhhccceeEEEEEeccc
Q psy8322         428 TMHMK---------RPCPGN--------------TVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCC  480 (651)
Q Consensus       428 ~~~~~---------~~~~~~--------------~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~  480 (651)
                      .+|..         ..+...              ....|..+  +...-|+++|+++||.|...++++||+||+..
T Consensus       153 d~Hs~~~~i~~~~~~~~~~~~p~~~~~~~~~l~~~~~~Y~~~--~~~~~~~~~g~~~Dw~~~~~~~~~~T~E~g~~  226 (244)
T cd06237         153 DFHSTWHDVFYTMPEDYKLQFPGFVADWLKELDKRILDYKVN--NRSGSSPDRGVSKQYFADEHGAHAITYEVGDN  226 (244)
T ss_pred             EeccCCcceEecCCCCCCcccchHHHHHHHHhcCcCCCceec--cccCcccCCCcHHHHHHHhCCCcEEEEecCCC
Confidence            11110         001100              00111111  22223688999999999988888999999743

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.

>KOG2649|consensus

Probab=99.90  E-value=5.3e-24  Score=223.57  Aligned_cols=104  Identities=44%  Similarity=0.777  Sum_probs=101.9

Q ss_pred             CCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCce
Q psy8322         296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE  374 (651)
Q Consensus       296 egr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~  374 (651)
                      |||+||+++||+.| .|..++|++.++|+|||+|.+|+|++++++++||.+| .+|++|++||++++|||||++||||||
T Consensus       100 ~Gr~L~Vle~sd~PgeH~~gePEfKyv~nmHGnE~vGRElll~L~e~Lc~~y-~~n~~i~~Lv~~trIHlmPSmNPDGyE  178 (500)
T KOG2649|consen  100 EGRELWVIEISDRPGEHEPGEPEFKYIGNMHGNEVVGRELLLRLAEYLCDNY-GKDPRITQLVNNTRIHIMPSMNPDGYE  178 (500)
T ss_pred             cCceEEEEEcCCCCCcccCCCCcceeeeeccccccccHHHHHHHHHHHHHhc-CCChHHHHHHhhceEEEecccCcchhh
Confidence            99999999999999 7899999999999999999999999999999999999 559999999999999999999999999


Q ss_pred             eeecccccCCCCCCCceeEeeccCCC
Q psy8322         375 LAVEGNCRSGRGRTPPFLISLFLPFP  400 (651)
Q Consensus       375 ~~~~~~~~~~kgr~~~~gvdlnrnf~  400 (651)
                      ++.+++|-|.-||.|+.|+|||||||
T Consensus       179 ~a~~~~~~~~~GR~Nang~DLNrnFP  204 (500)
T KOG2649|consen  179 IAKRGDRGWATGRNNANGVDLNRNFP  204 (500)
T ss_pred             hhhcccccceecccCccccchhccCc
Confidence            99999999999999999999999998

>PF00246 Peptidase_M14: Zinc carboxypeptidase This is family M14 in the peptidase classification

Probab=99.89  E-value=6.4e-24  Score=220.78  Aligned_cols=217  Identities=34%  Similarity=0.587  Sum_probs=166.7

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      ..+|..+++...|.    ++       |||+|++++|++.. ....+||.|+++|++||+||+|++++++++++|+.+| 
T Consensus        10 ~~~p~~v~~~~iG~----S~-------~Gr~i~~~~i~~~~~~~~~~k~~v~i~~~~Hg~E~~g~~~~l~~~~~L~~~~-   77 (279)
T PF00246_consen   10 ARYPDIVRLESIGK----SY-------EGRPIYALTIGSNSNGSDPGKPTVLIIAGIHGNEWIGSEALLYLIEELLSGY-   77 (279)
T ss_dssp             HHSTTTEEEEEEEE-----T-------TS-EEEEEEESSSTTTTSTTSEEEEEEE-SSTT-THHHHHHHHHHHHHHHHT-
T ss_pred             HHCCCcEEEEEeeE----CC-------CCCeEEEEEeecccccccccccceEEEecccccccCchHHHHHHHHHhhccc-
Confidence            35677777777777    77       99999999999764 3456899999999999999999999999999999998 


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCC----------------CCCCCCC
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKN----------------KPALTPD  411 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~----------------~~~~~~~  411 (651)
                       .|+.++.||++++|+|||++||||+++...++|.|+++|.|..|||||||||+.|.                .+.++||
T Consensus        78 -~~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~w~~~R~n~~GvDlNRnf~~~w~~~~~~~~~~~~~y~g~~~~sepE  156 (279)
T PF00246_consen   78 -DDPEVKELLDNVVIYIIPMVNPDGYEYGTSGDRGWRKNRSNANGVDLNRNFPYQWNEEGSSSNPCSETYRGPAPFSEPE  156 (279)
T ss_dssp             -TSHHHHHHHHHEEEEEES-SSHHHHHHHHHT-TTCCSTSSBTTS--GGGSSSSSTTSSSSBSSTTSTTB--SSTTTSHH
T ss_pred             -cchhhhhhcccceEEEEeeecccceeeeeecccccccccccccccccccccCcccccccccCCCCCcccCCCcchhhhH
Confidence             48999999999999999999999999999999999999999999999999987752                2357899


Q ss_pred             hHHHHHHHHHhh-----ccCCCCcC-----CCCC----CCC------------------ccccc-cCcceeccceEeccC
Q psy8322         412 TDVFLHLASTYA-----RLHPTMHM-----KRPC----PGN------------------TVLKF-ENGVTNGAAWYSFSG  458 (651)
Q Consensus       412 ~~~f~~l~~~~a-----~~~~~~~~-----~~~~----~~~------------------~~~~~-~~gi~n~~~~y~~sG  458 (651)
                      .++++.+.+...     +-|.....     ...+    ...                  ....+ ..|+.++..||+++|
T Consensus       157 t~al~~~~~~~~~~~~id~H~~~~~~~~p~~~~~~~~~~~~~~~~~la~~~~~~~~~~~~~~~y~~~~~~~~~~~~~~~G  236 (279)
T PF00246_consen  157 TRALRNLIQDWNPDFFIDFHSGGNAILYPYGYSYDEPPPDADELRSLARAFAEALGSMSRGQNYDSYGITNGDNWYPASG  236 (279)
T ss_dssp             HHHHHHHHHHTTEEEEEEEEESSSEEEESESSSSTSSTTTHHHHHHHHHHHHHHHHCHTTTTTBSEEEEEHHHHTTTTSS
T ss_pred             HHHHHHHHhhcceeEEEeccccccceeeecccccccCCchhhhhhHHHHHHHHHhhhccccccccccCCccccccccccc
Confidence            999999987652     11111110     1011    000                  00012 334455566899999


Q ss_pred             cccchhhhccce-eEEEEEecccC--CCCCCCcchhhhhchHH
Q psy8322         459 GMADYNYLYHGC-LELTLEISCCR--YPAPSEIPIHWRSNQNA  498 (651)
Q Consensus       459 ~~~D~~y~~~~~-~~~T~El~~~~--~p~~~~i~~~w~~nr~a  498 (651)
                      ++.||+|...++ +++|+||+||+  +||.++|..+|++|+++
T Consensus       237 ~~~D~~~~~~g~~~~~t~E~~~~~~f~p~~~~i~~~~~~~~~~  279 (279)
T PF00246_consen  237 SSDDYAYYHHGIPFSFTLELGCCGNFYPPASEIEPIWEENWEA  279 (279)
T ss_dssp             SHHHHHHHHTTSSEEEEEEESSSSSTSS-GGGHHHHHHHHHH-
T ss_pred             ccceeehhhcCCcEEEEEEeCCCCCccCCHHHHHHHHHHHhhC
Confidence            999999987777 99999999998  79999999999999864

; InterPro: IPR000834 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Metalloproteases are the most diverse of the four main types of protease, with more than 50 families identified to date. In these enzymes, a divalent cation, usually zinc, activates the water molecule. The metal ion is held in place by amino acid ligands, usually three in number. The known metal ligands are His, Glu, Asp or Lys and at least one other residue is required for catalysis, which may play an electrophillic role. Of the known metalloproteases, around half contain an HEXXH motif, which has been shown in crystallographic studies to form part of the metal-binding site []. The HEXXH motif is relatively common, but can be more stringently defined for metalloproteases as 'abXHEbbHbc', where 'a' is most often valine or threonine and forms part of the S1' subsite in thermolysin and neprilysin, 'b' is an uncharged residue, and 'c' a hydrophobic residue. Proline is never found in this site, possibly because it would break the helical structure adopted by this motif in metalloproteases []. This group of sequences contain a diverse range of gene families, which include metallopeptidases belonging to MEROPS peptidase family M14 (carboxypeptidase A, clan MC), subfamilies M14A and M14B. The carboxypeptidase A family can be divided into two subfamilies: carboxypeptidase H (regulatory) and carboxypeptidase A (digestive) []. Members of the H family have longer C-termini than those of family A [], and carboxypeptidase M (a member of the H family) is bound to the membrane by a glycosylphosphatidylinositol anchor, unlike the majority of the M14 family, which are soluble []. The zinc ligands have been determined as two histidines and a glutamate, and the catalytic residue has been identified as a C-terminal glutamate, but these do not form the characteristic metalloprotease HEXXH motif [, ]. Members of the carboxypeptidase A family are synthesised as inactive molecules with propeptides that must be cleaved to activate the enzyme. Structural studies of carboxypeptidases A and B reveal the propeptide to exist as a globular domain, followed by an extended alpha-helix; this shields the catalytic site, without specifically binding to it, while the substrate-binding site is blocked by making specific contacts [, ]. Other examples of protein families in this entry include: Intron maturase Putative mitochondrial processing peptidase alpha subunit Superoxide dismutase [Mn] (1.15.1.1 from EC) Asparagine synthetase [glutamine-hydrolysing] 3 (6.3.5.4 from EC) Glucose-6-phosphate isomerase (5.3.1.9 from EC) ; GO: 0004181 metallocarboxypeptidase activity, 0008270 zinc ion binding, 0006508 proteolysis; PDB: 3DGV_A 3OSL_C 3D4U_A 2NSM_A 1QMU_A 1H8L_A 2PJ2_A 2PJ9_A 1ZG8_A 1Z5R_A ....

>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.88  E-value=6.2e-22  Score=198.59  Aligned_cols=125  Identities=28%  Similarity=0.464  Sum_probs=110.4

Q ss_pred             cEEEEEeccccC-CceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEE
Q psy8322          48 MTELYSIGKSVL-GKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIH  126 (651)
Q Consensus        48 ~~~~~~iG~S~e-gr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~  126 (651)
                      .+++..+|+..+ +++|+++++.+.   .++||.|+|+||+||+||.|++++++|++.+..          .++++++|+
T Consensus        14 ~~~~~~~g~~~~~~~pL~~l~~~~~---~~~~p~vlI~gGiHG~E~~G~~a~l~~l~~l~~----------~~l~~~~i~   80 (236)
T cd06231          14 RLDVREYGQLAYQSYPLYALKSRGW---DSDLPRVLITAGIHGDEPAGPLGALEFLRAAAL----------ELAQDVNLS   80 (236)
T ss_pred             ceEEEEccccccCCeeEEEEEcCCC---CCCCCEEEEECCCCCCcHHHHHHHHHHHHHHHH----------HHhcCCeEE
Confidence            468889999665 999999999764   247899999999999999999999999999875          368889999


Q ss_pred             EEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CcEEEEE
Q psy8322         127 LLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV--PFVMSLQ  204 (651)
Q Consensus       127 iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~--~~~~~i~  204 (651)
                      |+|++|||||+...         |.|+.|+||||||+.                +.++||++++++++.+.  ++.+++|
T Consensus        81 ivP~vNPdG~~~~~---------R~n~~g~DLNR~F~~----------------~~~~~E~~al~~~~~~~~~~~~~~ID  135 (236)
T cd06231          81 VYPCINPSGFEAIT---------RWNRNGIDPNRSFRS----------------ESPSPEVRLLMEWLRRLGAAFDLHID  135 (236)
T ss_pred             EEECcChhHHhcCc---------cCCCCCccccCCCCC----------------CCCCHHHHHHHHHHHHhCCCcEEEEE
Confidence            99999999999754         889999999999983                46789999999999988  7999999


Q ss_pred             EecCce
Q psy8322         205 LHGGNV  210 (651)
Q Consensus       205 ~H~~~~  210 (651)
                      +|++..
T Consensus       136 LH~~~~  141 (236)
T cd06231         136 LHEDTE  141 (236)
T ss_pred             eCCCCC
Confidence            999873

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd03856 M14_Nna1_like Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=99.87  E-value=5.9e-22  Score=202.95  Aligned_cols=180  Identities=16%  Similarity=0.125  Sum_probs=133.1

Q ss_pred             CeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCCh
Q psy8322         272 PFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDS  351 (651)
Q Consensus       272 p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~  351 (651)
                      +..+++...|.    ++       |||+|++++++..    .+||+||+.|++||+||+|++++++++++|+.+    ++
T Consensus        25 ~~~v~l~~IG~----s~-------egr~i~~~~~~~~----~~k~~i~i~a~iH~~E~~~~~~~~~li~~Ll~~----~~   85 (269)
T cd03856          25 GNSCDLLTITS----PP-------EGNDIKYEHLCSF----ANKKYIFLIARVHPGETNASWVMKGFLEFLLSD----NP   85 (269)
T ss_pred             CCceeEEEecc----CC-------CCccccceeccCC----CCCcEEEEEcCcCCCchHHHHHHHHHHHHHHhC----CH
Confidence            45567777776    77       9999999999754    389999999999999999999999999999974    45


Q ss_pred             hhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhhc------c
Q psy8322         352 NIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYAR------L  425 (651)
Q Consensus       352 ~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a~------~  425 (651)
                      .++.||++++|+|||++||||+++.+     |   |.++.|+||||||+-  +....+|+...++.+...+..      .
T Consensus        86 ~~~~ll~~~~~~ivP~~NPDG~~~g~-----~---R~n~~G~DLNR~~~~--p~~~~~pE~~~~~~~~~~~~~~~~~~~~  155 (269)
T cd03856          86 TAQSLRESFVFKIVPMLNPDGVIRGN-----Y---RCSLSGVDLNRQWQN--PSPDLHPEIYLVKGLMLYLAAGKRGVLF  155 (269)
T ss_pred             HHHHHHhcCeEEEEeeeCCccccccC-----C---cCCCCCCCcCCCCCC--CCCCCCCCHHHHHHHHHHHHhccCCceE
Confidence            58999999999999999999998753     3   558899999999963  344678999998888777621      0


Q ss_pred             CCCCcCCC--------CCCCC------------------------ccccccCcceeccceEeccCcccchhhhc-cceeE
Q psy8322         426 HPTMHMKR--------PCPGN------------------------TVLKFENGVTNGAAWYSFSGGMADYNYLY-HGCLE  472 (651)
Q Consensus       426 ~~~~~~~~--------~~~~~------------------------~~~~~~~gi~n~~~~y~~sG~~~D~~y~~-~~~~~  472 (651)
                      ...+|...        .|...                        .+..|..+  +...-|+.+|++.||.|.. +.+++
T Consensus       156 ~idlH~~~~~~~~f~yG~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~f~~~--~~~~~~~~~gtsr~~~~~~~~i~~s  233 (269)
T cd03856         156 YCDFHGHSRKKNVFMYGCSFKDEVWDQGYRIIPKMLSQNAPLFCMFGCSFKVE--KSKASDPDRGTGRVVVAKQIKVQHS  233 (269)
T ss_pred             EEEecCCCccCceEeecCCCchhhhhhHHHHHHHHHHhhChhhhhcCCCcCCC--cCCcccCCCChHHHHHHHhcCCcEE
Confidence            00111110        01100                        01112222  2222378999999999976 55599


Q ss_pred             EEEEecccCC
Q psy8322         473 LTLEISCCRY  482 (651)
Q Consensus       473 ~T~El~~~~~  482 (651)
                      ||+|++.++.
T Consensus       234 yTlE~~~~g~  243 (269)
T cd03856         234 YTMEVTFNGN  243 (269)
T ss_pred             EEEecCCCCc
Confidence            9999997654

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subfamily includes the human AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. M

>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.87  E-value=1.1e-21  Score=190.93  Aligned_cols=135  Identities=23%  Similarity=0.194  Sum_probs=113.7

Q ss_pred             CCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHH
Q psy8322          29 HNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVE  108 (651)
Q Consensus        29 ~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~  108 (651)
                      .++.+|...|..|    |.+   ..--+|+|||+|++++|+      .+||.|||.||+||+||+|+.++++|++.|++ 
T Consensus         2 ~~~~~i~~~l~~~----~g~---~~~a~S~EGR~I~~l~i~------~~Kp~I~I~gGvHarEwig~~~al~fi~~L~~-   67 (240)
T cd06232           2 LSAGQIAYELAVL----PGI---EFAARSRQGRPVTGRYVA------GLDHPVVISAGQHANETSGVVGALRAAEALAA-   67 (240)
T ss_pred             CCHHHHHHHHhhc----CCc---cccccccCCCeeeEEEec------CCCcEEEEeCCcCCCcchhHHHHHHHHHHHhc-
Confidence            4678888888777    553   225679999999999993      24899999999999999999999999999985 


Q ss_pred             hccCChhHHHhhcCceEEEEeccCcccccccccccccCCCC------CCCccCcCCC-CCCCcccCCCCCCCCCCCCCCC
Q psy8322         109 YIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRG------RNNINNHDLN-RQFPDYFRHNRSNIPTLVSTSQ  181 (651)
Q Consensus       109 ~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~------r~n~~GvDLN-Rnf~~~w~~~~s~~p~y~G~~~  181 (651)
                                 +++++|+|+|++|||||++.. .-+|++..      |.++.|.|+| |++.                 +
T Consensus        68 -----------~~~~n~~I~P~vNPDGYe~~~-~L~r~nP~~~hHaaR~~A~g~D~~fr~~~-----------------~  118 (240)
T cd06232          68 -----------RPGAHFALIPLENPDGYALHE-RLRAEHPRHMHHAARYTALGDDLEYREFP-----------------P  118 (240)
T ss_pred             -----------cCCceEEEEEeeCCcHHHhhc-hhhccCcccccchhhhcccCCCcccccCC-----------------c
Confidence                       678999999999999999853 11244443      8889999999 9875                 3


Q ss_pred             CCcHHHHHHHHHHHhCCcEEEEEEecC
Q psy8322         182 SIDPEVQAVIDWMNSVPFVMSLQLHGG  208 (651)
Q Consensus       182 ~sepEt~al~~~~~~~~~~~~i~~H~~  208 (651)
                      +  .|++++++++.++.+.+.||+|++
T Consensus       119 ~--~Es~~~~~~~~~~~~~~hiDlHey  143 (240)
T cd06232         119 F--GEREARHQALAKSGAQLHVNLHGY  143 (240)
T ss_pred             c--hHHHHHHHHHHhhCCcEEEECCCC
Confidence            3  899999999999999999999998

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>cd06234 M14_Nna1_like_1 A bacterial subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP)-like proteins

Probab=99.86  E-value=3.5e-21  Score=195.64  Aligned_cols=122  Identities=21%  Similarity=0.260  Sum_probs=105.0

Q ss_pred             EEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhh
Q psy8322         274 VMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNI  353 (651)
Q Consensus       274 ~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v  353 (651)
                      .++.+..|.    ++       |||+|++|+|+++   ..+||.||++|++||+|++|..++..+++.|+..+   |+.+
T Consensus        28 ~v~~~~iG~----S~-------eGR~i~~l~I~~~---~~~k~~V~i~a~iH~~E~~g~~~~~~ll~~L~~~~---d~~~   90 (263)
T cd06234          28 DVRLEVLGQ----TV-------QGRDIDLLTFGEP---GPGKKKLWIIARQHPGETMAEWFMEGLLERLLDPD---DAVA   90 (263)
T ss_pred             CeEEEEEEE----cC-------CCCeEEEEEEccC---CCCCCEEEEECCCCCCcHHHHHHHHHHHHHHhhcC---CHHH
Confidence            467777777    78       9999999999874   24789999999999999999999999999999854   7899


Q ss_pred             hhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         354 RFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       354 ~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      ++||++++|+|||++||||+++.+        .|.|+.|+||||||+.  ....++||...++.+..+.
T Consensus        91 ~~ll~~~~~~IvP~~NPDG~~~g~--------~R~n~~GvDLNRnw~~--p~~~s~PEt~av~~~~~~~  149 (263)
T cd06234          91 RALLEKAVFYVVPNMNPDGSARGH--------LRTNAAGANLNREWAE--PSAERSPEVFAVRQRMEET  149 (263)
T ss_pred             HHHHhcCEEEEEeeecchhhhhcC--------CccCCCCCCCCCCCCC--CCCCCCHHHHHHHHHHHhc
Confidence            999999999999999999999864        2689999999999963  2345789998888877654

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins (such as alpha-tubulin in eukaryotes) to remove a C-terminal tyrosine. Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal domain might act as a folding domain.

>PRK10602 murein peptide amidase A; Provisional

Probab=99.85  E-value=1.1e-21  Score=195.86  Aligned_cols=168  Identities=21%  Similarity=0.228  Sum_probs=120.5

Q ss_pred             CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee
Q psy8322         296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL  375 (651)
Q Consensus       296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~  375 (651)
                      |||+|++++++.+     .++.++++|++||+||+|+++++++++.|+.+             ..+++|||++||||+++
T Consensus        25 egrpi~~l~~~~~-----~~~~vli~agiHG~E~~g~~~~~~l~~~l~~~-------------~~~~~iipvvNPDG~~~   86 (237)
T PRK10602         25 LGAPLLWFPAPAA-----SRESGLILAGTHGDETASVVTLSCALRTLTPS-------------LRRHHVVLAVNPDGCQL   86 (237)
T ss_pred             CCCceEEEEcCCC-----CCceEEEEecCCCCcHHHHHHHHHHHHhhhhh-------------ccceEEEEEECcccccc
Confidence            9999999999754     47899999999999999999999999988643             23579999999999987


Q ss_pred             eecccccCCCCCCCceeEeeccCCCC-CC-----------------------CCCCCCCChHHHHHHHHHhh-ccCCCCc
Q psy8322         376 AVEGNCRSGRGRTPPFLISLFLPFPV-TK-----------------------NKPALTPDTDVFLHLASTYA-RLHPTMH  430 (651)
Q Consensus       376 ~~~~~~~~~kgr~~~~gvdlnrnf~~-~~-----------------------~~~~~~~~~~~f~~l~~~~a-~~~~~~~  430 (651)
                      ..         |.|+.|+|||||||. .|                       ..+.++||.+.+..+..++. .....+|
T Consensus        87 ~~---------R~n~~GvDLNRnFp~~~w~~~~~~~~w~~~~~~~~~~~y~G~~p~SepEt~al~~~i~~~~~~~~~s~H  157 (237)
T PRK10602         87 GL---------RANANGVDLNRNFPAANWKEGETVYRWNSAAEERDVVLLTGDKPGSEPETQALCQLIHRLQPAWVVSFH  157 (237)
T ss_pred             cc---------ccCCCCCchhhcCCCcccccccccccccCCCCccchhhccCCCCCCCHHHHHHHHHHHHcCCCEEEEee
Confidence            74         678999999999995 22                       23446888888888887763 1111222


Q ss_pred             CCCCCCCC-cc--------ccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhh
Q psy8322         431 MKRPCPGN-TV--------LKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRS  494 (651)
Q Consensus       431 ~~~~~~~~-~~--------~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~  494 (651)
                      ....+... ..        ..|..++.. ...|+.+|++.||++. .+++.+|+||++  .+.+++++.+|..
T Consensus       158 sP~~~~~~~~~~~~~~~la~af~~~~~~-~~~y~~~Gs~~~~a~~-~giP~it~El~~--~~~~~~v~~~~~~  226 (237)
T PRK10602        158 DPLACIEDPRHSELGEWLAQAFELPLVT-SVGYETPGSFGSWCAD-LNLHCITAELPP--ISADEASEKYLFA  226 (237)
T ss_pred             ccccccCCccchHHHHHHHHHhCCCeEe-ecCCCCCCcHHHHHHH-cCCcEEEEecCC--cCcHHHHHHHHHH
Confidence            21111110 00        112222222 2348899999999995 456669999997  6677777777654

>cd06238 Peptidase_M14-like_1_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.82  E-value=1.2e-20  Score=192.66  Aligned_cols=119  Identities=24%  Similarity=0.251  Sum_probs=101.3

Q ss_pred             CCcceEEEEeeCCCc-----------------------cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChh
Q psy8322         296 ESKDLLVVNISTAPV-----------------------HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSN  352 (651)
Q Consensus       296 egr~i~~l~is~~~~-----------------------~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~  352 (651)
                      |||+|.++.|++...                       ....+|+||+.|+||||||+|++++++++++|+...   |+.
T Consensus         6 egR~l~~~~I~s~~n~~~l~~~~~~~~~la~p~~~~~~~~~~~~~v~i~~~iH~~E~~g~~~~l~l~~~L~~~~---~~~   82 (271)
T cd06238           6 EGRPLLLATITSPENIARLDQIREDHLALADPAATSSLISDQPVVVWLGYSVHGNEISGTEAALLTAYHLAAAQ---GDE   82 (271)
T ss_pred             CCCeeEEEEEeCHHHHHhHHHHHHHHHHhcCccccccccccCCcEEEEECCcCCCChHHHHHHHHHHHHHHHcC---CHH
Confidence            999999999988532                       123689999999999999999999999999999864   788


Q ss_pred             hhhcccceeEEEEeccCcCCceee-e----------cccccCC-------CCCCCceeEeeccCCCCCCCCCCCCCChHH
Q psy8322         353 IRFLLDNTRIHLLPNLNPDGSELA-V----------EGNCRSG-------RGRTPPFLISLFLPFPVTKNKPALTPDTDV  414 (651)
Q Consensus       353 v~~ll~~~~~~i~P~~NpDG~~~~-~----------~~~~~~~-------kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~  414 (651)
                      +++||++++|+|+|++||||++++ .          +.|+.||       .||.|++|+||||||..     .++||++.
T Consensus        83 ~~~ll~~~~i~i~P~~NPDG~~r~~~w~~~~~~~~~~~d~~~r~~~~~wp~~R~n~~g~DLNRD~~~-----~s~pEtra  157 (271)
T cd06238          83 IEALLDNAVVLIDPMQNPDGRDRFVNWYNSNRGMVPSADPQDREHNEPWPGGRTNHYWFDLNRDWLP-----LTQPESRG  157 (271)
T ss_pred             HHHHHhcCEEEEEeccCCCHHHHHHHhhhhccCCccccchhhhhcccCCccccccccCccccccccc-----ccCHHHHH
Confidence            999999999999999999999963 2          4556554       46789999999999963     45899998


Q ss_pred             HHHHHHHh
Q psy8322         415 FLHLASTY  422 (651)
Q Consensus       415 f~~l~~~~  422 (651)
                      +..+..++
T Consensus       158 ~~~~~~~~  165 (271)
T cd06238         158 RLAAYHEW  165 (271)
T ss_pred             HHHHHHhc
Confidence            88887776

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T

>cd06908 M14_AGBL4_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-4, and related proteins

Probab=99.82  E-value=4.2e-20  Score=187.32  Aligned_cols=130  Identities=18%  Similarity=0.192  Sum_probs=111.8

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC--ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhh
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP--VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEY  346 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~--~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y  346 (651)
                      ..+|..++.+..|.    ++       |||+|++|+|++++  ....+||.||++|++|++||+|+.++++++++|+.+ 
T Consensus         6 ~~~p~~~~~~~iG~----S~-------eGR~i~~l~It~~~~~~~~~~k~~I~i~ariHp~E~~~s~~~~~li~~L~~~-   73 (261)
T cd06908           6 KRSLDYFRREQLGQ----SV-------QKRRLDLLTIDSPDNLREDSEKKVIFITARVHPGESPSSYVCQGLIDFLVSN-   73 (261)
T ss_pred             hhCCCcEEEEEeEE----cC-------CCCeeEEEEEcCCCccccCCCCcEEEEECCcCCCChHHHHHHHHHHHHHhhC-
Confidence            45677788888887    78       99999999998764  234579999999999999999999999999999973 


Q ss_pred             ccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhh
Q psy8322         347 IRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYA  423 (651)
Q Consensus       347 ~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a  423 (651)
                         |+.++.|+++++|+|||++||||+++..        .|.++.|+||||||+..  .+..+|+....+.+...++
T Consensus        74 ---~~~~~~L~~~~~~~IvP~~NPDGv~~gn--------~R~~~~G~DLNR~w~~p--~~~~~PEv~av~~~i~~~~  137 (261)
T cd06908          74 ---HPIAKVLREHLVFKIVPMLNPDGVFLGN--------YRCSLMGHDLNRHWHDP--SPWAHPTLHAVKNLLKELD  137 (261)
T ss_pred             ---CHHHHHHHHhCcEEEEeeecCcceeecC--------CcCcCcCcCCCCCCCCC--CcccChHHHHHHHHHHHhh
Confidence               7889999999999999999999999863        48889999999999743  3457899999888888764

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL4 and the mouse cytosolic carboxypeptidase (CCP)-6. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal

>cd06242 Peptidase_M14-like_1_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.80  E-value=1.6e-19  Score=185.01  Aligned_cols=123  Identities=25%  Similarity=0.231  Sum_probs=105.8

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCc--cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPV--HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~--~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      ..|...+.+..|.    ++       |||+|++++|++++.  ....||.||++|+|||+||+|++++++++++|+.++ 
T Consensus        18 ~~~~i~~~~~iG~----S~-------eGR~i~~l~is~~~~~~~~~~kp~V~i~~giHg~E~~g~~a~l~ll~~L~~~~-   85 (268)
T cd06242          18 KNDWMSYHSDIGK----SE-------EGRSIPYVYLSTSKSSSSSSKKLRVWLQGGVHGNEPAGDEAALALLGKLDNNP-   85 (268)
T ss_pred             HCCCeEEEEECcc----cc-------CCceeEEEEEecCCccccCCCCCEEEEECCcCCCCHHHHHHHHHHHHHHHhCc-
Confidence            4566555777787    88       999999999997652  356799999999999999999999999999999753 


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                          ...+||++++|+|+|++||||+++..         |.|+.|+||||+|..     ..+||.+.+..+...+
T Consensus        86 ----~~~~lL~~~~i~ivP~~NPDG~~~~~---------R~na~g~DlNRD~~~-----~~~pEtra~~~~~~~~  142 (268)
T cd06242          86 ----KWASVLEKIDIIVLPRYNPDGSAYFQ---------RTLATGYDPNRDHTK-----LARQQTRDIKEAFSKF  142 (268)
T ss_pred             ----hHHHHHhcCeEEEEeccCcchhhhcc---------ccCCcCcccCCCCCc-----ccCHHHHHHHHHHHHh
Confidence                34589999999999999999999876         889999999999954     3589999999988877

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06235 M14_Nna1_like_2 Subgroup of the Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=99.79  E-value=5.6e-19  Score=180.25  Aligned_cols=125  Identities=15%  Similarity=0.206  Sum_probs=105.4

Q ss_pred             eEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC---ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         273 FVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP---VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       273 ~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~---~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      ..++.+..|.    ++       |||+|++|+|++..   ....+||.|++.|++||+||+|+.++++++++|+..    
T Consensus        11 ~~~~~~~iG~----S~-------eGr~i~~l~i~~~~~~~~~~~~k~~V~i~a~iH~~E~~~s~~~~~ll~~Ll~~----   75 (258)
T cd06235          11 QYLKRKILCT----TL-------GGLPVPLLTITSPSSKSIPIKKKKVIVITARQHPGETNSSFVMQGFIDFLLSD----   75 (258)
T ss_pred             CceEEEEeEE----cC-------CCCeeeEEEEeCCcccccccCCCcEEEEECCcCCCChHHHHHHHHHHHHHhcC----
Confidence            3456666666    66       99999999998753   134579999999999999999999999999999864    


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      ++.++.|++++.|+|||++||||+++..        .|.+..|+||||||...  .+..+|+....+.+...+
T Consensus        76 ~~~~~~Ll~~~~~~iiPm~NPDG~~~g~--------~R~n~~GvDLNR~w~~p--~~~~~PE~~~~~~~i~~~  138 (258)
T cd06235          76 SPEAQYLRENFIFKIIPMLNPDGVIHGN--------YRCSLSGIDLNRQWKNP--DKKLHPEIYHVKQLIKKL  138 (258)
T ss_pred             CHHHHHHHhccEEEEEccccccceeecC--------CcCCCCCCCcCCCCCCC--CcccCcHHHHHHHHHHHH
Confidence            4678999999999999999999998632        48899999999999753  245789999999888877

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human Nna1/AGTPBP-1 and AGBL -2, -3, -4, and -5, and the mouse Nna1/CCP-1 and CCP -2 through -6. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induc

>cd06239 Peptidase_M14-like_1_2 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.79  E-value=1.4e-19  Score=180.42  Aligned_cols=121  Identities=21%  Similarity=0.396  Sum_probs=105.9

Q ss_pred             cCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         268 MNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       268 ~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      ++++|..++++..|.    ++       |||+|++|+|++      ++|+|+++|++||+||+|++++++++++|+.+. 
T Consensus         3 ~~~~p~~v~~~~iG~----S~-------eGrpI~~l~ig~------g~~~vli~agiHG~E~~g~~all~ll~~L~~~~-   64 (231)
T cd06239           3 LEKLPAKFKVEVIGK----SV-------EGRPIYSVKFGS------GKIKILLWSQMHGNESTTTKALLDLLNFLGTSK-   64 (231)
T ss_pred             HHHCCCeeEEEEeeE----CC-------CCCeEEEEEEcC------CCcEEEEEeccCCCCHHHHHHHHHHHHHHHHCC-
Confidence            346777888888888    78       999999999986      469999999999999999999999999999865 


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                        ++.++.||++++|+|||++||||+++..         |.|..|+||||+|+..     .+||..++..+..++
T Consensus        65 --~~~~~~ll~~~~v~iiP~lNPDG~~~~~---------R~N~~GvDLNRdf~~~-----s~PEtr~l~~~~~~~  123 (231)
T cd06239          65 --DQEAKKILDEVTLVIIPMLNPDGAEAYT---------RVNANGVDLNRDAQDL-----SQPESRLLRDVYDGF  123 (231)
T ss_pred             --CHHHHHHHhCCEEEEEeccCccHHHHcc---------cCCCcCCcCCCCCCCC-----ChHHHHHHHHHHHhc
Confidence              5566899999999999999999998743         7788899999999743     589999988887775

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06243 Peptidase_M14-like_1_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.78  E-value=3.7e-19  Score=178.22  Aligned_cols=110  Identities=28%  Similarity=0.423  Sum_probs=96.4

Q ss_pred             CCcceEEEEeeCCCcc----CCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcC
Q psy8322         296 ESKDLLVVNISTAPVH----QLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPD  371 (651)
Q Consensus       296 egr~i~~l~is~~~~~----~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpD  371 (651)
                      |||+|++|+|++.+..    ...+|.|++.|++||+||+|++++++++++|+..  + ++.+++||+++.|+|+|++|||
T Consensus         6 eGRpi~~l~i~~~~~~~~~~~~~~p~v~i~~giHG~E~~G~~a~l~ll~~L~~~--~-~~~~~~lL~~~~i~ivP~~NPD   82 (236)
T cd06243           6 RGRPIHLVRVGFAEGPSALDIANRPTVLLVGTQHGDEPAGREALLIIARDLAFG--E-DEELVPLLHQTTVLFVPTANPD   82 (236)
T ss_pred             CCCeeEEEEEecCCCccccccCCCCEEEEECCcCCCChHHHHHHHHHHHHHHhc--C-CHHHHHHHhcceEEEEeCcCcc
Confidence            9999999999986532    3578999999999999999999999999999863  2 7889999999999999999999


Q ss_pred             CceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         372 GSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       372 G~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      |+++.         +|.|++|+||||||+..     .+||.+.+..+..++
T Consensus        83 G~~~~---------~R~n~~g~DlNRd~~~~-----~~pEt~al~~~~~~~  119 (236)
T cd06243          83 GREAD---------TRSNADGIDINRDHLLL-----NTPEAQALASVLRDY  119 (236)
T ss_pred             HhhcC---------CcCCCCCcccCCCCCCC-----CCHHHHHHHHHHHhc
Confidence            99973         58899999999999753     478888888877766

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06236 M14_AGBL5_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-5, and related proteins

Probab=99.75  E-value=5.3e-18  Score=174.40  Aligned_cols=115  Identities=23%  Similarity=0.277  Sum_probs=98.7

Q ss_pred             CCcceEEEEeeCCCcc----------------------CCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhh
Q psy8322         296 ESKDLLVVNISTAPVH----------------------QLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNI  353 (651)
Q Consensus       296 egr~i~~l~is~~~~~----------------------~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v  353 (651)
                      |||+|++|+|++....                      ..+||.||++|++|++||+|+.++++++++|+.++   |+.+
T Consensus        26 eGR~i~lLtITs~~~~~~~~~~~~~~l~~~~~~~~~~~~~~K~~V~I~ariHp~E~~~s~~~~~ll~~Ll~~~---d~~a  102 (304)
T cd06236          26 EGRRIDLLTITSCHGKLEQREPRLEGLFPDRKTPRPHFFFGKPVVFISSRVHPGETPSSFVFNGFLKFLLNKD---DPRA  102 (304)
T ss_pred             CCCceEEEEEecCcccccccccccccccccccccccccccCCcEEEEECCcCCCCchHHHHHHHHHHHHHhCC---CHHH
Confidence            9999999999875421                      25799999999999999999999999999999864   7889


Q ss_pred             hhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHhh
Q psy8322         354 RFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTYA  423 (651)
Q Consensus       354 ~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a  423 (651)
                      +.|+++++|+||||+||||+++.+.        |.+..|+||||+|--.  .+...|+...++.+...+.
T Consensus       103 ~~L~~~~~~~IvPmlNPDGv~~g~~--------R~~~~G~DLNR~y~~p--~~~~~Pei~aik~~i~~~~  162 (304)
T cd06236         103 ALLRRRFVFKLIPMLNPDGVYRGHY--------RTDTRGVNLNRVYLNP--DPELHPSIYAIKKLILYLH  162 (304)
T ss_pred             HHHHhCCeEEEEEeEcccccccCcc--------ccCCcCCCcCcCCCCC--CcccCHHHHHHHHHHHHhh
Confidence            9999999999999999999998653        7899999999987432  3456888888888887663

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the human AGBL5 and the mouse cytosolic carboxypeptidase (CCP)-5. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N-terminal

>cd06241 Peptidase_M14-like_1_4 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.74  E-value=5.2e-18  Score=173.60  Aligned_cols=126  Identities=25%  Similarity=0.263  Sum_probs=103.6

Q ss_pred             EEEEeeCceecccCCCcccCCCCcceEEEEeeCCCc------cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         275 MSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPV------HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       275 ~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~------~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      ++.+..|.    ++       |||+|++|+|+.+..      ...+||.||++|||||+||.|.+++++++++|+.++. 
T Consensus        13 v~~~~iG~----S~-------eGR~i~~l~is~~~~~~~~~~~~~~kp~v~i~agiH~~E~~G~~a~~~ll~~L~~~~~-   80 (266)
T cd06241          13 IRLESFGK----TP-------EGRPLHLLVLSKDGAFTPEEAKRSGKPVVLVQAGIHAGEIDGKDAGLMLLRDLADGKK-   80 (266)
T ss_pred             eEEEEeEe----CC-------CCCeeEEEEEecCCccchhhhcccCCCEEEEeCCcCCCCchHHHHHHHHHHHHHhcch-
Confidence            46666666    66       999999999987541      2357999999999999999999999999999998642 


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccC------CCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS------GRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~------~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                        +   .+|++++|+|||++||||+++....+|..      ...|.|+.|+||||+|+..     .+|+.+++..+...+
T Consensus        81 --~---~ll~~~~i~ivP~~NpDG~~~~~~~~r~~q~gp~~~~~R~na~g~DLNRdf~~~-----~~pEtra~~~~~~~~  150 (266)
T cd06241          81 --D---ALLDKVVLVFIPVFNVDGHERRSPYNRTNQNGPEEYGWRGNARNLNLNRDFIKL-----DAPEMRAFAKLFNKW  150 (266)
T ss_pred             --H---HHHhCCEEEEEeCCCccHHHhcccccccccCCCCccCceecccceecCCCCccc-----CCHHHHHHHHHHHHh
Confidence              2   79999999999999999999876544432      2357889999999999743     479999999888775

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06904 M14_MpaA_like Peptidase M14-like domain of Escherichia coli Murein Peptide Amidase A (MpaA) and related proteins

Probab=99.74  E-value=3.5e-18  Score=165.23  Aligned_cols=143  Identities=25%  Similarity=0.342  Sum_probs=102.1

Q ss_pred             EEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeecc
Q psy8322         318 VKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFL  397 (651)
Q Consensus       318 v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnr  397 (651)
                      |+++|++||+||+|.++++++++.|+..+          |++.+|+|||++||||+++.         .|.+..|+||||
T Consensus         1 vli~agiHG~E~~g~~~~~~l~~~l~~~~----------l~~~~i~ivP~~NPdG~~~~---------~R~n~~gvDLNR   61 (178)
T cd06904           1 VLIIGGIHGDEPASVSDLEELLRILPGLI----------LRGLSWYVIPVLNPDGLLRA---------TRCNANGVDLNR   61 (178)
T ss_pred             CEEEeccCCCCHHHHHHHHHHHHHHHHHh----------hcCCeEEEEeCcCccHHhhC---------cccCCCCcChhh
Confidence            58999999999999999999999998643          78899999999999999983         366778999999


Q ss_pred             CCCCCC-------------CCCCCCCChHHHHHHHHHh-hccCCCCcCCCCCCCCcc------ccccC-cceeccceEec
Q psy8322         398 PFPVTK-------------NKPALTPDTDVFLHLASTY-ARLHPTMHMKRPCPGNTV------LKFEN-GVTNGAAWYSF  456 (651)
Q Consensus       398 nf~~~~-------------~~~~~~~~~~~f~~l~~~~-a~~~~~~~~~~~~~~~~~------~~~~~-gi~n~~~~y~~  456 (651)
                      |||+.+             ....++||++.+..+..++ ....-.+|....|-....      ..+.. ...+.  .|+.
T Consensus        62 nFp~~~~~~~~~~~~~~~G~~~~sepEt~al~~~~~~~~~~~~idlHs~~~~~~~~~~~~~la~~~g~~~~~~~--~~~~  139 (178)
T cd06904          62 NFPTKDWPPGASRYRRYPGPKPGSEPESRALMDLIERFKPDVVVSFHAPLGVLDGDGPNEPLARKFGYLGFDDL--GYPT  139 (178)
T ss_pred             cCCccccccCCCcccccCCCCCCCCHHHHHHHHHHHhcCCeEEEEeCCCCCeecCCCchhHHHHHhCCCccccC--CccC
Confidence            999653             3445677888888777664 122222333221111000      01111 11111  2667


Q ss_pred             cCcccchhhhccceeEEEEEecccC
Q psy8322         457 SGGMADYNYLYHGCLELTLEISCCR  481 (651)
Q Consensus       457 sG~~~D~~y~~~~~~~~T~El~~~~  481 (651)
                      .|++.||++...+++++|+|++.+.
T Consensus       140 ~G~~~~~a~~~~gip~it~Elg~~~  164 (178)
T cd06904         140 PGSLGSWAGVERNIPVITIELPYNL  164 (178)
T ss_pred             CCcHHHHHhhcCCCeEEEEEcCCcc
Confidence            8999999998778999999998655

MpaA is a member of the M14 family of metallocarboxypeptidases (MCPs), however it has an exceptional type of activity, it hydrolyzes the gamma-D-glutamyl-meso-diaminopimelic acid (gamma-D-Glu-Dap) bond in murein peptides. MpaA is specific for cleavage of the gamma-D-Glu-Dap bond of free murein tripeptide; it may also cleave murein tetrapeptide. MpaA has a different substrate specificity and cellular role than endopeptidase I, ENP1 (ENP1 does not belong to this group). MpaA works on free murein peptide in the recycling pathway.

>cd06244 Peptidase_M14-like_1_7 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.73  E-value=8.2e-18  Score=169.54  Aligned_cols=113  Identities=23%  Similarity=0.211  Sum_probs=96.8

Q ss_pred             CCcceEEEEeeCCC-----------------------cc----CCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         296 ESKDLLVVNISTAP-----------------------VH----QLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       296 egr~i~~l~is~~~-----------------------~~----~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      |||+|+++.||+.+                       .+    -..++.|++.++|||+|++|+++++.++++|+.++..
T Consensus         6 eGR~l~~~~Is~~~a~ld~~~~~~~~l~l~dp~~~~~~~~~~~~~~~k~v~~~~~iHg~E~~g~~a~l~ll~~L~~~~~~   85 (268)
T cd06244           6 EGRDIPVVVVAKPEAAVDKYENETLPLMLENPPELADKIEDGTIEDYKPPIINNNIHPDETPGIDAQTELIEELAQEDEI   85 (268)
T ss_pred             CCCeeEEEEEeCcHHHHHHHHHHhhhhhhcCcccchhhhccccccccCeEEEEeCcCCCCHHHHHHHHHHHHHHHhcccc
Confidence            99999999998874                       00    1247788888999999999999999999999988721


Q ss_pred             -------------CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHH
Q psy8322         349 -------------GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVF  415 (651)
Q Consensus       349 -------------~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f  415 (651)
                                   .++++++||+++.|+|+|++||||+++.         +|.|++|+||||||.+.     ..||++.+
T Consensus        86 ~~~~~~~~~~~~~~~~~i~~lL~~~~i~i~P~~NPDG~~~~---------~R~Na~G~DLNRD~~~~-----sqpEt~av  151 (268)
T cd06244          86 EFNTTDADGNEVTETLDVDDLLEKVIFLFNVTENPDGRVAG---------TRENANGFDLNRDNSFQ-----TQPETQAI  151 (268)
T ss_pred             cccccccccccccCCHHHHHHHhcCEEEEEecccCCcceee---------eecCCCccccCCCCCcc-----cCHHHHHH
Confidence                         1788999999999999999999999875         48899999999999753     57899888


Q ss_pred             HHHHHHh
Q psy8322         416 LHLASTY  422 (651)
Q Consensus       416 ~~l~~~~  422 (651)
                      ..+...+
T Consensus       152 ~~~~~~w  158 (268)
T cd06244         152 VALIAEW  158 (268)
T ss_pred             HHHHHHh
Confidence            8887776

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. Th

>cd06240 Peptidase_M14-like_1_3 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.72  E-value=1.1e-17  Score=170.51  Aligned_cols=119  Identities=23%  Similarity=0.210  Sum_probs=95.9

Q ss_pred             CCcceEEEEeeCCCc----------------------------cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         296 ESKDLLVVNISTAPV----------------------------HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       296 egr~i~~l~is~~~~----------------------------~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      |||+|+++.||+...                            ....||.||+.|+|||+||+|++++++++++|+.+  
T Consensus        10 EGR~l~~~~Iss~~n~~~ld~~~~~~~~la~~~~~~~~~a~~~~~~~kp~v~i~~~iHg~E~~g~ea~l~l~~~L~~~--   87 (273)
T cd06240          10 EGRPQIMAAISSPENLAKLDHYKAILRKLADPRGLTEEQARALIAEGKPIVWIDGGLHSTETGGPQMLMELAYRLATE--   87 (273)
T ss_pred             CCCeEEEEEeeChhHhhhHHHHHHHHhhhhccccccchhhhhhhccCCCEEEEECCcCCCchHHHHHHHHHHHHHHhc--
Confidence            999999999986442                            13469999999999999999999999999999985  


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeec-----ccccCC------CCCCCceeEeeccCCCCCCCCCCCCCChHHHH
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVE-----GNCRSG------RGRTPPFLISLFLPFPVTKNKPALTPDTDVFL  416 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~-----~~~~~~------kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~  416 (651)
                       .|++++.||+++.|+|+|++||||+++...     .+...+      .-+.+..|.||||+|-.     ...|+...+.
T Consensus        88 -~d~~~~~lLd~~~i~i~P~~NPDG~er~~~w~~~~~~~~~~~~~~~~~~~~~y~g~DlNRD~~~-----~~~~et~~~~  161 (273)
T cd06240          88 -EDPEIKRILDNVIVLIVPVANPDGRDRVVDWYMRTLGPPKRDRSPLPPLYGKYVGHDNNRDGYM-----NQQETTNNSR  161 (273)
T ss_pred             -CCHHHHHHHhcCEEEEEeCcCCCHHHHhhhhhhhccCCcccCCCCcccccCccCCcCCCcccch-----hcCHHHHHHH
Confidence             289999999999999999999999998542     111111      11445678999998844     3478888888


Q ss_pred             HHHHHh
Q psy8322         417 HLASTY  422 (651)
Q Consensus       417 ~l~~~~  422 (651)
                      .+...|
T Consensus       162 ~~~~~w  167 (273)
T cd06240         162 KLFLEW  167 (273)
T ss_pred             HHHHhc
Confidence            887777

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. T

>cd03857 Peptidase_M14-like_1 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.72  E-value=1.5e-17  Score=167.01  Aligned_cols=109  Identities=30%  Similarity=0.424  Sum_probs=95.2

Q ss_pred             CCcceEEEEeeCCCc------cCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccC
Q psy8322         296 ESKDLLVVNISTAPV------HQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLN  369 (651)
Q Consensus       296 egr~i~~l~is~~~~------~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~N  369 (651)
                      |||+|++++|++...      ...+||.|+++|++||+|+.|.++++.++++|+.+    +...+.+|++..|+|+|++|
T Consensus         6 eGRpi~~~~i~~~~~~~~~~~~~~~k~~v~i~~giHg~E~~g~~a~~~l~~~l~~~----~~~~~~ll~~~~i~ivP~~N   81 (226)
T cd03857           6 EGRPLWMVTLTTAEGMKKRALAKEGKPRVWIDAQIHGNESAGSDALLELLRQLASA----SDEEAKMLENIVIVLIPRAN   81 (226)
T ss_pred             CCCeEEEEEEeCCccccccccccCCCcEEEEECCcCCCCchHHHHHHHHHHHHHhC----CHHHHHHHhCCEEEEEeccC
Confidence            999999999998542      23478999999999999999999999999999864    33458899999999999999


Q ss_pred             cCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         370 PDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       370 pDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      |||+++.+         |.|..|+||||+|+..     .+||...+..+...+
T Consensus        82 PDG~~~~~---------R~n~~g~DLNRd~~~~-----~~pEt~~~~~~~~~~  120 (226)
T cd03857          82 PDGAALFT---------RENANGLDLNRDFLKL-----TQPETRAVREVFIEW  120 (226)
T ss_pred             CChHHhcc---------ccCCCcccCCCCCCCc-----CCHHHHHHHHHHHHc
Confidence            99999874         7888999999999865     478999988888776

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>cd06907 M14_AGBL2-3_like Peptidase M14-like domain of ATP/GTP binding protein_like (AGBL)-2, and related proteins

Probab=99.68  E-value=1.3e-16  Score=160.63  Aligned_cols=124  Identities=15%  Similarity=0.190  Sum_probs=99.9

Q ss_pred             EEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC---ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCC
Q psy8322         274 VMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP---VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGD  350 (651)
Q Consensus       274 ~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~---~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d  350 (651)
                      .++.+..|.    ++       |||+|++|+|++..   .....||.||++|++|+|||.|.-++..++++|+.    .|
T Consensus        13 ~~~~~~lg~----S~-------eGR~i~~LtIt~~~~~~~~~~~K~~I~I~ariHp~E~~~s~~~~gll~~L~~----~~   77 (261)
T cd06907          13 FCKLRVLCR----TL-------AGNTVYLLTITSPSSNPSLAAAKKAVVLTARVHPGETNASWMMKGFLDFLTS----NS   77 (261)
T ss_pred             ceEEEEEEE----CC-------CCCeeeEEEEcCCCccccccCCCCEEEEECCcCCChHHHHHHHHHHHHHHhc----CC
Confidence            355666666    77       99999999998753   12357999999999999999998888888888874    37


Q ss_pred             hhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         351 SNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       351 ~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      +..+.|+++++|+||||+||||+.+.+.        |.+..|+||||+|...+  ....|+.-..+.+...+
T Consensus        78 ~~a~~Lr~~~~f~IvPmlNPDGv~~G~~--------R~~~~G~DLNR~w~~p~--~~~~P~i~~~k~li~~l  139 (261)
T cd06907          78 PDAQLLRDTFIFKIVPMLNPDGVIVGNY--------RCSLAGRDLNRNYKTPL--KDSFPTIWYTKNMVKRL  139 (261)
T ss_pred             HHHHHHHhcCCEEEEEeecCccccccCC--------cCCCcCCCCCcCCCCCC--cccCchHHHHHHHHHHH
Confidence            8899999999999999999999996653        88999999999996443  33567766666666554

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This subgroup includes the human AGBL-2, and -3, and the mouse cytosolic carboxypeptidase (CCPs)-2, and -3. ATP/GTP binding protein (AGTPBP-1/Nna1)-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Mutations in AGTPBP-1/Nna1 cause Purkinje cell degeneration (pcd). AGTPBP-1/Nna1 however does not belong to this subgroup. AGTPBP-1/Nna1-like proteins from the different phyla are highly diverse, but they all contain a unique N-terminal conserved domain right before the CP domain. It has been suggested that this N

>KOG3641|consensus

Probab=99.58  E-value=4.6e-15  Score=157.93  Aligned_cols=169  Identities=19%  Similarity=0.271  Sum_probs=143.0

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcC--CcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYA--NMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILR  100 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p--~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~  100 (651)
                      +.|...+||..|.-+|..|+...+  -+.+...++.|..||++.+++|+..  .-..+|.|++.+.+|++|.-+.+++..
T Consensus       374 faYhypyTy~~l~~hLn~les~~~~~~yfr~dVl~~tl~g~~~~l~tI~~a--e~~~~~~IfLSaRVHpgeTnsSwvmkG  451 (650)
T KOG3641|consen  374 FAYHYPYTYSQLQCHLNGLESPKNPAFYFRYDVLLFTLVGRAMALATIDMA--ECAPRPVIFLSARVHPGETNSSWVMKG  451 (650)
T ss_pred             EeeccCccHHHHHhhhhcccCCCCcCcccchheeeeeecCCccceEEeeHh--hcCCcceEEEecccCCCCCcHHHHHHH
Confidence            678888999999999999987555  3678889999999999999999932  234689999999999999999999999


Q ss_pred             HHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCC
Q psy8322         101 LLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTS  180 (651)
Q Consensus       101 ~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~  180 (651)
                      +++.|+.    .++....|.+.+.|.|+||+||||.-...        .|..-.|.||||.|.              -|.
T Consensus       452 ilefl~s----~~p~aq~LRe~~vFKI~PMLNPDGV~~Gn--------yRCSL~G~DLNR~w~--------------tps  505 (650)
T KOG3641|consen  452 ILEFLVS----NSPLAQGLRESYVFKIVPMLNPDGVIVGN--------YRCSLMGLDLNRMWS--------------TPS  505 (650)
T ss_pred             HHHHhhc----CCcHHHhhhhheeEecccccCCCceeccc--------ceeccccchhhhhcC--------------CCC
Confidence            9999996    47788889999999999999999998654        588899999999996              356


Q ss_pred             CCCcHHHHHHHHHHHhC------CcEEEEEEecCceee-eeccccc
Q psy8322         181 QSIDPEVQAVIDWMNSV------PFVMSLQLHGGNVVA-SYPYDSF  219 (651)
Q Consensus       181 ~~sepEt~al~~~~~~~------~~~~~i~~H~~~~~~-~~P~~~~  219 (651)
                      +.+.|+..+.++++...      ++.+++|+||.++.+ .|=||..
T Consensus       506 ~~shPsi~~~k~li~~l~~~~~~~p~~Y~DlHgHSqK~n~FvYGnv  551 (650)
T KOG3641|consen  506 PASHPSIYAVKQLIQQLSNVPHSRPLGYVDLHGHSQKVNHFVYGNV  551 (650)
T ss_pred             cccchhHHhHHHHHhhhhcccccCceEeecccccccccceEEecCc
Confidence            77999999999988875      488999999987753 2344554

>cd06232 Peptidase_M14-like_5 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.57  E-value=4.2e-15  Score=145.02  Aligned_cols=108  Identities=22%  Similarity=0.182  Sum_probs=85.3

Q ss_pred             CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee
Q psy8322         296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL  375 (651)
Q Consensus       296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~  375 (651)
                      |||+|++|+|+      .+||.||++||+|||||+|.+.++++++.|++            +++++|+|+|++|||||++
T Consensus        25 EGR~I~~l~i~------~~Kp~I~I~gGvHarEwig~~~al~fi~~L~~------------~~~~n~~I~P~vNPDGYe~   86 (240)
T cd06232          25 QGRPVTGRYVA------GLDHPVVISAGQHANETSGVVGALRAAEALAA------------RPGAHFALIPLENPDGYAL   86 (240)
T ss_pred             CCCeeeEEEec------CCCcEEEEeCCcCCCcchhHHHHHHHHHHHhc------------cCCceEEEEEeeCCcHHHh
Confidence            99999999992      26899999999999999999999999999985            5789999999999999998


Q ss_pred             eecccccCCC--------CCCCceeEeec-cCCCCCCCCCCCCCChHHHHHHHHHh-hccCCCCcC
Q psy8322         376 AVEGNCRSGR--------GRTPPFLISLF-LPFPVTKNKPALTPDTDVFLHLASTY-ARLHPTMHM  431 (651)
Q Consensus       376 ~~~~~~~~~k--------gr~~~~gvdln-rnf~~~~~~~~~~~~~~~f~~l~~~~-a~~~~~~~~  431 (651)
                      ..   ++||-        .|.++.|.|+| |.+..       .++.+..+.+...+ ...|-.+|+
T Consensus        87 ~~---~L~r~nP~~~hHaaR~~A~g~D~~fr~~~~-------~~Es~~~~~~~~~~~~~~hiDlHe  142 (240)
T cd06232          87 HE---RLRAEHPRHMHHAARYTALGDDLEYREFPP-------FGEREARHQALAKSGAQLHVNLHG  142 (240)
T ss_pred             hc---hhhccCcccccchhhhcccCCCcccccCCc-------chHHHHHHHHHHhhCCcEEEECCC
Confidence            54   34432        36778888888 74422       47778888887766 233334433

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>cd06231 Peptidase_M14-like_4 A functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.54  E-value=1.4e-14  Score=145.64  Aligned_cols=101  Identities=25%  Similarity=0.344  Sum_probs=84.8

Q ss_pred             CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee
Q psy8322         296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL  375 (651)
Q Consensus       296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~  375 (651)
                      ++++|+++++.+.   ++++|.|++.||+||+||.|.++++++++.+...          ++++.+|+|+|++||||++.
T Consensus        26 ~~~pL~~l~~~~~---~~~~p~vlI~gGiHG~E~~G~~a~l~~l~~l~~~----------~l~~~~i~ivP~vNPdG~~~   92 (236)
T cd06231          26 QSYPLYALKSRGW---DSDLPRVLITAGIHGDEPAGPLGALEFLRAAALE----------LAQDVNLSVYPCINPSGFEA   92 (236)
T ss_pred             CCeeEEEEEcCCC---CCCCCEEEEECCCCCCcHHHHHHHHHHHHHHHHH----------HhcCCeEEEEECcChhHHhc
Confidence            5999999999643   3478999999999999999999999999988642          68899999999999999987


Q ss_pred             eecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         376 AVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       376 ~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      ..         |.|..|+||||+|+..    .++|+...+..+....
T Consensus        93 ~~---------R~n~~g~DLNR~F~~~----~~~~E~~al~~~~~~~  126 (236)
T cd06231          93 IT---------RWNRNGIDPNRSFRSE----SPSPEVRLLMEWLRRL  126 (236)
T ss_pred             Cc---------cCCCCCccccCCCCCC----CCCHHHHHHHHHHHHh
Confidence            44         6778899999999873    3467887777776554

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly differe

>cd00596 Peptidase_M14_like The M14 family of metallocarboxypeptidases (MCPs) are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity

Probab=99.53  E-value=1.1e-14  Score=143.53  Aligned_cols=168  Identities=35%  Similarity=0.523  Sum_probs=131.6

Q ss_pred             EEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee-eecccccCCCCCCCceeEeec
Q psy8322         318 VKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL-AVEGNCRSGRGRTPPFLISLF  396 (651)
Q Consensus       318 v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~-~~~~~~~~~kgr~~~~gvdln  396 (651)
                      |++.|++||+|++|.+++++++++|+..+..    .+.|+++.+|+|+|++||||+++ .+         |.+..|+|||
T Consensus         1 v~i~ag~Hg~E~~g~~~~~~~~~~l~~~~~~----~~~l~~~~~i~iiP~~NPdG~~~~~~---------R~n~~g~DlN   67 (196)
T cd00596           1 VLIIAGIHGNETIGVEAALALLRRLLSNYGR----DTKLLENGRLLVVPVLNPDGYEAVNW---------RKNANGVDLN   67 (196)
T ss_pred             CEEECCcCCCcHHHHHHHHHHHHHHHHcCcc----hHHHHhCCeEEEEeCcccccceeeeE---------EeCCCCcCcc
Confidence            6899999999999999999999999998743    27899999999999999999999 44         5566699999


Q ss_pred             cCCCCCCC-CCCCCCChHHHHHHHHHh-hccCCCCcCC-----CCCCCCc------------cc-------cccCcceec
Q psy8322         397 LPFPVTKN-KPALTPDTDVFLHLASTY-ARLHPTMHMK-----RPCPGNT------------VL-------KFENGVTNG  450 (651)
Q Consensus       397 rnf~~~~~-~~~~~~~~~~f~~l~~~~-a~~~~~~~~~-----~~~~~~~------------~~-------~~~~gi~n~  450 (651)
                      ||||..+. .....|+...+..+...+ ......+|..     -++....            ..       ....+....
T Consensus        68 R~f~~~~~~~~~~~~e~~~~~~~~~~~~~~~~idlH~~~~~~~~p~~~~~~~~~~~~~~~~~a~~~~~~~~~~~~~~~~~  147 (196)
T cd00596          68 RNFPGLWGKGPLSEPETRALAELIQQRKVDLYIDLHSGSLGVLYPYSHSDTPPPDAEIPKALAQLLADAARGSKYGVGFG  147 (196)
T ss_pred             CCCCCcccCCCCCcHHHHHHHHHHHhCCceEEEEEecCCceEEecCCCCCCCCCCHHHHHHHHHHHHHhccCCCCceeec
Confidence            99998865 556788999999888876 2222222221     0111000            00       012355566


Q ss_pred             cceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHH
Q psy8322         451 AAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNA  498 (651)
Q Consensus       451 ~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~a  498 (651)
                      ..||+..|++.||+|...+++++|+|+++++.|+.+.+...|++|+..
T Consensus       148 ~~~~~~~g~~~d~~~~~~~~~~~tiE~g~~~~~~~~~~~~~~~~~~~~  195 (196)
T cd00596         148 AKWYETGGGFDDWAYGNHGCPSFTIELGGQGYPPEEELPSRGEENKEA  195 (196)
T ss_pred             ceEEEcCCchhhhhhhCCCcEEEEEEeCCCCCCCHHHHHHHHHHHHhh
Confidence            667999999999999888999999999999999889999999988764

Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The A forms have slightly different specificities, with Carboxypeptidase A1 (CPA1) preferring

>cd06906 M14_Nna1 Peptidase M14-like domain of Nna-1 (Nervous system Nuclear protein induced by Axotomy), also known as ATP/GTP binding protein (AGTPBP-1) and cytosolic carboxypeptidase (CCP), and related proteins

Probab=99.51  E-value=5.5e-14  Score=142.27  Aligned_cols=113  Identities=19%  Similarity=0.209  Sum_probs=90.4

Q ss_pred             CCcceEEEEeeCCCcc--------CCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEec
Q psy8322         296 ESKDLLVVNISTAPVH--------QLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPN  367 (651)
Q Consensus       296 egr~i~~l~is~~~~~--------~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~  367 (651)
                      +||++.+|+|++.+..        -..||.||+.|.+|++|..|.-++.-++++|+.    .|+..+.|+++++|+||||
T Consensus        25 ~G~~v~lltIt~~~~~~~~~~~~~~~~kp~I~I~ARvHPgEt~~Swi~~g~l~~L~~----~d~~a~~Lr~~~~f~IvPm  100 (278)
T cd06906          25 GGNSCPLLTITAMPESNYYEHICQFRNRPYIFLSARVHPGETNASWVMKGTLEFLMS----SSPTAQSLRESYIFKIVPM  100 (278)
T ss_pred             CCCceeEEEEeCCCccccccccccccCCcEEEEEcccCCCcchHHHHHHHHHHHHhC----CCHHHHHHHHhCcEEEEee
Confidence            8999999999985421        147999999999999998888888888888774    2799999999999999999


Q ss_pred             cCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         368 LNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       368 ~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      +||||+.+.+        .|.+..|+||||+|....  +...|+....+.|....
T Consensus       101 lNPDGvv~Gn--------~Rc~~~G~DLNR~w~~p~--~~~~P~i~~~k~l~~~l  145 (278)
T cd06906         101 LNPDGVINGN--------HRCSLSGEDLNRQWQSPN--PELHPTIYHTKGLLQYL  145 (278)
T ss_pred             ecCccceecc--------cccCCCCCCCCCCCCCCC--cccChHHHHHHHHHHHH
Confidence            9999998665        478889999999997432  22346655566555544

The Peptidase M14 family of metallocarboxypeptidases are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. This eukaryotic subgroup includes the mouse Nna1/CCP-1, and -4 proteins, and the human Nna1/AGTPBP-1 protein. Nna1-like proteins are active metallopeptidases that are thought to act on cytosolic proteins such as alpha-tubulin, to remove a C-terminal tyrosine. Nna1 is widely expressed in the developing and adult nervous systems, including cerebellar Purkinje and granule neurons, miral cells of the olfactory bulb and retinal photoreceptors. Nna1 is also induced in axotomized motor neurons. Mutations in Nna

>PF13715 DUF4480: Domain of unknown function (DUF4480)

Probab=99.43  E-value=1.1e-12  Score=111.74  Aligned_cols=86  Identities=21%  Similarity=0.254  Sum_probs=74.1

Q ss_pred             ceeEEEEcC-CCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEEEEEEeeee
Q psy8322         509 GVKGLVLDE-TGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESLL  587 (651)
Q Consensus       509 ~i~G~V~D~-~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~~~~  587 (651)
                      .|+|+|+|+ +|+||++|+|.+.+.+.++.||++|.|.+.+++|.|+|.+|++||++.+..+.+..+....+++.|.+..
T Consensus         1 ti~G~V~d~~t~~pl~~a~V~~~~~~~~~~Td~~G~F~i~~~~g~~~l~is~~Gy~~~~~~i~~~~~~~~~~~i~L~~~~   80 (88)
T PF13715_consen    1 TISGKVVDSDTGEPLPGATVYLKNTKKGTVTDENGRFSIKLPEGDYTLKISYIGYETKTITISVNSNKNTNLNIYLEPKS   80 (88)
T ss_pred             CEEEEEEECCCCCCccCeEEEEeCCcceEEECCCeEEEEEEcCCCeEEEEEEeCEEEEEEEEEecCCCEEEEEEEEeeCc
Confidence            389999995 5999999999999999999999999996669999999999999999999988886655456899999877


Q ss_pred             eeeEEEE
Q psy8322         588 EFNITMT  594 (651)
Q Consensus       588 ~~~~~v~  594 (651)
                      .++.+|.
T Consensus        81 ~~L~eVv   87 (88)
T PF13715_consen   81 NQLDEVV   87 (88)
T ss_pred             ccCCeEE
Confidence            6655543

>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=99.42  E-value=2.4e-12  Score=131.65  Aligned_cols=117  Identities=30%  Similarity=0.318  Sum_probs=89.8

Q ss_pred             CCHHHHHHHHHHHHHHcCCcEEEEEe---ccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCC-hhHHHHHHHHHHH
Q psy8322          29 HNYDLMREELENFTRVYANMTELYSI---GKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDE-PIGREIILRLLEH  104 (651)
Q Consensus        29 ~~~~ei~~~l~~l~~~~p~~~~~~~i---G~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E-~~g~~~~l~~~~~  104 (651)
                      .+|+|-.+.+.+.++...-.++-+.+   |..-+--+|+++.|+..    ...|.+++++|+||.| .+|+.+++.+++.
T Consensus         3 ~sY~eAR~kFl~aA~~aga~~~~~~~~~~gp~g~~l~i~v~~~g~~----~~~~~l~i~sGvHG~Eg~~Gs~~~~~ll~~   78 (283)
T cd06233           3 QSYAEAREKFLAAAKAAGAALESYVHPLLGPDGEALAIDVARLGPA----DAKRLLVITSGTHGVEGFCGSAIQLALLRE   78 (283)
T ss_pred             ccHHHHHHHHHHHHHHcCccceeeeccCCCCCCceeeeeEEEEcCC----CCCcEEEEEecccCCcccchHHHHHHHHHh
Confidence            47899988888888765544333333   33223336888998864    2356999999999999 7999999998887


Q ss_pred             HHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccC
Q psy8322         105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFR  167 (651)
Q Consensus       105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~  167 (651)
                      +..         +.+..++.|.+||++||.|+...+         |.|.+||||||||-+...
T Consensus        79 ~~~---------~~~~~~~~vi~vh~vNP~Gf~~~~---------R~nedgvDLNRnf~d~~~  123 (283)
T cd06233          79 LLP---------RSLPAGVAVLLVHALNPYGFAHLR---------RVNENNVDLNRNFLDFSA  123 (283)
T ss_pred             cch---------hhccCCceEEEEeCcCHHHHhhcc---------cCCCCCCChhhcccccCC
Confidence            753         245668899999999999998654         889999999999966543

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]

Probab=99.30  E-value=5.9e-12  Score=134.65  Aligned_cols=131  Identities=31%  Similarity=0.453  Sum_probs=94.5

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHcCC-cEEEEEeccccCCc-eEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHH
Q psy8322          19 PAAGMSFGNYHNYDLMREELENFTRVYAN-MTELYSIGKSVLGK-DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGRE   96 (651)
Q Consensus        19 ~~~~~~~~~y~~~~ei~~~l~~l~~~~p~-~~~~~~iG~S~egr-~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~   96 (651)
                      +...+.++.-...++....+.......+. .+.+..+|+|++|| ++++.+-..+    ..++.+++.+++|++   |..
T Consensus        90 ~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~g~sv~GR~~~~i~~~~~~----~~~~~i~~~~~~H~~---g~~  162 (374)
T COG2866          90 PASFMTFTLAPEEGRVEFAFFEPYSLEQHLLVELELIGRSVEGRDDPLITFPESN----PEHKTILITAGQHAR---GEK  162 (374)
T ss_pred             CcccchhhhcccchhhHHhhcccccccccccceeeecCccccccccceeeecCCC----CccceeeEecccccC---ccH
Confidence            34444554433333333333333222222 56788999999999 6665555554    457999999999996   555


Q ss_pred             HHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCc
Q psy8322          97 IILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPD  164 (651)
Q Consensus        97 ~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~  164 (651)
                      .+..++..|+..|...+..++.+++++.++++|.+||||+++.+        .|.|+.|+||||+|+.
T Consensus       163 ~~~~~~~~li~r~~~~~~~~~~lld~~~~~vvp~~NpDG~~~~~--------lr~na~~~dLnr~~~~  222 (374)
T COG2866         163 MVEWFLYNLILRYLDPDVQVRKLLDRADLHVVPNVNPDGSDLGN--------LRTNANGVDLNRNFIA  222 (374)
T ss_pred             HHHHHHHHHHHHhcCccchhhhhhccccEEEecccCCchhhhcc--------cccccCccchhhhccC
Confidence            66666666666663445789999999999999999999999987        5899999999999963

>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases

Probab=99.29  E-value=1.6e-11  Score=131.48  Aligned_cols=97  Identities=29%  Similarity=0.385  Sum_probs=70.9

Q ss_pred             eccccCC--ceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEecc
Q psy8322          54 IGKSVLG--KDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNL  131 (651)
Q Consensus        54 iG~S~eg--r~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~  131 (651)
                      ++++..|  +.|++.+|....    ..|+|+|.|++||+|+.|.+++.++++.|....  .+    ..| +-+|++||++
T Consensus         5 ~~~~~~g~~~~ipv~~~~g~~----~gp~v~i~agiHGdE~~G~~~~~~L~~~l~~~~--~~----~~l-~G~v~ivP~~   73 (359)
T cd06250           5 LPSPAPGTERELTVFRFGGAG----AGPKVYIQASLHADELPGMLVLHHLIELLKKLE--AE----GRI-LGEITLVPVA   73 (359)
T ss_pred             cccCCCCCeEEEEEEEEeCCC----CCCEEEEEeccccCchHHHHHHHHHHHHHhhhc--cc----ccc-CceEEEEeCc
Confidence            4554444  578888887531    259999999999999999999999999998631  11    113 4479999999


Q ss_pred             CcccccccccccccCCCCCC-CccCcCCCCCCCc
Q psy8322         132 NPDGSELAVEGNCRSGRGRN-NINNHDLNRQFPD  164 (651)
Q Consensus       132 NPDG~~~~~~~~r~~~~~r~-n~~GvDLNRnf~~  164 (651)
                      ||+|++.....   ...+|. ...|.||||.||.
T Consensus        74 Np~g~~~~~~~---~~~~R~~p~dg~dlNR~FPg  104 (359)
T cd06250          74 NPIGLNQRLGG---FHLGRFDLASGTNFNRDFPD  104 (359)
T ss_pred             ChHHHHhhccc---cccccccCCCCCccCcCCCC
Confidence            99999753211   112353 4589999999994

This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding

>PF13620 CarboxypepD_reg: Carboxypeptidase regulatory-like domain; PDB: 3MN8_D 3P0D_I 3KCP_A 2B59_B 1UWY_A 1H8L_A 1QMU_A 2NSM_A

Probab=99.24  E-value=2.7e-11  Score=101.63  Aligned_cols=76  Identities=22%  Similarity=0.438  Sum_probs=59.5

Q ss_pred             ceeEEEEcCCCCcccceEEEEee----eeeeeeeCCCeeE-EeeccCceEEEEEEEeeeeeEEE-EEEeeCCCceEEEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAY----KNVSFMSSQRGEY-WRVLMPGIYFIEASKEGYELFRD-RIKIPESTSPVVGAV  582 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~----~~~~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy~~~~~-~v~v~~~~~~~~~~~  582 (651)
                      .|+|+|+|++|+||++|.|.+.+    ....+.||.+|.| +..+++|.|+|.+++.||.+... .+.+..++...++|.
T Consensus         1 tI~G~V~d~~g~pv~~a~V~l~~~~~~~~~~~~Td~~G~f~~~~l~~g~Y~l~v~~~g~~~~~~~~v~v~~~~~~~~~i~   80 (82)
T PF13620_consen    1 TISGTVTDATGQPVPGATVTLTDQDGGTVYTTTTDSDGRFSFEGLPPGTYTLRVSAPGYQPQTQENVTVTAGQTTTVDIT   80 (82)
T ss_dssp             -EEEEEEETTSCBHTT-EEEET--TTTECCEEE--TTSEEEEEEE-SEEEEEEEEBTTEE-EEEEEEEESSSSEEE--EE
T ss_pred             CEEEEEEcCCCCCcCCEEEEEEEeeCCCEEEEEECCCceEEEEccCCEeEEEEEEECCcceEEEEEEEEeCCCEEEEEEE
Confidence            38999999999999999999983    3457889999999 55699999999999999999997 688888877788888


Q ss_pred             Ee
Q psy8322         583 LE  584 (651)
Q Consensus       583 L~  584 (651)
                      |+
T Consensus        81 L~   82 (82)
T PF13620_consen   81 LE   82 (82)
T ss_dssp             EE
T ss_pred             EC
Confidence            85

>cd06230 M14_ASTE_ASPA_like The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3

Probab=99.17  E-value=5.4e-11  Score=121.83  Aligned_cols=103  Identities=30%  Similarity=0.367  Sum_probs=77.1

Q ss_pred             EEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCC
Q psy8322          81 VKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNR  160 (651)
Q Consensus        81 v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNR  160 (651)
                      |+|+||+||+|..|.+++..|++.+...         . .-+.+++++|++||+|++...         |.+.  .||||
T Consensus         1 v~i~agiHG~E~~g~~~~~~l~~~~~~~---------~-~l~g~v~~vp~~N~~g~~~~~---------R~~~--~DLNR   59 (252)
T cd06230           1 VAVVGGVHGNEPCGVQAIRRLLAELDEG---------Q-ALRGPVKLVPAANPLALEAGQ---------RYLD--RDLNR   59 (252)
T ss_pred             CEEEcccCCCcHHHHHHHHHHHHHHhhh---------c-ccccEEEEEeCcCHHHHHhCC---------CCCC--cCCCC
Confidence            5799999999999999999999988652         0 235678999999999998643         5554  99999


Q ss_pred             CCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCC--cEEEEEEecCceeeeeccccc
Q psy8322         161 QFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVP--FVMSLQLHGGNVVASYPYDSF  219 (651)
Q Consensus       161 nf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~--~~~~i~~H~~~~~~~~P~~~~  219 (651)
                      +||-              ......+|.+....+.+...  .++.||+|++.. ...|+...
T Consensus        60 ~fpg--------------~~~~~~~~~~~a~~l~~~i~~~~d~~iDlH~~~~-~~~~~~~~  105 (252)
T cd06230          60 IFPG--------------DPDSGTYEDRLAAELCPELEGLADAVLDLHSTSS-EGPPFILV  105 (252)
T ss_pred             CCCC--------------CCCCCCHHHHHHHHHHHHHhhhccEEEECCCCCC-CCCCEEEE
Confidence            9993              11114566666666665553  699999999876 55666554

5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=99.15  E-value=5.3e-11  Score=124.07  Aligned_cols=118  Identities=25%  Similarity=0.259  Sum_probs=81.0

Q ss_pred             EEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccc
Q psy8322          63 LLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG  142 (651)
Q Consensus        63 i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~  142 (651)
                      |+++.|...    ...|.++|+||+||+|+.|..++..+++.|...           ..+-+++++|++||.|++...  
T Consensus         9 ~pv~~~~g~----~~gp~v~i~~giHGdE~~G~~~~~~l~~~l~~~-----------~~~g~v~~vp~~Np~a~~~~~--   71 (287)
T cd06251           9 IPVHVIRGK----KPGPTLLLTAAIHGDELNGVEIIRRLLRQLDPK-----------TLRGTVIAVPVVNVFGFLNQS--   71 (287)
T ss_pred             eeEEEEeCC----CCCCEEEEEcCccCCchhHHHHHHHHHhcCCcc-----------cCceEEEEEeCCCHHHHHhcc--
Confidence            566666543    124899999999999999999998887776321           123478899999999998643  


Q ss_pred             cccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCce-eeeeccccc
Q psy8322         143 NCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNV-VASYPYDSF  219 (651)
Q Consensus       143 ~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~-~~~~P~~~~  219 (651)
                             |.+..|.||||+||-..               ..++|.+....+++..  ..++.||+|++.. .-..||.+.
T Consensus        72 -------R~~~d~~dlNR~fpg~~---------------~g~~~~~~a~~i~~~~~~~~d~~iDlHs~~~~~~~~~~v~~  129 (287)
T cd06251          72 -------RYLPDRRDLNRSFPGSK---------------NGSLASRIAHLFFTEILSHADYGIDLHTGAIGRTNLPQIRA  129 (287)
T ss_pred             -------ccCCCccCHhhcCCCCC---------------CCCHHHHHHHHHHHHHHhhCCEEEEcCCCCCCCCccceEEE
Confidence                   66668999999998321               2234434333333333  3899999999863 234555543

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=99.15  E-value=8.9e-11  Score=122.49  Aligned_cols=120  Identities=18%  Similarity=0.213  Sum_probs=84.7

Q ss_pred             eEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCccccccccc
Q psy8322          62 DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE  141 (651)
Q Consensus        62 ~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~  141 (651)
                      .|++..|...    ...|.++|+||+||+|+.|..++..|++.|-.       .    .-+.+++++|++||.|++... 
T Consensus         5 ~~pv~~~~g~----~~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~-------~----~~~g~v~~vp~~N~~a~~~~~-   68 (288)
T cd06254           5 AIPVTLINGV----NPGPTLAITAGVHGGEYPGIQALQKLAREIDP-------A----KLSGTLIIVHVLNLSGFYART-   68 (288)
T ss_pred             cccEEEEeCC----CCCCEEEEEecccCCchhHHHHHHHHHHhCCc-------c----cCeEEEEEEeCcCHHHHHhcC-
Confidence            4566666543    13489999999999999999999888877632       1    125579999999999998532 


Q ss_pred             ccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CcEEEEEEecCc-eeeeeccc
Q psy8322         142 GNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV---PFVMSLQLHGGN-VVASYPYD  217 (651)
Q Consensus       142 ~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~---~~~~~i~~H~~~-~~~~~P~~  217 (651)
                            |......|.||||+||-.+              ..  .+++.+..++.+.   +.++.||+|+++ ...+.||.
T Consensus        69 ------r~~~~~d~~dlNR~fpg~~--------------~g--~~~~r~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~~  126 (288)
T cd06254          69 ------PYIVPEDGKNLNRVFPGDK--------------DG--TLTERIAYFLTEEVIDKADFLIDLHSGDGNEQLRPYV  126 (288)
T ss_pred             ------cccCCCCCCchhhcCCCCC--------------CC--CHHHHHHHHHHHHHHhhCcEEEECCCCCCccccCceE
Confidence                  1234568999999999422              11  2345555555432   578999999975 44567776


Q ss_pred             cc
Q psy8322         218 SF  219 (651)
Q Consensus       218 ~~  219 (651)
                      +.
T Consensus       127 ~~  128 (288)
T cd06254         127 YY  128 (288)
T ss_pred             Ee
Confidence            64

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=99.14  E-value=1.9e-10  Score=120.24  Aligned_cols=120  Identities=24%  Similarity=0.304  Sum_probs=81.8

Q ss_pred             ccccCCce--EEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccC
Q psy8322          55 GKSVLGKD--LLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLN  132 (651)
Q Consensus        55 G~S~egr~--i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~N  132 (651)
                      ++...|.+  |+++.|....    ..|.++|+|++||+|..|.+++..+++.|...          .+ +-++.++|++|
T Consensus         3 ~~~~~g~~~~~pv~~~~g~~----~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~~----------~~-~g~~~~vp~~N   67 (293)
T cd06255           3 GTMADGSAVALPVTILRGAE----PGPTLWLHAQVHGNEYNGTQAIVDLYRSLDPA----------AL-KGRLVALPTAN   67 (293)
T ss_pred             ccCCCCCccceeEEEEeCCC----CCCEEEEEcccCCCcHHHHHHHHHHHHhCCHh----------hc-CCeEEEEeCcC
Confidence            44445553  6677776532    24899999999999999999999998887431          12 34778999999


Q ss_pred             cccccccccccccCCCCCCCc-cCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCcee
Q psy8322         133 PDGSELAVEGNCRSGRGRNNI-NNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVV  211 (651)
Q Consensus       133 PDG~~~~~~~~r~~~~~r~n~-~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~  211 (651)
                      |+|+....         |.+. .+.||||.||-.=            ....++..+.++.+.+. ...++.||+|+++..
T Consensus        68 ~~a~~~~~---------R~~p~d~~dlNR~fpg~~------------~g~~~~r~A~~~~~~~~-~~~d~~iDlHs~~~~  125 (293)
T cd06255          68 PTALDART---------RMSPFDELDLNRTFPGNP------------NGMVTQQMAHALFEEVR-GVADYLVDLHTMTTI  125 (293)
T ss_pred             HHHHHhhc---------ccCCCCCCCcccCCCCCC------------CCCHHHHHHHHHHHHHH-hcCCEEEECCCCCCC
Confidence            99998654         6665 8999999998210            00122233333322222 246899999998654

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=98.99  E-value=1e-09  Score=115.95  Aligned_cols=118  Identities=25%  Similarity=0.291  Sum_probs=82.9

Q ss_pred             ceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccc
Q psy8322          61 KDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAV  140 (651)
Q Consensus        61 r~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~  140 (651)
                      -.|++..|....     -|+|+|.||+||+|..|..++.++++.|...           .-+-++.++|++||-|+....
T Consensus        22 ~~iPv~v~~g~~-----gp~v~I~aGiHGdE~~G~~~~~~L~~~l~~~-----------~l~G~vi~vP~~Np~a~~~~~   85 (316)
T cd06252          22 VMIPITVIKNGD-----GPTVLLTGGNHGDEYEGQIALLRLARRLDPE-----------EVRGRVIILPALNFPAVQAGT   85 (316)
T ss_pred             eEeeEEEEeCCC-----CCEEEEEccCCCCchHHHHHHHHHHHhCChh-----------hCeEEEEEEeCCCHHHHHhcc
Confidence            367777776531     4899999999999999999998888877431           124589999999999998543


Q ss_pred             cccccCCCCCCCc-cCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceee-eecc
Q psy8322         141 EGNCRSGRGRNNI-NNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVA-SYPY  216 (651)
Q Consensus       141 ~~~r~~~~~r~n~-~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~-~~P~  216 (651)
                               |.+. .|.||||.||-.               +..+.|.+.-..+.++.  +.++.||+|++.... .+|+
T Consensus        86 ---------R~~p~D~~DLNR~Fpg~---------------~~gs~~~riA~~i~~~l~~~aD~~iDLHt~~~~~~~~p~  141 (316)
T cd06252          86 ---------RTSPIDGGNLNRVFPGD---------------PDGTVTEMIAHYLTTELLPRADYVIDLHSGGRSLDFLPF  141 (316)
T ss_pred             ---------ccCCCCCCcHHhhCCCC---------------CCCCHHHHHHHHHHHhhhhcCcEEEEccCCCCccccCCe
Confidence                     6554 589999999932               12334433333333443  578999999985443 3365


Q ss_pred             cc
Q psy8322         217 DS  218 (651)
Q Consensus       217 ~~  218 (651)
                      ..
T Consensus       142 ~~  143 (316)
T cd06252         142 AL  143 (316)
T ss_pred             EE
Confidence            54

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=98.99  E-value=1.7e-09  Score=113.18  Aligned_cols=121  Identities=27%  Similarity=0.312  Sum_probs=81.5

Q ss_pred             eEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCccccccccc
Q psy8322          62 DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE  141 (651)
Q Consensus        62 ~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~  141 (651)
                      .|..-+++.+      .|.++|+|++||+|..|..++.++++.|....     ....+.-+-++.++|++||.|+.... 
T Consensus         9 ~~~~~~~g~~------gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~~-----~~~~~~l~g~v~~vP~~N~~a~~~~~-   76 (298)
T cd06253           9 RIEGFNFGGG------EKRICIVGGIHGDELQGLYICSLLIRFLKELE-----KRGPLKLNGIVDVIPSVNPLGLNLGT-   76 (298)
T ss_pred             EEEeeecCCC------CcEEEEEccCccchHHHHHHHHHHHHHHhhhh-----cccccccCceEEEEeCcCHHHHHHhh-
Confidence            3555556532      58999999999999999999999999997631     00012236789999999999998543 


Q ss_pred             ccccCCCCCCC-ccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh-C-CcEEEEEEecCcee-eeeccc
Q psy8322         142 GNCRSGRGRNN-INNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNS-V-PFVMSLQLHGGNVV-ASYPYD  217 (651)
Q Consensus       142 ~~r~~~~~r~n-~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~-~-~~~~~i~~H~~~~~-~~~P~~  217 (651)
                              |.. ..|.||||.||-.              . ..++ ++.+...+.+ . ..++.||+|++... ..+|+-
T Consensus        77 --------R~~p~d~~dlNR~Fpg~--------------~-~g~~-~~riA~~~~~~~~~~d~~iDLHsg~~~~~~~p~v  132 (298)
T cd06253          77 --------RFWPTDNSDINRMFPGD--------------P-QGET-TQRIAAAVFEDVKGADYCIDLHSSNIFLEEIPQV  132 (298)
T ss_pred             --------CcCCCCCCcccccCCCC--------------C-CCcH-HHHHHHHHHHHhcCCCEEEEccCCCcccccCCeE
Confidence                    544 3799999999931              1 1122 3333333333 2 47899999997543 224544


Q ss_pred             c
Q psy8322         218 S  218 (651)
Q Consensus       218 ~  218 (651)
                      +
T Consensus       133 ~  133 (298)
T cd06253         133 R  133 (298)
T ss_pred             E
Confidence            3

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>TIGR02994 ectoine_eutE ectoine utilization protein EutE

Probab=98.93  E-value=2.9e-09  Score=112.42  Aligned_cols=116  Identities=23%  Similarity=0.362  Sum_probs=81.6

Q ss_pred             eEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCccccccccc
Q psy8322          62 DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE  141 (651)
Q Consensus        62 ~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~  141 (651)
                      .|++..|..+     .-|+++|.|++||+|+.|..++..|++.|-..           .-+-++++||++||-|+.... 
T Consensus        36 ~ipv~vi~~~-----~gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~-----------~l~G~v~~vP~~N~~g~~~~~-   98 (325)
T TIGR02994        36 MIPITVIKNG-----IGPTALLTGGNHGDEYEGPIALFELARTLDAE-----------DVSGRIIIVPAMNYPAFRAGT-   98 (325)
T ss_pred             EeeEEEEeCC-----CCCEEEEEeccCCCchHHHHHHHHHHhhCChh-----------hCcEEEEEEcCCCHHHHHhhC-
Confidence            4555555432     23899999999999999999999888877431           124579999999999997543 


Q ss_pred             ccccCCCCCCC-ccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHH-hC--CcEEEEEEecCce-eeeecc
Q psy8322         142 GNCRSGRGRNN-INNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMN-SV--PFVMSLQLHGGNV-VASYPY  216 (651)
Q Consensus       142 ~~r~~~~~r~n-~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~-~~--~~~~~i~~H~~~~-~~~~P~  216 (651)
                              |.+ ..|.||||.||              |. +..+. ++.+...+. +.  ..++.||+|+++. .-.+||
T Consensus        99 --------r~~p~d~~nlNR~fP--------------G~-~~gs~-~~riA~~l~~~l~~~aD~~iDlHs~~~~~~~~P~  154 (325)
T TIGR02994        99 --------RTSPIDRGNLNRSFP--------------GR-PDGTV-TEKIADYFQRHLLPLADIVLDFHSGGKTLDFVPF  154 (325)
T ss_pred             --------CCCCCCCCccCCCCC--------------CC-CCCCH-HHHHHHHHHHhHHhhCCEEEECCCCCccccccce
Confidence                    444 37999999999              22 22333 556666663 32  5889999998865 234554


Q ss_pred             cc
Q psy8322         217 DS  218 (651)
Q Consensus       217 ~~  218 (651)
                      ..
T Consensus       155 v~  156 (325)
T TIGR02994       155 AA  156 (325)
T ss_pred             EE
Confidence            43

Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.

>PF10994 DUF2817: Protein of unknown function (DUF2817); InterPro: IPR021259 This family of proteins has no known function

Probab=98.92  E-value=1.2e-08  Score=107.70  Aligned_cols=114  Identities=27%  Similarity=0.273  Sum_probs=89.3

Q ss_pred             CCHHHHHHHHHHHHHHcCCcEEEEEe---ccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCC-hhHHHHHHHHHHH
Q psy8322          29 HNYDLMREELENFTRVYANMTELYSI---GKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDE-PIGREIILRLLEH  104 (651)
Q Consensus        29 ~~~~ei~~~l~~l~~~~p~~~~~~~i---G~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E-~~g~~~~l~~~~~  104 (651)
                      .+|++-.+.+.+.++.....++-+.+   |..-|.--+.++.++...    .+..+++++|.||=| ..|+.+.+.+++.
T Consensus         3 ~sY~~AR~~Fl~aA~~~ga~~~~~~~p~~G~~ge~L~~Dva~lg~~~----a~~lLv~~SGtHGVEGf~GSaiQ~~~L~~   78 (341)
T PF10994_consen    3 QSYAEARERFLAAAEAAGAKLESYPHPLRGPDGEDLATDVAWLGPKD----ASRLLVLTSGTHGVEGFAGSAIQIALLRE   78 (341)
T ss_pred             ccHHHHHHHHHHHHHHcCCcceeeeCCCCCCCCCcceeEEEEecCCC----CCeEEEEEecCCcccccccHHHHHHHHHc
Confidence            48999999888888887765444443   333334466778888642    346889999999999 8888888888887


Q ss_pred             HHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCc
Q psy8322         105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPD  164 (651)
Q Consensus       105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~  164 (651)
                      +..         ..+.+++.+.+|-.+||-|+.+.+         |.|..+|||||||-.
T Consensus        79 ~~~---------~~~~~~~avllVHAlNPyGfa~~R---------R~nE~NVDLNRNfld  120 (341)
T PF10994_consen   79 DLA---------RSLPAGVAVLLVHALNPYGFAWLR---------RVNENNVDLNRNFLD  120 (341)
T ss_pred             ccc---------cccCCCCeEEEEEccCccccceee---------ccCCcCcCcccccCc
Confidence            632         456778999999999999999876         999999999999973

>PF04952 AstE_AspA: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro: IPR007036 This family describes both succinylglutamate desuccinylase that catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway and also includes aspartoacylase 3

Probab=98.91  E-value=1.3e-09  Score=114.22  Aligned_cols=113  Identities=23%  Similarity=0.287  Sum_probs=79.3

Q ss_pred             CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCc-cCcC
Q psy8322          79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNI-NNHD  157 (651)
Q Consensus        79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~-~GvD  157 (651)
                      |.++|+||+||+|+.|..++..+++.|-..-           -.-+++++|++||.|+....         |... .|.|
T Consensus         3 p~l~i~agvHGnE~~G~~a~~~L~~~l~~~~-----------~~G~~~~vp~~N~~a~~~~~---------R~~~~d~~d   62 (292)
T PF04952_consen    3 PTLLITAGVHGNEYNGIEALQRLLRELDPAD-----------LSGTVIIVPVANPPAFRQGT---------RFVPIDGRD   62 (292)
T ss_dssp             -EEEEEE-SSTTBCHHHHHHHHHHHHHHGGG-----------CTCEEEEEEESSHHHHHHTS---------SSSTTTSSB
T ss_pred             CEEEEEcCcccChHHHHHHHHHHHhcchhcc-----------cCCceEEEEEeCHHHHHhcc---------ccCCCCCCC
Confidence            8999999999999999999999988885420           34579999999999999654         5444 8999


Q ss_pred             CCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CcEEEEEEecCceee-eecccc
Q psy8322         158 LNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV---PFVMSLQLHGGNVVA-SYPYDS  218 (651)
Q Consensus       158 LNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~---~~~~~i~~H~~~~~~-~~P~~~  218 (651)
                      |||.||-......       .......-+++.+...+.+.   +.++.||+|+++... .+|+..
T Consensus        63 LNR~Fpg~~~~~~-------~~~~~~~~~~~~ia~~l~~~~~~~aD~~iDLHs~~~~~~~~~~~~  120 (292)
T PF04952_consen   63 LNRCFPGDALGSS-------LQEDYEATETERIAHALFEEILPDADYVIDLHSGSSSSDHPPFVR  120 (292)
T ss_dssp             GGGSTTHHHHCHC-------TTHHHHHHHHHHHHHHHHHTTCCCGSEEEEEEEESSTBEEEEEEE
T ss_pred             HHHhCCCCccccc-------cccccchhHHHHHHHHHhhhhhccceEEEEeccCCCCCccceEEE
Confidence            9999994332200       00011124677777777654   589999999876543 344443

5.1.15 from EC which cleaves acylaspartate into a fatty acid and aspartate. Mutations in P45381 from SWISSPROT lead to Canavan disease [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0008152 metabolic process; PDB: 3CDX_A 3FMC_A 3NA6_A 2BCO_B 3B2Y_A 3LWU_A 3IEH_A 2QVP_B 2G9D_A 1YW4_A ....

>cd06250 M14_PaAOTO_like An uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the the M14 family of metallocarboxypeptidases

Probab=98.84  E-value=4.2e-09  Score=112.84  Aligned_cols=96  Identities=25%  Similarity=0.258  Sum_probs=73.7

Q ss_pred             CCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCc
Q psy8322         294 YGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGS  373 (651)
Q Consensus       294 ~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~  373 (651)
                      .|+.+.|.+.+|+...    ..|+|+++|++||+|+.|.+++.++++.|......  .    .| +-+|+++|++||+|+
T Consensus        10 ~g~~~~ipv~~~~g~~----~gp~v~i~agiHGdE~~G~~~~~~L~~~l~~~~~~--~----~l-~G~v~ivP~~Np~g~   78 (359)
T cd06250          10 PGTERELTVFRFGGAG----AGPKVYIQASLHADELPGMLVLHHLIELLKKLEAE--G----RI-LGEITLVPVANPIGL   78 (359)
T ss_pred             CCCeEEEEEEEEeCCC----CCCEEEEEeccccCchHHHHHHHHHHHHHhhhccc--c----cc-CceEEEEeCcChHHH
Confidence            3567889999996432    36999999999999999999999999999864321  1    13 337999999999999


Q ss_pred             eeeecccccCCCCCCC-ceeEeeccCCCCCC
Q psy8322         374 ELAVEGNCRSGRGRTP-PFLISLFLPFPVTK  403 (651)
Q Consensus       374 ~~~~~~~~~~~kgr~~-~~gvdlnrnf~~~~  403 (651)
                      ....   +.+..+|.+ ..|.||||.||-+.
T Consensus        79 ~~~~---~~~~~~R~~p~dg~dlNR~FPg~~  106 (359)
T cd06250          79 NQRL---GGFHLGRFDLASGTNFNRDFPDLA  106 (359)
T ss_pred             Hhhc---cccccccccCCCCCccCcCCCCcc
Confidence            7543   334445654 47999999999654

This subgroup includes Pseudomonas aeruginosa AotO and related proteins. ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD. The gene encoding

>COG2866 Predicted carboxypeptidase [Amino acid transport and metabolism]

Probab=98.81  E-value=6.3e-09  Score=111.49  Aligned_cols=91  Identities=31%  Similarity=0.499  Sum_probs=80.2

Q ss_pred             CCc-ceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCce
Q psy8322         296 ESK-DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE  374 (651)
Q Consensus       296 egr-~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~  374 (651)
                      +|| ++++.+-..++    .++.|+|.|++|+|   |..++.+++..|+..|...+..++.++++.++|+||.+||||++
T Consensus       131 ~GR~~~~i~~~~~~~----~~~~i~~~~~~H~~---g~~~~~~~~~~li~r~~~~~~~~~~lld~~~~~vvp~~NpDG~~  203 (374)
T COG2866         131 EGRDDPLITFPESNP----EHKTILITAGQHAR---GEKMVEWFLYNLILRYLDPDVQVRKLLDRADLHVVPNVNPDGSD  203 (374)
T ss_pred             cccccceeeecCCCC----ccceeeEecccccC---ccHHHHHHHHHHHHHhcCccchhhhhhccccEEEecccCCchhh
Confidence            888 66666665544    78999999999999   88999999999999998755889999999999999999999999


Q ss_pred             eeecccccCCCCCCCceeEeeccCCCC
Q psy8322         375 LAVEGNCRSGRGRTPPFLISLFLPFPV  401 (651)
Q Consensus       375 ~~~~~~~~~~kgr~~~~gvdlnrnf~~  401 (651)
                      +.+.        |.++.|+||||+|+-
T Consensus       204 ~~~l--------r~na~~~dLnr~~~~  222 (374)
T COG2866         204 LGNL--------RTNANGVDLNRNFIA  222 (374)
T ss_pred             hccc--------ccccCccchhhhccC
Confidence            9975        889999999999943

>cd06233 Peptidase_M14-like_6 Peptidase M14-like domain of a functionally uncharacterized subgroup of the M14 family of metallocarboxypeptidases (MCPs)

Probab=98.81  E-value=9.2e-09  Score=105.47  Aligned_cols=83  Identities=27%  Similarity=0.235  Sum_probs=68.1

Q ss_pred             CCcceEEEEeeCCCccCCCCCeEEEeccccCCC-cchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCce
Q psy8322         296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDE-PIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE  374 (651)
Q Consensus       296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E-~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~  374 (651)
                      |.-+|.++.|+...    ..|.+++.+|+||.| .+|..+++.+++.+...         .+..++.|.+||++||.|+.
T Consensus        36 ~~l~i~v~~~g~~~----~~~~l~i~sGvHG~Eg~~Gs~~~~~ll~~~~~~---------~~~~~~~vi~vh~vNP~Gf~  102 (283)
T cd06233          36 EALAIDVARLGPAD----AKRLLVITSGTHGVEGFCGSAIQLALLRELLPR---------SLPAGVAVLLVHALNPYGFA  102 (283)
T ss_pred             ceeeeeEEEEcCCC----CCcEEEEEecccCCcccchHHHHHHHHHhcchh---------hccCCceEEEEeCcCHHHHh
Confidence            44467788886543    467999999999999 89999999999887532         35668899999999999997


Q ss_pred             eeecccccCCCCCCCceeEeeccCCC
Q psy8322         375 LAVEGNCRSGRGRTPPFLISLFLPFP  400 (651)
Q Consensus       375 ~~~~~~~~~~kgr~~~~gvdlnrnf~  400 (651)
                      ...         |.|..||||||||-
T Consensus       103 ~~~---------R~nedgvDLNRnf~  119 (283)
T cd06233         103 HLR---------RVNENNVDLNRNFL  119 (283)
T ss_pred             hcc---------cCCCCCCChhhccc
Confidence            655         78889999999993

The M14 family are zinc-binding carboxypeptidases (CPs) which hydrolyze single, C-terminal amino acids from polypeptide chains, and have a recognition site for the free C-terminal carboxyl group, which is a key determinant of specificity. Two major subfamilies of the M14 family, defined based on sequence and structural homology, are the A/B and N/E subfamilies. Enzymes belonging to the A/B subfamily are normally synthesized as inactive precursors containing preceding signal peptide, followed by an N-terminal pro-region linked to the enzyme; these proenzymes are called procarboxypeptidases. The A/B enzymes can be further divided based on their substrate specificity; Carboxypeptidase A-like (CPA-like) enzymes favor hydrophobic residues while carboxypeptidase B-like (CPB-like) enzymes only cleave the basic residues lysine or arginine. The

>cd06251 M14_ASTE_ASPA_like_1 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=98.72  E-value=4.4e-08  Score=102.22  Aligned_cols=80  Identities=30%  Similarity=0.258  Sum_probs=59.6

Q ss_pred             ceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeec
Q psy8322         299 DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE  378 (651)
Q Consensus       299 ~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~  378 (651)
                      .|.+..|....    ..|.++++||+||+|+.|..++..+++.|...           .-+-+++++|++||.|+.... 
T Consensus         8 ~~pv~~~~g~~----~gp~v~i~~giHGdE~~G~~~~~~l~~~l~~~-----------~~~g~v~~vp~~Np~a~~~~~-   71 (287)
T cd06251           8 SIPVHVIRGKK----PGPTLLLTAAIHGDELNGVEIIRRLLRQLDPK-----------TLRGTVIAVPVVNVFGFLNQS-   71 (287)
T ss_pred             eeeEEEEeCCC----CCCEEEEEcCccCCchhHHHHHHHHHhcCCcc-----------cCceEEEEEeCCCHHHHHhcc-
Confidence            34555553322    35999999999999999999998888876321           123477899999999997644 


Q ss_pred             ccccCCCCCCCceeEeeccCCCCC
Q psy8322         379 GNCRSGRGRTPPFLISLFLPFPVT  402 (651)
Q Consensus       379 ~~~~~~kgr~~~~gvdlnrnf~~~  402 (651)
                              |....+.||||.||-+
T Consensus        72 --------R~~~d~~dlNR~fpg~   87 (287)
T cd06251          72 --------RYLPDRRDLNRSFPGS   87 (287)
T ss_pred             --------ccCCCccCHhhcCCCC
Confidence                    4444689999999854

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>PRK02259 aspartoacylase; Provisional

Probab=98.63  E-value=6.1e-08  Score=101.07  Aligned_cols=99  Identities=22%  Similarity=0.219  Sum_probs=68.3

Q ss_pred             CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322          79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL  158 (651)
Q Consensus        79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL  158 (651)
                      +.|+|+||+||+|..|.+++..+++.+...         . + .....++|++||.+++...         |..  ..||
T Consensus         3 ~~v~i~aGvHGnE~~Gv~~v~~l~~~~~~~---------~-~-~g~~i~~~i~Np~A~~~~~---------Ry~--~~DL   60 (288)
T PRK02259          3 NRVAIVGGTHGNEITGIYLVKKWQQQPNLI---------N-R-KGLEVQTVIGNPEAIEAGR---------RYI--DRDL   60 (288)
T ss_pred             cEEEEEcCccCChhHHHHHHHHHHhccccc---------c-c-CccEEEEEeeCHHHHHhCC---------CCC--cccC
Confidence            689999999999999999887777765321         1 2 2346788899999998643         432  3799


Q ss_pred             CCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC------CcEEEEEEecCc
Q psy8322         159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV------PFVMSLQLHGGN  209 (651)
Q Consensus       159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~------~~~~~i~~H~~~  209 (651)
                      ||.||-.....          ...+..|.+.-..+....      +.++.||+|++.
T Consensus        61 NR~Fpg~~~~~----------~~~~~~e~~~A~~l~~~~~~~~~~~~D~~iDLHttt  107 (288)
T PRK02259         61 NRSFRLDLLQN----------PDLSGYEQLRAKELVQQLGPKGNSPCDFIIDLHSTT  107 (288)
T ss_pred             CCCCCCccccC----------CCCCCHHHHHHHHHHHHHhhccCccCcEEEECCCCC
Confidence            99999432211          112345555555555544      678999999864

>COG3608 Predicted deacylase [General function prediction only]

Probab=98.61  E-value=1.3e-07  Score=97.91  Aligned_cols=111  Identities=25%  Similarity=0.353  Sum_probs=80.4

Q ss_pred             EEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccc
Q psy8322          63 LLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG  142 (651)
Q Consensus        63 i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~  142 (651)
                      +.++.+++++     -|.+++.|+.||+|.-|+.++.+|++.|-..         +  =.-+++|||.+||-+++...  
T Consensus        38 ~~~~~~~~g~-----gp~~~l~ag~HGdEl~G~~al~~Li~~L~~a---------~--i~GtV~iVP~aN~~a~~~~~--   99 (331)
T COG3608          38 TPVFVFGNGP-----GPSVLLQAGVHGDELPGVIALRRLIPALDPA---------D--ISGTVIIVPIANPPAFEAQG--   99 (331)
T ss_pred             ceEEEecCCC-----CCEEEEEecccccccchHHHHHHHHHhcCHh---------h--cCceEEEEeccCHHHHHhhc--
Confidence            3455555543     4999999999999999999999999988542         1  23589999999999998654  


Q ss_pred             cccCCCCCCC-ccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC---CcEEEEEEecCceeeee
Q psy8322         143 NCRSGRGRNN-INNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV---PFVMSLQLHGGNVVASY  214 (651)
Q Consensus       143 ~r~~~~~r~n-~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~---~~~~~i~~H~~~~~~~~  214 (651)
                             |.. -.+.|+||+||-              ..-  ..-+.++.++++..   ..++.+|+|+++.-..|
T Consensus       100 -------R~~p~d~~N~NR~fPg--------------~~d--gs~t~ria~~l~r~L~~~aD~VlDlHsg~~~~~~  152 (331)
T COG3608         100 -------RFSPGDDTNLNRAFPG--------------RPD--GSATERIADRLKRLLLPLADIVLDLHSGGEGLDY  152 (331)
T ss_pred             -------ccCCCCCCcccccCCC--------------CCC--CCHHHHHHHHHHHhhhcccCEEEEccCCCCcccc
Confidence                   433 378899999991              111  22345666666544   37789999998775444

>TIGR02994 ectoine_eutE ectoine utilization protein EutE

Probab=98.61  E-value=2e-07  Score=98.55  Aligned_cols=206  Identities=16%  Similarity=0.089  Sum_probs=111.3

Q ss_pred             CCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-ceeE
Q psy8322         315 VPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-PFLI  393 (651)
Q Consensus       315 ~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-~~gv  393 (651)
                      .|+++++|++||+|+.|..++.+|++.|-.       .    .-+-.+.+||++||-|.....         |.. ..|.
T Consensus        47 gp~v~i~agvHGdE~~G~~~~~~L~~~l~~-------~----~l~G~v~~vP~~N~~g~~~~~---------r~~p~d~~  106 (325)
T TIGR02994        47 GPTALLTGGNHGDEYEGPIALFELARTLDA-------E----DVSGRIIIVPAMNYPAFRAGT---------RTSPIDRG  106 (325)
T ss_pred             CCEEEEEeccCCCchHHHHHHHHHHhhCCh-------h----hCcEEEEEEcCCCHHHHHhhC---------CCCCCCCC
Confidence            499999999999999999999999998832       1    124569999999998875443         322 3588


Q ss_pred             eeccCCCCCCCCCCCCCChHHHHHHHHH---hhccCCCCcCCCCCCCCcccc----c--------------cCcceec-c
Q psy8322         394 SLFLPFPVTKNKPALTPDTDVFLHLAST---YARLHPTMHMKRPCPGNTVLK----F--------------ENGVTNG-A  451 (651)
Q Consensus       394 dlnrnf~~~~~~~~~~~~~~~f~~l~~~---~a~~~~~~~~~~~~~~~~~~~----~--------------~~gi~n~-~  451 (651)
                      ||||.||-+...   +..++.-..+...   -++-.-.+|.++.+......-    +              .-|.... .
T Consensus       107 nlNR~fPG~~~g---s~~~riA~~l~~~l~~~aD~~iDlHs~~~~~~~~P~v~~~~~~~~~~~~~~~~lA~~fg~p~~~~  183 (325)
T TIGR02994       107 NLNRSFPGRPDG---TVTEKIADYFQRHLLPLADIVLDFHSGGKTLDFVPFAAAHILPDKAQEAKCFDAVAAFAAPYSMK  183 (325)
T ss_pred             ccCCCCCCCCCC---CHHHHHHHHHHHhHHhhCCEEEECCCCCccccccceEEEecCCcchhhHHHHHHHHhcCCCeEEE
Confidence            999999843221   2222222222222   133333344433211111000    0              0011000 0


Q ss_pred             ceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHHHHhhccceeEEEEcCCCCcccceEEEEee
Q psy8322         452 AWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAY  531 (651)
Q Consensus       452 ~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~  531 (651)
                      .....+|++-|.+-...+++++|+|++++..-..+.    -+.-.+.++.++.... -+.|.+     .+.+...+.+..
T Consensus       184 ~~~~~~~gs~~~a~~~~Gip~i~~E~Gg~~~~~~~~----~~~~~~gi~~vL~~lg-ml~~~~-----~~~~~~~~~~~~  253 (325)
T TIGR02994       184 MLEIDSVGMYDTAAEEMGKVFVTTELGGGGTASART----IKIAKRGVRNVLRHAG-ILKGEL-----EIAPTIWLDMPS  253 (325)
T ss_pred             eccCCCCccHHHHHHHCCCeEEEEeCCCCCcCCHHH----HHHHHHHHHHHHHHcC-CcCCCC-----CCCCccceecCC
Confidence            001134567778777788999999998755322111    2223456777665421 233332     111111121122


Q ss_pred             eeeeeeeCCCeeEEeeccCceE
Q psy8322         532 KNVSFMSSQRGEYWRVLMPGIY  553 (651)
Q Consensus       532 ~~~~~~Td~~G~f~~~l~~g~y  553 (651)
                      ...-..+...|.|.....+|..
T Consensus       254 ~~~~v~Ap~~Gi~~~~v~~G~~  275 (325)
T TIGR02994       254 DDCFIFAEDDGLIEFMIDLGDP  275 (325)
T ss_pred             CCeEEEcCCCeEEEEecCCCCE
Confidence            2234567888888666666653

Members of this family, part of the succinylglutamate desuccinylase / aspartoacylase family (pfam04952), belong to ectoine utilization operons, as found in Sinorhizobium meliloti 1021 (where it the operon is known to be induced by ectoine), Mesorhizobium loti, Silicibacter pomeroyi, Agrobacterium tumefaciens, and Pseudomonas putida.

>cd06254 M14_ASTE_ASPA_like_4 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=98.58  E-value=2.3e-07  Score=96.90  Aligned_cols=72  Identities=21%  Similarity=0.162  Sum_probs=55.9

Q ss_pred             CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeE
Q psy8322         314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLI  393 (651)
Q Consensus       314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gv  393 (651)
                      ..|.+++.|++||+|+.|..++..|++.|-       +.    .-+-.++++|++||.|++...       +...+..+.
T Consensus        16 ~gp~v~i~agvHG~E~~G~~~~~~l~~~l~-------~~----~~~g~v~~vp~~N~~a~~~~~-------r~~~~~d~~   77 (288)
T cd06254          16 PGPTLAITAGVHGGEYPGIQALQKLAREID-------PA----KLSGTLIIVHVLNLSGFYART-------PYIVPEDGK   77 (288)
T ss_pred             CCCEEEEEecccCCchhHHHHHHHHHHhCC-------cc----cCeEEEEEEeCcCHHHHHhcC-------cccCCCCCC
Confidence            359999999999999999999999988762       11    125679999999999987532       112345789


Q ss_pred             eeccCCCCCC
Q psy8322         394 SLFLPFPVTK  403 (651)
Q Consensus       394 dlnrnf~~~~  403 (651)
                      ||||.||-+.
T Consensus        78 dlNR~fpg~~   87 (288)
T cd06254          78 NLNRVFPGDK   87 (288)
T ss_pred             chhhcCCCCC
Confidence            9999998653

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd03855 M14_ASTE Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3

Probab=98.57  E-value=3.1e-07  Score=97.19  Aligned_cols=100  Identities=24%  Similarity=0.293  Sum_probs=67.7

Q ss_pred             CCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccC
Q psy8322          76 LGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINN  155 (651)
Q Consensus        76 ~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~G  155 (651)
                      ..-|.|+|+||+||||..|.+++..+++.|....          +.-....++|+.||.++....         |..  .
T Consensus        40 ~~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~~----------l~~~~~v~~~~~Np~A~~~~~---------R~~--d   98 (322)
T cd03855          40 PATKAIVISAGVHGNETAPIEILNQLIKDLLAGE----------LPLAHRLLFIFGNPPAMRAGE---------RFV--D   98 (322)
T ss_pred             CCCCeEEEEccccCCchhHHHHHHHHHHhhhhcc----------ccCCeEEEEEeeCHHHHHhCc---------ccC--C
Confidence            3458999999999999999999999988887521          111233567789999998543         432  3


Q ss_pred             cCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHH-------HHHHHHHhC---CcEEEEEEecC
Q psy8322         156 HDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQ-------AVIDWMNSV---PFVMSLQLHGG  208 (651)
Q Consensus       156 vDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~-------al~~~~~~~---~~~~~i~~H~~  208 (651)
                      .||||.||-.+...            .+..|.+       .+.+++.+.   ..++.+|+|+.
T Consensus        99 ~DLNR~FpG~~~~~------------~~~~E~~rA~~L~~~~~~~~~~~~~~~~d~~iDLHta  149 (322)
T cd03855          99 ENLNRLFSGRHQKD------------EPGPERARAAELEQAVADFFAAGPSGAERWHYDLHTA  149 (322)
T ss_pred             CCccCCCCCCcccC------------CCChHHHHHHHHHHHHHHHHhhcccccCcEEEEccCC
Confidence            59999999433210            1124443       233355444   57999999985

5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.

>cd06256 M14_ASTE_ASPA_like_6 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=98.56  E-value=1.1e-07  Score=100.40  Aligned_cols=97  Identities=25%  Similarity=0.329  Sum_probs=65.7

Q ss_pred             CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322          79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL  158 (651)
Q Consensus        79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL  158 (651)
                      |.|+|+||+||+|..|.+++..+++.+..         .. +...  .+++++||-+++...         |....|.||
T Consensus        35 p~v~I~aGvHGNE~~Gi~al~~ll~~~~~---------~~-~~~~--~~l~i~Np~A~~~~~---------R~~~d~~DL   93 (327)
T cd06256          35 PPLFVSTLLHGNEPTGLQAVQRLLKALEA---------RP-LPRS--LLLFIGNVAAALAGV---------RRLDGQPDY   93 (327)
T ss_pred             CeEEEEccccCCcHHHHHHHHHHHHhCCh---------hh-cCCc--EEEEEeCHHHHHhCc---------ccCCCCCCc
Confidence            89999999999999999999777776542         12 3333  445579999998543         555568899


Q ss_pred             CCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCc
Q psy8322         159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGN  209 (651)
Q Consensus       159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~  209 (651)
                      ||.||-..             ....+-.++.|.+.+.+....+.||+|++.
T Consensus        94 NR~Fpg~~-------------~s~e~r~A~~l~~~l~~~~~d~~IDLHstt  131 (327)
T cd06256          94 NRCWPGPY-------------DDPEGRLAEEVLELLADERPEASIDIHNNT  131 (327)
T ss_pred             cCCCCCCC-------------CCHHHHHHHHHHHHHHhcCCcEEEECCCCC
Confidence            99998211             111223333444444444568999999763

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06909 M14_ASPA Aspartoacylase (ASPA) belongs to the Succinylglutamate desuccinylase/aspartoacylase subfamily of the M14 family of metallocarboxypeptidases

Probab=98.53  E-value=2.5e-07  Score=95.77  Aligned_cols=98  Identities=26%  Similarity=0.265  Sum_probs=64.8

Q ss_pred             CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322          79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL  158 (651)
Q Consensus        79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL  158 (651)
                      +.|+|+||+||+|..|..++..+++.+...           .......++|+.||.+++...         |..  ..||
T Consensus         1 ~~v~I~aGvHGnE~~Gv~~v~~l~~~~~~~-----------~~~~~~v~~~i~Np~A~~~~~---------Ry~--d~DL   58 (282)
T cd06909           1 KRVAIVGGTHGNELTGVYLVKKWLQQPELI-----------QRPSLEVHPVIANPRAVEACR---------RYI--DTDL   58 (282)
T ss_pred             CeEEEEcCccCChHHHHHHHHHHHhccccc-----------ccCCeEEEEEecCHHHHHhCC---------ccC--CCCC
Confidence            468999999999999999887777655321           122334566678999998543         433  5899


Q ss_pred             CCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC------CcEEEEEEecC
Q psy8322         159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV------PFVMSLQLHGG  208 (651)
Q Consensus       159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~------~~~~~i~~H~~  208 (651)
                      ||.||-.....          ...+.+|.+....+....      +.++.||+|++
T Consensus        59 NR~Fpg~~~~~----------~~~~~~e~~~A~~l~~~l~~~~~~~~D~~iDLHst  104 (282)
T cd06909          59 NRCFTLENLSN----------SELLPYEVKRAKELNQKLGPKGNSPCDFVIDLHNT  104 (282)
T ss_pred             CCCCCCCccCC----------CCCCCHHHHHHHHHHHHHhhccCCCceEEEECCCC
Confidence            99999433221          111234555544444433      47899999985

ASPA (also known as aminoacylase 2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06253 M14_ASTE_ASPA_like_3 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=98.50  E-value=5.6e-07  Score=94.32  Aligned_cols=75  Identities=33%  Similarity=0.387  Sum_probs=58.8

Q ss_pred             CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-Ccee
Q psy8322         314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-PPFL  392 (651)
Q Consensus       314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-~~~g  392 (651)
                      +.|+++++|++||+|+.|..++.+++++|......     ..+.-+-++.++|++||-|.....         |. +..+
T Consensus        18 ~gp~v~i~agvHGdE~~G~~~~~~L~~~l~~~~~~-----~~~~l~g~v~~vP~~N~~a~~~~~---------R~~p~d~   83 (298)
T cd06253          18 GEKRICIVGGIHGDELQGLYICSLLIRFLKELEKR-----GPLKLNGIVDVIPSVNPLGLNLGT---------RFWPTDN   83 (298)
T ss_pred             CCcEEEEEccCccchHHHHHHHHHHHHHHhhhhcc-----cccccCceEEEEeCcCHHHHHHhh---------CcCCCCC
Confidence            46999999999999999999999999999754311     012237899999999999987533         43 3468


Q ss_pred             EeeccCCCCC
Q psy8322         393 ISLFLPFPVT  402 (651)
Q Consensus       393 vdlnrnf~~~  402 (651)
                      .||||.||-+
T Consensus        84 ~dlNR~Fpg~   93 (298)
T cd06253          84 SDINRMFPGD   93 (298)
T ss_pred             CcccccCCCC
Confidence            9999999854

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06252 M14_ASTE_ASPA_like_2 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=98.49  E-value=7.4e-07  Score=94.29  Aligned_cols=68  Identities=35%  Similarity=0.376  Sum_probs=55.0

Q ss_pred             CCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCc-eeE
Q psy8322         315 VPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPP-FLI  393 (651)
Q Consensus       315 ~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~-~gv  393 (651)
                      .|+|+++||+||+|..|..++.+++++|...           .-+-.+.++|++||-|+....         |... .+.
T Consensus        34 gp~v~I~aGiHGdE~~G~~~~~~L~~~l~~~-----------~l~G~vi~vP~~Np~a~~~~~---------R~~p~D~~   93 (316)
T cd06252          34 GPTVLLTGGNHGDEYEGQIALLRLARRLDPE-----------EVRGRVIILPALNFPAVQAGT---------RTSPIDGG   93 (316)
T ss_pred             CCEEEEEccCCCCchHHHHHHHHHHHhCChh-----------hCeEEEEEEeCCCHHHHHhcc---------ccCCCCCC
Confidence            5899999999999999999999999887321           125589999999999997543         4443 579


Q ss_pred             eeccCCCCC
Q psy8322         394 SLFLPFPVT  402 (651)
Q Consensus       394 dlnrnf~~~  402 (651)
                      ||||.||-+
T Consensus        94 DLNR~Fpg~  102 (316)
T cd06252          94 NLNRVFPGD  102 (316)
T ss_pred             cHHhhCCCC
Confidence            999999854

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06910 M14_ASTE_ASPA_like_7 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=98.48  E-value=2.3e-07  Score=96.08  Aligned_cols=112  Identities=20%  Similarity=0.133  Sum_probs=69.6

Q ss_pred             CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322          79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL  158 (651)
Q Consensus        79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL  158 (651)
                      |.++|.|++||+|..|.+++..+++.        ++  .. +. .++.++ ++||-++....   |+... -..-.+.||
T Consensus         1 P~v~isagvHGnE~~Gi~al~~l~~~--------~~--~~-l~-G~li~~-~~N~~A~~~~~---~~~p~-~~R~~~~dL   63 (272)
T cd06910           1 PHVMINALVHGNEICGAIALDALLRE--------GL--RP-RR-GRLTLA-FANVAAYARFD---PNNPT-ASRFVDEDM   63 (272)
T ss_pred             CEEEEEcCcccChHHHHHHHHHHHhC--------cc--cc-cC-CCEEEE-EECHHHHHhcc---cCCCc-ccccCCCCc
Confidence            78999999999999999999777763        11  11 33 355566 89999997432   11000 011225799


Q ss_pred             CCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccc
Q psy8322         159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSF  219 (651)
Q Consensus       159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~  219 (651)
                      ||.||-.+..+         +.  ...|.+.-..+..-. ..++.||+|++.. -.+||...
T Consensus        64 NR~Fpg~~~~g---------~~--~~~e~~~A~~l~~~i~~aD~~iDLHt~~~-~~~p~~~~  113 (272)
T cd06910          64 NRVWSPDVLDG---------PR--DSIELRRARELRPVIDTADYLLDLHSMQW-PSPPLILA  113 (272)
T ss_pred             CCCCCCcccCC---------Cc--ccHHHHHHHHHHHHHhhCCEEEECCCCCC-CCCCEEEe
Confidence            99999443221         11  235555544443222 4779999999877 35666653

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>PRK05324 succinylglutamate desuccinylase; Provisional

Probab=98.45  E-value=9e-07  Score=93.83  Aligned_cols=100  Identities=21%  Similarity=0.204  Sum_probs=66.2

Q ss_pred             CCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccC
Q psy8322          76 LGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINN  155 (651)
Q Consensus        76 ~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~G  155 (651)
                      ...|.|+|+||+||||..|.+++..+++.|...         .+.-..+ .++|++||.++....         |..  .
T Consensus        45 ~~gp~v~IsaGvHGNE~~Gi~~l~~Ll~~l~~~---------~~~~~~~-v~~i~~Np~A~~~~~---------R~v--d  103 (329)
T PRK05324         45 PSTKALVLSAGIHGNETAPIELLDQLVRDLLAG---------ELPLRAR-LLVILGNPPAMRAGK---------RYL--D  103 (329)
T ss_pred             CCCCeEEEECCcccCcHHHHHHHHHHHHhhhcc---------ccccCce-EEEEecCHHHHHhCc---------ccC--C
Confidence            345899999999999999999999988888652         1111223 555589999998533         433  4


Q ss_pred             cCCCCCCCcccCCCCCCCCCCCCCCCCCcHHH---HHHHHHHHh----C--CcEEEEEEecC
Q psy8322         156 HDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEV---QAVIDWMNS----V--PFVMSLQLHGG  208 (651)
Q Consensus       156 vDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt---~al~~~~~~----~--~~~~~i~~H~~  208 (651)
                      .||||.||-.+...            .+.+|.   +.|.+.+..    .  ..++.+|+|+.
T Consensus       104 ~DLNR~FpG~~~~~------------~~~~E~~rA~~L~~~i~~~~~~~~~~~D~~iDLHta  153 (329)
T PRK05324        104 EDLNRLFGGRHQQF------------PGSDEARRAAELEQAVEDFFAAGAERVRWHYDLHTA  153 (329)
T ss_pred             CCcccCCCCCcCCC------------CCcHHHHHHHHHHHHHHHHhcccCccceEEEECCCC
Confidence            69999999544322            111254   233332222    1  36799999973

>cd06230 M14_ASTE_ASPA_like The Peptidase M14 Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily belongs to the M14 family of metallocarboxypeptidases (MCPs), and includes ASTE, which catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3

Probab=98.43  E-value=4.1e-07  Score=93.24  Aligned_cols=82  Identities=29%  Similarity=0.340  Sum_probs=59.8

Q ss_pred             EEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeecc
Q psy8322         318 VKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFL  397 (651)
Q Consensus       318 v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnr  397 (651)
                      |++.||+||+|+.|.+++..+++.+....         . -+.+++++|++||+|++...         |.+.  .||||
T Consensus         1 v~i~agiHG~E~~g~~~~~~l~~~~~~~~---------~-l~g~v~~vp~~N~~g~~~~~---------R~~~--~DLNR   59 (252)
T cd06230           1 VAVVGGVHGNEPCGVQAIRRLLAELDEGQ---------A-LRGPVKLVPAANPLALEAGQ---------RYLD--RDLNR   59 (252)
T ss_pred             CEEEcccCCCcHHHHHHHHHHHHHHhhhc---------c-cccEEEEEeCcCHHHHHhCC---------CCCC--cCCCC
Confidence            57999999999999999999999886421         2 25678999999999998644         3333  99999


Q ss_pred             CCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         398 PFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       398 nf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      +||-...  ..+++...-..+....
T Consensus        60 ~fpg~~~--~~~~~~~~a~~l~~~i   82 (252)
T cd06230          60 IFPGDPD--SGTYEDRLAAELCPEL   82 (252)
T ss_pred             CCCCCCC--CCCHHHHHHHHHHHHH
Confidence            9985432  1245555545554433

5.1.15) which cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd06255 M14_ASTE_ASPA_like_5 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=98.31  E-value=8.2e-07  Score=92.91  Aligned_cols=83  Identities=27%  Similarity=0.346  Sum_probs=62.8

Q ss_pred             CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee
Q psy8322         296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL  375 (651)
Q Consensus       296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~  375 (651)
                      +.-.|.+..|....    ..|.+++.|++||+|..|.+++..+++.|...          .+ +-++.++|++||.|+..
T Consensus         9 ~~~~~pv~~~~g~~----~gp~v~i~agvHG~E~~G~~~~~~l~~~l~~~----------~~-~g~~~~vp~~N~~a~~~   73 (293)
T cd06255           9 SAVALPVTILRGAE----PGPTLWLHAQVHGNEYNGTQAIVDLYRSLDPA----------AL-KGRLVALPTANPTALDA   73 (293)
T ss_pred             CccceeEEEEeCCC----CCCEEEEEcccCCCcHHHHHHHHHHHHhCCHh----------hc-CCeEEEEeCcCHHHHHh
Confidence            33346666664432    35999999999999999999999999887321          12 34778999999999987


Q ss_pred             eecccccCCCCCCCc-eeEeeccCCCCC
Q psy8322         376 AVEGNCRSGRGRTPP-FLISLFLPFPVT  402 (651)
Q Consensus       376 ~~~~~~~~~kgr~~~-~gvdlnrnf~~~  402 (651)
                      ..         |.+. .+.||||.||-+
T Consensus        74 ~~---------R~~p~d~~dlNR~fpg~   92 (293)
T cd06255          74 RT---------RMSPFDELDLNRTFPGN   92 (293)
T ss_pred             hc---------ccCCCCCCCcccCCCCC
Confidence            65         5554 789999999854

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>TIGR03242 arg_catab_astE succinylglutamate desuccinylase

Probab=98.25  E-value=3e-06  Score=89.66  Aligned_cols=67  Identities=28%  Similarity=0.333  Sum_probs=50.0

Q ss_pred             CCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCc
Q psy8322          77 GVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNH  156 (651)
Q Consensus        77 ~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~Gv  156 (651)
                      .-|.|+|+||+||||..|.+++..+++.+...         .+.-..++.++ ++||.++....         |..  ..
T Consensus        40 ~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~---------~~~~~~~l~~i-~~Np~A~~~~~---------R~~--~~   98 (319)
T TIGR03242        40 PQKSLVISAGIHGNETAPIEILEQLLGDIAAG---------KLPLRVRLLVI-LGNPPAMRTGK---------RYL--HD   98 (319)
T ss_pred             CCCEEEEEcCcccchHHHHHHHHHHHhhhhhc---------cccCCceEEEE-EcCHHHHHhCc---------ccC--CC
Confidence            34899999999999999999998888887642         12223455444 79999998543         433  46


Q ss_pred             CCCCCCCc
Q psy8322         157 DLNRQFPD  164 (651)
Q Consensus       157 DLNRnf~~  164 (651)
                      ||||.||-
T Consensus        99 DLNR~FpG  106 (319)
T TIGR03242        99 DLNRMFGG  106 (319)
T ss_pred             CccCCCCC
Confidence            99999983

Members of this protein family are succinylglutamate desuccinylase, the fifth and final enzyme of the arginine succinyltransferase (AST) pathway for arginine catabolism. This model excludes the related protein aspartoacylase.

>PF04952 AstE_AspA: Succinylglutamate desuccinylase / Aspartoacylase family; InterPro: IPR007036 This family describes both succinylglutamate desuccinylase that catalyses the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway and also includes aspartoacylase 3

Probab=98.01  E-value=4.1e-06  Score=87.79  Aligned_cols=67  Identities=27%  Similarity=0.237  Sum_probs=54.3

Q ss_pred             CCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-ceeE
Q psy8322         315 VPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-PFLI  393 (651)
Q Consensus       315 ~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-~~gv  393 (651)
                      -|+++++|++||+|+.|..++..++++|-...           -.-++.++|++||.|+....         |.. ..|.
T Consensus         2 Gp~l~i~agvHGnE~~G~~a~~~L~~~l~~~~-----------~~G~~~~vp~~N~~a~~~~~---------R~~~~d~~   61 (292)
T PF04952_consen    2 GPTLLITAGVHGNEYNGIEALQRLLRELDPAD-----------LSGTVIIVPVANPPAFRQGT---------RFVPIDGR   61 (292)
T ss_dssp             S-EEEEEE-SSTTBCHHHHHHHHHHHHHHGGG-----------CTCEEEEEEESSHHHHHHTS---------SSSTTTSS
T ss_pred             CCEEEEEcCcccChHHHHHHHHHHHhcchhcc-----------cCCceEEEEEeCHHHHHhcc---------ccCCCCCC
Confidence            38999999999999999999999999885432           34589999999999988666         433 4789


Q ss_pred             eeccCCCC
Q psy8322         394 SLFLPFPV  401 (651)
Q Consensus       394 dlnrnf~~  401 (651)
                      ||||.||-
T Consensus        62 dLNR~Fpg   69 (292)
T PF04952_consen   62 DLNRCFPG   69 (292)
T ss_dssp             BGGGSTTH
T ss_pred             CHHHhCCC
Confidence            99999984

5.1.15 from EC which cleaves acylaspartate into a fatty acid and aspartate. Mutations in P45381 from SWISSPROT lead to Canavan disease [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0008152 metabolic process; PDB: 3CDX_A 3FMC_A 3NA6_A 2BCO_B 3B2Y_A 3LWU_A 3IEH_A 2QVP_B 2G9D_A 1YW4_A ....

>PF08400 phage_tail_N: Prophage tail fibre N-terminal; InterPro: IPR013609 This entry represents the N terminus of phage 933W tail fibre protein

Probab=97.81  E-value=0.0001  Score=66.70  Aligned_cols=66  Identities=24%  Similarity=0.409  Sum_probs=55.5

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee----------eeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEE-EEEeeCC
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN----------VSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRD-RIKIPES  574 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~----------~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~-~v~v~~~  574 (651)
                      .|+|+.+|..|+|++|++|.|+-..          ....|++.|.|...+.||.|.|.+...|+.+... .|.|...
T Consensus         4 ~ISGvL~dg~G~pv~g~~I~L~A~~tS~~Vv~~t~as~~t~~~G~Ys~~~epG~Y~V~l~~~g~~~~~vG~I~V~~d   80 (134)
T PF08400_consen    4 KISGVLKDGAGKPVPGCTITLKARRTSSTVVVGTVASVVTGEAGEYSFDVEPGVYRVTLKVEGRPPVYVGDITVYED   80 (134)
T ss_pred             EEEEEEeCCCCCcCCCCEEEEEEccCchheEEEEEEEEEcCCCceEEEEecCCeEEEEEEECCCCceeEEEEEEecC
Confidence            4999999999999999999998533          2447899999999999999999999999977664 5666543

The characteristics of the protein distribution suggest prophage matches.

>COG3608 Predicted deacylase [General function prediction only]

Probab=97.78  E-value=0.00013  Score=76.06  Aligned_cols=68  Identities=26%  Similarity=0.261  Sum_probs=52.9

Q ss_pred             CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeE
Q psy8322         314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLI  393 (651)
Q Consensus       314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gv  393 (651)
                      ..|.++++++.||+|.-|..++.+|+++|-..-           =.-+++|||.+||=+.+...   |     +.+..+.
T Consensus        47 ~gp~~~l~ag~HGdEl~G~~al~~Li~~L~~a~-----------i~GtV~iVP~aN~~a~~~~~---R-----~~p~d~~  107 (331)
T COG3608          47 PGPSVLLQAGVHGDELPGVIALRRLIPALDPAD-----------ISGTVIIVPIANPPAFEAQG---R-----FSPGDDT  107 (331)
T ss_pred             CCCEEEEEecccccccchHHHHHHHHHhcCHhh-----------cCceEEEEeccCHHHHHhhc---c-----cCCCCCC
Confidence            469999999999999999999999999984322           13589999999976655443   1     2233667


Q ss_pred             eeccCCC
Q psy8322         394 SLFLPFP  400 (651)
Q Consensus       394 dlnrnf~  400 (651)
                      ++||.||
T Consensus       108 N~NR~fP  114 (331)
T COG3608         108 NLNRAFP  114 (331)
T ss_pred             cccccCC
Confidence            8999998

>cd06909 M14_ASPA Aspartoacylase (ASPA) belongs to the Succinylglutamate desuccinylase/aspartoacylase subfamily of the M14 family of metallocarboxypeptidases

Probab=97.39  E-value=0.00074  Score=70.10  Aligned_cols=66  Identities=23%  Similarity=0.170  Sum_probs=47.0

Q ss_pred             CeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEee
Q psy8322         316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISL  395 (651)
Q Consensus       316 p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdl  395 (651)
                      +.|++.||+||+|..|..++..+++.+...           .......++|+.||-+++...         |..  ..||
T Consensus         1 ~~v~I~aGvHGnE~~Gv~~v~~l~~~~~~~-----------~~~~~~v~~~i~Np~A~~~~~---------Ry~--d~DL   58 (282)
T cd06909           1 KRVAIVGGTHGNELTGVYLVKKWLQQPELI-----------QRPSLEVHPVIANPRAVEACR---------RYI--DTDL   58 (282)
T ss_pred             CeEEEEcCccCChHHHHHHHHHHHhccccc-----------ccCCeEEEEEecCHHHHHhCC---------ccC--CCCC
Confidence            468999999999999999888888765321           122334566678999986533         322  3799


Q ss_pred             ccCCCCCC
Q psy8322         396 FLPFPVTK  403 (651)
Q Consensus       396 nrnf~~~~  403 (651)
                      ||-||-..
T Consensus        59 NR~Fpg~~   66 (282)
T cd06909          59 NRCFTLEN   66 (282)
T ss_pred             CCCCCCCc
Confidence            99998543

ASPA (also known as aminoacylase 2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>PRK15036 hydroxyisourate hydrolase; Provisional

Probab=97.35  E-value=0.00043  Score=63.64  Aligned_cols=57  Identities=19%  Similarity=0.215  Sum_probs=48.7

Q ss_pred             cceeEEEEc-CCCCcccceEEEEeeee-------eeeeeCCCeeEEe-----eccCceEEEEEEEeeeee
Q psy8322         508 RGVKGLVLD-ETGSRLANVSISLAYKN-------VSFMSSQRGEYWR-----VLMPGIYFIEASKEGYEL  564 (651)
Q Consensus       508 ~~i~G~V~D-~~g~pi~~A~V~i~~~~-------~~~~Td~~G~f~~-----~l~~g~y~l~vs~~Gy~~  564 (651)
                      ..|++.|.| .+|.|++|+.|.|....       ..+.||.||+|..     .+++|.|+|++...+|-.
T Consensus        27 ~~Is~HVLDt~~G~PA~gV~V~L~~~~~~~w~~l~~~~Td~dGR~~~l~~~~~~~~G~Y~L~F~t~~Yf~   96 (137)
T PRK15036         27 NILSVHILNQQTGKPAADVTVTLEKKADNGWLQLNTAKTDKDGRIKALWPEQTATTGDYRVVFKTGDYFK   96 (137)
T ss_pred             CCeEEEEEeCCCCcCCCCCEEEEEEccCCceEEEEEEEECCCCCCccccCcccCCCeeEEEEEEcchhhh
Confidence            359999999 78999999999998754       5678999999932     378899999999999965

>COG2988 Succinylglutamate desuccinylase [Amino acid transport and metabolism]

Probab=97.34  E-value=0.00053  Score=69.17  Aligned_cols=112  Identities=20%  Similarity=0.190  Sum_probs=71.4

Q ss_pred             CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322          79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL  158 (651)
Q Consensus        79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL  158 (651)
                      ..+.|+|||||||..+.+++-.++..+..++   -|      -..++.+| +-||--.+...           ...--||
T Consensus        44 ~~lvIsaGiHGNEtapvEll~kl~~~~~ag~---~p------~a~r~L~i-lgNP~Ai~~gk-----------RYieqDl  102 (324)
T COG2988          44 GSLVISAGIHGNETAPVELLDKLQQKISAGQ---LP------LAWRCLVI-LGNPPAIAAGK-----------RYIEQDL  102 (324)
T ss_pred             CceEEEecccCCccCcHHHHHHHHhhhhhcc---cC------cceeEEEE-ecCcHHHHhch-----------HHHhhhH
Confidence            3799999999999999999998888888753   11      13345555 78998777432           2234599


Q ss_pred             CCCCCcccCCCCCCCCCCCCCCCCCcHHH-HHHHHHHHhC--CcEEEEEEec------Cceeeeecccc
Q psy8322         159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEV-QAVIDWMNSV--PFVMSLQLHG------GNVVASYPYDS  218 (651)
Q Consensus       159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt-~al~~~~~~~--~~~~~i~~H~------~~~~~~~P~~~  218 (651)
                      ||.|...|....       +...++.-|- +++..++..-  ++.+.+|+|.      -.++.++||..
T Consensus       103 NR~F~gr~q~~~-------~ne~~ra~eler~~q~ff~~~~~~vr~h~DLHtairgs~h~~f~~~P~~~  164 (324)
T COG2988         103 NRMFGGRPQSFS-------ENETLRAYELERALQDFFQQGKESVRWHLDLHTAIRGSGHPQFGVLPQPD  164 (324)
T ss_pred             HHHhCCCcccCC-------CCchhhhHHHHHHHHHHHhcCCCcceEEEEhhhhhhccCCcceeeCCCCC
Confidence            999987665431       1112222332 3444444433  5899999995      23344555544

>PF08308 PEGA: PEGA domain; InterPro: IPR013229 This domain is found in both archaea and bacteria and has similarity to S-layer (surface layer) proteins

Probab=97.21  E-value=0.0015  Score=52.96  Aligned_cols=60  Identities=18%  Similarity=0.311  Sum_probs=49.0

Q ss_pred             cceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEEEEEEeee
Q psy8322         523 ANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESL  586 (651)
Q Consensus       523 ~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~~~  586 (651)
                      ++|.|+|.|...+ .|..   -...+++|.|+|++++.||++.+..+.+..++...+++.|++.
T Consensus        11 ~gA~V~vdg~~~G-~tp~---~~~~l~~G~~~v~v~~~Gy~~~~~~v~v~~~~~~~v~~~L~~~   70 (71)
T PF08308_consen   11 SGAEVYVDGKYIG-TTPL---TLKDLPPGEHTVTVEKPGYEPYTKTVTVKPGETTTVNVTLEPQ   70 (71)
T ss_pred             CCCEEEECCEEec-cCcc---eeeecCCccEEEEEEECCCeeEEEEEEECCCCEEEEEEEEEEC
Confidence            5899999887766 2221   1334899999999999999999999999988888899988863

It is named after the characteristic PEGA sequence motif found in this domain. The secondary structure of this domain is predicted to be beta-strands.

>PRK02259 aspartoacylase; Provisional

Probab=97.12  E-value=0.00052  Score=71.68  Aligned_cols=65  Identities=22%  Similarity=0.117  Sum_probs=48.6

Q ss_pred             CeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEee
Q psy8322         316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISL  395 (651)
Q Consensus       316 p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdl  395 (651)
                      +.|++.||+||+|..|.+++..+++.+...         . + .....++|+.||.++....         |..  ..||
T Consensus         3 ~~v~i~aGvHGnE~~Gv~~v~~l~~~~~~~---------~-~-~g~~i~~~i~Np~A~~~~~---------Ry~--~~DL   60 (288)
T PRK02259          3 NRVAIVGGTHGNEITGIYLVKKWQQQPNLI---------N-R-KGLEVQTVIGNPEAIEAGR---------RYI--DRDL   60 (288)
T ss_pred             cEEEEEcCccCChhHHHHHHHHHHhccccc---------c-c-CccEEEEEeeCHHHHHhCC---------CCC--cccC
Confidence            689999999999999999888888765321         0 1 2345788899999987644         322  2699


Q ss_pred             ccCCCCC
Q psy8322         396 FLPFPVT  402 (651)
Q Consensus       396 nrnf~~~  402 (651)
                      ||.||-+
T Consensus        61 NR~Fpg~   67 (288)
T PRK02259         61 NRSFRLD   67 (288)
T ss_pred             CCCCCCc
Confidence            9999854

>KOG3641|consensus

Probab=97.06  E-value=0.0019  Score=70.49  Aligned_cols=111  Identities=20%  Similarity=0.270  Sum_probs=82.5

Q ss_pred             CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee
Q psy8322         296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL  375 (651)
Q Consensus       296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~  375 (651)
                      .||++.++.|...  +-..+|.|++.+-+|.+|.-+.-++--++++|+.+    ++....|-+..-+-|+||+||||-..
T Consensus       412 ~g~~~~l~tI~~a--e~~~~~~IfLSaRVHpgeTnsSwvmkGilefl~s~----~p~aq~LRe~~vFKI~PMLNPDGV~~  485 (650)
T KOG3641|consen  412 VGRAMALATIDMA--ECAPRPVIFLSARVHPGETNSSWVMKGILEFLVSN----SPLAQGLRESYVFKIVPMLNPDGVIV  485 (650)
T ss_pred             cCCccceEEeeHh--hcCCcceEEEecccCCCCCcHHHHHHHHHHHhhcC----CcHHHhhhhheeEecccccCCCceec
Confidence            6899888888622  34478999999999999999998888999998864    56667799999999999999999763


Q ss_pred             eecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         376 AVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       376 ~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      .-   .     |=.-.|.||||-|.-.  .+...|.--.-+.|...+
T Consensus       486 Gn---y-----RCSL~G~DLNR~w~tp--s~~shPsi~~~k~li~~l  522 (650)
T KOG3641|consen  486 GN---Y-----RCSLMGLDLNRMWSTP--SPASHPSIYAVKQLIQQL  522 (650)
T ss_pred             cc---c-----eeccccchhhhhcCCC--CcccchhHHhHHHHHhhh
Confidence            31   1     3344799999988322  112456555555555555

>PRK05324 succinylglutamate desuccinylase; Provisional

Probab=97.05  E-value=0.00091  Score=71.09  Aligned_cols=70  Identities=20%  Similarity=0.108  Sum_probs=51.2

Q ss_pred             CCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCcee
Q psy8322         313 LGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFL  392 (651)
Q Consensus       313 ~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~g  392 (651)
                      ...|.|++.||+||+|..|.+++..+++.|....          +.-....++|+.||.++....         |..  .
T Consensus        45 ~~gp~v~IsaGvHGNE~~Gi~~l~~Ll~~l~~~~----------~~~~~~v~~i~~Np~A~~~~~---------R~v--d  103 (329)
T PRK05324         45 PSTKALVLSAGIHGNETAPIELLDQLVRDLLAGE----------LPLRARLLVILGNPPAMRAGK---------RYL--D  103 (329)
T ss_pred             CCCCeEEEECCcccCcHHHHHHHHHHHHhhhccc----------cccCceEEEEecCHHHHHhCc---------ccC--C
Confidence            3569999999999999999999999999886432          111222556689999987533         322  2


Q ss_pred             EeeccCCCCCC
Q psy8322         393 ISLFLPFPVTK  403 (651)
Q Consensus       393 vdlnrnf~~~~  403 (651)
                      .||||-||-..
T Consensus       104 ~DLNR~FpG~~  114 (329)
T PRK05324        104 EDLNRLFGGRH  114 (329)
T ss_pred             CCcccCCCCCc
Confidence            59999998543

>cd06256 M14_ASTE_ASPA_like_6 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=97.01  E-value=0.00092  Score=70.86  Aligned_cols=82  Identities=22%  Similarity=0.204  Sum_probs=56.0

Q ss_pred             CeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEee
Q psy8322         316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISL  395 (651)
Q Consensus       316 p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdl  395 (651)
                      |.|++.|++||+|..|..++..+++++-.       .  . +...  .++++.||-+++...         |....+.||
T Consensus        35 p~v~I~aGvHGNE~~Gi~al~~ll~~~~~-------~--~-~~~~--~~l~i~Np~A~~~~~---------R~~~d~~DL   93 (327)
T cd06256          35 PPLFVSTLLHGNEPTGLQAVQRLLKALEA-------R--P-LPRS--LLLFIGNVAAALAGV---------RRLDGQPDY   93 (327)
T ss_pred             CeEEEEccccCCcHHHHHHHHHHHHhCCh-------h--h-cCCc--EEEEEeCHHHHHhCc---------ccCCCCCCc
Confidence            89999999999999999998888876532       1  1 2333  445579999987533         333346799


Q ss_pred             ccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         396 FLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       396 nrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      ||-||-...    +++...-..+...+
T Consensus        94 NR~Fpg~~~----s~e~r~A~~l~~~l  116 (327)
T cd06256          94 NRCWPGPYD----DPEGRLAEEVLELL  116 (327)
T ss_pred             cCCCCCCCC----CHHHHHHHHHHHHH
Confidence            999985432    45554444554443

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function

Probab=96.93  E-value=0.0024  Score=60.72  Aligned_cols=82  Identities=21%  Similarity=0.333  Sum_probs=59.6

Q ss_pred             CeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCC
Q psy8322          79 PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDL  158 (651)
Q Consensus        79 ~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDL  158 (651)
                      |.=+++||+||+||--+.-++   +.|..          ..+.+-.+.|+| +..+|--++.                 |
T Consensus         7 p~rLFvgGlHG~Egk~t~~iL---~~l~~----------~~~~~G~l~i~p-lv~~~kYiST-----------------L   55 (193)
T PF09892_consen    7 PKRLFVGGLHGDEGKDTSPIL---KRLKP----------NDFNNGNLIIIP-LVENSKYIST-----------------L   55 (193)
T ss_pred             ceEEEEeeccCcchhhHHHHH---HHhCc----------ccccCceEEEEe-CCCCCCceee-----------------c
Confidence            888999999999996655443   33332          223447899999 4445665554                 5


Q ss_pred             CCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCce
Q psy8322         159 NRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNV  210 (651)
Q Consensus       159 NRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~  210 (651)
                      +..|                   ...++-+.|.+++++++|.+++-+|+|+.
T Consensus        56 ~~~Y-------------------Y~s~~Gk~il~lIe~y~P~~Y~ElHsY~~   88 (193)
T PF09892_consen   56 DPEY-------------------YKSEMGKKILDLIEKYKPEFYFELHSYSK   88 (193)
T ss_pred             CHHH-------------------hcchhhhHHHHHHHHhCCceEEEEeecCH
Confidence            5555                   24457789999999999999999999943

>cd06910 M14_ASTE_ASPA_like_7 A functionally uncharacterized subgroup of the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily which is part of the M14 family of metallocarboxypeptidases

Probab=96.82  E-value=0.0006  Score=70.65  Aligned_cols=70  Identities=20%  Similarity=0.083  Sum_probs=46.4

Q ss_pred             CeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEee
Q psy8322         316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISL  395 (651)
Q Consensus       316 p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdl  395 (651)
                      |++++.|++||+|..|.+++..+++.        ++   ..|.. ++.++ ++||-++......+.  ...|.  .+.||
T Consensus         1 P~v~isagvHGnE~~Gi~al~~l~~~--------~~---~~l~G-~li~~-~~N~~A~~~~~~~~p--~~~R~--~~~dL   63 (272)
T cd06910           1 PHVMINALVHGNEICGAIALDALLRE--------GL---RPRRG-RLTLA-FANVAAYARFDPNNP--TASRF--VDEDM   63 (272)
T ss_pred             CEEEEEcCcccChHHHHHHHHHHHhC--------cc---cccCC-CEEEE-EECHHHHHhcccCCC--ccccc--CCCCc
Confidence            78999999999999999999988862        11   11333 45555 799999864331000  01111  24699


Q ss_pred             ccCCCCC
Q psy8322         396 FLPFPVT  402 (651)
Q Consensus       396 nrnf~~~  402 (651)
                      ||-||-+
T Consensus        64 NR~Fpg~   70 (272)
T cd06910          64 NRVWSPD   70 (272)
T ss_pred             CCCCCCc
Confidence            9999854

ASTE catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway, and aspartoacylase (ASPA, also known as aminoacylase 2, and ACY-2; EC:3.5.1.15) cleaves N-acetyl L-aspartic acid (NAA) into aspartate and acetate. NAA is abundant in the brain, and hydrolysis of NAA by ASPA may help maintain white matter. ASPA is an NAA scavenger in other tissues. Mutations in the gene encoding ASPA cause Canavan disease (CD), a fatal progressive neurodegenerative disorder involving dysmyelination and spongiform degeneration of white matter in children. This enzyme binds zinc which is necessary for activity. Measurement of elevated NAA levels in urine is used in the diagnosis of CD.

>cd03855 M14_ASTE Peptidase M14 Succinylglutamate desuccinylase (ASTE, also known as N-succinyl-L-glutamate amidohydrolase, N2-succinylglutamate desuccinylase, and SGDS; EC 3

Probab=96.82  E-value=0.0021  Score=68.20  Aligned_cols=69  Identities=22%  Similarity=0.156  Sum_probs=51.0

Q ss_pred             CCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCcee
Q psy8322         313 LGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFL  392 (651)
Q Consensus       313 ~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~g  392 (651)
                      ...|.|++.|++||+|..|.+++..+++.|....          +.-....++|+.||.++....         |..  .
T Consensus        40 ~~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~~----------l~~~~~v~~~~~Np~A~~~~~---------R~~--d   98 (322)
T cd03855          40 PATKAIVISAGVHGNETAPIEILNQLIKDLLAGE----------LPLAHRLLFIFGNPPAMRAGE---------RFV--D   98 (322)
T ss_pred             CCCCeEEEEccccCCchhHHHHHHHHHHhhhhcc----------ccCCeEEEEEeeCHHHHHhCc---------ccC--C
Confidence            3568999999999999999999999999886432          112233567789999887533         221  2


Q ss_pred             EeeccCCCCC
Q psy8322         393 ISLFLPFPVT  402 (651)
Q Consensus       393 vdlnrnf~~~  402 (651)
                      .||||-||-.
T Consensus        99 ~DLNR~FpG~  108 (322)
T cd03855          99 ENLNRLFSGR  108 (322)
T ss_pred             CCccCCCCCC
Confidence            4999999844

5.1.96) belongs to the Succinylglutamate desuccinylase (ASTE)/aspartoacylase (ASPA) subfamily of the M14 family of metallocarboxypeptidases. This group includes succinylglutamate desuccinylase that catalyzes the fifth and last step in arginine catabolism by the arginine succinyltransferase pathway. It hydrolyzes N-succinyl-L-glutamate to succinate and L-glutamate.

>cd00421 intradiol_dioxygenase Intradiol dioxygenases catalyze the critical ring-cleavage step in the conversion of catecholate derivatives to citric acid cycle intermediates

Probab=96.73  E-value=0.0046  Score=57.83  Aligned_cols=46  Identities=24%  Similarity=0.504  Sum_probs=39.1

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeeee--------------------eeeeCCCeeE-EeeccCceEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKNV--------------------SFMSSQRGEY-WRVLMPGIYF  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~~--------------------~~~Td~~G~f-~~~l~~g~y~  554 (651)
                      .|+|+|+|.+|.|+++|.|.|-....                    ...||++|.| +..+.||.|.
T Consensus        13 ~l~G~V~D~~g~pv~~A~VeiW~~d~~G~Y~~~~~~~~~~~~~~rg~~~Td~~G~y~f~ti~Pg~Y~   79 (146)
T cd00421          13 TLTGTVLDGDGCPVPDALVEIWQADADGRYSGQDDSGLDPEFFLRGRQITDADGRYRFRTIKPGPYP   79 (146)
T ss_pred             EEEEEEECCCCCCCCCcEEEEEecCCCCccCCcCccccCCCCCCEEEEEECCCcCEEEEEEcCCCCC
Confidence            48999999999999999999864221                    4679999999 7789999998

This family contains catechol 1,2-dioxygenases and protocatechuate 3,4-dioxygenases which are mononuclear non-heme iron enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings. The members are intradiol-cleaving enzymes which break the catechol C1-C2 bond and utilize Fe3+, as opposed to the extradiol-cleaving enzymes which break the C2-C3 or C1-C6 bond and utilize Fe2+ and Mn+. Catechol 1,2-dioxygenases are mostly homodimers with one catalytic ferric ion per monomer. Protocatechuate 3,4-dioxygenases form more diverse oligomers.

>TIGR03242 arg_catab_astE succinylglutamate desuccinylase

Probab=96.72  E-value=0.0013  Score=69.61  Aligned_cols=68  Identities=24%  Similarity=0.171  Sum_probs=49.5

Q ss_pred             CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeE
Q psy8322         314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLI  393 (651)
Q Consensus       314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gv  393 (651)
                      ..|.|++.||+||+|..|.+++..+++.+...-         +--+.++.++ ++||.++....         |..  ..
T Consensus        40 ~gp~v~IsaGvHGNE~~Gi~~l~~ll~~l~~~~---------~~~~~~l~~i-~~Np~A~~~~~---------R~~--~~   98 (319)
T TIGR03242        40 PQKSLVISAGIHGNETAPIEILEQLLGDIAAGK---------LPLRVRLLVI-LGNPPAMRTGK---------RYL--HD   98 (319)
T ss_pred             CCCEEEEEcCcccchHHHHHHHHHHHhhhhhcc---------ccCCceEEEE-EcCHHHHHhCc---------ccC--CC
Confidence            458999999999999999999999998875321         1123445444 79999987433         322  25


Q ss_pred             eeccCCCCC
Q psy8322         394 SLFLPFPVT  402 (651)
Q Consensus       394 dlnrnf~~~  402 (651)
                      ||||-||-.
T Consensus        99 DLNR~FpG~  107 (319)
T TIGR03242        99 DLNRMFGGR  107 (319)
T ss_pred             CccCCCCCc
Confidence            999999843

Members of this protein family are succinylglutamate desuccinylase, the fifth and final enzyme of the arginine succinyltransferase (AST) pathway for arginine catabolism. This model excludes the related protein aspartoacylase.

>PF07210 DUF1416: Protein of unknown function (DUF1416); InterPro: IPR010814 This family consists of several hypothetical bacterial proteins of around 100 residues in length

Probab=96.63  E-value=0.015  Score=47.78  Aligned_cols=54  Identities=19%  Similarity=0.320  Sum_probs=45.1

Q ss_pred             cceeEEEEcCCCCcccceEEEEeeee----eeeeeCCCeeEEeeccCceEEEEEEEeee
Q psy8322         508 RGVKGLVLDETGSRLANVSISLAYKN----VSFMSSQRGEYWRVLMPGIYFIEASKEGY  562 (651)
Q Consensus       508 ~~i~G~V~D~~g~pi~~A~V~i~~~~----~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy  562 (651)
                      ..|+|+|+ .+|+|+++|.|.+.+..    ..+.|+..|.|..-..||+++|++...+=
T Consensus         8 ~VItG~V~-~~G~Pv~gAyVRLLD~sgEFtaEvvts~~G~FRFfaapG~WtvRal~~~g   65 (85)
T PF07210_consen    8 TVITGRVT-RDGEPVGGAYVRLLDSSGEFTAEVVTSATGDFRFFAAPGSWTVRALSRGG   65 (85)
T ss_pred             EEEEEEEe-cCCcCCCCeEEEEEcCCCCeEEEEEecCCccEEEEeCCCceEEEEEccCC
Confidence            35999999 99999999999998743    35689999999666789999999866554

Members of this family appear to be Actinomycete specific. The function of this family is unknown.

>PF10994 DUF2817: Protein of unknown function (DUF2817); InterPro: IPR021259 This family of proteins has no known function

Probab=96.25  E-value=0.022  Score=60.63  Aligned_cols=83  Identities=23%  Similarity=0.187  Sum_probs=63.2

Q ss_pred             CCcceEEEEeeCCCccCCCCCeEEEeccccCCCc-chHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCce
Q psy8322         296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEP-IGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE  374 (651)
Q Consensus       296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~-~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~  374 (651)
                      |.-.+-++.++...    .+..+++.+|.||=|= .|+.+-+.+++.+.         -..+.+++.+.+|=.+||=|+.
T Consensus        36 e~L~~Dva~lg~~~----a~~lLv~~SGtHGVEGf~GSaiQ~~~L~~~~---------~~~~~~~~avllVHAlNPyGfa  102 (341)
T PF10994_consen   36 EDLATDVAWLGPKD----ASRLLVLTSGTHGVEGFAGSAIQIALLREDL---------ARSLPAGVAVLLVHALNPYGFA  102 (341)
T ss_pred             CcceeEEEEecCCC----CCeEEEEEecCCcccccccHHHHHHHHHccc---------ccccCCCCeEEEEEccCccccc
Confidence            33345566665432    4568888999999984 56666667776542         1356789999999999999999


Q ss_pred             eeecccccCCCCCCCceeEeeccCCC
Q psy8322         375 LAVEGNCRSGRGRTPPFLISLFLPFP  400 (651)
Q Consensus       375 ~~~~~~~~~~kgr~~~~gvdlnrnf~  400 (651)
                      ...         |.|-.+|||||||-
T Consensus       103 ~~R---------R~nE~NVDLNRNfl  119 (341)
T PF10994_consen  103 WLR---------RVNENNVDLNRNFL  119 (341)
T ss_pred             eee---------ccCCcCcCcccccC
Confidence            888         89999999999993

>PF02369 Big_1: Bacterial Ig-like domain (group 1); InterPro: IPR003344 Proteins that contain this domain are found in a variety of bacterial and phage surface proteins such as intimins

Probab=95.63  E-value=0.064  Score=46.70  Aligned_cols=62  Identities=15%  Similarity=0.227  Sum_probs=43.8

Q ss_pred             ceeEEEEcCCCCcccceEEEE--eee--ee-----eeeeCCCeeE---EeeccCceEEEEEEEeeeeeEEEEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISL--AYK--NV-----SFMSSQRGEY---WRVLMPGIYFIEASKEGYELFRDRIK  570 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i--~~~--~~-----~~~Td~~G~f---~~~l~~g~y~l~vs~~Gy~~~~~~v~  570 (651)
                      .++-+|+|..|.||++..|.+  ...  ..     ...||++|.+   +..-.+|.|+|+++..|-......+.
T Consensus        26 tltatV~D~~gnpv~g~~V~f~~~~~~~~l~~~~~~~~Td~~G~a~~tltst~aG~~~VtA~~~~~~~~~~~~~   99 (100)
T PF02369_consen   26 TLTATVTDANGNPVPGQPVTFSSSSSGGTLSPTNTSATTDSNGIATVTLTSTKAGTYTVTATVDGGSTSVTSVT   99 (100)
T ss_dssp             EEEEEEEETTSEB-TS-EEEE--EESSSEES-CEE-EEE-TTSEEEEEEE-SS-EEEEEEEEETTEEEEEEEEE
T ss_pred             EEEEEEEcCCCCCCCCCEEEEEEcCCCcEEecCccccEECCCEEEEEEEEecCceEEEEEEEECCcceeEEeee
Confidence            488999999999999999999  221  11     2679999998   33467899999999998876655543

Intimin is a bacterial cell-adhesion molecule that mediates the intimate bacterial host-cell interaction. It contains three domains; two immunoglobulin-like domains and a C-type lectin-like module implying that carbohydrate recognition may be important in intimin-mediated cell adhesion [].; PDB: 1CWV_A 4E9L_A 1F02_I 1F00_I.

>KOG1948|consensus

Probab=95.59  E-value=0.03  Score=64.06  Aligned_cols=68  Identities=25%  Similarity=0.263  Sum_probs=55.9

Q ss_pred             cceeEEEEc-CCCCcccceEEEEeeeeeeeeeCCCeeE-Eee-ccCceEEEEEEEeeeeeEEEEEEeeCCCc
Q psy8322         508 RGVKGLVLD-ETGSRLANVSISLAYKNVSFMSSQRGEY-WRV-LMPGIYFIEASKEGYELFRDRIKIPESTS  576 (651)
Q Consensus       508 ~~i~G~V~D-~~g~pi~~A~V~i~~~~~~~~Td~~G~f-~~~-l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~  576 (651)
                      ..++|+|.+ ..|.|+++|.|.+.+ +.+..||.+|.| +.+ +..|+|+|++.+.-++=.+..+.+..+..
T Consensus       316 fSvtGRVl~g~~g~~l~gvvvlvng-k~~~kTdaqGyykLen~~t~gtytI~a~kehlqFstv~~kv~pnta  386 (1165)
T KOG1948|consen  316 FSVTGRVLVGSKGLPLSGVVVLVNG-KSGGKTDAQGYYKLENLKTDGTYTITAKKEHLQFSTVHAKVKPNTA  386 (1165)
T ss_pred             EEeeeeEEeCCCCCCccceEEEEcC-cccceEcccceEEeeeeeccCcEEEEEeccceeeeeEEEEecCCcc
Confidence            359999999 689999999999855 678899999999 556 88999999998888877666666654443

>PF00775 Dioxygenase_C: Dioxygenase; InterPro: IPR000627 This entry represents the C-terminal domain common to several intradiol ring-cleavage dioxygenases

Probab=95.58  E-value=0.049  Score=52.88  Aligned_cols=46  Identities=24%  Similarity=0.470  Sum_probs=32.6

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee--------------------eeeeeeCCCeeE-EeeccCceEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK--------------------NVSFMSSQRGEY-WRVLMPGIYF  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~--------------------~~~~~Td~~G~f-~~~l~~g~y~  554 (651)
                      .|+|+|+|.+|+||++|.|.|=-.                    .-...||++|.| +..+.||.|.
T Consensus        31 ~l~G~V~D~~g~Pv~~A~veiWqada~G~Ys~~~~~~~~~~~~~rG~~~Td~~G~y~f~Ti~Pg~Y~   97 (183)
T PF00775_consen   31 VLHGRVIDTDGKPVPGALVEIWQADADGRYSGQDPGSDQPDFNLRGRFRTDADGRYSFRTIKPGPYP   97 (183)
T ss_dssp             EEEEEEEETTSSB-TTEEEEEEE--TTS--TTTBTTSSSSTTTTEEEEEECTTSEEEEEEE----EE
T ss_pred             EEEEEEECCCCCCCCCcEEEEEecCCCCccccccccccccCCCcceEEecCCCCEEEEEeeCCCCCC
Confidence            489999999999999999998311                    014579999999 7778888876

Dioxygenases catalyse the incorporation of both atoms of molecular oxygen into substrates using a variety of reaction mechanisms. Cleavage of aromatic rings is one of the most important functions of dioxygenases, which play key roles in the degradation of aromatic compounds. The substrates of ring-cleavage dioxygenases can be classified into two groups according to the mode of scission of the aromatic ring. Intradiol enzymes use a non-haem Fe(III) to cleave the aromatic ring between two hydroxyl groups (ortho-cleavage), whereas extradiol enzymes (IPR000486 from INTERPRO) use a non-haem Fe(II) to cleave the aromatic ring between a hydroxylated carbon and an adjacent non-hydroxylated carbon (meta-cleavage) []. These two subfamilies differ in sequence, structural fold, iron ligands, and the orientation of second sphere active site amino acid residues. Enzymes that belong to the intradiol family include catechol 1,2-dioxygenase (1,2-CTD) (1.13.11.1 from EC); protocatechuate 3,4-dioxygenase (3,4-PCD) (1.13.11.3 from EC); and chlorocatechol 1,2-dioxygenase (1.13.11.1 from EC) [].; GO: 0003824 catalytic activity, 0008199 ferric iron binding, 0006725 cellular aromatic compound metabolic process, 0055114 oxidation-reduction process; PDB: 2BUV_A 2BUX_A 2BUU_A 2BUR_A 1EO9_A 2BUZ_A 2BV0_A 1EO2_A 1EOC_A 1EOA_A ....

>cd03458 Catechol_intradiol_dioxygenases Catechol intradiol dioxygenases can be divided into several subgroups according to their substrate specificity for catechol, chlorocatechols and hydroxyquinols

Probab=95.53  E-value=0.041  Score=55.94  Aligned_cols=64  Identities=27%  Similarity=0.444  Sum_probs=48.3

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceE----------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIY----------------  553 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y----------------  553 (651)
                      .++|+|+|.+|+||++|.|.|=-.+                  -...||++|.| +..+.||.|                
T Consensus       106 ~l~G~V~D~~G~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~lRG~~~Td~~G~y~f~Ti~P~~Ypip~dGp~g~lL~~~g  185 (256)
T cd03458         106 FVHGTVTDTDGKPLAGATVDVWHADPDGFYSQQDPDQPEFNLRGKFRTDEDGRYRFRTIRPVPYPIPPDGPTGELLEALG  185 (256)
T ss_pred             EEEEEEEcCCCCCCCCcEEEEEccCCCCCcCCCCCCCCCCCCEEEEEeCCCCCEEEEEECCCCccCCCCCcHHHHHHhcc
Confidence            4899999999999999999984211                  14679999999 777888766                


Q ss_pred             ---------EEEEEEeeeeeEEEEEEee
Q psy8322         554 ---------FIEASKEGYELFRDRIKIP  572 (651)
Q Consensus       554 ---------~l~vs~~Gy~~~~~~v~v~  572 (651)
                               .+.|++.||.+.+-++-..
T Consensus       186 rh~~RpaHIHf~V~a~G~~~LtTqlyf~  213 (256)
T cd03458         186 RHPWRPAHIHFMVSAPGYRTLTTQIYFE  213 (256)
T ss_pred             cCCCCCCeEEEEEECCCcceeeEEEecC
Confidence                     5567888886655555443

Almost all members of this family are homodimers containing one ferric ion (Fe3+) per monomer. They belong to the intradiol dioxygenase family, a family of mononuclear non-heme iron intradiol-cleaving enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings.

>PF14686 fn3_3: Polysaccharide lyase family 4, domain II; PDB: 1NKG_A 2XHN_B 3NJX_A 3NJV_A

Probab=95.26  E-value=0.1  Score=45.02  Aligned_cols=64  Identities=27%  Similarity=0.403  Sum_probs=33.4

Q ss_pred             ceeEEEEcCCC---Ccc-cceEEEEe-------ee--eeeeeeCCCeeE-EeeccCceEEEEEEEee----eeeEEEEEE
Q psy8322         509 GVKGLVLDETG---SRL-ANVSISLA-------YK--NVSFMSSQRGEY-WRVLMPGIYFIEASKEG----YELFRDRIK  570 (651)
Q Consensus       509 ~i~G~V~D~~g---~pi-~~A~V~i~-------~~--~~~~~Td~~G~f-~~~l~~g~y~l~vs~~G----y~~~~~~v~  570 (651)
                      .|+|+|.-.+|   .|. ..+.|-+.       +.  ..-+.+|.+|.| +.++.||+|+|.+=..|    |...+..|+
T Consensus         4 ~VsG~l~l~dg~~~~~~~~~~~Vgl~~~~d~~q~~~yqYwt~td~~G~Fti~~V~pGtY~L~ay~~g~~g~~~~~~~~It   83 (95)
T PF14686_consen    4 SVSGRLTLSDGVTNPPAGANAVVGLAPPGDFQQNKGYQYWTRTDSDGNFTIPNVRPGTYRLYAYADGIFGDYKVASDSIT   83 (95)
T ss_dssp             EEEEEEE---SS--TT--S-EEEEEE--------SS-EEEEE--TTSEEE---B-SEEEEEEEEE----TTEEEEEEEEE
T ss_pred             EEEEEEEEccCcccCccceeEEEEeeeccccccCCCCcEEEEeCCCCcEEeCCeeCcEeEEEEEEecccCceEEecceEE
Confidence            48999885544   343 33455554       21  235779999999 77899999999997744    433345555


Q ss_pred             ee
Q psy8322         571 IP  572 (651)
Q Consensus       571 v~  572 (651)
                      |.
T Consensus        84 V~   85 (95)
T PF14686_consen   84 VS   85 (95)
T ss_dssp             E-
T ss_pred             Ec
Confidence            55

>PF05738 Cna_B: Cna protein B-type domain; InterPro: IPR008454 This entry represents a repeated B region domain found in the collagen-binding surface protein Cna in Staphylococcus aureus, as well as other related domains

Probab=95.23  E-value=0.082  Score=42.45  Aligned_cols=47  Identities=28%  Similarity=0.613  Sum_probs=35.7

Q ss_pred             ccceEEEEeeee----e--eeeeCCCeeE-EeeccCceEEEEEEE--eeeeeEEEE
Q psy8322         522 LANVSISLAYKN----V--SFMSSQRGEY-WRVLMPGIYFIEASK--EGYELFRDR  568 (651)
Q Consensus       522 i~~A~V~i~~~~----~--~~~Td~~G~f-~~~l~~g~y~l~vs~--~Gy~~~~~~  568 (651)
                      |+||++.|....    .  ..+||++|.| +..|++|.|.|+...  .||......
T Consensus         1 L~Ga~f~L~~~~~~~~~~~~~~Td~~G~~~f~~L~~G~Y~l~E~~aP~GY~~~~~~   56 (70)
T PF05738_consen    1 LAGATFELYDEDGNEVIEVTVTTDENGKYTFKNLPPGTYTLKETKAPDGYQLDDTP   56 (70)
T ss_dssp             -STEEEEEEETTSEEEEEEEEEGGTTSEEEEEEEESEEEEEEEEETTTTEEEEECE
T ss_pred             CCCeEEEEEECCCCEEEEEEEEECCCCEEEEeecCCeEEEEEEEECCCCCEECCCc
Confidence            567888876532    1  2679999999 778999999999877  899875543

The B region domain of Cna has a prealbumin-like beta-sandwich fold of seven strands in two sheets with a Greek key topology []. However, this domain does not mediate collagen binding, the IPR008456 from INTERPRO region carries out that function; instead it appears to form a stalk that presents the ligand binding domain away from the bacterial cell surface. Cna is a collagen-binding MSCRAMM (Microbial Surface Component Recognizing Adhesive Matrix Molecules), and is necessary and sufficient for S. aureus cells to adhere to cartilage.; PDB: 2X5P_A 3RKP_A 3KPT_A 1VLF_T 1TI2_F 1TI6_D 1TI4_J 1VLE_V 1VLD_X 3PF2_A ....

>COG4073 Uncharacterized protein conserved in archaea [Function unknown]

Probab=95.21  E-value=0.036  Score=51.47  Aligned_cols=76  Identities=21%  Similarity=0.287  Sum_probs=57.3

Q ss_pred             EEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCC
Q psy8322          82 KIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQ  161 (651)
Q Consensus        82 ~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRn  161 (651)
                      +++||.||+||-.++-++. ++.|-.             .+-++.|+|.+|+-=|.-+.                  |-.
T Consensus        18 lfV~GlHGdEgk~te~ilr-l~~~~~-------------~ng~l~Vip~v~n~~YISTl------------------dp~   65 (198)
T COG4073          18 LFVGGLHGDEGKATEPILR-LRVLPE-------------ENGVLRVIPKVENGPYISTL------------------DPS   65 (198)
T ss_pred             EEEeeccCcccchhhhhhh-hcccCc-------------cCceEEEEeccCCCCceeec------------------Chh
Confidence            8899999999998888776 332221             24589999999887776332                  222


Q ss_pred             CCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecC
Q psy8322         162 FPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGG  208 (651)
Q Consensus       162 f~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~  208 (651)
                      |                   ...++-+.+.+.+++++|.+++.+|+|
T Consensus        66 y-------------------y~s~~G~~ilr~vek~rP~vY~ElH~Y   93 (198)
T COG4073          66 Y-------------------YRSEVGARILRVVEKLRPDVYVELHCY   93 (198)
T ss_pred             h-------------------ccchhhHHHHHHHHHhCCceEEEEeec
Confidence            2                   234677889999999999999999999

>TIGR02465 chlorocat_1_2 chlorocatechol 1,2-dioxygenase

Probab=95.11  E-value=0.062  Score=54.38  Aligned_cols=64  Identities=22%  Similarity=0.371  Sum_probs=47.8

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceE----------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIY----------------  553 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y----------------  553 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                  -...||++|.| +..+.||.|                
T Consensus       100 ~v~G~V~D~~G~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~lRG~~~Td~~G~y~F~Ti~P~~YpiP~dgp~g~lL~~~g  179 (246)
T TIGR02465       100 LIRGTVRDLSGTPVAGAVIDVWHSTPDGKYSGFHDNIPDDYYRGKLVTAADGSYEVRTTMPVPYQIPDAGPTGALLETMG  179 (246)
T ss_pred             EEEEEEEcCCCCCcCCcEEEEECCCCCCCCCCCCCCCCCCCCeEEEEECCCCCEEEEEECCCCCCCCCCCchHHHHHhcc
Confidence            4899999999999999999984210                  14578999999 777777766                


Q ss_pred             ---------EEEEEEeeeeeEEEEEEee
Q psy8322         554 ---------FIEASKEGYELFRDRIKIP  572 (651)
Q Consensus       554 ---------~l~vs~~Gy~~~~~~v~v~  572 (651)
                               .+.|++.||.+.+.++-..
T Consensus       180 rh~~RpaHIH~~V~a~G~~~L~Tqiyf~  207 (246)
T TIGR02465       180 RHSWRPAHVHYKVRADGYRPLTTQAYFE  207 (246)
T ss_pred             cCCCCCCeEEEEEECCCcCceEEeEecC
Confidence                     4567888887665555443

Members of this protein family are chlorocatechol 1,2-dioxygenase. This protein is closely related to catechol 1,2-dioxygenase, TIGR02439, EC 1.13.11.1. Note that annotated database entries have appeared for the present protein family with the EC number that refers to that of family TIGR02439. This protein acts in pathways of the biodegradation of chlorinated aromatic compounds.

>cd03462 1,2-CCD chlorocatechol 1,2-dioxygenases (1,2-CCDs) (type II enzymes) are homodimeric intradiol dioxygenases that degrade chlorocatechols via the addition of molecular oxygen and the subsequent cleavage between two adjacent hydroxyl groups

Probab=95.07  E-value=0.069  Score=54.03  Aligned_cols=64  Identities=22%  Similarity=0.370  Sum_probs=48.0

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceE----------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIY----------------  553 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y----------------  553 (651)
                      .++|+|+|.+|+||++|.|.|=-.+                  -...||++|.| +..+.||.|                
T Consensus       101 ~l~G~V~D~~G~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~Td~~G~y~F~Ti~P~~YpiP~dGp~g~lL~~~g  180 (247)
T cd03462         101 LFRGTVKDLAGAPVAGAVIDVWHSTPDGKYSGFHPNIPEDYYRGKIRTDEDGRYEVRTTVPVPYQIPNDGPTGALLEAMG  180 (247)
T ss_pred             EEEEEEEcCCCCCcCCcEEEEECCCCCCCcCCCCCCCCCCCCEEEEEeCCCCCEEEEEECCCCcCCCCCCcHHHHHHhcc
Confidence            4899999999999999999984210                  14578999999 677777665                


Q ss_pred             ---------EEEEEEeeeeeEEEEEEee
Q psy8322         554 ---------FIEASKEGYELFRDRIKIP  572 (651)
Q Consensus       554 ---------~l~vs~~Gy~~~~~~v~v~  572 (651)
                               .+.|++.||.+.+.++-..
T Consensus       181 rh~~RpaHIHf~V~a~G~~~L~Tqlyf~  208 (247)
T cd03462         181 GHSWRPAHVHFKVRADGYETLTTQLYFE  208 (247)
T ss_pred             cCCCCCCeEEEEEECCCcCceEEEEecC
Confidence                     4567888887665555444

This reaction is part of the modified ortho-cleavage pathway which is a central oxidative bacterial pathway that channels chlorocatechols, derived from the degradation of chlorinated benzoic acids, phenoxyacetic acids, phenols, benzenes, and other aromatics into the energy-generating tricarboxylic acid pathway.

>TIGR02439 catechol_proteo catechol 1,2-dioxygenase, proteobacterial

Probab=95.00  E-value=0.072  Score=55.04  Aligned_cols=64  Identities=25%  Similarity=0.387  Sum_probs=48.8

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceE----------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIY----------------  553 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y----------------  553 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                  -...||++|.| +..+.|+.|                
T Consensus       130 ~v~G~V~D~~G~PI~gA~VeIWqad~~G~Ys~~~~~~~~~~lRG~~~TD~~G~y~F~TI~P~~YpiP~dGp~g~lL~~~g  209 (285)
T TIGR02439       130 FLHGQVTDADGKPIAGAKVELWHANTKGNYSHFDKSQSEFNLRRTIITDAEGRYRARSIVPSGYGCPPQGPTQQLLNLLG  209 (285)
T ss_pred             EEEEEEECCCCCCcCCcEEEEEccCCCCCcCCCCCCCCCCCceEEEEECCCCCEEEEEECCCCCcCCCCCcHHHHHHhcc
Confidence            4899999999999999999984210                  14579999999 777777766                


Q ss_pred             ---------EEEEEEeeeeeEEEEEEee
Q psy8322         554 ---------FIEASKEGYELFRDRIKIP  572 (651)
Q Consensus       554 ---------~l~vs~~Gy~~~~~~v~v~  572 (651)
                               .+.|++.||++.+.++-..
T Consensus       210 rh~~RpaHIHf~V~a~G~~~LtTQiyf~  237 (285)
T TIGR02439       210 RHGNRPAHVHFFVSAPGHRKLTTQINIE  237 (285)
T ss_pred             CCCCCCCeEEEEEecCCCCeeEEEEecC
Confidence                     4568888887766666554

Members of this family known so far are catechol 1,2-dioxygenases of the Proteobacteria. They are distinct from catechol 1,2-dioxygenases and chlorocatechol 1,2-dioxygenases of the Actinobacteria, which are quite similar to each other and resolved by separate models. This enzyme catalyzes intradiol cleavage in which catechol + O2 becomes cis,cis-muconate. Catechol is an intermediate in the catabolism of many different aromatic compounds, as is the alternative intermediate protocatechuate. In Acinetobacter lwoffii, two isozymes are present with abilities, differing somewhat, to act on catechol analogs 3-methylcatechol, 4-methylcatechol, 4-methoxycatechol, and 4-chlorocatechol.

>cd03459 3,4-PCD Protocatechuate 3,4-dioxygenase (3,4-PCD) catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate

Probab=94.94  E-value=0.073  Score=50.38  Aligned_cols=63  Identities=24%  Similarity=0.445  Sum_probs=45.7

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee-------------------e----eeeeeCCCeeE-EeeccCceEE----------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK-------------------N----VSFMSSQRGEY-WRVLMPGIYF----------  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~-------------------~----~~~~Td~~G~f-~~~l~~g~y~----------  554 (651)
                      .|+|+|+|.+|+||++|.|.|=-.                   .    -...||.+|.| +..+.||.|.          
T Consensus        17 ~l~g~V~D~~g~Pv~~A~veiWqad~~G~Y~~~~~~~~~~~~~~f~~rG~~~Td~~G~~~f~Ti~Pg~Y~~p~~~~R~~H   96 (158)
T cd03459          17 ILEGRVLDGDGRPVPDALVEIWQADAAGRYRHPRDSHRAPLDPNFTGFGRVLTDADGRYRFRTIKPGAYPWRNGAWRAPH   96 (158)
T ss_pred             EEEEEEECCCCCCCCCCEEEEEccCCCCccCCccCCcccccCCCCCceeEEEECCCCcEEEEEECCCCcCCCCCCCcCCE
Confidence            489999999999999999998310                   0    13579999999 7788999887          


Q ss_pred             --EEEEEeee-eeEEEEEEe
Q psy8322         555 --IEASKEGY-ELFRDRIKI  571 (651)
Q Consensus       555 --l~vs~~Gy-~~~~~~v~v  571 (651)
                        +.|.+.|| ...+-++-.
T Consensus        97 IH~~V~~~g~~~~L~Tqlyf  116 (158)
T cd03459          97 IHVSVFARGLLERLVTRLYF  116 (158)
T ss_pred             EEEEEECCCcccceEEeEec
Confidence              34556666 444444433

3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+.

>cd03460 1,2-CTD Catechol 1,2 dioxygenase (1,2-CTD) catalyzes an intradiol cleavage reaction of catechol to form cis,cis-muconate

Probab=94.89  E-value=0.079  Score=54.63  Aligned_cols=65  Identities=25%  Similarity=0.410  Sum_probs=48.9

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceE----------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIY----------------  553 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y----------------  553 (651)
                      .++|+|+|.+|+||++|.|.|=-.+                  -...||++|.| +..+.||.|                
T Consensus       126 ~l~G~V~D~~G~PI~~A~VeiWqad~~G~Ys~~~~~~~~f~~RGr~~TD~~G~y~F~TI~P~~YpiP~dGp~g~lL~~~g  205 (282)
T cd03460         126 VMHGTVTDTDGKPVPGAKVEVWHANSKGFYSHFDPTQSPFNLRRSIITDADGRYRFRSIMPSGYGVPPGGPTQQLLNALG  205 (282)
T ss_pred             EEEEEEECCCCCCcCCcEEEEECCCCCCCcCCCCCCCCCCCCceEEEeCCCCCEEEEEECCCCCcCCCCCcHHHHHHhhc
Confidence            4899999999999999999984110                  14579999999 777777766                


Q ss_pred             ---------EEEEEEeeeeeEEEEEEeeC
Q psy8322         554 ---------FIEASKEGYELFRDRIKIPE  573 (651)
Q Consensus       554 ---------~l~vs~~Gy~~~~~~v~v~~  573 (651)
                               .+.|++.||++.+.++-...
T Consensus       206 rh~~RpaHIHf~V~a~G~~~LtTqlyf~g  234 (282)
T cd03460         206 RHGNRPAHIHFFVSAPGHRKLTTQINIEG  234 (282)
T ss_pred             CCCCCCCeEEEEEecCCcCceEEEEecCC
Confidence                     45678888876666655443

1,2-CTDs is homodimers with one catalytic non-heme ferric ion per monomer. They belong to the aromatic dioxygenase family, a family of mononuclear non-heme iron intradiol-cleaving enzymes that catalyze the oxygenation of catecholates to aliphatic acids via the cleavage of aromatic rings.

>TIGR02438 catachol_actin catechol 1,2-dioxygenase, Actinobacterial

Probab=94.65  E-value=0.094  Score=54.02  Aligned_cols=65  Identities=22%  Similarity=0.332  Sum_probs=48.4

Q ss_pred             ceeEEEEcCCCCcccceEEEEe--e---e-------------eeeeeeCCCeeE-EeeccCceEE---------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLA--Y---K-------------NVSFMSSQRGEY-WRVLMPGIYF---------------  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~--~---~-------------~~~~~Td~~G~f-~~~l~~g~y~---------------  554 (651)
                      .|+|+|+|.+|+||++|.|.|=  +   .             .-...||++|.| +..+.||.|.               
T Consensus       134 ~v~G~V~D~~G~Pv~gA~VdiWqada~G~Ys~~~~~~~~~~lRGr~~TDadG~y~F~TI~Pg~YpiP~dGp~G~lL~~~G  213 (281)
T TIGR02438       134 VFSGQVTDLDGNGLAGAKVELWHADDDGFYSQFAPGIPEWNLRGTIIADDEGRFEITTMQPAPYQIPTDGPTGKFIAAAG  213 (281)
T ss_pred             EEEEEEEcCCCCCcCCCEEEEEecCCCCCcCCCCCCCCCCCCeEEEEeCCCCCEEEEEECCCCcCCCCCCchHHHHHhcc
Confidence            4899999999999999999992  1   1             114578999999 6677776654               


Q ss_pred             ----------EEEEEeeeeeEEEEEEeeC
Q psy8322         555 ----------IEASKEGYELFRDRIKIPE  573 (651)
Q Consensus       555 ----------l~vs~~Gy~~~~~~v~v~~  573 (651)
                                +.|++.||++.+-++-...
T Consensus       214 rh~~RpaHIHf~V~a~G~~~LtTqiyf~g  242 (281)
T TIGR02438       214 GHPWRPAHLHLKVSAPGHELITTQLYFKG  242 (281)
T ss_pred             cCCCCCCEEEEEEECCCcceEEEeEecCC
Confidence                      5578888877666655543

Members of this family are catechol 1,2-dioxygenases of the Actinobacteria. They are more closely related to actinobacterial chlorocatechol 1,2-dioxygenases than to proteobacterial catechol 1,2-dioxygenases, and so are built in this separate model. The member from Rhodococcus rhodochrous NCIMB 13259 (GB|AAC33003.1) is described as a homodimer with bound Fe, similarly active on catechol, 3-methylcatechol and 4-methylcatechol.

>cd03463 3,4-PCD_alpha Protocatechuate 3,4-dioxygenase (3,4-PCD) , alpha subunit

Probab=94.61  E-value=0.084  Score=51.26  Aligned_cols=46  Identities=15%  Similarity=0.357  Sum_probs=36.7

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee------------------ee----eeeeCCCeeE-EeeccCceEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK------------------NV----SFMSSQRGEY-WRVLMPGIYF  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~------------------~~----~~~Td~~G~f-~~~l~~g~y~  554 (651)
                      .|+|+|+|.+|+||++|.|.|=-.                  ..    ...||++|.| +..+.||.|.
T Consensus        38 ~l~G~V~D~~g~Pi~gA~VeiWqad~~G~Y~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~Ti~Pg~Y~  106 (185)
T cd03463          38 TLEGRVYDGDGAPVPDAMLEIWQADAAGRYAHPADSRRRLDPGFRGFGRVATDADGRFSFTTVKPGAVP  106 (185)
T ss_pred             EEEEEEECCCCCCCCCCEEEEEcCCCCCccCCcCCcccccCCCCCcEEEEEECCCCCEEEEEEcCCCcC
Confidence            489999999999999999998421                  00    3579999999 7778888875

3,4-PCD catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate. 3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-subunit-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+.

>cd03461 1,2-HQD Hydroxyquinol 1,2-dioxygenase (1,2-HQD) catalyzes the ring cleavage of hydroxyquinol (1,2,4-trihydroxybenzene), a intermediate in the degradation of a large variety of aromatic compounds including some polychloro- and nitroaromatic pollutants, to form 3-hydroxy-cis,cis-muconates

Probab=94.47  E-value=0.09  Score=54.14  Aligned_cols=64  Identities=25%  Similarity=0.380  Sum_probs=48.2

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee------------------eeeeeeCCCeeE-EeeccCceEE---------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK------------------NVSFMSSQRGEY-WRVLMPGIYF---------------  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~------------------~~~~~Td~~G~f-~~~l~~g~y~---------------  554 (651)
                      .++|+|+|..|+||++|.|.|=-.                  .-...||++|.| +..+.||.|.               
T Consensus       122 ~v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~lRGr~~Td~~G~y~F~Ti~Pg~Ypip~dGp~g~lL~~~g  201 (277)
T cd03461         122 FVHGRVTDTDGKPLPGATVDVWQADPNGLYDVQDPDQPEFNLRGKFRTDEDGRYAFRTLRPTPYPIPTDGPVGKLLKAMG  201 (277)
T ss_pred             EEEEEEEcCCCCCcCCcEEEEECcCCCCCcCCCCCCCCCCCCeEEEEeCCCCCEEEEEECCCCcCCCCCCcHHHHHHhhh
Confidence            489999999999999999998421                  114679999999 7777777664               


Q ss_pred             ----------EEEEEeeeeeEEEEEEee
Q psy8322         555 ----------IEASKEGYELFRDRIKIP  572 (651)
Q Consensus       555 ----------l~vs~~Gy~~~~~~v~v~  572 (651)
                                +.|++.||.+.+-++-..
T Consensus       202 rh~~RpaHIHf~V~a~G~~~L~Tqlyf~  229 (277)
T cd03461         202 RHPMRPAHIHFMVTAPGYRTLVTQIFDS  229 (277)
T ss_pred             ccCCCCCeEEEEEEcCCcCceEEeEecC
Confidence                      567888887665555444

1,2-HQD blongs to the aromatic dioxygenase family, a family of mononuclear non-heme intradiol-cleaving enzymes.

>TIGR02423 protocat_alph protocatechuate 3,4-dioxygenase, alpha subunit

Probab=94.46  E-value=0.091  Score=51.35  Aligned_cols=47  Identities=21%  Similarity=0.327  Sum_probs=37.2

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee-------------------e----eeeeeCCCeeE-EeeccCceEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK-------------------N----VSFMSSQRGEY-WRVLMPGIYFI  555 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~-------------------~----~~~~Td~~G~f-~~~l~~g~y~l  555 (651)
                      .|+|+|+|.+|+||++|.|.|=-.                   .    -...||++|.| +..+.||.|..
T Consensus        41 ~l~G~V~D~~g~Pv~~A~VeiWqad~~G~Y~~~~~~~~~~~~~~f~grGr~~Td~~G~y~f~TI~Pg~Yp~  111 (193)
T TIGR02423        41 RLEGRVLDGDGHPVPDALIEIWQADAAGRYNSPADLRAPATDPGFRGWGRTGTDESGEFTFETVKPGAVPD  111 (193)
T ss_pred             EEEEEEECCCCCCCCCCEEEEEccCCCCccCCccCCcccccCCCCCCeEEEEECCCCCEEEEEEcCCCcCC
Confidence            489999999999999999998310                   0    13578999999 77788987754

This model represents the alpha chain of protocatechuate 3,4-dioxygenase. The most closely related family outside this family is that of the beta chain (TIGR02422), typically encoded in an adjacent locus. This enzyme acts in the degradation of aromatic compounds by way of p-hydroxybenzoate to succinate and acetyl-CoA.

>smart00634 BID_1 Bacterial Ig-like domain (group 1)

Probab=94.26  E-value=0.17  Score=43.18  Aligned_cols=59  Identities=17%  Similarity=0.173  Sum_probs=44.8

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee--------eeeeeCCCeeEE---eeccCceEEEEEEEeeeeeEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN--------VSFMSSQRGEYW---RVLMPGIYFIEASKEGYELFRD  567 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~--------~~~~Td~~G~f~---~~l~~g~y~l~vs~~Gy~~~~~  567 (651)
                      .|+-+|+|+.|.|++++.|.+.-..        ....||.+|...   ....+|.++|+++..|+.....
T Consensus        21 ~i~v~v~D~~Gnpv~~~~V~f~~~~~~~~~~~~~~~~Td~~G~a~~~l~~~~~G~~~vta~~~~~~~~~~   90 (92)
T smart00634       21 TLTATVTDANGNPVAGQEVTFTTPSGGALTLSKGTATTDANGIATVTLTSTTAGVYTVTASLENGSSSVK   90 (92)
T ss_pred             EEEEEEECCCCCCcCCCEEEEEECCCceeeccCCeeeeCCCCEEEEEEECCCCcEEEEEEEECCCcceee
Confidence            4889999999999999998876321        234689999972   2346788999999888865543

>cd03464 3,4-PCD_beta Protocatechuate 3,4-dioxygenase (3,4-PCD) , beta subunit

Probab=94.21  E-value=0.16  Score=50.56  Aligned_cols=46  Identities=30%  Similarity=0.490  Sum_probs=36.6

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee-----------------------eeeeeeCCCeeE-EeeccCceEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK-----------------------NVSFMSSQRGEY-WRVLMPGIYF  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~-----------------------~~~~~Td~~G~f-~~~l~~g~y~  554 (651)
                      .|+|+|+|.+|+||++|.|.|=-.                       .-...||++|.| +..+.||.|.
T Consensus        67 ~l~G~V~D~~G~PV~~A~VEIWQad~~G~Y~~~~d~~~~~~~~~f~grGr~~TD~~G~y~F~TI~Pg~Yp  136 (220)
T cd03464          67 IVHGRVLDEDGRPVPNTLVEIWQANAAGRYRHKRDQHDAPLDPNFGGAGRTLTDDDGYYRFRTIKPGAYP  136 (220)
T ss_pred             EEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCCcccccCCCCCCEEEEEECCCccEEEEEECCCCcc
Confidence            488999999999999999988421                       014478999999 7778888874

3,4-PCD catalyzes the oxidative ring cleavage of 3,4-dihydroxybenzoate to produce beta-carboxy-cis,cis-muconate. 3,4-PCDs are large aggregates of 12 protomers, each composed of an alpha- and beta-subunit and an Fe3+ ion bound in the beta-subunit at the alpha-subunit-beta-subunit interface. 3,4-PCD is a member of the aromatic dioxygenases which are non-heme iron intradiol-cleaving enzymes that break the C1-C2 bond and utilize Fe3+.

>TIGR02422 protocat_beta protocatechuate 3,4-dioxygenase, beta subunit

Probab=93.96  E-value=0.23  Score=49.52  Aligned_cols=47  Identities=30%  Similarity=0.429  Sum_probs=37.1

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee-----------------------eeeeeeCCCeeE-EeeccCceEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK-----------------------NVSFMSSQRGEY-WRVLMPGIYFI  555 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~-----------------------~~~~~Td~~G~f-~~~l~~g~y~l  555 (651)
                      .|+|+|+|.+|+||++|.|.|=-.                       .-...||++|.| +..+.||.|.+
T Consensus        62 ~l~G~V~D~~g~PV~~A~VEIWQada~G~Y~~~~d~~~~~~~~~f~grGr~~TD~~G~y~F~TI~PG~Y~~  132 (220)
T TIGR02422        62 IVHGRVLDEDGRPVPNTLVEVWQANAAGRYRHKNDQYLAPLDPNFGGVGRTLTDSDGYYRFRTIKPGPYPW  132 (220)
T ss_pred             EEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCccccccCCCCCCEEEEEECCCccEEEEEECCCCccC
Confidence            489999999999999999998421                       013568999999 77788988743

This model represents the beta chain of protocatechuate 3,4-dioxygenase. The most closely related family outside this family is that of the alpha chain (TIGR02423), typically encoded in an adjacent locus. This enzyme acts in the degradation of aromatic compounds by way of p-hydroxybenzoate to succinate and acetyl-CoA.

>COG3485 PcaH Protocatechuate 3,4-dioxygenase beta subunit [Secondary metabolites biosynthesis, transport, and catabolism]

Probab=93.74  E-value=0.1  Score=52.06  Aligned_cols=46  Identities=26%  Similarity=0.495  Sum_probs=36.5

Q ss_pred             cceeEEEEcCCCCcccceEEEEeee----------------------eeeeeeCCCeeE-EeeccCceE
Q psy8322         508 RGVKGLVLDETGSRLANVSISLAYK----------------------NVSFMSSQRGEY-WRVLMPGIY  553 (651)
Q Consensus       508 ~~i~G~V~D~~g~pi~~A~V~i~~~----------------------~~~~~Td~~G~f-~~~l~~g~y  553 (651)
                      ..|+|+|+|.+|.||++|.|.|=-.                      .-.+.||++|.| +..+.||.|
T Consensus        73 i~l~G~VlD~~G~Pv~~A~VEiWQAda~GrY~~~~d~~~~~~~~f~g~Gr~~Td~~G~y~F~Ti~Pg~y  141 (226)
T COG3485          73 ILLEGRVLDGNGRPVPDALVEIWQADADGRYSHPKDSRLAPLPNFNGRGRTITDEDGEYRFRTIKPGPY  141 (226)
T ss_pred             EEEEEEEECCCCCCCCCCEEEEEEcCCCCcccCccccccCcCccccceEEEEeCCCceEEEEEeecccc
Confidence            4599999999999999999998310                      013579999999 777888776

>PF12985 DUF3869: Domain of unknown function (DUF3869); InterPro: IPR024620 This functionally uncharacterised domain is found in bacterial sequences, including the N-terminal region of a putative pore-forming toxin (YP_001301288

Probab=92.94  E-value=0.51  Score=40.88  Aligned_cols=71  Identities=23%  Similarity=0.330  Sum_probs=47.8

Q ss_pred             hccceeEEEEc-CCCCccc-ceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeC---CCc--eE
Q psy8322         506 VHRGVKGLVLD-ETGSRLA-NVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPE---STS--PV  578 (651)
Q Consensus       506 a~~~i~G~V~D-~~g~pi~-~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~---~~~--~~  578 (651)
                      +...|.|.|.| .+|++|. ++.+.+.+..       +|.    +.++...+.+++.||.+.+.++.+++   ++.  ..
T Consensus        20 A~~tI~~tV~da~tG~~vt~~a~vti~~~~-------~~~----~A~~a~~vtas~~~y~~~~~tV~vpal~~Gq~a~~~   88 (104)
T PF12985_consen   20 AKYTIAGTVYDAETGEDVTTTATVTISAGS-------DGT----LAAKAVTVTASKDGYMTGSVTVNVPALKAGQFAVYP   88 (104)
T ss_dssp             -EEEEEEEEEETTTTEE-CGCSEEEETTCC-------CCC----E--ECCEEEEEECTCEEEEEEEEE--B-TT-EEEEE
T ss_pred             CEEEEEEEEEecCCCCeeeccceEEEccCC-------Ccc----cccccEEEEEEccCCeeeEEEEEehhhcCCceEEEe
Confidence            34579999999 7999998 8888886543       444    45666788999999999999988863   322  35


Q ss_pred             EEEEEeeee
Q psy8322         579 VGAVLESLL  587 (651)
Q Consensus       579 ~~~~L~~~~  587 (651)
                      .+|.|.+..
T Consensus        89 v~i~L~~~~   97 (104)
T PF12985_consen   89 VNIALQKEA   97 (104)
T ss_dssp             EEEEE-CTC
T ss_pred             eEEEEeecc
Confidence            677776543

1) from Bacteroides vulgatus ATCC 8482.; PDB: 3G3L_A 3KOG_A.

>PF09430 DUF2012: Protein of unknown function (DUF2012); InterPro: IPR019008 This domain is found in different proteins, including uncharacterised protein family UPF0480 and nodal modulators

Probab=92.37  E-value=0.28  Score=44.45  Aligned_cols=51  Identities=18%  Similarity=0.369  Sum_probs=41.1

Q ss_pred             ccceEEEEeeeee---eeeeCCCeeE-EeeccCceEEEEEEEeeeeeEEEEEEee
Q psy8322         522 LANVSISLAYKNV---SFMSSQRGEY-WRVLMPGIYFIEASKEGYELFRDRIKIP  572 (651)
Q Consensus       522 i~~A~V~i~~~~~---~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy~~~~~~v~v~  572 (651)
                      .+...|.|.+...   .+....||.| +.++++|.|.|.|.+..|.=....|.|.
T Consensus         7 ~~~t~V~L~~g~~~~~~~~v~~dG~F~f~~Vp~GsY~L~V~s~~~~F~~~RVdV~   61 (123)
T PF09430_consen    7 PSSTRVTLNGGQYRPISAFVRSDGSFVFHNVPPGSYLLEVHSPDYVFPPYRVDVS   61 (123)
T ss_pred             CCCEEEEEeCCCccceEEEecCCCEEEeCCCCCceEEEEEECCCccccCEEEEEe
Confidence            4567888876555   7788999999 7889999999999999886655666665

A nodal modulator has been identified as part of a protein complex that participates in the nodal signaling pathway during vertebrate development [].

>PF12866 DUF3823: Protein of unknown function (DUF3823); InterPro: IPR024278 This is a family of uncharacterised proteins from Bacteroidetes

Probab=92.06  E-value=0.59  Score=46.80  Aligned_cols=77  Identities=18%  Similarity=0.178  Sum_probs=53.0

Q ss_pred             ccceeEEEEc-CCCCccc----ceEEEEeee------eeeeeeCCCeeE-EeeccCceEEEEE-EEee---eeeEEEEEE
Q psy8322         507 HRGVKGLVLD-ETGSRLA----NVSISLAYK------NVSFMSSQRGEY-WRVLMPGIYFIEA-SKEG---YELFRDRIK  570 (651)
Q Consensus       507 ~~~i~G~V~D-~~g~pi~----~A~V~i~~~------~~~~~Td~~G~f-~~~l~~g~y~l~v-s~~G---y~~~~~~v~  570 (651)
                      ..+++|+|.| .+|+||.    ++.|.+...      ........||.| ...|=.|.|+|.+ .-.|   +...++.+.
T Consensus        21 ~s~l~G~iiD~~tgE~i~~~~~gv~i~l~e~gy~~~~~~~~~v~qDGtf~n~~lF~G~Yki~~~~G~fp~~~~~dti~v~  100 (222)
T PF12866_consen   21 DSTLTGRIIDVYTGEPIQTDIGGVRIQLYELGYGDNTPQDVYVKQDGTFRNTKLFDGDYKIVPKNGNFPWVVPVDTIEVD  100 (222)
T ss_dssp             -EEEEEEEEECCTTEE----STSSEEEEECS-CCG--SEEEEB-TTSEEEEEEE-SEEEEEEE-CTSCSBSCCE--EEEE
T ss_pred             CceEEEEEEEeecCCeeeecCCceEEEEEecccccCCCcceEEccCCceeeeeEeccceEEEEcCCCCcccCCCccEEEE
Confidence            3579999999 8898775    567777542      235567899999 7788999999999 7777   777888888


Q ss_pred             eeCCCceEEEEEEee
Q psy8322         571 IPESTSPVVGAVLES  585 (651)
Q Consensus       571 v~~~~~~~~~~~L~~  585 (651)
                      +...  +.++|..+|
T Consensus       101 i~G~--t~~d~eVtP  113 (222)
T PF12866_consen  101 IKGN--TTQDFEVTP  113 (222)
T ss_dssp             ESSC--EEEEEEE-B
T ss_pred             ecCc--eEEeEEeee
Confidence            8632  456776664

These proteins have characteristic DN and DR sequence-motifs but their function is not known.; PDB: 3HN5_B 4EIU_A.

>PF10670 DUF4198: Domain of unknown function (DUF4198)

Probab=91.07  E-value=0.59  Score=46.20  Aligned_cols=51  Identities=22%  Similarity=0.319  Sum_probs=42.0

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee---------eeeeeeCCCeeE-EeeccCceEEEEEEEe
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK---------NVSFMSSQRGEY-WRVLMPGIYFIEASKE  560 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~---------~~~~~Td~~G~f-~~~l~~g~y~l~vs~~  560 (651)
                      .+..+|. -+|+|+++|.|.+...         .....||.+|.+ +....+|.|.|.+++.
T Consensus       152 ~~~~~vl-~~GkPl~~a~V~~~~~~~~~~~~~~~~~~~TD~~G~~~~~~~~~G~wli~a~~~  212 (215)
T PF10670_consen  152 PLPFQVL-FDGKPLAGAEVEAFSPGGWYDVEHEAKTLKTDANGRATFTLPRPGLWLIRASHK  212 (215)
T ss_pred             EEEEEEE-ECCeEcccEEEEEEECCCccccccceEEEEECCCCEEEEecCCCEEEEEEEEEe
Confidence            3778887 7899999999999754         446889999999 5567899999998764

>PF11974 MG1: Alpha-2-macroglobulin MG1 domain; InterPro: IPR021868 This is the N-terminal MG1 domain from alpha-2-macroglobulin []

Probab=89.72  E-value=0.99  Score=39.04  Aligned_cols=50  Identities=20%  Similarity=0.123  Sum_probs=35.3

Q ss_pred             ceeEEEEc-CCCCcccceEEEEee-ee----eeeeeCCCeeEEeeccCceEEEEEE
Q psy8322         509 GVKGLVLD-ETGSRLANVSISLAY-KN----VSFMSSQRGEYWRVLMPGIYFIEAS  558 (651)
Q Consensus       509 ~i~G~V~D-~~g~pi~~A~V~i~~-~~----~~~~Td~~G~f~~~l~~g~y~l~vs  558 (651)
                      ++.-.|++ .+|+||++|.|.+.+ .+    ...+||.+|...+......+.+.++
T Consensus        14 ~~~v~v~~L~tg~Pv~ga~V~l~~~~~~~~l~~g~TD~~G~a~~~~~~~~~~viA~   69 (97)
T PF11974_consen   14 GLLVWVTSLSTGKPVAGAEVELYDSRNGQVLASGKTDADGFASFDSTKKPFLVIAR   69 (97)
T ss_pred             CEEEEEeeCCCCCccCCCEEEEEECCCCcEeeeeeeCCCceEEecCCCCCEEEEEE
Confidence            35567889 899999999999987 33    2567999999855443333444443

>COG5266 CbiK ABC-type Co2+ transport system, periplasmic component [Inorganic ion transport and metabolism]

Probab=89.47  E-value=1  Score=45.31  Aligned_cols=52  Identities=19%  Similarity=0.383  Sum_probs=40.8

Q ss_pred             ceeEEEEcCCCCcccceEEEEe-------e----e------eeeeeeCCCeeE-EeeccCceEEEEEEEee
Q psy8322         509 GVKGLVLDETGSRLANVSISLA-------Y----K------NVSFMSSQRGEY-WRVLMPGIYFIEASKEG  561 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~-------~----~------~~~~~Td~~G~f-~~~l~~g~y~l~vs~~G  561 (651)
                      -++|+|.|. |+||++|+|.+.       +    +      .....||.+|.| +..+..|...+.+-..+
T Consensus       173 ~f~~~vl~~-GkPv~nA~V~v~~~n~~~~d~~a~~~~~ek~~~~~~TD~kG~~~fip~r~G~W~~~~~~~~  242 (264)
T COG5266         173 VFRGKVLDN-GKPVPNATVEVEFDNIDTKDNRAKTGNTEKTALVQFTDDKGEVSFIPLRAGVWGFAVEHKT  242 (264)
T ss_pred             eEEEEEEEC-CccCCCcEEEEEEecccccccccccCCCCCcceEEEcCCCceEEEEEccCceEEEEeeccC
Confidence            489999999 999999999998       1    0      124579999999 77788888877664443

>TIGR02962 hdxy_isourate hydroxyisourate hydrolase

Probab=88.47  E-value=0.89  Score=40.40  Aligned_cols=55  Identities=24%  Similarity=0.311  Sum_probs=43.5

Q ss_pred             eeEEEEc-CCCCcccceEEEEeeee-------eeeeeCCCeeEE------eeccCceEEEEEEEeeeee
Q psy8322         510 VKGLVLD-ETGSRLANVSISLAYKN-------VSFMSSQRGEYW------RVLMPGIYFIEASKEGYEL  564 (651)
Q Consensus       510 i~G~V~D-~~g~pi~~A~V~i~~~~-------~~~~Td~~G~f~------~~l~~g~y~l~vs~~Gy~~  564 (651)
                      |+=.|.| ..|.|.+|+.|.+....       ...+||.||+..      ..+++|.|+|++..-.|-.
T Consensus         3 lstHVLDt~~G~PAagv~V~L~~~~~~~~~~i~~~~Tn~DGR~~~~l~~~~~~~~G~Y~l~F~~g~Yf~   71 (112)
T TIGR02962         3 LSTHVLDTTSGKPAAGVPVTLYRLDGSGWTPLAEGVTNADGRCPDLLPEGETLAAGIYKLRFDTGDYFA   71 (112)
T ss_pred             ceEEEEeCCCCccCCCCEEEEEEecCCCeEEEEEEEECCCCCCcCcccCcccCCCeeEEEEEEhhhhhh
Confidence            6677999 88999999999997532       146799999982      1357899999998888854

Members of this family, hydroxyisourate hydrolase, represent a distinct clade of transthyretin-related proteins. Bacterial members typically are encoded next to ureidoglycolate hydrolase and often near either xanthine dehydrogenase or xanthine/uracil permease genes and have been demonstrated to have hydroxyisourate hydrolase activity. In eukaryotes, a clade separate from the transthyretins (a family of thyroid-hormone binding proteins) has also been shown to have HIU hydrolase activity in urate catabolizing organisms. Transthyretin, then, would appear to be the recently diverged paralog of the more ancient HIUH family.

>PF06488 L_lac_phage_MSP: Lactococcus lactis bacteriophage major structural protein; InterPro: IPR010517 This family consists of several Lactococcus lactis bacteriophage F4-1 major structural proteins []

Probab=84.75  E-value=1.6  Score=42.18  Aligned_cols=37  Identities=19%  Similarity=0.352  Sum_probs=29.0

Q ss_pred             eeeCCCeeEE--eeccCceEEEEEEEeeeeeEEEEEEee
Q psy8322         536 FMSSQRGEYW--RVLMPGIYFIEASKEGYELFRDRIKIP  572 (651)
Q Consensus       536 ~~Td~~G~f~--~~l~~g~y~l~vs~~Gy~~~~~~v~v~  572 (651)
                      .+||..|.-.  -.|.+|.|++++|+.||...++.+.|+
T Consensus       260 VITnssG~~vTNgqLsaGtYtVTySAsGY~DVTqtlvVT  298 (301)
T PF06488_consen  260 VITNSSGNVVTNGQLSAGTYTVTYSASGYADVTQTLVVT  298 (301)
T ss_pred             EEEcCCCcEeecCcccCceEEEEEeccccccccceEEEe
Confidence            4566666652  248999999999999999888877664

The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.

>PF09892 DUF2119: Uncharacterized protein conserved in archaea (DUF2119); InterPro: IPR019218 This entry represents a family of hypothetical archaeal proteins of unknown function

Probab=84.25  E-value=1.7  Score=41.83  Aligned_cols=48  Identities=27%  Similarity=0.453  Sum_probs=32.8

Q ss_pred             CeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeee
Q psy8322         316 PNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAV  377 (651)
Q Consensus       316 p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~  377 (651)
                      |.=+|+||+||+||-.+.-++.-+.             ...+.+-.+.|+| +..+|.-++.
T Consensus         7 p~rLFvgGlHG~Egk~t~~iL~~l~-------------~~~~~~G~l~i~p-lv~~~kYiST   54 (193)
T PF09892_consen    7 PKRLFVGGLHGDEGKDTSPILKRLK-------------PNDFNNGNLIIIP-LVENSKYIST   54 (193)
T ss_pred             ceEEEEeeccCcchhhHHHHHHHhC-------------cccccCceEEEEe-CCCCCCceee
Confidence            8899999999999987765543332             1234457899999 4445544443

>PF00576 Transthyretin: HIUase/Transthyretin family; InterPro: IPR023416 This family includes transthyretin that is a thyroid hormone-binding protein that transports thyroxine from the bloodstream to the brain

Probab=83.09  E-value=1.4  Score=39.21  Aligned_cols=53  Identities=28%  Similarity=0.365  Sum_probs=39.9

Q ss_pred             eeEEEEc-CCCCcccceEEEEeeee--------eeeeeCCCeeE--Ee----eccCceEEEEEEEeee
Q psy8322         510 VKGLVLD-ETGSRLANVSISLAYKN--------VSFMSSQRGEY--WR----VLMPGIYFIEASKEGY  562 (651)
Q Consensus       510 i~G~V~D-~~g~pi~~A~V~i~~~~--------~~~~Td~~G~f--~~----~l~~g~y~l~vs~~Gy  562 (651)
                      |+=-|.| ..|.|..++.|.+....        ...+||.||+.  ..    .+.+|.|+|++.--.|
T Consensus         3 iStHVLDt~~G~PA~gv~V~L~~~~~~~~~~~l~~~~Td~DGR~~~~~~~~~~~~~G~Y~l~F~~~~Y   70 (112)
T PF00576_consen    3 ISTHVLDTTTGKPAAGVPVTLYRLDSDGSWTLLAEGVTDADGRIKQPLLEGESLEPGIYKLVFDTGDY   70 (112)
T ss_dssp             EEEEEEETTTTEE-TT-EEEEEEEETTSCEEEEEEEEBETTSEESSTSSETTTS-SEEEEEEEEHHHH
T ss_pred             cEEEEeeCCCCCCccCCEEEEEEecCCCCcEEEEEEEECCCCcccccccccccccceEEEEEEEHHHh
Confidence            6667999 78999999999997654        36789999998  11    3778999999876666

However, most of the sequences listed in this family do not bind thyroid hormones. They are actually enzymes of the purine catabolism that catalyse the conversion of 5-hydroxyisourate (HIU) to OHCU [, ]. HIU hydrolysis is the original function of the family and is conserved from bacteria to mammals; transthyretins arose by gene duplications in the vertebrate lineage [, ]. HIUases are distinguished in the alignment from the conserved C-terminal YRGS sequence. Transthyretin (formerly prealbumin) is one of 3 thyroid hormone-binding proteins found in the blood of vertebrates []. It is produced in the liver and circulates in the bloodstream, where it binds retinol and thyroxine (T4) []. It differs from the other 2 hormone-binding proteins (T4-binding globulin and albumin) in 3 distinct ways: (1) the gene is expressed at a high rate in the brain choroid plexus; (2) it is enriched in cerebrospinal fluid; and (3) no genetically caused absence has been observed, suggesting an essential role in brain function, distinct from that played in the bloodstream []. The protein consists of around 130 amino acids, which assemble as a homotetramer that contains an internal channel in which T4 is bound. Within this complex, T4 appears to be transported across the blood-brain barrier, where, in the choroid plexus, the hormone stimulates further synthesis of transthyretin. The protein then diffuses back into the bloodstream, where it binds T4 for transport back to the brain [].; PDB: 1TFP_B 1KGJ_D 1IE4_C 1GKE_C 1KGI_D 2H0J_B 2H0E_B 2H0F_B 1ZD6_A 3DGD_D ....

>KOG1948|consensus

Probab=83.06  E-value=2.1  Score=49.74  Aligned_cols=58  Identities=31%  Similarity=0.513  Sum_probs=48.4

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee---eeeeeeCCCeeE-EeeccCceEEEEEEEeeeeeEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK---NVSFMSSQRGEY-WRVLMPGIYFIEASKEGYELFR  566 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~---~~~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy~~~~  566 (651)
                      +|+|+|.-+-|...+++.|.+...   -..+.|+.+|.| ++++.||+|.|.+++.-.+-..
T Consensus       120 sv~GkVlgaaggGpagV~velrs~e~~iast~T~~~Gky~f~~iiPG~Yev~ashp~w~~~~  181 (1165)
T KOG1948|consen  120 SVRGKVLGAAGGGPAGVLVELRSQEDPIASTKTEDGGKYEFRNIIPGKYEVSASHPAWECIS  181 (1165)
T ss_pred             eEeeEEeeccCCCcccceeecccccCcceeeEecCCCeEEEEecCCCceEEeccCcceeEee
Confidence            599999987666668888888665   357889999999 8889999999999998876544

---

Homologous Structure Templates

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	651
1h8l_A	380	Carboxypeptidase GP180 residues 503-882; hydrolase	3e-75
1h8l_A	380	Carboxypeptidase GP180 residues 503-882; hydrolase	2e-54
1h8l_A	380	Carboxypeptidase GP180 residues 503-882; hydrolase	4e-10
1uwy_A	426	Carboxypeptidase M; metallopeptidase, GPI-anchor,	3e-74
1uwy_A	426	Carboxypeptidase M; metallopeptidase, GPI-anchor,	2e-51
1uwy_A	426	Carboxypeptidase M; metallopeptidase, GPI-anchor,	1e-09
3mn8_A	435	LP15968P; catalytic domain of alpha/beta-hydrolase	4e-71
3mn8_A	435	LP15968P; catalytic domain of alpha/beta-hydrolase	3e-57
3mn8_A	435	LP15968P; catalytic domain of alpha/beta-hydrolase	5e-11
2nsm_A	439	Carboxypeptidase N catalytic chain; caroxypeptidas	7e-56
2nsm_A	439	Carboxypeptidase N catalytic chain; caroxypeptidas	4e-42
2nsm_A	439	Carboxypeptidase N catalytic chain; caroxypeptidas	9e-24
2nsm_A	439	Carboxypeptidase N catalytic chain; caroxypeptidas	2e-11
3prt_A	323	Carboxypeptidase T; hydrolase; 1.66A {Thermoactino	1e-39
3prt_A	323	Carboxypeptidase T; hydrolase; 1.66A {Thermoactino	1e-16
3prt_A	323	Carboxypeptidase T; hydrolase; 1.66A {Thermoactino	4e-11
3prt_A	323	Carboxypeptidase T; hydrolase; 1.66A {Thermoactino	6e-05
1jqg_A	433	Carboxypeptidase A; Pro-protein, hydrolase; 2.50A	5e-26
1jqg_A	433	Carboxypeptidase A; Pro-protein, hydrolase; 2.50A	4e-08
1m4l_A	307	Carboxypeptidase A; metalloproteinase, metalloexop	1e-25
1m4l_A	307	Carboxypeptidase A; metalloproteinase, metalloexop	1e-07
3k2k_A	403	Putative carboxypeptidase; structural genomics, jo	1e-25
3k2k_A	403	Putative carboxypeptidase; structural genomics, jo	4e-19
1z5r_A	306	Procarboxypeptidase B; exopeptidase, hydrolase; 1.	2e-24
1z5r_A	306	Procarboxypeptidase B; exopeptidase, hydrolase; 1.	3e-08
2bo9_A	308	Carboxypeptidase A4; metallocarboxypeptidase, X-RA	4e-24
2bo9_A	308	Carboxypeptidase A4; metallocarboxypeptidase, X-RA	2e-07
4a37_A	388	Metallo-carboxypeptidase; metallo-protease, hydrol	5e-24
4a37_A	388	Metallo-carboxypeptidase; metallo-protease, hydrol	2e-20
4a37_A	388	Metallo-carboxypeptidase; metallo-protease, hydrol	2e-05
1aye_A	401	PCPA2, procarboxypeptidase A2; serine protease, zy	7e-24
1aye_A	401	PCPA2, procarboxypeptidase A2; serine protease, zy	6e-07
3d4u_A	309	Tafia, carboxypeptidase B2; protease-inhibitor com	1e-23
3d4u_A	309	Tafia, carboxypeptidase B2; protease-inhibitor com	6e-08
1kwm_A	402	Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A	1e-23
1kwm_A	402	Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A	3e-07
2c1c_A	312	Carboxypeptidase B; insect, metalloprotease, insen	1e-23
2c1c_A	312	Carboxypeptidase B; insect, metalloprotease, insen	9e-08
2boa_A	404	Carboxypeptidase A4; metalloprocarboxypeptidase, X	2e-23
2boa_A	404	Carboxypeptidase A4; metalloprocarboxypeptidase, X	1e-06
1pca_A	403	Procarboxypeptidase A PCPA; hydrolase(C-terminal p	3e-23
1pca_A	403	Procarboxypeptidase A PCPA; hydrolase(C-terminal p	4e-07
1dtd_A	303	Carboxypeptidase A2; carboxypeptidase A2, leech ca	8e-23
1dtd_A	303	Carboxypeptidase A2; carboxypeptidase A2, leech ca	3e-07
3dgv_A	401	TAFI, carboxypeptidase B2; blood coagulation, fibr	8e-22
3dgv_A	401	TAFI, carboxypeptidase B2; blood coagulation, fibr	8e-07
3b2y_A	275	Metallopeptidase containing CO-catalytic metalloa	6e-18
3b2y_A	275	Metallopeptidase containing CO-catalytic metalloa	1e-16
2qvp_A	275	Uncharacterized protein; putative metallopeptidase	8e-17
2qvp_A	275	Uncharacterized protein; putative metallopeptidase	6e-14
3l2n_A	395	Peptidase M14, carboxypeptidase A; putative carbox	2e-16
3l2n_A	395	Peptidase M14, carboxypeptidase A; putative carbox	2e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	2e-10
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	3e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-08
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-05
3fmc_A	368	Putative succinylglutamate desuccinylase / aspart;	8e-06
3cdx_A	354	Succinylglutamatedesuccinylase/aspartoacylase; str	9e-06
3na6_A	331	Succinylglutamate desuccinylase/aspartoacylase; st	3e-05
2qj8_A	332	MLR6093 protein; structural genomics, joint center	2e-04
2gu2_A	312	ASPA protein; aspartoacylase family, aminoacylase-	8e-04

>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* Length = 380

 Score =  245 bits (626), Expect = 3e-75
 Identities = 111/339 (32%), Positives = 172/339 (50%), Gaps = 51/339 (15%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E ++L V+ IS  P +H+ G P  K +GN+HG+E +GRE++L L+EYL   +   D  + 
Sbjct: 41  ELRELYVMEISDNPGIHEAGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNF-GTDPEVT 99

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP------------------------- 389
            L+ +TRIH++P++NPDG E + EG+     GR                           
Sbjct: 100 DLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQVTDPPQPET 159

Query: 390 ----------PFLISLFL---------PFPVTKNKPA---LTPDTDVFLHLASTYARLHP 427
                     PF++S  L         PF   +   A    +PD  VF  LA +Y++ + 
Sbjct: 160 LAVMSWLKTYPFVLSANLHGGSLVVNYPFDDDEQGIAIYSKSPDDAVFQQLALSYSKENK 219

Query: 428 TMHMKRPCP-GNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPS 486
            M+   PC        F +G+TNGA WY+  GGM D+NYL   C E+T+E+ C +YP   
Sbjct: 220 KMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKAE 279

Query: 487 EIPIHWRSNQNALISWLQQVHRGVKGLVLD-ETGSRLANVSISLAYKNVSFMSSQRGEYW 545
           E+P +W  N+ +L+ +++QVHRG+ G VLD   G  + N +IS+A  N    + + G+YW
Sbjct: 280 ELPKYWEQNRRSLLQFIKQVHRGIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYW 339

Query: 546 RVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLE 584
           R+L+ G Y + AS  GY+     +++       V   L 
Sbjct: 340 RLLVQGTYKVTASARGYDPVTKTVEVDSKGGVQVNFTLS 378

>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* Length = 380

 Score =  189 bits (482), Expect = 2e-54
 Identities = 78/192 (40%), Positives = 118/192 (61%), Gaps = 12/192 (6%)

Query: 27  NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVG 85
            +H++  M   L  +   Y ++T LYS+GKSV  ++L V+ IS  P +H+ G P  K +G
Sbjct: 9   RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIG 68

Query: 86  NIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR 145
           N+HG+E +GRE++L L+E+L   +   D  +  L+ +TRIH++P++NPDG E + EG+  
Sbjct: 69  NMHGNEVVGRELLLNLIEYLCKNF-GTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRG 127

Query: 146 SGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 205
              GRNN NN+DLNR FPD F             +    PE  AV+ W+ + PFV+S  L
Sbjct: 128 GTVGRNNSNNYDLNRNFPDQFF----------QVTDPPQPETLAVMSWLKTYPFVLSANL 177

Query: 206 HGGNVVASYPYD 217
           HGG++V +YP+D
Sbjct: 178 HGGSLVVNYPFD 189

>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A* Length = 380

 Score = 61.0 bits (148), Expect = 4e-10
 Identities = 31/81 (38%), Positives = 42/81 (51%), Gaps = 10/81 (12%)

Query: 211 VASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNS 270
             S   D      +NN NN+DLNR FPD F             +    PE  AV+ W+ +
Sbjct: 119 EKSQEGDRGGTVGRNNSNNYDLNRNFPDQFF----------QVTDPPQPETLAVMSWLKT 168

Query: 271 VPFVMSLQLHGGNVVASYPYD 291
            PFV+S  LHGG++V +YP+D
Sbjct: 169 YPFVLSANLHGGSLVVNYPFD 189

>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 Length = 426

 Score =  243 bits (622), Expect = 3e-74
 Identities = 129/393 (32%), Positives = 194/393 (49%), Gaps = 59/393 (15%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           + ++L V+ +   P  H++G+P  K V N+HGDE +GRE++L L++YLV      D  I 
Sbjct: 36  KGRNLWVLVVGRFPKEHRIGIPEFKYVANMHGDETVGRELLLHLIDYLVTSD-GKDPEIT 94

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP------------------------- 389
            L+++TRIH++P++NPDG E   + +C    GR                           
Sbjct: 95  NLINSTRIHIMPSMNPDGFEAVKKPDCYYSIGRENYNQYDLNRNFPDAFEYNNVSRQPET 154

Query: 390 ----------PFLISLFL---------PFPVTKNKPA------LTPDTDVFLHLASTYAR 424
                      F++S  L         PF              LTPD DVF +LA TYA 
Sbjct: 155 VAVMKWLKTETFVLSANLHGGALVASYPFDNGVQATGALYSRSLTPDDDVFQYLAHTYAS 214

Query: 425 LHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPA 484
            +P M     C       F NGVTNG +WY   GGM DYNY++  C E+TLE+SCC+YP 
Sbjct: 215 RNPNMKKGDECKNKM--NFPNGVTNGYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPR 272

Query: 485 PSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLA--YKNVSFMSSQRG 542
             ++P  W +N+ +LI +++QVH GVKG V D+ G+ L NV + +        + +++ G
Sbjct: 273 EEKLPSFWNNNKASLIEYIKQVHLGVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYG 332

Query: 543 EYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLESLLEFNITMTSIQNDKVG 602
           EY+ +L+PG Y I  +  G++    ++ IPE +        + LL F   + SI    V 
Sbjct: 333 EYYLLLLPGSYIINVTVPGHDPHITKVIIPEKSQNFSALKKDILLPFQGQLDSIP---VS 389

Query: 603 NASKEGYELFRDRIEIPESTSPVVGAVLESLLE 635
           N S     L+R+  +   +T P +   L SLL 
Sbjct: 390 NPSCPMIPLYRNLPDHSAATKPSLFLFLVSLLH 422

>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 Length = 426

 Score =  182 bits (464), Expect = 2e-51
 Identities = 80/201 (39%), Positives = 121/201 (60%), Gaps = 12/201 (5%)

Query: 27  NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVG 85
           NYH  + M   L+   + Y+++T L+SIGKSV G++L V+ +   P  H++G+P  K V 
Sbjct: 4   NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVA 63

Query: 86  NIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR 145
           N+HGDE +GRE++L L+++LV      D  I  L+++TRIH++P++NPDG E   + +C 
Sbjct: 64  NMHGDETVGRELLLHLIDYLVTSD-GKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDCY 122

Query: 146 SGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 205
              GR N N +DLNR FPD F +N  +            PE  AV+ W+ +  FV+S  L
Sbjct: 123 YSIGRENYNQYDLNRNFPDAFEYNNVS----------RQPETVAVMKWLKTETFVLSANL 172

Query: 206 HGGNVVASYPYDSFYGESKNN 226
           HGG +VASYP+D+    +   
Sbjct: 173 HGGALVASYPFDNGVQATGAL 193

>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1 Length = 426

 Score = 59.6 bits (144), Expect = 1e-09
 Identities = 32/81 (39%), Positives = 43/81 (53%), Gaps = 10/81 (12%)

Query: 211 VASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNS 270
            A    D +Y   + N N +DLNR FPD F +N  +            PE  AV+ W+ +
Sbjct: 114 EAVKKPDCYYSIGRENYNQYDLNRNFPDAFEYNNVSR----------QPETVAVMKWLKT 163

Query: 271 VPFVMSLQLHGGNVVASYPYD 291
             FV+S  LHGG +VASYP+D
Sbjct: 164 ETFVLSANLHGGALVASYPFD 184

>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} Length = 435

 Score =  235 bits (602), Expect = 4e-71
 Identities = 110/328 (33%), Positives = 166/328 (50%), Gaps = 65/328 (19%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E ++LL + IS       L  P VK + N+HGDE +GR++++ + +YL+  +    S++ 
Sbjct: 71  EGRNLLALQISRNTRSRNLLTPPVKYIANMHGDETVGRQLLVYMAQYLLGNH-ERISDLG 129

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP------------------------- 389
            L+++T I+L+P +NPDG  L+ EGNC S                               
Sbjct: 130 QLVNSTDIYLVPTMNPDGYALSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSHVHQL 189

Query: 390 -------------------PFLISL---------FLPF-----PVTKNKPALTPDTDVFL 416
                              PF++S            P+          + +LTPD  VF 
Sbjct: 190 RAQSRQPETAALVNWIVSKPFVLSANFHGGAVVASYPYDNSLAHNECCEESLTPDDRVFK 249

Query: 417 HLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLE 476
            LA TY+  HP M     C  +    F  G+TNGA WY  SGGM D+NY +  C ELT+E
Sbjct: 250 QLAHTYSDNHPIMRKGNNCNDS----FSGGITNGAHWYELSGGMQDFNYAFSNCFELTIE 305

Query: 477 ISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLA-YKNVS 535
           +SCC+YPA S +P  W+ N+ +L+  L+Q H G+KGLV D +G  +A+ ++ +A  +   
Sbjct: 306 LSCCKYPAASTLPQEWQRNKASLLQLLRQAHIGIKGLVTDASGFPIADANVYVAGLEEKP 365

Query: 536 FMSSQRGEYWRVLMPGIYFIEASKEGYE 563
             +S+RGEYWR+L PG+Y + AS  GY+
Sbjct: 366 MRTSKRGEYWRLLTPGLYSVHASAFGYQ 393

>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} Length = 435

 Score =  198 bits (506), Expect = 3e-57
 Identities = 71/208 (34%), Positives = 118/208 (56%), Gaps = 9/208 (4%)

Query: 23  MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNV 81
           +   +Y + + + +      + Y N  +++ +G+S+ G++LL + IS       L  P V
Sbjct: 35  LQQPHYASQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRSRNLLTPPV 94

Query: 82  KIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE 141
           K + N+HGDE +GR++++ + ++L+  +    S++  L+++T I+L+P +NPDG  L+ E
Sbjct: 95  KYIANMHGDETVGRQLLVYMAQYLLGNH-ERISDLGQLVNSTDIYLVPTMNPDGYALSQE 153

Query: 142 GNCRSG---RGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVP 198
           GNC S     GR N  N DLNR FPD    +          +QS  PE  A+++W+ S P
Sbjct: 154 GNCESLPNYVGRGNAANIDLNRDFPDRLEQSH----VHQLRAQSRQPETAALVNWIVSKP 209

Query: 199 FVMSLQLHGGNVVASYPYDSFYGESKNN 226
           FV+S   HGG VVASYPYD+    ++  
Sbjct: 210 FVLSANFHGGAVVASYPYDNSLAHNECC 237

>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster} Length = 435

 Score = 64.2 bits (156), Expect = 5e-11
 Identities = 32/84 (38%), Positives = 41/84 (48%), Gaps = 7/84 (8%)

Query: 211 VASYPYDSFYG---ESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDW 267
             S   +         + N  N DLNR FPD    +          +QS  PE  A+++W
Sbjct: 149 ALSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSH----VHQLRAQSRQPETAALVNW 204

Query: 268 MNSVPFVMSLQLHGGNVVASYPYD 291
           + S PFV+S   HGG VVASYPYD
Sbjct: 205 IVSKPFVLSANFHGGAVVASYPYD 228

>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} Length = 439

 Score =  195 bits (496), Expect = 7e-56
 Identities = 83/219 (37%), Positives = 118/219 (53%), Gaps = 13/219 (5%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGN 86
           +H YD +   L         +T +YSIG+SV G+ L V+  S  P +H+   P VK VGN
Sbjct: 6   HHRYDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFSDHPGIHEPLEPEVKYVGN 65

Query: 87  IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS 146
           +HG+E +GRE++L+L E L  E+   +  I  L+ +TRIH+LP++NPDG E+A       
Sbjct: 66  MHGNEALGRELMLQLSEFLCEEFRNRNQRIVQLIQDTRIHILPSMNPDGYEVAAAQGPNK 125

Query: 147 GR---GRNNINNHDLNRQFPDYFRH---------NRSNIPTLVSTSQSIDPEVQAVIDWM 194
                GRNN N  DLNR FPD   +            ++P   +    ++PE +AVI WM
Sbjct: 126 PGYLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNWKSQVEPETRAVIRWM 185

Query: 195 NSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLN 233
           +S  FV+S  LHGG VVA+YPYD  +      +      
Sbjct: 186 HSFNFVLSANLHGGAVVANYPYDKSFEHRVRGVRRTAST 224

>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} Length = 439

 Score =  157 bits (398), Expect = 4e-42
 Identities = 69/176 (39%), Positives = 102/176 (57%), Gaps = 4/176 (2%)

Query: 404 NKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADY 463
                TPD  +F  LA  Y+  H  M     C       F +G+TNGA+WYS S GM D+
Sbjct: 221 TASTPTPDDKLFQKLAKVYSYAHGWMFQGWNCGDY----FPDGITNGASWYSLSKGMQDF 276

Query: 464 NYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHRGVKGLVLDETGSRLA 523
           NYL+  C E+TLE+SC ++P   E+   W  N+ ALI +L+QVH+G+KG+VLD+  + LA
Sbjct: 277 NYLHTNCFEITLELSCDKFPPEEELQREWLGNKEALIQFLEQVHQGIKGMVLDQNYNNLA 336

Query: 524 NVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVV 579
           N  IS++  N    S   G+Y+R+L+PGIY + A+  GY+     + +  +   +V
Sbjct: 337 NAVISVSGINHDVTSGDHGDYFRLLLPGIYTVSATAPGYDPETVTVTVGPAEPTLV 392

>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} Length = 439

 Score =  103 bits (258), Expect = 9e-24
 Identities = 37/95 (38%), Positives = 56/95 (58%), Gaps = 1/95 (1%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E + L V+  S  P +H+   P VK VGN+HG+E +GRE++L+L E+L  E+   +  I 
Sbjct: 37  EGRHLYVLEFSDHPGIHEPLEPEVKYVGNMHGNEALGRELMLQLSEFLCEEFRNRNQRIV 96

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP 389
            L+ +TRIH+LP++NPDG E+A             
Sbjct: 97  QLIQDTRIHILPSMNPDGYEVAAAQGPNKPGYLVG 131

>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens} Length = 439

 Score = 65.8 bits (160), Expect = 2e-11
 Identities = 49/175 (28%), Positives = 72/175 (41%), Gaps = 28/175 (16%)

Query: 176 LVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH-------GGNVVAS--YPYDSFYGESKNN 226
           L    ++ +  +  +I            ++H        G  VA+   P    Y   +NN
Sbjct: 84  LCEEFRNRNQRIVQLIQ---------DTRIHILPSMNPDGYEVAAAQGPNKPGYLVGRNN 134

Query: 227 INNHDLNRQFPDYFRH---------NRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSL 277
            N  DLNR FPD   +            ++P   +    ++PE +AVI WM+S  FV+S 
Sbjct: 135 ANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNWKSQVEPETRAVIRWMHSFNFVLSA 194

Query: 278 QLHGGNVVASYPYDSFYGESKDLLVVNISTA-PVHQLGVPNVKIVGNIHGDEPIG 331
            LHGG VVA+YPYD  +      +    ST  P  +L     K+    HG    G
Sbjct: 195 NLHGGAVVANYPYDKSFEHRVRGVRRTASTPTPDDKLFQKLAKVYSYAHGWMFQG 249

>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A Length = 323

 Score =  147 bits (372), Expect = 1e-39
 Identities = 61/227 (26%), Positives = 95/227 (41%), Gaps = 19/227 (8%)

Query: 25  FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIV 84
              YHNY+ M  ++      Y N+ + +SIGKS  G++L  V IS         P V   
Sbjct: 6   DSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYT 65

Query: 85  GNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC 144
              H  E +  E+ L  L+     Y   DS I  L++N  I+++ N+NPDG E  +    
Sbjct: 66  ALHHAREHLTVEMALYTLDLFTQNY-NLDSRITNLVNNREIYIVFNINPDGGEYDISSGS 124

Query: 145 ----RSGRGRNNINNH---DLNRQFPDYFRHNR--SNIP---TLVSTSQSIDPEVQAVID 192
               R  R  N+ +++   DLNR +   +      S  P   T    S    PE  A+ D
Sbjct: 125 YKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRD 184

Query: 193 WMNSV------PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLN 233
           ++NS            +  H  + +  YPY   Y +  +++   D N
Sbjct: 185 FINSRVVGGKQQIKTLITFHTYSELILYPYSYTYTDVPSDMTQDDFN 231

>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A Length = 323

 Score = 80.5 bits (199), Expect = 1e-16
 Identities = 25/86 (29%), Positives = 37/86 (43%), Gaps = 1/86 (1%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E ++L  V IS         P V      H  E +  E+ L  L+     Y   DS I  
Sbjct: 40  EGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNY-NLDSRITN 98

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNC 381
           L++N  I+++ N+NPDG E  +    
Sbjct: 99  LVNNREIYIVFNINPDGGEYDISSGS 124

>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A Length = 323

 Score = 63.5 bits (155), Expect = 4e-11
 Identities = 21/105 (20%), Positives = 34/105 (32%), Gaps = 22/105 (20%)

Query: 409 TPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYH 468
             D +VF  +A+T A+ +                       G+  Y   GGM D+ Y  H
Sbjct: 227 QDDFNVFKTMANTMAQTNGYTP-----------------QQGSDLYIADGGMDDWAYGQH 269

Query: 469 GCLELTLEISCCR-----YPAPSEIPIHWRSNQNALISWLQQVHR 508
                T E+         YP    I      N+ A++   ++   
Sbjct: 270 KIFAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKADC 314

>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A Length = 323

 Score = 44.6 bits (106), Expect = 6e-05
 Identities = 18/72 (25%), Positives = 26/72 (36%), Gaps = 11/72 (15%)

Query: 231 DLNRQFPDYFRHNR--SNIP---TLVSTSQSIDPEVQAVIDWMNSV------PFVMSLQL 279
           DLNR +   +      S  P   T    S    PE  A+ D++NS            +  
Sbjct: 144 DLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITF 203

Query: 280 HGGNVVASYPYD 291
           H  + +  YPY 
Sbjct: 204 HTYSELILYPYS 215

>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1 Length = 433

 Score =  110 bits (276), Expect = 5e-26
 Identities = 50/227 (22%), Positives = 85/227 (37%), Gaps = 21/227 (9%)

Query: 18  RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLG 77
              + +SF   H+Y+ +   L+   + + N+  +   GKS  G+ +  + IST       
Sbjct: 111 STRSRLSFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDAS 170

Query: 78  VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
            P V +   +H  E +     L  +  LV+     D     L++N    +LP  NPDG  
Sbjct: 171 KPVVMMQSLLHCREWVTLPATLYAIHKLVI-----DVTESDLINNIDWIILPVANPDGYV 225

Query: 138 LAVEGNC--RSGRGRNNINNH-----DLNRQFPDYFRHNRSNIP---TLVSTSQSIDPEV 187
               G+   R  R    +  +     DLNR F   +    S+     T    S   +PE 
Sbjct: 226 HTFGGDRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSAFSEPES 285

Query: 188 QAVIDWMNSVP--FVMSLQLHG-GNVVASYPYDSFYGESKNNINNHD 231
             + D +        + L +H  G+++  Y Y    G   +N     
Sbjct: 286 SVIRDIIAEHRNRMALYLDIHSFGSMI-LYGYG--NGVLPSNALQLH 329

>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1 Length = 433

 Score = 54.9 bits (132), Expect = 4e-08
 Identities = 23/98 (23%), Positives = 35/98 (35%), Gaps = 7/98 (7%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E + +  + IST        P V +   +H  E +     L  +  LV+     D     
Sbjct: 152 EGRSIKYLRISTTNFQDASKPVVMMQSLLHCREWVTLPATLYAIHKLVI-----DVTESD 206

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGRTPPF 391
           L++N    +LP  NPDG      G+   R  R      
Sbjct: 207 LINNIDWIILPVANPDGYVHTFGGDRYWRKNRATGYMA 244

>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ... Length = 307

 Score =  107 bits (268), Expect = 1e-25
 Identities = 51/278 (18%), Positives = 95/278 (34%), Gaps = 26/278 (9%)

Query: 18  RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLG 77
           R     ++  YH  D + + ++     +  +     IG+S  G+ + V+  ST   ++  
Sbjct: 2   RSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNR-- 59

Query: 78  VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
            P + I   IH  E I +   +   +    +Y + D +   +LD+  I L    NPDG  
Sbjct: 60  -PAIWIDLGIHSREWITQATGVWFAKKFTEDYGQ-DPSFTAILDSMDIFLEIVTNPDGFA 117

Query: 138 LAVEGNC-----RSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSID-------- 184
                N      RS    +     D NR +   F    ++     S+  S          
Sbjct: 118 FTHSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGAS-----SSPCSETYHGKYANS 172

Query: 185 -PEVQAVIDWMNSVP-FVMSLQLHG-GNVVASYPYDSFYGESKNNINNHDLNRQFPDYFR 241
             EV++++D++     F   L +H    ++  YPY        +    + + +      +
Sbjct: 173 EVEVKSIVDFVKDHGNFKAFLSIHSYSQLL-LYPYGYTTQSIPDKTELNQVAKSAVAALK 231

Query: 242 HNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 279
                     S   +I       IDW  +     S   
Sbjct: 232 SLYGTSYKYGSIITTIYQASGGSIDWSYNQGIKYSFTF 269

>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ... Length = 307

 Score = 53.2 bits (128), Expect = 1e-07
 Identities = 20/77 (25%), Positives = 34/77 (44%), Gaps = 4/77 (5%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E + + V+  ST   ++   P + I   IH  E I +   +   +    +Y + D +   
Sbjct: 43  EGRPIYVLKFSTGGSNR---PAIWIDLGIHSREWITQATGVWFAKKFTEDYGQ-DPSFTA 98

Query: 356 LLDNTRIHLLPNLNPDG 372
           +LD+  I L    NPDG
Sbjct: 99  ILDSMDIFLEIVTNPDG 115

>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344} Length = 403

 Score =  108 bits (271), Expect = 1e-25
 Identities = 41/222 (18%), Positives = 77/222 (34%), Gaps = 25/222 (11%)

Query: 23  MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVK 82
            ++   ++ +   E L    ++      +  +G++V G+ + +V + T          V 
Sbjct: 127 YAYFEPYSEERHSEFLGAVQQMP--QASVVELGRTVEGRPMSLVVLGTPDEAGAAKKKVW 184

Query: 83  IVGNIHGDEPIGREIILRLLEHLVVEYIRGDSN-IRFLLDNTRIHLLPNLNPDGSELAVE 141
           I+   H  E +    I  L++ LV           R L D+   +++PN+NPDGS     
Sbjct: 185 IIARQHPGESMAEWFIEGLVKRLVGWGDWSGDPVARKLYDHATFYIVPNMNPDGSVH--- 241

Query: 142 GNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVM 201
                G  R N    +LNR++ +                    PEV  V D ++++   +
Sbjct: 242 -----GNLRTNAAGANLNREWME--------------PDAERSPEVLVVRDAIHAIGCDL 282

Query: 202 SLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHN 243
              +HG   +                        F D F+  
Sbjct: 283 FFDIHGDEDLPYVFAAGSEMLPGFTEQQRVEQSAFIDSFKRA 324

>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344} Length = 403

 Score = 89.1 bits (220), Expect = 4e-19
 Identities = 41/226 (18%), Positives = 65/226 (28%), Gaps = 30/226 (13%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSN-IR 354
           E + + +V + T          V I+   H  E +    I  L++ LV           R
Sbjct: 161 EGRPMSLVVLGTPDEAGAAKKKVWIIARQHPGESMAEWFIEGLVKRLVGWGDWSGDPVAR 220

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSG---------------------RGRTPPFLI 393
            L D+   +++PN+NPDGS         +G                     R        
Sbjct: 221 KLYDHATFYIVPNMNPDGSVHGNLRTNAAGANLNREWMEPDAERSPEVLVVRDAIHAIGC 280

Query: 394 SLFLPFPVTKNKP----ALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTN 449
            LF      ++ P    A +     F                +     +   + E+G   
Sbjct: 281 DLFFDIHGDEDLPYVFAAGSEMLPGFTEQQRVEQSAFIDSFKRA----SPDFQDEHGYPP 336

Query: 450 GAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSN 495
           G          + Y     GCL LTLE+         +  I W   
Sbjct: 337 GKYREDAFKLASKYIGHRFGCLSLTLEMPFKDNANLPDEHIGWNGA 382

>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ... Length = 306

 Score =  103 bits (258), Expect = 2e-24
 Identities = 48/278 (17%), Positives = 97/278 (34%), Gaps = 29/278 (10%)

Query: 21  AGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPN 80
            G S+  Y+N++ +    +  T    ++    +IG + LG ++ ++ +     ++   P 
Sbjct: 2   TGHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNK---PA 58

Query: 81  VKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAV 140
           + +    H  E I        +   V+ Y   +S++   L+    ++LP LN DG     
Sbjct: 59  IFMDCGFHAREWISHAFCQWFVREAVLTY-GYESHMTEFLNKLDFYVLPVLNIDGYIYTW 117

Query: 141 EGNC-----RSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSID---------PE 186
             N      RS          D NR F   +    ++     +                E
Sbjct: 118 TKNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGAS-----TDPCDETYCGSAAESEKE 172

Query: 187 VQAVIDWMNSV--PFVMSLQLHG-GNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHN 243
            +A+ D++ +        L +H    ++  YPY   Y   +NN   ++L +         
Sbjct: 173 TKALADFIRNNLSSIKAYLTIHSYSQMI-LYPYSYDYKLPENNAELNNLAKAAVKELATL 231

Query: 244 RSNIPTLVSTSQSIDPEVQAVIDWMNS--VPFVMSLQL 279
                T    + +I P      DW     + +  + +L
Sbjct: 232 YGTKYTYGPGATTIYPAAGGSDDWAYDQGIKYSFTFEL 269

>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ... Length = 306

 Score = 54.3 bits (131), Expect = 3e-08
 Identities = 14/79 (17%), Positives = 31/79 (39%), Gaps = 4/79 (5%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
              ++ ++ +     ++   P + +    H  E I        +   V+ Y   +S++  
Sbjct: 40  LGNNIYLLKVGKPGPNK---PAIFMDCGFHAREWISHAFCQWFVREAVLTY-GYESHMTE 95

Query: 356 LLDNTRIHLLPNLNPDGSE 374
            L+    ++LP LN DG  
Sbjct: 96  FLNKLDFYVLPVLNIDGYI 114

>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A* Length = 308

 Score =  102 bits (256), Expect = 4e-24
 Identities = 57/278 (20%), Positives = 104/278 (37%), Gaps = 27/278 (9%)

Query: 20  AAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVP 79
           +   ++G YH+ + +  E++N    + ++     IG S   + + V+  ST     +  P
Sbjct: 2   SNNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGK--GVRRP 59

Query: 80  NVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELA 139
            V +   IH  E I +   +     +V +Y + D  I  +L+   I LLP  NPDG    
Sbjct: 60  AVWLNAGIHSREWISQATAIWTARKIVSDY-QRDPAITSILEKMDIFLLPVANPDGYVYT 118

Query: 140 VEGNC-----RSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSID---------P 185
              N      RS    ++    D NR +   F    ++         S            
Sbjct: 119 QTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGAS-----DNPCSEVYHGPHANSEV 173

Query: 186 EVQAVIDWMNSVP-FVMSLQLHG-GNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHN 243
           EV++V+D++     F   + LH    ++  YPY     ++ +      + R         
Sbjct: 174 EVKSVVDFIQKHGNFKGFIDLHSYSQLL-MYPYGYSVKKAPDAEELDKVARLAAKALASV 232

Query: 244 RSNIPTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQL 279
                 +  T  ++ P   + IDW   N + F  + +L
Sbjct: 233 SGTEYQVGPTCTTVYPASGSSIDWAYDNGIKFAFTFEL 270

>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A* Length = 308

 Score = 52.0 bits (125), Expect = 2e-07
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 3/79 (3%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E++ + V+  ST     +  P V +   IH  E I +   +     +V +Y + D  I  
Sbjct: 41  ENRPMYVLKFSTGK--GVRRPAVWLNAGIHSREWISQATAIWTARKIVSDY-QRDPAITS 97

Query: 356 LLDNTRIHLLPNLNPDGSE 374
           +L+   I LLP  NPDG  
Sbjct: 98  ILEKMDIFLLPVANPDGYV 116

>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A* Length = 388

 Score =  103 bits (258), Expect = 5e-24
 Identities = 43/224 (19%), Positives = 77/224 (34%), Gaps = 33/224 (14%)

Query: 23  MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVK 82
            ++   ++ +     L         +    ++G SV G+D+ ++ +     H      + 
Sbjct: 120 FAYFEPYSRE-RHARLVERALGIEGVE-RLAVGTSVQGRDIELLRVRR---HPDSHLKLW 174

Query: 83  IVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG 142
           ++   H  E +    +  L+E L       D+ ++ LL+   ++L+PN+NPDG       
Sbjct: 175 VIAQQHPGEHMAEWFMEGLIERLQRPD---DTEMQRLLEKADLYLVPNMNPDG------- 224

Query: 143 NCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMS 202
               G  R N    DLNR + +               S    PEV  V   M      + 
Sbjct: 225 -AFHGNLRTNAAGQDLNRAWLE--------------PSAERSPEVWFVQQEMKRHGVDLF 269

Query: 203 LQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSN 246
           L +HG       P+    G   N      L R    +     + 
Sbjct: 270 LDIHGD---EEIPHVFAAGCEGNPGYTPRLERLEQRFREELMAR 310

>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A* Length = 388

 Score = 92.9 bits (230), Expect = 2e-20
 Identities = 36/226 (15%), Positives = 68/226 (30%), Gaps = 50/226 (22%)

Query: 299 DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLD 358
           D+ ++ +     H      + ++   H  E +    +  L+E L       D+ ++ LL+
Sbjct: 157 DIELLRVRR---HPDSHLKLWVIAQQHPGEHMAEWFMEGLIERLQRPD---DTEMQRLLE 210

Query: 359 NTRIHLLPNLNPDGSELAVEGNCRSG-----------RGRTP------------PFLISL 395
              ++L+PN+NPDG+         +G             R+P               + L
Sbjct: 211 KADLYLVPNMNPDGAFHGNLRTNAAGQDLNRAWLEPSAERSPEVWFVQQEMKRHGVDLFL 270

Query: 396 FLPFPVTK---------NKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENG 446
            +                 P  TP  +                 ++   P     +   G
Sbjct: 271 DIHGDEEIPHVFAAGCEGNPGYTPRLERLEQRFREELMARGEFQIRHGYP-----RSAPG 325

Query: 447 VTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHW 492
             N A   +F G         + CL  T+E+    +    E    W
Sbjct: 326 QANLALACNFVGQT-------YDCLAFTIEMPFKDHDDNPEPGTGW 364

>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A* Length = 388

 Score = 46.7 bits (110), Expect = 2e-05
 Identities = 19/83 (22%), Positives = 27/83 (32%), Gaps = 17/83 (20%)

Query: 215 PYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFV 274
           P  +F+G  + N    DLNR + +               S    PEV  V   M      
Sbjct: 222 PDGAFHGNLRTNAAGQDLNRAWLE--------------PSAERSPEVWFVQQEMKRHGVD 267

Query: 275 MSLQLHGGNVVASYPYDSFYGES 297
           + L +HG       P+    G  
Sbjct: 268 LFLDIHGD---EEIPHVFAAGCE 287

>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A Length = 401

 Score =  103 bits (258), Expect = 7e-24
 Identities = 54/279 (19%), Positives = 104/279 (37%), Gaps = 27/279 (9%)

Query: 18  RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLG 77
             +   +FG YH  + + +E++N    +  +    +IG S   + + V+  ST       
Sbjct: 95  ERSGNFNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGG----D 150

Query: 78  VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
            P + +   IH  E + +   L     +V +Y + D +I  +LD   I LLP  NPDG  
Sbjct: 151 KPAIWLDAGIHAREWVTQATALWTANKIVSDYGK-DPSITSILDALDIFLLPVTNPDGYV 209

Query: 138 LAVEGN--CRSGRGRNNINN---HDLNRQFPDYFRHNRSNIPTLVSTSQSID-------- 184
            +   N   R  R + + +     D NR +   F    ++     S   S          
Sbjct: 210 FSQTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGAS-----SNPCSDSYHGPSANS 264

Query: 185 -PEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRH 242
             EV++++D++ S       + LH  + +  +PY     +  +     ++ ++     R 
Sbjct: 265 EVEVKSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTKLDDFDELSEVAQKAAQSLRS 324

Query: 243 NRSNIPTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQL 279
                  +      I       IDW     + +  + +L
Sbjct: 325 LHGTKYKVGPICSVIYQASGGSIDWSYDYGIKYSFAFEL 363

>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A Length = 401

 Score = 50.9 bits (122), Expect = 6e-07
 Identities = 24/85 (28%), Positives = 38/85 (44%), Gaps = 5/85 (5%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E++ + V+  ST        P + +   IH  E + +   L     +V +Y + D +I  
Sbjct: 136 ENRPMNVLKFSTGG----DKPAIWLDAGIHAREWVTQATALWTANKIVSDYGK-DPSITS 190

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGN 380
           +LD   I LLP  NPDG   +   N
Sbjct: 191 ILDALDIFLLPVTNPDGYVFSQTKN 215

>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A Length = 309

 Score =  100 bits (252), Expect = 1e-23
 Identities = 59/278 (21%), Positives = 104/278 (37%), Gaps = 24/278 (8%)

Query: 20  AAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVP 79
           A+   +  YH+ + +   +E  T  Y +M E   IG S     L V+ +S     Q    
Sbjct: 1   ASSSYYEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKE--QRAKN 58

Query: 80  NVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELA 139
            + I   IH  E I     L  +  +   Y   +     LL +   +++P +N DG +  
Sbjct: 59  AMWIDCGIHAREWISPAFCLWFVGSVTYYY-GKEKMHTNLLKHMDFYIMPVVNVDGYDYT 117

Query: 140 VEGNC-----RSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQS-------IDPEV 187
            + +      RS   +N     DLNR F    +H      +  S S+         +PEV
Sbjct: 118 WKKDRMWRKNRSLHEKNACVGTDLNRNFA--SKHWCGEGASSSSCSEIYCGTYPESEPEV 175

Query: 188 QAVIDWMNSV--PFVMSLQLHG-GNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR 244
           +AV D++          + +H     +  +PY      SK++     + R+      +  
Sbjct: 176 KAVADFLRRNIKHIKAYISMHSYSQKI-VFPYSYSRSRSKDHEELSLVAREAVFAMENIH 234

Query: 245 SNIPTLV-STSQSIDPEVQAVIDWM--NSVPFVMSLQL 279
            NI     S S+S+        DW+    + +  + +L
Sbjct: 235 RNIRYTHGSGSESLYLAPGGSDDWIYDLGIKYSFTFEL 272

>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A Length = 309

 Score = 54.0 bits (130), Expect = 6e-08
 Identities = 18/77 (23%), Positives = 29/77 (37%), Gaps = 3/77 (3%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E   L V+ +S     Q     + I   IH  E I     L  +  +   Y   +     
Sbjct: 40  EKYPLYVLKVSKKE--QRAKNAMWIDCGIHAREWISPAFCLWFVGSVTYYY-GKEKMHTN 96

Query: 356 LLDNTRIHLLPNLNPDG 372
           LL +   +++P +N DG
Sbjct: 97  LLKHMDFYIMPVVNVDG 113

>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A Length = 402

 Score =  102 bits (256), Expect = 1e-23
 Identities = 37/231 (16%), Positives = 76/231 (32%), Gaps = 31/231 (13%)

Query: 18  RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLG 77
             A G S+  Y+ ++ +    +        +     IG +  G+ + ++ +  A  ++  
Sbjct: 94  VRATGHSYEKYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKAGQNK-- 151

Query: 78  VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
            P + +    H  E I        +   V  Y   +  +  LL+    ++LP LN DG  
Sbjct: 152 -PAIFMDCGFHAREWISPAFCQWFVREAVRTY-GREIQVTELLNKLDFYVLPVLNIDGYI 209

Query: 138 LAVEGNC-----RSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSID-------- 184
                +      RS    ++    D NR F   +    ++                    
Sbjct: 210 YTWTKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGAS-----RNPCDETYCGPAAES 264

Query: 185 -PEVQAVIDWMNSVP--FVMSLQLHG-GNVVASYPYDSFYGESKNNINNHD 231
             E +A+ D++ +        L +H    ++  YP    Y  +     N+ 
Sbjct: 265 EKETKALADFIRNKLSSIKAYLTIHSYSQMM-IYP----YSYAYKLGENNA 310

>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A Length = 402

 Score = 52.1 bits (125), Expect = 3e-07
 Identities = 16/86 (18%), Positives = 32/86 (37%), Gaps = 4/86 (4%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E + + ++ +  A  ++   P + +    H  E I        +   V  Y   +  +  
Sbjct: 135 EGRAIYLLKVGKAGQNK---PAIFMDCGFHAREWISPAFCQWFVREAVRTY-GREIQVTE 190

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNC 381
           LL+    ++LP LN DG       + 
Sbjct: 191 LLNKLDFYVLPVLNIDGYIYTWTKSR 216

>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1 Length = 312

 Score =  100 bits (252), Expect = 1e-23
 Identities = 59/279 (21%), Positives = 101/279 (36%), Gaps = 29/279 (10%)

Query: 23  MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVK 82
           + + NY   +++ E L+     Y ++  + +  +S  G+ +  + IST        P + 
Sbjct: 1   LPYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIF 60

Query: 83  IVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG 142
           I G IH  E I    +   +  LV +          LL+     LLP +NPDG +     
Sbjct: 61  IDGGIHAREWISPPSVTWAIHKLVEDV-----TENDLLEKFDWILLPVVNPDGYKYTFTN 115

Query: 143 NCRSGRG-RNNINNH--------DLNRQFPDYFRHNR-SNIP---TLVSTSQSIDPEVQA 189
             R  R  R+  NN         D NR F   +     SN P       TS   + E + 
Sbjct: 116 E-RFWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTSAFSEVETRV 174

Query: 190 VIDWMNS--VPFVMSLQLHG-GNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSN 246
           V D ++       + L +H  G+++  YP+      S+N +  H +        + N   
Sbjct: 175 VRDILHEHLARMALYLTMHSFGSMI-LYPWGHDGSLSQNALGLHTVGVAMASVIQSNALP 233

Query: 247 IPTLVSTSQSIDPEVQAV----IDWM--NSVPFVMSLQL 279
                +   S       +     D+     VP   + +L
Sbjct: 234 NFPPYTVGNSALVIGYYIAGSSEDYAHSIGVPLSYTYEL 272

>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1 Length = 312

 Score = 53.1 bits (128), Expect = 9e-08
 Identities = 22/79 (27%), Positives = 32/79 (40%), Gaps = 5/79 (6%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E + +  + IST        P + I G IH  E I    +   +  LV +          
Sbjct: 37  EGRPIKYIKISTTNFEDENKPVIFIDGGIHAREWISPPSVTWAIHKLVEDV-----TEND 91

Query: 356 LLDNTRIHLLPNLNPDGSE 374
           LL+     LLP +NPDG +
Sbjct: 92  LLEKFDWILLPVVNPDGYK 110

>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 Length = 404

 Score =  102 bits (255), Expect = 2e-23
 Identities = 58/280 (20%), Positives = 105/280 (37%), Gaps = 27/280 (9%)

Query: 18  RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLG 77
           R +   ++G YH+ + +  E++N    + ++     IG S   + + V+  ST    +  
Sbjct: 96  RSSNNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGVRR- 154

Query: 78  VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
            P V +   IH  E I +   +     +V +Y + D  I  +L+   I LLP  NPDG  
Sbjct: 155 -PAVWLNAGIHSREWISQATAIWTARKIVSDY-QRDPAITSILEKMDIFLLPVANPDGYV 212

Query: 138 LAVEGN-----CRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSID-------- 184
                N      RS    ++    D NR +   F    ++         S          
Sbjct: 213 YTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGAS-----DNPCSEVYHGPHANS 267

Query: 185 -PEVQAVIDWMNSVP-FVMSLQLHG-GNVVASYPYDSFYGESKNNINNHDLNRQFPDYFR 241
             EV++V+D++     F   + LH    ++  YPY     ++ +      + R       
Sbjct: 268 EVEVKSVVDFIQKHGNFKGFIDLHSYSQLL-MYPYGYSVKKAPDAEELDKVARLAAKALA 326

Query: 242 HNRSNIPTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQL 279
                   +  T  ++ P   + IDW   N + F  + +L
Sbjct: 327 SVSGTEYQVGPTCTTVYPASGSSIDWAYDNGIKFAFTFEL 366

>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 Length = 404

 Score = 50.2 bits (120), Expect = 1e-06
 Identities = 24/85 (28%), Positives = 37/85 (43%), Gaps = 3/85 (3%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E++ + V+  ST    +   P V +   IH  E I +   +     +V +Y + D  I  
Sbjct: 137 ENRPMYVLKFSTGKGVRR--PAVWLNAGIHSREWISQATAIWTARKIVSDY-QRDPAITS 193

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGN 380
           +L+   I LLP  NPDG       N
Sbjct: 194 ILEKMDIFLLPVANPDGYVYTQTQN 218

>1pca_A Procarboxypeptidase A PCPA; hydrolase(C-terminal peptidase); HET: CIT; 2.00A {Sus scrofa} SCOP: d.58.3.1 PDB: 1pyt_A Length = 403

 Score =  101 bits (253), Expect = 3e-23
 Identities = 48/280 (17%), Positives = 98/280 (35%), Gaps = 28/280 (10%)

Query: 18  RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLG 77
           R  +  ++  YH  + + + ++     +  +     IG+S  G+ + V+  ST   ++  
Sbjct: 97  RTTSTFNYATYHTLEEIYDFMDILVAEHPALVSKLQIGRSYEGRPIYVLKFSTGGSNR-- 154

Query: 78  VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
            P + I   IH  E I +   +   + +   Y   +S+   +LD+  I L    NP+G  
Sbjct: 155 -PAIWIDSGIHSREWITQASGVWFAKKITENY-GQNSSFTAILDSMDIFLEIVTNPNGFA 212

Query: 138 LAVEGNC-----RSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSID-------- 184
                N      RS    +     D NR +   F    ++     S+  +          
Sbjct: 213 FTHSDNRLWRKTRSKASGSLCVGSDSNRNWDAGFGGAGAS-----SSPCAETYHGKYPNS 267

Query: 185 -PEVQAVIDWMNS-VPFVMSLQLHG-GNVVASYPYDSFYGESKNNINNHDLNRQFPDYFR 241
             EV+++ D++ +       + +H    ++  YPY        +    + + +      +
Sbjct: 268 EVEVKSITDFVKNNGNIKAFISIHSYSQLL-LYPYGYKTQSPADKSELNQIAKSAVAALK 326

Query: 242 HNRSNIPTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQL 279
                     S    I      VIDW     + +  S +L
Sbjct: 327 SLYGTSYKYGSIITVIYQASGGVIDWTYNQGIKYSFSFEL 366

>1pca_A Procarboxypeptidase A PCPA; hydrolase(C-terminal peptidase); HET: CIT; 2.00A {Sus scrofa} SCOP: d.58.3.1 PDB: 1pyt_A Length = 403

 Score = 51.7 bits (124), Expect = 4e-07
 Identities = 20/85 (23%), Positives = 35/85 (41%), Gaps = 4/85 (4%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E + + V+  ST   ++   P + I   IH  E I +   +   + +   Y   +S+   
Sbjct: 138 EGRPIYVLKFSTGGSNR---PAIWIDSGIHSREWITQASGVWFAKKITENY-GQNSSFTA 193

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGN 380
           +LD+  I L    NP+G       N
Sbjct: 194 ILDSMDIFLEIVTNPNGFAFTHSDN 218

>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1 Length = 303

 Score = 98.6 bits (246), Expect = 8e-23
 Identities = 53/275 (19%), Positives = 101/275 (36%), Gaps = 30/275 (10%)

Query: 24  SFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKI 83
           +FG YH  + + +E++N    +  +    +IG S   + + V+  ST        P + +
Sbjct: 2   NFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGG----DKPAIWL 57

Query: 84  VGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGN 143
              IH  E + +   L     +V +Y   D +I  +LD   I LLP  NPDG   +   N
Sbjct: 58  DAGIHAREWVTQATALWTANKIVSDY-GKDPSITSILDALDIFLLPVTNPDGYVFSQTKN 116

Query: 144 C--RSGRGRNNINNH----DLNRQFPDYFRHNRSNIPTLVSTSQSID---------PEVQ 188
              R  R + +  +     D NR +   F    ++     S   S            EV+
Sbjct: 117 RMWRKTRSKVSAGSLCVGVDPNRNWDAGFGGPGAS-----SNPCSDSYHGPSANSEVEVK 171

Query: 189 AVIDWMNSVP-FVMSLQLHG-GNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSN 246
           +++D++ S       + LH    ++  +PY     +  +     ++ ++           
Sbjct: 172 SIVDFIKSHGKVKAFIILHSYSQLL-MFPYGYKCTKLDDFDELSEVAQKAAQSLSRLHGT 230

Query: 247 IPTLVSTSQSIDPEVQAVIDWMNS--VPFVMSLQL 279
              +      I       IDW     + +  + +L
Sbjct: 231 KYKVGPICSVIYQASGGSIDWSYDYGIKYSFAFEL 265

>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1 Length = 303

 Score = 51.6 bits (124), Expect = 3e-07
 Identities = 23/77 (29%), Positives = 35/77 (45%), Gaps = 5/77 (6%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E++ + V+  ST        P + +   IH  E + +   L     +V +Y   D +I  
Sbjct: 37  ENRPMNVLKFSTGG----DKPAIWLDAGIHAREWVTQATALWTANKIVSDY-GKDPSITS 91

Query: 356 LLDNTRIHLLPNLNPDG 372
           +LD   I LLP  NPDG
Sbjct: 92  ILDALDIFLLPVTNPDG 108

>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A* Length = 401

 Score = 97.2 bits (242), Expect = 8e-22
 Identities = 59/280 (21%), Positives = 104/280 (37%), Gaps = 24/280 (8%)

Query: 18  RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLG 77
             A+   +  YH+ + +   +E  T  Y +M E   IG S     L V+ +S     Q  
Sbjct: 91  PRASSSYYEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKE--QRA 148

Query: 78  VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
              + I   IH  E I     L  +  +   Y   +     LL +   +++P +N DG +
Sbjct: 149 KNAMWIDCGIHAREWISPAFCLWFVGSVTYYY-GKEKMHTNLLKHMDFYIMPVVNVDGYD 207

Query: 138 LAVEGNC-----RSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQS-------IDP 185
              + +      RS   +N     DLNR F    +H      +  S S+         +P
Sbjct: 208 YTWKKDRMWRKNRSLHEKNACVGTDLNRNFA--SKHWCGEGASSSSCSEIYCGTYPESEP 265

Query: 186 EVQAVIDWMNSV--PFVMSLQLHG-GNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRH 242
           EV+AV D++          + +H     +  +PY      SK++     + R+      +
Sbjct: 266 EVKAVADFLRRNIKHIKAYISMHSYSQKI-VFPYSYSRSRSKDHEELSLVAREAVFAMEN 324

Query: 243 NRSNIPTLV-STSQSIDPEVQAVIDWM--NSVPFVMSLQL 279
              NI     S S+S+        DW+    + +  + +L
Sbjct: 325 IHRNIRYTHGSGSESLYLAPGGSDDWIYDLGIKYSFTFEL 364

>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A* Length = 401

 Score = 50.6 bits (121), Expect = 8e-07
 Identities = 18/85 (21%), Positives = 32/85 (37%), Gaps = 3/85 (3%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E   L V+ +S     Q     + I   IH  E I     L  +  +   Y   +     
Sbjct: 132 EKYPLYVLKVSKKE--QRAKNAMWIDCGIHAREWISPAFCLWFVGSVTYYY-GKEKMHTN 188

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGN 380
           LL +   +++P +N DG +   + +
Sbjct: 189 LLKHMDFYIMPVVNVDGYDYTWKKD 213

>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A* Length = 275

 Score = 83.3 bits (205), Expect = 6e-18
 Identities = 39/241 (16%), Positives = 63/241 (26%), Gaps = 48/241 (19%)

Query: 297 SKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFL 356
           S D   +N+  +   +  +P++ I    HG+E  G   +L  L  L              
Sbjct: 48  SVDSFAINLYQSASQRSDLPSLLISSGFHGEEAAGPWGMLHFLRGLQPAL---------- 97

Query: 357 LDNTRIHLLPNLNPDGSELAVEGN----------CRSGRGRTPPFLISLFLPFPVTKNKP 406
            +   + LLP +NP G +     N                 TP    SL     +   + 
Sbjct: 98  FERVNLSLLPLVNPTGFKAGHRFNRFGENPNRGFTLENGKPTPNEHTSLEGKLLLEHAQL 157

Query: 407 ALTPDTDVFLHLASTYAR-------LHPTMHMKRPCPG------------NTVLKFENGV 447
                 D  L                 PT    R   G                  E  V
Sbjct: 158 LCAASRDGILTCHEDVLMNETYVYSFEPTQTPGRFSLGLRDALGQYFKLAKDGFIDECPV 217

Query: 448 TNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIH--WRSNQNALISWLQQ 505
           T+G  +  F      +       L    E        P +       ++N  A+  ++  
Sbjct: 218 TDGVIFNHFDTSFEAFLVRSGAKLAACSE-------TPGQEDFDRRVQANSAAMGQFIAH 270

Query: 506 V 506
            
Sbjct: 271 C 271

>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A* Length = 275

 Score = 79.5 bits (195), Expect = 1e-16
 Identities = 28/189 (14%), Positives = 54/189 (28%), Gaps = 28/189 (14%)

Query: 29  HNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIH 88
              + +             +    +   SV    + +   ++    +  +P++ I    H
Sbjct: 20  CQSNDIDAFYAQLAEEVNRLGLKKNTLGSVDSFAINLYQSAS---QRSDLPSLLISSGFH 76

Query: 89  GDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGR 148
           G+E  G   +L  L  L               +   + LLP +NP G +           
Sbjct: 77  GEEAAGPWGMLHFLRGLQPAL----------FERVNLSLLPLVNPTGFKAGH-------- 118

Query: 149 GRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH-G 207
            R N    + NR F        +  PT    +      +      + +      L  H  
Sbjct: 119 -RFNRFGENPNRGFT-----LENGKPTPNEHTSLEGKLLLEHAQLLCAASRDGILTCHED 172

Query: 208 GNVVASYPY 216
             +  +Y Y
Sbjct: 173 VLMNETYVY 181

>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis} Length = 275

 Score = 80.1 bits (197), Expect = 8e-17
 Identities = 31/224 (13%), Positives = 58/224 (25%), Gaps = 44/224 (19%)

Query: 314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGS 373
           G+PN+ I    HG+E  G   +L  L  L  E                + +LP +NP G 
Sbjct: 64  GLPNLLISAGFHGEESAGPWGLLHFLSQLDGEL----------FKRVNLSVLPLVNPTGF 113

Query: 374 EL--------------AVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLA 419
                               N ++  G        + L         +          + 
Sbjct: 114 AKGHRFNELGENPNRGFFIENGKAKPGADTSAEGRILLEHAHLLQVASRDGILTCHEDVL 173

Query: 420 STYARLHPTMHMKRP--------------CPGNTVLKFEN-GVTNGAAWYSFSGGMADYN 464
            T   ++     + P               P       +N  V +G  +  F      + 
Sbjct: 174 MTDTYVYTFEPSQAPGRFSHSLRDALGQYFPIAADGDVDNCPVRSGVIFNHFDTSFESFL 233

Query: 465 YLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVHR 508
                 +    E      P    +     +N  A+ +++  +  
Sbjct: 234 VRSGARVGCCSET-----PGQQPLDQRILANAAAMNTFVNMLAP 272

>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis} Length = 275

 Score = 71.7 bits (175), Expect = 6e-14
 Identities = 34/172 (19%), Positives = 59/172 (34%), Gaps = 25/172 (14%)

Query: 36  EELENFTRVYANMTELYSIGKSVLGK-DLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIG 94
            +++ F  + A  TE   +G  +LG+     + +  +P  + G+PN+ I    HG+E  G
Sbjct: 22  TDIQRFYSLLAIETERLGLGSKILGQAGHHPLYLLQSPGQKAGLPNLLISAGFHGEESAG 81

Query: 95  REIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNIN 154
              +L  L  L  E                + +LP +NP G              R N  
Sbjct: 82  PWGLLHFLSQLDGEL----------FKRVNLSVLPLVNPTGFAK---------GHRFNEL 122

Query: 155 NHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 206
             + NR F      N    P   ++++     +      +        L  H
Sbjct: 123 GENPNRGFF---IENGKAKPGADTSAEGR--ILLEHAHLLQVASRDGILTCH 169

>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans} Length = 395

 Score = 81.0 bits (199), Expect = 2e-16
 Identities = 39/224 (17%), Positives = 76/224 (33%), Gaps = 36/224 (16%)

Query: 23  MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVK 82
           +++   ++Y+   + +         +     +G ++ G+D+ +V +           ++ 
Sbjct: 125 IAYFTPYSYERHLDLISAVQ--LHPLVSTEHLGLTLDGRDMTLVKVGD---DDPSKKSIW 179

Query: 83  IVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG 142
           I    H  E +   ++  LL  L+          + LLD    +++PN+NPDG       
Sbjct: 180 ITARQHPGETMAEWLVEGLLNQLLDND---CPTSKALLDKANFYIVPNMNPDG------- 229

Query: 143 NCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMS 202
               G  R N    +LNR++                 S    PEV  V++ M+     + 
Sbjct: 230 -SVRGHLRTNAVGANLNREWQTP--------------SLERSPEVYYVVNKMHETGVDLF 274

Query: 203 LQLHGGNVVASYPYDSFYGESKNNINNH---DLNRQFPDYFRHN 243
             +HG       PY    G       +     L + F       
Sbjct: 275 YDVHGD---EGLPYVFLAGCEGIPNYSDKLASLQQDFVAALSLA 315

>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans} Length = 395

 Score = 55.9 bits (134), Expect = 2e-08
 Identities = 36/252 (14%), Positives = 71/252 (28%), Gaps = 49/252 (19%)

Query: 295 GESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           G + D   + +           ++ I    H  E +   ++  LL  L+          +
Sbjct: 155 GLTLDGRDMTLVKVGDDDPSKKSIWITARQHPGETMAEWLVEGLLNQLLDND---CPTSK 211

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSG----RGRTPPFL-----------------I 393
            LLD    +++PN+NPDGS          G    R    P L                 +
Sbjct: 212 ALLDKANFYIVPNMNPDGSVRGHLRTNAVGANLNREWQTPSLERSPEVYYVVNKMHETGV 271

Query: 394 SLFLPFPVTKNKP--------ALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFEN 445
            LF      +  P         +   +D    L   +        +          + E 
Sbjct: 272 DLFYDVHGDEGLPYVFLAGCEGIPNYSDKLASLQQDFVAA-----LSLASA---DFQTEF 323

Query: 446 GVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHW---------RSNQ 496
           G        +      ++      CL  TLE+        ++    W          ++ 
Sbjct: 324 GYDKDEPGKANLTVACNWVANTFKCLSNTLEMPFKDNANLADPFQGWSPERSVYFGEASL 383

Query: 497 NALISWLQQVHR 508
            A+ + + ++ +
Sbjct: 384 IAMRAVIDKIGQ 395

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 62.9 bits (152), Expect = 2e-10
 Identities = 56/436 (12%), Positives = 120/436 (27%), Gaps = 133/436 (30%)

Query: 277 LQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVK-IVGNIHGDEPIGREII 335
            Q    ++++ +  D+F     +    ++   P   L    +  I+              
Sbjct: 14  HQYQYKDILSVF-EDAF---VDNFDCKDVQDMPKSILSKEEIDHIIM-----SKDAVSGT 64

Query: 336 LRLLEYL------VVEYIRGDS---NIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRG 386
           LRL   L      +V+    +    N +FL+    I          + + +E   R    
Sbjct: 65  LRLFWTLLSKQEEMVQKFVEEVLRINYKFLMS--PIKTEQRQPSMMTRMYIE--QRDRLY 120

Query: 387 RTPPFLISLFLPFPVTKNKP---------ALTPDTDVFLH---------LASTYARLHPT 428
                   +F  + V++ +P          L P  +V +          +A      +  
Sbjct: 121 NDNQ----VFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKV 176

Query: 429 MHMKRPCPGNTVLKFENGVTNGAAWYSFS------GGMADYNYLYHGCLELTLEISCCRY 482
                        K +  +     W +          +     L +      ++ +    
Sbjct: 177 -----------QCKMDFKI----FWLNLKNCNSPETVLEMLQKLLY-----QIDPNWTSR 216

Query: 483 P-APSEIPIHWRSNQNALISWLQQVHRGVKGL-VLDETGSRLANVS-------------- 526
               S I +   S Q  L   L +       L VL        NV               
Sbjct: 217 SDHSSNIKLRIHSIQAEL-RRLLKSKPYENCLLVLL-------NVQNAKAWNAFNLSCKI 268

Query: 527 -ISLAYKNVS-FMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKI-----PE---STS 576
            ++  +K V+ F+S+    +  +    +       E   L    +       P    +T+
Sbjct: 269 LLTTRFKQVTDFLSAATTTHISLDHHSMTLTPD--EVKSLLLKYLDCRPQDLPREVLTTN 326

Query: 577 PVVGAVL-ESLLEFNITMT---SIQNDKVGNA------------SKEGYE---LFRDRIE 617
           P   +++ ES+ +   T      +  DK+                ++ ++   +F     
Sbjct: 327 PRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAH 386

Query: 618 IPESTSPVVGAVLESL 633
           IP         +L  +
Sbjct: 387 IPT-------ILLSLI 395

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 56.4 bits (135), Expect = 3e-08
 Identities = 90/641 (14%), Positives = 179/641 (27%), Gaps = 149/641 (23%)

Query: 27  NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPV-HQLGVPNVKIVG 85
            Y   D++    + F   +    +   +      +D+    +S   + H +   +     
Sbjct: 15  QYQYKDILSVFEDAFVDNF----DCKDV------QDMPKSILSKEEIDHIIMSKDA---- 60

Query: 86  NIHGDEPIGR--EIILRLLEHLVVEYIRG--DSNIRFLLDNTRIHLLPNLNPDGSELAVE 141
                    R    +L   E +V +++      N +FL+    I          + + +E
Sbjct: 61  ----VSGTLRLFWTLLSKQEEMVQKFVEEVLRINYKFLMS--PIKTEQRQPSMMTRMYIE 114

Query: 142 GNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMN----SV 197
                   R+ + N   N+ F  Y          L      + P    +ID +     + 
Sbjct: 115 -------QRDRLYND--NQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTW 165

Query: 198 PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSI 257
             +     +   V     +  F+   KN  +   +             N  +    S +I
Sbjct: 166 VALDVCLSYK--VQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNI 223

Query: 258 DPEVQAVIDW----MNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQL 313
              + ++       + S P+   L L   NV  +  +++F    K +L+          L
Sbjct: 224 KLRIHSIQAELRRLLKSKPYENCL-LVLLNVQNAKAWNAFNLSCK-ILLTTRFKQVTDFL 281

Query: 314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGS 373
                  +   H    +  + +  LL             +++L  + R   LP       
Sbjct: 282 SAATTTHISLDHHSMTLTPDEVKSLL-------------LKYL--DCRPQDLP------- 319

Query: 374 ELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPA-----LTPDTDVFLH-LASTYARLHP 427
              +  N         P  +S+       ++  A        + D     + S+   L P
Sbjct: 320 REVLTTN---------PRRLSIIAES--IRDGLATWDNWKHVNCDKLTTIIESSLNVLEP 368

Query: 428 TMHMKRPCPGNTVLKFENGV-----TNGAAWY--SFSGGMADYNYLYHGCLELTLEISCC 480
             +  R       + F              W+    S  M   N L+   L   +E    
Sbjct: 369 AEY--RKMFDRLSV-FPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSL---VE---- 418

Query: 481 RYPAPSEIPIH-----WRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVS 535
           + P  S I I       +            +HR +           + + +I   + +  
Sbjct: 419 KQPKESTISIPSIYLELKVKLEN----EYALHRSI-----------VDHYNIPKTFDSDD 463

Query: 536 FMSSQRGEYWRVLMPGIYF--------IEASKEGYELFRD--------RIKIPESTSP-- 577
            +     +Y+       Y         IE  +    LFR           KI   ++   
Sbjct: 464 LIPPYLDQYF-------YSHIGHHLKNIEHPER-MTLFRMVFLDFRFLEQKIRHDSTAWN 515

Query: 578 VVGAVLESLLEFNITMTSIQ-NDKVGNASKEGYELFRDRIE 617
             G++L +L +       I  ND            F  +IE
Sbjct: 516 ASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIE 556

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 55.2 bits (132), Expect = 6e-08
 Identities = 81/502 (16%), Positives = 155/502 (30%), Gaps = 162/502 (32%)

Query: 10  LQTALVLLRPAA-----GMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLL 64
           L+ AL+ LRPA      G+  G                            GK+ +  D+ 
Sbjct: 140 LRQALLELRPAKNVLIDGV-LG---------------------------SGKTWVALDVC 171

Query: 65  VVNISTAPVHQLGVPNVKI----VGNIHGDEPIGREIILRLLEHLVVEY-IRGD--SNIR 117
                +  V      + KI    + N +  E +  E++ +LL  +   +  R D  SNI+
Sbjct: 172 ----LSYKVQC--KMDFKIFWLNLKNCNSPETV-LEMLQKLLYQIDPNWTSRSDHSSNIK 224

Query: 118 FLLDNTRIHL---------------LPNLNPDGSEL-AVEGNCR---SGRGRNNINNHDL 158
             + + +  L               L N+  +     A   +C+   + R +        
Sbjct: 225 LRIHSIQAELRRLLKSKPYENCLLVLLNVQ-NAKAWNAFNLSCKILLTTRFKQVT----- 278

Query: 159 NRQFPDYFRHNRSNIPTLVSTSQSIDPE--VQAVIDWMNSV------------PFVMSL- 203
                D+     +   +L   S ++ P+     ++ +++              P  +S+ 
Sbjct: 279 -----DFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSII 333

Query: 204 --QLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHN---------RSNIPTLVS 252
              +  G       +     +    I    LN   P  +R            ++IPT++ 
Sbjct: 334 AESIRDGLATWDN-WKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVFPPSAHIPTILL 392

Query: 253 T---SQSIDPEVQAVI-----------DWMNSVPFVMSLQ------------LHGGNVVA 286
           +      I  +V  V+               S   + S+             LH  ++V 
Sbjct: 393 SLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALH-RSIVD 451

Query: 287 SYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIH--GDEPIGREIILRLLEYLVV 344
            Y     + +S DL+   +       +G          H    E   R  + R++ +L  
Sbjct: 452 HYNIPKTF-DSDDLIPPYLDQYFYSHIGH---------HLKNIEHPERMTLFRMV-FL-- 498

Query: 345 EYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGR----TPPF--LISLFLP 398
                  + RF L+    H     N  GS L      +  +       P +  L++  L 
Sbjct: 499 -------DFRF-LEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILD 550

Query: 399 F-PVTKNKPALTPDTDVFLHLA 419
           F P  +     +  TD+ L +A
Sbjct: 551 FLPKIEENLICSKYTDL-LRIA 571

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 47.5 bits (112), Expect = 1e-05
 Identities = 85/602 (14%), Positives = 171/602 (28%), Gaps = 191/602 (31%)

Query: 30  NYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVV---NISTA-PVHQLGV------P 79
           NY  +   ++   R  + MT +Y   +  L  D  V    N+S   P  +L        P
Sbjct: 90  NYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRP 149

Query: 80  NVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELA 139
              ++  I G    G+         + ++       ++  +D  +I  L NL        
Sbjct: 150 AKNVL--IDGVLGSGKTW-------VALDVCL-SYKVQCKMDF-KIFWL-NL-------- 189

Query: 140 VEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPF 199
              NC S                P+      + +  L      IDP   +  D  +++  
Sbjct: 190 --KNCNS----------------PE------TVLEMLQKLLYQIDPNWTSRSDHSSNIK- 224

Query: 200 VMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFP---------------DYFRHNR 244
              L++H                 +  +     ++ +                + F    
Sbjct: 225 ---LRIH---------------SIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAF---- 262

Query: 245 SNI--PTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFY-GESKDLL 301
            N+    L++T          V D++++            ++   +   +    E K LL
Sbjct: 263 -NLSCKILLTTRFK------QVTDFLSAA--------TTTHISLDHHSMTLTPDEVKSLL 307

Query: 302 --VVNISTA--PVHQLGV-P-NVKIVGNIHGDEPIG------------REIILRLLEYLV 343
              ++      P   L   P  + I+     D                  II   L  L 
Sbjct: 308 LKYLDCRPQDLPREVLTTNPRRLSIIAESIRDGLATWDNWKHVNCDKLTTIIESSLNVLE 367

Query: 344 VEYIRGDSNIRF-----LLDNTRI--HLL----PNLNPDGSELAVEGNCRSG--RGRTPP 390
               R      F        +  I   LL     ++      + V    +      +   
Sbjct: 368 PAEYRK----MFDRLSVFPPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKE 423

Query: 391 FLISLFLPFPVTKNKPALTPDTDVFLH--LASTYARLHPTMHMKRPCPGNTVLKFENGVT 448
             IS+   +   K K     + +  LH  +   Y         K     + +  + +   
Sbjct: 424 STISIPSIYLELKVK----LENEYALHRSIVDHYNIP------KTFDSDDLIPPYLDQ-- 471

Query: 449 NGAAWYSFSGGMADYNYL-YH-GCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQV 506
                Y        Y+++ +H   +E    ++  R      + + +R        +L+Q 
Sbjct: 472 -----YF-------YSHIGHHLKNIEHPERMTLFR-----MVFLDFR--------FLEQK 506

Query: 507 HRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFR 566
            R       + +GS L  +     YK   ++     +Y R++   + F+   K    L  
Sbjct: 507 IRHD-STAWNASGSILNTLQQLKFYKP--YICDNDPKYERLVNAILDFLP--KIEENLIC 561

Query: 567 DR 568
            +
Sbjct: 562 SK 563

>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A* Length = 368

 Score = 47.6 bits (112), Expect = 8e-06
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 13/87 (14%)

Query: 79  PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 138
           P+V I  N+HG E  G  +I +L++ L    + G            I L+P  NP G   
Sbjct: 34  PSVYIQANVHGAEVQGNAVIYQLMKLLEHYELLG-----------DISLVPLANPLGIN- 81

Query: 139 AVEGNCRSGRGRNNINNHDLNRQFPDY 165
              G    GR  + I   + NR++ D+
Sbjct: 82  QKSGEFTLGR-FDPITGVNWNREYLDH 107

>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2} Length = 354

 Score = 47.2 bits (111), Expect = 9e-06
 Identities = 23/86 (26%), Positives = 36/86 (41%), Gaps = 19/86 (22%)

Query: 79  PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 138
           P V + G +HGDE  G+  I  L   L  E ++G           R+ +LP +N    + 
Sbjct: 54  PTVLLTGGVHGDEYEGQIAISDLARRLRPEEVQG-----------RVIMLPAVNMPAIQ- 101

Query: 139 AVEGNCRSGRGRNNINNHDLNRQFPD 164
                    R  + ++  D+NR FP 
Sbjct: 102 ------SDTR-LSPVDGRDINRCFPG 120

>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP} Length = 331

 Score = 45.2 bits (106), Expect = 3e-05
 Identities = 19/86 (22%), Positives = 29/86 (33%), Gaps = 19/86 (22%)

Query: 79  PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 138
               + G  HGDE  G   +  L      E + G           R+ ++P  N      
Sbjct: 50  KTALLTGANHGDEYEGPVALQELAATTRAEDVTG-----------RLIIVPYFNYPA--- 95

Query: 139 AVEGNCRSGRGRNNINNHDLNRQFPD 164
                 R+    + I+  +LNR FP 
Sbjct: 96  -----FRASARTSPIDRGNLNRAFPG 116

>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti} Length = 332

 Score = 42.9 bits (100), Expect = 2e-04
 Identities = 43/271 (15%), Positives = 88/271 (32%), Gaps = 30/271 (11%)

Query: 72  PVHQLG---VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLL 128
           PV        P++ I G  HG+E  G  +  RL++ L      G           RI ++
Sbjct: 36  PVFSCNRGEGPSLLITGGNHGNELQGPILARRLVKWLPEAQRCG-----------RIIIV 84

Query: 129 PNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQ 188
           P +NP           ++      I+  +LNR FP     + S      + S+ + P V 
Sbjct: 85  PEINPLA--------VQAWTRNTPIDGKNLNRVFPGRSDGSVSE-RIADAISRLLLPVVD 135

Query: 189 AVIDW------MNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRH 242
            V+D        +  P ++S  +   + +      S   +    +               
Sbjct: 136 TVLDLHSFGPTWDCAPSIISHPIADIDQMTKTVSISKAFKLPVTLLWEHNETDGMFDTLV 195

Query: 243 NRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVM-SLQLHGGNVVASYPYDSFYGESKDLL 301
           +R     + +         +A+  +   V   + +L L  G            G++ +  
Sbjct: 196 HRQGKTFICTEFGGGVVSAEALTIYEAGVRNGLIALGLVKGKAEYPTFRQQKTGQTLETT 255

Query: 302 VVNISTAPVHQLGVPNVKIVGNIHGDEPIGR 332
             +   +P   +  P   ++  +   + +G 
Sbjct: 256 SSDQLKSPSPGIFEPRCSVMDEVEQGDVVGV 286

>2gu2_A ASPA protein; aspartoacylase family, aminoacylase-2, ACY-2, ACY2_RAT, STRU genomics, PSI, protein structure initiative; HET: MSE; 1.80A {Rattus norvegicus} SCOP: c.56.5.7 PDB: 2q4z_A 2i3c_A 2q51_A 2o4h_A* 2o53_A Length = 312

 Score = 41.0 bits (95), Expect = 8e-04
 Identities = 23/96 (23%), Positives = 35/96 (36%), Gaps = 22/96 (22%)

Query: 69  STAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLL 128
           ST+ V +  +  + I G  HG+E  G  ++   L++   E  R    ++  + N R    
Sbjct: 1   STSCVAEEPIKKIAIFGGTHGNELTGVFLVTHWLKNG-AEVHRAGLEVKPFITNPR---- 55

Query: 129 PNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPD 164
                     AVE   R           DLNR F  
Sbjct: 56  ----------AVEKCTRYID-------CDLNRVFDL 74

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	651
3mn8_A	435	LP15968P; catalytic domain of alpha/beta-hydrolase	100.0
1h8l_A	380	Carboxypeptidase GP180 residues 503-882; hydrolase	100.0
1uwy_A	426	Carboxypeptidase M; metallopeptidase, GPI-anchor,	100.0
2nsm_A	439	Carboxypeptidase N catalytic chain; caroxypeptidas	100.0
3dgv_A	401	TAFI, carboxypeptidase B2; blood coagulation, fibr	100.0
3v38_A	326	Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Th	100.0
3prt_A	323	Carboxypeptidase T; hydrolase; 1.66A {Thermoactino	100.0
1z5r_A	306	Procarboxypeptidase B; exopeptidase, hydrolase; 1.	100.0
1dtd_A	303	Carboxypeptidase A2; carboxypeptidase A2, leech ca	100.0
1kwm_A	402	Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A	100.0
3d4u_A	309	Tafia, carboxypeptidase B2; protease-inhibitor com	100.0
2c1c_A	312	Carboxypeptidase B; insect, metalloprotease, insen	100.0
1jqg_A	433	Carboxypeptidase A; Pro-protein, hydrolase; 2.50A	100.0
1aye_A	401	PCPA2, procarboxypeptidase A2; serine protease, zy	100.0
1m4l_A	307	Carboxypeptidase A; metalloproteinase, metalloexop	100.0
2bo9_A	308	Carboxypeptidase A4; metallocarboxypeptidase, X-RA	100.0
2boa_A	404	Carboxypeptidase A4; metalloprocarboxypeptidase, X	100.0
1pca_A	403	Procarboxypeptidase A PCPA; hydrolase(C-terminal p	100.0
3k2k_A	403	Putative carboxypeptidase; structural genomics, jo	100.0
3l2n_A	395	Peptidase M14, carboxypeptidase A; putative carbox	100.0
4a37_A	388	Metallo-carboxypeptidase; metallo-protease, hydrol	100.0
2qvp_A	275	Uncharacterized protein; putative metallopeptidase	100.0
1m4l_A	307	Carboxypeptidase A; metalloproteinase, metalloexop	100.0
2bo9_A	308	Carboxypeptidase A4; metallocarboxypeptidase, X-RA	100.0
1aye_A	401	PCPA2, procarboxypeptidase A2; serine protease, zy	100.0
2boa_A	404	Carboxypeptidase A4; metalloprocarboxypeptidase, X	100.0
1pca_A	403	Procarboxypeptidase A PCPA; hydrolase(C-terminal p	100.0
4axv_A	243	MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi}	99.97
3b2y_A	275	Metallopeptidase containing CO-catalytic metalloa	99.97
3v38_A	326	Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Th	99.94
3dgv_A	401	TAFI, carboxypeptidase B2; blood coagulation, fibr	99.93
3prt_A	323	Carboxypeptidase T; hydrolase; 1.66A {Thermoactino	99.92
3mn8_A	435	LP15968P; catalytic domain of alpha/beta-hydrolase	99.92
1h8l_A	380	Carboxypeptidase GP180 residues 503-882; hydrolase	99.92
1dtd_A	303	Carboxypeptidase A2; carboxypeptidase A2, leech ca	99.92
1kwm_A	402	Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A	99.91
1z5r_A	306	Procarboxypeptidase B; exopeptidase, hydrolase; 1.	99.91
3d4u_A	309	Tafia, carboxypeptidase B2; protease-inhibitor com	99.91
1uwy_A	426	Carboxypeptidase M; metallopeptidase, GPI-anchor,	99.9
2c1c_A	312	Carboxypeptidase B; insect, metalloprotease, insen	99.89
2nsm_A	439	Carboxypeptidase N catalytic chain; caroxypeptidas	99.89
1jqg_A	433	Carboxypeptidase A; Pro-protein, hydrolase; 2.50A	99.89
2qvp_A	275	Uncharacterized protein; putative metallopeptidase	99.88
3k2k_A	403	Putative carboxypeptidase; structural genomics, jo	99.85
3l2n_A	395	Peptidase M14, carboxypeptidase A; putative carbox	99.84
4axv_A	243	MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi}	99.84
4a37_A	388	Metallo-carboxypeptidase; metallo-protease, hydrol	99.79
3b2y_A	275	Metallopeptidase containing CO-catalytic metalloa	99.66
3fmc_A	368	Putative succinylglutamate desuccinylase / aspart;	99.65
2qj8_A	332	MLR6093 protein; structural genomics, joint center	99.6
3cdx_A	354	Succinylglutamatedesuccinylase/aspartoacylase; str	99.59
3na6_A	331	Succinylglutamate desuccinylase/aspartoacylase; st	99.33
1yw6_A	335	Succinylglutamate desuccinylase; alpha-beta protei	99.32
3cdx_A	354	Succinylglutamatedesuccinylase/aspartoacylase; str	99.24
2qj8_A	332	MLR6093 protein; structural genomics, joint center	99.21
2bco_A	350	Succinylglutamate desuccinylase; NESG, VPR14, stru	99.16
3fmc_A	368	Putative succinylglutamate desuccinylase / aspart;	99.08
1yw4_A	341	Succinylglutamate desuccinylase; alpha-beta protei	99.01
2gu2_A	312	ASPA protein; aspartoacylase family, aminoacylase-	99.0
3na6_A	331	Succinylglutamate desuccinylase/aspartoacylase; st	98.95
3nh4_A	327	Aspartoacylase-2; mercapturates, hydrolase; 2.00A	98.75
1yw6_A	335	Succinylglutamate desuccinylase; alpha-beta protei	98.2
2bco_A	350	Succinylglutamate desuccinylase; NESG, VPR14, stru	98.04
1yw4_A	341	Succinylglutamate desuccinylase; alpha-beta protei	97.99
2gu2_A	312	ASPA protein; aspartoacylase family, aminoacylase-	97.92
3nh4_A	327	Aspartoacylase-2; mercapturates, hydrolase; 2.00A	97.51
1nkg_A	508	Rhamnogalacturonase B; polysaccharide lyase, carbo	97.42
3e8v_A	82	Possible transglutaminase-family protein; structur	96.85
2xsu_A	312	Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE	96.43
2boy_A	254	3-chlorocatechol 1,2-dioxygenase; beta barrel, oxi	95.92
2azq_A	311	Catechol 1,2-dioxygenase; CTD, lipid, isozyme, int	95.69
3th1_A	260	Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxy	95.62
1tmx_A	293	Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidor	95.12
1dmh_A	311	1,2-CTD, catechol 1,2-dioxygenase; aromatic hydroc	95.04
3n9t_A	290	PNPC; phospholipid binds, N-terminal helix tunnel,	94.95
3o5u_A	257	Chlorocatechol 1,2-dioxygenase; beta barrel,oxidor	94.78
3kcp_A	321	Cellulosomal-scaffolding protein A; dockerin, X-mo	94.7
3hhy_A	280	1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich,	94.28
2bum_B	241	Protocatechuate 3,4-dioxygenase beta chain; oxidor	94.26
2bum_A	209	Protocatechuate 3,4-dioxygenase alpha chain; oxido	94.0
3t63_A	200	3,4-PCD, protocatechuate 3,4-dioxygenase alpha cha	93.97
3t63_M	238	3,4-PCD, protocatechuate 3,4-dioxygenase beta chai	93.55
3irp_X	429	URO-adherence factor A; DEV-IGG fold, cell WALL, h	92.4
3g3l_A	327	Putative uncharacterized membrane-associated PROT;	90.19
1ti6_B	274	Pyrogallol hydroxytransferase small subunit; molyb	88.88
1xpn_A	170	Hypothetical protein PA1324; B-barrel, structural	86.6
4eiu_A	249	Uncharacterized hypothetical protein; PF12866 fami	84.16
3qva_A	116	Transthyretin-like protein; transthyretin-related	84.03
3qec_A	150	Putative carbohydrate binding protein; suramin bin	83.22
2ww8_A	893	RRGA, cell WALL surface anchor family protein; IGG	82.5
1cwv_A	492	Invasin; integrin-binding protein, INV gene, struc	80.32

>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}

Probab=100.00  E-value=8e-79  Score=664.82  Aligned_cols=391  Identities=37%  Similarity=0.696  Sum_probs=340.0

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHH
Q psy8322          19 PAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREI   97 (651)
Q Consensus        19 ~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~   97 (651)
                      +...+.|.+||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++ .+..+||.|+++||+|||||+|+++
T Consensus        31 ~~~~~~~~~Y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~is~~~~~~~~~kp~v~i~~giHg~E~~g~~~  110 (435)
T 3mn8_A           31 DESFLQQPHYASQEQLEDLFAGLEKAYPNQAKVHFLGRSLEGRNLLALQISRNTRSRNLLTPPVKYIANMHGDETVGRQL  110 (435)
T ss_dssp             CCGGGSSCCCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTSCEEEEEEECSCTTSCCTTCCEEEEECCSSTTCCHHHHH
T ss_pred             hhhccCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEeeEccCCCEEEEEEEeCCCCccccCCCEEEEEecCCCCChhHHHH
Confidence            344568999999999999999999999999999999999999999999999876 3446799999999999999999999


Q ss_pred             HHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccC--CC-CCCCccCcCCCCCCCcccCCCCCCCC
Q psy8322          98 ILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS--GR-GRNNINNHDLNRQFPDYFRHNRSNIP  174 (651)
Q Consensus        98 ~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~--~~-~r~n~~GvDLNRnf~~~w~~~~s~~p  174 (651)
                      +++|+++|+.+| +.|++++.||++++|+|||++|||||+++++++|.+  ++ +|.||+|||||||||++|...++   
T Consensus       111 ~l~l~~~L~~~y-~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~r~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~---  186 (435)
T 3mn8_A          111 LVYMAQYLLGNH-ERISDLGQLVNSTDIYLVPTMNPDGYALSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSHV---  186 (435)
T ss_dssp             HHHHHHHHHHHT-TTCHHHHHHHHHCEEEEESCSCHHHHHTSCTTCSSCCGGGTTTSCTTCCCGGGCSCCTTC-------
T ss_pred             HHHHHHHHHHhc-cCCHHHHHhhhCeEEEEEeCcCCChhhhhccCccccCCCCCCCccccCCCcccCCCcccCcccc---
Confidence            999999999998 789999999999999999999999999999999843  33 68999999999999999976532   


Q ss_pred             CCCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcccccc
Q psy8322         175 TLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTS  254 (651)
Q Consensus       175 ~y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  254 (651)
                       +.|+.|++|||++|+++|++++++.+++|+||++++++|||++++...+                              
T Consensus       187 -~~g~~~~sepEt~al~~~~~~~~~~~~idlHs~~~~~~yPy~~~~~~~~------------------------------  235 (435)
T 3mn8_A          187 -HQLRAQSRQPETAALVNWIVSKPFVLSANFHGGAVVASYPYDNSLAHNE------------------------------  235 (435)
T ss_dssp             -----CCCSCHHHHHHHHHHTTSCCCEEEEEECSSCEEEESCSCCSSCCS------------------------------
T ss_pred             -cCCCCccchHHHHHHHHHHhhcCCEEEEEEeCCCeEEEcCCCCCccccc------------------------------
Confidence             4678899999999999999999999999999999999999999632200                              


Q ss_pred             ccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHH
Q psy8322         255 QSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREI  334 (651)
Q Consensus       255 ~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~  334 (651)
                                                      .+                                              
T Consensus       236 --------------------------------~~----------------------------------------------  237 (435)
T 3mn8_A          236 --------------------------------CC----------------------------------------------  237 (435)
T ss_dssp             --------------------------------BS----------------------------------------------
T ss_pred             --------------------------------cc----------------------------------------------
Confidence                                            00                                              


Q ss_pred             HHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHH
Q psy8322         335 ILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDV  414 (651)
Q Consensus       335 ~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~  414 (651)
                                                                                            ....+||++.
T Consensus       238 ----------------------------------------------------------------------~~~~~pd~~~  247 (435)
T 3mn8_A          238 ----------------------------------------------------------------------EESLTPDDRV  247 (435)
T ss_dssp             ----------------------------------------------------------------------CCCCCTTHHH
T ss_pred             ----------------------------------------------------------------------ccCCCCCHHH
Confidence                                                                                  0013799999


Q ss_pred             HHHHHHHhhccCCCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhh
Q psy8322         415 FLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRS  494 (651)
Q Consensus       415 f~~l~~~~a~~~~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~  494 (651)
                      |+.||..|+..|+.|+.+..|.    ..|..|++|++.|||++|+|+||+|..++|++||+||+|+|||++++++.+|..
T Consensus       248 ~~~la~~~a~~~~~m~~~~~c~----~~f~~G~~nga~~Y~~~G~~~D~~Y~~~~~~~~T~EL~~~k~p~~~~l~~~w~~  323 (435)
T 3mn8_A          248 FKQLAHTYSDNHPIMRKGNNCN----DSFSGGITNGAHWYELSGGMQDFNYAFSNCFELTIELSCCKYPAASTLPQEWQR  323 (435)
T ss_dssp             HHHHHHHHHHTSTTTTTSCGGG----CCCGGGEEEHHHHBCCSSCHHHHHHHHSSCEEEEEECCSSSSCCGGGHHHHHHH
T ss_pred             HHHHHHHHHHhhHHhhcCCCcc----ccCCCCcccCceEeecCCchhhhhhhcCCceEEEEEeccccCCccccceeEEee
Confidence            9999999999999999877883    467899999999999999999999999999999999999999999999999999


Q ss_pred             chHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeee-eeeeeeCCCeeEEeeccCceEEEEEEEeee-eeEEEEEEee
Q psy8322         495 NQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYK-NVSFMSSQRGEYWRVLMPGIYFIEASKEGY-ELFRDRIKIP  572 (651)
Q Consensus       495 nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~-~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy-~~~~~~v~v~  572 (651)
                      |+++++.++++++.+|+|+|+|++|+||++|+|.|++. +++++||.+|.|++.|+||+|+|+|+++|| ++.++.|+|.
T Consensus       324 n~~~ll~~~~~~~~gv~G~V~D~~G~pi~gA~V~v~g~~~~~~~Td~~G~y~~~l~pG~Y~l~vs~~Gy~~~~~~~v~v~  403 (435)
T 3mn8_A          324 NKASLLQLLRQAHIGIKGLVTDASGFPIADANVYVAGLEEKPMRTSKRGEYWRLLTPGLYSVHASAFGYQTSAPQQVRVT  403 (435)
T ss_dssp             HHHHHHHHHHGGGSSEEEEEECSSSCBCTTCEEEETTCTTSCEECCTTCEEEECCCSEEEEEEEEBTTBCCCCCEEEEEC
T ss_pred             chhhhccccccccceeEEEEECCCCCccCceEEEEecccccceEeCCCCeEEEecCCCcEEEEEEEcccccceEEEEEEe
Confidence            99999999999999999999999999999999999995 889999999999888999999999999999 7777788887


Q ss_pred             CCC--ceEEEEEEeeeeeeeEEEEEe
Q psy8322         573 EST--SPVVGAVLESLLEFNITMTSI  596 (651)
Q Consensus       573 ~~~--~~~~~~~L~~~~~~~~~v~~~  596 (651)
                      .+.  ...++|.|++...++.+|++.
T Consensus       404 ~~~~~~~~~~~~L~~~~~~L~~v~~~  429 (435)
T 3mn8_A          404 NDNQEALRLDFKLAPVETNFDGISSF  429 (435)
T ss_dssp             CCSSSCEECCEECCBC----------
T ss_pred             cCCcceeEEEEEEeecCCCCCeeEec
Confidence            655  447899999987776666554

>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*

Probab=100.00  E-value=3.2e-71  Score=597.59  Aligned_cols=374  Identities=39%  Similarity=0.745  Sum_probs=336.4

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHH
Q psy8322          20 AAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREII   98 (651)
Q Consensus        20 ~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~   98 (651)
                      ...+++ +||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++ .+..+||.|+|+||+||+||+|++++
T Consensus         3 ~~~~~~-~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~~~~~~~~p~v~i~~giHg~E~~g~~~~   81 (380)
T 1h8l_A            3 VQPVDF-RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIGNMHGNEVVGRELL   81 (380)
T ss_dssp             CCCCCC-SCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEESSSTTCCCTTCCEEEEECCSSTTCCHHHHHH
T ss_pred             cCCcCC-ccCCHHHHHHHHHHHHHHCCCcEEEEECCcCCCCCEEEEEEEcCCCccccCCCceEEEEcccCCCchhHHHHH
Confidence            345677 9999999999999999999999999999999999999999999865 34457999999999999999999999


Q ss_pred             HHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCC
Q psy8322          99 LRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVS  178 (651)
Q Consensus        99 l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G  178 (651)
                      ++|+++|+.+| +.|++++.||++++|+|||++|||||++.++++|.|.++|.||.|+|||||||..|...         
T Consensus        82 ~~l~~~L~~~y-~~~~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~w~k~R~n~~GvDLNRnf~~~~~~~---------  151 (380)
T 1h8l_A           82 LNLIEYLCKNF-GTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQV---------  151 (380)
T ss_dssp             HHHHHHHHHHT-TTCHHHHHHHHHCEEEEESCSCHHHHHTCCTTCSSCCTTTSCTTSCCGGGCSCCSSSCC---------
T ss_pred             HHHHHHHHHhh-CCCHHHHHHHhccEEEEEeccCCccceecccCCCCccCCCCCCCCCcccCCCccccccc---------
Confidence            99999999998 78999999999999999999999999999999998777899999999999999999743         


Q ss_pred             CCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcccccccccc
Q psy8322         179 TSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSID  258 (651)
Q Consensus       179 ~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (651)
                       ...+|||+++++++++++++++++|+|+++++++|||++++...                                   
T Consensus       152 -~~~sepEt~a~~~~~~~~~~~~~idlH~~~~~~~~py~~~~~~~-----------------------------------  195 (380)
T 1h8l_A          152 -TDPPQPETLAVMSWLKTYPFVLSANLHGGSLVVNYPFDDDEQGI-----------------------------------  195 (380)
T ss_dssp             -CSCCCHHHHHHHHHHHHSCEEEEEEEECSEEEEEESCSCCTTCS-----------------------------------
T ss_pred             -CCCCChHHHHHHHHHHhCCceEEEEEecCCEEEEecCCCCCCcc-----------------------------------
Confidence             23489999999999999999999999999999999999963110                                   


Q ss_pred             ccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHH
Q psy8322         259 PEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRL  338 (651)
Q Consensus       259 ~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~  338 (651)
                                                 ..|                                                  
T Consensus       196 ---------------------------~~~--------------------------------------------------  198 (380)
T 1h8l_A          196 ---------------------------AIY--------------------------------------------------  198 (380)
T ss_dssp             ---------------------------SSC--------------------------------------------------
T ss_pred             ---------------------------ccc--------------------------------------------------
Confidence                                       011                                                  


Q ss_pred             HHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHH
Q psy8322         339 LEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHL  418 (651)
Q Consensus       339 ~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l  418 (651)
                                                                                          ..+|+.+.|+.|
T Consensus       199 --------------------------------------------------------------------~~~~d~~~~~~l  210 (380)
T 1h8l_A          199 --------------------------------------------------------------------SKSPDDAVFQQL  210 (380)
T ss_dssp             --------------------------------------------------------------------CCCTTHHHHHHH
T ss_pred             --------------------------------------------------------------------CCCCCHHHHHHH
Confidence                                                                                125778889999


Q ss_pred             HHHhhccCCCCcCCCCCCCCcc-ccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchH
Q psy8322         419 ASTYARLHPTMHMKRPCPGNTV-LKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQN  497 (651)
Q Consensus       419 ~~~~a~~~~~~~~~~~~~~~~~-~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~  497 (651)
                      +..++..|..|+.+.+|...+. ..|..|++|++.||+++|+++||+|..++|++||+||+|+++|++++++.+|++|++
T Consensus       211 a~~~~~~~~~~~~~~~~~~~~~~~~~~~gi~~~~~~Y~~~G~~~D~~y~~~~~~~~T~EL~~~~~P~~~~l~~~w~~n~~  290 (380)
T 1h8l_A          211 ALSYSKENKKMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKAEELPKYWEQNRR  290 (380)
T ss_dssp             HHHHHTTSHHHHTTCSCTTTSTTCCCGGGEEEHHHHCCCCSCHHHHHHHHSSCEEEEEEEESCSSCCGGGHHHHHHHHHH
T ss_pred             HHHHHHhCcccccCCCcccccccccccccccccceeeccCCChhhhhhhcCCeEEEEEEecCCCCCCHHHHHHHHHHHHH
Confidence            9999888888877777865432 456789999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhccceeEEEEcC-CCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCc
Q psy8322         498 ALISWLQQVHRGVKGLVLDE-TGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTS  576 (651)
Q Consensus       498 all~~~aqa~~~i~G~V~D~-~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~  576 (651)
                      +++.++.+++.+|+|+|+|+ +|+||++|+|.|.+..++++||.+|.|.+.|++|+|+|+|+++||++.++.|.+..++.
T Consensus       291 ~l~~~~~~v~~~i~G~V~D~~~g~pi~~A~V~v~~~~~~~~Td~~G~y~~~l~~G~Y~l~vs~~Gy~~~~~~v~v~~~~~  370 (380)
T 1h8l_A          291 SLLQFIKQVHRGIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYDPVTKTVEVDSKGG  370 (380)
T ss_dssp             HHHHHHHGGGCEEEEEEEETTTCSBCTTCEEEETTEEEEEECCTTSEEEECCCSEEEEEEEECTTBCCEEEEEEECSSCE
T ss_pred             HHhhhhhhccccceEEEEeCCCCCccCceEEEEecCcceeEECCCEEEEEecCCCcEEEEEEEcCccceEEEEEEcCCCe
Confidence            99999999999999999995 99999999999999889999999999977899999999999999999998888887776


Q ss_pred             eEEEEEEee
Q psy8322         577 PVVGAVLES  585 (651)
Q Consensus       577 ~~~~~~L~~  585 (651)
                      ..++|.|++
T Consensus       371 ~~~~~~L~~  379 (380)
T 1h8l_A          371 VQVNFTLSR  379 (380)
T ss_dssp             EECCEEECB
T ss_pred             EEEEEEecc
Confidence            677888864

>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1

Probab=100.00  E-value=3.6e-71  Score=604.32  Aligned_cols=383  Identities=41%  Similarity=0.763  Sum_probs=337.6

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRL  101 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~  101 (651)
                      ++| +||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++ .+..+||.|+|+||+|||||+|++++++|
T Consensus         1 ~~f-~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~~~~~~~~p~v~i~agiHg~E~~g~~~~~~l   79 (426)
T 1uwy_A            1 LDF-NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVANMHGDETVGRELLLHL   79 (426)
T ss_dssp             CCS-SCCCHHHHHHHHHHHHHHTTTSEEEEEEEECTTSCEEEEEEESSSTTSCBTTBCEEEEEECCSTTCCHHHHHHHHH
T ss_pred             CCc-ccCCHHHHHHHHHHHHHHCCCcEEEEEccccCCCCEEEEEEEcCCCccccCCCceEEEecccCCCChhHHHHHHHH
Confidence            356 8999999999999999999999999999999999999999999865 33467999999999999999999999999


Q ss_pred             HHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCC
Q psy8322         102 LEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQ  181 (651)
Q Consensus       102 ~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~  181 (651)
                      +++|+.+| +.|++++.+|++++|+|||++|||||+++++++|.|..+|.||.|+|||||||..|...          .|
T Consensus        80 ~~~L~~~y-~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~w~~~R~n~~GvDLNRnf~~~w~~~----------~~  148 (426)
T 1uwy_A           80 IDYLVTSD-GKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDCYYSIGRENYNQYDLNRNFPDAFEYN----------NV  148 (426)
T ss_dssp             HHHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHCSSCCSSCCSCSSCTTSCCTTSCSCCSSSCC----------CC
T ss_pred             HHHHHHhh-cCCHHHHHHhcCcEEEEEEeeccchhheeeccCcccCCCCCCCcCCCCCCCCCCCCCcC----------Cc
Confidence            99999998 77999999999999999999999999999999987667788999999999999999532          68


Q ss_pred             CCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccc
Q psy8322         182 SIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEV  261 (651)
Q Consensus       182 ~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (651)
                      ++|||+++++++++++++++++|+|+++++++|||++++...                                      
T Consensus       149 ~sepEt~al~~~~~~~~~~~~idlHs~~~~~~~Py~~~~~~~--------------------------------------  190 (426)
T 1uwy_A          149 SRQPETVAVMKWLKTETFVLSANLHGGALVASYPFDNGVQAT--------------------------------------  190 (426)
T ss_dssp             CCCHHHHHHHHHHHHSCEEECCEEECSEEEEEESCSSCCGGG--------------------------------------
T ss_pred             cccHHHHHHHHHHhccCeEEEEEEcCCCeEEEccCCCCcccc--------------------------------------
Confidence            999999999999999999999999999999999999963210                                      


Q ss_pred             hhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHH
Q psy8322         262 QAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEY  341 (651)
Q Consensus       262 g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~  341 (651)
                                         +.  ...|                                                     
T Consensus       191 -------------------~~--~~~~-----------------------------------------------------  196 (426)
T 1uwy_A          191 -------------------GA--LYSR-----------------------------------------------------  196 (426)
T ss_dssp             -------------------TG--GGTC-----------------------------------------------------
T ss_pred             -------------------cc--cccc-----------------------------------------------------
Confidence                               00  0001                                                     


Q ss_pred             HHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHH
Q psy8322         342 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLAST  421 (651)
Q Consensus       342 l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~  421 (651)
                                                                                       ..+|+.+.|+.|+..
T Consensus       197 -----------------------------------------------------------------~~~~d~~~~~~la~~  211 (426)
T 1uwy_A          197 -----------------------------------------------------------------SLTPDDDVFQYLAHT  211 (426)
T ss_dssp             -----------------------------------------------------------------CCCTTHHHHHHHHHH
T ss_pred             -----------------------------------------------------------------CCCCCHHHHHHHHHH
Confidence                                                                             125788899999999


Q ss_pred             hhccCCCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHH
Q psy8322         422 YARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALIS  501 (651)
Q Consensus       422 ~a~~~~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~  501 (651)
                      ++..+..|++...|...  ..|.+|++++..||+++|+++||+|..++|++||+||+|++|||+++|..+|++|+++++.
T Consensus       212 ~~~~~~~~~~~~~c~~~--~~y~~g~~~~~~~Y~~~G~~~D~~y~~~~~~~~T~EL~~~~~pp~~~i~~~~~~n~~all~  289 (426)
T 1uwy_A          212 YASRNPNMKKGDECKNK--MNFPNGVTNGYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPREEKLPSFWNNNKASLIE  289 (426)
T ss_dssp             HHHTCTTTTTSSCCSSS--CCCSTTEEESTTTCCCSSCHHHHHHHTSCCBCCEEEEESSSSCCGGGHHHHHHTTHHHHHH
T ss_pred             HHHhhHhhcCCCccCcc--ccccCCccccceeecCCCchHHhhhhccCceEEEEEecCCCCCChHHhhHHHHHhHHHhhh
Confidence            99999999887778752  3567899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhccceeEEEEcCCCCcccceEEEEeeeeee--eeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCC----
Q psy8322         502 WLQQVHRGVKGLVLDETGSRLANVSISLAYKNVS--FMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPEST----  575 (651)
Q Consensus       502 ~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~--~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~----  575 (651)
                      ++.+++.+|+|+|+|++|+||++|+|.+++.+++  ++||.+|.|.+.+++|.|+|+|+++||+++++.|.+..+.    
T Consensus       290 ~l~qv~~~I~G~V~D~~g~pi~gA~V~v~g~~~~~~~~Td~~G~y~~~l~~G~Y~l~vs~~Gy~~~~~~v~v~~~~~~~~  369 (426)
T 1uwy_A          290 YIKQVHLGVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHDPHITKVIIPEKSQNFS  369 (426)
T ss_dssp             HHGGGGCSEEEEEECTTSCBCCSCEEEETTCCCSSCCBCCTTCEEEECCCSEEEEEEEECSSSCCEEEEEEECSSCSSSS
T ss_pred             hhccccceeEEEEECCCCCccCceEEEEEeccccceeEeCCCCEEEeccCCeeEEEEEEEcCcccEEEEEEEeCCCcccc
Confidence            9999999999999999999999999999998888  9999999998789999999999999999999888887665    


Q ss_pred             ceEEEEEEeeeeeeeEEEEEe
Q psy8322         576 SPVVGAVLESLLEFNITMTSI  596 (651)
Q Consensus       576 ~~~~~~~L~~~~~~~~~v~~~  596 (651)
                      ...++|.|++...++.+|+..
T Consensus       370 ~~~~~~~L~~~~~~l~evv~~  390 (426)
T 1uwy_A          370 ALKKDILLPFQGQLDSIPVSN  390 (426)
T ss_dssp             CEECCEECSSCC---------
T ss_pred             ceEEEEEEecCCccccceeec
Confidence            557899999876555555443

>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}

Probab=100.00  E-value=1.3e-71  Score=610.96  Aligned_cols=389  Identities=40%  Similarity=0.701  Sum_probs=331.4

Q ss_pred             CCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHHHHH
Q psy8322          26 GNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEH  104 (651)
Q Consensus        26 ~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~  104 (651)
                      .+||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++ .+..+||.|+|+||+||+||+|++++++|+++
T Consensus         4 ~~y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~~~~~~kp~v~i~~giHg~E~~g~~~~~~l~~~   83 (439)
T 2nsm_A            4 FRHHRYDDLVRTLYKVQNECPGITRVYSIGRSVEGRHLYVLEFSDHPGIHEPLEPEVKYVGNMHGNEALGRELMLQLSEF   83 (439)
T ss_dssp             SSCCCHHHHHHHHHHHHHHSGGGEEEEEEEECTTSCEEEEEEECSSTTSCCTTCCEEEEEECSSTTCCHHHHHHHHHHHH
T ss_pred             CCcCCHHHHHHHHHHHHHHCCCceEEEecCccCCCCEEEEEEECCCCCccccCCceEEEecccCCCcHHHHHHHHHHHHH
Confidence            38999999999999999999999999999999999999999999865 34567999999999999999999999999999


Q ss_pred             HHHHhccCChhHHHhhcCceEEEEeccCccccccccc---ccccCCCCCCCccCcCCCCCCCc----ccCC---CC--CC
Q psy8322         105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE---GNCRSGRGRNNINNHDLNRQFPD----YFRH---NR--SN  172 (651)
Q Consensus       105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~---~~r~~~~~r~n~~GvDLNRnf~~----~w~~---~~--s~  172 (651)
                      |+.+|..+|++++.||++++|+|||++|||||+++++   .+|.|..+|.||.|||||||||+    .|..   .+  +.
T Consensus        84 L~~~y~~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~~~~wr~~R~n~~GvDLNRnf~~~~~~~w~~~~~g~~~~~  163 (439)
T 2nsm_A           84 LCEEFRNRNQRIVQLIQDTRIHILPSMNPDGYEVAAAQGPNKPGYLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHH  163 (439)
T ss_dssp             HHHHHHHTCHHHHHHHHHCEEEEESCSCHHHHHHHHHTTTTCCTTTTTCSCTTSCCGGGCSCCCHHHHHHHHHHCCCCSC
T ss_pred             HHHhhccCCHHHHHHHhCceEEEEeCcCCChHHhhcccCCccCcccCCccCCCCCcccccCcccchhhccccccCCcccC
Confidence            9998844589999999999999999999999999754   35556667889999999999999    4532   22  34


Q ss_pred             CCC---CCCCCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCc
Q psy8322         173 IPT---LVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPT  249 (651)
Q Consensus       173 ~p~---y~G~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  249 (651)
                      +||   |+|+   +|||++||++|+.++++.+++|+|+++++++|||++++....                         
T Consensus       164 ~p~~~~y~g~---sepEt~al~~~~~~~~~~~~idlHs~~~~~~yPy~~~~~~~~-------------------------  215 (439)
T 2nsm_A          164 LPLPDNWKSQ---VEPETRAVIRWMHSFNFVLSANLHGGAVVANYPYDKSFEHRV-------------------------  215 (439)
T ss_dssp             CCCCTTHHHH---SCHHHHHHHHHHHHSCEEEEEEEECSEEEEEESCCSCCC----------------------------
T ss_pred             CCCccccCCC---CCHHHHHHHHHHHhCCcEEEEEcccCCEEEEecCCCCccccc-------------------------
Confidence            688   6675   999999999999999999999999999999999999642210                         


Q ss_pred             cccccccccccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCc
Q psy8322         250 LVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEP  329 (651)
Q Consensus       250 ~~~~~~~~~~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~  329 (651)
                                                    .+.    .+                                         
T Consensus       216 ------------------------------~~~----~~-----------------------------------------  220 (439)
T 2nsm_A          216 ------------------------------RGV----RR-----------------------------------------  220 (439)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ------------------------------ccc----cc-----------------------------------------
Confidence                                          000    00                                         


Q ss_pred             chHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCC
Q psy8322         330 IGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALT  409 (651)
Q Consensus       330 ~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~  409 (651)
                                                                                                .....+
T Consensus       221 --------------------------------------------------------------------------~~y~~~  226 (439)
T 2nsm_A          221 --------------------------------------------------------------------------TASTPT  226 (439)
T ss_dssp             ---------------------------------------------------------------------------CCCCC
T ss_pred             --------------------------------------------------------------------------cccCCC
Confidence                                                                                      001236


Q ss_pred             CChHHHHHHHHHhhccCCCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcc
Q psy8322         410 PDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIP  489 (651)
Q Consensus       410 ~~~~~f~~l~~~~a~~~~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~  489 (651)
                      |+.+.|+.|+..++..+..|++...|..    .+.+|+++++.||+++|+++||+|..++|++||+||+|++|||+++|.
T Consensus       227 ~d~~~~~~la~~~a~a~~~~~~~~~c~~----~~~g~~~~~~~~Y~~~G~~~D~~y~~~~~~~~T~EL~~~~~pp~~~i~  302 (439)
T 2nsm_A          227 PDDKLFQKLAKVYSYAHGWMFQGWNCGD----YFPDGITNGASWYSLSKGMQDFNYLHTNCFEITLELSCDKFPPEEELQ  302 (439)
T ss_dssp             TTHHHHHHHHHHHHHHSSSGGGCEETTE----ECGGGEEEHHHHCCCCSCHHHHHHHHSSCEEEEEEEESSSSCCGGGHH
T ss_pred             CCHHHHHHHHHHHHHhhhhhcCCCcCcc----cccCCccccceeecCCCChhhhhhhhcCceEEEEEeccCCCCCHHHHH
Confidence            8899999999999999999886534743    567889999999999999999999999999999999999999999999


Q ss_pred             hhhhhchHHHHHHHHhhccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEE
Q psy8322         490 IHWRSNQNALISWLQQVHRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRI  569 (651)
Q Consensus       490 ~~w~~nr~all~~~aqa~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v  569 (651)
                      .+|++|+++++.++.+++.+|+|+|+|++|+||++|+|.|.+..++++||.+|.|++.|++|.|+|+|+++||++.++.|
T Consensus       303 ~~w~~n~~all~~leqv~~~i~G~V~D~~g~pi~gA~V~v~~~~~~~~Td~~G~y~~~l~~G~Y~l~vs~~Gy~~~~~~v  382 (439)
T 2nsm_A          303 REWLGNKEALIQFLEQVHQGIKGMVLDQNYNNLANAVISVSGINHDVTSGDHGDYFRLLLPGIYTVSATAPGYDPETVTV  382 (439)
T ss_dssp             HHHHHHHHHHHHHHHTTSCSEEEEEECTTSCBCTTCEEEETTEEEEEECCTTSEEEECCCSEEEEEEEECTTEECEEEEE
T ss_pred             HHHHhhHHHHHHHhhccccceEEEEEcCCCCCccceEEEEEcccceeEECCCCeEEEccCCeeEEEEEEecCceeEEEEE
Confidence            99999999999999999999999999999999999999999988999999999997789999999999999999999988


Q ss_pred             Ee-eCCCceEEEEEEeeeeeeeEEEEEe
Q psy8322         570 KI-PESTSPVVGAVLESLLEFNITMTSI  596 (651)
Q Consensus       570 ~v-~~~~~~~~~~~L~~~~~~~~~v~~~  596 (651)
                      .| ..+.... +|.|++...++.+|++.
T Consensus       383 ~v~~~~~~~~-~~~L~~~~~~L~eVvV~  409 (439)
T 2nsm_A          383 TVGPAEPTLV-NFHLKRSIPQVSPVRRA  409 (439)
T ss_dssp             EECSSSCEEC-CEECEEC----------
T ss_pred             EEecCCcceE-eEEEccCCCccccEEEe
Confidence            88 4455444 89998876555555443

>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A*

Probab=100.00  E-value=1e-57  Score=490.95  Aligned_cols=202  Identities=24%  Similarity=0.313  Sum_probs=186.9

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHH
Q psy8322          19 PAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREII   98 (651)
Q Consensus        19 ~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~   98 (651)
                      ....++|++||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++  ...||.|++.||+||+||+|++++
T Consensus        92 ~~~~~~~~~Y~t~~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~i~~l~is~~~--~~~kp~v~i~~giHg~E~ig~~~~  169 (401)
T 3dgv_A           92 RASSSYYEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKE--QRAKNAMWIDCGIHAREWISPAFC  169 (401)
T ss_dssp             TTCTTGGGSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEECCCC--SSCCEEEEEEECSSTTCTHHHHHH
T ss_pred             cccCCCccccCCHHHHHHHHHHHHHHCCCcEEEEEcccCCCCCEEEEEEecCCC--CCCCcEEEEeCCCCCCCCccHHHH
Confidence            456789999999999999999999999999999999999999999999999864  246899999999999999999999


Q ss_pred             HHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCc-ccCCCC-C
Q psy8322          99 LRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPD-YFRHNR-S  171 (651)
Q Consensus        99 l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~-~w~~~~-s  171 (651)
                      ++|++.|+.+| +.|+.++.+|++++|+|||++|||||+++++++|  ||+|.   +.||+|||||||||+ +|...+ +
T Consensus       170 l~~~~~L~~~y-~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~r~wrknR~~~~~~n~~GvDLNRNf~~~~w~~~g~s  248 (401)
T 3dgv_A          170 LWFVGSVTYYY-GKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKKDRMWRKNRSLHEKNACVGTDLNRNFASKHWCGEGAS  248 (401)
T ss_dssp             HHHHHHHHHHT-TTSHHHHHHHHHEEEEEESCSCHHHHHHHHHTCTTCCSCCCCCTTCSSCCCCGGGCSCCTTTTSTTCB
T ss_pred             HHHHHhhhhhc-cCCHHHHHHHhCCeEEEEEeeccchhhheeccCcceeecccCCCCCCCCCCChhhcCCccccccccCC
Confidence            99999999998 7899999999999999999999999999999999  55553   469999999999999 998766 5


Q ss_pred             CCCC---CCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCCC
Q psy8322         172 NIPT---LVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGES  223 (651)
Q Consensus       172 ~~p~---y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~~  223 (651)
                      .+||   |+|+.|+|||||+||++|++++  ++.+++++|+++++++|||++++..+
T Consensus       249 ~~pc~~~y~G~~p~sepEt~al~~~i~~~~~~~~~~i~lHs~~~~i~yPy~~~~~~~  305 (401)
T 3dgv_A          249 SSSCSEIYCGTYPESEPEVKAVADFLRRNIKHIKAYISMHSYSQKIVFPYSYSRSRS  305 (401)
T ss_dssp             SCTTSTTBCCSSTTCSHHHHHHHHHHHHTTTTEEEEEEEEESSCEEEESCSSSSSCC
T ss_pred             CCCcccccCCCCcCcCHHHHHHHHHHHHhCcCceEEEEEecCCCEEEeCCCCCCCCC
Confidence            6898   9999999999999999999998  68999999999999999999986543

>3v38_A Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A 3prt_A

Probab=100.00  E-value=4.2e-57  Score=474.80  Aligned_cols=195  Identities=29%  Similarity=0.428  Sum_probs=178.3

Q ss_pred             CCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322          27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV  106 (651)
Q Consensus        27 ~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~  106 (651)
                      +||+|+||.++|++|+++||+++++.+||+|+|||+|++|+|+++.....+||.|+|+|+||||||+|++++++|++.|+
T Consensus         8 ~Y~ty~ei~~~l~~L~~~~p~~v~~~~iG~S~eGR~i~~l~is~~~~~~~~kp~v~i~~giHa~E~i~~~~~~~~~~~L~   87 (326)
T 3v38_A            8 GYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFT   87 (326)
T ss_dssp             TSCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECTTTTSCCCCCEEEEEECSSTTCTHHHHHHHHHHHHHH
T ss_pred             CcCCHHHHHHHHHHHHHHCCCCEEEEEeeEccCCCEEEEEEEecCCCCCCCCCEEEEEcccCCCChhHHHHHHHHHHHHH
Confidence            89999999999999999999999999999999999999999998654345799999999999999999999999999999


Q ss_pred             HHhccCChhHHHhhcCceEEEEeccCcccccccccc--cc--cCCCCC---CCccCcCCCCCCCcccCCC--CCCCCC--
Q psy8322         107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG--NC--RSGRGR---NNINNHDLNRQFPDYFRHN--RSNIPT--  175 (651)
Q Consensus       107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~--~r--~~~~~r---~n~~GvDLNRnf~~~w~~~--~s~~p~--  175 (651)
                      .+| +.|+.++.||++++|+|||++|||||+++++.  +|  ||+|..   .+|.|||||||||++|...  .|.+||  
T Consensus        88 ~~y-~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~r~WRknR~~~~~~~~~GvDLNRNf~~~w~~~~g~s~~pc~~  166 (326)
T 3v38_A           88 QNY-NLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSE  166 (326)
T ss_dssp             HTT-TTSHHHHHHHHHCEEEEECCSCHHHHHHHHTTSSCCCCCSCSCCCTTCSCCCCCGGGCSSTTTTCSSSSBSCTTST
T ss_pred             HHh-ccCHHHHHHHhCceEEEEeeecCChhhccccCCccccccccCCCCCCCCcCccccccCCCcccccCCCCCCCCCcc
Confidence            988 78999999999999999999999999999875  36  566543   4699999999999999753  367898  


Q ss_pred             -CCCCCCCCcHHHHHHHHHHHhC------CcEEEEEEecCceeeeeccccccCC
Q psy8322         176 -LVSTSQSIDPEVQAVIDWMNSV------PFVMSLQLHGGNVVASYPYDSFYGE  222 (651)
Q Consensus       176 -y~G~~~~sepEt~al~~~~~~~------~~~~~i~~H~~~~~~~~P~~~~~~~  222 (651)
                       |+|+.|||||||+||++|++++      ++.++|++|+++++++|||++++..
T Consensus       167 ~Y~G~~p~sEpEt~av~~~i~~~~~~~~~~~~~~i~~Hs~~~~il~Pyg~~~~~  220 (326)
T 3v38_A          167 TYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTD  220 (326)
T ss_dssp             TBCCSSTTCSHHHHHHHHHHHHTEETTEECEEEEEEEEESSSEEEESCSSCSCS
T ss_pred             ccCCCCCCccHHHHHHHHHHHhhccccccCeEEEEEecCCCCEEEecCCCCCCC
Confidence             9999999999999999999986      7999999999999999999998543

>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A

Probab=100.00  E-value=3.3e-54  Score=454.75  Aligned_cols=195  Identities=29%  Similarity=0.422  Sum_probs=176.8

Q ss_pred             CCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHH
Q psy8322          25 FGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEH  104 (651)
Q Consensus        25 ~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~  104 (651)
                      +.+||+|+||.++|++|+++||+++++.+||+|+|||+|++|+|++++.....||.|+|+|++||+||+|++++++|++.
T Consensus         6 ~~~y~~y~ei~~~l~~l~~~~p~~~~~~~iG~S~eGR~i~~l~i~~~~~~~~~kp~v~i~~giHg~E~~g~~~~~~l~~~   85 (323)
T 3prt_A            6 DSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDL   85 (323)
T ss_dssp             GTTSCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECTTTTSCCSSCEEEEEECSSTTCTHHHHHHHHHHHH
T ss_pred             cCCCCCHHHHHHHHHHHHHHCCCcEEEEeceeccCCCceEEEEecCCCCCCCCCceEEEecccCcCccccHHHHHHHHHH
Confidence            45899999999999999999999999999999999999999999987543457999999999999999999999999999


Q ss_pred             HHHHhccCChhHHHhhcCceEEEEeccCcccccccccc--cc--cCCCC---CCCccCcCCCCCCCcccCC--CCCCCCC
Q psy8322         105 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG--NC--RSGRG---RNNINNHDLNRQFPDYFRH--NRSNIPT  175 (651)
Q Consensus       105 L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~--~r--~~~~~---r~n~~GvDLNRnf~~~w~~--~~s~~p~  175 (651)
                      |+.+| +.|+.++.||++++|+|||++|||||+++++.  +|  ||+|.   ..+|.|||||||||++|..  +.+.+||
T Consensus        86 L~~~y-~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~r~wR~nr~~~~~~~~~GvDLNRnf~~~w~~~~g~s~~p~  164 (323)
T 3prt_A           86 FTQNY-NLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPS  164 (323)
T ss_dssp             HHHTT-TTSHHHHHHHTTCEEEEECCSCHHHHHHHHTTSSCCCCCSCSCCCTTCSCCCCCGGGCSSTTTTSSSSSBSCTT
T ss_pred             HHHHh-cCCHHHHHHHhCCeEEEEeeecCchheeeeccCCccccccCCCCCCCCcccccccccCCCcccCCCCCCCCCCC
Confidence            99988 77999999999999999999999999998764  34  44443   2358999999999999987  3367888


Q ss_pred             ---CCCCCCCCcHHHHHHHHHHHhC------CcEEEEEEecCceeeeecccccc
Q psy8322         176 ---LVSTSQSIDPEVQAVIDWMNSV------PFVMSLQLHGGNVVASYPYDSFY  220 (651)
Q Consensus       176 ---y~G~~~~sepEt~al~~~~~~~------~~~~~i~~H~~~~~~~~P~~~~~  220 (651)
                         |+|+.|+|||||+||++|++++      ++.+++|+|+++++++|||++++
T Consensus       165 ~~~y~G~~~~sepEt~a~~~~~~~~~~~~~~~~~~~idlHs~~~~~~ypy~~~~  218 (323)
T 3prt_A          165 SETYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYSYTY  218 (323)
T ss_dssp             STTBCCSSTTCSHHHHHHHHHHHHTEETTEECEEEEEEEEESSSEEEESCCSCS
T ss_pred             ccccCCCCCCCcHHHHHHHHHHHHhhhccccCeEEEEEccCCCceEEecCCCCC
Confidence               9999999999999999999998      79999999999999999999964

>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ...

Probab=100.00  E-value=2.1e-53  Score=445.92  Aligned_cols=198  Identities=21%  Similarity=0.326  Sum_probs=182.8

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHH
Q psy8322          21 AGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILR  100 (651)
Q Consensus        21 ~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~  100 (651)
                      ..++|+.||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++   ..+||.|+|+||+||+||+|++++++
T Consensus         2 ~~~~~~~y~~~~e~~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~---~~~~p~v~i~agiHg~E~~g~~~~~~   78 (306)
T 1z5r_A            2 TGHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKP---GPNKPAIFMDCGFHAREWISHAFCQW   78 (306)
T ss_dssp             -CCCTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEESCC---CSSCCEEEEECCSSTTCHHHHHHHHH
T ss_pred             CCCCcccCCCHHHHHHHHHHHHHHCCCceEEEeccccCCCCeeEEEEeCCC---CCCCceEEEEecccccchhhHHHHHH
Confidence            468999999999999999999999999999999999999999999999975   25689999999999999999999999


Q ss_pred             HHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CCCC
Q psy8322         101 LLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SNIP  174 (651)
Q Consensus       101 ~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~p  174 (651)
                      |++.|+.+| +.|++++.+|++++|+|||++|||||+++++++|  ||+|.   |.||.|||||||||..|...+ +.+|
T Consensus        79 l~~~L~~~~-~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wrk~r~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p  157 (306)
T 1z5r_A           79 FVREAVLTY-GYESHMTEFLNKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDP  157 (306)
T ss_dssp             HHHHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTSSCBCCCGGGCSSSSTTSSSCBSCT
T ss_pred             HHHHHHHhh-ccCHHHHHHHhcCcEEEEeeeCCchhhheeccccccccCCCCCCCCCccCCccCCCCCCCCCCCCCCCCC
Confidence            999999998 7799999999999999999999999999999888  45543   368999999999999999766 5688


Q ss_pred             C---CCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCC
Q psy8322         175 T---LVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGE  222 (651)
Q Consensus       175 ~---y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~  222 (651)
                      |   |+|+.|++|||++++++++.++  ++.+++|+|+++++++|||++++..
T Consensus       158 ~~~~y~G~~~~sepEt~a~~~~~~~~~~~~~~~idlHs~~~~~~~Py~~~~~~  210 (306)
T 1z5r_A          158 CDETYCGSAAESEKETKALADFIRNNLSSIKAYLTIHSYSQMILYPYSYDYKL  210 (306)
T ss_dssp             TSTTBCCSSTTCSHHHHHHHHHHHHTTTTEEEEEEEEESSSEEEESCSSSSCC
T ss_pred             CccccCCCCCCCcHHHHHHHHHHHHhccCeEEEEEEeCCCCeEEeCCCCCCCC
Confidence            8   9999999999999999999999  8999999999999999999986433

>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1

Probab=100.00  E-value=2.8e-53  Score=444.08  Aligned_cols=195  Identities=25%  Similarity=0.370  Sum_probs=181.2

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLL  102 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~  102 (651)
                      ++|+.||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++    ..||.|+|+||+||+||+|++++++|+
T Consensus         1 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~----~~~p~v~i~agiHg~E~~g~~~~~~l~   76 (303)
T 1dtd_A            1 FNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTG----GDKPAIWLDAGIHAREWVTQATALWTA   76 (303)
T ss_dssp             CCTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEECCS----SSCCEEEEECCSSTTCHHHHHHHHHHH
T ss_pred             CCcCCCCCHHHHHHHHHHHHHHCCCceEEEeCcccCCCCeEEEEEEeCC----CCCcEEEEEcccccCccccHHHHHHHH
Confidence            5799999999999999999999999999999999999999999999975    468999999999999999999999999


Q ss_pred             HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC----CCCccCcCCCCCCCcccCCCC-CCCCC
Q psy8322         103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG----RNNINNHDLNRQFPDYFRHNR-SNIPT  175 (651)
Q Consensus       103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~----r~n~~GvDLNRnf~~~w~~~~-s~~p~  175 (651)
                      +.|+.+| +.|++++.+|++++|+|||++||||++++++++|  ||+|.    +.||.|||||||||..|...+ +.+||
T Consensus        77 ~~L~~~y-~~~~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wr~~r~~~~~~~~~~GvDLNRnfp~~w~~~g~s~~p~  155 (303)
T 1dtd_A           77 NKIVSDY-GKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKVSAGSLCVGVDPNRNWDAGFGGPGASSNPC  155 (303)
T ss_dssp             HHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTTCSCBCCCGGGCSSSSTTCTTCBSCTT
T ss_pred             HHHHHHh-cCCHHHHHHHhCCeEEEEecccCccceeeeccccccccCCCCCCCCCCCcCcccCCCCCCcCccCCCCCCCC
Confidence            9999998 7899999999999999999999999999999988  45544    358999999999999999766 56788


Q ss_pred             ---CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCC
Q psy8322         176 ---LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGE  222 (651)
Q Consensus       176 ---y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~  222 (651)
                         |+|+.|+||||++++++++.++ ++.+++|+|+++++++|||++++..
T Consensus       156 ~~~y~G~~~~sepEt~a~~~~~~~~~~~~~~idlHs~~~~~~~Py~~~~~~  206 (303)
T 1dtd_A          156 SDSYHGPSANSEVEVKSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTK  206 (303)
T ss_dssp             STTBCCSSTTCSHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSCCSC
T ss_pred             ccccCCCCCCCcHHHHHHHHHHHhCCCeEEEEEeeCCCCeEEeCCCCCCCC
Confidence               9999999999999999999999 7999999999999999999996543

>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A

Probab=100.00  E-value=9.2e-53  Score=455.43  Aligned_cols=199  Identities=20%  Similarity=0.296  Sum_probs=184.5

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHH
Q psy8322          20 AAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIIL   99 (651)
Q Consensus        20 ~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l   99 (651)
                      ...++|+.||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++   ..+||.|+|+||+||+||+|+++++
T Consensus        96 ~~~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~---~~~kp~v~i~agiHg~E~~g~~~~~  172 (402)
T 1kwm_A           96 ATGHSYEKYNKWETIEAWTQQVATENPALISRSVIGTTFEGRAIYLLKVGKA---GQNKPAIFMDCGFHAREWISPAFCQ  172 (402)
T ss_dssp             SSSCCTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEESCC---CTTCCEEEEECCSSTTCTHHHHHHH
T ss_pred             cCCCCcCCCCCHHHHHHHHHHHHHHCCCcEEEEEcccCCCCCceEEEEeCCC---CCCCceEEEecCCCCCccchHHHHH
Confidence            4568999999999999999999999999999999999999999999999974   2568999999999999999999999


Q ss_pred             HHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCC---CCccCcCCCCCCCcccCCCC-CCC
Q psy8322         100 RLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGR---NNINNHDLNRQFPDYFRHNR-SNI  173 (651)
Q Consensus       100 ~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r---~n~~GvDLNRnf~~~w~~~~-s~~  173 (651)
                      +|++.|+.+| +.|+.++.||++++|+|||++|||||+++++++|  ||+|..   .||.|||||||||++|...+ +.+
T Consensus       173 ~li~~L~~~y-~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~~~~GvDLNRnf~~~w~~~g~s~~  251 (402)
T 1kwm_A          173 WFVREAVRTY-GREIQVTELLNKLDFYVLPVLNIDGYIYTWTKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGASRN  251 (402)
T ss_dssp             HHHHHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCSSCCCCCCCGGGCSSSSTTSSSCBSC
T ss_pred             HHHHHHHHHh-cCCHHHHHHHhCCeEEEEeeeCCcchhhcccccceeeccCCCCCCCCCcCcccccCCccccCCCCCCCC
Confidence            9999999998 7899999999999999999999999999999998  455442   58999999999999999766 578


Q ss_pred             CC---CCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCC
Q psy8322         174 PT---LVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGE  222 (651)
Q Consensus       174 p~---y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~  222 (651)
                      ||   |+|+.|+||||+++|++++.++  ++.+++|+|+++++++|||++++..
T Consensus       252 pc~~~y~G~~~~sepEt~al~~~~~~~~~~~~~~idlHs~~~~~~~Py~~~~~~  305 (402)
T 1kwm_A          252 PCDETYCGPAAESEKETKALADFIRNKLSSIKAYLTIHSYSQMMIYPYSYAYKL  305 (402)
T ss_dssp             TTSTTBCCSSTTCSHHHHHHHHHHHHTTTTEEEEEEEEESSCEEEESCSSSSCC
T ss_pred             CCccccCCCCCCCcHHHHHHHHHHHhhccCeeEEEEEeCCCCEEEeCCCCCCCC
Confidence            98   9999999999999999999999  7999999999999999999997544

>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A

Probab=100.00  E-value=7.8e-53  Score=442.29  Aligned_cols=199  Identities=23%  Similarity=0.303  Sum_probs=173.2

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHH
Q psy8322          21 AGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILR  100 (651)
Q Consensus        21 ~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~  100 (651)
                      ..++|+.||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++.+  ..+||.|+|+||+||+||+|++++++
T Consensus         2 ~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~--~~~~p~v~i~agiHg~E~~g~~~~~~   79 (309)
T 3d4u_A            2 SSSYYEQYHSLNEIYSWIEVMTERYPDMVEKIHIGSSYEKYPLYVLKVSKKE--QRAKNAMWIDCGIHAREWISPAFCLW   79 (309)
T ss_dssp             --CGGGSCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTCCEEEEEEECCC-------CEEEEECCSSTTCTHHHHHHHH
T ss_pred             CCCCcccCCCHHHHHHHHHHHHHHCCCceEEEeccccCCCCeeEEEEeCCCC--CCCCceEEEEeccCCcchhhHHHHHH
Confidence            4588999999999999999999999999999999999999999999999743  25689999999999999999999999


Q ss_pred             HHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCC---CCccCcCCCCCCCc-ccCCCC-CCC
Q psy8322         101 LLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGR---NNINNHDLNRQFPD-YFRHNR-SNI  173 (651)
Q Consensus       101 ~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r---~n~~GvDLNRnf~~-~w~~~~-s~~  173 (651)
                      |++.|+.+| +.|++++.+|++++|+|||++|||||+++++++|  ||+|..   .+|.|||||||||. .|...+ +.+
T Consensus        80 l~~~L~~~~-~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wr~~R~~~~~~~~~GvDLNRnf~~~~w~~~g~s~~  158 (309)
T 3d4u_A           80 FVGSVTYYY-GKEKMHTNLLKHMDFYIMPVVNVDGYDYTWKKDRMWRKNRSLHEKNACVGTDLNRNFASKHWCGEGASSS  158 (309)
T ss_dssp             HHHHHHHST-TC-----CCSTTCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCTTCSSCCCCGGGCSCCTTTTSTTSBSC
T ss_pred             HHHHHHHhh-ccCHHHHHHHhcCeEEEEeeeccchhheeecccceeecCCCCCCCCCCcCccccCCCChhhcCCCCCCCC
Confidence            999999988 6789999999999999999999999999998888  444432   47999999999999 998765 567


Q ss_pred             CC---CCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCC
Q psy8322         174 PT---LVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGE  222 (651)
Q Consensus       174 p~---y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~  222 (651)
                      ||   |+|+.|++|||+++|++++.++  ++.+++|+|+++++++|||++++..
T Consensus       159 p~~~~y~G~~~~sepEt~a~~~~~~~~~~~~~~~idlH~~~~~~~~Py~~~~~~  212 (309)
T 3d4u_A          159 SCSEIYCGTYPESEPEVKAVADFLRRNIKHIKAYISMHSYSQKIVFPYSYSRSR  212 (309)
T ss_dssp             TTSTTBCCSSTTCSHHHHHHHHHHHHTTTTEEEEEEEEESSSEEEESCSSCSSC
T ss_pred             CCccccCCCCCCCcHHHHHHHHHHHhcccceEEEEEEeCCCcEEEeCCCCCCCC
Confidence            88   9999999999999999999999  6899999999999999999996543

>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1

Probab=100.00  E-value=1.2e-52  Score=441.33  Aligned_cols=195  Identities=24%  Similarity=0.334  Sum_probs=177.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLL  102 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~  102 (651)
                      |+|+.||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++..+..+||.|+|+|++||+||+|++++++|+
T Consensus         1 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~~~~~~~p~v~i~agiHg~E~~g~~~~~~l~   80 (312)
T 2c1c_A            1 LPYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIFIDGGIHAREWISPPSVTWAI   80 (312)
T ss_dssp             CCCSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECTTTTCCTTSCEEEEEECSSTTCTTHHHHHHHHH
T ss_pred             CCCCCCCCHHHHHHHHHHHHHHCCCceEEEecccCCCCCeEEEEEecCCCccCCCCCEEEEEeccCCCccccHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999865444679999999999999999999999999


Q ss_pred             HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCCC------CCccCcCCCCCCCcccCCCC-CCC
Q psy8322         103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRGR------NNINNHDLNRQFPDYFRHNR-SNI  173 (651)
Q Consensus       103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~r------~n~~GvDLNRnf~~~w~~~~-s~~  173 (651)
                      +.|+.++ . +   ..+|++++|+|||++|||||+++++++|  ||+|..      .+|.|||||||||+.|...+ +.+
T Consensus        81 ~~L~~~~-~-~---~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wr~~R~~~~~~~~~~~~GvDLNRnf~~~w~~~g~s~~  155 (312)
T 2c1c_A           81 HKLVEDV-T-E---NDLLEKFDWILLPVVNPDGYKYTFTNERFWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNS  155 (312)
T ss_dssp             HHHHTSC-C-C---THHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCSSGGGGTSCCCCGGGCSSSSTTSSSCBSC
T ss_pred             HHHHHhc-c-c---HHHHhcCcEEEEecccCccceeeecccccccccCCCCCCCccccccCCCcccCCCcCCCCCCCCCC
Confidence            9999876 3 3   4889999999999999999999998888  444432      57999999999999999866 468


Q ss_pred             CC---CCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCC
Q psy8322         174 PT---LVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGE  222 (651)
Q Consensus       174 p~---y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~  222 (651)
                      ||   |+|+.|+||||+++|++++.++  ++.+++|+|+++++++|||++++..
T Consensus       156 p~~~~y~G~~~~sepEt~al~~~~~~~~~~~~~~idlHs~~~~~~~P~~~~~~~  209 (312)
T 2c1c_A          156 PCSDIYAGTSAFSEVETRVVRDILHEHLARMALYLTMHSFGSMILYPWGHDGSL  209 (312)
T ss_dssp             TTSTTBCCSSTTCSHHHHHHHHHHHHHGGGEEEEEEEEESSSEEEESCTTTCCC
T ss_pred             CCccccCCCCCCCCHHHHHHHHHHHhccCCeeEEEEEecCCCeEEeCCCCCCCC
Confidence            88   9999999999999999999998  8999999999999999999996443

>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1

Probab=100.00  E-value=7.3e-51  Score=443.89  Aligned_cols=197  Identities=23%  Similarity=0.307  Sum_probs=179.1

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHH
Q psy8322          20 AAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIIL   99 (651)
Q Consensus        20 ~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l   99 (651)
                      ...++|+.||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++..+..+||.|+|+||+|||||+|+++++
T Consensus       113 ~~~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~  192 (433)
T 1jqg_A          113 RSRLSFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDASKPVVMMQSLLHCREWVTLPATL  192 (433)
T ss_dssp             SSCCCSSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEECTTTTCCTTSCEEEEEECSSTTCTTHHHHHH
T ss_pred             ccccCcCCcCCHHHHHHHHHHHHHHCCCcEEEEeceECCCCCeEEEEEecCCCCCCCCCCEEEEecCcCCCchhhHHHHH
Confidence            56799999999999999999999999999999999999999999999999764334679999999999999999999999


Q ss_pred             HHHHHHHHHhccCChhHHHhhcCceEEEEeccCccccccccccccc--CCCCC-----CCccCcCCCCCCCcccCCCCCC
Q psy8322         100 RLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR--SGRGR-----NNINNHDLNRQFPDYFRHNRSN  172 (651)
Q Consensus       100 ~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~--~~~~r-----~n~~GvDLNRnf~~~w~~~~s~  172 (651)
                      ++++.|+.++ . +   ..||++++|+|||++|||||+++++++|.  |+|..     .+|.|+|||||||++|...++.
T Consensus       193 ~li~~L~~~~-~-~---~~ll~~~~i~ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~~~~~~GvDLNRnf~~~w~~~Gs~  267 (433)
T 1jqg_A          193 YAIHKLVIDV-T-E---SDLINNIDWIILPVANPDGYVHTFGGDRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSS  267 (433)
T ss_dssp             HHHHHHHTSC-C-C---THHHHSCEEEEESCSCHHHHHHHHSSCTTCCSCCCCSSSGGGSSCCCCGGGCSSTTTTSSSBC
T ss_pred             HHHHHHHhcc-c-c---HHHHhcceEEEEeeecCccchhcccCccccccCCCCCCCCCCCCcCcccccCCccccCCCCCC
Confidence            9999999876 3 3   48899999999999999999999999984  44432     2699999999999999976677


Q ss_pred             CCC---CCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCC
Q psy8322         173 IPT---LVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGE  222 (651)
Q Consensus       173 ~p~---y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~  222 (651)
                      +||   |+|+.|+||||++++++++.++  ++.+++|+|+++++++|||+ ++..
T Consensus       268 ~pc~e~y~G~~~~sepEt~al~~~~~~~~~~~~~~idlHs~~~~~~~Py~-~~~~  321 (433)
T 1jqg_A          268 SVCSDTFHGRSAFSEPESSVIRDIIAEHRNRMALYLDIHSFGSMILYGYG-NGVL  321 (433)
T ss_dssp             CTTSTTBCCSSTTCSHHHHHHHHHHHHTTTTEEEEEEEEESSSEEEESCT-TSCC
T ss_pred             CCcccccCCCCCCccHHHHHHHHHHHHhcCCeEEEEEEcCCCCEEEeCCC-CCCC
Confidence            898   9999999999999999999999  89999999999999999999 6543

>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A

Probab=100.00  E-value=7.7e-51  Score=439.88  Aligned_cols=262  Identities=22%  Similarity=0.327  Sum_probs=224.5

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHH
Q psy8322          20 AAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIIL   99 (651)
Q Consensus        20 ~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l   99 (651)
                      ...++|..||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++    +||.|+|+||+||+||+|+++++
T Consensus        97 ~~~~~~~~y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~----~kp~v~i~agiHg~E~~g~~~~~  172 (401)
T 1aye_A           97 SGNFNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGG----DKPAIWLDAGIHAREWVTQATAL  172 (401)
T ss_dssp             TSCCCSSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECSSS----SCCEEEEEECSSTTCHHHHHHHH
T ss_pred             cccCCCCCCCCHHHHHHHHHHHHHHCCCcEEEEEcccCCCCCeeEEEEecCCC----CCceEEEecccCCCccccHHHHH
Confidence            46789999999999999999999999999999999999999999999999753    68999999999999999999999


Q ss_pred             HHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CCC
Q psy8322         100 RLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SNI  173 (651)
Q Consensus       100 ~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~  173 (651)
                      +|++.|+.+| +.|+.++.+|++++|+|||++|||||+++++++|  ||+|.   +.||.|||||||||++|...+ +.+
T Consensus       173 ~l~~~L~~~y-~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~n~~GvDLNRnfp~~w~~~g~s~~  251 (401)
T 1aye_A          173 WTANKIVSDY-GKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSN  251 (401)
T ss_dssp             HHHHHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBCC
T ss_pred             HHHHHHHHHh-CCCHHHHHHHhcCeEEEEeeEcCCCceecccccceeccCCCCCCCCcccccccccCCccccccCCCCCC
Confidence            9999999998 7899999999999999999999999999999998  55553   468999999999999999765 578


Q ss_pred             CC---CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc---cc
Q psy8322         174 PT---LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR---SN  246 (651)
Q Consensus       174 p~---y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  246 (651)
                      ||   |+|+.|+|||||+||++++.++ ++.+++|+|+++++++|||++++..+++   ...+.+....+++...   ..
T Consensus       252 pc~~~y~G~~~~sepEt~al~~~~~~~~~~~~~idlHs~~~~~~~Py~~~~~~~~~---~~~~~~la~~~a~al~~~~g~  328 (401)
T 1aye_A          252 PCSDSYHGPSANSEVEVKSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTKLDD---FDELSEVAQKAAQSLRSLHGT  328 (401)
T ss_dssp             TTSTTBCCSSTTCSHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSSCSCCTT---HHHHHHHHHHHHHHHHHHHCC
T ss_pred             CCccccCCCCCCcCHHHHHHHHHHHccCCEEEEEEEcCCCCEEEeCCCCCCCCCCC---HHHHHHHHHHHHHHHHHhcCC
Confidence            98   9999999999999999999999 8999999999999999999998765442   2222222111221111   11


Q ss_pred             CCccccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         247 IPTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       247 ~~~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      .+..++.+..+|+++|++.||+  .++++++|+|+++.   +.|+|.+
T Consensus       329 ~y~~g~~~~~~y~~~G~~~Dw~y~~g~~~s~T~El~~~---g~~gf~l  373 (401)
T 1aye_A          329 KYKVGPICSVIYQASGGSIDWSYDYGIKYSFAFELRDT---GRYGFLL  373 (401)
T ss_dssp             CCEEEEHHHHTCCCSSCHHHHHHHTTCSEEEEEEESCS---SSSTTSC
T ss_pred             CceeCCccceeeecCcCHHHHHhHcCCCEEEEEEeCCC---CCCCCCC
Confidence            2334444567899999999998  57889999999987   6888876

>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ...

Probab=100.00  E-value=2.1e-50  Score=422.92  Aligned_cols=264  Identities=20%  Similarity=0.297  Sum_probs=224.0

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHH
Q psy8322          18 RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREI   97 (651)
Q Consensus        18 ~~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~   97 (651)
                      +....++|+.||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++   ...||.|+|+|++||+||+|+++
T Consensus         2 ~~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~---~~~~p~v~i~agiHg~E~~g~~~   78 (307)
T 1m4l_A            2 RSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTG---GSNRPAIWIDLGIHSREWITQAT   78 (307)
T ss_dssp             CSTTTSCTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECSS---CSSCCEEEEEECSSTTCHHHHHH
T ss_pred             CccCCCCccCCCCHHHHHHHHHHHHHHCCCceEEEeCcccCCCCeEEEEEEECC---CCCCcEEEEEcccccCcccCHHH
Confidence            345679999999999999999999999999999999999999999999999975   25689999999999999999999


Q ss_pred             HHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCC---CCCCccCcCCCCCCCcccCCCC-C
Q psy8322          98 ILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGR---GRNNINNHDLNRQFPDYFRHNR-S  171 (651)
Q Consensus        98 ~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~---~r~n~~GvDLNRnf~~~w~~~~-s  171 (651)
                      +++|++.|+.+| +.|+.++.||++++|+|||++||||++++++++|  ||+|   +|.||.|||||||||+.|...+ +
T Consensus        79 ~~~l~~~L~~~y-~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~r~wrk~r~~~~~~n~~GvDLNRnf~~~w~~~g~s  157 (307)
T 1m4l_A           79 GVWFAKKFTEDY-GQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGAS  157 (307)
T ss_dssp             HHHHHHHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSB
T ss_pred             HHHHHHHHHHHh-cCCHHHHHHHhcceEEEEecccCccceeeecCCcceecCCCCCCCCcccCCCCCCCCCccCcCCCCC
Confidence            999999999998 7799999999999999999999999999998888  4544   2568999999999999999765 5


Q ss_pred             CCCC---CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhH-HHHhh---
Q psy8322         172 NIPT---LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPD-YFRHN---  243 (651)
Q Consensus       172 ~~p~---y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~~---  243 (651)
                      .+||   |+|+.|++|||+++|+++++.. ++.+++|+|+++++++|||++++..+++   ...+ ..+.+ +++..   
T Consensus       158 ~~p~~~~y~G~~~~sepEt~al~~~~~~~~~~~~~idlH~~~~~~~~P~~~~~~~~~~---~~~~-~~la~~~a~a~~~~  233 (307)
T 1m4l_A          158 SSPCSETYHGKYANSEVEVKSIVDFVKDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPD---KTEL-NQVAKSAVAALKSL  233 (307)
T ss_dssp             CCTTSTTBCCSSTTCSHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSCSCCCTT---HHHH-HHHHHHHHHHHHHH
T ss_pred             CCCCccccCCCCCCCcHHHHHHHHHHHhCCCeEEEEEEecCCCEEEeCCCCCCCCCCC---HHHH-HHHHHHHHHHHHHh
Confidence            6888   9999999999999999999776 6999999999999999999998755432   2222 22222 12111   


Q ss_pred             cccCCccccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         244 RSNIPTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       244 ~~~~~~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      ....+..++.+..+|+.+|++.||+  .++++.+|+|+++.   +.|+|.+
T Consensus       234 ~g~~y~~g~~~~~~y~~~G~~~D~~y~~g~~~~~T~El~~~---g~~Gf~l  281 (307)
T 1m4l_A          234 YGTSYKYGSIITTIYQASGGSIDWSYNQGIKYSFTFELRDT---GRYGFLL  281 (307)
T ss_dssp             HCCCCEEEEHHHHSCCCCSCHHHHHHHTTCCEEEEEEESCS---SSSTTSC
T ss_pred             cCCCceECCccccccccCCCHHHHHhhcCCCEEEEEEecCC---CCCCCCC
Confidence            1112334444567899999999998  58899999999986   6788876

>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A*

Probab=100.00  E-value=2.5e-49  Score=415.32  Aligned_cols=263  Identities=22%  Similarity=0.368  Sum_probs=220.2

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHH
Q psy8322          20 AAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIIL   99 (651)
Q Consensus        20 ~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l   99 (651)
                      ...++|+.||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++  ..+||.|+|+||+||+||+|+++++
T Consensus         2 ~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~--~~~~p~v~i~agiHg~E~~g~~~~~   79 (308)
T 2bo9_A            2 SNNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGK--GVRRPAVWLNAGIHSREWISQATAI   79 (308)
T ss_dssp             CSSCCTTSCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTCCEEEEEEECSST--TSCCCEEEEEECSSTTCHHHHHHHH
T ss_pred             CCCCCcccCCCHHHHHHHHHHHHHHCCCcEEEEeccccCCCCeEEEEEecCCC--CCCCceEEEEccccCcchhhHHHHH
Confidence            45689999999999999999999999999999999999999999999999753  3568999999999999999999999


Q ss_pred             HHHHHHHHHhccCChhHHHhhcCceEEEEeccCccccccccccccc--CCCC---CCCccCcCCCCCCCcccCCCC-CCC
Q psy8322         100 RLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR--SGRG---RNNINNHDLNRQFPDYFRHNR-SNI  173 (651)
Q Consensus       100 ~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~--~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~  173 (651)
                      +|++.|+.+| +.|++++.||++++|+|||++|||||+++++++|.  |+|.   +.+|.|||||||||..|...+ +.+
T Consensus        80 ~l~~~L~~~y-~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~r~wr~~r~~~~~~~~~GvDLNRnf~~~w~~~g~s~~  158 (308)
T 2bo9_A           80 WTARKIVSDY-QRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDN  158 (308)
T ss_dssp             HHHHHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSSBCCCGGGCSSSSTTSSSSBSC
T ss_pred             HHHHHHHHhh-cCCHHHHHHHhcCeEEEEecccCccceeeeccccceecCCCCCCCCCccCCcCCCCCccccCCCCCCCC
Confidence            9999999998 78999999999999999999999999999988884  4432   236999999999999998765 568


Q ss_pred             CC---CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhH-HHHh---hcc
Q psy8322         174 PT---LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPD-YFRH---NRS  245 (651)
Q Consensus       174 p~---y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~-~~~~---~~~  245 (651)
                      ||   |+|+.|++|||+++++++++.. ++.+++|+|+++++++|||++++..+++    .+..+.+.+ +++.   ...
T Consensus       159 p~~~~y~G~~~~sepEt~a~~~~~~~~~~~~~~idlHs~~~~~~~P~~~~~~~~~~----~~~~~~la~~~a~a~~~~~g  234 (308)
T 2bo9_A          159 PCSEVYHGPHANSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPD----AEELDKVARLAAKALASVSG  234 (308)
T ss_dssp             TTSTTBCCSSTTCSHHHHHHHHHHHHHCCEEEEEEEEESSSEEEESCSSCSSCCTT----HHHHHHHHHHHHHHHHHHHC
T ss_pred             CCccccCCCCCCCCHHHHHHHHHHHhCCCeEEEEEEecCCcEEEeCCCCCCCCCCC----HHHHHHHHHHHHHHHHHhhC
Confidence            88   9999999999999999999554 4899999999999999999998755432    222222222 1111   111


Q ss_pred             cCCccccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         246 NIPTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       246 ~~~~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      ..+..++.+..+|+.+|++.||+  .+.++.+++|+++.   +.|+|.+
T Consensus       235 ~~y~~g~~~~~~y~~~G~~~D~~~~~~~~~~~T~El~~~---~~~gf~~  280 (308)
T 2bo9_A          235 TEYQVGPTCTTVYPASGSSIDWAYDNGIKFAFTFELRDT---GTYGFLL  280 (308)
T ss_dssp             CCCEEEEHHHHTCCCCSCHHHHHHHTTCCEEEEEEESCS---SSSTTCC
T ss_pred             CCceeCCccCcccccCCCHHHHHhhcCCcEEEEEEecCC---CCCCCCC
Confidence            12333444556899999999999  57889999999987   6788876

>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1

Probab=100.00  E-value=1.8e-49  Score=429.97  Aligned_cols=263  Identities=22%  Similarity=0.382  Sum_probs=221.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHH
Q psy8322          21 AGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILR  100 (651)
Q Consensus        21 ~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~  100 (651)
                      ..++|..||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++  ..+||.|+|+||+||+||+|++++++
T Consensus        99 ~~~~~~~y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~~--~~~kp~v~i~agiHg~E~~g~~~~~~  176 (404)
T 2boa_A           99 NNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGK--GVRRPAVWLNAGIHSREWISQATAIW  176 (404)
T ss_dssp             CCCCSSSCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTCCEEEEEEECSST--TSCCCEEEEEECSSTTCHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCCceEEEEeccCCCCCeeEEEEeccCC--CCCCCeEEEeCCCCCCCccCHHHHHH
Confidence            5689999999999999999999999999999999999999999999999753  35689999999999999999999999


Q ss_pred             HHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CCCC
Q psy8322         101 LLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SNIP  174 (651)
Q Consensus       101 ~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~p  174 (651)
                      |++.|+.+| +.|+.++.||++++|+|||++|||||+++++++|  ||+|.   +.+|.|||||||||.+|...+ +.+|
T Consensus       177 li~~L~~~y-~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p  255 (404)
T 2boa_A          177 TARKIVSDY-QRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNP  255 (404)
T ss_dssp             HHHHHHHST-TTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTSSCBCCCGGGCSSSSTTCTTCBSCT
T ss_pred             HHHHHHHhh-cCCHHHHHHHhCCeEEEEeeecCcchhhcccccceeecCCCCCCCCCCccccccCCCCccccCCCCCCCC
Confidence            999999988 7899999999999999999999999999999998  44443   247999999999999999765 5789


Q ss_pred             C---CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhh---cccC
Q psy8322         175 T---LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHN---RSNI  247 (651)
Q Consensus       175 ~---y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~  247 (651)
                      |   |+|+.|+||||+++|+++++.. ++.+++|+|+++++++|||++++..+++   ...+.+....+++..   ....
T Consensus       256 c~e~y~G~~~~sepEt~al~~~~~~~~~~~~~idlHs~~~~~l~Py~~~~~~~~~---~~~l~~la~~~a~al~~~~g~~  332 (404)
T 2boa_A          256 CSEVYHGPHANSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPD---AEELDKVARLAAKALASVSGTE  332 (404)
T ss_dssp             TSTTBCCSSTTCSHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSCSCCCTT---HHHHHHHHHHHHHHHHHHHCCC
T ss_pred             CccccCCCCCCCCHHHHHHHHHHHcCCCEEEEEEEeCCCCEEEeccCCCCCCCCC---HHHHHHHHHHHHHHHHHhhCCC
Confidence            8   9999999999999999999444 3899999999999999999998765432   222222211121111   1112


Q ss_pred             Cccccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         248 PTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       248 ~~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      +..++.+..+|+++|++.||+  .+.++++|+|+++.   +.|+|.+
T Consensus       333 y~~g~~~~~~y~~~G~~~D~~y~~~~~~s~T~El~~~---g~~Gf~l  376 (404)
T 2boa_A          333 YQVGPTCTTVYPASGSSIDWAYDNGIKFAFTFELRDT---GTYGFLL  376 (404)
T ss_dssp             CEEEEHHHHSCCCCSCHHHHHHHTTCSEEEEEEESCS---SSSTTSC
T ss_pred             ceeCCcccceeecCcCHHHHHhhcCCCEEEEEEecCC---CCCCCCC
Confidence            344444567899999999999  58899999999987   6888886

>1pca_A Procarboxypeptidase A PCPA; hydrolase(C-terminal peptidase); HET: CIT; 2.00A {Sus scrofa} SCOP: d.58.3.1 PDB: 1pyt_A

Probab=100.00  E-value=5.3e-51  Score=441.07  Aligned_cols=264  Identities=19%  Similarity=0.272  Sum_probs=0.0

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHH
Q psy8322          19 PAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREII   98 (651)
Q Consensus        19 ~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~   98 (651)
                      ....++|..||+|+||.++|++|+++||+++++.+||+|+|||+|++++|+++   ..+||.|+|+||+||+||+|++++
T Consensus        98 ~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGR~i~~l~i~~~---~~~kp~v~i~agiHg~E~~g~~~~  174 (403)
T 1pca_A           98 TTSTFNYATYHTLEEIYDFMDILVAEHPALVSKLQIGRSYEGRPIYVLKFSTG---GSNRPAIWIDSGIHSREWITQASG  174 (403)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cccccCccCCCCHHHHHHHHHHHHHHCCCcEEEEEeccCCCCCeEEEEEeCCC---CCCCCEEEEecCCCCCchhhHHHH
Confidence            35678999999999999999999999999999999999999999999999975   256899999999999999999999


Q ss_pred             HHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CC
Q psy8322          99 LRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SN  172 (651)
Q Consensus        99 l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~  172 (651)
                      ++|++.|+.+| +.|+.++.||++++|+|||++|||||+++++++|  ||+|.   |.||.|||||||||++|...+ +.
T Consensus       175 ~~l~~~L~~~y-~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~n~~GvDLNRnfp~~w~~~g~s~  253 (403)
T 1pca_A          175 VWFAKKITENY-GQNSSFTAILDSMDIFLEIVTNPNGFAFTHSDNRLWRKTRSKASGSLCVGSDSNRNWDAGFGGAGASS  253 (403)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HHHHHHHHHhc-cCCHHHHHHHhCCcEEEEeeecCCcceecccCccceeccCCCCCCCcccCcccccCCccccccCCCCC
Confidence            99999999988 7789999999999999999999999999998888  55553   568999999999999999765 56


Q ss_pred             CCC---CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcc---
Q psy8322         173 IPT---LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS---  245 (651)
Q Consensus       173 ~p~---y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  245 (651)
                      +||   |+|+.|+|||||+||+++++.. ++.+++|+|+++++++|||++++..+++.   ..+.+....+++...+   
T Consensus       254 ~pc~~~y~G~~~~sepEt~al~~~~~~~~~~~~~idlHs~~~~~~yPy~~~~~~~~d~---~~~~~la~~~a~a~~~~~g  330 (403)
T 1pca_A          254 SPCAETYHGKYPNSEVEVKSITDFVKNNGNIKAFISIHSYSQLLLYPYGYKTQSPADK---SELNQIAKSAVAALKSLYG  330 (403)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CCcccccCCCCCCCcHHHHHHHHHHHhcCCeEEEEEEcCCCCeEEeCCCCCCCCCCCH---HHHHHHHHHHHHHHHHhhC
Confidence            898   9999999999999999999666 49999999999999999999987655432   2221111111111111   


Q ss_pred             cCCccccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         246 NIPTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       246 ~~~~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      ..+..++.+..+|+++|++.||+  .++++.+++|+++.   +.|||.+
T Consensus       331 ~~y~~g~~~~~~y~~~G~~~Dw~y~~g~~~~~T~El~~~---g~~Gf~l  376 (403)
T 1pca_A          331 TSYKYGSIITVIYQASGGVIDWTYNQGIKYSFSFELRDT---GRRGFLL  376 (403)
T ss_dssp             -------------------------------------------------
T ss_pred             CCceeCCccccceecCccHHHHHHHcCCcEEEEEEeCCC---CCCCCCC
Confidence            11334445667899999999998  47889999999987   6888876

>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344}

Probab=100.00  E-value=4.8e-36  Score=322.65  Aligned_cols=176  Identities=23%  Similarity=0.311  Sum_probs=158.1

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHH
Q psy8322          21 AGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILR  100 (651)
Q Consensus        21 ~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~  100 (651)
                      ..|.|..++||+++.++|+.|+ ++| .+++.+||+|+|||+|++++|+++.....+||.|+|+||+||+||+|++++++
T Consensus       125 ~~fa~~~pytY~~~~~~l~~l~-~~p-~v~~~~iG~S~eGR~I~~l~I~~~~~~~~~kp~V~i~agiHg~E~~g~~~~~~  202 (403)
T 3k2k_A          125 IHYAYFEPYSEERHSEFLGAVQ-QMP-QASVVELGRTVEGRPMSLVVLGTPDEAGAAKKKVWIIARQHPGESMAEWFIEG  202 (403)
T ss_dssp             EEEESSCCCCHHHHHHHHHHHT-TST-TEEEEEEEECTTSCEEEEEEECCCC----CCEEEEEEECSSTTCTHHHHHHHH
T ss_pred             EEEEccCCCCHHHHHHHHHHHh-hCC-CeEEEEeccCCCCCEEEEEEEeCCCCcCCCCCEEEEEeccCCCCccHHHHHHH
Confidence            4478889999999999999997 577 78999999999999999999998543334799999999999999999999999


Q ss_pred             HHHHHHH--HhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCC
Q psy8322         101 LLEHLVV--EYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVS  178 (651)
Q Consensus       101 ~~~~L~~--~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G  178 (651)
                      +++.|+.  +| +.|+.++.||++++|+|||++||||+++.+        .|.||.|+||||||+              |
T Consensus       203 ll~~L~~~~~y-~~d~~~~~Ll~~~~~~ivP~lNPDG~~~~~--------~R~n~~GvDLNRnf~--------------~  259 (403)
T 3k2k_A          203 LVKRLVGWGDW-SGDPVARKLYDHATFYIVPNMNPDGSVHGN--------LRTNAAGANLNREWM--------------E  259 (403)
T ss_dssp             HHHHHTTCGGG-TTCCHHHHHHHHEEEEEESCSCHHHHHTTC--------SSCCTTSCCGGGCSS--------------S
T ss_pred             HHHHHHhcccc-ccCHHHHHHhhccEEEEEeccCchHHhhcc--------cccCCCCCCcccccc--------------c
Confidence            9999998  66 678999999999999999999999999865        589999999999998              6


Q ss_pred             CCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccc--cCCCC
Q psy8322         179 TSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSF--YGESK  224 (651)
Q Consensus       179 ~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~--~~~~~  224 (651)
                      +.|++|||+++++++++++++.+++|+|++++   +||++.  +...|
T Consensus       260 ~~~~sepEt~al~~~~~~~~~~~~iDlHs~~~---~P~~f~~g~~~~p  304 (403)
T 3k2k_A          260 PDAERSPEVLVVRDAIHAIGCDLFFDIHGDED---LPYVFAAGSEMLP  304 (403)
T ss_dssp             CCTTTCHHHHHHHHHHHHHCCSEEEEEEEESS---CCSBEEECSTTST
T ss_pred             CCcCCCHHHHHHHHHHHhcCCcEEEEeccCCC---CCCccccCcccCC
Confidence            78999999999999999999999999999999   699997  44433

>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans}

Probab=100.00  E-value=1.4e-35  Score=318.24  Aligned_cols=170  Identities=21%  Similarity=0.322  Sum_probs=154.9

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHH
Q psy8322          21 AGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILR  100 (651)
Q Consensus        21 ~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~  100 (651)
                      ..|.|..++||+++.++|+.++ ++| ++++.+||+|+|||+|++++|+++.   .+||.|+|.|++||+||+|++++++
T Consensus       123 ~~fay~~pyty~~~~~~l~~l~-~~~-~v~~~~iG~S~eGR~i~~l~i~~~~---~~kp~V~i~agiHg~E~~g~~~~~~  197 (395)
T 3l2n_A          123 IQIAYFTPYSYERHLDLISAVQ-LHP-LVSTEHLGLTLDGRDMTLVKVGDDD---PSKKSIWITARQHPGETMAEWLVEG  197 (395)
T ss_dssp             EEEESSCCCCHHHHHHHHHHGG-GST-TEEEEEEEECTTSCEEEEEEESCCC---TTSEEEEEEECSSTTCTHHHHHHHH
T ss_pred             EEEEecCCCCHHHHHHHHHHHh-cCC-ceEEEEEEEcCCCCEEEEEEEecCC---CCCcEEEEEcccCCCCchHHHHHHH
Confidence            3477788899999999999997 477 7899999999999999999999863   4689999999999999999999999


Q ss_pred             HHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCC
Q psy8322         101 LLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTS  180 (651)
Q Consensus       101 ~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~  180 (651)
                      +++.|+.   +.|+.++.||++++|+|||++||||+++.+        +|.||.|+|||||||              |+.
T Consensus       198 ll~~L~~---~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~--------~R~n~~GvDLNRnf~--------------g~~  252 (395)
T 3l2n_A          198 LLNQLLD---NDCPTSKALLDKANFYIVPNMNPDGSVRGH--------LRTNAVGANLNREWQ--------------TPS  252 (395)
T ss_dssp             HHHHHTC---TTSHHHHHHHHHEEEEEESCSCHHHHHTTC--------SSCCTTSCCGGGCSS--------------SCC
T ss_pred             HHHHHhh---cCCHHHHHHhhCcEEEEEeccCCchhhhcc--------cccccCCCCcccccC--------------CCC
Confidence            9999997   468999999999999999999999999865        589999999999998              688


Q ss_pred             CCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccc--cCCC
Q psy8322         181 QSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSF--YGES  223 (651)
Q Consensus       181 ~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~--~~~~  223 (651)
                      |++|||++++++++.++++.+++|+|++++   +||++.  +...
T Consensus       253 ~~sepEt~a~~~~l~~~~~~~~iDlHs~~~---~p~~f~~g~~~~  294 (395)
T 3l2n_A          253 LERSPEVYYVVNKMHETGVDLFYDVHGDEG---LPYVFLAGCEGI  294 (395)
T ss_dssp             TTTCHHHHHHHHHHHHHCCSEEEEEEEESS---CSSBEEECCTTS
T ss_pred             cCCCHHHHHHHHHHHhCCCcEEEEeccCCC---CCceEeccccCC
Confidence            999999999999999999999999999999   599997  4443

>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A*

Probab=100.00  E-value=3.1e-34  Score=308.02  Aligned_cols=225  Identities=19%  Similarity=0.231  Sum_probs=176.4

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHH
Q psy8322          21 AGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILR  100 (651)
Q Consensus        21 ~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~  100 (651)
                      ..|.|..++||+++.++|++|+ ++| .+++.+||+|+|||+|++++|+++.   .+||.|+|+||+||+||+|++++++
T Consensus       118 ~~fa~~~pyty~~~~~~l~~l~-~~p-~v~~~~iG~S~eGR~i~~l~i~~~~---~~kp~v~i~agiHg~E~~g~~~~~~  192 (388)
T 4a37_A          118 VRFAYFEPYSRERHARLVERAL-GIE-GVERLAVGTSVQGRDIELLRVRRHP---DSHLKLWVIAQQHPGEHMAEWFMEG  192 (388)
T ss_dssp             EEEESSCCCCHHHHHHHHHHHT-TST-TEEEEEEEECTTSCEEEEEEECCCT---TCCEEEEEEECSSTTCTHHHHHHHH
T ss_pred             EEEEccCCCCHHHHHHHHHHHH-hCC-CcEEEEeeecCCCCeEEEEEEecCC---CCCcEEEEEcccCCCCchHHHHHHH
Confidence            4467888999999999999997 577 7899999999999999999999753   4689999999999999999999999


Q ss_pred             HHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCC
Q psy8322         101 LLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTS  180 (651)
Q Consensus       101 ~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~  180 (651)
                      +++.|+.   +.|+.++.||++++|+|||++||||+++.+        +|.||.|+||||||+              ++.
T Consensus       193 li~~L~~---~~d~~~~~ll~~~~~~ivP~~NPDG~~~~~--------~R~n~~GvDLNRnf~--------------~~~  247 (388)
T 4a37_A          193 LIERLQR---PDDTEMQRLLEKADLYLVPNMNPDGAFHGN--------LRTNAAGQDLNRAWL--------------EPS  247 (388)
T ss_dssp             HHHHTTC---SSCHHHHHHHHHEEEEEESCSCHHHHHTTC--------SSCCTTSCCGGGCSS--------------SCC
T ss_pred             HHHHHhh---CCCHHHHhhhcCeEEEEEeccCchHHHhcC--------CcccCCCcCCCCCCC--------------CCC
Confidence            9999986   468999999999999999999999999864        589999999999998              577


Q ss_pred             CCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccc--cCCCCCCCCchhhhhhhhHHHHhhcccCCcccc--cccc
Q psy8322         181 QSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSF--YGESKNNINNHDLNRQFPDYFRHNRSNIPTLVS--TSQS  256 (651)
Q Consensus       181 ~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~  256 (651)
                      +++|||+++++++++++++.+++|+|++++   +||++.  +...++.  +..+.+..........+. ..+..  ....
T Consensus       248 ~~s~pEt~al~~~~~~~~~~~~iDlHs~~~---~p~~~~yg~~~~p~~--~~~l~~la~~~~~al~~~-~df~t~~~y~~  321 (388)
T 4a37_A          248 AERSPEVWFVQQEMKRHGVDLFLDIHGDEE---IPHVFAAGCEGNPGY--TPRLERLEQRFREELMAR-GEFQIRHGYPR  321 (388)
T ss_dssp             TTTCHHHHHHHHHHHHHCCSEEEEEEEESS---CSSCEEECCTTCTTC--CHHHHHHHHHHHHHHHHH-SSCCSSSCSCC
T ss_pred             cccCHHHHHHHHHHHhcCCcEEEEeccCCC---CCCeEecCCccCCCc--HHHHHHHHHHHHHHHHHH-hccCCCcccCC
Confidence            899999999999999999999999999999   799997  3332211  222332222222211111 11111  1222


Q ss_pred             ccccchh---hhcccC---CCCeEEEEEeeCc
Q psy8322         257 IDPEVQA---VIDWMN---SVPFVMSLQLHGG  282 (651)
Q Consensus       257 ~~~~~g~---~~dw~~---~~p~~~t~el~g~  282 (651)
                      .++..+.   ..+|+.   +. .++|+|++.+
T Consensus       322 ~~~~~~~l~~a~~~~~~~~g~-~s~TlEmpf~  352 (388)
T 4a37_A          322 SAPGQANLALACNFVGQTYDC-LAFTIEMPFK  352 (388)
T ss_dssp             CCTTCCCTTSHHHHHHHHHTC-EEEEEEEESS
T ss_pred             cCCCchhhhHHHHHHHhhcCc-eEEEEeCCCC
Confidence            3454444   456652   44 7899999866

>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis}

Probab=100.00  E-value=1.1e-34  Score=299.16  Aligned_cols=218  Identities=14%  Similarity=0.142  Sum_probs=170.3

Q ss_pred             CCCCHHHHHHHHHHHHHHcCCc-EEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHH
Q psy8322          27 NYHNYDLMREELENFTRVYANM-TELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHL  105 (651)
Q Consensus        27 ~y~~~~ei~~~l~~l~~~~p~~-~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L  105 (651)
                      .+++|+||.++|++|+++||++ +++.+||+|+ ||||++++++++   ..++|.|+|+||+||+||+|++++++|++.|
T Consensus        17 ~~~~~~ei~~~l~~l~~~~p~~~~~~~~iG~S~-grpl~~~~~~~~---~~~~p~v~i~~giHg~E~~g~~~~~~l~~~l   92 (275)
T 2qvp_A           17 FECQSTDIQRFYSLLAIETERLGLGSKILGQAG-HHPLYLLQSPGQ---KAGLPNLLISAGFHGEESAGPWGLLHFLSQL   92 (275)
T ss_dssp             TTEETTCHHHHHHHHHHHHHHHTCEEEEEEEET-TEEEEEEECSSC---CTTSCEEEEEECSSTTCTHHHHHHHHHHHHC
T ss_pred             ccCCHHHHHHHHHHHHHHCCCCceEEEEecccC-CceeEEEECCCC---CCCCcEEEEEccCCCCcHHHHHHHHHHHHHH
Confidence            4689999999999999999999 9999999999 999999987654   3568999999999999999999999999988


Q ss_pred             HHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcH
Q psy8322         106 VVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDP  185 (651)
Q Consensus       106 ~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sep  185 (651)
                      +          ..+|++++|+|||++||||+++.+         |.||.|+|||||||++|...        |+.+.+||
T Consensus        93 ~----------~~~l~~~~~~ivP~~NPdG~~~~~---------R~n~~g~DlNR~f~~~~~~~--------~~~~~~~p  145 (275)
T 2qvp_A           93 D----------GELFKRVNLSVLPLVNPTGFAKGH---------RFNELGENPNRGFFIENGKA--------KPGADTSA  145 (275)
T ss_dssp             C----------SGGGGTCEEEEECCSCHHHHHHTC---------SSCTTSCCTTSCCEEETTEE--------ECCTTCCH
T ss_pred             H----------HHHhcCCeEEEEECcChHHhhccc---------ccCCCCccCCCCCCcccccC--------CCCCCCcH
Confidence            6          256789999999999999999875         88999999999999888643        33456899


Q ss_pred             HHHHHHHHHHh---CCcEEEEEEecC---ceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhc--cc---CCc-cccc
Q psy8322         186 EVQAVIDWMNS---VPFVMSLQLHGG---NVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNR--SN---IPT-LVST  253 (651)
Q Consensus       186 Et~al~~~~~~---~~~~~~i~~H~~---~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~---~~~-~~~~  253 (651)
                      |+++++++++.   .++.+++|+|++   .+.++|||+++..+       ..+...+.+.+....  ..   +.. ....
T Consensus       146 E~~a~~~~~~~~~~~~~~~~idlHs~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~  218 (275)
T 2qvp_A          146 EGRILLEHAHLLQVASRDGILTCHEDVLMTDTYVYTFEPSQAP-------GRFSHSLRDALGQYFPIAADGDVDNCPVRS  218 (275)
T ss_dssp             HHHHHHHTHHHHHHHTTTCEEEEEEETTCSSBEEEEECSSSSC-------CHHHHHHHHHHHTTSCBCCSEEETTEEEBT
T ss_pred             HHHHHHHHHHHhccCCceEEEEecCCCCCCCeEEecCCCCCCh-------HHHhHHHHHHHHhhCcccccCCcCCCCccC
Confidence            99999999653   579999999987   57889999986332       112211111111111  00   100 0111


Q ss_pred             cccccccchhhhccc--CCCCeEEEEEeeCc
Q psy8322         254 SQSIDPEVQAVIDWM--NSVPFVMSLQLHGG  282 (651)
Q Consensus       254 ~~~~~~~~g~~~dw~--~~~p~~~t~el~g~  282 (651)
                      ....|+.+|++.+|.  .+.++.+|+|++..
T Consensus       219 g~~~y~~~g~~~d~~~~~~~~~~~T~Elp~~  249 (275)
T 2qvp_A          219 GVIFNHFDTSFESFLVRSGARVGCCSETPGQ  249 (275)
T ss_dssp             TEEESCCSSSHHHHHHHTTCSSEEEEEEETT
T ss_pred             ceEecCCCCchhccccccCCcEEEEEeCCCC
Confidence            234588899999988  47789999999654

>1m4l_A Carboxypeptidase A; metalloproteinase, metalloexoproteinase, hydrolase; 1.25A {Bos taurus} SCOP: c.56.5.1 PDB: 1cpx_A 1arl_A 1f57_A 2rfh_A* 3i1u_A* 1arm_A 1ell_P 1elm_P 1ee3_P 1zlh_A 2abz_A 3hlp_A 3huv_A 1yme_A* 3fvl_A* 3fx6_A* 2ctc_A* 1hdq_A 2ctb_A* 3kgq_A* ...

Probab=100.00  E-value=1.4e-34  Score=302.98  Aligned_cols=221  Identities=18%  Similarity=0.179  Sum_probs=174.5

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..++++..|.    ++       |||+|++|+|+++   +..||+|+++|+||||||+|++++++++++|+.+|+. 
T Consensus        28 ~~p~~~~~~~iG~----S~-------eGr~i~~l~i~~~---~~~~p~v~i~agiHg~E~~g~~~~~~l~~~L~~~y~~-   92 (307)
T 1m4l_A           28 EHPQLVSKLQIGR----SY-------EGRPIYVLKFSTG---GSNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQ-   92 (307)
T ss_dssp             HCTTTEEEEEEEE----CT-------TSCEEEEEEECSS---CSSCCEEEEEECSSTTCHHHHHHHHHHHHHHHHHTTT-
T ss_pred             HCCCceEEEeCcc----cC-------CCCeEEEEEEECC---CCCCcEEEEEcccccCcccCHHHHHHHHHHHHHHhcC-
Confidence            4565677777787    88       9999999999875   2468999999999999999999999999999999976 


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC----------------CCCC
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN----------------KPAL  408 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~----------------~~~~  408 (651)
                      |+.+++||++++|+|||++||||++++++++|.|||+|.     ++.|+|||||||+.|.                ...+
T Consensus        93 d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~r~wrk~r~~~~~~n~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~s  172 (307)
T 1m4l_A           93 DPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANS  172 (307)
T ss_dssp             SHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBCCTTSTTBCCSSTTC
T ss_pred             CHHHHHHHhcceEEEEecccCccceeeecCCcceecCCCCCCCCcccCCCCCCCCCccCcCCCCCCCCCccccCCCCCCC
Confidence            899999999999999999999999999999999999985     6899999999997653                3346


Q ss_pred             CCChHHHHHHHHHhh--ccCCCCcCC---------CCCCCCc--------------------cccccCcceeccceEecc
Q psy8322         409 TPDTDVFLHLASTYA--RLHPTMHMK---------RPCPGNT--------------------VLKFENGVTNGAAWYSFS  457 (651)
Q Consensus       409 ~~~~~~f~~l~~~~a--~~~~~~~~~---------~~~~~~~--------------------~~~~~~gi~n~~~~y~~s  457 (651)
                      +||++.+..+.....  ..+..+|..         ..|....                    +..+..|.. ...||+++
T Consensus       173 epEt~al~~~~~~~~~~~~~idlH~~~~~~~~P~~~~~~~~~~~~~~~~la~~~a~a~~~~~g~~y~~g~~-~~~~y~~~  251 (307)
T 1m4l_A          173 EVEVKSIVDFVKDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKYGSI-ITTIYQAS  251 (307)
T ss_dssp             SHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSCSCCCTTHHHHHHHHHHHHHHHHHHHCCCCEEEEH-HHHSCCCC
T ss_pred             cHHHHHHHHHHHhCCCeEEEEEEecCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCceECCc-cccccccC
Confidence            778888887775441  111122221         1111000                    000111111 22489999


Q ss_pred             CcccchhhhccceeEEEEEecccC---C-CCCCCcchhhhhchHHHHHHHHhh
Q psy8322         458 GGMADYNYLYHGCLELTLEISCCR---Y-PAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       458 G~~~D~~y~~~~~~~~T~El~~~~---~-p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      |+++||+|..+++++||+||+|++   | ||.++|.++|++++++++.++.++
T Consensus       252 G~~~D~~y~~g~~~~~T~El~~~g~~Gf~lp~~~i~~~~~e~~~~l~~~~~~~  304 (307)
T 1m4l_A          252 GGSIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHT  304 (307)
T ss_dssp             SCHHHHHHHTTCCEEEEEEESCSSSSTTSCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHhhcCCCEEEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998888999999999763   3 789999999999999999988764

>2bo9_A Carboxypeptidase A4; metallocarboxypeptidase, X-RAY endogenous protein inhibitor, metalloprotease carboxypeptidase, hydrolase; HET: NAG; 1.6A {Homo sapiens} SCOP: c.56.5.1 PDB: 4a94_A 2pcu_A*

Probab=100.00  E-value=1.9e-34  Score=302.18  Aligned_cols=222  Identities=20%  Similarity=0.237  Sum_probs=174.4

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..++++..|.    ++       |||+|++|+|++++  ...||+|+++|+||||||+|++++++++++|+.+|.. 
T Consensus        26 ~~p~~~~~~~iG~----S~-------eGr~i~~l~i~~~~--~~~~p~v~i~agiHg~E~~g~~~~~~l~~~L~~~y~~-   91 (308)
T 2bo9_A           26 DFPDLARRVKIGH----SF-------ENRPMYVLKFSTGK--GVRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQR-   91 (308)
T ss_dssp             HSTTTEEEEEEEE----CT-------TCCEEEEEEECSST--TSCCCEEEEEECSSTTCHHHHHHHHHHHHHHHHHTTT-
T ss_pred             HCCCcEEEEeccc----cC-------CCCeEEEEEecCCC--CCCCceEEEEccccCcchhhHHHHHHHHHHHHHhhcC-
Confidence            4555677777777    88       99999999999754  3568999999999999999999999999999999976 


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCCC----------------CCCC
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTKN----------------KPAL  408 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~~----------------~~~~  408 (651)
                      |++++.||++++|+|||++||||+++.+.++|+|||+|.+     +.|+|||||||..|.                ...+
T Consensus        92 d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~r~wr~~r~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~s  171 (308)
T 2bo9_A           92 DPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANS  171 (308)
T ss_dssp             SHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSSBCCCGGGCSSSSTTSSSSBSCTTSTTBCCSSTTC
T ss_pred             CHHHHHHHhcCeEEEEecccCccceeeeccccceecCCCCCCCCCccCCcCCCCCccccCCCCCCCCCCccccCCCCCCC
Confidence            8999999999999999999999999999999999999974     899999999997653                2356


Q ss_pred             CCChHHHHHHHHHhh--ccCCCCcCCC-----C----C---CCC-----------------ccccccCcceeccceEecc
Q psy8322         409 TPDTDVFLHLASTYA--RLHPTMHMKR-----P----C---PGN-----------------TVLKFENGVTNGAAWYSFS  457 (651)
Q Consensus       409 ~~~~~~f~~l~~~~a--~~~~~~~~~~-----~----~---~~~-----------------~~~~~~~gi~n~~~~y~~s  457 (651)
                      +||++.+..+.+...  ..+..+|...     +    |   .+.                 ....+..|.. ...||+++
T Consensus       172 epEt~a~~~~~~~~~~~~~~idlHs~~~~~~~P~~~~~~~~~~~~~~~~la~~~a~a~~~~~g~~y~~g~~-~~~~y~~~  250 (308)
T 2bo9_A          172 EVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPT-CTTVYPAS  250 (308)
T ss_dssp             SHHHHHHHHHHHHHCCEEEEEEEEESSSEEEESCSSCSSCCTTHHHHHHHHHHHHHHHHHHHCCCCEEEEH-HHHTCCCC
T ss_pred             CHHHHHHHHHHHhCCCeEEEEEEecCCcEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCCceeCCc-cCcccccC
Confidence            788888887774331  1112222211     1    1   100                 0001111111 11389999


Q ss_pred             CcccchhhhccceeEEEEEecccC---C-CCCCCcchhhhhchHHHHHHHHhh
Q psy8322         458 GGMADYNYLYHGCLELTLEISCCR---Y-PAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       458 G~~~D~~y~~~~~~~~T~El~~~~---~-p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      |+++||+|..++++++|+||+|++   | ||+++|.++|++++++++.++.++
T Consensus       251 G~~~D~~~~~~~~~~~T~El~~~~~~gf~~p~~~i~~~~~e~~~~l~~~~~~~  303 (308)
T 2bo9_A          251 GSSIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHV  303 (308)
T ss_dssp             SCHHHHHHHTTCCEEEEEEESCSSSSTTCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CCHHHHHhhcCCcEEEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999899999999999763   4 788999999999999999988765

>1aye_A PCPA2, procarboxypeptidase A2; serine protease, zymogen, hydrolase; 1.80A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 1o6x_A

Probab=100.00  E-value=3.1e-34  Score=309.99  Aligned_cols=228  Identities=20%  Similarity=0.228  Sum_probs=180.2

Q ss_pred             hhhhccc----CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHH
Q psy8322         262 QAVIDWM----NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILR  337 (651)
Q Consensus       262 g~~~dw~----~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~  337 (651)
                      ..+.+|+    ..+|..++++..|.    ++       |||+|++|+|++++    .||+|+++|+||||||+|++++++
T Consensus       109 ~ei~~~l~~l~~~~p~~v~~~~iG~----S~-------eGR~i~~l~i~~~~----~kp~v~i~agiHg~E~~g~~~~~~  173 (401)
T 1aye_A          109 EEISQEMDNLVAEHPGLVSKVNIGS----SF-------ENRPMNVLKFSTGG----DKPAIWLDAGIHAREWVTQATALW  173 (401)
T ss_dssp             HHHHHHHHHHHHHCTTTEEEEEEEE----CT-------TSCEEEEEEECSSS----SCCEEEEEECSSTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCcEEEEEccc----CC-------CCCeeEEEEecCCC----CCceEEEecccCCCccccHHHHHH
Confidence            3444455    36677788888887    88       99999999998764    689999999999999999999999


Q ss_pred             HHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC--------
Q psy8322         338 LLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN--------  404 (651)
Q Consensus       338 ~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~--------  404 (651)
                      ++++|+.+|++ |+.++.||++++|+|||++||||+++++.++|+|||+|.     ++.|+|||||||+.|.        
T Consensus       174 l~~~L~~~y~~-d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~n~~GvDLNRnfp~~w~~~g~s~~p  252 (401)
T 1aye_A          174 TANKIVSDYGK-DPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNP  252 (401)
T ss_dssp             HHHHHHHHTTT-SHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBCCT
T ss_pred             HHHHHHHHhCC-CHHHHHHHhcCeEEEEeeEcCCCceecccccceeccCCCCCCCCcccccccccCCccccccCCCCCCC
Confidence            99999999976 899999999999999999999999999999999999984     6899999999997654        


Q ss_pred             --------CCCCCCChHHHHHHHHHhh--ccCCCCcCC---------CCCC---CC-----------------ccccccC
Q psy8322         405 --------KPALTPDTDVFLHLASTYA--RLHPTMHMK---------RPCP---GN-----------------TVLKFEN  445 (651)
Q Consensus       405 --------~~~~~~~~~~f~~l~~~~a--~~~~~~~~~---------~~~~---~~-----------------~~~~~~~  445 (651)
                              .+.++||++.+..+..++.  .....+|..         ..|.   +.                 .+..|..
T Consensus       253 c~~~y~G~~~~sepEt~al~~~~~~~~~~~~~idlHs~~~~~~~Py~~~~~~~~~~~~~~~la~~~a~al~~~~g~~y~~  332 (401)
T 1aye_A          253 CSDSYHGPSANSEVEVKSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTKLDDFDELSEVAQKAAQSLRSLHGTKYKV  332 (401)
T ss_dssp             TSTTBCCSSTTCSHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSSCSCCTTHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred             CccccCCCCCCcCHHHHHHHHHHHccCCEEEEEEEcCCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCcee
Confidence                    3346788888888877661  111122221         1111   10                 0001111


Q ss_pred             cceeccceEeccCcccchhhhccceeEEEEEeccc----CCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         446 GVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCC----RYPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       446 gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~----~~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      |.. ...||+++|+++||+|..++|++||+||+|+    +.||.++|.++|++++++++.++.++
T Consensus       333 g~~-~~~~y~~~G~~~Dw~y~~g~~~s~T~El~~~g~~gf~lp~~~i~~~~~e~~~~l~~~~~~~  396 (401)
T 1aye_A          333 GPI-CSVIYQASGGSIDWSYDYGIKYSFAFELRDTGRYGFLLPARQILPTAEETWLGLKAIMEHV  396 (401)
T ss_dssp             EEH-HHHTCCCSSCHHHHHHHTTCSEEEEEEESCSSSSTTSCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CCc-cceeeecCcCHHHHHhHcCCCEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            111 1258999999999999988899999999975    44889999999999999999988764

>2boa_A Carboxypeptidase A4; metalloprocarboxypeptidase, X-RAY zymogen, metalloprotease, exopropeptidase, hydrolase; HET: NAG; 2.20A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1

Probab=100.00  E-value=7.9e-34  Score=307.36  Aligned_cols=230  Identities=20%  Similarity=0.230  Sum_probs=179.8

Q ss_pred             hhhhccc----CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHH
Q psy8322         262 QAVIDWM----NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILR  337 (651)
Q Consensus       262 g~~~dw~----~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~  337 (651)
                      ..+.+|+    ..+|..++++..|.    ++       |||+|++|+|++++  ..++|+|+++|+||||||+|++++++
T Consensus       110 ~ei~~~l~~l~~~~p~~v~~~~iG~----S~-------eGR~i~~l~i~~~~--~~~kp~v~i~agiHg~E~~g~~~~~~  176 (404)
T 2boa_A          110 EAIYHEMDNIAADFPDLARRVKIGH----SF-------ENRPMYVLKFSTGK--GVRRPAVWLNAGIHSREWISQATAIW  176 (404)
T ss_dssp             HHHHHHHHHHHHHSTTTEEEEEEEE----CT-------TCCEEEEEEECSST--TSCCCEEEEEECSSTTCHHHHHHHHH
T ss_pred             HHHHHHHHHHHHHCCCceEEEEecc----CC-------CCCeeEEEEeccCC--CCCCCeEEEeCCCCCCCccCHHHHHH
Confidence            3444555    35777788888887    88       99999999999753  35789999999999999999999999


Q ss_pred             HHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC--------
Q psy8322         338 LLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN--------  404 (651)
Q Consensus       338 ~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~--------  404 (651)
                      ++++|+.+|+. |+.++.||++++|+|||++||||+++++.++|+|||+|.     ++.|+|||||||+.|.        
T Consensus       177 li~~L~~~y~~-d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p  255 (404)
T 2boa_A          177 TARKIVSDYQR-DPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNP  255 (404)
T ss_dssp             HHHHHHHSTTT-SHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTSSCBCCCGGGCSSSSTTCTTCBSCT
T ss_pred             HHHHHHHhhcC-CHHHHHHHhCCeEEEEeeecCcchhhcccccceeecCCCCCCCCCCccccccCCCCccccCCCCCCCC
Confidence            99999999976 999999999999999999999999999999999999996     5899999999997653        


Q ss_pred             --------CCCCCCChHHHHHHHHHhh--ccCCCCcCCC---------CC---CCC-----------------ccccccC
Q psy8322         405 --------KPALTPDTDVFLHLASTYA--RLHPTMHMKR---------PC---PGN-----------------TVLKFEN  445 (651)
Q Consensus       405 --------~~~~~~~~~~f~~l~~~~a--~~~~~~~~~~---------~~---~~~-----------------~~~~~~~  445 (651)
                              .+.++||++++..+.....  ..+..+|...         .|   ++.                 .+..+..
T Consensus       256 c~e~y~G~~~~sepEt~al~~~~~~~~~~~~~idlHs~~~~~l~Py~~~~~~~~~~~~l~~la~~~a~al~~~~g~~y~~  335 (404)
T 2boa_A          256 CSEVYHGPHANSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQV  335 (404)
T ss_dssp             TSTTBCCSSTTCSHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSCSCCCTTHHHHHHHHHHHHHHHHHHHCCCCEE
T ss_pred             CccccCCCCCCCCHHHHHHHHHHHcCCCEEEEEEEeCCCCEEEeccCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCCcee
Confidence                    2356788888887773321  1112222211         11   100                 0001111


Q ss_pred             cceeccceEeccCcccchhhhccceeEEEEEecccC---C-CCCCCcchhhhhchHHHHHHHHhh
Q psy8322         446 GVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCR---Y-PAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       446 gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~---~-p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      |.. ...||+++|+++||+|..+++++||+||+|++   | ||+++|.++|+++++++..++..+
T Consensus       336 g~~-~~~~y~~~G~~~D~~y~~~~~~s~T~El~~~g~~Gf~lp~~~i~~~~~e~~~~l~~~~~~~  399 (404)
T 2boa_A          336 GPT-CTTVYPASGSSIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHV  399 (404)
T ss_dssp             EEH-HHHSCCCCSCHHHHHHHTTCSEEEEEEESCSSSSTTSCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CCc-ccceeecCcCHHHHHhhcCCCEEEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            111 11489999999999999899999999999764   3 788999999999999999988764

>1pca_A Procarboxypeptidase A PCPA; hydrolase(C-terminal peptidase); HET: CIT; 2.00A {Sus scrofa} SCOP: d.58.3.1 PDB: 1pyt_A

Probab=100.00  E-value=8.6e-35  Score=314.33  Aligned_cols=221  Identities=18%  Similarity=0.191  Sum_probs=0.0

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..++++..|.    ++       |||+|++|+|+++   +..||+|+++|+||||||+|++++++++++|+.+|+. 
T Consensus       123 ~~p~~v~~~~iG~----S~-------eGR~i~~l~i~~~---~~~kp~v~i~agiHg~E~~g~~~~~~l~~~L~~~y~~-  187 (403)
T 1pca_A          123 EHPALVSKLQIGR----SY-------EGRPIYVLKFSTG---GSNRPAIWIDSGIHSREWITQASGVWFAKKITENYGQ-  187 (403)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             HCCCcEEEEEecc----CC-------CCCeEEEEEeCCC---CCCCCEEEEecCCCCCchhhHHHHHHHHHHHHHhccC-
Confidence            4565666666666    66       9999999999875   2468999999999999999999999999999999976 


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC----------------CCCC
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN----------------KPAL  408 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~----------------~~~~  408 (651)
                      |+.++.||++++|+|||++||||+++++.++|+|||+|.     ++.|+|||||||+.|.                ...+
T Consensus       188 d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~n~~GvDLNRnfp~~w~~~g~s~~pc~~~y~G~~~~s  267 (403)
T 1pca_A          188 NSSFTAILDSMDIFLEIVTNPNGFAFTHSDNRLWRKTRSKASGSLCVGSDSNRNWDAGFGGAGASSSPCAETYHGKYPNS  267 (403)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             CHHHHHHHhCCcEEEEeeecCCcceecccCccceeccCCCCCCCcccCcccccCCccccccCCCCCCCcccccCCCCCCC
Confidence            899999999999999999999999999999999999985     5799999999997653                3346


Q ss_pred             CCChHHHHHHHHHhh--ccCCCCcCCC---------CC---CCC-----------------ccccccCcceeccceEecc
Q psy8322         409 TPDTDVFLHLASTYA--RLHPTMHMKR---------PC---PGN-----------------TVLKFENGVTNGAAWYSFS  457 (651)
Q Consensus       409 ~~~~~~f~~l~~~~a--~~~~~~~~~~---------~~---~~~-----------------~~~~~~~gi~n~~~~y~~s  457 (651)
                      +||++++..+.....  .....+|...         .|   ++.                 .+..+..|.. ...||+++
T Consensus       268 epEt~al~~~~~~~~~~~~~idlHs~~~~~~yPy~~~~~~~~d~~~~~~la~~~a~a~~~~~g~~y~~g~~-~~~~y~~~  346 (403)
T 1pca_A          268 EVEVKSITDFVKNNGNIKAFISIHSYSQLLLYPYGYKTQSPADKSELNQIAKSAVAALKSLYGTSYKYGSI-ITVIYQAS  346 (403)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             cHHHHHHHHHHHhcCCeEEEEEEcCCCCeEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhhCCCceeCCc-cccceecC
Confidence            778777776653221  1111222210         01   000                 0001111211 12489999


Q ss_pred             CcccchhhhccceeEEEEEecccC---C-CCCCCcchhhhhchHHHHHHHHhh
Q psy8322         458 GGMADYNYLYHGCLELTLEISCCR---Y-PAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       458 G~~~D~~y~~~~~~~~T~El~~~~---~-p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      |+++||+|..++|++||+||+|++   | ||.++|.++|++++++++.++.++
T Consensus       347 G~~~Dw~y~~g~~~~~T~El~~~g~~Gf~lp~~~i~~~~~e~~~~l~~~~~~~  399 (403)
T 1pca_A          347 GGVIDWTYNQGIKYSFSFELRDTGRRGFLLPASQIIPTAQETWLALLTIMEHT  399 (403)
T ss_dssp             -----------------------------------------------------
T ss_pred             ccHHHHHHHcCCcEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999998889999999999764   3 889999999999999999887654

>4axv_A MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi}

Probab=99.97  E-value=8.4e-32  Score=272.70  Aligned_cols=192  Identities=22%  Similarity=0.261  Sum_probs=154.9

Q ss_pred             HHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcC
Q psy8322          43 RVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDN  122 (651)
Q Consensus        43 ~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~  122 (651)
                      ++++.+++..+||+|++||||++++++..     +||.++|+||+||+||+|.++++++++.|+.             ++
T Consensus        15 ~r~~~~~~~~~~G~S~~g~pl~~~~~~~~-----~~~~~l~~~g~Hg~E~~g~~~~~~~~~~l~~-------------~~   76 (243)
T 4axv_A           15 ERAAFLITPTSYGKSVLGAPLLYFPAQVE-----SNSRGLILAGTHGDETASIAGLSCALRSLPA-------------EC   76 (243)
T ss_dssp             GTTSCSSCCEEEEECTTSCEEEEBCCCSC-----CTTCCEEEECSSTTCCHHHHHHHHHHHHSCG-------------GG
T ss_pred             hhcCCccCeeeeeecCCCCcEEEEECCCC-----CCCEEEEECCcCCCCHHHHHHHHHHHHhhhh-------------cC
Confidence            46778999999999999999999998764     4789999999999999999999999988864             24


Q ss_pred             ceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCC-C---------C-CCCCC-CCCCCCCCcHHHHHH
Q psy8322         123 TRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRH-N---------R-SNIPT-LVSTSQSIDPEVQAV  190 (651)
Q Consensus       123 ~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~-~---------~-s~~p~-y~G~~~~sepEt~al  190 (651)
                      .+++|||++||||+++.+         |.|+.|+|||||||..+.. .         . +.++| |.|+.|+|||||+|+
T Consensus        77 ~~~~~ip~~Npdg~~~~~---------r~~~~g~dlNR~fp~~~~~~~~~~~~~~~~~~~~~~~~y~G~~~~sePEt~Al  147 (243)
T 4axv_A           77 LKHDVILSMNPDANQLGT---------RANANQVDLNRAFPTQNWTEHGTVYRWSSHTPVRDVKVKTGDKEQLEPEVDAL  147 (243)
T ss_dssp             CCSEEESCSCHHHHHTTC---------SSCTTSBCGGGCSCCTTCCSCCEEECSSTTCSSCCEEEBCCBTTBCCHHHHHH
T ss_pred             ceEEEEEeEcccchhhcc---------ccCCCCCChhhcCCCCCccccccccccccCCCCCChhhcCCCCCcCCHHHHHH
Confidence            578999999999999764         8999999999999975322 1         1 23445 999999999999999


Q ss_pred             HHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccchhhhccc--
Q psy8322         191 IDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWM--  268 (651)
Q Consensus       191 ~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~dw~--  268 (651)
                      .+++.++++.+++++|++...+.||++..            +.+.+.+   ..     .........|+.+|++.||+  
T Consensus       148 ~~~i~~~~~~~~islHs~~~~i~~p~~~~------------~a~~la~---~~-----g~~~~~~~~y~~~Gs~~d~a~~  207 (243)
T 4axv_A          148 ISLIELRRPKFVVSFHEPLAFVDDPAHSD------------LAKWLGK---QF-----NLPIVDDVDYETPGSFGTWCNE  207 (243)
T ss_dssp             HHHHHHHCCSCEEEEECSSCEEECSSSCH------------HHHHHHH---HH-----TCCEECCSSSSSTTCHHHHHHH
T ss_pred             HHHHHhhCCcEEEEecCCcccccCCcchH------------HHHHHHH---Hh-----CCCcccccCCCCCCCHHHHHHH
Confidence            99999999999999999999999987753            1111111   11     11112345678899999999  


Q ss_pred             CCCCeEEEEEeeCc
Q psy8322         269 NSVPFVMSLQLHGG  282 (651)
Q Consensus       269 ~~~p~~~t~el~g~  282 (651)
                      .++| .+|+|++..
T Consensus       208 ~gip-~iT~ELp~~  220 (243)
T 4axv_A          208 RQLP-CITVELPPI  220 (243)
T ss_dssp             TTCC-EEEEECCSC
T ss_pred             CCCc-EEEEeCCCC
Confidence            5888 799999765

>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A*

Probab=99.97  E-value=1.8e-30  Score=266.71  Aligned_cols=157  Identities=18%  Similarity=0.196  Sum_probs=126.0

Q ss_pred             CCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHH
Q psy8322          27 NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLV  106 (651)
Q Consensus        27 ~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~  106 (651)
                      .|+++++..+.|.+.+++..  ++...+|.+ +||||+++++++.   ..+||.|+++||+||+||+|+++++++++.|.
T Consensus        21 ~~~~~~~~~~~l~~~~~~~~--~~~~~~~~~-~~~pl~~i~~~~~---~~~~p~v~i~~giHg~E~~g~~~~~~~~~~l~   94 (275)
T 3b2y_A           21 QSNDIDAFYAQLAEEVNRLG--LKKNTLGSV-DSFAINLYQSASQ---RSDLPSLLISSGFHGEEAAGPWGMLHFLRGLQ   94 (275)
T ss_dssp             ETTCHHHHHHHHHHHHHHHT--CEEEEEEEE-TTEEEEEEECSSC---CTTSCEEEEEECSSTTCTHHHHHHHHHHHHCC
T ss_pred             chHHHHHHHHHHHHhccccc--eEEEEeecc-CCeeEEEEECCCC---CCCCCEEEEEeccCCCcHHHHHHHHHHHHHHh
Confidence            68899999999988877774  467778877 7999999987542   34689999999999999999999999999872


Q ss_pred             HHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHH
Q psy8322         107 VEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPE  186 (651)
Q Consensus       107 ~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepE  186 (651)
                                ..++++++|+|||++||||+++.         .|.||.|||||||||..|            +.|++|||
T Consensus        95 ----------~~ll~~~~i~ivP~~NPdG~~~~---------~R~n~~gvDLNRnf~~~~------------~~~~sepE  143 (275)
T 3b2y_A           95 ----------PALFERVNLSLLPLVNPTGFKAG---------HRFNRFGENPNRGFTLEN------------GKPTPNEH  143 (275)
T ss_dssp             ----------GGGGGTCEEEEECCSCHHHHHTT---------SSSCTTSCCTTSCCCC---------------------C
T ss_pred             ----------HHHHcCceEEEEeCCChhHhhcC---------ccCCCCCCccCcCCCCCC------------CCCCCCCC
Confidence                      37899999999999999999943         377999999999999877            35689999


Q ss_pred             H-------HHHHHHHHhCCcEEEEEEecC-ceeeeecccccc
Q psy8322         187 V-------QAVIDWMNSVPFVMSLQLHGG-NVVASYPYDSFY  220 (651)
Q Consensus       187 t-------~al~~~~~~~~~~~~i~~H~~-~~~~~~P~~~~~  220 (651)
                      +       +++++++++.++.+++|+|++ ....+|+|+++.
T Consensus       144 t~~l~~~~~a~~~~~~~~~~~~~id~H~~~~~~g~y~~~~~~  185 (275)
T 3b2y_A          144 TSLEGKLLLEHAQLLCAASRDGILTCHEDVLMNETYVYSFEP  185 (275)
T ss_dssp             CCHHHHHHHTTHHHHHHHTTTEEEEEEEETTCSSBEEEEECS
T ss_pred             ccccchHHHHHHHHHHhcCCcEEEECCCCCcCCeEEecCCCC
Confidence            9       999999999999999999998 344456776653

>3v38_A Carboxypeptidase T; hydrolase; HET: GOL; 1.50A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A 3prt_A

Probab=99.94  E-value=3.5e-27  Score=247.49  Aligned_cols=226  Identities=22%  Similarity=0.265  Sum_probs=181.9

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..++++..|.    +|       |||+|++|+|++++.....||+|+++|+||||||+|++++++++++|+++|+.
T Consensus        24 ~~~p~~v~~~~iG~----S~-------eGR~i~~l~is~~~~~~~~kp~v~i~~giHa~E~i~~~~~~~~~~~L~~~y~~   92 (326)
T 3v38_A           24 SNYPNIVKKFSIGK----SY-------EGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNYNL   92 (326)
T ss_dssp             HHCTTTEEEEEEEE----CT-------TSCEEEEEEECTTTTSCCCCCEEEEEECSSTTCTHHHHHHHHHHHHHHHTTTT
T ss_pred             HHCCCCEEEEEeeE----cc-------CCCEEEEEEEecCCCCCCCCCEEEEEcccCCCChhHHHHHHHHHHHHHHHhcc
Confidence            35677788888887    88       99999999999865444579999999999999999999999999999999976


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecc--cccCCCCCCC-----ceeEeeccCCCCCCC-----------------
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEG--NCRSGRGRTP-----PFLISLFLPFPVTKN-----------------  404 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~--~~~~~kgr~~-----~~gvdlnrnf~~~~~-----------------  404 (651)
                       |+.+++||++++|+|||++||||++++++.  +|+|||+|.+     +.|||||||||+.|.                 
T Consensus        93 -d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~r~WRknR~~~~~~~~~GvDLNRNf~~~w~~~~g~s~~pc~~~Y~G~  171 (326)
T 3v38_A           93 -DSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGR  171 (326)
T ss_dssp             -SHHHHHHHHHCEEEEECCSCHHHHHHHHTTSSCCCCCSCSCCCTTCSCCCCCGGGCSSTTTTCSSSSBSCTTSTTBCCS
T ss_pred             -CHHHHHHHhCceEEEEeeecCChhhccccCCccccccccCCCCCCCCcCccccccCCCcccccCCCCCCCCCccccCCC
Confidence             899999999999999999999999999875  5999999974     589999999997763                 


Q ss_pred             CCCCCCChHHHHHHHHHhh-------ccCCCCcC---------CCCCCCCc--------------------cccccCcce
Q psy8322         405 KPALTPDTDVFLHLASTYA-------RLHPTMHM---------KRPCPGNT--------------------VLKFENGVT  448 (651)
Q Consensus       405 ~~~~~~~~~~f~~l~~~~a-------~~~~~~~~---------~~~~~~~~--------------------~~~~~~gi~  448 (651)
                      .+.++||++++..+..+..       .....+|.         +..|....                    ...+.  ..
T Consensus       172 ~p~sEpEt~av~~~i~~~~~~~~~~~~~~i~~Hs~~~~il~Pyg~~~~~~~~~~~~~d~~~~~~~a~~~~~~~gY~--~~  249 (326)
T 3v38_A          172 SAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPSDMTQDDFNVFKTMANTMAQTNGYT--PQ  249 (326)
T ss_dssp             STTCSHHHHHHHHHHHHTEETTEECEEEEEEEEESSSEEEESCSSCSCSSCTTSCHHHHHHHHHHHHHHHHHHCCE--EE
T ss_pred             CCCccHHHHHHHHHHHhhccccccCeEEEEEecCCCCEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhcCCC--cC
Confidence            2457889999998887631       01111111         11121100                    00111  22


Q ss_pred             eccceEeccCcccchhhhccceeEEEEEec-----ccCCCCCCCcchhhhhchHHHHHHHHhhcc
Q psy8322         449 NGAAWYSFSGGMADYNYLYHGCLELTLEIS-----CCRYPAPSEIPIHWRSNQNALISWLQQVHR  508 (651)
Q Consensus       449 n~~~~y~~sG~~~D~~y~~~~~~~~T~El~-----~~~~p~~~~i~~~w~~nr~all~~~aqa~~  508 (651)
                      +...||+++|+++||+|...++++||+||+     |+++||+++|+++|++|+++++.++.+++.
T Consensus       250 ~~~~~Y~a~G~s~Dw~y~~~~~~~~T~ELr~~~~~~gF~~p~~~i~~~~~en~~al~~~~~~a~~  314 (326)
T 3v38_A          250 QASDNYITDGDMTDWAYGQHKIFAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKADC  314 (326)
T ss_dssp             EGGGTCCCCSCHHHHHHHHHCCEEEEEEESCSSTTTTTCCCGGGHHHHHHTTHHHHHHHHHHTSC
T ss_pred             ccceeEECCCChhhhHhhcCCeEEEEEEeccCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHccC
Confidence            345689999999999999888999999995     457799999999999999999999998764

>3dgv_A TAFI, carboxypeptidase B2; blood coagulation, fibrinolysis, protein S glycoprotein, hydrolase, metal-binding, metalloprotease, PR secreted, zymogen; HET: NAG NDG FUL BMA; 2.50A {Bos taurus} PDB: 3osl_A 3d68_A* 3d66_A* 3d67_A*

Probab=99.93  E-value=8.2e-27  Score=250.72  Aligned_cols=235  Identities=18%  Similarity=0.187  Sum_probs=189.0

Q ss_pred             cccchhhhccc----CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHH
Q psy8322         258 DPEVQAVIDWM----NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGRE  333 (651)
Q Consensus       258 ~~~~g~~~dw~----~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~  333 (651)
                      |..-..+.+|+    +.+|..++....|.    +|       |||+|++|+|++++  ...||+|++.|+||||||+|++
T Consensus       101 Y~t~~ei~~~l~~L~~~~p~~v~~~~iG~----S~-------eGR~i~~l~is~~~--~~~kp~v~i~~giHg~E~ig~~  167 (401)
T 3dgv_A          101 YHSLNEIYSWIEVMTERYPDMVEKIHIGS----SY-------EKYPLYVLKVSKKE--QRAKNAMWIDCGIHAREWISPA  167 (401)
T ss_dssp             CCCHHHHHHHHHHHHHHCTTTEEEEEEEE----CT-------TCCEEEEEEECCCC--SSCCEEEEEEECSSTTCTHHHH
T ss_pred             cCCHHHHHHHHHHHHHHCCCcEEEEEccc----CC-------CCCEEEEEEecCCC--CCCCcEEEEeCCCCCCCCccHH
Confidence            34444555555    46787888888887    88       99999999999864  3468999999999999999999


Q ss_pred             HHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCC-CCC---
Q psy8322         334 IILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPV-TKN---  404 (651)
Q Consensus       334 ~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~-~~~---  404 (651)
                      ++++++++|+.+|++ |+.+++||++++|+|||++||||++++++++|+|||+|.     ++.|||||||||+ .|.   
T Consensus       168 ~~l~~~~~L~~~y~~-d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~r~wrknR~~~~~~n~~GvDLNRNf~~~~w~~~g  246 (401)
T 3dgv_A          168 FCLWFVGSVTYYYGK-EKMHTNLLKHMDFYIMPVVNVDGYDYTWKKDRMWRKNRSLHEKNACVGTDLNRNFASKHWCGEG  246 (401)
T ss_dssp             HHHHHHHHHHHHTTT-SHHHHHHHHHEEEEEESCSCHHHHHHHHHTCTTCCSCCCCCTTCSSCCCCGGGCSCCTTTTSTT
T ss_pred             HHHHHHHhhhhhccC-CHHHHHHHhCCeEEEEEeeccchhhheeccCcceeecccCCCCCCCCCCChhhcCCcccccccc
Confidence            999999999999976 999999999999999999999999999999999999995     7899999999998 653   


Q ss_pred             -------------CCCCCCChHHHHHHHHHhhc---cCCCCcC---------CCCCC---CC-----------------c
Q psy8322         405 -------------KPALTPDTDVFLHLASTYAR---LHPTMHM---------KRPCP---GN-----------------T  439 (651)
Q Consensus       405 -------------~~~~~~~~~~f~~l~~~~a~---~~~~~~~---------~~~~~---~~-----------------~  439 (651)
                                   .+.++||++++..+..++..   .+..+|.         +..|.   +.                 .
T Consensus       247 ~s~~pc~~~y~G~~p~sepEt~al~~~i~~~~~~~~~~i~lHs~~~~i~yPy~~~~~~~~d~~~~~~la~~~a~a~~~~~  326 (401)
T 3dgv_A          247 ASSSSCSEIYCGTYPESEPEVKAVADFLRRNIKHIKAYISMHSYSQKIVFPYSYSRSRSKDHEELSLVAREAVFAMENIH  326 (401)
T ss_dssp             CBSCTTSTTBCCSSTTCSHHHHHHHHHHHHTTTTEEEEEEEEESSCEEEESCSSSSSCCTTHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCCCcccccCCCCcCcCHHHHHHHHHHHHhCcCceEEEEEecCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHhhc
Confidence                         23578899999988887621   1112222         11121   11                 0


Q ss_pred             ccc-ccCcceeccceEeccCcccchhhhccceeEEEEEeccc---CC-CCCCCcchhhhhchHHHHHHHHhhc
Q psy8322         440 VLK-FENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCC---RY-PAPSEIPIHWRSNQNALISWLQQVH  507 (651)
Q Consensus       440 ~~~-~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~---~~-p~~~~i~~~w~~nr~all~~~aqa~  507 (651)
                      +.. |..|.. ...||+++|+++||+|..+++++||+||+|.   +| ||+++|.+.|+|+++++..++.++.
T Consensus       327 g~~~Y~~g~~-~~~~Y~~~G~~~Dw~y~~~~~~~~T~EL~d~g~~gF~lP~~~I~p~~~E~~~~~~~~~~~~~  398 (401)
T 3dgv_A          327 RNIRYTHGSG-SESLYLAPGGSDDWIYDLGIKYSFTFELRDKGKYGFLLPESYIRPTCSEALVAVAKIASHVV  398 (401)
T ss_dssp             TTCCCEEEEG-GGSSSCCCSCHHHHHHTTTCCEEEEEEESCSSSSTTCCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCCccCCh-hhccccCCCcHHHHHhhcCCCEEEEEEecCCCCCCCCCChHHhhHHHHHHHHHHHHHHHHHH
Confidence            111 333433 3468999999999999999999999999975   35 8999999999999999999887653

>3prt_A Carboxypeptidase T; hydrolase; 1.66A {Thermoactinomyces vulgaris} PDB: 1obr_A 3qnv_A

Probab=99.92  E-value=4.4e-26  Score=240.05  Aligned_cols=230  Identities=23%  Similarity=0.282  Sum_probs=183.7

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..+++...|.    ++       |||+|++|+|++++.....||+|+++|+||||||+|++++++++++|+++|+. 
T Consensus        25 ~~p~~~~~~~iG~----S~-------eGR~i~~l~i~~~~~~~~~kp~v~i~~giHg~E~~g~~~~~~l~~~L~~~y~~-   92 (323)
T 3prt_A           25 NYPNIVKKFSIGK----SY-------EGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNYNL-   92 (323)
T ss_dssp             HCTTTEEEEEEEE----CT-------TSCEEEEEEECTTTTSCCSSCEEEEEECSSTTCTHHHHHHHHHHHHHHHTTTT-
T ss_pred             HCCCcEEEEecee----cc-------CCCceEEEEecCCCCCCCCCceEEEecccCcCccccHHHHHHHHHHHHHHhcC-
Confidence            4566777777787    88       99999999999876444579999999999999999999999999999999977 


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecc--cccCCCCCCC-----ceeEeeccCCCCCCCC-----------------
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEG--NCRSGRGRTP-----PFLISLFLPFPVTKNK-----------------  405 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~--~~~~~kgr~~-----~~gvdlnrnf~~~~~~-----------------  405 (651)
                      |+.+++||++++|+|||++||||++++++.  +|.|||+|.+     +.|||||||||+.|..                 
T Consensus        93 d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~r~wR~nr~~~~~~~~~GvDLNRnf~~~w~~~~g~s~~p~~~~y~G~~  172 (323)
T 3prt_A           93 DSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRS  172 (323)
T ss_dssp             SHHHHHHHTTCEEEEECCSCHHHHHHHHTTSSCCCCCSCSCCCTTCSCCCCCGGGCSSTTTTSSSSSBSCTTSTTBCCSS
T ss_pred             CHHHHHHHhCCeEEEEeeecCchheeeeccCCccccccCCCCCCCCcccccccccCCCcccCCCCCCCCCCCccccCCCC
Confidence            999999999999999999999999998864  6899999874     5799999999976542                 


Q ss_pred             CCCCCChHHHHHHHHHhh-------ccCCCCcCC---------CCCCCCc-----cc--cc---------cCc--ceecc
Q psy8322         406 PALTPDTDVFLHLASTYA-------RLHPTMHMK---------RPCPGNT-----VL--KF---------ENG--VTNGA  451 (651)
Q Consensus       406 ~~~~~~~~~f~~l~~~~a-------~~~~~~~~~---------~~~~~~~-----~~--~~---------~~g--i~n~~  451 (651)
                      ..++||++++..+..++.       .....+|..         ..|....     .+  .+         ..|  ..++.
T Consensus       173 ~~sepEt~a~~~~~~~~~~~~~~~~~~~idlHs~~~~~~ypy~~~~~~~~~~~~~~d~~~~~~la~~~~~~~gy~~~~~~  252 (323)
T 3prt_A          173 AFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYSYTYTDVPSDMTQDDFNVFKTMANTMAQTNGYTPQQGS  252 (323)
T ss_dssp             TTCSHHHHHHHHHHHHTEETTEECEEEEEEEEESSSEEEESCCSCSCSSCTTSCHHHHHHHHHHHHHHHHHHCCEEEEGG
T ss_pred             CCCcHHHHHHHHHHHHhhhccccCeEEEEEccCCCceEEecCCCCCCCCCCCCChHHHHHHHHHHHHHHHHcCCccCCcc
Confidence            457889999998877651       111122221         1121110     00  00         011  22345


Q ss_pred             ceEeccCcccchhhhccceeEEEEEec-----ccCCCCCCCcchhhhhchHHHHHHHHhhcccee
Q psy8322         452 AWYSFSGGMADYNYLYHGCLELTLEIS-----CCRYPAPSEIPIHWRSNQNALISWLQQVHRGVK  511 (651)
Q Consensus       452 ~~y~~sG~~~D~~y~~~~~~~~T~El~-----~~~~p~~~~i~~~w~~nr~all~~~aqa~~~i~  511 (651)
                      .||+++|+++||+|...++++||+||+     |+++||.++|+.+|++|+++++.++.+++..++
T Consensus       253 ~~Y~~~G~~~Dw~y~~~~~~~~T~El~~~~~~~gf~p~~~~i~~~~~e~~~~l~~~~~~~~~~~~  317 (323)
T 3prt_A          253 DLYIADGGMDDWAYGQHKIFAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKADCPYS  317 (323)
T ss_dssp             GTCCCCSCHHHHHHHHHCCEEEEEEESCSSTTTTTCCCGGGHHHHHHTTHHHHHHHHHHTSCGGG
T ss_pred             eeEecCCCHHHHHhhcCCeEEEEEEecCCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHhhchhh
Confidence            689999999999999889999999997     788899999999999999999999998876544

>3mn8_A LP15968P; catalytic domain of alpha/beta-hydrolase fold, C-terminal, A transthyretin-like domain, hydrolase; HET: NAG GEM; 2.70A {Drosophila melanogaster}

Probab=99.92  E-value=1e-25  Score=245.65  Aligned_cols=142  Identities=32%  Similarity=0.534  Sum_probs=127.1

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      +.+|..+++...|.    ++       |||+|++|+|++++ .+...||.|+++|+||||||+|++++++++++||.+|.
T Consensus        55 ~~~p~~~~~~~iG~----S~-------eGR~i~~l~is~~~~~~~~~kp~v~i~~giHg~E~~g~~~~l~l~~~L~~~y~  123 (435)
T 3mn8_A           55 KAYPNQAKVHFLGR----SL-------EGRNLLALQISRNTRSRNLLTPPVKYIANMHGDETVGRQLLVYMAQYLLGNHE  123 (435)
T ss_dssp             HHSTTTEEEEEEEE----CT-------TSCEEEEEEECSCTTSCCTTCCEEEEECCSSTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHCCCcEEEEEeeE----cc-------CCCEEEEEEEeCCCCccccCCCEEEEEecCCCCChhHHHHHHHHHHHHHHhcc
Confidence            36677788888887    88       99999999999876 45567999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCC---CCCCceeEeeccCCCCCCCC--------CCCCCChHHHH
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGR---GRTPPFLISLFLPFPVTKNK--------PALTPDTDVFL  416 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~k---gr~~~~gvdlnrnf~~~~~~--------~~~~~~~~~f~  416 (651)
                      + |+++++||++++|+|||++||||++++++++|.|++   +|.|+.|+|||||||+.|..        +.++||.+++.
T Consensus       124 ~-d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~r~~~~~~~~R~n~~GvDLNRnf~~~w~~~~~~~g~~~~sepEt~al~  202 (435)
T 3mn8_A          124 R-ISDLGQLVNSTDIYLVPTMNPDGYALSQEGNCESLPNYVGRGNAANIDLNRDFPDRLEQSHVHQLRAQSRQPETAALV  202 (435)
T ss_dssp             T-CHHHHHHHHHCEEEEESCSCHHHHHTSCTTCSSCCGGGTTTSCTTCCCGGGCSCCTTC--------CCCSCHHHHHHH
T ss_pred             C-CHHHHHhhhCeEEEEEeCcCCChhhhhccCccccCCCCCCCccccCCCcccCCCcccCcccccCCCCccchHHHHHHH
Confidence            6 899999999999999999999999999999999998   78899999999999987642        46788998888


Q ss_pred             HHHHHh
Q psy8322         417 HLASTY  422 (651)
Q Consensus       417 ~l~~~~  422 (651)
                      .+..++
T Consensus       203 ~~~~~~  208 (435)
T 3mn8_A          203 NWIVSK  208 (435)
T ss_dssp             HHHTTS
T ss_pred             HHHhhc
Confidence            877665

>1h8l_A Carboxypeptidase GP180 residues 503-882; hydrolase, zinc-dependent protease; HET: NAG BMA NDG GEM; 2.6A {Lophonetta specularioides} SCOP: b.3.2.1 c.56.5.1 PDB: 1qmu_A*

Probab=99.92  E-value=1.7e-25  Score=240.94  Aligned_cols=141  Identities=35%  Similarity=0.590  Sum_probs=124.9

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      .+|..+++...|.    +|       |||+|++|+|++++ .+..++|.|+++|++|||||+|++++++++++|+.+|+.
T Consensus        26 ~~p~~~~~~~iG~----S~-------eGr~i~~l~i~~~~~~~~~~~p~v~i~~giHg~E~~g~~~~~~l~~~L~~~y~~   94 (380)
T 1h8l_A           26 EYPSITRLYSVGK----SV-------ELRELYVMEISDNPGIHEAGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNFGT   94 (380)
T ss_dssp             HCTTTEEEEEEEE----CT-------TCCEEEEEEESSSTTCCCTTCCEEEEECCSSTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred             HCCCcEEEEECCc----CC-------CCCEEEEEEEcCCCccccCCCceEEEEcccCCCchhHHHHHHHHHHHHHHhhCC
Confidence            4566667777777    88       99999999999865 345679999999999999999999999999999999986


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCC--CCCCChHHHHHHHHHh
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKP--ALTPDTDVFLHLASTY  422 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~--~~~~~~~~f~~l~~~~  422 (651)
                       |++++.||++++|+|||++||||+++.++++|+|||+|.|+.|+|||||||..+...  .++||.+.+..+..++
T Consensus        95 -~~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~w~k~R~n~~GvDLNRnf~~~~~~~~~~sepEt~a~~~~~~~~  169 (380)
T 1h8l_A           95 -DPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQVTDPPQPETLAVMSWLKTY  169 (380)
T ss_dssp             -CHHHHHHHHHCEEEEESCSCHHHHHTCCTTCSSCCTTTSCTTSCCGGGCSCCSSSCCCSCCCHHHHHHHHHHHHS
T ss_pred             -CHHHHHHHhccEEEEEeccCCccceecccCCCCccCCCCCCCCCcccCCCcccccccCCCCChHHHHHHHHHHhC
Confidence             899999999999999999999999999999999999999999999999999887432  2578888888777664

>1dtd_A Carboxypeptidase A2; carboxypeptidase A2, leech carboxypeptidase inhibitor, hydrolase/hydrolase inhibitor complex; HET: GLU; 1.65A {Homo sapiens} SCOP: c.56.5.1

Probab=99.92  E-value=1.4e-25  Score=234.23  Aligned_cols=220  Identities=20%  Similarity=0.243  Sum_probs=174.9

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..++++..|.    ++       |||+|++|+|+++    ..||+|+++|+||||||+|++++++++++|+.+|++ 
T Consensus        22 ~~p~~~~~~~iG~----S~-------egr~i~~l~i~~~----~~~p~v~i~agiHg~E~~g~~~~~~l~~~L~~~y~~-   85 (303)
T 1dtd_A           22 EHPGLVSKVNIGS----SF-------ENRPMNVLKFSTG----GDKPAIWLDAGIHAREWVTQATALWTANKIVSDYGK-   85 (303)
T ss_dssp             HCTTTEEEEEEEE----CT-------TCCEEEEEEECCS----SSCCEEEEECCSSTTCHHHHHHHHHHHHHHHHHTTT-
T ss_pred             HCCCceEEEeCcc----cC-------CCCeEEEEEEeCC----CCCcEEEEEcccccCccccHHHHHHHHHHHHHHhcC-
Confidence            4565667777777    88       9999999999875    368999999999999999999999999999999976 


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC------CceeEeeccCCCCCCC----------------CCC
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT------PPFLISLFLPFPVTKN----------------KPA  407 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~------~~~gvdlnrnf~~~~~----------------~~~  407 (651)
                      |+.+++||++++|+|||++||||++++++++|+|||+|.      ++.|+|||||||..|.                ...
T Consensus        86 ~~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wr~~r~~~~~~~~~~GvDLNRnfp~~w~~~g~s~~p~~~~y~G~~~~  165 (303)
T 1dtd_A           86 DPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKVSAGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSAN  165 (303)
T ss_dssp             SHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTTCSCBCCCGGGCSSSSTTCTTCBSCTTSTTBCCSSTT
T ss_pred             CHHHHHHHhCCeEEEEecccCccceeeeccccccccCCCCCCCCCCCcCcccCCCCCCcCccCCCCCCCCccccCCCCCC
Confidence            899999999999999999999999999999999999986      6899999999997653                334


Q ss_pred             CCCChHHHHHHHHHhh--ccCCCCcCCC-----C----C---CCC-----------------ccccccCcceeccceEec
Q psy8322         408 LTPDTDVFLHLASTYA--RLHPTMHMKR-----P----C---PGN-----------------TVLKFENGVTNGAAWYSF  456 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a--~~~~~~~~~~-----~----~---~~~-----------------~~~~~~~gi~n~~~~y~~  456 (651)
                      ++||++.+..+..++.  ..+..+|...     +    |   .+.                 .+..+..|.. ...||++
T Consensus       166 sepEt~a~~~~~~~~~~~~~~idlHs~~~~~~~Py~~~~~~~~~~~~~~~la~~~a~a~~~~~g~~y~~g~~-~~~~y~~  244 (303)
T 1dtd_A          166 SEVEVKSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTKLDDFDELSEVAQKAAQSLSRLHGTKYKVGPI-CSVIYQA  244 (303)
T ss_dssp             CSHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSCCSCCTTHHHHHHHHHHHHHHHHHHHCCCCEEEEH-HHHTCCC
T ss_pred             CcHHHHHHHHHHHhCCCeEEEEEeeCCCCeEEeCCCCCCCCCCCHHHHHHHHHHHHHHhHHhcCCCCccCCc-ccccccC
Confidence            6778888888777661  1111222211     1    1   110                 0001111111 1258999


Q ss_pred             cCcccchhhhccceeEEEEEecccC----CCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         457 SGGMADYNYLYHGCLELTLEISCCR----YPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       457 sG~~~D~~y~~~~~~~~T~El~~~~----~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      +|+++||+|..++++++|+||+|++    .||+++|.++|++++++++.++.++
T Consensus       245 ~G~~~D~~~~~g~~~~~t~El~~~g~~gf~~p~~~i~~~~~e~~~~l~~~~~~~  298 (303)
T 1dtd_A          245 SGGSIDWSYDYGIKYSFAFELRDTGRYGFLLPARQILPTAEETWLGLKAIMEHV  298 (303)
T ss_dssp             TTCHHHHHHHHTCCEEEEEEESCSSSSTTCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHhhhcCCcEEEEEEecCCCCCCcCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999888899999999863    4888999999999999999988765

>1kwm_A Procarboxypeptidase B; hydrolase; HET: CIT; 1.60A {Homo sapiens} SCOP: c.56.5.1 d.58.3.1 PDB: 3glj_A 1nsa_A 1pba_A

Probab=99.91  E-value=3.1e-25  Score=239.84  Aligned_cols=221  Identities=17%  Similarity=0.155  Sum_probs=178.0

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..++++..|.    ++       |||+|++|+|+++   +.+||+|+++|+||||||+|++++++++++|+.+|.. 
T Consensus       120 ~~p~~v~~~~iG~----S~-------eGR~i~~l~i~~~---~~~kp~v~i~agiHg~E~~g~~~~~~li~~L~~~y~~-  184 (402)
T 1kwm_A          120 ENPALISRSVIGT----TF-------EGRAIYLLKVGKA---GQNKPAIFMDCGFHAREWISPAFCQWFVREAVRTYGR-  184 (402)
T ss_dssp             HCTTTEEEEEEEE----CT-------TSCEEEEEEESCC---CTTCCEEEEECCSSTTCTHHHHHHHHHHHHHHHHTTT-
T ss_pred             HCCCcEEEEEccc----CC-------CCCceEEEEeCCC---CCCCceEEEecCCCCCccchHHHHHHHHHHHHHHhcC-
Confidence            5676788888887    88       9999999999864   2479999999999999999999999999999999986 


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC----------------CCCC
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN----------------KPAL  408 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~----------------~~~~  408 (651)
                      |+.++.||++++|+|||++||||+++++.++|+|||+|.     ++.|+|||||||+.|.                ...+
T Consensus       185 d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~~~~GvDLNRnf~~~w~~~g~s~~pc~~~y~G~~~~s  264 (402)
T 1kwm_A          185 EIQVTELLNKLDFYVLPVLNIDGYIYTWTKSRFWRKTRSTHTGSSCIGTDPNRNFDAGWCEIGASRNPCDETYCGPAAES  264 (402)
T ss_dssp             SHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCSSCCCCCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTC
T ss_pred             CHHHHHHHhCCeEEEEeeeCCcchhhcccccceeeccCCCCCCCCCcCcccccCCccccCCCCCCCCCCccccCCCCCCC
Confidence            899999999999999999999999999999999999996     5899999999997653                3457


Q ss_pred             CCChHHHHHHHHHhh---ccCCCCcCC---------CCCCCCc--------------------cccccCcceeccceEec
Q psy8322         409 TPDTDVFLHLASTYA---RLHPTMHMK---------RPCPGNT--------------------VLKFENGVTNGAAWYSF  456 (651)
Q Consensus       409 ~~~~~~f~~l~~~~a---~~~~~~~~~---------~~~~~~~--------------------~~~~~~gi~n~~~~y~~  456 (651)
                      +||++++..+..++.   .....+|..         ..|....                    +..+..|.. ...||++
T Consensus       265 epEt~al~~~~~~~~~~~~~~idlHs~~~~~~~Py~~~~~~~~~~~~~~~la~~~a~a~~~~~g~~y~~g~~-~~~~y~~  343 (402)
T 1kwm_A          265 EKETKALADFIRNKLSSIKAYLTIHSYSQMMIYPYSYAYKLGENNAELNALAKATVKELASLHGTKYTYGPG-ATTIYPA  343 (402)
T ss_dssp             SHHHHHHHHHHHHTTTTEEEEEEEEESSCEEEESCSSSSCCCTTHHHHHHHHHHHHHHHHHHHCCCCEEEEH-HHHTCCC
T ss_pred             cHHHHHHHHHHHhhccCeeEEEEEeCCCCEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCccCCc-cceeeec
Confidence            788989888887762   111112211         1111100                    001111111 1248999


Q ss_pred             cCcccchhhhccceeEEEEEecccC----CCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         457 SGGMADYNYLYHGCLELTLEISCCR----YPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       457 sG~~~D~~y~~~~~~~~T~El~~~~----~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      +|+++||+|..+++++||+||+|++    .||.++|.++|++++++++.++.++
T Consensus       344 ~G~~~Dw~y~~~~~~s~T~El~~~g~~Gf~lp~~~i~~~~~e~~~~l~~~~~~~  397 (402)
T 1kwm_A          344 AGGSDDWAYDQGIRYSFTFELRDTGRYGFLLPESQIRATCEETFLAIKYVASYV  397 (402)
T ss_dssp             SCCHHHHHHHTTCSEEEEEEESCSSSSGGGCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHhhcCCcEEEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999876    4889999999999999999998765

>1z5r_A Procarboxypeptidase B; exopeptidase, hydrolase; 1.40A {Sus scrofa} SCOP: c.56.5.1 PDB: 1zg7_A* 1zg8_A* 1zg9_A* 2jew_A* 2piy_A* 2piz_A* 2pj0_A* 2pj1_A* 2pj2_A* 2pj3_A* 2pj4_A* 2pj5_A* 2pj6_A* 2pj7_A* 2pj8_A* 2pj9_A* 2pja_A* 2pjb_A* 2pjc_A* 1zli_A ...

Probab=99.91  E-value=4e-25  Score=231.22  Aligned_cols=222  Identities=16%  Similarity=0.141  Sum_probs=176.6

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..++++..|.    ++       |||+|++|+|+++.   ..+|+|+++|+||||||+|++++++++++|+.+|.. 
T Consensus        25 ~~p~~~~~~~iG~----S~-------eGr~i~~l~i~~~~---~~~p~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~-   89 (306)
T 1z5r_A           25 ENPDLISRTAIGT----TF-------LGNNIYLLKVGKPG---PNKPAIFMDCGFHAREWISHAFCQWFVREAVLTYGY-   89 (306)
T ss_dssp             HCTTTEEEEEEEE----CT-------TSCEEEEEEESCCC---SSCCEEEEECCSSTTCHHHHHHHHHHHHHHHHHTTT-
T ss_pred             HCCCceEEEeccc----cC-------CCCeeEEEEeCCCC---CCCceEEEEecccccchhhHHHHHHHHHHHHHhhcc-
Confidence            4565677777777    88       99999999998652   468999999999999999999999999999999986 


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCCC----------------CCCC
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTKN----------------KPAL  408 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~~----------------~~~~  408 (651)
                      |+.+++||++++|+|||++||||+++.++++|+|||+|.     ++.|+|||||||..|.                ...+
T Consensus        90 d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wrk~r~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~~~s  169 (306)
T 1z5r_A           90 ESHMTEFLNKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAES  169 (306)
T ss_dssp             SHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTSSCBCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTC
T ss_pred             CHHHHHHHhcCcEEEEeeeCCchhhheeccccccccCCCCCCCCCccCCccCCCCCCCCCCCCCCCCCCccccCCCCCCC
Confidence            899999999999999999999999999999999999985     6899999999997653                3357


Q ss_pred             CCChHHHHHHHHHhh---ccCCCCcCC---------CCCCCCc--------------------cccccCcceeccceEec
Q psy8322         409 TPDTDVFLHLASTYA---RLHPTMHMK---------RPCPGNT--------------------VLKFENGVTNGAAWYSF  456 (651)
Q Consensus       409 ~~~~~~f~~l~~~~a---~~~~~~~~~---------~~~~~~~--------------------~~~~~~gi~n~~~~y~~  456 (651)
                      +||++.+..+..++.   ..+..+|..         ..|....                    +..+..|.. ...||++
T Consensus       170 epEt~a~~~~~~~~~~~~~~~idlHs~~~~~~~Py~~~~~~~~~~~~~~~la~~~a~a~~~~~g~~y~~~~~-~~~~y~~  248 (306)
T 1z5r_A          170 EKETKALADFIRNNLSSIKAYLTIHSYSQMILYPYSYDYKLPENNAELNNLAKAAVKELATLYGTKYTYGPG-ATTIYPA  248 (306)
T ss_dssp             SHHHHHHHHHHHHTTTTEEEEEEEEESSSEEEESCSSSSCCCTTHHHHHHHHHHHHHHHHHHHCCCCEEEEH-HHHTCCC
T ss_pred             cHHHHHHHHHHHHhccCeEEEEEEeCCCCeEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCccCCc-cCeeecc
Confidence            788888888877661   111122221         1111000                    001111111 1247999


Q ss_pred             cCcccchhhhccceeEEEEEecccC---C-CCCCCcchhhhhchHHHHHHHHhhc
Q psy8322         457 SGGMADYNYLYHGCLELTLEISCCR---Y-PAPSEIPIHWRSNQNALISWLQQVH  507 (651)
Q Consensus       457 sG~~~D~~y~~~~~~~~T~El~~~~---~-p~~~~i~~~w~~nr~all~~~aqa~  507 (651)
                      +|+++||+|..++++++|+||+|++   | ||.++|..+|++|+++++.++.++.
T Consensus       249 ~G~~~D~~~~~~~~~~~T~El~~~~~~gf~~p~~~i~~~~~e~~~~l~~~~~~~~  303 (306)
T 1z5r_A          249 AGGSDDWAYDQGIKYSFTFELRDKGRYGFILPESQIQATCEETMLAIKYVTNYVL  303 (306)
T ss_dssp             SSCHHHHHHHTTCSEEEEEEESCSSSSTTSCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHHhCCCCEEEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999999876   4 7889999999999999999987754

>3d4u_A Tafia, carboxypeptidase B2; protease-inhibitor complex, glycoprotein, hydrolase, metal-binding, metalloprotease, protease, secret zymogen; 1.70A {Bos taurus} PDB: 3lms_A

Probab=99.91  E-value=5.2e-25  Score=230.69  Aligned_cols=223  Identities=18%  Similarity=0.168  Sum_probs=169.6

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..++++..|.    ++       |||+|++|+|++++  ..++|+|+++|+||||||+|++++++++++|+.+|.. 
T Consensus        25 ~~p~~~~~~~iG~----S~-------eGr~i~~l~i~~~~--~~~~p~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~~-   90 (309)
T 3d4u_A           25 RYPDMVEKIHIGS----SY-------EKYPLYVLKVSKKE--QRAKNAMWIDCGIHAREWISPAFCLWFVGSVTYYYGK-   90 (309)
T ss_dssp             HSTTTEEEEEEEE----CT-------TCCEEEEEEECCC-------CEEEEECCSSTTCTHHHHHHHHHHHHHHHSTTC-
T ss_pred             HCCCceEEEeccc----cC-------CCCeeEEEEeCCCC--CCCCceEEEEeccCCcchhhHHHHHHHHHHHHHhhcc-
Confidence            4565677777777    88       99999999998743  3578999999999999999999999999999999976 


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCC-CCCC----------------CC
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPV-TKNK----------------PA  407 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~-~~~~----------------~~  407 (651)
                      |+.+++||++++|+|||++||||+++.+.++|+||++|.     ++.|+|||||||. .|..                +.
T Consensus        91 d~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wr~~R~~~~~~~~~GvDLNRnf~~~~w~~~g~s~~p~~~~y~G~~~~  170 (309)
T 3d4u_A           91 EKMHTNLLKHMDFYIMPVVNVDGYDYTWKKDRMWRKNRSLHEKNACVGTDLNRNFASKHWCGEGASSSSCSEIYCGTYPE  170 (309)
T ss_dssp             -----CCSTTCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCTTCSSCCCCGGGCSCCTTTTSTTSBSCTTSTTBCCSSTT
T ss_pred             CHHHHHHHhcCeEEEEeeeccchhheeecccceeecCCCCCCCCCCcCccccCCCChhhcCCCCCCCCCCccccCCCCCC
Confidence            899999999999999999999999999999999999997     4899999999998 6532                24


Q ss_pred             CCCChHHHHHHHHHhh---ccCCCCcCC---------CCCC---CC---------c--------ccc-ccCcceeccceE
Q psy8322         408 LTPDTDVFLHLASTYA---RLHPTMHMK---------RPCP---GN---------T--------VLK-FENGVTNGAAWY  454 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a---~~~~~~~~~---------~~~~---~~---------~--------~~~-~~~gi~n~~~~y  454 (651)
                      ++||++.+..+..++.   ..+..+|..         ..|.   +.         .        +.. |..|.. ...||
T Consensus       171 sepEt~a~~~~~~~~~~~~~~~idlH~~~~~~~~Py~~~~~~~~~~~~~~~la~~~a~a~~~~~g~~~y~~g~~-~~~~y  249 (309)
T 3d4u_A          171 SEPEVKAVADFLRRNIKHIKAYISMHSYSQKIVFPYSYSRSRSKDHEELSLVAREAVFAMENIHRNIRYTHGSG-SESLY  249 (309)
T ss_dssp             CSHHHHHHHHHHHHTTTTEEEEEEEEESSSEEEESCSSCSSCCTTHHHHHHHHHHHHHHHHHHSTTCCCEEEEH-HHHTC
T ss_pred             CcHHHHHHHHHHHhcccceEEEEEEeCCCcEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHhccCCcceeecCc-cCeee
Confidence            6788888888877662   111122221         1111   10         0        001 111211 12389


Q ss_pred             eccCcccchhhhccceeEEEEEecccC---C-CCCCCcchhhhhchHHHHHHHHhhc
Q psy8322         455 SFSGGMADYNYLYHGCLELTLEISCCR---Y-PAPSEIPIHWRSNQNALISWLQQVH  507 (651)
Q Consensus       455 ~~sG~~~D~~y~~~~~~~~T~El~~~~---~-p~~~~i~~~w~~nr~all~~~aqa~  507 (651)
                      +++|+++||+|..++++++|+||+|++   | ||.++|.++|++++++++.++.++.
T Consensus       250 ~~~G~~~D~~~~~~~~~~~T~El~~~~~~gf~~p~~~i~~~~~e~~~~l~~~~~~~~  306 (309)
T 3d4u_A          250 LAPGGSDDWIYDLGIKYSFTFELRDKGKYGFLLPESYIRPTCSEALVAVAKIASHVV  306 (309)
T ss_dssp             CCCSCHHHHHHHHTCSEEEEEEESCSSSSTTCCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             ecCCCHHHHHHhCCCcEEEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999876   5 8899999999999999999887653

>1uwy_A Carboxypeptidase M; metallopeptidase, GPI-anchor, metalloprotease, zinc, lipoprotein, hydrolase, structural proteomics in europe, spine; HET: NAG; 3.0A {Homo sapiens} SCOP: b.3.2.1 c.56.5.1

Probab=99.90  E-value=1.1e-24  Score=237.50  Aligned_cols=141  Identities=33%  Similarity=0.552  Sum_probs=126.1

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      .+|..++++..|.    +|       |||+|++++|++++ .+..++|.|+++|++|||||+|++++++++++|+.+|+.
T Consensus        21 ~~p~~~~~~~iG~----S~-------eGr~i~~l~i~~~~~~~~~~~p~v~i~agiHg~E~~g~~~~~~l~~~L~~~y~~   89 (426)
T 1uwy_A           21 NYSSVTHLHSIGK----SV-------KGRNLWVLVVGRFPKEHRIGIPEFKYVANMHGDETVGRELLLHLIDYLVTSDGK   89 (426)
T ss_dssp             HTTTSEEEEEEEE----CT-------TSCEEEEEEESSSTTSCBTTBCEEEEEECCSTTCCHHHHHHHHHHHHHHHHTTT
T ss_pred             HCCCcEEEEEccc----cC-------CCCEEEEEEEcCCCccccCCCceEEEecccCCCChhHHHHHHHHHHHHHHhhcC
Confidence            5566677777777    88       99999999999865 344679999999999999999999999999999999987


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCC--CCCCCChHHHHHHHHHh
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNK--PALTPDTDVFLHLASTY  422 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~--~~~~~~~~~f~~l~~~~  422 (651)
                       |++++.||++++|+|||++||||++++++++|.||++|.|+.|+|||||||..|..  ..++||.+.+..+..++
T Consensus        90 -d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~w~~~R~n~~GvDLNRnf~~~w~~~~~~sepEt~al~~~~~~~  164 (426)
T 1uwy_A           90 -DPEITNLINSTRIHIMPSMNPDGFEAVKKPDCYYSIGRENYNQYDLNRNFPDAFEYNNVSRQPETVAVMKWLKTE  164 (426)
T ss_dssp             -SHHHHHHHHHCEEEEESCSCHHHHHHCSSCCSSCCSCSSCTTSCCTTSCSCCSSSCCCCCCCHHHHHHHHHHHHS
T ss_pred             -CHHHHHHhcCcEEEEEEeeccchhheeeccCcccCCCCCCCcCCCCCCCCCCCCCcCCccccHHHHHHHHHHhcc
Confidence             99999999999999999999999999999999999999999999999999987643  35688888888887765

>2c1c_A Carboxypeptidase B; insect, metalloprotease, insensitive, plant inhibitors, hydrolase; 2.3A {Helicoverpa zea} SCOP: c.56.5.1

Probab=99.89  E-value=4.3e-24  Score=223.99  Aligned_cols=221  Identities=20%  Similarity=0.162  Sum_probs=173.0

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..++++..|.    ++       |||+|++|+|+++..+...||+|+++|+||||||+|++++++++++|+.+|.  
T Consensus        22 ~~p~~~~~~~iG~----S~-------eGr~i~~l~i~~~~~~~~~~p~v~i~agiHg~E~~g~~~~~~l~~~L~~~~~--   88 (312)
T 2c1c_A           22 KYPDVATVVNAAE----SF-------EGRPIKYIKISTTNFEDENKPVIFIDGGIHAREWISPPSVTWAIHKLVEDVT--   88 (312)
T ss_dssp             HCTTTEEEEEEEE----CT-------TSCEEEEEEECTTTTCCTTSCEEEEEECSSTTCTTHHHHHHHHHHHHHTSCC--
T ss_pred             HCCCceEEEeccc----CC-------CCCeEEEEEecCCCccCCCCCEEEEEeccCCCccccHHHHHHHHHHHHHhcc--
Confidence            3555667777777    88       9999999999976544567999999999999999999999999999999885  


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC--------CceeEeeccCCCCCCC----------------C
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT--------PPFLISLFLPFPVTKN----------------K  405 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~--------~~~gvdlnrnf~~~~~----------------~  405 (651)
                      |   .+||++++|+|||++||||++++++++|+|||+|.        ++.|+|||||||+.|.                .
T Consensus        89 ~---~~ll~~~~~~ivP~~NPDG~~~~~~~~~~wr~~R~~~~~~~~~~~~GvDLNRnf~~~w~~~g~s~~p~~~~y~G~~  165 (312)
T 2c1c_A           89 E---NDLLEKFDWILLPVVNPDGYKYTFTNERFWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTS  165 (312)
T ss_dssp             C---THHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCSSGGGGTSCCCCGGGCSSSSTTSSSCBSCTTSTTBCCSS
T ss_pred             c---HHHHhcCcEEEEecccCccceeeecccccccccCCCCCCCccccccCCCcccCCCcCCCCCCCCCCCCccccCCCC
Confidence            3   47999999999999999999999999999999995        4899999999996653                2


Q ss_pred             CCCCCChHHHHHHHHHhh---ccCCCCcCC---------CCCCCCc-----------------------cccccCcceec
Q psy8322         406 PALTPDTDVFLHLASTYA---RLHPTMHMK---------RPCPGNT-----------------------VLKFENGVTNG  450 (651)
Q Consensus       406 ~~~~~~~~~f~~l~~~~a---~~~~~~~~~---------~~~~~~~-----------------------~~~~~~gi~n~  450 (651)
                      ..++||++++..+..++.   ..+..+|..         ..|....                       ...+..|. ..
T Consensus       166 ~~sepEt~al~~~~~~~~~~~~~~idlHs~~~~~~~P~~~~~~~~~~~~~~~~la~~~a~a~~~~~~~~g~~y~~g~-~~  244 (312)
T 2c1c_A          166 AFSEVETRVVRDILHEHLARMALYLTMHSFGSMILYPWGHDGSLSQNALGLHTVGVAMASVIQSNALPNFPPYTVGN-SA  244 (312)
T ss_dssp             TTCSHHHHHHHHHHHHHGGGEEEEEEEEESSSEEEESCTTTCCCCTTHHHHHHHHHHHHHHHHTTSCTTSCCCEEEE-HH
T ss_pred             CCCCHHHHHHHHHHHhccCCeeEEEEEecCCCeEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCceeeec-cc
Confidence            456788888888877662   111112211         1111100                       00011111 12


Q ss_pred             cce-EeccCcccchhhhccceeEEEEEeccc------CCCCCCCcchhhhhchHHHHHHHHhhc
Q psy8322         451 AAW-YSFSGGMADYNYLYHGCLELTLEISCC------RYPAPSEIPIHWRSNQNALISWLQQVH  507 (651)
Q Consensus       451 ~~~-y~~sG~~~D~~y~~~~~~~~T~El~~~------~~p~~~~i~~~w~~nr~all~~~aqa~  507 (651)
                      ..| |+++|+++||+|..++++++|+||+||      ++||+++|.++|++|+++++.++.++.
T Consensus       245 ~~~~y~~~G~~~D~~~~~~~~~~~T~El~~~~~g~~gf~~p~~~i~~~~~e~~~~l~~~~~~~~  308 (312)
T 2c1c_A          245 LVIGYYIAGSSEDYAHSIGVPLSYTYELPGLSSGWDGFHLPPQYIEQVCRETWEGIVVGARRAG  308 (312)
T ss_dssp             HHHSSCCSSCHHHHHHHTTCSEEEEEEECCSSSSGGGGSCCGGGHHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeecCCcCHHHHHhhcCCCEEEEEEecCCCCCCCCccCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            357 999999999999999999999999994      668999999999999999999987653

>2nsm_A Carboxypeptidase N catalytic chain; caroxypeptidase, zinc peptidase, transthyretin-like domain, processing, peptide modification, hydrolase; HET: NAG; 2.10A {Homo sapiens}

Probab=99.89  E-value=3.9e-24  Score=234.31  Aligned_cols=142  Identities=34%  Similarity=0.567  Sum_probs=122.5

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      .+|..++++..|.    +|       |||+|++|+|++++ .+..+||.|+++|+||||||+|++++++++++|+.+|..
T Consensus        22 ~~p~~~~~~~iG~----S~-------eGR~i~~l~i~~~~~~~~~~kp~v~i~~giHg~E~~g~~~~~~l~~~L~~~y~~   90 (439)
T 2nsm_A           22 ECPGITRVYSIGR----SV-------EGRHLYVLEFSDHPGIHEPLEPEVKYVGNMHGNEALGRELMLQLSEFLCEEFRN   90 (439)
T ss_dssp             HSGGGEEEEEEEE----CT-------TSCEEEEEEECSSTTSCCTTCCEEEEEECSSTTCCHHHHHHHHHHHHHHHHHHH
T ss_pred             HCCCceEEEecCc----cC-------CCCEEEEEEECCCCCccccCCceEEEecccCCCcHHHHHHHHHHHHHHHHhhcc
Confidence            5566677777777    88       99999999999876 455689999999999999999999999999999999987


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeec---ccccCCCCCCCceeEeeccCCCCC----C------CC----C-----
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVE---GNCRSGRGRTPPFLISLFLPFPVT----K------NK----P-----  406 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~---~~~~~~kgr~~~~gvdlnrnf~~~----~------~~----~-----  406 (651)
                      +|+.++.||++++|+|||++||||+++++.   .+|+||++|.|+.|+|||||||+.    |      +.    +     
T Consensus        91 ~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~~~~wr~~R~n~~GvDLNRnf~~~~~~~w~~~~~g~~~~~~p~~~~y  170 (439)
T 2nsm_A           91 RNQRIVQLIQDTRIHILPSMNPDGYEVAAAQGPNKPGYLVGRNNANGVDLNRNFPDLNTYIYYNEKYGGPNHHLPLPDNW  170 (439)
T ss_dssp             TCHHHHHHHHHCEEEEESCSCHHHHHHHHHTTTTCCTTTTTCSCTTSCCGGGCSCCCHHHHHHHHHHCCCCSCCCCCTTH
T ss_pred             CCHHHHHHHhCceEEEEeCcCCChHHhhcccCCccCcccCCccCCCCCcccccCcccchhhccccccCCcccCCCCcccc
Confidence            799999999999999999999999999754   589999999999999999999971    1      10    0     


Q ss_pred             --CCCCChHHHHHHHHHh
Q psy8322         407 --ALTPDTDVFLHLASTY  422 (651)
Q Consensus       407 --~~~~~~~~f~~l~~~~  422 (651)
                        .++||.+++..+..++
T Consensus       171 ~g~sepEt~al~~~~~~~  188 (439)
T 2nsm_A          171 KSQVEPETRAVIRWMHSF  188 (439)
T ss_dssp             HHHSCHHHHHHHHHHHHS
T ss_pred             CCCCCHHHHHHHHHHHhC
Confidence              1577888888887765

>1jqg_A Carboxypeptidase A; Pro-protein, hydrolase; 2.50A {Helicoverpa armigera} SCOP: c.56.5.1 d.58.3.1

Probab=99.89  E-value=6.2e-24  Score=231.50  Aligned_cols=221  Identities=19%  Similarity=0.190  Sum_probs=175.0

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..++.+..|.    +|       |||+|++|+||++..+..+||+|+++||||||||+|++++++++++|+.+|.  
T Consensus       137 ~~p~~v~~~~iG~----S~-------eGR~i~~l~i~~~~~~~~~kp~v~i~agiHg~E~~g~~~~~~li~~L~~~~~--  203 (433)
T 1jqg_A          137 EFPNVVTVVEGGK----SF-------EGRSIKYLRISTTNFQDASKPVVMMQSLLHCREWVTLPATLYAIHKLVIDVT--  203 (433)
T ss_dssp             HCTTTEEEEEEEE----CT-------TCCEEEEEEECTTTTCCTTSCEEEEEECSSTTCTTHHHHHHHHHHHHHTSCC--
T ss_pred             HCCCcEEEEeceE----CC-------CCCeEEEEEecCCCCCCCCCCEEEEecCcCCCchhhHHHHHHHHHHHHhccc--
Confidence            5677788888887    88       9999999999976444467999999999999999999999999999999885  


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-------ceeEeeccCCCCCCC---------------CCC
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-------PFLISLFLPFPVTKN---------------KPA  407 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-------~~gvdlnrnf~~~~~---------------~~~  407 (651)
                      +   ..||++++|+|||++||||++++++++|+|||+|.+       +.|+|||||||+.|.               ...
T Consensus       204 ~---~~ll~~~~i~ivP~~NPDG~~~~~~~~r~wrk~R~~~~~~~~~~~GvDLNRnf~~~w~~~Gs~~pc~e~y~G~~~~  280 (433)
T 1jqg_A          204 E---SDLINNIDWIILPVANPDGYVHTFGGDRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSAF  280 (433)
T ss_dssp             C---THHHHSCEEEEESCSCHHHHHHHHSSCTTCCSCCCCSSSGGGSSCCCCGGGCSSTTTTSSSBCCTTSTTBCCSSTT
T ss_pred             c---HHHHhcceEEEEeeecCccchhcccCccccccCCCCCCCCCCCCcCcccccCCccccCCCCCCCCcccccCCCCCC
Confidence            3   488999999999999999999999999999999985       899999999997653               245


Q ss_pred             CCCChHHHHHHHHHhh---ccCCCCcCC--------CCCCCC--c---------------------cccccCcceeccce
Q psy8322         408 LTPDTDVFLHLASTYA---RLHPTMHMK--------RPCPGN--T---------------------VLKFENGVTNGAAW  453 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a---~~~~~~~~~--------~~~~~~--~---------------------~~~~~~gi~n~~~~  453 (651)
                      ++||++.+..+..++.   ..+..+|..        +.|...  .                     +..|..|.. ...|
T Consensus       281 sepEt~al~~~~~~~~~~~~~~idlHs~~~~~~~Py~~~~~~~d~~~~~~la~~~a~a~~~~~~~~g~~Y~~g~~-~~~~  359 (433)
T 1jqg_A          281 SEPESSVIRDIIAEHRNRMALYLDIHSFGSMILYGYGNGVLPSNALQLHLIGVQMAQAIDRVKWSSNKDYIVGNI-FHVL  359 (433)
T ss_dssp             CSHHHHHHHHHHHHTTTTEEEEEEEEESSSEEEESCTTSCCCTTHHHHHHHHHHHHHHHHTTCCTTSCCCEEEEH-HHHS
T ss_pred             ccHHHHHHHHHHHHhcCCeEEEEEEcCCCCEEEeCCCCCCCCCCHHHHHHHHHHHHHHHHHhccCCCCCceeCCc-ccee
Confidence            7788888888877661   111112211        122100  0                     011111111 1248


Q ss_pred             EeccCcccchhhhccceeEEEEEeccc--------CCCCCCCcchhhhhchHHHHHHHHhhc
Q psy8322         454 YSFSGGMADYNYLYHGCLELTLEISCC--------RYPAPSEIPIHWRSNQNALISWLQQVH  507 (651)
Q Consensus       454 y~~sG~~~D~~y~~~~~~~~T~El~~~--------~~p~~~~i~~~w~~nr~all~~~aqa~  507 (651)
                      |+++|+++||+|..+++++||+||+|+        ++||+++|.++|++++++++.++.++.
T Consensus       360 Y~~~G~~~D~~y~~~~~~s~T~El~~~~~~~g~~gf~lp~~~i~~~~~e~~~~l~~~~~~~~  421 (433)
T 1jqg_A          360 YAASGGASDYAMQAAAPFSYTYELPAYRNSVWFDGFLVDPDFIEQAGFETWEGIKVGARAAA  421 (433)
T ss_dssp             CCCCSCHHHHHHHHTCSEEEEEEECCCCCSSCCSSSCCCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             EECCcCHHHHHhhcCCcEEEEEEecCCcCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            999999999999999999999999983        568899999999999999999987764

>2qvp_A Uncharacterized protein; putative metallopeptidase, structural genomics, joint center structural genomics, JCSG; HET: MSE; 2.00A {Shewanella amazonensis}

Probab=99.88  E-value=1.2e-23  Score=216.73  Aligned_cols=199  Identities=16%  Similarity=0.201  Sum_probs=142.6

Q ss_pred             CCCeE-EEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         270 SVPFV-MSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       270 ~~p~~-~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      .+|.. ++++..|.    ++        ||+|++++++++   ..++|.|+++||+|||||+|++++++++++|+     
T Consensus        34 ~~p~~~~~~~~iG~----S~--------grpl~~~~~~~~---~~~~p~v~i~~giHg~E~~g~~~~~~l~~~l~-----   93 (275)
T 2qvp_A           34 ETERLGLGSKILGQ----AG--------HHPLYLLQSPGQ---KAGLPNLLISAGFHGEESAGPWGLLHFLSQLD-----   93 (275)
T ss_dssp             HHHHHTCEEEEEEE----ET--------TEEEEEEECSSC---CTTSCEEEEEECSSTTCTHHHHHHHHHHHHCC-----
T ss_pred             HCCCCceEEEEecc----cC--------CceeEEEECCCC---CCCCcEEEEEccCCCCcHHHHHHHHHHHHHHH-----
Confidence            34544 56666665    33        899999887543   34789999999999999999999999999986     


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCC----CCCCCCChHHHHHHHHHh--
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKN----KPALTPDTDVFLHLASTY--  422 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~----~~~~~~~~~~f~~l~~~~--  422 (651)
                           +.+|++.+|+|||++||||+++.+         |.++.|+|||||||+.+.    ...++||...+..+...+  
T Consensus        94 -----~~~l~~~~~~ivP~~NPdG~~~~~---------R~n~~g~DlNR~f~~~~~~~~~~~~~~pE~~a~~~~~~~~~~  159 (275)
T 2qvp_A           94 -----GELFKRVNLSVLPLVNPTGFAKGH---------RFNELGENPNRGFFIENGKAKPGADTSAEGRILLEHAHLLQV  159 (275)
T ss_dssp             -----SGGGGTCEEEEECCSCHHHHHHTC---------SSCTTSCCTTSCCEEETTEEECCTTCCHHHHHHHHTHHHHHH
T ss_pred             -----HHHhcCCeEEEEECcChHHhhccc---------ccCCCCccCCCCCCcccccCCCCCCCcHHHHHHHHHHHHhcc
Confidence                 357899999999999999999875         567889999999996543    233577887777764332  


Q ss_pred             --h----ccCCCCc--C------CCCCCCC-ccc-------c--------ccCc--ceeccceEeccCcccchhhhccce
Q psy8322         423 --A----RLHPTMH--M------KRPCPGN-TVL-------K--------FENG--VTNGAAWYSFSGGMADYNYLYHGC  470 (651)
Q Consensus       423 --a----~~~~~~~--~------~~~~~~~-~~~-------~--------~~~g--i~n~~~~y~~sG~~~D~~y~~~~~  470 (651)
                        .    +-|....  .      ...+... ...       .        ...|  ...|..+|+++|+++||+|..+++
T Consensus       160 ~~~~~~idlHs~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~g~~~y~~~g~~~d~~~~~~~~  239 (275)
T 2qvp_A          160 ASRDGILTCHEDVLMTDTYVYTFEPSQAPGRFSHSLRDALGQYFPIAADGDVDNCPVRSGVIFNHFDTSFESFLVRSGAR  239 (275)
T ss_dssp             HTTTCEEEEEEETTCSSBEEEEECSSSSCCHHHHHHHHHHHTTSCBCCSEEETTEEEBTTEEESCCSSSHHHHHHHTTCS
T ss_pred             CCceEEEEecCCCCCCCeEEecCCCCCChHHHhHHHHHHHHhhCcccccCCcCCCCccCceEecCCCCchhccccccCCc
Confidence              1    2222110  0      0011100 000       0        0001  112445799999999999999999


Q ss_pred             eEEEEEecccCCCCCCCcchhhhhchHHHHHHHHhhc
Q psy8322         471 LELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQVH  507 (651)
Q Consensus       471 ~~~T~El~~~~~p~~~~i~~~w~~nr~all~~~aqa~  507 (651)
                      +++|+||     |....++..|+.|+.++..++....
T Consensus       240 ~~~T~El-----p~~~~~~~~~~~~~~al~~~L~~~~  271 (275)
T 2qvp_A          240 VGCCSET-----PGQQPLDQRILANAAAMNTFVNMLA  271 (275)
T ss_dssp             SEEEEEE-----ETTSCHHHHHHHHHHHHHHHHHHHS
T ss_pred             EEEEEeC-----CCCcchHHHHHHHHHHHHHHHHHHH
Confidence            9999999     5677789999999999998877543

>3k2k_A Putative carboxypeptidase; structural genomics, joint center structural genomics, JCSG, protein structure initiative; 2.49A {Burkholderia mallei atcc 23344}

Probab=99.85  E-value=1.4e-21  Score=210.08  Aligned_cols=130  Identities=23%  Similarity=0.253  Sum_probs=108.9

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHH--hhc
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVV--EYI  347 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~--~y~  347 (651)
                      ..| .++.+..|.    ++       |||+|++|+|+.+..+..+||.|++.|++||+||+|++++++++++|+.  +|+
T Consensus       147 ~~p-~v~~~~iG~----S~-------eGR~I~~l~I~~~~~~~~~kp~V~i~agiHg~E~~g~~~~~~ll~~L~~~~~y~  214 (403)
T 3k2k_A          147 QMP-QASVVELGR----TV-------EGRPMSLVVLGTPDEAGAAKKKVWIIARQHPGESMAEWFIEGLVKRLVGWGDWS  214 (403)
T ss_dssp             TST-TEEEEEEEE----CT-------TSCEEEEEEECCCC----CCEEEEEEECSSTTCTHHHHHHHHHHHHHTTCGGGT
T ss_pred             hCC-CeEEEEecc----CC-------CCCEEEEEEEeCCCCcCCCCCEEEEEeccCCCCccHHHHHHHHHHHHHhccccc
Confidence            345 467777777    88       9999999999975433447999999999999999999999999999998  886


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      . |+.++.||++++|+|||++||||+++.+        .|.++.|+|||||||..  ...++||...+..+..++
T Consensus       215 ~-d~~~~~Ll~~~~~~ivP~lNPDG~~~~~--------~R~n~~GvDLNRnf~~~--~~~sepEt~al~~~~~~~  278 (403)
T 3k2k_A          215 G-DPVARKLYDHATFYIVPNMNPDGSVHGN--------LRTNAAGANLNREWMEP--DAERSPEVLVVRDAIHAI  278 (403)
T ss_dssp             T-CCHHHHHHHHEEEEEESCSCHHHHHTTC--------SSCCTTSCCGGGCSSSC--CTTTCHHHHHHHHHHHHH
T ss_pred             c-CHHHHHHhhccEEEEEeccCchHHhhcc--------cccCCCCCCcccccccC--CcCCCHHHHHHHHHHHhc
Confidence            5 8999999999999999999999999864        27889999999999843  345678888888877665

>3l2n_A Peptidase M14, carboxypeptidase A; putative carboxypeptidase A, structural genomics, joint CENT structural genomics, JCSG; 2.39A {Shewanella denitrificans}

Probab=99.84  E-value=1.6e-21  Score=209.24  Aligned_cols=122  Identities=20%  Similarity=0.259  Sum_probs=105.2

Q ss_pred             EEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhh
Q psy8322         274 VMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNI  353 (651)
Q Consensus       274 ~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v  353 (651)
                      .++.+..|.    ++       |||+|++|+|+++.   .+||.|++.|++|||||+|.+++++++++|+.+   .|+.+
T Consensus       148 ~v~~~~iG~----S~-------eGR~i~~l~i~~~~---~~kp~V~i~agiHg~E~~g~~~~~~ll~~L~~~---~d~~~  210 (395)
T 3l2n_A          148 LVSTEHLGL----TL-------DGRDMTLVKVGDDD---PSKKSIWITARQHPGETMAEWLVEGLLNQLLDN---DCPTS  210 (395)
T ss_dssp             TEEEEEEEE----CT-------TSCEEEEEEESCCC---TTSEEEEEEECSSTTCTHHHHHHHHHHHHHTCT---TSHHH
T ss_pred             ceEEEEEEE----cC-------CCCEEEEEEEecCC---CCCcEEEEEcccCCCCchHHHHHHHHHHHHhhc---CCHHH
Confidence            356677777    88       99999999998753   478999999999999999999999999999974   38999


Q ss_pred             hhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         354 RFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       354 ~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      +.||++++|+|||++||||+++.+        .|.++.|+|||||||-  ..+.++||...++.+..++
T Consensus       211 ~~ll~~~~~~ivP~~NPDG~~~~~--------~R~n~~GvDLNRnf~g--~~~~sepEt~a~~~~l~~~  269 (395)
T 3l2n_A          211 KALLDKANFYIVPNMNPDGSVRGH--------LRTNAVGANLNREWQT--PSLERSPEVYYVVNKMHET  269 (395)
T ss_dssp             HHHHHHEEEEEESCSCHHHHHTTC--------SSCCTTSCCGGGCSSS--CCTTTCHHHHHHHHHHHHH
T ss_pred             HHHhhCcEEEEEeccCCchhhhcc--------cccccCCCCcccccCC--CCcCCCHHHHHHHHHHHhC
Confidence            999999999999999999999864        3778999999999984  3345688998888877765

>4axv_A MPAA; hydrolase; HET: MSE; 2.17A {Vibrio harveyi}

Probab=99.84  E-value=3.5e-22  Score=201.99  Aligned_cols=190  Identities=19%  Similarity=0.269  Sum_probs=135.9

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      +.++.++.+..|.    |+       +||||++++++..     ++|+++++||+||+||+|.+++++++++|+.     
T Consensus        16 r~~~~~~~~~~G~----S~-------~g~pl~~~~~~~~-----~~~~~l~~~g~Hg~E~~g~~~~~~~~~~l~~-----   74 (243)
T 4axv_A           16 RAAFLITPTSYGK----SV-------LGAPLLYFPAQVE-----SNSRGLILAGTHGDETASIAGLSCALRSLPA-----   74 (243)
T ss_dssp             TTSCSSCCEEEEE----CT-------TSCEEEEBCCCSC-----CTTCCEEEECSSTTCCHHHHHHHHHHHHSCG-----
T ss_pred             hcCCccCeeeeee----cC-------CCCcEEEEECCCC-----CCCEEEEECCcCCCCHHHHHHHHHHHHhhhh-----
Confidence            3445555566666    66       9999999998754     5899999999999999999999999998853     


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCC------------------------CCC
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVT------------------------KNK  405 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~------------------------~~~  405 (651)
                              ++.+++|||++||||+++..         |.+..|+|||||||..                        +..
T Consensus        75 --------~~~~~~~ip~~Npdg~~~~~---------r~~~~g~dlNR~fp~~~~~~~~~~~~~~~~~~~~~~~~y~G~~  137 (243)
T 4axv_A           75 --------ECLKHDVILSMNPDANQLGT---------RANANQVDLNRAFPTQNWTEHGTVYRWSSHTPVRDVKVKTGDK  137 (243)
T ss_dssp             --------GGCCSEEESCSCHHHHHTTC---------SSCTTSBCGGGCSCCTTCCSCCEEECSSTTCSSCCEEEBCCBT
T ss_pred             --------cCceEEEEEeEcccchhhcc---------ccCCCCCChhhcCCCCCccccccccccccCCCCCChhhcCCCC
Confidence                    35678999999999998765         7788899999999832                        223


Q ss_pred             CCCCCChHHHHHHHHHhh-ccCCCCcCCCC-----CCCCc----cccccCcceeccceEeccCcccchhhhccceeEEEE
Q psy8322         406 PALTPDTDVFLHLASTYA-RLHPTMHMKRP-----CPGNT----VLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTL  475 (651)
Q Consensus       406 ~~~~~~~~~f~~l~~~~a-~~~~~~~~~~~-----~~~~~----~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~  475 (651)
                      ..++||+.++..+..++. .....+|....     +....    ...+..++. ...+|+.+|++.||++. .+++++|+
T Consensus       138 ~~sePEt~Al~~~i~~~~~~~~islHs~~~~i~~p~~~~~a~~la~~~g~~~~-~~~~y~~~Gs~~d~a~~-~gip~iT~  215 (243)
T 4axv_A          138 EQLEPEVDALISLIELRRPKFVVSFHEPLAFVDDPAHSDLAKWLGKQFNLPIV-DDVDYETPGSFGTWCNE-RQLPCITV  215 (243)
T ss_dssp             TBCCHHHHHHHHHHHHHCCSCEEEEECSSCEEECSSSCHHHHHHHHHHTCCEE-CCSSSSSTTCHHHHHHH-TTCCEEEE
T ss_pred             CcCCHHHHHHHHHHHhhCCcEEEEecCCcccccCCcchHHHHHHHHHhCCCcc-cccCCCCCCCHHHHHHH-CCCcEEEE
Confidence            456788888888887762 11111222111     11000    011122222 23458999999999864 57889999


Q ss_pred             EecccCCCCCCCcchhhhhchHHHHHHHHh
Q psy8322         476 EISCCRYPAPSEIPIHWRSNQNALISWLQQ  505 (651)
Q Consensus       476 El~~~~~p~~~~i~~~w~~nr~all~~~aq  505 (651)
                      ||+      ..+.+..|++++++++.++..
T Consensus       216 ELp------~~~~d~~~e~~~~ai~~~L~~  239 (243)
T 4axv_A          216 ELP------PISADLTIEKHLDAFIALLQH  239 (243)
T ss_dssp             ECC------SCCHHHHHHHHHHHHHHHHTC
T ss_pred             eCC------CCcCcHHHHHHHHHHHHHHhh
Confidence            984      345778899999999988754

>4a37_A Metallo-carboxypeptidase; metallo-protease, hydrolase; 1.60A {Pseudomonas aeruginosa} PDB: 4a38_A 4a39_A*

Probab=99.79  E-value=9.4e-20  Score=195.53  Aligned_cols=125  Identities=18%  Similarity=0.224  Sum_probs=105.9

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      ..| .++.+..|.    ++       |||+|++|+|+.+.   .+||.|++.|++||+||+|.+++++++++|+.+   .
T Consensus       140 ~~p-~v~~~~iG~----S~-------eGR~i~~l~i~~~~---~~kp~v~i~agiHg~E~~g~~~~~~li~~L~~~---~  201 (388)
T 4a37_A          140 GIE-GVERLAVGT----SV-------QGRDIELLRVRRHP---DSHLKLWVIAQQHPGEHMAEWFMEGLIERLQRP---D  201 (388)
T ss_dssp             TST-TEEEEEEEE----CT-------TSCEEEEEEECCCT---TCCEEEEEEECSSTTCTHHHHHHHHHHHHTTCS---S
T ss_pred             hCC-CcEEEEeee----cC-------CCCeEEEEEEecCC---CCCcEEEEEcccCCCCchHHHHHHHHHHHHhhC---C
Confidence            345 467777777    88       99999999998753   478999999999999999999999999999873   3


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHHh
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~  422 (651)
                      |+.++.|+++.+|+|||++||||+++.+        .|.++.|+|||||||..  ...++|+...++.+..++
T Consensus       202 d~~~~~ll~~~~~~ivP~~NPDG~~~~~--------~R~n~~GvDLNRnf~~~--~~~s~pEt~al~~~~~~~  264 (388)
T 4a37_A          202 DTEMQRLLEKADLYLVPNMNPDGAFHGN--------LRTNAAGQDLNRAWLEP--SAERSPEVWFVQQEMKRH  264 (388)
T ss_dssp             CHHHHHHHHHEEEEEESCSCHHHHHTTC--------SSCCTTSCCGGGCSSSC--CTTTCHHHHHHHHHHHHH
T ss_pred             CHHHHhhhcCeEEEEEeccCchHHHhcC--------CcccCCCcCCCCCCCCC--CcccCHHHHHHHHHHHhc
Confidence            8899999999999999999999999854        37789999999999853  334678888888877765

>3b2y_A Metallopeptidase containing CO-catalytic metalloa site; metallopeptidase containing CO-catalytic metalloactive site; 1.74A {Shewanella denitrificans OS217} PDB: 3ieh_A*

Probab=99.66  E-value=4e-17  Score=167.42  Aligned_cols=184  Identities=19%  Similarity=0.238  Sum_probs=131.3

Q ss_pred             CCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCcee
Q psy8322         296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL  375 (651)
Q Consensus       296 egr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~  375 (651)
                      +||+|++++.+..   ..++|.|++.||+||+||+|++++++++++|       +   ..+|++++|+|||++||||++ 
T Consensus        50 ~~~pl~~i~~~~~---~~~~p~v~i~~giHg~E~~g~~~~~~~~~~l-------~---~~ll~~~~i~ivP~~NPdG~~-  115 (275)
T 3b2y_A           50 DSFAINLYQSASQ---RSDLPSLLISSGFHGEEAAGPWGMLHFLRGL-------Q---PALFERVNLSLLPLVNPTGFK-  115 (275)
T ss_dssp             TTEEEEEEECSSC---CTTSCEEEEEECSSTTCTHHHHHHHHHHHHC-------C---GGGGGTCEEEEECCSCHHHHH-
T ss_pred             CCeeEEEEECCCC---CCCCCEEEEEeccCCCcHHHHHHHHHHHHHH-------h---HHHHcCceEEEEeCCChhHhh-
Confidence            5789999877532   3468999999999999999999999999998       2   378999999999999999999 


Q ss_pred             eecccccCCCCCCCceeEeeccCCCCCCCCCCCCCCh-------HHHHHHHHHhh-----ccCCC-----CcC-CCCCCC
Q psy8322         376 AVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDT-------DVFLHLASTYA-----RLHPT-----MHM-KRPCPG  437 (651)
Q Consensus       376 ~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~-------~~f~~l~~~~a-----~~~~~-----~~~-~~~~~~  437 (651)
                              +++|.|+.|+|||||||..+..+.++||.       ..+..+.....     +-|..     ++. ++.+..
T Consensus       116 --------~~~R~n~~gvDLNRnf~~~~~~~~sepEt~~l~~~~~a~~~~~~~~~~~~~id~H~~~~~~g~y~~~~~~~~  187 (275)
T 3b2y_A          116 --------AGHRFNRFGENPNRGFTLENGKPTPNEHTSLEGKLLLEHAQLLCAASRDGILTCHEDVLMNETYVYSFEPTQ  187 (275)
T ss_dssp             --------TTSSSCTTSCCTTSCCCC---------CCCHHHHHHHTTHHHHHHHTTTEEEEEEEETTCSSBEEEEECSSS
T ss_pred             --------cCccCCCCCCccCcCCCCCCCCCCCCCCccccchHHHHHHHHHHhcCCcEEEECCCCCcCCeEEecCCCCCC
Confidence                    45678899999999999877665678898       77766665431     22211     111 011110


Q ss_pred             Cc------------------cccccCc--ceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchH
Q psy8322         438 NT------------------VLKFENG--VTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQN  497 (651)
Q Consensus       438 ~~------------------~~~~~~g--i~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~  497 (651)
                      ..                  ......|  ..+|..+|+++|+++||.|..++++++|+|     +|+...++..|+.|+.
T Consensus       188 ~~~~f~~~~~~~~~~~~~i~~~~~~~G~~~~~G~~~y~~~g~~~d~~~~~~~~~~~T~E-----~p~~~~l~~~v~~~~~  262 (275)
T 3b2y_A          188 TPGRFSLGLRDALGQYFKLAKDGFIDECPVTDGVIFNHFDTSFEAFLVRSGAKLAACSE-----TPGQEDFDRRVQANSA  262 (275)
T ss_dssp             SCCHHHHHHHHHHHTTSCBCC--CBTTBCCBTTEEESCCCSSHHHHHHHTTCSCEEEEE-----EETTSCHHHHHHHHHH
T ss_pred             ChHHHHHHHHHHHHHhccccccCCccCCCCCCceEecCCCCchhhhhhhCCCceEEEEe-----CCCCCcHHHHHHHHHH
Confidence            00                  0000011  123555699999999999999999999999     6778889999999999


Q ss_pred             HHHHHHHhh
Q psy8322         498 ALISWLQQV  506 (651)
Q Consensus       498 all~~~aqa  506 (651)
                      ++..++...
T Consensus       263 al~~~L~~~  271 (275)
T 3b2y_A          263 AMGQFIAHC  271 (275)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHHHHHH
Confidence            998887654

>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*

Probab=99.65  E-value=1.4e-16  Score=169.65  Aligned_cols=148  Identities=23%  Similarity=0.224  Sum_probs=113.5

Q ss_pred             EEEEEeccccCCceEE--EEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEE
Q psy8322          49 TELYSIGKSVLGKDLL--VVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIH  126 (651)
Q Consensus        49 ~~~~~iG~S~egr~i~--~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~  126 (651)
                      ++...+|++++|+++.  +..+...    ...|.|+|+||+||+|+.|.+++.++++.|...    .      + +.+|+
T Consensus         6 ~~~~~~~~~~~G~~~~~~v~~~~g~----~~gp~v~i~agiHG~E~~G~~~~~~l~~~l~~~----~------~-~g~i~   70 (368)
T 3fmc_A            6 KHEVRVGELAAGQPLSLPVYRFKGK----GAGPSVYIQANVHGAEVQGNAVIYQLMKLLEHY----E------L-LGDIS   70 (368)
T ss_dssp             EEEEEEEECTTSCEEEEEEEEECCC----SSCCCEEEEECSSTTCTHHHHHHHHHHHHHTTS----C------B-SSCEE
T ss_pred             EEEEEcccCCCCCeeEEEEEEEeCC----CCCCEEEEECCCCCCCHHHHHHHHHHHHhhhhh----c------c-CCCEE
Confidence            5778899999999664  4677642    356999999999999999999999999998431    1      1 35799


Q ss_pred             EEeccCcccccccccccccCCCCCCCc-cCcCCCCCCCcccCC---------CCCC------------CCC---CCCCCC
Q psy8322         127 LLPNLNPDGSELAVEGNCRSGRGRNNI-NNHDLNRQFPDYFRH---------NRSN------------IPT---LVSTSQ  181 (651)
Q Consensus       127 iiP~~NPDG~~~~~~~~r~~~~~r~n~-~GvDLNRnf~~~w~~---------~~s~------------~p~---y~G~~~  181 (651)
                      ++|++||||++...   |.+..+|.+. .|+||||+||..+..         ++++            .+|   +.  .|
T Consensus        71 ivP~~Np~g~~~~~---~~~~~~R~~~~d~~DLNR~Fpg~~~~ia~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~--~~  145 (368)
T 3fmc_A           71 LVPLANPLGINQKS---GEFTLGRFDPITGVNWNREYLDHGFNIEVWYQEHSHLDDDTLITAFRATLVEECARRLN--NP  145 (368)
T ss_dssp             EECSCCHHHHTCEE---TTEECCSBCTTTCCBGGGCCCCCCSCHHHHHHHHTTSCHHHHHHHHHHHHHHHHHHHHT--CT
T ss_pred             EEECcCHHHHHhhC---ccccccccCCCCCCCCCCCCCCCccccchhhhhccCCchhhhHHHHHHHHHHHHHhhhc--cc
Confidence            99999999999653   2223347665 899999999987541         0111            233   33  78


Q ss_pred             CCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeecc
Q psy8322         182 SIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPY  216 (651)
Q Consensus       182 ~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~  216 (651)
                      ||++|+++++..+.+.  +.+++||+|+++..+.+.|
T Consensus       146 ~s~~~~~~~~~~l~~l~~~aD~~iDLHs~~~~~~~~~  182 (368)
T 3fmc_A          146 WGVTTGHRLAVTLQSMAHRADIVLDLHTGPKSCKHLY  182 (368)
T ss_dssp             TCCCHHHHHHHHHHHHHHTCSEEEEEEEESEECEEEE
T ss_pred             cCccHHHHHHHHHHHHhccCCEEEEeccCCccccccc
Confidence            9999999999999876  6889999999988655554

>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}

Probab=99.60  E-value=2.3e-15  Score=158.90  Aligned_cols=127  Identities=24%  Similarity=0.242  Sum_probs=97.3

Q ss_pred             eccccC--CceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEecc
Q psy8322          54 IGKSVL--GKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNL  131 (651)
Q Consensus        54 iG~S~e--gr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~  131 (651)
                      ++.+..  ...+++++|+.+     .+|.|+|+||+||+||.|.+++..|++.|...           ..+.+++|+|++
T Consensus        24 ~~~~~~~~~~~~pv~~~~~~-----~gp~v~i~agiHG~E~~g~~~~~~ll~~l~~~-----------~~~~~~~ivP~~   87 (332)
T 2qj8_A           24 VPKGADCEALSLPVFSCNRG-----EGPSLLITGGNHGNELQGPILARRLVKWLPEA-----------QRCGRIIIVPEI   87 (332)
T ss_dssp             ECCCSSSCCEEEEEEEEEES-----SSCEEEEEECSSTTCCHHHHHHHHHHHHHHHH-----------BCSEEEEEESCS
T ss_pred             CccCCCCCccceeEEEEeCC-----CCCEEEEECCCCCCCHHHHHHHHHHHHhhhhh-----------ccCcEEEEEeCc
Confidence            455433  235556666532     24899999999999999999999999998753           136789999999


Q ss_pred             CcccccccccccccCCCCCCC-ccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecC
Q psy8322         132 NPDGSELAVEGNCRSGRGRNN-INNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGG  208 (651)
Q Consensus       132 NPDG~~~~~~~~r~~~~~r~n-~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~  208 (651)
                      ||||+++..         |.+ |.|+||||+||..               +..++|.+....+++++  +++++||+|++
T Consensus        88 Np~g~~~~~---------R~~~~~~~DLNR~f~~~---------------~~g~~e~~~a~~~~~~~~~~~d~~iDlHs~  143 (332)
T 2qj8_A           88 NPLAVQAWT---------RNTPIDGKNLNRVFPGR---------------SDGSVSERIADAISRLLLPVVDTVLDLHSF  143 (332)
T ss_dssp             CHHHHHHTC---------SSCTTTCCCTTTTTTCC---------------TTSCHHHHHHHHHHHHTGGGCSEEEEEEEE
T ss_pred             CHHHHHhCc---------CCCccCCCcccccCCCC---------------CCCCHHHHHHHHHHHhhhhcCCEEEECCCC
Confidence            999999743         656 6999999999931               23478888888887776  58999999998


Q ss_pred             c-eeeeecccccc
Q psy8322         209 N-VVASYPYDSFY  220 (651)
Q Consensus       209 ~-~~~~~P~~~~~  220 (651)
                      + ....+||.+..
T Consensus       144 ~~~~~~~p~~~~~  156 (332)
T 2qj8_A          144 GPTWDCAPSIISH  156 (332)
T ss_dssp             ETTEEECSEEEEC
T ss_pred             CCcCCcCcEEEEc
Confidence            6 45667888863

>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}

Probab=99.59  E-value=4e-15  Score=158.24  Aligned_cols=107  Identities=23%  Similarity=0.261  Sum_probs=83.6

Q ss_pred             CCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCC-ccCc
Q psy8322          78 VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNN-INNH  156 (651)
Q Consensus        78 k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n-~~Gv  156 (651)
                      .|.|+|+||+||+|+.|.++++.|++.|...           ..+.+|+|||++||||++...         |.+ |.|+
T Consensus        53 gp~v~i~agiHG~E~~g~~~~~~ll~~l~~~-----------~~~g~l~ivP~~Np~g~~~~~---------R~~~~~~~  112 (354)
T 3cdx_A           53 GPTVLLTGGVHGDEYEGQIAISDLARRLRPE-----------EVQGRVIMLPAVNMPAIQSDT---------RLSPVDGR  112 (354)
T ss_dssp             CCEEEEEECSSTTCCHHHHHHHHHHHHCCGG-----------GCSEEEEEESCSCHHHHHHTC---------SSCTTTCC
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHHhhhc-----------ccCCEEEEEECcCHHHHHhhC---------CCCCCCCc
Confidence            3899999999999999999999999888542           125689999999999999753         666 5999


Q ss_pred             CCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeee-ccccc
Q psy8322         157 DLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASY-PYDSF  219 (651)
Q Consensus       157 DLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~-P~~~~  219 (651)
                      ||||+||..+               ..++|.+....+++..  +++++||+|++.....| ||.+.
T Consensus       113 DLNR~f~~~~---------------~g~~~~~~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~~~~  163 (354)
T 3cdx_A          113 DINRCFPGDP---------------RGTFSQMLAHFLDSVILPMADISVDMHTAGHSYDSTPSTNM  163 (354)
T ss_dssp             CGGGSTTCCT---------------TSCHHHHHHHHHHHTTGGGCSEEEEECCCTTTEEECSEEEE
T ss_pred             cccccCCCCC---------------CCCHHHHHHHHHHHHHHhcCCEEEEcCCCCCccccCCEEEe
Confidence            9999999422               2356666555555554  68999999999865554 78775

>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}

Probab=99.33  E-value=1.6e-12  Score=136.70  Aligned_cols=105  Identities=19%  Similarity=0.251  Sum_probs=76.0

Q ss_pred             CCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCc-cCc
Q psy8322          78 VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNI-NNH  156 (651)
Q Consensus        78 k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~-~Gv  156 (651)
                      .|.|+|+|++||+|+.|.+++.+|++.|...           ..+.++++||++||||++...         |.+. .|+
T Consensus        49 gp~v~i~agiHG~E~~G~~~~~~l~~~l~~~-----------~~~g~~~ivP~~Np~g~~~~~---------R~~~~~~~  108 (331)
T 3na6_A           49 GKTALLTGANHGDEYEGPVALQELAATTRAE-----------DVTGRLIIVPYFNYPAFRASA---------RTSPIDRG  108 (331)
T ss_dssp             CCEEEEECCSSTTCCHHHHHHHHHHHHCCGG-----------GCSEEEEEESCSSHHHHHTTS---------SSCTTTCC
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHHhhHH-----------hcCCcEEEEECcCHHHHHhCc---------ccCCCCCC
Confidence            4899999999999999999999888887531           124569999999999998643         7776 899


Q ss_pred             CCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCcee-eeeccc
Q psy8322         157 DLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVV-ASYPYD  217 (651)
Q Consensus       157 DLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~-~~~P~~  217 (651)
                      ||||+||...              .. .++.+....++++.  +.++.+|+|++... -..|+.
T Consensus       109 DLNR~Fp~~~--------------~g-~~~~~~a~~~~~~~~~~~d~~iDLH~~~~~~~~~p~~  157 (331)
T 3na6_A          109 NLNRAFPGRP--------------DG-TVTQKIADYFQRTLLPMADVAVDFHSGGKTLDFVPFA  157 (331)
T ss_dssp             CGGGCTTCCT--------------TS-CHHHHHHHHHHHTTGGGCSEEEECCCCCTTEEECCEE
T ss_pred             chHhhCCCCC--------------CC-CHHHHHHHHHHHhhhhcCCEEEEcCCCCCccccCceE
Confidence            9999999322              12 23334333444443  47899999987542 233544

>1yw6_A Succinylglutamate desuccinylase; alpha-beta protein., structural genomics, PSI, protein structure initiative; 3.10A {Escherichia coli} SCOP: c.56.5.7

Probab=99.32  E-value=4e-12  Score=133.98  Aligned_cols=151  Identities=21%  Similarity=0.166  Sum_probs=97.0

Q ss_pred             HHHHHHHH-HHHHHcCCcEEEEEecc--ccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHH
Q psy8322          32 DLMREELE-NFTRVYANMTELYSIGK--SVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVE  108 (651)
Q Consensus        32 ~ei~~~l~-~l~~~~p~~~~~~~iG~--S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~  108 (651)
                      ++|.+||. .|+.++|........|.  +..|+.+..++=..     ...|.|+|+||+||+|..|.+++..|++.|...
T Consensus         4 ~~~~~fl~~~l~~~~~~~~~~~~~~~~~~~~g~gv~~~~p~~-----~~gp~v~i~agiHGnE~~G~~~~~~ll~~l~~~   78 (335)
T 1yw6_A            4 DPMDNFLALTLTGKKPVITEREINGVRWRWLGDGVLELTPLT-----PPQGALVISAGIHGNETAPVEMLDALLGAISHG   78 (335)
T ss_dssp             CHHHHHHHHHHHCCCCSBCEEESSSEEEEEEETTEEEEEESS-----CCSCEEEEEECSSSSCCHHHHHHHHHHHHHHTT
T ss_pred             CchhhHHHHHhcCCCcccccccCCCeEEEEecCcEEEecCCC-----CCCCEEEEEcCCCCCCHHHHHHHHHHHHhhhhc
Confidence            57889999 68888885321112344  45555554443221     236999999999999999999999999998642


Q ss_pred             hccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCc-HHH
Q psy8322         109 YIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSID-PEV  187 (651)
Q Consensus       109 ~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~se-pEt  187 (651)
                               .+..... .++|++||+|++...         |.+  +.||||+||..+...          ....| ..+
T Consensus        79 ---------~~~~~~~-v~vp~~Np~g~~~~~---------R~~--~~DLNR~Fpg~~~~~----------~~~~e~~rA  127 (335)
T 1yw6_A           79 ---------EIPLRWR-LLVILGNPPALKQGK---------RYC--HSDMNRMFGGRWQLF----------AESGETCRA  127 (335)
T ss_dssp             ---------SSCCCSE-EEEECCSHHHHTSCC---------C-----CCSTTSSSSSSCCS----------SCCHHHHHH
T ss_pred             ---------cccCceE-EEEEccCHHHHHhCC---------CCC--CCCcccccCCccccC----------CCChHHHHH
Confidence                     1222344 447999999998642         444  689999999654322          00112 135


Q ss_pred             HHHHHHHHhC------CcEEEEEEecCce-eeeecccc
Q psy8322         188 QAVIDWMNSV------PFVMSLQLHGGNV-VASYPYDS  218 (651)
Q Consensus       188 ~al~~~~~~~------~~~~~i~~H~~~~-~~~~P~~~  218 (651)
                      ++|.+++.++      +.++.||+|++.. ...+||..
T Consensus       128 ~~l~~~~~~~~~~~~~~~d~~iDlHs~~~~~~~~~~~~  165 (335)
T 1yw6_A          128 RELEQCLEDFYDQGKESVRWHLDLHTAIRGSLHPQFGV  165 (335)
T ss_dssp             HHHHHHHHHHHHTTCCSCEEEEEEECCSSCBSSSSEEE
T ss_pred             HHHHHHHHHHhhcccccceEEEECCCCCcccccCCEEE
Confidence            6677766553      4799999998742 22344444

>3cdx_A Succinylglutamatedesuccinylase/aspartoacylase; structural genomics, PSI-2, protein structure initiative; 2.10A {Rhodobacter sphaeroides 2}

Probab=99.24  E-value=5.6e-12  Score=133.95  Aligned_cols=164  Identities=20%  Similarity=0.147  Sum_probs=99.1

Q ss_pred             CCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCc-eeE
Q psy8322         315 VPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPP-FLI  393 (651)
Q Consensus       315 ~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~-~gv  393 (651)
                      .|.|+++|++||+|+.|.+++..++++|....           .+.+|+|||++||||++...         |.+. .|+
T Consensus        53 gp~v~i~agiHG~E~~g~~~~~~ll~~l~~~~-----------~~g~l~ivP~~Np~g~~~~~---------R~~~~~~~  112 (354)
T 3cdx_A           53 GPTVLLTGGVHGDEYEGQIAISDLARRLRPEE-----------VQGRVIMLPAVNMPAIQSDT---------RLSPVDGR  112 (354)
T ss_dssp             CCEEEEEECSSTTCCHHHHHHHHHHHHCCGGG-----------CSEEEEEESCSCHHHHHHTC---------SSCTTTCC
T ss_pred             CCEEEEECCCCCCCHHHHHHHHHHHHHhhhcc-----------cCCEEEEEECcCHHHHHhhC---------CCCCCCCc
Confidence            49999999999999999999999999874321           25689999999999998743         5654 799


Q ss_pred             eeccCCCCCCCCCCCCCChHHHHHHHHHhh---ccCCCCcCCC------C--CCCCcc-----c---cc--cCcceeccc
Q psy8322         394 SLFLPFPVTKNKPALTPDTDVFLHLASTYA---RLHPTMHMKR------P--CPGNTV-----L---KF--ENGVTNGAA  452 (651)
Q Consensus       394 dlnrnf~~~~~~~~~~~~~~~f~~l~~~~a---~~~~~~~~~~------~--~~~~~~-----~---~~--~~gi~n~~~  452 (651)
                      ||||+||....   .+++.+....+...+.   +-+-.+|...      +  +.....     .   ..  ..|..-. .
T Consensus       113 DLNR~f~~~~~---g~~~~~~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~~~~~~~~~~~~~~~~~~la~~~g~~~~-~  188 (354)
T 3cdx_A          113 DINRCFPGDPR---GTFSQMLAHFLDSVILPMADISVDMHTAGHSYDSTPSTNMHYLADPALRARTLAAAEAFGAPHN-V  188 (354)
T ss_dssp             CGGGSTTCCTT---SCHHHHHHHHHHHTTGGGCSEEEEECCCTTTEEECSEEEECCCSSHHHHHHHHHHHHHHCCSEE-E
T ss_pred             cccccCCCCCC---CCHHHHHHHHHHHHHHhcCCEEEEcCCCCCccccCCEEEeccCCCchhHHHHHHHHHHhCCCEE-E
Confidence            99999986422   1445555555554331   1111222211      0  000000     0   00  0011000 0


Q ss_pred             e--EeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         453 W--YSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       453 ~--y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      +  ++..+++.||++...+++++|+|+++++....+    .-+..+..++.++...
T Consensus       189 ~~~~~~~~Gsl~~~~~~~g~~a~tiElG~~~~~~~~----~~~~~~~gi~~~L~~~  240 (354)
T 3cdx_A          189 VFGGVDEGSTFTSCVERRGIVSLGTELGGWGRVNIE----GVRIGKRGILNVLKHM  240 (354)
T ss_dssp             ECC-----CSHHHHHHHTTCEEEEEECCCTTSCCHH----HHHHHHHHHHHHHHHT
T ss_pred             EecCCCCCCcHHHHHHHcCCEEEEEECCCCCCCCHH----HHHHHHHHHHHHHHHc
Confidence            1  345667888888788899999999976533322    2344566777776653

>2qj8_A MLR6093 protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE; 2.00A {Mesorhizobium loti}

Probab=99.21  E-value=1.2e-11  Score=130.24  Aligned_cols=177  Identities=18%  Similarity=0.149  Sum_probs=105.1

Q ss_pred             CcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceee
Q psy8322         297 SKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELA  376 (651)
Q Consensus       297 gr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~  376 (651)
                      ...+.+++|+.+     .+|.|+++|++||+||.|.+++..++++|....           .+.+++|+|++||||+++.
T Consensus        32 ~~~~pv~~~~~~-----~gp~v~i~agiHG~E~~g~~~~~~ll~~l~~~~-----------~~~~~~ivP~~Np~g~~~~   95 (332)
T 2qj8_A           32 ALSLPVFSCNRG-----EGPSLLITGGNHGNELQGPILARRLVKWLPEAQ-----------RCGRIIIVPEINPLAVQAW   95 (332)
T ss_dssp             CEEEEEEEEEES-----SSCEEEEEECSSTTCCHHHHHHHHHHHHHHHHB-----------CSEEEEEESCSCHHHHHHT
T ss_pred             ccceeEEEEeCC-----CCCEEEEECCCCCCCHHHHHHHHHHHHhhhhhc-----------cCcEEEEEeCcCHHHHHhC
Confidence            344555555432     359999999999999999999999999986531           3578999999999999874


Q ss_pred             ecccccCCCCCCCc-eeEeeccCCCCCCCCCCCCCChHHHHHHHHHhh---ccCCCCcCCC------C---CCCCcc---
Q psy8322         377 VEGNCRSGRGRTPP-FLISLFLPFPVTKNKPALTPDTDVFLHLASTYA---RLHPTMHMKR------P---CPGNTV---  440 (651)
Q Consensus       377 ~~~~~~~~kgr~~~-~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~~a---~~~~~~~~~~------~---~~~~~~---  440 (651)
                      .         |.+. .|+||||+||....   .+++......+.+.+.   +-+-.+|...      +   +.....   
T Consensus        96 ~---------R~~~~~~~DLNR~f~~~~~---g~~e~~~a~~~~~~~~~~~d~~iDlHs~~~~~~~~p~~~~~~~~~~~~  163 (332)
T 2qj8_A           96 T---------RNTPIDGKNLNRVFPGRSD---GSVSERIADAISRLLLPVVDTVLDLHSFGPTWDCAPSIISHPIADIDQ  163 (332)
T ss_dssp             C---------SSCTTTCCCTTTTTTCCTT---SCHHHHHHHHHHHHTGGGCSEEEEEEEEETTEEECSEEEECCCSCHHH
T ss_pred             c---------CCCccCCCcccccCCCCCC---CCHHHHHHHHHHHhhhhcCCEEEECCCCCCcCCcCcEEEEccCCchhH
Confidence            3         5554 79999999986421   2456666666655442   1111222210      0   000000   


Q ss_pred             --c--cc--cCcceeccce-EeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         441 --L--KF--ENGVTNGAAW-YSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       441 --~--~~--~~gi~n~~~~-y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                        .  ..  ..|..-...+ -...+++-||++...+++++|+|++.+ .-..+    ..+.-+.++..++...
T Consensus       164 ~~~~~~la~~~g~~~~~~~~~~~~~gsl~~~~~~~g~~a~tiElG~~-~~~~~----~~~~~~~gi~~~L~~~  231 (332)
T 2qj8_A          164 MTKTVSISKAFKLPVTLLWEHNETDGMFDTLVHRQGKTFICTEFGGG-VVSAE----ALTIYEAGVRNGLIAL  231 (332)
T ss_dssp             HHHHHHHHHTTCCSEEEEECCCCCTTHHHHHTTTTCCEEEEEEEECC-----------CHHHHHHHHHHHHHT
T ss_pred             HHHHHHHHHHhCCCEEEEecCCCCCCcHHHHHHHcCCeEEEEEecCc-ccCHH----HHHHHHHHHHHHHHHC
Confidence              0  00  1111000000 113567778887778899999999975 21222    2233455677766543

>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A

Probab=99.16  E-value=8.3e-12  Score=132.24  Aligned_cols=110  Identities=18%  Similarity=0.188  Sum_probs=82.9

Q ss_pred             HHHHHHH-HHH---HHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHH
Q psy8322          33 LMREELE-NFT---RVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVE  108 (651)
Q Consensus        33 ei~~~l~-~l~---~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~  108 (651)
                      +|.+||. .|+   .++|. .+....|.+.+.+...+++++.... ....|.|+|.||+||+|..|.+++..|++.|...
T Consensus         6 ~~~~fl~~~l~~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~p~~~-~~~gp~vlI~aGiHGnE~~G~~~~~~ll~~l~~~   83 (350)
T 2bco_A            6 FRQSFLTDTLDVHIDVAPA-EQVLSNGVQLKLYQRGVLEVIPENP-TQETKNIIISCGIHGDETAPMELVDSIIKDIESG   83 (350)
T ss_dssp             SSSCHHHHHHCSCC-CCCE-EEECTTSCEEEEEETTEEEEECSSC-CTTCCEEEEEECSSTTBCHHHHHHHHHHHHHHTT
T ss_pred             hhHhHHHHHhhhccCCCcc-ccccCCceEEEEECCeEEEEeCCcc-CCCCCEEEEEcCCCCCcHhHHHHHHHHHHHhHhh
Confidence            4566888 476   67784 4455568888888888899975421 1236999999999999999999999999988642


Q ss_pred             hccCChhHHHhhcCceEEEEecc-CcccccccccccccCCCCCCCccCcCCCCCCCccc
Q psy8322         109 YIRGDSNIRFLLDNTRIHLLPNL-NPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYF  166 (651)
Q Consensus       109 ~~~~d~~~~~ll~~~~~~iiP~~-NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w  166 (651)
                          .       ...++.++|++ ||+|++...         |.+  +.||||+||..+
T Consensus        84 ----~-------~~g~~~vvp~~~Np~a~~~~~---------R~~--~~DLNR~Fpg~~  120 (350)
T 2bco_A           84 ----F-------QKVDARCLFIIAHPESTLAHT---------RFL--EENLNRLFDEKE  120 (350)
T ss_dssp             ----C-------SCCCSEEEEEECCHHHHHTTS---------SCS--SSCGGGCSSSSC
T ss_pred             ----c-------cCceEEEEEEeCCHHHHHhCC---------ccC--CCCCCCCCCCCC
Confidence                1       23568899999 999998643         554  999999999533

>3fmc_A Putative succinylglutamate desuccinylase / aspart; S genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.80A {Shewanella amazonensis} PDB: 3lwu_A*

Probab=99.08  E-value=6.4e-11  Score=126.05  Aligned_cols=90  Identities=26%  Similarity=0.255  Sum_probs=72.1

Q ss_pred             CCcc--eEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCc
Q psy8322         296 ESKD--LLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGS  373 (651)
Q Consensus       296 egr~--i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~  373 (651)
                      +|++  |.+..+...    ...|.|+++||+||+||.|.+++.+++++|....          + +.+++++|++||||+
T Consensus        16 ~G~~~~~~v~~~~g~----~~gp~v~i~agiHG~E~~G~~~~~~l~~~l~~~~----------~-~g~i~ivP~~Np~g~   80 (368)
T 3fmc_A           16 AGQPLSLPVYRFKGK----GAGPSVYIQANVHGAEVQGNAVIYQLMKLLEHYE----------L-LGDISLVPLANPLGI   80 (368)
T ss_dssp             TSCEEEEEEEEECCC----SSCCCEEEEECSSTTCTHHHHHHHHHHHHHTTSC----------B-SSCEEEECSCCHHHH
T ss_pred             CCCeeEEEEEEEeCC----CCCCEEEEECCCCCCCHHHHHHHHHHHHhhhhhc----------c-CCCEEEEECcCHHHH
Confidence            5665  455666543    2579999999999999999999999999984221          1 357999999999999


Q ss_pred             eeeecccccCCCCCCCc-eeEeeccCCCCCC
Q psy8322         374 ELAVEGNCRSGRGRTPP-FLISLFLPFPVTK  403 (651)
Q Consensus       374 ~~~~~~~~~~~kgr~~~-~gvdlnrnf~~~~  403 (651)
                      +...   |.|++||.+. .|+||||+||-..
T Consensus        81 ~~~~---~~~~~~R~~~~d~~DLNR~Fpg~~  108 (368)
T 3fmc_A           81 NQKS---GEFTLGRFDPITGVNWNREYLDHG  108 (368)
T ss_dssp             TCEE---TTEECCSBCTTTCCBGGGCCCCCC
T ss_pred             HhhC---ccccccccCCCCCCCCCCCCCCCc
Confidence            9654   6788899875 8999999999654

>1yw4_A Succinylglutamate desuccinylase; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.00A {Chromobacterium violaceum} SCOP: c.56.5.7

Probab=99.01  E-value=6e-10  Score=117.54  Aligned_cols=109  Identities=22%  Similarity=0.259  Sum_probs=79.2

Q ss_pred             EEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc
Q psy8322          65 VVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC  144 (651)
Q Consensus        65 ~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r  144 (651)
                      ++++...   ....|.|+|+||+||+|..|.+++..+++.|...         .+..+.++. +|++||+|++...    
T Consensus        36 ~l~~~p~---~~~gp~v~i~agiHGnE~~G~~~~~~l~~~l~~~---------~l~~~g~v~-vp~~Np~a~~~~~----   98 (341)
T 1yw4_A           36 CVELNGD---ARGADSVLLSCGVHGNETAPIEVVDGMLTDIAAG---------QLALNCRLL-VMFANLDAIRQGV----   98 (341)
T ss_dssp             EEEESTT---CTTSCEEEEEECSSTTCCHHHHHHHHHHHHHHHT---------SSCCCSEEE-EEECCHHHHHHTS----
T ss_pred             eEEeCCC---CCCCCEEEEECCCCCCchHHHHHHHHHHHhhhhh---------cccCceEEE-EEEECHHHHHhcC----
Confidence            4555432   2235899999999999999999999999998752         122356776 9999999998643    


Q ss_pred             cCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHH---HHHHHHHHHhC-----CcEEEEEEecCc
Q psy8322         145 RSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPE---VQAVIDWMNSV-----PFVMSLQLHGGN  209 (651)
Q Consensus       145 ~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepE---t~al~~~~~~~-----~~~~~i~~H~~~  209 (651)
                           |.  .+.||||.||..+...            .+.+|   ++.+.+.+.++     +.++.||+|++.
T Consensus        99 -----R~--~~~DlNR~Fpg~~~g~------------~~~~e~~rA~~l~~~~~~~~~~~~~~d~~iDLH~~~  152 (341)
T 1yw4_A           99 -----RY--GNYDMNRLFNGAHARH------------PELPESVRAAELETLAAEFFAGARARKLHYDLHTAI  152 (341)
T ss_dssp             -----SC--SSSCGGGSTTTGGGGC------------TTCHHHHHHHHHHHHHHHHHHTCSSCEEEEEEEEES
T ss_pred             -----CC--CcCCcCcCCCcccccC------------CCCHHHHHHHHHHHHHHHhcccCCCCcEEEECCCCC
Confidence                 54  6899999999644322            11445   66666666544     689999999763

>2gu2_A ASPA protein; aspartoacylase family, aminoacylase-2, ACY-2, ACY2_RAT, STRU genomics, PSI, protein structure initiative; HET: MSE; 1.80A {Rattus norvegicus} SCOP: c.56.5.7 PDB: 2q4z_A 2i3c_A 2q51_A 2o4h_A* 2o53_A

Probab=99.00  E-value=2.1e-10  Score=119.53  Aligned_cols=101  Identities=22%  Similarity=0.306  Sum_probs=73.8

Q ss_pred             CCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEecc-CcccccccccccccCCCCCCCccC
Q psy8322          77 GVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNL-NPDGSELAVEGNCRSGRGRNNINN  155 (651)
Q Consensus        77 ~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~-NPDG~~~~~~~~r~~~~~r~n~~G  155 (651)
                      ..|.|+|+||+||+|..|.+++.    .|++..        ..+.+.++.++|++ ||+|+....         |.  .+
T Consensus         9 ~gp~v~I~agiHGnE~~G~~~~~----~l~~~~--------~~~~~g~v~vvP~~~Np~a~~~~~---------R~--~~   65 (312)
T 2gu2_A            9 PIKKIAIFGGTHGNELTGVFLVT----HWLKNG--------AEVHRAGLEVKPFITNPRAVEKCT---------RY--ID   65 (312)
T ss_dssp             CCCEEEEEECSSTTCHHHHHHHH----HHHHCG--------GGGCCTTCEEEEEESCHHHHHTTS---------SC--SS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHH----HHHhCc--------hhhccCeEEEEEeCCCHHHHHhCC---------CC--cC
Confidence            35899999999999999999764    444421        13455679999999 999998643         54  79


Q ss_pred             cCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-------CcEEEEEEecC
Q psy8322         156 HDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV-------PFVMSLQLHGG  208 (651)
Q Consensus       156 vDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~-------~~~~~i~~H~~  208 (651)
                      .||||.||..+....        ....+.+|.+....++...       +.++.||+|++
T Consensus        66 ~DLNR~Fpg~~~g~~--------~~~~~~~e~r~A~~l~~~~~~~~~~~~~d~~iDLHs~  117 (312)
T 2gu2_A           66 CDLNRVFDLENLSKE--------MSEDLPYEVRRAQEINHLFGPKNSDDAYDVVFDLHNT  117 (312)
T ss_dssp             SCGGGCCSHHHHTCC--------CCTTSCHHHHHHHHHHHHHCCTTSTTSCSEEEEEEEC
T ss_pred             CCcccCCCCcccCCc--------cccCCCHHHHHHHHHHHHHhhhccCcCceEEEECCCC
Confidence            999999996543220        0012378888777777764       67899999985

>3na6_A Succinylglutamate desuccinylase/aspartoacylase; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE; 2.00A {Ruegeria SP}

Probab=98.95  E-value=3.2e-10  Score=119.10  Aligned_cols=79  Identities=23%  Similarity=0.214  Sum_probs=61.7

Q ss_pred             cceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeee
Q psy8322         298 KDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAV  377 (651)
Q Consensus       298 r~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~  377 (651)
                      -|+++++.+       ..|.|+++|++||+|+.|.+++.++++.|....           ..-+++|+|++||||++...
T Consensus        39 ~pv~~~~~g-------~gp~v~i~agiHG~E~~G~~~~~~l~~~l~~~~-----------~~g~~~ivP~~Np~g~~~~~  100 (331)
T 3na6_A           39 IPITVIQNG-------AGKTALLTGANHGDEYEGPVALQELAATTRAED-----------VTGRLIIVPYFNYPAFRASA  100 (331)
T ss_dssp             EEEEEEEES-------SCCEEEEECCSSTTCCHHHHHHHHHHHHCCGGG-----------CSEEEEEESCSSHHHHHTTS
T ss_pred             eeEEEEecC-------CCCEEEEECCCCCCCHHHHHHHHHHHHHhhHHh-----------cCCcEEEEECcCHHHHHhCc
Confidence            355555543       258999999999999999999999998875321           23469999999999997543


Q ss_pred             cccccCCCCCCCc-eeEeeccCCCCCC
Q psy8322         378 EGNCRSGRGRTPP-FLISLFLPFPVTK  403 (651)
Q Consensus       378 ~~~~~~~kgr~~~-~gvdlnrnf~~~~  403 (651)
                               |.+. .++||||+||-..
T Consensus       101 ---------R~~~~~~~DLNR~Fp~~~  118 (331)
T 3na6_A          101 ---------RTSPIDRGNLNRAFPGRP  118 (331)
T ss_dssp             ---------SSCTTTCCCGGGCTTCCT
T ss_pred             ---------ccCCCCCCchHhhCCCCC
Confidence                     5665 7999999998653

>3nh4_A Aspartoacylase-2; mercapturates, hydrolase; 2.00A {Mus musculus} SCOP: c.56.5.0 PDB: 3nh5_A 3nfz_A 3nh8_A*

Probab=98.75  E-value=8.6e-09  Score=107.22  Aligned_cols=101  Identities=23%  Similarity=0.289  Sum_probs=71.8

Q ss_pred             CCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEec-cCcccccccccccccCCCCCCCccC
Q psy8322          77 GVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPN-LNPDGSELAVEGNCRSGRGRNNINN  155 (651)
Q Consensus        77 ~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~-~NPDG~~~~~~~~r~~~~~r~n~~G  155 (651)
                      ..|.|+|+||+||+|..|.+++..+++...           . ...-++.++|+ +||.|++...         |..  .
T Consensus        19 ~gp~v~i~agiHGnE~~Gi~~~~~l~~~~~-----------~-~~~g~v~~~p~~~Np~a~~~~~---------R~~--~   75 (327)
T 3nh4_A           19 PLLRVAVTGGTHGNEMCGVYLARYWLQNPG-----------E-LQRPSFSAMPVLANPAATAACC---------RYL--D   75 (327)
T ss_dssp             CCCSEEEEECSSTTCHHHHHHHHHHHHCGG-----------G-GEETTEEEEEEESCHHHHHHTS---------SCS--S
T ss_pred             CCCEEEEEecccCCchHHHHHHHHHHhcch-----------h-hcCCcEEEEEeccCHHHHHhcC---------CCC--C
Confidence            358999999999999999999877766421           1 12345889998 9999999643         543  5


Q ss_pred             cCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-------CcEEEEEEecC
Q psy8322         156 HDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV-------PFVMSLQLHGG  208 (651)
Q Consensus       156 vDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~-------~~~~~i~~H~~  208 (651)
                      .||||.||-.+.....        .....+|.+.-..+....       +.++.||+|++
T Consensus        76 ~DLNR~Fpg~~~~~~~--------~~~~s~e~r~A~~l~~~l~p~~~~~~~d~~iDLHs~  127 (327)
T 3nh4_A           76 RDLNRSCTLTFLGSTA--------TPDDPYEVKRARELNQLLGPKGTGQAFDFTLDLHNT  127 (327)
T ss_dssp             SCGGGCCSHHHHTSCC--------CTTSCHHHHHHHHHHHHHCCTTSTTSCSEEEEEEEC
T ss_pred             CCcccCCCCccccccC--------cCCCCHHHHHHHHHHHHhhhccCCcCCcEEEECcCC
Confidence            8999999965543200        001356766666665554       47899999988

>1yw6_A Succinylglutamate desuccinylase; alpha-beta protein., structural genomics, PSI, protein structure initiative; 3.10A {Escherichia coli} SCOP: c.56.5.7

Probab=98.20  E-value=1.3e-06  Score=91.81  Aligned_cols=69  Identities=20%  Similarity=0.061  Sum_probs=52.3

Q ss_pred             CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeE
Q psy8322         314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLI  393 (651)
Q Consensus       314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gv  393 (651)
                      ..|.|+++||+||+|+.|.+++..+++.|....         +..+.. .++|++||+|+....         |.+  +.
T Consensus        47 ~gp~v~i~agiHGnE~~G~~~~~~ll~~l~~~~---------~~~~~~-v~vp~~Np~g~~~~~---------R~~--~~  105 (335)
T 1yw6_A           47 PQGALVISAGIHGNETAPVEMLDALLGAISHGE---------IPLRWR-LLVILGNPPALKQGK---------RYC--HS  105 (335)
T ss_dssp             CSCEEEEEECSSSSCCHHHHHHHHHHHHHHTTS---------SCCCSE-EEEECCSHHHHTSCC---------C-----C
T ss_pred             CCCEEEEEcCCCCCCHHHHHHHHHHHHhhhhcc---------ccCceE-EEEEccCHHHHHhCC---------CCC--CC
Confidence            469999999999999999999999999986421         222334 447999999998743         332  47


Q ss_pred             eeccCCCCCC
Q psy8322         394 SLFLPFPVTK  403 (651)
Q Consensus       394 dlnrnf~~~~  403 (651)
                      ||||+||-..
T Consensus       106 DLNR~Fpg~~  115 (335)
T 1yw6_A          106 DMNRMFGGRW  115 (335)
T ss_dssp             CSTTSSSSSS
T ss_pred             CcccccCCcc
Confidence            9999998654

>2bco_A Succinylglutamate desuccinylase; NESG, VPR14, structural genomics, PSI, protein structure initiative; 2.33A {Vibrio parahaemolyticus} SCOP: c.56.5.7 PDB: 2g9d_A

Probab=98.04  E-value=1.5e-06  Score=91.84  Aligned_cols=68  Identities=19%  Similarity=0.224  Sum_probs=55.1

Q ss_pred             CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEecc-CcCCceeeecccccCCCCCCCcee
Q psy8322         314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNL-NPDGSELAVEGNCRSGRGRTPPFL  392 (651)
Q Consensus       314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~-NpDG~~~~~~~~~~~~kgr~~~~g  392 (651)
                      ..|.|+++||+||+|..|.+++..+++.|...-           ..-.+.++|++ ||+|+....         |..  +
T Consensus        52 ~gp~vlI~aGiHGnE~~G~~~~~~ll~~l~~~~-----------~~g~~~vvp~~~Np~a~~~~~---------R~~--~  109 (350)
T 2bco_A           52 ETKNIIISCGIHGDETAPMELVDSIIKDIESGF-----------QKVDARCLFIIAHPESTLAHT---------RFL--E  109 (350)
T ss_dssp             TCCEEEEEECSSTTBCHHHHHHHHHHHHHHTTC-----------SCCCSEEEEEECCHHHHHTTS---------SCS--S
T ss_pred             CCCEEEEEcCCCCCcHhHHHHHHHHHHHhHhhc-----------cCceEEEEEEeCCHHHHHhCC---------ccC--C
Confidence            369999999999999999999999999885421           23467889999 999998643         333  7


Q ss_pred             EeeccCCCCCC
Q psy8322         393 ISLFLPFPVTK  403 (651)
Q Consensus       393 vdlnrnf~~~~  403 (651)
                      .||||.||-..
T Consensus       110 ~DLNR~Fpg~~  120 (350)
T 2bco_A          110 ENLNRLFDEKE  120 (350)
T ss_dssp             SCGGGCSSSSC
T ss_pred             CCCCCCCCCCC
Confidence            89999998654

>1yw4_A Succinylglutamate desuccinylase; alpha-beta protein, structural genomics, PSI, protein struct initiative; 2.00A {Chromobacterium violaceum} SCOP: c.56.5.7

Probab=97.99  E-value=3e-06  Score=89.14  Aligned_cols=68  Identities=22%  Similarity=0.187  Sum_probs=54.9

Q ss_pred             CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeE
Q psy8322         314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLI  393 (651)
Q Consensus       314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gv  393 (651)
                      ..|.|+++||+||+|..|.+++..+++.|....         +..+.++. +|++||.|+....         |.  .+.
T Consensus        45 ~gp~v~i~agiHGnE~~G~~~~~~l~~~l~~~~---------l~~~g~v~-vp~~Np~a~~~~~---------R~--~~~  103 (341)
T 1yw4_A           45 GADSVLLSCGVHGNETAPIEVVDGMLTDIAAGQ---------LALNCRLL-VMFANLDAIRQGV---------RY--GNY  103 (341)
T ss_dssp             TSCEEEEEECSSTTCCHHHHHHHHHHHHHHHTS---------SCCCSEEE-EEECCHHHHHHTS---------SC--SSS
T ss_pred             CCCEEEEECCCCCCchHHHHHHHHHHHhhhhhc---------ccCceEEE-EEEECHHHHHhcC---------CC--CcC
Confidence            369999999999999999999999999986533         12255676 9999999998742         43  478


Q ss_pred             eeccCCCCC
Q psy8322         394 SLFLPFPVT  402 (651)
Q Consensus       394 dlnrnf~~~  402 (651)
                      ||||.||-.
T Consensus       104 DlNR~Fpg~  112 (341)
T 1yw4_A          104 DMNRLFNGA  112 (341)
T ss_dssp             CGGGSTTTG
T ss_pred             CcCcCCCcc
Confidence            999999864

>2gu2_A ASPA protein; aspartoacylase family, aminoacylase-2, ACY-2, ACY2_RAT, STRU genomics, PSI, protein structure initiative; HET: MSE; 1.80A {Rattus norvegicus} SCOP: c.56.5.7 PDB: 2q4z_A 2i3c_A 2q51_A 2o4h_A* 2o53_A

Probab=97.92  E-value=3.2e-06  Score=87.86  Aligned_cols=86  Identities=19%  Similarity=0.260  Sum_probs=59.0

Q ss_pred             CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEecc-CcCCceeeecccccCCCCCCCcee
Q psy8322         314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNL-NPDGSELAVEGNCRSGRGRTPPFL  392 (651)
Q Consensus       314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~-NpDG~~~~~~~~~~~~kgr~~~~g  392 (651)
                      ..|.|+++||+||+|+.|.+++..+++.+            ..+.+-++.++|++ ||+|+....         |.  .+
T Consensus         9 ~gp~v~I~agiHGnE~~G~~~~~~l~~~~------------~~~~~g~v~vvP~~~Np~a~~~~~---------R~--~~   65 (312)
T 2gu2_A            9 PIKKIAIFGGTHGNELTGVFLVTHWLKNG------------AEVHRAGLEVKPFITNPRAVEKCT---------RY--ID   65 (312)
T ss_dssp             CCCEEEEEECSSTTCHHHHHHHHHHHHCG------------GGGCCTTCEEEEEESCHHHHHTTS---------SC--SS
T ss_pred             CCCEEEEECCCCCCcHHHHHHHHHHHhCc------------hhhccCeEEEEEeCCCHHHHHhCC---------CC--cC
Confidence            46899999999999999999776554321            13455679999999 999998732         33  57


Q ss_pred             EeeccCCCCCC-CCCC---CCCChHHHHHHHHHh
Q psy8322         393 ISLFLPFPVTK-NKPA---LTPDTDVFLHLASTY  422 (651)
Q Consensus       393 vdlnrnf~~~~-~~~~---~~~~~~~f~~l~~~~  422 (651)
                      .||||.||-.. +...   .+++.+.-..|...+
T Consensus        66 ~DLNR~Fpg~~~g~~~~~~~~~e~r~A~~l~~~~   99 (312)
T 2gu2_A           66 CDLNRVFDLENLSKEMSEDLPYEVRRAQEINHLF   99 (312)
T ss_dssp             SCGGGCCSHHHHTCCCCTTSCHHHHHHHHHHHHH
T ss_pred             CCcccCCCCcccCCccccCCCHHHHHHHHHHHHH
Confidence            89999998431 1111   145555555555544

>3nh4_A Aspartoacylase-2; mercapturates, hydrolase; 2.00A {Mus musculus} SCOP: c.56.5.0 PDB: 3nh5_A 3nfz_A 3nh8_A*

Probab=97.51  E-value=2.4e-05  Score=81.33  Aligned_cols=67  Identities=21%  Similarity=0.192  Sum_probs=50.8

Q ss_pred             CCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEec-cCcCCceeeecccccCCCCCCCce
Q psy8322         313 LGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPN-LNPDGSELAVEGNCRSGRGRTPPF  391 (651)
Q Consensus       313 ~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~-~NpDG~~~~~~~~~~~~kgr~~~~  391 (651)
                      ...|.|++.||+||+|..|.+++..+++...           . ...-.+.++|+ +||.|+....         |..  
T Consensus        18 ~~gp~v~i~agiHGnE~~Gi~~~~~l~~~~~-----------~-~~~g~v~~~p~~~Np~a~~~~~---------R~~--   74 (327)
T 3nh4_A           18 EPLLRVAVTGGTHGNEMCGVYLARYWLQNPG-----------E-LQRPSFSAMPVLANPAATAACC---------RYL--   74 (327)
T ss_dssp             CCCCSEEEEECSSTTCHHHHHHHHHHHHCGG-----------G-GEETTEEEEEEESCHHHHHHTS---------SCS--
T ss_pred             CCCCEEEEEecccCCchHHHHHHHHHHhcch-----------h-hcCCcEEEEEeccCHHHHHhcC---------CCC--
Confidence            3569999999999999999999888887421           1 12345888998 9999988643         322  


Q ss_pred             eEeeccCCCCC
Q psy8322         392 LISLFLPFPVT  402 (651)
Q Consensus       392 gvdlnrnf~~~  402 (651)
                      ..||||.||-.
T Consensus        75 ~~DLNR~Fpg~   85 (327)
T 3nh4_A           75 DRDLNRSCTLT   85 (327)
T ss_dssp             SSCGGGCCSHH
T ss_pred             CCCcccCCCCc
Confidence            47999999854

>1nkg_A Rhamnogalacturonase B; polysaccharide lyase, carbohydrate active enzyme, pectin, LY; 1.50A {Aspergillus aculeatus} SCOP: b.3.1.2 b.18.1.25 b.30.5.10 PDB: 2xhn_A* 3njv_A* 3njx_A

Probab=97.42  E-value=0.00027  Score=77.31  Aligned_cols=76  Identities=12%  Similarity=0.130  Sum_probs=62.0

Q ss_pred             cceeEEEEcCCCCcccceEEEE---eeeeeeeeeCCCeeE-EeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEEEEEE
Q psy8322         508 RGVKGLVLDETGSRLANVSISL---AYKNVSFMSSQRGEY-WRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVL  583 (651)
Q Consensus       508 ~~i~G~V~D~~g~pi~~A~V~i---~~~~~~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L  583 (651)
                      ..|+|+|+   |.|.....|..   ++....+.||++|.| +.+++||+|+|++...|+...+..|+|..+....+++.+
T Consensus       258 GtVsG~V~---G~~~~~~avv~~~~k~~qywt~td~~G~FtI~~V~pGtY~L~a~~~G~~~~~~~VtV~aG~t~~l~i~~  334 (508)
T 1nkg_A          258 GKVAGTAS---GADSSMDWVVHWYNDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATSSVTVSAGSTTTKNISG  334 (508)
T ss_dssp             BEEEEEEE---SSCTTSCEEEEEECSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEEEEEECTTCEEECCEEC
T ss_pred             cEEEEEEc---CccCCceEEEEEcCCCceeEEEECCCCcEEeCCcCCceEEEEEEECceEEEEeEEEEcCCCeeEeeeEE
Confidence            35999998   66644344555   456678999999999 668999999999999999888889999988887788888


Q ss_pred             eee
Q psy8322         584 ESL  586 (651)
Q Consensus       584 ~~~  586 (651)
                      ++.
T Consensus       335 ~~~  337 (508)
T 1nkg_A          335 SVK  337 (508)
T ss_dssp             CCC
T ss_pred             ecC
Confidence            765

>3e8v_A Possible transglutaminase-family protein; structural genomics, unknown function, PSI-2, protein structure initiative; 2.40A {Bacteroides fragilis nctc 9343}

Probab=96.85  E-value=0.01  Score=48.01  Aligned_cols=72  Identities=17%  Similarity=0.149  Sum_probs=52.8

Q ss_pred             eeEEEEcCCCCcccceEEEEeee-------eeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEEEEE
Q psy8322         510 VKGLVLDETGSRLANVSISLAYK-------NVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAV  582 (651)
Q Consensus       510 i~G~V~D~~g~pi~~A~V~i~~~-------~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~  582 (651)
                      +.-+|+|.+|+|+++|.|.++=-       .....||++|.|.+..-.|.-.|.++..|.--..+ +  ..++...+++.
T Consensus         3 ~~v~V~d~~GkPV~gA~Vefe~yNyae~~~~~~~~TD~~G~~s~~~G~Gd~~v~A~k~G~~g~a~-l--~~~~~~~~~i~   79 (82)
T 3e8v_A            3 GSVLVTDAEGQPVADATVEFKVYNYAEFYTVATKHTDRSGHASLTAGKGDMLVWASKDGRFGYSK-L--SFGKDNELKIT   79 (82)
T ss_dssp             EEEEEECTTSCBCTTCEEEEEEEETTEEEEEEEEECCTTSEEEEECCSEEEEEEEEETTEEEEEE-E--EETTBCEEEEE
T ss_pred             EEEEEEcCCCCCCCCCEEEEEEEEchheeEEEEEEECCCceEEEEEcCCceEEEeccCCEEEEEE-e--ccCCCceEEEE
Confidence            56789999999999999998632       24668999999988888888888889888743221 2  22334446665


Q ss_pred             Ee
Q psy8322         583 LE  584 (651)
Q Consensus       583 L~  584 (651)
                      |+
T Consensus        80 L~   81 (82)
T 3e8v_A           80 LD   81 (82)
T ss_dssp             CC
T ss_pred             eC
Confidence            54

>2xsu_A Catechol 1,2 dioxygenase; oxidoreductase; HET: PIE; 1.60A {Acinetobacter radioresistens} PDB: 2xsr_A* 2xsv_A*

Probab=96.43  E-value=0.0057  Score=62.48  Aligned_cols=65  Identities=22%  Similarity=0.307  Sum_probs=52.5

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceEE---------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIYF---------------  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y~---------------  554 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                  -...||.+|.| +..+.||.|.               
T Consensus       138 ~v~G~V~D~~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Y~ip~dGp~G~lL~~~g  217 (312)
T 2xsu_A          138 IIEGTVTDTEGNIIEGAKVEVWHANSLGNYSFFDKSQSDFNLRRTILTDVNGKYVALTTMPVGYGCPPEGTTQALLNKLG  217 (312)
T ss_dssp             EEEEEEEETTSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEECCTTSHHHHHHHHTT
T ss_pred             EEEEEEECCCCCCCCCCEEEEEecCCCCcccCCCCCCCCCCCeeEEEeCCCceEEEEEECcCcccCCCCCcHHHHHHHhh
Confidence            4899999999999999999995311                  14679999999 7789999997               


Q ss_pred             ----------EEEEEeeeeeEEEEEEeeC
Q psy8322         555 ----------IEASKEGYELFRDRIKIPE  573 (651)
Q Consensus       555 ----------l~vs~~Gy~~~~~~v~v~~  573 (651)
                                +.|++.||...+.++-...
T Consensus       218 rh~~RpaHIH~~V~a~G~~~L~Tqlyf~~  246 (312)
T 2xsu_A          218 RHGNRPSHVHYFVSAPGYRKLTTQFNIEG  246 (312)
T ss_dssp             CCCEECCEEEEEEECTTBCCEEEEEEETT
T ss_pred             ccCCCCceEEEEEEcCCccceEEEEecCC
Confidence                      6888888877666666553

>2boy_A 3-chlorocatechol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: BHO LPP; 1.9A {Rhodococcus opacus}

Probab=95.92  E-value=0.014  Score=58.02  Aligned_cols=47  Identities=26%  Similarity=0.475  Sum_probs=38.4

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIYFI  555 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y~l  555 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                  -...||++|.| +..+.||.|.+
T Consensus       104 ~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~rGr~~Td~~G~y~F~TI~Pg~Y~~  169 (254)
T 2boy_A          104 IFRGEVVDQEGAPLADVLLDMWQADAAGEYSFINPTLPDYLFRGKIRTDENGRFTLRTIVPAPYEI  169 (254)
T ss_dssp             EEEEEEECTTSCBCCSCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred             EEEEEEECCCCCCCCCCEEEEEcCCCCCccCCcCCCCCCCCCeeEEEeCCCceEEEEEECCccccC
Confidence            4899999999999999999994211                  14678999999 77789988754

>2azq_A Catechol 1,2-dioxygenase; CTD, lipid, isozyme, intradiol, oxido; HET: PCF; 2.65A {Pseudomonas putida}

Probab=95.69  E-value=0.021  Score=58.31  Aligned_cols=64  Identities=25%  Similarity=0.358  Sum_probs=50.3

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceEE---------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIYF---------------  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y~---------------  554 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                  -...||.+|.| +..+.||.|.               
T Consensus       134 ~v~G~V~D~~G~Pv~gA~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Y~~p~dGp~g~lL~~~g  213 (311)
T 2azq_A          134 FLQGQVFDANGKPLAGATVDLWHANTQGTYSYFDSTQSEFNLRRRIITDAEGRYRARSIVPSGYGCDPQGPTQECLDLLG  213 (311)
T ss_dssp             EEEEEEECSSSCBCTTCEEEEECCCTTSCCBTTBTTSCTTTTEEEEECCTTCEEEEEEECCCCEECCTTSHHHHHHHHHT
T ss_pred             EEEEEEEcCCCCCCCCceeEEEecCCCCccCCCCCCCCCCCCeeEEEeCCCceEEEEEEcCCCcCCCCCCcHHHHHHhhh
Confidence            4899999999999999999984211                  14678999999 7789999887               


Q ss_pred             ----------EEEEEeeeeeEEEEEEee
Q psy8322         555 ----------IEASKEGYELFRDRIKIP  572 (651)
Q Consensus       555 ----------l~vs~~Gy~~~~~~v~v~  572 (651)
                                +.|++.||...+-++-..
T Consensus       214 rh~~RpaHIHf~V~a~G~~~L~Tqlyf~  241 (311)
T 2azq_A          214 RHGQRPAHVHFFISAFGHRHLTTQINFA  241 (311)
T ss_dssp             CCCEECCEEEEEEECTTBCCEEEEEEET
T ss_pred             ccCCCCceEEEEEEcCCcceEEEEEecC
Confidence                      677888886665555554

>3th1_A Chlorocatechol 1,2-dioxygenase; catechol 1,2-dioxygenase family, oxidoreductase, iron bindin; HET: 3PH GOL; 3.40A {Pseudomonas putida}

Probab=95.62  E-value=0.023  Score=56.46  Aligned_cols=64  Identities=25%  Similarity=0.409  Sum_probs=47.8

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee------------------eeeeeeCCCeeE-EeeccCceEE---------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK------------------NVSFMSSQRGEY-WRVLMPGIYF---------------  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~------------------~~~~~Td~~G~f-~~~l~~g~y~---------------  554 (651)
                      .|+|+|+|.+|+||++|.|.|=-.                  .-...||++|.| +..+.||.|.               
T Consensus       101 ~v~G~V~D~~G~Pv~gA~VeiWqad~~G~Y~~~~~~~~~~~~RG~~~TD~~G~y~F~TI~P~~Ypip~dGp~g~ll~~~g  180 (260)
T 3th1_A          101 IIRGTVRSDTGELLAGAVIDVWHSTPDGLYSGIHDNIPVDYYRGKLVTDSQGNYRVRTTMPVPYQIPYEGPTGRLLGHLG  180 (260)
T ss_dssp             EEEEEEEETTSCBCSSCEEEEEECCTTSCCTTTSTTCCTTBTEEEEECCTTSEEEEEEECCCCEECCCSSHHHHHHHHTT
T ss_pred             EEEEEEECCCCCCcCCcEEEEEecCCCCcccCcCCCCCCCCCceEEEeCCCCEEEEEEECCCCCCCCCCCcHHHHHHhcC
Confidence            489999999999999999998311                  124679999999 7778887663               


Q ss_pred             ----------EEEEEeeeeeEEEEEEee
Q psy8322         555 ----------IEASKEGYELFRDRIKIP  572 (651)
Q Consensus       555 ----------l~vs~~Gy~~~~~~v~v~  572 (651)
                                +.|++.||+..+.++-..
T Consensus       181 r~~~RpaHIHf~v~a~g~~~L~Tqiyf~  208 (260)
T 3th1_A          181 SHTWRPAHVHFKVRKDGFEPLTTQYYFE  208 (260)
T ss_dssp             CCSEECCEEEEEEECTTSCCEEEEEEET
T ss_pred             CCCCCCCeEEEEEEeCCcCeeEEeEecC
Confidence                      557777776655555443

>1tmx_A Hydroxyquinol 1,2-dioxygenase; beta barrel, oxidoreductase; HET: HGX; 1.75A {Pimelobacter simplex}

Probab=95.12  E-value=0.045  Score=55.41  Aligned_cols=46  Identities=24%  Similarity=0.418  Sum_probs=38.0

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee-----------------eeeeeCCCeeE-EeeccCceEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN-----------------VSFMSSQRGEY-WRVLMPGIYF  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~-----------------~~~~Td~~G~f-~~~l~~g~y~  554 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                 -...||++|.| +..+.||.|.
T Consensus       135 ~v~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~~~~~~~~~rGr~~TD~~G~y~F~TI~Pg~Yp  198 (293)
T 1tmx_A          135 WVEGTVTDTDGNPVPDARIEVWEADDDGFYDVQYDDDRTAARAHLLSGPDGGYAFWAITPTPYP  198 (293)
T ss_dssp             EEEEEEEETTSCBCTTCEEEEECCCTTSCCGGGSSSCCCCSEEEEECCTTSEEEEEEECCCCEE
T ss_pred             EEEEEEECCCCCCCCCceeEEEecCCCCcccCCccCCCCCceeEEEeCCCceEEEEEECCCccc
Confidence            4899999999999999999984211                 14678999999 7789999886

>1dmh_A 1,2-CTD, catechol 1,2-dioxygenase; aromatic hydrocarbon degradation, alpha/beta FO metalloenzyme, substrate, oxidoreductase; HET: LIO; 1.70A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1dlq_A* 1dlm_A* 1dlt_A*

Probab=95.04  E-value=0.041  Score=56.15  Aligned_cols=64  Identities=23%  Similarity=0.430  Sum_probs=48.7

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee--------------------eeeeeCCCeeE-EeeccCceEEE------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN--------------------VSFMSSQRGEY-WRVLMPGIYFI------------  555 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~--------------------~~~~Td~~G~f-~~~l~~g~y~l------------  555 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                    -...||.+|.| +..+.||.|.+            
T Consensus       135 ~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp~p~dgp~g~lL~~  214 (311)
T 1dmh_A          135 ILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGCPPEGPTQQLLNQ  214 (311)
T ss_dssp             EEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEECCTTSHHHHHHHH
T ss_pred             EEEEEEEcCCCCCCCCcEEEEEccCCCcccCCcCCcccCCCCCCeeEEEeCCCceEEEEEEcCCcccCCCCCcHHHHHHh
Confidence            4899999999999999999984211                    14678999999 77899998853            


Q ss_pred             -------------EEEEeeeeeEEEEEEee
Q psy8322         556 -------------EASKEGYELFRDRIKIP  572 (651)
Q Consensus       556 -------------~vs~~Gy~~~~~~v~v~  572 (651)
                                   .|++.||...+-++-..
T Consensus       215 ~grh~~RpaHIHf~V~a~G~~~L~Tqlyf~  244 (311)
T 1dmh_A          215 LGRHGNRPAHIHYFVSADGHRKLTTQINVA  244 (311)
T ss_dssp             TTCCCEECSEEEEEEECTTBCCEEEEEEET
T ss_pred             cccCCCCCceEEEEEecCCcceEEEeEecC
Confidence                         56777776655555554

>3n9t_A PNPC; phospholipid binds, N-terminal helix tunnel, oxidoreductase; HET: HGX FLC; 2.00A {Pseudomonas putida}

Probab=94.95  E-value=0.039  Score=55.75  Aligned_cols=47  Identities=23%  Similarity=0.296  Sum_probs=38.3

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee------------------eeeeeeCCCeeE-EeeccCceEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK------------------NVSFMSSQRGEY-WRVLMPGIYFI  555 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~------------------~~~~~Td~~G~f-~~~l~~g~y~l  555 (651)
                      .|+|+|+|.+|+||++|.|.|=-.                  .-...||.+|.| +..+.||.|.+
T Consensus       131 ~l~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~lRGr~~TD~~G~y~F~TI~Pg~Yp~  196 (290)
T 3n9t_A          131 LVYGRVLDVQGRPVVGAVLDVWQTADNGMYSGQDPDQPFGNLRGRYRSDNDGCFAIQTTVPVCYPI  196 (290)
T ss_dssp             EEEEEEEETTSCBCSSCEEEEECCCTTSCCTTTSTTSCTTTTEEEEECCTTSEEEEEEECCCCEEC
T ss_pred             EEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCCCCCCCceeEEEeCCCceEEEEEeCCCCcCC
Confidence            489999999999999999998321                  114579999999 77899998874

>3o5u_A Chlorocatechol 1,2-dioxygenase; beta barrel,oxidoreductase, oxidoreductase; HET: MYY DHB; 2.35A {Rhodococcus opacus} PDB: 3o32_A* 1s9a_A* 3o6j_A* 3o6r_A*

Probab=94.78  E-value=0.06  Score=53.44  Aligned_cols=46  Identities=17%  Similarity=0.285  Sum_probs=36.9

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee-------------------eeeeeeCCCeeE-EeeccCceEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK-------------------NVSFMSSQRGEY-WRVLMPGIYF  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~-------------------~~~~~Td~~G~f-~~~l~~g~y~  554 (651)
                      .|+|+|+|.+|+||++|.|.|=-.                   .-...||.+|.| +..+.||.|-
T Consensus       105 ~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~~~RGr~~TD~~G~y~F~TI~Pg~Yp  170 (257)
T 3o5u_A          105 RFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYE  170 (257)
T ss_dssp             EEEEEEECTTCCBCTTCEEEEECCCTTSCCTTSCTTSCSSCTTEEEECCCTTSEEEEEEECCCCEE
T ss_pred             EEEEEEECCCCCCCCCcEEEEEecCCCCCCCCcCCCCCcccCceeEEEeCCCceEEEEEECCCCcC
Confidence            489999999999999999998321                   114578999999 7778888874

>3kcp_A Cellulosomal-scaffolding protein A; dockerin, X-module, carbohydrate metabolism, cell WALL biogenesis/degradation; 1.94A {Clostridium thermocellum atcc 27405} PDB: 3p0d_C 4fl4_C 2b59_B

Probab=94.70  E-value=0.027  Score=57.20  Aligned_cols=61  Identities=13%  Similarity=0.126  Sum_probs=50.2

Q ss_pred             ceeEEEEcC-------CCCcccceEEEEeeeeeeeeeCCCeeE-EeeccCce--EEEEEEEeeeeeEEEEE
Q psy8322         509 GVKGLVLDE-------TGSRLANVSISLAYKNVSFMSSQRGEY-WRVLMPGI--YFIEASKEGYELFRDRI  569 (651)
Q Consensus       509 ~i~G~V~D~-------~g~pi~~A~V~i~~~~~~~~Td~~G~f-~~~l~~g~--y~l~vs~~Gy~~~~~~v  569 (651)
                      .|+|-|..+       ....-.|++|.+.|+...++||.+|.| +..+|+|.  |+|.++..||-+.+++.
T Consensus       159 ~vsGYi~~~~~~~~~~~~~~~~G~~V~i~gt~~sa~tD~~G~f~I~~vp~~~~~ytl~i~~~g~l~~~i~~  229 (321)
T 3kcp_A          159 KVSGYILPDFSFDATVAPLVKAGFKVEIVGTELYAVTDANGYFEITGVPANASGYTLKISRATYLDRVIAN  229 (321)
T ss_dssp             EEEEEEEESSCCCTTTHHHHHSCCEEEETTSSCEEECCTTSEEEEEEECCEEEEEEEEEECTEECCEEEEE
T ss_pred             eEEEEEccccccccccchhccCCcEEEEEeccceeEECCCceEEEeccCCCCccEEEEEeecCceeeeeee
Confidence            477777652       122557899999999999999999999 66899998  99999999998887753

>3hhy_A 1,2-CTD, catechol 1,2-dioxygenase; beta-sandwich, aromatic hydrocarbons catabolism, dioxygenase metal-binding, oxidoreductase; HET: 6PL; 1.55A {Rhodococcus opacus} PDB: 3hhx_A* 3hgi_A* 3hj8_A* 3hjq_A* 3hjs_A* 3i4v_A* 3hkp_A* 3i51_A* 3i4y_A*

Probab=94.28  E-value=0.11  Score=52.18  Aligned_cols=46  Identities=24%  Similarity=0.388  Sum_probs=37.1

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCCeeE-EeeccCceEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQRGEY-WRVLMPGIYF  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~G~f-~~~l~~g~y~  554 (651)
                      .|.|+|+|.+|+||++|.|.|=-.+                  -...||.+|.| +..+.||.|.
T Consensus       133 ~l~G~V~D~~G~Pv~~A~VeiWqada~G~Ys~~~~~~~~~~lRGr~~TD~dG~y~F~TI~Pg~Yp  197 (280)
T 3hhy_A          133 VFSGQVTDLDGNGLAGAKVELWHADNDGYYSQFAPHLPEWNLRGTIIADEEGRYEITTIQPAPYQ  197 (280)
T ss_dssp             EEEEEEECTTSCBCSSCEEEEECCCTTSCCTTSSTTSCTTTTEEEEECCTTSEEEEEEECCCCEE
T ss_pred             EEEEEEECCCCCCCCCcEEEEEecCCCCCCCCCCCCCCCCcceEEEEeCCCceEEEEEECCcCcC
Confidence            4899999999999999999984211                  14579999999 7778888774

>2bum_B Protocatechuate 3,4-dioxygenase beta chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_B 1eoa_B 1eob_B* 1eoc_B* 1eo9_B 2buq_B 2bur_B* 2bux_B 2buy_B 2buz_B* 2bv0_B* 2buu_B* 2but_B* 2buv_B* 2buw_B*

Probab=94.26  E-value=0.096  Score=51.59  Aligned_cols=47  Identities=28%  Similarity=0.446  Sum_probs=38.3

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee-----------------------eeeeeCCCeeE-EeeccCceEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN-----------------------VSFMSSQRGEY-WRVLMPGIYFI  555 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~-----------------------~~~~Td~~G~f-~~~l~~g~y~l  555 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                       -...||++|.| +..+.||.|.+
T Consensus        80 ~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~  150 (241)
T 2bum_B           80 IVHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPW  150 (241)
T ss_dssp             EEEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred             EEEEEEECCCCCCCCCcEEEEEecCCCceeCCCCCCcccccCCCccceeEEEeCCCceEEEEEecCCcccc
Confidence            4899999999999999999984210                       13578999999 77899999875

>2bum_A Protocatechuate 3,4-dioxygenase alpha chain; oxidoreductase, aromatic degradation, non-heme iron, beta-SA mixed alpha/beta structure; 1.80A {Acinetobacter SP} SCOP: b.3.6.1 PDB: 1eo2_A 1eob_A* 1eoc_A* 1eoa_A 2buq_A 2bur_A* 2but_A 2buu_A* 2buv_A* 2buw_A* 1eo9_A 2bux_A 2buy_A 2buz_A* 2bv0_A*

Probab=94.00  E-value=0.047  Score=52.71  Aligned_cols=47  Identities=21%  Similarity=0.236  Sum_probs=37.0

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee-----------------------eeeee-CCCeeE-EeeccCceEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN-----------------------VSFMS-SQRGEY-WRVLMPGIYFI  555 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~-----------------------~~~~T-d~~G~f-~~~l~~g~y~l  555 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                       -...| |++|.| +..+.||.|..
T Consensus        54 ~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~~~~~~f~~rGr~~T~d~~G~y~F~TI~Pg~yp~  125 (209)
T 2bum_A           54 RLEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAVPG  125 (209)
T ss_dssp             EEEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCSCCCTTCCCEEEEECCTTTCCEEEEEECCCCCBC
T ss_pred             EEEEEEECCCCCCCCCCEEEEEecCCCCcccCccCCcccccCCCccceeEEeeeCCCcEEEEEEEccCcccC
Confidence            4899999999999999999983110                       13567 999999 77788887753

>3t63_A 3,4-PCD, protocatechuate 3,4-dioxygenase alpha chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 1ykl_A* 1ykm_A* 1ykn_A* 1yko_A* 1ykp_A* 2pcd_A 1ykk_A* 3lmx_A* 3lxv_A* 3mfl_A* 3mi1_A* 3mi5_A* 3lkt_A* 3mv6_A* 3pca_A* 3pcb_A* 3pcc_A* 3pcd_A 3pce_A* 3pcf_A* ...

Probab=93.97  E-value=0.089  Score=50.35  Aligned_cols=47  Identities=17%  Similarity=0.227  Sum_probs=38.0

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------------------eeeeeCCC-eeE-EeeccCceEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------------------VSFMSSQR-GEY-WRVLMPGIYFI  555 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------------------~~~~Td~~-G~f-~~~l~~g~y~l  555 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                  -...||.+ |.| +..+.||.|..
T Consensus        50 ~v~G~V~D~~G~Pv~~A~VeiWqada~G~Y~~~~~~~~~f~~rGr~~TD~~~G~~~F~TI~Pg~Y~~  116 (200)
T 3t63_A           50 LLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVNN  116 (200)
T ss_dssp             EEEECEECTTSCBCSSCEEEEEECCTTSCCCCBCCTTSSBCSEEEEECCSSCCSEEEEEECCCCEEC
T ss_pred             EEEEEEECCCCCCCCCCEEEEEccCCCCCcCCCCCCCCCccccceEecCCCCCEEEEEEECCcCcCC
Confidence            4899999999999999999984211                  14578998 999 77899998865

>3t63_M 3,4-PCD, protocatechuate 3,4-dioxygenase beta chain; iron III dependent non-heme intradiol dioxygenase, oxidoredu; HET: GOL; 1.54A {Pseudomonas putida} PDB: 3mi1_M* 3mv4_M* 3mi5_M* 3mfl_M* 3mv6_M* 3t67_M 3pca_M* 3pcb_M* 2pcd_M* 3pce_M* 3pcf_M* 3pcc_M* 3pch_M* 3pci_M* 3pcj_M* 3pck_M* 3pcl_M* 3pcm_M* 3pcn_M* 3pcg_M ...

Probab=93.55  E-value=0.094  Score=51.42  Aligned_cols=47  Identities=26%  Similarity=0.370  Sum_probs=38.0

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee-----------------------eeeeeCCCeeE-EeeccCceEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN-----------------------VSFMSSQRGEY-WRVLMPGIYFI  555 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~-----------------------~~~~Td~~G~f-~~~l~~g~y~l  555 (651)
                      .|.|+|+|.+|+||++|.|.|=-.+                       -...||.+|.| +..+.||.|.+
T Consensus        79 ~l~G~V~D~~G~Pv~~A~VEiWqada~G~Y~~~~d~~~~~~~~~f~~rGr~~TD~~G~y~F~TI~Pg~Yp~  149 (238)
T 3t63_M           79 IVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPAPW  149 (238)
T ss_dssp             EEEEEEEETTSCBCTTCEEEEEECCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred             EEEEEEECCCCCCCCCCEEEEEecCCCCCCCCccccccccCCCCcCceeEEEECCCceEEEEEECCcCccC
Confidence            4899999999999999999983110                       13578999999 77899998865

>3irp_X URO-adherence factor A; DEV-IGG fold, cell WALL, hemagglutinin, peptidoglycan-anchor secreted, virulence, cell adhesion; 1.50A {Staphylococcus saprophyticus subsp} PDB: 3irz_A 3is0_X 3is1_X

Probab=92.40  E-value=0.067  Score=57.42  Aligned_cols=56  Identities=23%  Similarity=0.401  Sum_probs=43.8

Q ss_pred             ceeEEEEc---------CCCCcccceEEEEeeee----eeeeeCCCeeE-EeeccCceEEEEEEEe-eeee
Q psy8322         509 GVKGLVLD---------ETGSRLANVSISLAYKN----VSFMSSQRGEY-WRVLMPGIYFIEASKE-GYEL  564 (651)
Q Consensus       509 ~i~G~V~D---------~~g~pi~~A~V~i~~~~----~~~~Td~~G~f-~~~l~~g~y~l~vs~~-Gy~~  564 (651)
                      .|.|.|..         +...||+||.|.|.+..    ..++||.+|.| +..|++|.|+|++..+ ||..
T Consensus       307 ~igg~Vw~D~n~nG~~D~~e~gl~gv~v~L~d~~G~~v~tttTd~~G~Y~F~~L~~G~Y~V~~~~P~Gy~~  377 (429)
T 3irp_X          307 GFGGYVWFDKNNDGVQNDSNAAAAGITVNLLDPTGIRLATTTTDITGHYNFDNLTNGNYLVEFVMPEGYIP  377 (429)
T ss_dssp             EEEEEEEECTTSSSSSCCSSCBCTTCEEEEECTTSCEEEEEECCTTSEEEEEEEESEEEEEEECCCTTEEE
T ss_pred             EEccEEEEeCCCCCCcCcCCCCcCCeEEEEEcCCCCEEEEEEeCCCCeEEeCCCCCCcEEEEEECCCCCEE
Confidence            47788752         33459999999997522    45679999999 7789999999999876 8854

>3g3l_A Putative uncharacterized membrane-associated PROT; YP_211325.1, putative membrane-associated protein of unknown function; 2.20A {Bacteroides fragilis nctc 9343}

Probab=90.19  E-value=0.23  Score=46.78  Aligned_cols=62  Identities=21%  Similarity=0.329  Sum_probs=51.5

Q ss_pred             cceeEEEEc-CCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeC
Q psy8322         508 RGVKGLVLD-ETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPE  573 (651)
Q Consensus       508 ~~i~G~V~D-~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~  573 (651)
                      .-|-|.|+| .+|+.|.-|+|.|.+...+..-|+.|.|..    ..|.+.|++.||-+..++|-+++
T Consensus        15 YyIaGtiTdatTGq~LttAtVTlgg~sVt~~fN~~v~yka----egyslvVsa~gYy~v~kqVYLnq   77 (327)
T 3g3l_A           15 YYIAGTITDATTGQELTTAKVTLGDKSVTSSFNEQVNYKA----EGYALVVSADGYYPVKRQVYLNQ   77 (327)
T ss_dssp             EEEEEEEEETTTCCBCTTCEEEETTEEECSEEEEEECCCT----TCEEEEEECTTBCCEEEEECCCC
T ss_pred             EEEEEEeeeccccceEEEEEEEECCeEEeeeccceeeEee----cCceEEEEecCceeeEEEEEccc
Confidence            358999999 889999999999988777777777788742    23999999999999998887753

>1ti6_B Pyrogallol hydroxytransferase small subunit; molybdenum binding enzyme, MGD-cofactors, DMSO-reductase family, 4Fe-4S-cluster; HET: MGD BTT; 2.00A {Pelobacter acidigallici} SCOP: b.3.5.1 d.58.1.5 PDB: 1ti2_B* 1ti4_B* 1vld_N* 1vle_N* 1vlf_N*

Probab=88.88  E-value=1.8  Score=43.45  Aligned_cols=58  Identities=24%  Similarity=0.391  Sum_probs=44.9

Q ss_pred             CCCCcccceEEEEee--ee-eeeeeCCCeeE-EeeccCceEEEEEEEeeeeeEEEEEEeeCCCc
Q psy8322         517 ETGSRLANVSISLAY--KN-VSFMSSQRGEY-WRVLMPGIYFIEASKEGYELFRDRIKIPESTS  576 (651)
Q Consensus       517 ~~g~pi~~A~V~i~~--~~-~~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~  576 (651)
                      .+++.++++.|.+..  .+ ....||..|.| +..|++|.|+|.|.+.|| +...++.+ .+..
T Consensus       205 a~~~~~~~~~vpl~~~~~~va~~~~d~~G~f~~~~l~~G~y~v~v~a~g~-p~~~~~~~-~~~~  266 (274)
T 1ti6_B          205 VQGDCFEGAKVVLKSGGKEVASAETNFFGEFKFDALDNGEYTVEIDADGK-SYSDTVVI-DDKS  266 (274)
T ss_dssp             ETTEECTTCEEEEEETTEEEEEEECCTTSEEEEEEECSEEEEEEEEETTE-EEEEEEEE-SSSC
T ss_pred             cccccccCCEEEEEcCCcEEEEEeecCcCcEEEeccCCcceEEEEecCCC-CccceeEE-ccCc
Confidence            456677888888872  22 25678999999 556999999999999999 98888877 4443

>1xpn_A Hypothetical protein PA1324; B-barrel, structural genomics, northeast structural genomics consortium, NESG, protein structure initiative; NMR {Pseudomonas aeruginosa} SCOP: b.3.7.1

Probab=86.60  E-value=1.5  Score=40.48  Aligned_cols=26  Identities=19%  Similarity=0.455  Sum_probs=22.1

Q ss_pred             eeeeeeCCCeeE-EeeccCceEEEEEE
Q psy8322         533 NVSFMSSQRGEY-WRVLMPGIYFIEAS  558 (651)
Q Consensus       533 ~~~~~Td~~G~f-~~~l~~g~y~l~vs  558 (651)
                      ...++||.+|.| +..||+|+|-|...
T Consensus       108 ~r~t~~D~~G~F~F~~Lp~G~Yyl~a~  134 (170)
T 1xpn_A          108 VREATTDQNGRFDFDHIPNGTYYISSE  134 (170)
T ss_dssp             CEEEEECSSCEEEECSCCSEEEEEEEE
T ss_pred             eeEEEecCCCcEEecCCCCccEEEEEE
Confidence            357889999999 88999999988763

>4eiu_A Uncharacterized hypothetical protein; PF12866 family protein, DUF3823, structural genomics, joint for structural genomics, JCSG; HET: PGE; 1.90A {Bacteroides uniformis}

Probab=84.16  E-value=3.6  Score=40.16  Aligned_cols=52  Identities=21%  Similarity=0.376  Sum_probs=40.4

Q ss_pred             ccceeEEEEc-CCCCccc------ceEEEEeeeee--------eeeeCCCeeEE-eeccCceEEEEEE
Q psy8322         507 HRGVKGLVLD-ETGSRLA------NVSISLAYKNV--------SFMSSQRGEYW-RVLMPGIYFIEAS  558 (651)
Q Consensus       507 ~~~i~G~V~D-~~g~pi~------~A~V~i~~~~~--------~~~Td~~G~f~-~~l~~g~y~l~vs  558 (651)
                      ...++|+|+| ++|+||.      ++.|.+.....        ......||.|. ..|=.|.|.|++.
T Consensus         9 ~s~l~G~ivd~~tGE~i~~~~g~~gv~i~l~E~g~~~~~~~~~~~~v~~DGtf~Nt~lF~G~Yki~~~   76 (249)
T 4eiu_A            9 SETIWGEVVDEATGKRVLTDQGSEGIRVRLTELSWGDNVQHNPDFYCMMDGTFQNTKIFKGEYNVRID   76 (249)
T ss_dssp             CEEEEEEEEETTTCCBCCCCSSTTSCEEEEEECCSSCCBCCSCCEECCTTSEEEEEEECSEEEEEEEE
T ss_pred             cceeEEEEEECCCCCEeeeccCCCceEEEEEecccccCCCccCCEEECCCCceeeeeEEcceeEEEeC
Confidence            3569999999 7999885      36777754321        34678899996 7889999999997

>3qva_A Transthyretin-like protein; transthyretin-related protein, 5-hydroxyisourate hydrolase,; HET: PO4; 1.75A {Klebsiella pneumoniae subsp}

Probab=84.03  E-value=2.1  Score=36.99  Aligned_cols=54  Identities=22%  Similarity=0.364  Sum_probs=43.1

Q ss_pred             ceeEEEEc-CCCCcccceEEEEeee---eeeeeeCCCeeE-Ee---eccCceEEEEEEEeee
Q psy8322         509 GVKGLVLD-ETGSRLANVSISLAYK---NVSFMSSQRGEY-WR---VLMPGIYFIEASKEGY  562 (651)
Q Consensus       509 ~i~G~V~D-~~g~pi~~A~V~i~~~---~~~~~Td~~G~f-~~---~l~~g~y~l~vs~~Gy  562 (651)
                      .|+-.|.| ..|.|-+|+.|.+...   -...+||.||+. .+   .+.+|.|+|++..-.|
T Consensus        11 ~lstHVLDt~~G~PAagv~V~L~~~~~~l~~~~Tn~DGR~~~l~~~~~~~G~Y~L~F~tg~Y   72 (116)
T 3qva_A           11 TLSTHILDISTGTPAEGVTVSLSREGETLANLVTNAQGRIATFSAAPLPAGRYCLTAETGAW   72 (116)
T ss_dssp             CEEEEEEETTTTEECTTCEEEEEETTEEEEEEECCTTSEECCSCSSCBCSSEEEEEECHHHH
T ss_pred             CeeeEEeecCCCcCCCCCEEEEEEccEeEEEeccCCCCCccccccccCCCceEEEEEeHHHH
Confidence            48899999 7899999999999642   235689999997 22   3678999999966655

>3qec_A Putative carbohydrate binding protein; suramin binding, heparin binding, possible carbohydrate TRAN biofilm formation; HET: PGE; 2.61A {Pseudomonas aeruginosa}

Probab=83.22  E-value=2.8  Score=37.92  Aligned_cols=26  Identities=19%  Similarity=0.456  Sum_probs=21.8

Q ss_pred             eeeeeCCCeeE-EeeccCceEEEEEEE
Q psy8322         534 VSFMSSQRGEY-WRVLMPGIYFIEASK  559 (651)
Q Consensus       534 ~~~~Td~~G~f-~~~l~~g~y~l~vs~  559 (651)
                      +.+++|.+|.| +..||+|+|-|..+.
T Consensus        89 r~t~cD~~G~F~F~~Lp~G~Yyl~a~v  115 (150)
T 3qec_A           89 REATTDQNGRFDFDHIPNGTYYISSEL  115 (150)
T ss_dssp             EEEECCTTSEEEEEEECSEEEEEEEEE
T ss_pred             eEEEeCCCCcEEECCCCCccEEEEEEE
Confidence            46789999999 889999999877543

>2ww8_A RRGA, cell WALL surface anchor family protein; IGG, pilus, CNA_B, adhesin, integrin, cell adhesion; HET: EPE; 1.90A {Streptococcus pneumoniae}

Probab=82.50  E-value=2  Score=50.40  Aligned_cols=66  Identities=21%  Similarity=0.305  Sum_probs=49.7

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee----e-eeeeCCCeeE-EeeccCceEEEEEEE--eeeeeEE--EEEEeeCC
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN----V-SFMSSQRGEY-WRVLMPGIYFIEASK--EGYELFR--DRIKIPES  574 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~----~-~~~Td~~G~f-~~~l~~g~y~l~vs~--~Gy~~~~--~~v~v~~~  574 (651)
                      .|+-+-+|++|+||+||...|.+..    . ..+||.+|.+ +..|++|+|+|+=..  .||....  ..|+|...
T Consensus        49 ~~~i~K~d~~~~~L~GA~F~l~~~~~~~~~~~~tTd~~G~~~~~~L~~G~Y~l~Et~AP~GY~l~~~~~~v~v~~~  124 (893)
T 2ww8_A           49 KVVIKETGEGGALLGDAVFELKNNTDGTTVSQRTEAQTGEAIFSNIKPGTYTLTEAQPPVGYKPSTKQWTVEVEKN  124 (893)
T ss_dssp             EEEEEEECSTTCBCCCCEEEEEETTTCCEEEEECCTTTCEEEEEEECSEEEEEEEEECCTTBCCCCCEEEEEECTT
T ss_pred             EEEEEEECCCCCccCCCEEEEEECCCCeEEEEEEECCCCeEEECCCCCCcEEEEEccCCCceecCCccEEEEECCC
Confidence            3666677889999999999997643    2 3578999999 778999999887544  5997653  35555543

>1cwv_A Invasin; integrin-binding protein, INV gene, structural protein; HET: CIT; 2.30A {Yersinia pseudotuberculosis} SCOP: b.1.14.1 b.1.14.1 b.1.14.1 b.1.14.1 d.169.1.3

Probab=80.32  E-value=4.7  Score=43.93  Aligned_cols=63  Identities=19%  Similarity=0.139  Sum_probs=47.5

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------eeeeeCCCeeEEe---eccCceEEEEEEEeeeeeEEEEEEee
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------VSFMSSQRGEYWR---VLMPGIYFIEASKEGYELFRDRIKIP  572 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------~~~~Td~~G~f~~---~l~~g~y~l~vs~~Gy~~~~~~v~v~  572 (651)
                      .++-+|+|+.|.||++..|.+.-..      ....||.+|.+..   ...+|.|+|+++..|- ++...+.+.
T Consensus        29 ~ltatV~D~~Gnpv~g~~Vtf~~~~g~~~~~~t~~Td~~G~a~~tltst~aG~~~VtAt~~g~-s~s~~v~f~  100 (492)
T 1cwv_A           29 TVEFTVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQ-RQSVDTHFV  100 (492)
T ss_dssp             EEEEEEECTTSCBCCSCEEEEECCTTCBSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTE-EEEEEEEEE
T ss_pred             EEEEEEEcCCCCCCCCCEEEEEECCCccccccceeeCCCceEEEEEEcCcceEEEEEEEECCc-cceeEEEEe
Confidence            4889999999999999999986321      2457899999933   3578999999998873 444444443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	651
d1uwya2	296	c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic d	2e-43
d1uwya2	296	c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic d	7e-34
d1uwya2	296	c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic d	2e-06
d1h8la2	301	c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic d	3e-39
d1h8la2	301	c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic d	7e-33
d1h8la2	301	c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic d	4e-05
d2c1ca1	312	c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earwor	1e-35
d2c1ca1	312	c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earwor	3e-09
d2c1ca1	312	c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earwor	6e-04
d1jqga1	317	c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton boll	2e-35
d1jqga1	317	c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton boll	9e-11
d1ayea1	307	c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo	5e-35
d1ayea1	307	c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo	1e-08
d1m4la_	307	c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus)	7e-35
d1m4la_	307	c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus)	2e-09
d1m4la_	307	c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus)	2e-08
d2bo9a1	305	c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo	1e-32
d2bo9a1	305	c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo	3e-08
d1obra_	323	c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyce	3e-30
d1obra_	323	c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyce	9e-18
d1obra_	323	c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyce	0.004
d1z5ra1	304	c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus sc	4e-29
d1z5ra1	304	c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus sc	5e-06
d1uwya1	107	b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal	4e-05
d1h8la1	79	b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal	4e-05
d2gu2a1	307	c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattu	2e-04
d2g9da1	340	c.56.5.7 (A:3-342) Succinylglutamate desuccinylase	5e-04
d1yw6a1	322	c.56.5.7 (A:1-322) Succinylglutamate desuccinylase	0.001
d1yw4a1	331	c.56.5.7 (A:2-332) Succinylglutamate desuccinylase	0.001
d2bcoa1	339	c.56.5.7 (A:4-342) Succinylglutamate desuccinylase	0.003

>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 296

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase M, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  156 bits (394), Expect = 2e-43
 Identities = 89/263 (33%), Positives = 129/263 (49%), Gaps = 54/263 (20%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           + ++L V+ +   P  H++G+P  K V N+HGDE +GRE++L L++YLV      D  I 
Sbjct: 36  KGRNLWVLVVGRFPKEHRIGIPEFKYVANMHGDETVGRELLLHLIDYLVTSD-GKDPEIT 94

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTK----------- 403
            L+++TRIH++P++NPDG E   + +C    GR       L   FP              
Sbjct: 95  NLINSTRIHIMPSMNPDGFEAVKKPDCYYSIGRENYNQYDLNRNFPDAFEYNNVSRQPET 154

Query: 404 ---------------------------------------NKPALTPDTDVFLHLASTYAR 424
                                                     +LTPD DVF +LA TYA 
Sbjct: 155 VAVMKWLKTETFVLSANLHGGALVASYPFDNGVQATGALYSRSLTPDDDVFQYLAHTYAS 214

Query: 425 LHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPA 484
            +P M     C       F NGVTNG +WY   GGM DYNY++  C E+TLE+SCC+YP 
Sbjct: 215 RNPNMKKGDECKNKM--NFPNGVTNGYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPR 272

Query: 485 PSEIPIHWRSNQNALISWLQQVH 507
             ++P  W +N+ +LI +++QVH
Sbjct: 273 EEKLPSFWNNNKASLIEYIKQVH 295

>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 296

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase M, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  129 bits (324), Expect = 7e-34
 Identities = 81/200 (40%), Positives = 121/200 (60%), Gaps = 12/200 (6%)

Query: 27  NYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVG 85
           NYH  + M   L+   + Y+++T L+SIGKSV G++L V+ +   P  H++G+P  K V 
Sbjct: 4   NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVA 63

Query: 86  NIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCR 145
           N+HGDE +GRE++L L+++LV      D  I  L+++TRIH++P++NPDG E   + +C 
Sbjct: 64  NMHGDETVGRELLLHLIDYLVTSD-GKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDCY 122

Query: 146 SGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 205
              GR N N +DLNR FPD F +N            S  PE  AV+ W+ +  FV+S  L
Sbjct: 123 YSIGRENYNQYDLNRNFPDAFEYNN----------VSRQPETVAVMKWLKTETFVLSANL 172

Query: 206 HGGNVVASYPYDSFYGESKN 225
           HGG +VASYP+D+    +  
Sbjct: 173 HGGALVASYPFDNGVQATGA 192

>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]} Length = 296

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase M, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.5 bits (112), Expect = 2e-06
 Identities = 38/131 (29%), Positives = 62/131 (47%), Gaps = 10/131 (7%)

Query: 176 LVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQ 235
           L+    + D +   + + +NS    +   ++     A    D +Y   + N N +DLNR 
Sbjct: 79  LIDYLVTSDGKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDCYYSIGRENYNQYDLNRN 138

Query: 236 FPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYG 295
           FPD F +N            S  PE  AV+ W+ +  FV+S  LHGG +VASYP+D+   
Sbjct: 139 FPDAFEYNN----------VSRQPETVAVMKWLKTETFVLSANLHGGALVASYPFDNGVQ 188

Query: 296 ESKDLLVVNIS 306
            +  L   +++
Sbjct: 189 ATGALYSRSLT 199

>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} Length = 301

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase D, catalytic domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

 Score =  144 bits (363), Expect = 3e-39
 Identities = 83/262 (31%), Positives = 129/262 (49%), Gaps = 50/262 (19%)

Query: 296 ESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIR 354
           E ++L V+ IS  P +H+ G P  K +GN+HG+E +GRE++L L+EYL   +      + 
Sbjct: 41  ELRELYVMEISDNPGIHEAGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNFGTDP-EVT 99

Query: 355 FLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISL------------------- 395
            L+ +TRIH++P++NPDG E + EG+     GR       L                   
Sbjct: 100 DLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQVTDPPQPET 159

Query: 396 -------------------------FLPFPVTKNKPAL---TPDTDVFLHLASTYARLHP 427
                                      PF   +   A+   +PD  VF  LA +Y++ + 
Sbjct: 160 LAVMSWLKTYPFVLSANLHGGSLVVNYPFDDDEQGIAIYSKSPDDAVFQQLALSYSKENK 219

Query: 428 TMHMKRPCPG-NTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPS 486
            M+   PC        F +G+TNGA WY+  GGM D+NYL   C E+T+E+ C +YP   
Sbjct: 220 KMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKAE 279

Query: 487 EIPIHWRSNQNALISWLQQVHR 508
           E+P +W  N+ +L+ +++QVHR
Sbjct: 280 ELPKYWEQNRRSLLQFIKQVHR 301

>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} Length = 301

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase D, catalytic domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

 Score =  126 bits (317), Expect = 7e-33
 Identities = 78/205 (38%), Positives = 119/205 (58%), Gaps = 12/205 (5%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGN 86
           +H++  M   L  +   Y ++T LYS+GKSV  ++L V+ IS  P +H+ G P  K +GN
Sbjct: 10  HHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIGN 69

Query: 87  IHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRS 146
           +HG+E +GRE++L L+E+L   +      +  L+ +TRIH++P++NPDG E + EG+   
Sbjct: 70  MHGNEVVGRELLLNLIEYLCKNFGTDP-EVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGG 128

Query: 147 GRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLH 206
             GRNN NN+DLNR FPD F             +    PE  AV+ W+ + PFV+S  LH
Sbjct: 129 TVGRNNSNNYDLNRNFPDQFFQV----------TDPPQPETLAVMSWLKTYPFVLSANLH 178

Query: 207 GGNVVASYPYDSFYGESKNNINNHD 231
           GG++V +YP+D           + D
Sbjct: 179 GGSLVVNYPFDDDEQGIAIYSKSPD 203

>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} Length = 301

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase D, catalytic domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

 Score = 43.3 bits (101), Expect = 4e-05
 Identities = 34/106 (32%), Positives = 49/106 (46%), Gaps = 10/106 (9%)

Query: 186 EVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS 245
               V D + S    +   ++      S   D      +NN NN+DLNR FPD F     
Sbjct: 94  TDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQV-- 151

Query: 246 NIPTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYD 291
                   +    PE  AV+ W+ + PFV+S  LHGG++V +YP+D
Sbjct: 152 --------TDPPQPETLAVMSWLKTYPFVLSANLHGGSLVVNYPFD 189

>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm (Helicoverpa zea) [TaxId: 7113]} Length = 312

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Corn earworm (Helicoverpa zea) [TaxId: 7113]

 Score =  134 bits (338), Expect = 1e-35
 Identities = 55/279 (19%), Positives = 96/279 (34%), Gaps = 25/279 (8%)

Query: 23  MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVK 82
           + + NY   +++ E L+     Y ++  + +  +S  G+ +  + IST        P + 
Sbjct: 1   LPYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIF 60

Query: 83  IVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEG 142
           I G IH  E I    +   +  LV +          LL+     LLP +NPDG +     
Sbjct: 61  IDGGIHAREWISPPSVTWAIHKLVEDV-----TENDLLEKFDWILLPVVNPDGYKYTFTN 115

Query: 143 NCRSGRGRNNINN--------HDLNRQFPDYFR----HNRSNIPTLVSTSQSIDPEVQAV 190
                + R+  NN         D NR F   +      N         TS   + E + V
Sbjct: 116 ERFWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGTSAFSEVETRVV 175

Query: 191 IDWMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIP 248
            D ++       + L +H    +  YP+      S+N +  H +        + N     
Sbjct: 176 RDILHEHLARMALYLTMHSFGSMILYPWGHDGSLSQNALGLHTVGVAMASVIQSNALPNF 235

Query: 249 TLVSTSQSIDPEVQAV----IDWM--NSVPFVMSLQLHG 281
              +   S       +     D+     VP   + +L G
Sbjct: 236 PPYTVGNSALVIGYYIAGSSEDYAHSIGVPLSYTYELPG 274

>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm (Helicoverpa zea) [TaxId: 7113]} Length = 312

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Corn earworm (Helicoverpa zea) [TaxId: 7113]

 Score = 56.7 bits (136), Expect = 3e-09
 Identities = 23/94 (24%), Positives = 35/94 (37%), Gaps = 5/94 (5%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E + +  + IST        P + I G IH  E I    +   +  LV +          
Sbjct: 37  EGRPIKYIKISTTNFEDENKPVIFIDGGIHAREWISPPSVTWAIHKLVEDV-----TEND 91

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP 389
           LL+     LLP +NPDG +          + R+ 
Sbjct: 92  LLEKFDWILLPVVNPDGYKYTFTNERFWRKTRST 125

>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm (Helicoverpa zea) [TaxId: 7113]} Length = 312

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Corn earworm (Helicoverpa zea) [TaxId: 7113]

 Score = 40.2 bits (93), Expect = 6e-04
 Identities = 13/101 (12%), Positives = 27/101 (26%), Gaps = 15/101 (14%)

Query: 394 SLFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAW 453
            +  P+    +      +      +    A +  +  +    P      +  G +     
Sbjct: 198 MILYPWGHDGSLS---QNALGLHTVGVAMASVIQSNALPNFPP------YTVGNSALVIG 248

Query: 454 YSFSGGMADYNYLYHGCLELTLEISCCR------YPAPSEI 488
           Y  +G   DY +     L  T E+          +  P  I
Sbjct: 249 YYIAGSSEDYAHSIGVPLSYTYELPGLSSGWDGFHLPPQYI 289

>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]} Length = 317

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]

 Score =  134 bits (337), Expect = 2e-35
 Identities = 52/277 (18%), Positives = 92/277 (33%), Gaps = 21/277 (7%)

Query: 18  RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLG 77
              + +SF   H+Y+ +   L+   + + N+  +   GKS  G+ +  + IST       
Sbjct: 2   STRSRLSFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDAS 61

Query: 78  VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
            P V +   +H  E +     L  +  LV++    D     L++N    +LP  NPDG  
Sbjct: 62  KPVVMMQSLLHCREWVTLPATLYAIHKLVIDVTESD-----LINNIDWIILPVANPDGYV 116

Query: 138 LAVEGNCRSGRGR-------NNINNHDLNRQFPDYFRHNRSNIP---TLVSTSQSIDPEV 187
               G+    + R       N     DLNR F   +    S+     T    S   +PE 
Sbjct: 117 HTFGGDRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSAFSEPES 176

Query: 188 QAVIDWMNS--VPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS 245
             + D +        + L +H    +  Y Y +      N +  H +  Q        + 
Sbjct: 177 SVIRDIIAEHRNRMALYLDIHSFGSMILYGYGN-GVLPSNALQLHLIGVQMAQAIDRVKW 235

Query: 246 NIPTLV---STSQSIDPEVQAVIDWMNSVPFVMSLQL 279
           +        +    +        D+        S   
Sbjct: 236 SSNKDYIVGNIFHVLYAASGGASDYAMQAAAPFSYTY 272

>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]} Length = 317

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]

 Score = 61.4 bits (148), Expect = 9e-11
 Identities = 22/94 (23%), Positives = 36/94 (38%), Gaps = 5/94 (5%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E + +  + IST        P V +   +H  E +     L  +  LV++    D     
Sbjct: 43  EGRSIKYLRISTTNFQDASKPVVMMQSLLHCREWVTLPATLYAIHKLVIDVTESD----- 97

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP 389
           L++N    +LP  NPDG      G+    + R  
Sbjct: 98  LINNIDWIILPVANPDGYVHTFGGDRYWRKNRAT 131

>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Length = 307

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  132 bits (333), Expect = 5e-35
 Identities = 52/272 (19%), Positives = 104/272 (38%), Gaps = 17/272 (6%)

Query: 20  AAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVP 79
           +   +FG YH  + + +E++N    +  +    +IG S   + + V+  ST        P
Sbjct: 3   SGNFNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTGGDK----P 58

Query: 80  NVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELA 139
            + +   IH  E + +   L     +V +Y +  S I  +LD   I LLP  NPDG   +
Sbjct: 59  AIWLDAGIHAREWVTQATALWTANKIVSDYGKDPS-ITSILDALDIFLLPVTNPDGYVFS 117

Query: 140 VEGNCRSGRGRNNINN-----HDLNRQFPDYFRHNRS----NIPTLVSTSQSIDPEVQAV 190
              N    + R+ ++       D NR +   F    +       +    S + + EV+++
Sbjct: 118 QTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSANSEVEVKSI 177

Query: 191 IDWMNSVP-FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPT 249
           +D++ S       + LH  + +  +PY     +  +     ++ ++     R        
Sbjct: 178 VDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTKLDDFDELSEVAQKAAQSLRSLHGTKYK 237

Query: 250 LVSTSQSIDPEVQAVIDWM--NSVPFVMSLQL 279
           +      I       IDW     + +  + +L
Sbjct: 238 VGPICSVIYQASGGSIDWSYDYGIKYSFAFEL 269

>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Length = 307

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.4 bits (130), Expect = 1e-08
 Identities = 17/104 (16%), Positives = 31/104 (29%), Gaps = 14/104 (13%)

Query: 409 TPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYH 468
             D D    +A   A+   ++H  +   G             +  Y  SGG  D++Y Y 
Sbjct: 211 LDDFDELSEVAQKAAQSLRSLHGTKYKVGP----------ICSVIYQASGGSIDWSYDYG 260

Query: 469 GCLELTLEI---SCCRY-PAPSEIPIHWRSNQNALISWLQQVHR 508
                  E+       +     +I          L + ++ V  
Sbjct: 261 IKYSFAFELRDTGRYGFLLPARQILPTAEETWLGLKAIMEHVRD 304

>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]} Length = 307

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cow (Bos taurus) [TaxId: 9913]

 Score =  132 bits (332), Expect = 7e-35
 Identities = 49/272 (18%), Positives = 95/272 (34%), Gaps = 14/272 (5%)

Query: 18  RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLG 77
           R     ++  YH  D + + ++     +  +     IG+S  G+ + V+  ST   ++  
Sbjct: 2   RSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGGSNR-- 59

Query: 78  VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
            P + I   IH  E I +   +   +    +Y + D +   +LD+  I L    NPDG  
Sbjct: 60  -PAIWIDLGIHSREWITQATGVWFAKKFTEDYGQ-DPSFTAILDSMDIFLEIVTNPDGFA 117

Query: 138 LAVEGNCRSGRGRN-----NINNHDLNRQFPDYFRHNRSN----IPTLVSTSQSIDPEVQ 188
                N    + R+          D NR +   F    ++      T      + + EV+
Sbjct: 118 FTHSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYANSEVEVK 177

Query: 189 AVIDWMNS-VPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNI 247
           +++D++     F   L +H  + +  YPY        +    + + +      +      
Sbjct: 178 SIVDFVKDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTS 237

Query: 248 PTLVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 279
               S   +I       IDW  +     S   
Sbjct: 238 YKYGSIITTIYQASGGSIDWSYNQGIKYSFTF 269

>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]} Length = 307

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 57.1 bits (137), Expect = 2e-09
 Identities = 22/94 (23%), Positives = 38/94 (40%), Gaps = 4/94 (4%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E + + V+  ST   ++   P + I   IH  E I +   +   +    +Y + D +   
Sbjct: 43  EGRPIYVLKFSTGGSNR---PAIWIDLGIHSREWITQATGVWFAKKFTEDYGQ-DPSFTA 98

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP 389
           +LD+  I L    NPDG       N    + R+ 
Sbjct: 99  ILDSMDIFLEIVTNPDGFAFTHSQNRLWRKTRSV 132

>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]} Length = 307

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cow (Bos taurus) [TaxId: 9913]

 Score = 54.0 bits (129), Expect = 2e-08
 Identities = 17/117 (14%), Positives = 34/117 (29%), Gaps = 17/117 (14%)

Query: 394 SLFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAW 453
            L  P+  T       PD      +A +      +++      G+               
Sbjct: 201 LLLYPYGYTTQSI---PDKTELNQVAKSAVAALKSLYGTSYKYGSI----------ITTI 247

Query: 454 YSFSGGMADYNYLYHGCLELTLEISCCR----YPAPSEIPIHWRSNQNALISWLQQV 506
           Y  SGG  D++Y        T E+            S+I    +     +++ ++  
Sbjct: 248 YQASGGSIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHT 304

>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  125 bits (315), Expect = 1e-32
 Identities = 55/273 (20%), Positives = 102/273 (37%), Gaps = 15/273 (5%)

Query: 22  GMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNV 81
             ++G YH+ + +  E++N    + ++     IG S   + + V+  ST        P V
Sbjct: 3   NFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGKGV--RRPAV 60

Query: 82  KIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE 141
            +   IH  E I +   +     +V +Y + D  I  +L+   I LLP  NPDG      
Sbjct: 61  WLNAGIHSREWISQATAIWTARKIVSDY-QRDPAITSILEKMDIFLLPVANPDGYVYTQT 119

Query: 142 GNCRSGRGRN-----NINNHDLNRQFPDYFRHNRS----NIPTLVSTSQSIDPEVQAVID 192
            N    + R+     +    D NR +   F    +              + + EV++V+D
Sbjct: 120 QNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHANSEVEVKSVVD 179

Query: 193 WMNSVP-FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLV 251
           ++     F   + LH  + +  YPY     ++ +      + R               + 
Sbjct: 180 FIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVG 239

Query: 252 STSQSIDPEVQAVIDWM--NSVPFVMSLQLHGG 282
            T  ++ P   + IDW   N + F  + +L   
Sbjct: 240 PTCTTVYPASGSSIDWAYDNGIKFAFTFELRDT 272

>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]} Length = 305

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.3 bits (127), Expect = 3e-08
 Identities = 14/108 (12%), Positives = 27/108 (25%), Gaps = 14/108 (12%)

Query: 405 KPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYN 464
                PD +    +A   A+   ++                        Y  SG   D+ 
Sbjct: 207 SVKKAPDAEELDKVARLAAKALASVSGT----------EYQVGPTCTTVYPASGSSIDWA 256

Query: 465 YLYHGCLELTLEI----SCCRYPAPSEIPIHWRSNQNALISWLQQVHR 508
           Y        T E+    +       ++I          L + ++ V  
Sbjct: 257 YDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHVRD 304

>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 323

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Carboxypeptidase T
domain: Carboxypeptidase T
species: Thermoactinomyces vulgaris [TaxId: 2026]

 Score =  119 bits (298), Expect = 3e-30
 Identities = 60/270 (22%), Positives = 96/270 (35%), Gaps = 20/270 (7%)

Query: 28  YHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNI 87
           YHNY+ M  ++      Y N+ + +SIGKS  G++L  V IS         P V      
Sbjct: 9   YHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALH 68

Query: 88  HGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSG 147
           H  E +  E+ L  L+     Y   DS I  L++N  I+++ N+NPDG E  +       
Sbjct: 69  HAREHLTVEMALYTLDLFTQNYNL-DSRITNLVNNREIYIVFNINPDGGEYDISSGSYKS 127

Query: 148 RGRNNINNH-------DLNRQFPDYFRHNRSNI-----PTLVSTSQSIDPEVQAVIDWMN 195
             +N   N        DLNR +   +     +       T    S    PE  A+ D++N
Sbjct: 128 WRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFIN 187

Query: 196 SV------PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPT 249
           S            +  H  + +  YPY   Y +  ++    D    F             
Sbjct: 188 SRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPSD-MTQDDFNVFKTMANTMAQTNGY 246

Query: 250 LVSTSQSIDPEVQAVIDWMNSVPFVMSLQL 279
               +  +      + DW      + +   
Sbjct: 247 TPQQASDLYITDGDMTDWAYGQHKIFAFTF 276

>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 323

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Carboxypeptidase T
domain: Carboxypeptidase T
species: Thermoactinomyces vulgaris [TaxId: 2026]

 Score = 82.6 bits (203), Expect = 9e-18
 Identities = 44/275 (16%), Positives = 72/275 (26%), Gaps = 64/275 (23%)

Query: 296 ESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRF 355
           E ++L  V IS         P V      H  E +  E+ L  L+     Y   DS I  
Sbjct: 40  EGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNYNL-DSRITN 98

Query: 356 LLDNTRIHLLPNLNPDGSELAVEGNC-------RSGRGRTPPFLISLFLPFP-------- 400
           L++N  I+++ N+NPDG E  +           R     +      L   +         
Sbjct: 99  LVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGG 158

Query: 401 ---------------------------VTKNKPALTPDTDVFLHLAST-YARLHPTMHMK 432
                                      +              +   +     L+P  +  
Sbjct: 159 SSGSPSSETYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTY 218

Query: 433 RPCPGNTVLKFEN---------------GVTNGAAWYSFSGGMADYNYLYHGCLELTLEI 477
              P +      N                    +  Y   G M D+ Y  H     T E+
Sbjct: 219 TDVPSDMTQDDFNVFKTMANTMAQTNGYTPQQASDLYITDGDMTDWAYGQHKIFAFTFEM 278

Query: 478 SCCR-----YPAPSEIPIHWRSNQNALISWLQQVH 507
                    YP    I      N+ A++   ++  
Sbjct: 279 YPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKAD 313

>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces vulgaris [TaxId: 2026]} Length = 323

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Carboxypeptidase T
domain: Carboxypeptidase T
species: Thermoactinomyces vulgaris [TaxId: 2026]

 Score = 37.2 bits (85), Expect = 0.004
 Identities = 18/88 (20%), Positives = 30/88 (34%), Gaps = 11/88 (12%)

Query: 223 SKNNINNHDLNRQFPDYFRHNRSNI-----PTLVSTSQSIDPEVQAVIDWMNSV------ 271
           S ++    DLNR +   +     +       T    S    PE  A+ D++NS       
Sbjct: 136 SGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGRSAFSAPETAAMRDFINSRVVGGKQ 195

Query: 272 PFVMSLQLHGGNVVASYPYDSFYGESKD 299
                +  H  + +  YPY   Y +   
Sbjct: 196 QIKTLITFHTYSELILYPYGYTYTDVPS 223

>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]} Length = 304

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Pig (Sus scrofa) [TaxId: 9823]

 Score =  115 bits (289), Expect = 4e-29
 Identities = 48/269 (17%), Positives = 96/269 (35%), Gaps = 15/269 (5%)

Query: 22  GMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNV 81
           G S+  Y+N++ +    +  T    ++    +IG + LG ++ ++ +     ++   P +
Sbjct: 1   GHSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPGPNK---PAI 57

Query: 82  KIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVE 141
            +    H  E I        +   V+ Y   +S++   L+    ++LP LN DG      
Sbjct: 58  FMDCGFHAREWISHAFCQWFVREAVLTY-GYESHMTEFLNKLDFYVLPVLNIDGYIYTWT 116

Query: 142 GNCRSGRGRNN-----INNHDLNRQFPDYFRHNRS----NIPTLVSTSQSIDPEVQAVID 192
            N    + R+          D NR F   +    +       T   ++   + E +A+ D
Sbjct: 117 KNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAESEKETKALAD 176

Query: 193 WMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTL 250
           ++ +        L +H  + +  YPY   Y   +NN   ++L +              T 
Sbjct: 177 FIRNNLSSIKAYLTIHSYSQMILYPYSYDYKLPENNAELNNLAKAAVKELATLYGTKYTY 236

Query: 251 VSTSQSIDPEVQAVIDWMNSVPFVMSLQL 279
              + +I P      DW        S   
Sbjct: 237 GPGATTIYPAAGGSDDWAYDQGIKYSFTF 265

>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]} Length = 304

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Pig (Sus scrofa) [TaxId: 9823]

 Score = 46.3 bits (109), Expect = 5e-06
 Identities = 13/84 (15%), Positives = 24/84 (28%), Gaps = 13/84 (15%)

Query: 395 LFLPFPVTKNKPALTPDTDVFLHLASTYARLHPTMHMKRPCPGNTVLKFENGVTNGAAWY 454
           +  P+      P    +     +LA    +   T++  +   G                Y
Sbjct: 198 ILYPYSYDYKLP---ENNAELNNLAKAAVKELATLYGTKYTYG----------PGATTIY 244

Query: 455 SFSGGMADYNYLYHGCLELTLEIS 478
             +GG  D+ Y        T E+ 
Sbjct: 245 PAAGGSDDWAYDQGIKYSFTFELR 268

>d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]} Length = 107

class: All beta proteins
fold: Prealbumin-like
superfamily: Carboxypeptidase regulatory domain-like
family: Carboxypeptidase regulatory domain
domain: Carboxypeptidase M C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.0 bits (95), Expect = 4e-05
 Identities = 31/108 (28%), Positives = 51/108 (47%), Gaps = 5/108 (4%)

Query: 509 GVKGLVLDETGSRL--ANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFR 566
           GVKG V D+ G+ L    V +        + +++ GEY+ +L+PG Y I  +  G++   
Sbjct: 1   GVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHDPHI 60

Query: 567 DRIKIPESTSPVVGAVLESLLEFNITMTSIQNDKVGNASKEGYELFRD 614
            ++ IPE +        + LL F   + SI    V N S     L+R+
Sbjct: 61  TKVIIPEKSQNFSALKKDILLPFQGQLDSI---PVSNPSCPMIPLYRN 105

>d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]} Length = 79

class: All beta proteins
fold: Prealbumin-like
superfamily: Carboxypeptidase regulatory domain-like
family: Carboxypeptidase regulatory domain
domain: Carboxypeptidase D C-terminal domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

 Score = 40.2 bits (93), Expect = 4e-05
 Identities = 24/77 (31%), Positives = 38/77 (49%), Gaps = 1/77 (1%)

Query: 509 GVKGLVLD-ETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRD 567
           G+ G VLD   G  + N +IS+A  N    + + G+YWR+L+ G Y + AS  GY+    
Sbjct: 1   GIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYDPVTK 60

Query: 568 RIKIPESTSPVVGAVLE 584
            +++       V   L 
Sbjct: 61  TVEVDSKGGVQVNFTLS 77

>d2gu2a1 c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 307

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Aspartoacylase AspA
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 41.5 bits (97), Expect = 2e-04
 Identities = 18/92 (19%), Positives = 27/92 (29%), Gaps = 22/92 (23%)

Query: 78  VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSE 137
           +  + I G  HG+E  G  ++   L++                    +      NP    
Sbjct: 7   IKKIAIFGGTHGNELTGVFLVTHWLKNG----------AEVHRAGLEV-KPFITNP---- 51

Query: 138 LAVEGNCRSGRGRNNINNHDLNRQFPDYFRHN 169
            AVE   R         + DLNR F       
Sbjct: 52  RAVEKCTRY-------IDCDLNRVFDLENLSK 76

>d2g9da1 c.56.5.7 (A:3-342) Succinylglutamate desuccinylase AstE {Vibrio cholerae [TaxId: 666]} Length = 340

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Vibrio cholerae [TaxId: 666]

 Score = 40.4 bits (94), Expect = 5e-04
 Identities = 17/88 (19%), Positives = 30/88 (34%), Gaps = 21/88 (23%)

Query: 77  GVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGS 136
              N+ I   IHGDE    E++ + ++ +V  +        F++ +              
Sbjct: 50  ATKNMVISCGIHGDETAPMELLDKWIDDIVSGFQPVAERCLFIMAH-------------- 95

Query: 137 ELAVEGNCRSGRGRNNINNHDLNRQFPD 164
             A   + R           +LNR F D
Sbjct: 96  PQATVRHVR-------FIEQNLNRLFDD 116

>d1yw6a1 c.56.5.7 (A:1-322) Succinylglutamate desuccinylase AstE {Escherichia coli [TaxId: 562]} Length = 322

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Escherichia coli [TaxId: 562]

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 18/94 (19%), Positives = 31/94 (32%), Gaps = 21/94 (22%)

Query: 79  PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 138
             + I   IHG+E    E++  LL  +    I                L+   NP     
Sbjct: 44  GALVISAGIHGNETAPVEMLDALLGAISHGEIPL----------RWRLLVILGNP----P 89

Query: 139 AVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSN 172
           A++   R         + D+NR F   ++    +
Sbjct: 90  ALKQGKR-------YCHSDMNRMFGGRWQLFAES 116

>d1yw4a1 c.56.5.7 (A:2-332) Succinylglutamate desuccinylase AstE {Chromobacterium violaceum [TaxId: 536]} Length = 331

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Chromobacterium violaceum [TaxId: 536]

 Score = 39.3 bits (91), Expect = 0.001
 Identities = 18/90 (20%), Positives = 33/90 (36%), Gaps = 21/90 (23%)

Query: 74  HQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNP 133
              G  +V +   +HG+E    E++  +L  +    +  +  +          L+   N 
Sbjct: 41  DARGADSVLLSCGVHGNETAPIEVVDGMLTDIAAGQLALNCRL----------LVMFANL 90

Query: 134 DGSELAVEGNCRSGRGRNNINNHDLNRQFP 163
           D    A+    R G       N+D+NR F 
Sbjct: 91  D----AIRQGVRYG-------NYDMNRLFN 109

>d2bcoa1 c.56.5.7 (A:4-342) Succinylglutamate desuccinylase AstE {Vibrio parahaemolyticus [TaxId: 670]} Length = 339

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Vibrio parahaemolyticus [TaxId: 670]

 Score = 37.7 bits (87), Expect = 0.003
 Identities = 14/85 (16%), Positives = 25/85 (29%), Gaps = 21/85 (24%)

Query: 79  PNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSEL 138
            N+ I   IHGDE    E++  +++ +                     L    +P+ +  
Sbjct: 51  KNIIISCGIHGDETAPMELVDSIIKDI----------ESGFQKVDARCLFIIAHPESTLA 100

Query: 139 AVEGNCRSGRGRNNINNHDLNRQFP 163
                             +LNR F 
Sbjct: 101 HTRF-----------LEENLNRLFD 114

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	651
d1uwya2	296	Carboxypeptidase M, catalytic domain {Human (Homo	100.0
d1h8la2	301	Carboxypeptidase D, catalytic domain {Crested duck	100.0
d1obra_	323	Carboxypeptidase T {Thermoactinomyces vulgaris [Ta	100.0
d1m4la_	307	Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]	100.0
d1jqga1	317	Carboxypeptidase A {Cotton bollworm (Helicoverpa a	100.0
d1ayea1	307	Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9	100.0
d2c1ca1	312	Carboxypeptidase B {Corn earworm (Helicoverpa zea)	100.0
d1z5ra1	304	Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]	100.0
d2bo9a1	305	Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9	100.0
d1m4la_	307	Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]	100.0
d1ayea1	307	Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9	100.0
d1z5ra1	304	Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]	100.0
d2c1ca1	312	Carboxypeptidase B {Corn earworm (Helicoverpa zea)	100.0
d1jqga1	317	Carboxypeptidase A {Cotton bollworm (Helicoverpa a	100.0
d2bo9a1	305	Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9	99.97
d1uwya2	296	Carboxypeptidase M, catalytic domain {Human (Homo	99.94
d1h8la2	301	Carboxypeptidase D, catalytic domain {Crested duck	99.92
d1obra_	323	Carboxypeptidase T {Thermoactinomyces vulgaris [Ta	99.9
d1h8la1	79	Carboxypeptidase D C-terminal domain {Crested duck	99.56
d1uwya1	107	Carboxypeptidase M C-terminal domain {Human (Homo	99.33
d1nkga1	87	Rhamnogalacturonase B, RhgB, middle domain {Asperg	99.28
d1vlfn1	79	Transhydroxylase beta subunit, BthL, C-terminal do	98.87
d1yw4a1	331	Succinylglutamate desuccinylase AstE {Chromobacter	98.63
d1yw6a1	322	Succinylglutamate desuccinylase AstE {Escherichia	98.51
d2bcoa1	339	Succinylglutamate desuccinylase AstE {Vibrio parah	98.45
d2g9da1	340	Succinylglutamate desuccinylase AstE {Vibrio chole	98.34
d2gu2a1	307	Aspartoacylase AspA {Rat (Rattus norvegicus) [TaxI	98.3
d1yw6a1	322	Succinylglutamate desuccinylase AstE {Escherichia	97.24
d2bcoa1	339	Succinylglutamate desuccinylase AstE {Vibrio parah	97.07
d2g9da1	340	Succinylglutamate desuccinylase AstE {Vibrio chole	97.05
d1yw4a1	331	Succinylglutamate desuccinylase AstE {Chromobacter	97.01
d2gu2a1	307	Aspartoacylase AspA {Rat (Rattus norvegicus) [TaxI	96.53
d1s9aa_	256	Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus	96.04
d1dmha_	309	Catechol 1,2-dioxygenase {Acinetobacter calcoaceti	95.43
d2b59b2	96	Cellulosomal scaffolding protein A {Clostridium th	95.07
d2burb1	238	Protocatechuate-3,4-dioxygenase, beta chain {Acine	94.77
d3pccm_	236	Protocatechuate-3,4-dioxygenase, beta chain {Pseud	94.31
d1cwva1	94	Invasin {Yersinia pseudotuberculosis [TaxId: 633]}	94.18
d3pcca_	200	Protocatechuate-3,4-dioxygenase, alpha chain {Pseu	94.15
d1cwva2	96	Invasin {Yersinia pseudotuberculosis [TaxId: 633]}	93.54
d2bura1	202	Protocatechuate-3,4-dioxygenase, alpha chain {Acin	93.13
d1f00i1	95	Intimin {Escherichia coli [TaxId: 562]}	87.39
d1cwva3	103	Invasin {Yersinia pseudotuberculosis [TaxId: 633]}	83.32

>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase M, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1.4e-61  Score=501.56  Aligned_cols=294  Identities=45%  Similarity=0.850  Sum_probs=268.4

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRL  101 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~l~~  101 (651)
                      +|| +||||+||.++|++|+++||+++++.+||+|+|||+|++++|++++ .+...||.|+|+||+||+||+|+++++++
T Consensus         1 ~d~-~Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~eGr~i~~l~i~~~~~~~~~~kp~v~~~~giHa~E~~g~~~~~~~   79 (296)
T d1uwya2           1 LDF-NYHRQEGMEAFLKTVAQNYSSVTHLHSIGKSVKGRNLWVLVVGRFPKEHRIGIPEFKYVANMHGDETVGRELLLHL   79 (296)
T ss_dssp             CCS-SCCCHHHHHHHHHHHHHHTTTSEEEEEEEECTTSCEEEEEEESSSTTSCBTTBCEEEEEECCSTTCCHHHHHHHHH
T ss_pred             CCC-CcCCHHHHHHHHHHHHHHCCCceEEEEeEECCCCCeEEEEEEeCCCCCccCCCceEEEEeccCCCCccHHHHHHHH
Confidence            588 6999999999999999999999999999999999999999999876 44568999999999999999999999999


Q ss_pred             HHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCC
Q psy8322         102 LEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQ  181 (651)
Q Consensus       102 ~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~  181 (651)
                      +++|+++| +.|++++.||++++|+|||++|||||+++++++|.+..+|.||+||||||||+..|.          |+.|
T Consensus        80 ~~~L~~~~-~~d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~~~~~r~n~~GvDlNRNf~~~~~----------g~~~  148 (296)
T d1uwya2          80 IDYLVTSD-GKDPEITNLINSTRIHIMPSMNPDGFEAVKKPDCYYSIGRENYNQYDLNRNFPDAFE----------YNNV  148 (296)
T ss_dssp             HHHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHCSSCCSSCCSCSSCTTSCCTTSCSCCSSS----------CCCC
T ss_pred             HHHHhhcc-ccCHHHHHhhhcceEEEEeeecCchHhhcccccccccCccCCCccccCccccccccC----------CCcc
Confidence            99999998 889999999999999999999999999999999877778999999999999998884          6789


Q ss_pred             CCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCccccccccccccc
Q psy8322         182 SIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEV  261 (651)
Q Consensus       182 ~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  261 (651)
                      +|||||+||+++++++++.+++++|+++++++|||++.....+                                     
T Consensus       149 ~sepEt~av~~~~~~~~~~~~i~~Hs~~~~i~yP~~~~~~~~~-------------------------------------  191 (296)
T d1uwya2         149 SRQPETVAVMKWLKTETFVLSANLHGGALVASYPFDNGVQATG-------------------------------------  191 (296)
T ss_dssp             CCCHHHHHHHHHHHHSCEEECCEEECSEEEEEESCSSCCGGGT-------------------------------------
T ss_pred             ccHHHHHHHHHHHHhCCceEEEEecCCCeeEecCCCCCccccc-------------------------------------
Confidence            9999999999999999999999999999999999999632210                                     


Q ss_pred             hhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHH
Q psy8322         262 QAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEY  341 (651)
Q Consensus       262 g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~  341 (651)
                                          .    .+                                                     
T Consensus       192 --------------------~----~~-----------------------------------------------------  194 (296)
T d1uwya2         192 --------------------A----LY-----------------------------------------------------  194 (296)
T ss_dssp             --------------------G----GG-----------------------------------------------------
T ss_pred             --------------------c----cc-----------------------------------------------------
Confidence                                0    01                                                     


Q ss_pred             HHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHHHHH
Q psy8322         342 LVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHLAST  421 (651)
Q Consensus       342 l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l~~~  421 (651)
                                                                                     ....+||++.|+.++..
T Consensus       195 ---------------------------------------------------------------~~~~~pd~~~~~~la~~  211 (296)
T d1uwya2         195 ---------------------------------------------------------------SRSLTPDDDVFQYLAHT  211 (296)
T ss_dssp             ---------------------------------------------------------------TCCCCTTHHHHHHHHHH
T ss_pred             ---------------------------------------------------------------cccCCCCHHHHHHHHHH
Confidence                                                                           01237999999999999


Q ss_pred             hhccCCCCcCCCCCCCCccccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchHHHHH
Q psy8322         422 YARLHPTMHMKRPCPGNTVLKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQNALIS  501 (651)
Q Consensus       422 ~a~~~~~~~~~~~~~~~~~~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~all~  501 (651)
                      |+..|+.|+..+.|...  ..+..|+++++.|||++|+++||+|...+++++|+||+||++|+.++++.+|++||++++.
T Consensus       212 ~~~~~~~~~~~~~~~~~--~~~~~g~~~~~~~Y~~~G~~~Dw~y~~~~~~~~T~El~~~~~P~~~~l~~~W~~n~~all~  289 (296)
T d1uwya2         212 YASRNPNMKKGDECKNK--MNFPNGVTNGYSWYPLQGGMQDYNYIWAQCFEITLELSCCKYPREEKLPSFWNNNKASLIE  289 (296)
T ss_dssp             HHHTCTTTTTSSCCSSS--CCCSTTEEESTTTCCCSSCHHHHHHHTSCCBCCEEEEESSSSCCGGGHHHHHHTTHHHHHH
T ss_pred             HHHhchhhccCCCCCCC--CCCCCCccccceEeecCCCccccccccCCEEEEEEEecCCCCCCHHHHHHHHHHHHHHHHH
Confidence            99999999988888653  4678899999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhc
Q psy8322         502 WLQQVH  507 (651)
Q Consensus       502 ~~aqa~  507 (651)
                      ++.++|
T Consensus       290 ~l~~~h  295 (296)
T d1uwya2         290 YIKQVH  295 (296)
T ss_dssp             HHGGGG
T ss_pred             HHHHhc
Confidence            998876

>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase D, catalytic domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

Probab=100.00  E-value=2.1e-57  Score=472.53  Aligned_cols=297  Identities=41%  Similarity=0.791  Sum_probs=268.3

Q ss_pred             CCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCC-CCCCCCCeEEEEecccCCChhHHHHH
Q psy8322          20 AAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREII   98 (651)
Q Consensus        20 ~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~-~~~~~k~~v~i~~~iHg~E~~g~~~~   98 (651)
                      ..+++| +||+|+||.++|++|+++||+++++.+||+|+|||+|++++|++++ ....+||.|+|+|++||+||+|++++
T Consensus         3 ~~p~~f-~Y~ty~e~~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~~~~~~~~kp~v~i~~~~H~~E~~g~~~~   81 (301)
T d1h8la2           3 VQPVDF-RHHHFSDMEIFLRRYANEYPSITRLYSVGKSVELRELYVMEISDNPGIHEAGEPEFKYIGNMHGNEVVGRELL   81 (301)
T ss_dssp             CCCCCC-SCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEESSSTTCCCTTCCEEEEECCSSTTCCHHHHHH
T ss_pred             CCCCCC-CCCCHHHHHHHHHHHHHHCCCcEEEEEccCCCCCCeEEEEEEeCCCCCCcCCCCEEEEeCCCCCCchHHHHHH
Confidence            457889 7999999999999999999999999999999999999999999876 34557999999999999999999999


Q ss_pred             HHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCC
Q psy8322          99 LRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVS  178 (651)
Q Consensus        99 l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G  178 (651)
                      ++|++.|+++| +.+++++.||++++|+|||++|||||++.+.++|++..+|.||+|||||||||+.|.          |
T Consensus        82 ~~~~~~L~~~~-~~~~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~~~~~~~~~n~~gvDlNRnf~~~~~----------g  150 (301)
T d1h8la2          82 LNLIEYLCKNF-GTDPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFF----------Q  150 (301)
T ss_dssp             HHHHHHHHHHT-TTCHHHHHHHHHCEEEEESCSCHHHHHTCCTTCSSCCTTTSCTTSCCGGGCSCCSSS----------C
T ss_pred             HHHHHHHHhcc-cccHHHHHHhhccEEEEEeeeCCCHHHhcccccccccccCCCCccccCccccccccC----------C
Confidence            99999999998 789999999999999999999999999999999888888999999999999999885          5


Q ss_pred             CCCCCcHHHHHHHHHHHhCCcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccCCcccccccccc
Q psy8322         179 TSQSIDPEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSID  258 (651)
Q Consensus       179 ~~~~sepEt~al~~~~~~~~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  258 (651)
                      +.++||||+++++++++++++.+++++|+++++++|||+++....                                   
T Consensus       151 ~~~~sepEt~a~~~~~~~~~~~~~~~~Hs~~~~i~yP~~~~~~~~-----------------------------------  195 (301)
T d1h8la2         151 VTDPPQPETLAVMSWLKTYPFVLSANLHGGSLVVNYPFDDDEQGI-----------------------------------  195 (301)
T ss_dssp             CCSCCCHHHHHHHHHHHHSCEEEEEEEECSEEEEEESCSCCTTCS-----------------------------------
T ss_pred             CCcccHHHHHHHHHHHhhcCceEEEEccCCCcEEecCccCCCccc-----------------------------------
Confidence            689999999999999999999999999999999999999852210                                   


Q ss_pred             ccchhhhcccCCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHH
Q psy8322         259 PEVQAVIDWMNSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRL  338 (651)
Q Consensus       259 ~~~g~~~dw~~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~  338 (651)
                                                 ..+                                                  
T Consensus       196 ---------------------------~~~--------------------------------------------------  198 (301)
T d1h8la2         196 ---------------------------AIY--------------------------------------------------  198 (301)
T ss_dssp             ---------------------------SSC--------------------------------------------------
T ss_pred             ---------------------------ccc--------------------------------------------------
Confidence                                       000                                                  


Q ss_pred             HHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCCCCCCCCChHHHHHH
Q psy8322         339 LEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKNKPALTPDTDVFLHL  418 (651)
Q Consensus       339 ~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~~~~~~~~~~~f~~l  418 (651)
                                                                                          ..+|+++.|+.+
T Consensus       199 --------------------------------------------------------------------~~~pd~~~~~~l  210 (301)
T d1h8la2         199 --------------------------------------------------------------------SKSPDDAVFQQL  210 (301)
T ss_dssp             --------------------------------------------------------------------CCCTTHHHHHHH
T ss_pred             --------------------------------------------------------------------CCCccHHHHHHH
Confidence                                                                                126788899999


Q ss_pred             HHHhhccCCCCcCCCCCCCCcc-ccccCcceeccceEeccCcccchhhhccceeEEEEEecccCCCCCCCcchhhhhchH
Q psy8322         419 ASTYARLHPTMHMKRPCPGNTV-LKFENGVTNGAAWYSFSGGMADYNYLYHGCLELTLEISCCRYPAPSEIPIHWRSNQN  497 (651)
Q Consensus       419 ~~~~a~~~~~~~~~~~~~~~~~-~~~~~gi~n~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~~p~~~~i~~~w~~nr~  497 (651)
                      +..++..|..|+.+..|..... ..+..++.++..||+++|+++||+|...+++++|+||+||++|+.++++.+|++|++
T Consensus       211 a~~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~G~~~Dw~y~~~~~~~~T~Elg~~~~P~~~~i~~~w~~n~~  290 (301)
T d1h8la2         211 ALSYSKENKKMYQGSPCKDLYPTEYFPHGITNGAQWYNVPGGMQDWNYLNTNCFEVTIELGCVKYPKAEELPKYWEQNRR  290 (301)
T ss_dssp             HHHHHTTSHHHHTTCSCTTTSTTCCCGGGEEEHHHHCCCCSCHHHHHHHHSSCEEEEEEEESCSSCCGGGHHHHHHHHHH
T ss_pred             HHHHHHhchhcccCCccccccCccccCCCccccceeeccCCchhhhhhhcCCeEEEEEEeCCCCCCCHHHHHHHHHHHHH
Confidence            9999998888888777765543 356788999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHhhcc
Q psy8322         498 ALISWLQQVHR  508 (651)
Q Consensus       498 all~~~aqa~~  508 (651)
                      +++.++.++++
T Consensus       291 ~ll~~i~~~~~  301 (301)
T d1h8la2         291 SLLQFIKQVHR  301 (301)
T ss_dssp             HHHHHHHGGGC
T ss_pred             HHHHHHHHHhC
Confidence            99999988763

>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces vulgaris [TaxId: 2026]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Carboxypeptidase T
domain: Carboxypeptidase T
species: Thermoactinomyces vulgaris [TaxId: 2026]

Probab=100.00  E-value=2.2e-54  Score=453.62  Aligned_cols=198  Identities=29%  Similarity=0.418  Sum_probs=179.8

Q ss_pred             CCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHH
Q psy8322          24 SFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLE  103 (651)
Q Consensus        24 ~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~  103 (651)
                      .+..||+|+||.++|++|+++||+++++.+||+|++||+|++|+|++++.....||.|+|+|++||+||+|+++++++++
T Consensus         5 ~~~~Y~~y~e~~~~l~~l~~~~p~~~~~~~iG~S~~gr~i~~l~is~~~~~~~~kp~v~i~~~~H~~E~~~~~~~l~~~~   84 (323)
T d1obra_           5 YDSGYHNYNEMVNKINTVASNYPNIVKKFSIGKSYEGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLD   84 (323)
T ss_dssp             GGTTSCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEESTTTTSCCSSCEEEEEECSSTTCTHHHHHHHHHHH
T ss_pred             ccCCcCCHHHHHHHHHHHHHHCCCceEEEEeeEcCCCCeEEEEEEeCCCCCCCCCcEEEEecCCCCCcccHHHHHHHHHH
Confidence            45789999999999999999999999999999999999999999998776667899999999999999999999999999


Q ss_pred             HHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc----cCCCC---CCCccCcCCCCCCCcccCCCC--CCCC
Q psy8322         104 HLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC----RSGRG---RNNINNHDLNRQFPDYFRHNR--SNIP  174 (651)
Q Consensus       104 ~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r----~~~~~---r~n~~GvDLNRnf~~~w~~~~--s~~p  174 (651)
                      .|+++| +.++.++.||++++|+|||++||||+++.++..+    ||+|.   +.+|.|||||||||++|+..+  +.+|
T Consensus        85 ~l~~~~-~~~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~rknr~~~~~~~~~GVDLNRNf~~~w~~~~~~~~~p  163 (323)
T d1obra_          85 LFTQNY-NLDSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSP  163 (323)
T ss_dssp             HHHTTB-TTBHHHHHHHHHCEEEEECCSCHHHHHHTTTTSSCCCCCSCCCCCTTCSCCCCCGGGCSSTTTTCSSSSBSCT
T ss_pred             HHHhcc-cchHHHHHHhcCCeEEEEeeechHHHhhhhcccccccccccccccCCCCccCcccccCCCccCCCCCCCCCCC
Confidence            999988 7889999999999999999999999998876433    55543   468999999999999998754  4578


Q ss_pred             C---CCCCCCCCcHHHHHHHHHHHhC------CcEEEEEEecCceeeeeccccccCC
Q psy8322         175 T---LVSTSQSIDPEVQAVIDWMNSV------PFVMSLQLHGGNVVASYPYDSFYGE  222 (651)
Q Consensus       175 ~---y~G~~~~sepEt~al~~~~~~~------~~~~~i~~H~~~~~~~~P~~~~~~~  222 (651)
                      |   |+|+.|+|||||+|+++|+.++      ++.+++++|+++++++|||+++...
T Consensus       164 ~~~~y~G~~~~SEPEt~a~~~~~~~~~~~~~~~~~~~i~~Hs~~~~i~~P~~~~~~~  220 (323)
T d1obra_         164 SSETYRGRSAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTD  220 (323)
T ss_dssp             TSTTBCCSSTTCSHHHHHHHHHHHTTBCSSSBCEEEEEEEEESSSEEEESCCSCSCS
T ss_pred             CccccCCCCccchhHHHHHHHHHHHhccccccceeeEEEeccCCceEeecCcCCCCC
Confidence            7   8999999999999999999987      6889999999999999999987444

>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=9.4e-53  Score=437.33  Aligned_cols=265  Identities=21%  Similarity=0.300  Sum_probs=227.7

Q ss_pred             CCCCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHH
Q psy8322          18 RPAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREI   97 (651)
Q Consensus        18 ~~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~   97 (651)
                      ++...++|++||||+||.++|++|+++||+++++.+||+|+|||+|++|+|++++   ..||.|+++|++||+||+|+++
T Consensus         2 ~~~~~~~~~~Y~ty~ei~~~l~~l~~~~p~~v~~~~iG~S~egr~i~~~~is~~~---~~kp~v~~~~~~Hg~E~~~~~~   78 (307)
T d1m4la_           2 RSTNTFNYATYHTLDEIYDFMDLLVAEHPQLVSKLQIGRSYEGRPIYVLKFSTGG---SNRPAIWIDLGIHSREWITQAT   78 (307)
T ss_dssp             CSTTTSCTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECSSC---SSCCEEEEEECSSTTCHHHHHH
T ss_pred             CCCCCCCCCCcCCHHHHHHHHHHHHHHCCCceEEEEccCCCCCCeEEEEEEeCCC---CCCcEEEEeccccCCcchHHHH
Confidence            5678999999999999999999999999999999999999999999999999874   5689999999999999999999


Q ss_pred             HHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-C
Q psy8322          98 ILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-S  171 (651)
Q Consensus        98 ~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s  171 (651)
                      ++++++.|++.+ +.|+.++.||++++|+|||++||||+++.+++++  ||+|.   +.+|.|||||||||+.|...+ +
T Consensus        79 ~l~~~~~l~~~~-~~~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~rk~r~~~~~~~~~GvDlNRNf~~~w~~~~~~  157 (307)
T d1m4la_          79 GVWFAKKFTEDY-GQDPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGAS  157 (307)
T ss_dssp             HHHHHHHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSB
T ss_pred             HHHHHHHHHHhh-cccHHHHHHHhcCeEEEEcccccccceeeeccccccccCCCCCCCCcccccccccCCCcCCccCCCC
Confidence            999999999998 7899999999999999999999999999998877  56553   678999999999999998766 5


Q ss_pred             CCCC---CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcc--
Q psy8322         172 NIPT---LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS--  245 (651)
Q Consensus       172 ~~p~---y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--  245 (651)
                      .+||   |+|+.|+||||+|||++++.++ ++.+++++|+++++++|||++.+...++   ..++......++....+  
T Consensus       158 ~~p~~~~y~G~~p~sePEtral~~~l~~~~~~~~~i~~Hs~~~~i~~P~~~~~~~~p~---~~~~~~~~~~~~~~~~~~~  234 (307)
T d1m4la_         158 SSPCSETYHGKYANSEVEVKSIVDFVKDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPD---KTELNQVAKSAVAALKSLY  234 (307)
T ss_dssp             CCTTSTTBCCSSTTCSHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSCSCCCTT---HHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCccCCCCCcccchHHHHHHHHHHHhccceeEEEEecCCCceEEecCCCCCCCCCc---hHHHHHHHHHHHHHhHHhc
Confidence            6888   9999999999999999999988 5899999999999999999998776542   23333332222222211  


Q ss_pred             -cCCccccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         246 -NIPTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       246 -~~~~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                       ..+..+..+..+|+++|++.||+  .+.++++|+|+++.   +.|+|.+
T Consensus       235 ~~~y~~g~~~~~~Y~~~G~~~Dw~y~~~~~~s~T~El~~~---g~~gf~~  281 (307)
T d1m4la_         235 GTSYKYGSIITTIYQASGGSIDWSYNQGIKYSFTFELRDT---GRYGFLL  281 (307)
T ss_dssp             CCCCEEEEHHHHSCCCCSCHHHHHHHTTCCEEEEEEESCS---SSSTTSC
T ss_pred             CCCcccCcccCccccCCCcHHhhhhhCCCcEEEEEEeCCC---CCCCCCC
Confidence             22334444567899999999999  47889999999987   6777775

>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]

Probab=100.00  E-value=1.9e-52  Score=435.97  Aligned_cols=265  Identities=20%  Similarity=0.237  Sum_probs=219.2

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHH
Q psy8322          19 PAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREII   98 (651)
Q Consensus        19 ~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~   98 (651)
                      ....++|++||||+||.++|++|+++||+++++.+||+|+|||+|++|+|+++......||.|+|+|++|||||+|++++
T Consensus         3 ~~~~~~f~~Y~ty~ei~~~l~~la~~~p~~v~~~~iG~S~eGR~i~~l~I~~~~~~~~~kp~v~i~~g~Hg~E~~~~~~~   82 (317)
T d1jqga1           3 TRSRLSFDKIHSYEEVDAYLQELAKEFPNVVTVVEGGKSFEGRSIKYLRISTTNFQDASKPVVMMQSLLHCREWVTLPAT   82 (317)
T ss_dssp             CSSCCCSSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTCCEEEEEEECTTTTCCTTSCEEEEEECSSTTCTTHHHHH
T ss_pred             CCCCCCCcCCCCHHHHHHHHHHHHHHCCCceEEEeccCCCCCCeEEEEEEecCCCCCCCCcEEEEccccCccccchHHHH
Confidence            34569999999999999999999999999999999999999999999999987655678999999999999999999999


Q ss_pred             HHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCC-----CCCCccCcCCCCCCCcccCCCCC
Q psy8322          99 LRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGR-----GRNNINNHDLNRQFPDYFRHNRS  171 (651)
Q Consensus        99 l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~-----~r~n~~GvDLNRnf~~~w~~~~s  171 (651)
                      +++++.|+.     ++..+.+|++++|+|||++|||||+++++++|  ||+|     +|.+|+|||||||||++|+...+
T Consensus        83 l~~~~~l~~-----~~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~~~~~knr~~~~~~~~~~~GVDLNRN~~~~w~~~~~  157 (317)
T d1jqga1          83 LYAIHKLVI-----DVTESDLINNIDWIILPVANPDGYVHTFGGDRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASS  157 (317)
T ss_dssp             HHHHHHHHT-----SCCCTHHHHSCEEEEESCSCHHHHHHHHSSCTTCCSCCCCSSSGGGSSCCCCGGGCSSTTTTSSSB
T ss_pred             HHHHHHhhh-----chhHHHHhhcceEEEEeeEcchhceeeeccccccccCCCCCCCCCCcccCCccccCCCCCCCcccC
Confidence            999999996     44567899999999999999999999999888  4444     25689999999999999988777


Q ss_pred             CCCC---CCCCCCCCcHHHHHHHHHHHhCC--cEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhccc
Q psy8322         172 NIPT---LVSTSQSIDPEVQAVIDWMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSN  246 (651)
Q Consensus       172 ~~p~---y~G~~~~sepEt~al~~~~~~~~--~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  246 (651)
                      .+||   |+|+.|||||||+||++++.+++  +.+++|+|+++++++|||++...++    +...+.+....++....+.
T Consensus       158 ~~p~~~~y~G~~p~SEpEt~al~~~~~~~~~~i~~~vd~Hs~g~~i~yP~~~~~~p~----~~~~~~~l~~~~a~ai~~~  233 (317)
T d1jqga1         158 SSVCSDTFHGRSAFSEPESSVIRDIIAEHRNRMALYLDIHSFGSMILYGYGNGVLPS----NALQLHLIGVQMAQAIDRV  233 (317)
T ss_dssp             CCTTSTTBCCSSTTCSHHHHHHHHHHHHTTTTEEEEEEEEESSSEEEESCTTSCCCT----THHHHHHHHHHHHHHHHTT
T ss_pred             CCCCccccCCCCccccHHHHHHHHHHHHhccceEEEEeeccCCceEEecCCCCCCCC----CHHHHHHHHHHHHHHHHHh
Confidence            8898   99999999999999999999985  7789999999999999999876442    1223332222222222111


Q ss_pred             ------CCccccccccccccchhhhccc--CCCCeEEEEEeeCceecccC-CCcc
Q psy8322         247 ------IPTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASY-PYDS  292 (651)
Q Consensus       247 ------~~~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y-~~~~  292 (651)
                            .+..++.+..+||++|++.||+  .+.++++++|+++..-.+.| ||.+
T Consensus       234 ~~~~g~~y~~g~~~~~lY~~~G~~~Dw~y~~~~~~s~t~El~~~~~~~~~~GF~~  288 (317)
T d1jqga1         234 KWSSNKDYIVGNIFHVLYAASGGASDYAMQAAAPFSYTYELPAYRNSVWFDGFLV  288 (317)
T ss_dssp             CCTTSCCCEEEEHHHHSCCCCSCHHHHHHHHTCSEEEEEEECCCCCSSCCSSSCC
T ss_pred             hhccCCCcccccccccccCCCccHHHHHhhcCCcEEEEEEecccCCCCCccCCCC
Confidence                  1333344567899999999999  47899999999764222333 6776

>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=8e-52  Score=430.30  Aligned_cols=263  Identities=22%  Similarity=0.323  Sum_probs=224.2

Q ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHH
Q psy8322          19 PAAGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREII   98 (651)
Q Consensus        19 ~~~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~   98 (651)
                      .+..++|.+||||+||.++|++|+++||+++++.+||+|+|||+|++++|+++    ..||.|+++|++||+||+|++++
T Consensus         2 ~~~~~~~~~Y~ty~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~l~i~~~----~~kp~v~~~~~~H~~E~~~~~~~   77 (307)
T d1ayea1           2 RSGNFNFGAYHTLEEISQEMDNLVAEHPGLVSKVNIGSSFENRPMNVLKFSTG----GDKPAIWLDAGIHAREWVTQATA   77 (307)
T ss_dssp             TTSCCCSSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECSS----SSCCEEEEEECSSTTCHHHHHHH
T ss_pred             CCCCCCCCCCCCHHHHHHHHHHHHHHCCCceEEEEeeECCCCCeEEEEEEeCC----CCCcEEEEEecccCCCccHHHHH
Confidence            35679999999999999999999999999999999999999999999999985    46899999999999999999999


Q ss_pred             HHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCC---CCCCccCcCCCCCCCcccCCCC-CC
Q psy8322          99 LRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGR---GRNNINNHDLNRQFPDYFRHNR-SN  172 (651)
Q Consensus        99 l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~---~r~n~~GvDLNRnf~~~w~~~~-s~  172 (651)
                      +++++.|+++| +.++.++.||++++|+|||++||||++++++.++  ||+|   .+.+|.||||||||++.|...+ +.
T Consensus        78 l~~~~~l~~~~-~~~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~r~~r~~~~~~~~~GVDlNRNf~~~w~~~~~~~  156 (307)
T d1ayea1          78 LWTANKIVSDY-GKDPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASS  156 (307)
T ss_dssp             HHHHHHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBC
T ss_pred             HHHHHHHHhhh-cccHHHHHHhhCCeEEEEEeeccchhhheeccccccccCCcCCCCCcccccCcccCCCccCCCCCCCC
Confidence            99999999998 7899999999999999999999999999998877  4544   3577999999999999998765 56


Q ss_pred             CCC---CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcc---
Q psy8322         173 IPT---LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS---  245 (651)
Q Consensus       173 ~p~---y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---  245 (651)
                      +||   |+|+.|+|||||+||++++.++ ++.+++++|+++.+++|||+++...+++   ...+.....++++...+   
T Consensus       157 ~p~~~~y~G~~p~sepEt~al~~~i~~~~~~~~~i~~Hs~~~~i~~P~~~~~~~~~d---~~~~~~~~~~~a~~i~~~~~  233 (307)
T d1ayea1         157 NPCSDSYHGPSANSEVEVKSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTKLDD---FDELSEVAQKAAQSLRSLHG  233 (307)
T ss_dssp             CTTSTTBCCSSTTCSHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSSCSCCTT---HHHHHHHHHHHHHHHHHHHC
T ss_pred             CCCccccCCCCCCcHHHHHHHHHHHHhcCceEEEEEecCCCcEEEecCCCCCCCCCC---HHHHHHHHHHHHHHHHHhcC
Confidence            888   9999999999999999999887 5999999999999999999998776542   22222222222222211   


Q ss_pred             cCCccccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         246 NIPTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       246 ~~~~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      .-+..++.+..+|+++|++.||+  .+.++++|+|+++.   +.+||++
T Consensus       234 ~~y~~g~~~~~~Y~~~G~~~Dw~y~~~~~~~~T~El~~~---~~~gf~~  279 (307)
T d1ayea1         234 TKYKVGPICSVIYQASGGSIDWSYDYGIKYSFAFELRDT---GRYGFLL  279 (307)
T ss_dssp             CCCEEEEHHHHTCCCSSCHHHHHHHTTCSEEEEEEESCS---SSSTTSC
T ss_pred             CCcccCCccccceecCCchhhhhhhCCCeEEEEEEeCCC---CCCCCcC
Confidence            22333444577899999999999  47899999999887   6788876

>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm (Helicoverpa zea) [TaxId: 7113]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Corn earworm (Helicoverpa zea) [TaxId: 7113]

Probab=100.00  E-value=5.4e-52  Score=431.98  Aligned_cols=261  Identities=22%  Similarity=0.262  Sum_probs=215.0

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLL  102 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~  102 (651)
                      ++|++||||+||.++|++|+++||+++++.+||+|+|||+|++|+|+++......||.|+|+|++||+||+|++++++++
T Consensus         1 ~~~~~Y~t~~ei~~~l~~l~~~~p~~v~~~~iG~S~eGr~i~~~~i~~~~~~~~~kp~v~i~~~~H~~E~~~~~~~l~~i   80 (312)
T d2c1ca1           1 LPYDNYQELEVIDEYLDYIGEKYPDVATVVNAAESFEGRPIKYIKISTTNFEDENKPVIFIDGGIHAREWISPPSVTWAI   80 (312)
T ss_dssp             CCCSSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEECTTTTCCTTSCEEEEEECSSTTCTTHHHHHHHHH
T ss_pred             CCccccCCHHHHHHHHHHHHHHCCCceEEEeeeECCCCCeEEEEEEeCCCCCCCCCcEEEEecccCCCCccHHHHHHHHH
Confidence            57999999999999999999999999999999999999999999999876556789999999999999999999999999


Q ss_pred             HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC------CCCccCcCCCCCCCcccCCCC-CCC
Q psy8322         103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG------RNNINNHDLNRQFPDYFRHNR-SNI  173 (651)
Q Consensus       103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~------r~n~~GvDLNRnf~~~w~~~~-s~~  173 (651)
                      +.|+++     +..+.+|++++|+|||++|||||+++++++|  ||+|.      +.+|.|||||||||+.|...+ +.+
T Consensus        81 ~~l~~~-----~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~~~~rk~r~~~~~~~~~~~~GvDlNRNf~~~w~~~~~s~~  155 (312)
T d2c1ca1          81 HKLVED-----VTENDLLEKFDWILLPVVNPDGYKYTFTNERFWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNS  155 (312)
T ss_dssp             HHHHTS-----CCCTHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCSSGGGGTSCCCCGGGCSSSSTTSSSCBSC
T ss_pred             HHHhhc-----hhhhhhhcceeEEEEeeeccchhhhhhhcccccccCCCCCCCCccccccccccccCCCCCcCCCCCCCC
Confidence            999874     4456899999999999999999999999888  45443      245899999999999999765 578


Q ss_pred             CC---CCCCCCCCcHHHHHHHHHHHhC--CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcccC-
Q psy8322         174 PT---LVSTSQSIDPEVQAVIDWMNSV--PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRSNI-  247 (651)
Q Consensus       174 p~---y~G~~~~sepEt~al~~~~~~~--~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-  247 (651)
                      ||   |+|+.|||||||+|+++++.++  ++.+++++|+++++++|||+++...+++   ..++.+....+++...+.. 
T Consensus       156 p~~~~y~G~~p~SepEt~av~~~~~~~~~~i~~~l~~Hs~g~~i~~P~~~~~~~~~~---~~~~~~la~~~a~~~~~~~~  232 (312)
T d2c1ca1         156 PCSDIYAGTSAFSEVETRVVRDILHEHLARMALYLTMHSFGSMILYPWGHDGSLSQN---ALGLHTVGVAMASVIQSNAL  232 (312)
T ss_dssp             TTSTTBCCSSTTCSHHHHHHHHHHHHHGGGEEEEEEEEESSSEEEESCTTTCCCCTT---HHHHHHHHHHHHHHHHTTSC
T ss_pred             CCccccCCCCcccChHHHHHHHHHHhcccceeEEEEecCCCceEEecccCCCCCCCC---HHHHHHHHHHHHHHHHHhcC
Confidence            98   8999999999999999999987  4788999999999999999998876542   2233222222222221111 


Q ss_pred             -----Cccccccccc-cccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         248 -----PTLVSTSQSI-DPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       248 -----~~~~~~~~~~-~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                           +..++.+..+ ||++|++.||+  .++|+++|+||++.+ .+.|+|.+
T Consensus       233 ~~~~~y~~G~~~~~~~Y~~~G~s~Dw~y~~~~~~s~t~EL~~~~-~g~~gF~~  284 (312)
T d2c1ca1         233 PNFPPYTVGNSALVIGYYIAGSSEDYAHSIGVPLSYTYELPGLS-SGWDGFHL  284 (312)
T ss_dssp             TTSCCCEEEEHHHHHSSCCSSCHHHHHHHTTCSEEEEEEECCSS-SSGGGGSC
T ss_pred             CCCCceeeccccceeeecCCccHHHHHhhCCCCEEEEEEecCCC-CCCCCCCC
Confidence                 2233334444 99999999999  488999999995421 15788776

>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=3.9e-51  Score=424.22  Aligned_cols=260  Identities=20%  Similarity=0.306  Sum_probs=221.1

Q ss_pred             CCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHH
Q psy8322          23 MSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLL  102 (651)
Q Consensus        23 ~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~  102 (651)
                      ++|++||||+||.++|++|+++||+++++.+||+|+|||+|++++|+++.   ..||.|+|+|++||+||+|++++++++
T Consensus         2 ~~~~~Y~ty~ei~~~l~~l~~~~p~~v~~~~iG~S~egr~i~~~~i~~~~---~~kp~v~i~~~~Hg~E~~~~~~~l~~~   78 (304)
T d1z5ra1           2 HSYEKYNNWETIEAWTKQVTSENPDLISRTAIGTTFLGNNIYLLKVGKPG---PNKPAIFMDCGFHAREWISHAFCQWFV   78 (304)
T ss_dssp             CCTTSCCCHHHHHHHHHHHHHHCTTTEEEEEEEECTTSCEEEEEEESCCC---SSCCEEEEECCSSTTCHHHHHHHHHHH
T ss_pred             CCcCcCCCHHHHHHHHHHHHHHCCCceEEEEeeECCCCCeEEEEEEcCCC---CCCcEEEEeccCCCCCcccHHHHHHHH
Confidence            68999999999999999999999999999999999999999999999863   569999999999999999999999999


Q ss_pred             HHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CCCCC-
Q psy8322         103 EHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SNIPT-  175 (651)
Q Consensus       103 ~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~p~-  175 (651)
                      ++|+..| +.|+.+++||++++|+|||++||||+++.++.++  ||++.   ..+|.||||||||++.|...+ +.+|| 
T Consensus        79 ~~l~~~~-~~~~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~~rk~~~~~~~~~~~GvDlNRNf~~~w~~~~~~~~p~~  157 (304)
T d1z5ra1          79 REAVLTY-GYESHMTEFLNKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCD  157 (304)
T ss_dssp             HHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTSSCBCCCGGGCSSSSTTSSSCBSCTTS
T ss_pred             HHhHhhc-cchHHHHHHHhcCeEEEEeeeccccchheeeccccccccCCCCCCCccccCCcccccCCCCCcCCCCCCCcc
Confidence            9999998 7899999999999999999999999999998887  55443   356899999999999998876 56888 


Q ss_pred             --CCCCCCCCcHHHHHHHHHHHhCC--cEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcc---cCC
Q psy8322         176 --LVSTSQSIDPEVQAVIDWMNSVP--FVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS---NIP  248 (651)
Q Consensus       176 --y~G~~~~sepEt~al~~~~~~~~--~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~  248 (651)
                        |+|+.|+|||||+|+++|+.+++  +.++|++|+++.+++|||+++...+++   ..+++.....+++...+   ..+
T Consensus       158 ~~y~G~~p~SepEt~al~~~~~~~~~~~~~~i~~Hs~g~~i~yP~~~~~~~p~~---~~~~~~~~~~~~~~~~~~~g~~y  234 (304)
T d1z5ra1         158 ETYCGSAAESEKETKALADFIRNNLSSIKAYLTIHSYSQMILYPYSYDYKLPEN---NAELNNLAKAAVKELATLYGTKY  234 (304)
T ss_dssp             TTBCCSSTTCSHHHHHHHHHHHHTTTTEEEEEEEEESSSEEEESCSSSSCCCTT---HHHHHHHHHHHHHHHHHHHCCCC
T ss_pred             cccCCCCccchHHHHHHHHHHHhcccccceEEecCCCCceEEecccCCCCCCCC---HHHHHHHHHHHHHHHHHHhCCCc
Confidence              99999999999999999999874  778999999999999999998766542   22332222222222211   223


Q ss_pred             ccccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         249 TLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       249 ~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      .++..+..+||++|++.||+  .+.++++|+|+++.   +.++|.+
T Consensus       235 ~~g~~~~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~---g~~gf~~  277 (304)
T d1z5ra1         235 TYGPGATTIYPAAGGSDDWAYDQGIKYSFTFELRDK---GRYGFIL  277 (304)
T ss_dssp             EEEEHHHHTCCCSSCHHHHHHHTTCSEEEEEEESCS---SSSTTSC
T ss_pred             ccCCCcceeeecCCCHHHHHhhcCCcEEEEEEeCCC---CCCCCCC
Confidence            33444567899999999999  57799999999987   6787776

>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.6e-49  Score=412.47  Aligned_cols=263  Identities=23%  Similarity=0.383  Sum_probs=221.7

Q ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHcCCcEEEEEeccccCCceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHH
Q psy8322          21 AGMSFGNYHNYDLMREELENFTRVYANMTELYSIGKSVLGKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILR  100 (651)
Q Consensus        21 ~~~~~~~y~~~~ei~~~l~~l~~~~p~~~~~~~iG~S~egr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~  100 (651)
                      +.|+|.+||||+||.++|++|+++||+++++.+||+|.|||+|++++|++++  ...||.|+|+|++||+||+|++++++
T Consensus         2 ~~f~~~~y~ty~ei~~~l~~la~~~p~~~~~~~iG~S~eGr~i~~l~is~~~--~~~kp~v~i~~~~Hg~E~~g~~~~l~   79 (305)
T d2bo9a1           2 NNFNYGAYHSLEAIYHEMDNIAADFPDLARRVKIGHSFENRPMYVLKFSTGK--GVRRPAVWLNAGIHSREWISQATAIW   79 (305)
T ss_dssp             SSCCTTSCCCHHHHHHHHHHHHHHSTTTEEEEEEEECTTCCEEEEEEECSST--TSCCCEEEEEECSSTTCHHHHHHHHH
T ss_pred             CCCCCCCCCCHHHHHHHHHHHHHHCCCceEEEEeeEcCCCCeEEEEEEeCCC--CCCCCEEEEEeeccCCcccHHHHHHH
Confidence            5789999999999999999999999999999999999999999999999875  45789999999999999999999999


Q ss_pred             HHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccc--cCCCC---CCCccCcCCCCCCCcccCCCC-CCCC
Q psy8322         101 LLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNC--RSGRG---RNNINNHDLNRQFPDYFRHNR-SNIP  174 (651)
Q Consensus       101 ~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r--~~~~~---r~n~~GvDLNRnf~~~w~~~~-s~~p  174 (651)
                      +++.|++.+ +.+++++.||++++|+|||++||||+++.+.++|  ||++.   +.+|.||||||||+..|...+ +.+|
T Consensus        80 ~~~~l~~~~-~~~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~r~~~~~~~~~~~~GvDlNRn~~~~~~~~~~~~~p  158 (305)
T d2bo9a1          80 TARKIVSDY-QRDPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNP  158 (305)
T ss_dssp             HHHHHHHHT-TTSHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSSBCCCGGGCSSSSTTSSSSBSCT
T ss_pred             HHHHHHHhc-cccHHHHHHHhcCeEEEEeeccCchhhheeccccccccCCCCCCCCCccccccccccCccCCCCCCCCCC
Confidence            999999998 7799999999999999999999999999998877  45443   578999999999999998765 4567


Q ss_pred             C---CCCCCCCCcHHHHHHHHHHHhC-CcEEEEEEecCceeeeeccccccCCCCCCCCchhhhhhhhHHHHhhcc---cC
Q psy8322         175 T---LVSTSQSIDPEVQAVIDWMNSV-PFVMSLQLHGGNVVASYPYDSFYGESKNNINNHDLNRQFPDYFRHNRS---NI  247 (651)
Q Consensus       175 ~---y~G~~~~sepEt~al~~~~~~~-~~~~~i~~H~~~~~~~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~  247 (651)
                      |   |+|+.|+||||++|+++++.++ ++.+++++|+++.+++|||++.....++   ..++......+.+...+   ..
T Consensus       159 ~~~~~~G~~~~sepEt~a~~~~~~~~~~~~~~i~~Hs~~~~i~~p~~~~~~~~p~---~~~~~~~~~~~~~~~~~~~~~~  235 (305)
T d2bo9a1         159 CSEVYHGPHANSEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPD---AEELDKVARLAAKALASVSGTE  235 (305)
T ss_dssp             TSTTBCCSSTTCSHHHHHHHHHHHHHCCEEEEEEEEESSSEEEESCSSCSSCCTT---HHHHHHHHHHHHHHHHHHHCCC
T ss_pred             ccccccCccccccHHHHHHHHHHhcCCceeEEEEEecCCceEEecCCCCccCCCC---HHHHHHHHHHHHHHHHHhhCCC
Confidence            6   9999999999999999999987 5899999999999999999998766542   22222222222221111   12


Q ss_pred             Cccccccccccccchhhhccc--CCCCeEEEEEeeCceecccCCCcc
Q psy8322         248 PTLVSTSQSIDPEVQAVIDWM--NSVPFVMSLQLHGGNVVASYPYDS  292 (651)
Q Consensus       248 ~~~~~~~~~~~~~~g~~~dw~--~~~p~~~t~el~g~~l~~~y~~~~  292 (651)
                      +..+.....+|+.+|++.||+  ...++.+|+|+++.   ++++|.+
T Consensus       236 ~~~~~~~~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~---g~~gf~~  279 (305)
T d2bo9a1         236 YQVGPTCTTVYPASGSSIDWAYDNGIKFAFTFELRDT---GTYGFLL  279 (305)
T ss_dssp             CEEEEHHHHTCCCCSCHHHHHHHTTCCEEEEEEESCS---SSSTTCC
T ss_pred             cccccccccccccCCchhhhhhhcCCcEEEEEEeCCC---CCCCccC
Confidence            223333467899999999998  47889999999986   6787775

>d1m4la_ c.56.5.1 (A:) Carboxypeptidase A {Cow (Bos taurus) [TaxId: 9913]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cow (Bos taurus) [TaxId: 9913]

Probab=100.00  E-value=8.9e-35  Score=301.32  Aligned_cols=222  Identities=18%  Similarity=0.169  Sum_probs=176.5

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      ..+|..++++..|.    ++       |||+|++|+|++++   ..||+|+++|++|||||+|++++++++++||++|..
T Consensus        27 ~~~p~~v~~~~iG~----S~-------egr~i~~~~is~~~---~~kp~v~~~~~~Hg~E~~~~~~~l~~~~~l~~~~~~   92 (307)
T d1m4la_          27 AEHPQLVSKLQIGR----SY-------EGRPIYVLKFSTGG---SNRPAIWIDLGIHSREWITQATGVWFAKKFTEDYGQ   92 (307)
T ss_dssp             HHCTTTEEEEEEEE----CT-------TSCEEEEEEECSSC---SSCCEEEEEECSSTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHCCCceEEEEccC----CC-------CCCeEEEEEEeCCC---CCCcEEEEeccccCCcchHHHHHHHHHHHHHHhhcc
Confidence            46677788888887    88       99999999999875   468999999999999999999999999999999976


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCC-----CceeEeeccCCCCCC----------------CCCC
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRT-----PPFLISLFLPFPVTK----------------NKPA  407 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~-----~~~gvdlnrnf~~~~----------------~~~~  407 (651)
                       |+.++.||++++|+|||++||||+++.+..++.|||+|.     ++.|||||||||+.|                ..+.
T Consensus        93 -~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~rk~r~~~~~~~~~GvDlNRNf~~~w~~~~~~~~p~~~~y~G~~p~  171 (307)
T d1m4la_          93 -DPSFTAILDSMDIFLEIVTNPDGFAFTHSQNRLWRKTRSVTSSSLCVGVDANRNWDAGFGKAGASSSPCSETYHGKYAN  171 (307)
T ss_dssp             -SHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBCCTTSTTBCCSSTT
T ss_pred             -cHHHHHHHhcCeEEEEcccccccceeeeccccccccCCCCCCCCcccccccccCCCcCCccCCCCCCCCccCCCCCccc
Confidence             899999999999999999999999999999999999975     468999999998654                2456


Q ss_pred             CCCChHHHHHHHHHhhc--cCCCCcC---------CCCCCCCc--------------------cccccCcceeccceEec
Q psy8322         408 LTPDTDVFLHLASTYAR--LHPTMHM---------KRPCPGNT--------------------VLKFENGVTNGAAWYSF  456 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a~--~~~~~~~---------~~~~~~~~--------------------~~~~~~gi~n~~~~y~~  456 (651)
                      ++||.++++.+..++.+  ....+|.         +..|....                    ...+..|.. ...||++
T Consensus       172 sePEtral~~~l~~~~~~~~~i~~Hs~~~~i~~P~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~y~~g~~-~~~~Y~~  250 (307)
T d1m4la_         172 SEVEVKSIVDFVKDHGNFKAFLSIHSYSQLLLYPYGYTTQSIPDKTELNQVAKSAVAALKSLYGTSYKYGSI-ITTIYQA  250 (307)
T ss_dssp             CSHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSCSCCCTTHHHHHHHHHHHHHHHHHHHCCCCEEEEH-HHHSCCC
T ss_pred             chHHHHHHHHHHHhccceeEEEEecCCCceEEecCCCCCCCCCchHHHHHHHHHHHHHhHHhcCCCcccCcc-cCccccC
Confidence            78889998887766531  1111111         01111100                    001111111 1247999


Q ss_pred             cCcccchhhhccceeEEEEEec---ccC-CCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         457 SGGMADYNYLYHGCLELTLEIS---CCR-YPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       457 sG~~~D~~y~~~~~~~~T~El~---~~~-~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      +|+++||+|..+++++||+||+   +++ +||.++|.++|++|+++++.++.++
T Consensus       251 ~G~~~Dw~y~~~~~~s~T~El~~~g~~gf~~p~~~I~~~~~e~~~~~~~~~~~~  304 (307)
T d1m4la_         251 SGGSIDWSYNQGIKYSFTFELRDTGRYGFLLPASQIIPTAQETWLGVLTIMEHT  304 (307)
T ss_dssp             CSCHHHHHHHTTCCEEEEEEESCSSSSTTSCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcHHhhhhhCCCcEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999994   444 4889999999999999999988764

>d1ayea1 c.56.5.1 (A:1-309) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3.6e-34  Score=296.72  Aligned_cols=221  Identities=19%  Similarity=0.211  Sum_probs=176.7

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..++++..|.    ++       |||+|++|+|++++    .||+|+++|++|||||+|++++++++++||++|..
T Consensus        26 ~~~p~~~~~~~iG~----S~-------egr~i~~l~i~~~~----~kp~v~~~~~~H~~E~~~~~~~l~~~~~l~~~~~~   90 (307)
T d1ayea1          26 AEHPGLVSKVNIGS----SF-------ENRPMNVLKFSTGG----DKPAIWLDAGIHAREWVTQATALWTANKIVSDYGK   90 (307)
T ss_dssp             HHCTTTEEEEEEEE----CT-------TSCEEEEEEECSSS----SCCEEEEEECSSTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHCCCceEEEEeeE----CC-------CCCeEEEEEEeCCC----CCcEEEEEecccCCCccHHHHHHHHHHHHHhhhcc
Confidence            35677777777787    88       99999999999865    78999999999999999999999999999999977


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCC----------------CCCC
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTK----------------NKPA  407 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~----------------~~~~  407 (651)
                       |+.+++||++++|+|||++||||++++++.++.|||+|.+     +.|||||||||+.|                ..+.
T Consensus        91 -~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~r~~r~~~~~~~~~GVDlNRNf~~~w~~~~~~~~p~~~~y~G~~p~  169 (307)
T d1ayea1          91 -DPSITSILDALDIFLLPVTNPDGYVFSQTKNRMWRKTRSKVSGSLCVGVDPNRNWDAGFGGPGASSNPCSDSYHGPSAN  169 (307)
T ss_dssp             -SHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSCBCCCGGGCSSSSTTSSSSBCCTTSTTBCCSSTT
T ss_pred             -cHHHHHHhhCCeEEEEEeeccchhhheeccccccccCCcCCCCCcccccCcccCCCccCCCCCCCCCCCccccCCCCCC
Confidence             9999999999999999999999999999999999999875     47999999999654                2446


Q ss_pred             CCCChHHHHHHHHHhhc--cCCCCcCC---------CC---CCCCc-----------------cccccCcceeccceEec
Q psy8322         408 LTPDTDVFLHLASTYAR--LHPTMHMK---------RP---CPGNT-----------------VLKFENGVTNGAAWYSF  456 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a~--~~~~~~~~---------~~---~~~~~-----------------~~~~~~gi~n~~~~y~~  456 (651)
                      ++||+++++.+..++..  ....+|..         ..   +++..                 ...+..|. ....||++
T Consensus       170 sepEt~al~~~i~~~~~~~~~i~~Hs~~~~i~~P~~~~~~~~~d~~~~~~~~~~~a~~i~~~~~~~y~~g~-~~~~~Y~~  248 (307)
T d1ayea1         170 SEVEVKSIVDFIKSHGKVKAFIILHSYSQLLMFPYGYKCTKLDDFDELSEVAQKAAQSLRSLHGTKYKVGP-ICSVIYQA  248 (307)
T ss_dssp             CSHHHHHHHHHHHHHCCEEEEEEEEESSCEEEESCSSSCSCCTTHHHHHHHHHHHHHHHHHHHCCCCEEEE-HHHHTCCC
T ss_pred             cHHHHHHHHHHHHhcCceEEEEEecCCCcEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCcccCC-ccccceec
Confidence            78999999887766521  11112211         01   11000                 01111111 22457999


Q ss_pred             cCcccchhhhccceeEEEEEec---ccC-CCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         457 SGGMADYNYLYHGCLELTLEIS---CCR-YPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       457 sG~~~D~~y~~~~~~~~T~El~---~~~-~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      +|+++||+|..+++++||+||+   +++ +||.++|..+++||+.+++.++.++
T Consensus       249 ~G~~~Dw~y~~~~~~~~T~El~~~~~~gf~~p~~~i~~~~~e~~~~~~~~~~~v  302 (307)
T d1ayea1         249 SGGSIDWSYDYGIKYSFAFELRDTGRYGFLLPARQILPTAEETWLGLKAIMEHV  302 (307)
T ss_dssp             SSCHHHHHHHTTCSEEEEEEESCSSSSTTSCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CCchhhhhhhCCCeEEEEEEeCCCCCCCCcCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999994   444 4999999999999999999988765

>d1z5ra1 c.56.5.1 (A:6-308) Carboxypeptidase B {Pig (Sus scrofa) [TaxId: 9823]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Pig (Sus scrofa) [TaxId: 9823]

Probab=100.00  E-value=2.5e-34  Score=297.34  Aligned_cols=221  Identities=17%  Similarity=0.149  Sum_probs=175.4

Q ss_pred             CCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccC
Q psy8322         270 SVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRG  349 (651)
Q Consensus       270 ~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~  349 (651)
                      .+|..++++..|.    ++       |||+|++|+|+++.   ..||.|+++|++|||||+|++++++++++|+.+|+. 
T Consensus        23 ~~p~~v~~~~iG~----S~-------egr~i~~~~i~~~~---~~kp~v~i~~~~Hg~E~~~~~~~l~~~~~l~~~~~~-   87 (304)
T d1z5ra1          23 ENPDLISRTAIGT----TF-------LGNNIYLLKVGKPG---PNKPAIFMDCGFHAREWISHAFCQWFVREAVLTYGY-   87 (304)
T ss_dssp             HCTTTEEEEEEEE----CT-------TSCEEEEEEESCCC---SSCCEEEEECCSSTTCHHHHHHHHHHHHHHHHHTTT-
T ss_pred             HCCCceEEEEeeE----CC-------CCCeEEEEEEcCCC---CCCcEEEEeccCCCCCcccHHHHHHHHHHhHhhccc-
Confidence            5576778888887    88       99999999998753   469999999999999999999999999999999977 


Q ss_pred             ChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCCC----------------CCCC
Q psy8322         350 DSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTKN----------------KPAL  408 (651)
Q Consensus       350 d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~~----------------~~~~  408 (651)
                      |+.+++||++++|+|||++||||+++.++.++.|||+|.+     +.|||||||||+.|.                .+.+
T Consensus        88 ~~~~~~ll~~~~~~ivP~~NPDG~~~~~~~~~~~rk~~~~~~~~~~~GvDlNRNf~~~w~~~~~~~~p~~~~y~G~~p~S  167 (304)
T d1z5ra1          88 ESHMTEFLNKLDFYVLPVLNIDGYIYTWTKNRMWRKTRSTNAGTTCIGTDPNRNFDAGWCTTGASTDPCDETYCGSAAES  167 (304)
T ss_dssp             SHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTSSCBCCCGGGCSSSSTTSSSCBSCTTSTTBCCSSTTC
T ss_pred             hHHHHHHHhcCeEEEEeeeccccchheeeccccccccCCCCCCCccccCCcccccCCCCCcCCCCCCCcccccCCCCccc
Confidence            8999999999999999999999999999999999999875     479999999987552                3468


Q ss_pred             CCChHHHHHHHHHhhcc---CCCCcCC------------CCCCCC-----------------ccccccCcceeccceEec
Q psy8322         409 TPDTDVFLHLASTYARL---HPTMHMK------------RPCPGN-----------------TVLKFENGVTNGAAWYSF  456 (651)
Q Consensus       409 ~~~~~~f~~l~~~~a~~---~~~~~~~------------~~~~~~-----------------~~~~~~~gi~n~~~~y~~  456 (651)
                      +||++++..+..++...   ...+|..            ..+...                 ....+..| .....|||+
T Consensus       168 epEt~al~~~~~~~~~~~~~~i~~Hs~g~~i~yP~~~~~~~p~~~~~~~~~~~~~~~~~~~~~g~~y~~g-~~~~~~Y~~  246 (304)
T d1z5ra1         168 EKETKALADFIRNNLSSIKAYLTIHSYSQMILYPYSYDYKLPENNAELNNLAKAAVKELATLYGTKYTYG-PGATTIYPA  246 (304)
T ss_dssp             SHHHHHHHHHHHHTTTTEEEEEEEEESSSEEEESCSSSSCCCTTHHHHHHHHHHHHHHHHHHHCCCCEEE-EHHHHTCCC
T ss_pred             hHHHHHHHHHHHhcccccceEEecCCCCceEEecccCCCCCCCCHHHHHHHHHHHHHHHHHHhCCCcccC-CCcceeeec
Confidence            89999999888765211   1111210            111110                 00111111 112337999


Q ss_pred             cCcccchhhhccceeEEEEEec---cc-CCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         457 SGGMADYNYLYHGCLELTLEIS---CC-RYPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       457 sG~~~D~~y~~~~~~~~T~El~---~~-~~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      +|+++||+|..+++++||+||+   .+ ++||.++|..+++|++.++..++.+.
T Consensus       247 ~G~~~Dw~y~~~~~~~~t~El~~~g~~gf~~p~~~I~~~~~E~~~~i~~~~~~v  300 (304)
T d1z5ra1         247 AGGSDDWAYDQGIKYSFTFELRDKGRYGFILPESQIQATCEETMLAIKYVTNYV  300 (304)
T ss_dssp             SSCHHHHHHHTTCSEEEEEEESCSSSSTTSCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCHHHHHhhcCCcEEEEEEeCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999995   33 45889999999999999998887654

>d2c1ca1 c.56.5.1 (A:7-309) Carboxypeptidase B {Corn earworm (Helicoverpa zea) [TaxId: 7113]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase B
species: Corn earworm (Helicoverpa zea) [TaxId: 7113]

Probab=100.00  E-value=4.2e-34  Score=296.49  Aligned_cols=222  Identities=20%  Similarity=0.154  Sum_probs=175.3

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..++++..|.    ++       |||+|++|+|+++...+..||.|+++|++|||||+|++++++++++|++++  
T Consensus        21 ~~~p~~v~~~~iG~----S~-------eGr~i~~~~i~~~~~~~~~kp~v~i~~~~H~~E~~~~~~~l~~i~~l~~~~--   87 (312)
T d2c1ca1          21 EKYPDVATVVNAAE----SF-------EGRPIKYIKISTTNFEDENKPVIFIDGGIHAREWISPPSVTWAIHKLVEDV--   87 (312)
T ss_dssp             HHCTTTEEEEEEEE----CT-------TSCEEEEEEECTTTTCCTTSCEEEEEECSSTTCTTHHHHHHHHHHHHHTSC--
T ss_pred             HHCCCceEEEeeeE----CC-------CCCeEEEEEEeCCCCCCCCCcEEEEecccCCCCccHHHHHHHHHHHHhhch--
Confidence            35677778888887    88       999999999998775667899999999999999999999999999999754  


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC--------ceeEeeccCCCCCCC----------------
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP--------PFLISLFLPFPVTKN----------------  404 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~--------~~gvdlnrnf~~~~~----------------  404 (651)
                         ..++||++++|+|||++||||++++++.++.|||+|.+        ++|||||||||+.|.                
T Consensus        88 ---~~~~ll~~~~~~iiP~~NPDG~~~~~~~~~~~rk~r~~~~~~~~~~~~GvDlNRNf~~~w~~~~~s~~p~~~~y~G~  164 (312)
T d2c1ca1          88 ---TENDLLEKFDWILLPVVNPDGYKYTFTNERFWRKTRSTNNNPLSQICRGADGNRNFDFVWNSIGTSNSPCSDIYAGT  164 (312)
T ss_dssp             ---CCTHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCCCSSGGGGTSCCCCGGGCSSSSTTSSSCBSCTTSTTBCCS
T ss_pred             ---hhhhhhcceeEEEEeeeccchhhhhhhcccccccCCCCCCCCccccccccccccCCCCCcCCCCCCCCCCccccCCC
Confidence               44689999999999999999999999999999999875        369999999987543                


Q ss_pred             CCCCCCChHHHHHHHHHhhcc---CCCCcCC---------CCCC--CC---------------------ccccccCccee
Q psy8322         405 KPALTPDTDVFLHLASTYARL---HPTMHMK---------RPCP--GN---------------------TVLKFENGVTN  449 (651)
Q Consensus       405 ~~~~~~~~~~f~~l~~~~a~~---~~~~~~~---------~~~~--~~---------------------~~~~~~~gi~n  449 (651)
                      .+.++||+++++.+..++...   +..+|..         ..+.  ..                     ....+..|..+
T Consensus       165 ~p~SepEt~av~~~~~~~~~~i~~~l~~Hs~g~~i~~P~~~~~~~~~~~~~~~~la~~~a~~~~~~~~~~~~~y~~G~~~  244 (312)
T d2c1ca1         165 SAFSEVETRVVRDILHEHLARMALYLTMHSFGSMILYPWGHDGSLSQNALGLHTVGVAMASVIQSNALPNFPPYTVGNSA  244 (312)
T ss_dssp             STTCSHHHHHHHHHHHHHGGGEEEEEEEEESSSEEEESCTTTCCCCTTHHHHHHHHHHHHHHHHTTSCTTSCCCEEEEHH
T ss_pred             CcccChHHHHHHHHHHhcccceeEEEEecCCCceEEecccCCCCCCCCHHHHHHHHHHHHHHHHHhcCCCCCceeecccc
Confidence            346778999999988765211   1111210         0011  00                     00123334444


Q ss_pred             ccceEeccCcccchhhhccceeEEEEEeccc------CCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         450 GAAWYSFSGGMADYNYLYHGCLELTLEISCC------RYPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       450 ~~~~y~~sG~~~D~~y~~~~~~~~T~El~~~------~~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      ...||+++|+++||+|..+++++||+||++.      +.||.++|.++.+|..++++.++..+
T Consensus       245 ~~~~Y~~~G~s~Dw~y~~~~~~s~t~EL~~~~~g~~gF~~p~~~I~p~~~E~~~~~~~~~~~~  307 (312)
T d2c1ca1         245 LVIGYYIAGSSEDYAHSIGVPLSYTYELPGLSSGWDGFHLPPQYIEQVCRETWEGIVVGARRA  307 (312)
T ss_dssp             HHHSSCCSSCHHHHHHHTTCSEEEEEEECCSSSSGGGGSCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             ceeeecCCccHHHHHhhCCCCEEEEEEecCCCCCCCCCCCCHHHhhHHHHHHHHHHHHHHHHH
Confidence            4567999999999999999999999999642      35899999999999999999887654

>d1jqga1 c.56.5.1 (A:1-310) Carboxypeptidase A {Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Cotton bollworm (Helicoverpa armigera) [TaxId: 29058]

Probab=100.00  E-value=5.8e-34  Score=295.88  Aligned_cols=221  Identities=20%  Similarity=0.207  Sum_probs=174.7

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      ..+|..++++..|.    ++       |||+|++|+|+++...+..||.|+++|++|||||+|++++++++++|+.    
T Consensus        27 ~~~p~~v~~~~iG~----S~-------eGR~i~~l~I~~~~~~~~~kp~v~i~~g~Hg~E~~~~~~~l~~~~~l~~----   91 (317)
T d1jqga1          27 KEFPNVVTVVEGGK----SF-------EGRSIKYLRISTTNFQDASKPVVMMQSLLHCREWVTLPATLYAIHKLVI----   91 (317)
T ss_dssp             HHCTTTEEEEEEEE----CT-------TCCEEEEEEECTTTTCCTTSCEEEEEECSSTTCTTHHHHHHHHHHHHHT----
T ss_pred             HHCCCceEEEeccC----CC-------CCCeEEEEEEecCCCCCCCCcEEEEccccCccccchHHHHHHHHHHhhh----
Confidence            35677788888887    88       9999999999987766678999999999999999999999999999996    


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-------ceeEeeccCCCCCCC---------------CC
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-------PFLISLFLPFPVTKN---------------KP  406 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-------~~gvdlnrnf~~~~~---------------~~  406 (651)
                       |+..++||++++|+|||++||||++++++++|+|+|+|.+       +.|||||||||+.|.               .+
T Consensus        92 -~~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~~~~~knr~~~~~~~~~~~GVDLNRN~~~~w~~~~~~~p~~~~y~G~~p  170 (317)
T d1jqga1          92 -DVTESDLINNIDWIILPVANPDGYVHTFGGDRYWRKNRATGYMAGNLCMGVDLNRNFGMNWGTASSSSVCSDTFHGRSA  170 (317)
T ss_dssp             -SCCCTHHHHSCEEEEESCSCHHHHHHHHSSCTTCCSCCCCSSSGGGSSCCCCGGGCSSTTTTSSSBCCTTSTTBCCSST
T ss_pred             -chhHHHHhhcceEEEEeeEcchhceeeeccccccccCCCCCCCCCCcccCCccccCCCCCCCcccCCCCCccccCCCCc
Confidence             4456789999999999999999999999999999999865       479999999997653               34


Q ss_pred             CCCCChHHHHHHHHHhhcc---CCCCcC---------CCCCC-CCc---------------------cccccCcceecc-
Q psy8322         407 ALTPDTDVFLHLASTYARL---HPTMHM---------KRPCP-GNT---------------------VLKFENGVTNGA-  451 (651)
Q Consensus       407 ~~~~~~~~f~~l~~~~a~~---~~~~~~---------~~~~~-~~~---------------------~~~~~~gi~n~~-  451 (651)
                      .++||+++++.+..++...   +..+|.         +..+. ...                     ...+..|  +.. 
T Consensus       171 ~SEpEt~al~~~~~~~~~~i~~~vd~Hs~g~~i~yP~~~~~~p~~~~~~~~l~~~~a~ai~~~~~~~g~~y~~g--~~~~  248 (317)
T d1jqga1         171 FSEPESSVIRDIIAEHRNRMALYLDIHSFGSMILYGYGNGVLPSNALQLHLIGVQMAQAIDRVKWSSNKDYIVG--NIFH  248 (317)
T ss_dssp             TCSHHHHHHHHHHHHTTTTEEEEEEEEESSSEEEESCTTSCCCTTHHHHHHHHHHHHHHHHTTCCTTSCCCEEE--EHHH
T ss_pred             cccHHHHHHHHHHHHhccceEEEEeeccCCceEEecCCCCCCCCCHHHHHHHHHHHHHHHHHhhhccCCCcccc--cccc
Confidence            6789999999998876311   111221         11111 000                     0011111  111 


Q ss_pred             ceEeccCcccchhhhccceeEEEEEecc--------cCCCCCCCcchhhhhchHHHHHHHHhhc
Q psy8322         452 AWYSFSGGMADYNYLYHGCLELTLEISC--------CRYPAPSEIPIHWRSNQNALISWLQQVH  507 (651)
Q Consensus       452 ~~y~~sG~~~D~~y~~~~~~~~T~El~~--------~~~p~~~~i~~~w~~nr~all~~~aqa~  507 (651)
                      ..|+++|+++||+|..+++++||+||++        +++||+++|.++.+|.++++..++.++.
T Consensus       249 ~lY~~~G~~~Dw~y~~~~~~s~t~El~~~~~~~~~~GF~~p~~~I~~~~~E~~~~~~~~~~~a~  312 (317)
T d1jqga1         249 VLYAASGGASDYAMQAAAPFSYTYELPAYRNSVWFDGFLVDPDFIEQAGFETWEGIKVGARAAA  312 (317)
T ss_dssp             HSCCCCSCHHHHHHHHTCSEEEEEEECCCCCSSCCSSSCCCTTSHHHHHHHHHHHHHHHHHHHH
T ss_pred             cccCCCccHHHHHhhcCCcEEEEEEecccCCCCCccCCCCCHHHHHHHHHHHHHHHHHHHHHHH
Confidence            1399999999999999999999999965        2459999999999999999998887654

>d2bo9a1 c.56.5.1 (A:4-307) Carboxypeptidase A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.97  E-value=6.2e-33  Score=288.09  Aligned_cols=224  Identities=18%  Similarity=0.167  Sum_probs=177.8

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..++.+..|.    ++       |||+|++|+||+++  +..||+|++.|++|||||+|++++++++++|+.+|..
T Consensus        24 ~~~p~~~~~~~iG~----S~-------eGr~i~~l~is~~~--~~~kp~v~i~~~~Hg~E~~g~~~~l~~~~~l~~~~~~   90 (305)
T d2bo9a1          24 ADFPDLARRVKIGH----SF-------ENRPMYVLKFSTGK--GVRRPAVWLNAGIHSREWISQATAIWTARKIVSDYQR   90 (305)
T ss_dssp             HHSTTTEEEEEEEE----CT-------TCCEEEEEEECSST--TSCCCEEEEEECSSTTCHHHHHHHHHHHHHHHHHTTT
T ss_pred             HHCCCceEEEEeeE----cC-------CCCeEEEEEEeCCC--CCCCCEEEEEeeccCCcccHHHHHHHHHHHHHHhccc
Confidence            35566677777787    88       99999999999876  4578999999999999999999999999999999977


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCC-----ceeEeeccCCCCCC----------------CCCC
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTP-----PFLISLFLPFPVTK----------------NKPA  407 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~-----~~gvdlnrnf~~~~----------------~~~~  407 (651)
                       +++++.||++++|+|||++||||+++.+.+++.|||+|.+     +.|||||||||+.+                ..+.
T Consensus        91 -~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~r~~~~~~~~~~~~GvDlNRn~~~~~~~~~~~~~p~~~~~~G~~~~  169 (305)
T d2bo9a1          91 -DPAITSILEKMDIFLLPVANPDGYVYTQTQNRLWRKTRSRNPGSSCIGADPNRNWNASFAGKGASDNPCSEVYHGPHAN  169 (305)
T ss_dssp             -SHHHHHHHHHCEEEEESCSCHHHHHHHHHTCTTCCSCCCBCTTCSSBCCCGGGCSSSSTTSSSSBSCTTSTTBCCSSTT
T ss_pred             -cHHHHHHHhcCeEEEEeeccCchhhheeccccccccCCCCCCCCCccccccccccCccCCCCCCCCCCccccccCcccc
Confidence             8999999999999999999999999999999999998763     57999999998654                2456


Q ss_pred             CCCChHHHHHHHHHhhc--cCCCCcCCC------------CCCCCc----------------cccccCcceeccceEecc
Q psy8322         408 LTPDTDVFLHLASTYAR--LHPTMHMKR------------PCPGNT----------------VLKFENGVTNGAAWYSFS  457 (651)
Q Consensus       408 ~~~~~~~f~~l~~~~a~--~~~~~~~~~------------~~~~~~----------------~~~~~~gi~n~~~~y~~s  457 (651)
                      ++||.+++..+...+..  ....+|...            .++...                .............||+++
T Consensus       170 sepEt~a~~~~~~~~~~~~~~i~~Hs~~~~i~~p~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Y~~~  249 (305)
T d2bo9a1         170 SEVEVKSVVDFIQKHGNFKGFIDLHSYSQLLMYPYGYSVKKAPDAEELDKVARLAAKALASVSGTEYQVGPTCTTVYPAS  249 (305)
T ss_dssp             CSHHHHHHHHHHHHHCCEEEEEEEEESSSEEEESCSSCSSCCTTHHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHTCCCC
T ss_pred             ccHHHHHHHHHHhcCCceeEEEEEecCCceEEecCCCCccCCCCHHHHHHHHHHHHHHHHHhhCCCcccccccccccccC
Confidence            88899999988876621  111122110            011000                000111123345689999


Q ss_pred             CcccchhhhccceeEEEEEecc---c-CCCCCCCcchhhhhchHHHHHHHHhh
Q psy8322         458 GGMADYNYLYHGCLELTLEISC---C-RYPAPSEIPIHWRSNQNALISWLQQV  506 (651)
Q Consensus       458 G~~~D~~y~~~~~~~~T~El~~---~-~~p~~~~i~~~w~~nr~all~~~aqa  506 (651)
                      |+++||+|..++++++|+||+.   + +.||.++|.++++||+.+++.++.+.
T Consensus       250 G~~~Dw~y~~~~~~~~t~El~~~g~~gf~~~~~~i~~~~~e~~~~i~~~~~~i  302 (305)
T d2bo9a1         250 GSSIDWAYDNGIKFAFTFELRDTGTYGFLLPANQIIPTAEETWLGLKTIMEHV  302 (305)
T ss_dssp             SCHHHHHHHTTCCEEEEEEESCSSSSTTCCCGGGHHHHHHHHHHHHHHHHHHH
T ss_pred             CchhhhhhhcCCcEEEEEEeCCCCCCCccCCHHHhHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999999953   3 34899999999999999999988764

>d1uwya2 c.56.5.1 (A:1-296) Carboxypeptidase M, catalytic domain {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase M, catalytic domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=6e-28  Score=248.38  Aligned_cols=142  Identities=34%  Similarity=0.564  Sum_probs=127.6

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      ..+|..+++...|.    ++       |||+|++|+||+++ .....||+|+|+|++|||||+|++++++++++||++|+
T Consensus        20 ~~~p~~~~~~~iG~----S~-------eGr~i~~l~i~~~~~~~~~~kp~v~~~~giHa~E~~g~~~~~~~~~~L~~~~~   88 (296)
T d1uwya2          20 QNYSSVTHLHSIGK----SV-------KGRNLWVLVVGRFPKEHRIGIPEFKYVANMHGDETVGRELLLHLIDYLVTSDG   88 (296)
T ss_dssp             HHTTTSEEEEEEEE----CT-------TSCEEEEEEESSSTTSCBTTBCEEEEEECCSTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHCCCceEEEEeEE----CC-------CCCeEEEEEEeCCCCCccCCCceEEEEeccCCCCccHHHHHHHHHHHHhhccc
Confidence            35566677777777    88       99999999999877 45568999999999999999999999999999999997


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCC--CCCCCCCChHHHHHHHHHh
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTK--NKPALTPDTDVFLHLASTY  422 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~--~~~~~~~~~~~f~~l~~~~  422 (651)
                      + |++++.||++++|+|||++||||+++++++++.|+++|.|+.|||||||||+.+  ..+.++||+++++.+..++
T Consensus        89 ~-d~~~~~ll~~~~i~ivP~~NPDG~~~~~~~~~~~~~~r~n~~GvDlNRNf~~~~~g~~~~sepEt~av~~~~~~~  164 (296)
T d1uwya2          89 K-DPEITNLINSTRIHIMPSMNPDGFEAVKKPDCYYSIGRENYNQYDLNRNFPDAFEYNNVSRQPETVAVMKWLKTE  164 (296)
T ss_dssp             T-SHHHHHHHHHCEEEEESCSCHHHHHHCSSCCSSCCSCSSCTTSCCTTSCSCCSSSCCCCCCCHHHHHHHHHHHHS
T ss_pred             c-CHHHHHhhhcceEEEEeeecCchHhhcccccccccCccCCCccccCccccccccCCCccccHHHHHHHHHHHHhC
Confidence            6 999999999999999999999999999999999999999999999999998665  4567788898988888765

>d1h8la2 c.56.5.1 (A:4-304) Carboxypeptidase D, catalytic domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Pancreatic carboxypeptidases
domain: Carboxypeptidase D, catalytic domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

Probab=99.92  E-value=3e-26  Score=236.66  Aligned_cols=142  Identities=36%  Similarity=0.594  Sum_probs=127.0

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCC-ccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAP-VHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYI  347 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~-~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~  347 (651)
                      ..+|..+++...|.    ++       |||+|++|+|++++ .....||.|+++|++|||||+|++++++++++||++|+
T Consensus        25 ~~~p~~~~~~~iG~----S~-------egr~i~~l~i~~~~~~~~~~kp~v~i~~~~H~~E~~g~~~~~~~~~~L~~~~~   93 (301)
T d1h8la2          25 NEYPSITRLYSVGK----SV-------ELRELYVMEISDNPGIHEAGEPEFKYIGNMHGNEVVGRELLLNLIEYLCKNFG   93 (301)
T ss_dssp             HHCTTTEEEEEEEE----CT-------TCCEEEEEEESSSTTCCCTTCCEEEEECCSSTTCCHHHHHHHHHHHHHHHHTT
T ss_pred             HHCCCcEEEEEccC----CC-------CCCeEEEEEEeCCCCCCcCCCCEEEEeCCCCCCchHHHHHHHHHHHHHHhccc
Confidence            35677777777777    88       99999999999877 45567999999999999999999999999999999998


Q ss_pred             cCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEeeccCCCCCCC--CCCCCCChHHHHHHHHHh
Q psy8322         348 RGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLISLFLPFPVTKN--KPALTPDTDVFLHLASTY  422 (651)
Q Consensus       348 ~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvdlnrnf~~~~~--~~~~~~~~~~f~~l~~~~  422 (651)
                      + ++++++||++++|+|||++||||+++.+.++|.|+++|.|+.|||||||||+.+.  ...++||.++++.+..++
T Consensus        94 ~-~~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~~~~~~~~~n~~gvDlNRnf~~~~~g~~~~sepEt~a~~~~~~~~  169 (301)
T d1h8la2          94 T-DPEVTDLVQSTRIHIMPSMNPDGYEKSQEGDRGGTVGRNNSNNYDLNRNFPDQFFQVTDPPQPETLAVMSWLKTY  169 (301)
T ss_dssp             T-CHHHHHHHHHCEEEEESCSCHHHHHTCCTTCSSCCTTTSCTTSCCGGGCSCCSSSCCCSCCCHHHHHHHHHHHHS
T ss_pred             c-cHHHHHHhhccEEEEEeeeCCCHHHhcccccccccccCCCCccccCccccccccCCCCcccHHHHHHHHHHHhhc
Confidence            7 8999999999999999999999999999999999999999999999999997654  456778888888877664

>d1obra_ c.56.5.2 (A:) Carboxypeptidase T {Thermoactinomyces vulgaris [TaxId: 2026]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: Carboxypeptidase T
domain: Carboxypeptidase T
species: Thermoactinomyces vulgaris [TaxId: 2026]

Probab=99.90  E-value=4.8e-25  Score=229.56  Aligned_cols=228  Identities=21%  Similarity=0.280  Sum_probs=183.1

Q ss_pred             CCCCeEEEEEeeCceecccCCCcccCCCCcceEEEEeeCCCccCCCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhcc
Q psy8322         269 NSVPFVMSLQLHGGNVVASYPYDSFYGESKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIR  348 (651)
Q Consensus       269 ~~~p~~~t~el~g~~l~~~y~~~~~~gegr~i~~l~is~~~~~~~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~  348 (651)
                      +.+|..+++...|.    ++       |||+|++|+||+++.....||.|++.|++|||||+|++++++++++||.+|+.
T Consensus        24 ~~~p~~~~~~~iG~----S~-------~gr~i~~l~is~~~~~~~~kp~v~i~~~~H~~E~~~~~~~l~~~~~l~~~~~~   92 (323)
T d1obra_          24 SNYPNIVKKFSIGK----SY-------EGRELWAVKISDNVGTDENEPEVLYTALHHAREHLTVEMALYTLDLFTQNYNL   92 (323)
T ss_dssp             HHCTTTEEEEEEEE----CT-------TSCEEEEEEESTTTTSCCSSCEEEEEECSSTTCTHHHHHHHHHHHHHHTTBTT
T ss_pred             HHCCCceEEEEeeE----cC-------CCCeEEEEEEeCCCCCCCCCcEEEEecCCCCCcccHHHHHHHHHHHHHhcccc
Confidence            35566677777777    88       99999999999877566789999999999999999999999999999999976


Q ss_pred             CChhhhhcccceeEEEEeccCcCCceeeec--ccccCCCCCCC-----ceeEeeccCCCCCCC-----------------
Q psy8322         349 GDSNIRFLLDNTRIHLLPNLNPDGSELAVE--GNCRSGRGRTP-----PFLISLFLPFPVTKN-----------------  404 (651)
Q Consensus       349 ~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~--~~~~~~kgr~~-----~~gvdlnrnf~~~~~-----------------  404 (651)
                       ++.+++||++++|+|||++||||+++.++  .++.|||+|.+     +.|||||||||+.|+                 
T Consensus        93 -~~~~~~ll~~~~i~iiP~~NPDG~~~~~~~~~~~~~rknr~~~~~~~~~GVDLNRNf~~~w~~~~~~~~~p~~~~y~G~  171 (323)
T d1obra_          93 -DSRITNLVNNREIYIVFNINPDGGEYDISSGSYKSWRKNRQPNSGSSYVGTDLNRNYGYKWGCCGGSSGSPSSETYRGR  171 (323)
T ss_dssp             -BHHHHHHHHHCEEEEECCSCHHHHHHTTTTSSCCCCCSCCCCCTTCSCCCCCGGGCSSTTTTCSSSSBSCTTSTTBCCS
T ss_pred             -hHHHHHHhcCCeEEEEeeechHHHhhhhcccccccccccccccCCCCccCcccccCCCccCCCCCCCCCCCCccccCCC
Confidence             89999999999999999999999998776  47889999854     479999999987552                 


Q ss_pred             CCCCCCChHHHHHHHHHhh-----------ccCCCCcC--------CCCCCCCcc---------------ccccCcceec
Q psy8322         405 KPALTPDTDVFLHLASTYA-----------RLHPTMHM--------KRPCPGNTV---------------LKFENGVTNG  450 (651)
Q Consensus       405 ~~~~~~~~~~f~~l~~~~a-----------~~~~~~~~--------~~~~~~~~~---------------~~~~~gi~n~  450 (651)
                      ...++||+++++.+..++.           +-|.....        ...+.....               ........++
T Consensus       172 ~~~SEPEt~a~~~~~~~~~~~~~~~~~~~i~~Hs~~~~i~~P~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~gy~~~~~  251 (323)
T d1obra_         172 SAFSAPETAAMRDFINSRVVGGKQQIKTLITFHTYSELILYPYGYTYTDVPSDMTQDDFNVFKTMANTMAQTNGYTPQQA  251 (323)
T ss_dssp             STTCSHHHHHHHHHHHTTBCSSSBCEEEEEEEEESSSEEEESCCSCSCSSCTTSCHHHHHHHHHHHHHHHHHHCCEEEEH
T ss_pred             CccchhHHHHHHHHHHHhccccccceeeEEEeccCCceEeecCcCCCCCCCCccchhHHHHHHHHHHHHHhhcCcccccc
Confidence            4467889999999887641           11111100        011111100               0012234567


Q ss_pred             cceEeccCcccchhhhccceeEEEEEecccC-----CCCCCCcchhhhhchHHHHHHHHhhcc
Q psy8322         451 AAWYSFSGGMADYNYLYHGCLELTLEISCCR-----YPAPSEIPIHWRSNQNALISWLQQVHR  508 (651)
Q Consensus       451 ~~~y~~sG~~~D~~y~~~~~~~~T~El~~~~-----~p~~~~i~~~w~~nr~all~~~aqa~~  508 (651)
                      ..||+++|+++||+|...++++||+||+|++     +||+++|..+|++|+++++.++.++..
T Consensus       252 ~~~Y~~~G~~~Dw~y~~~~~~~~t~El~~~~~~~gf~pp~~~i~~~~~~n~~~l~~~~~~a~~  314 (323)
T d1obra_         252 SDLYITDGDMTDWAYGQHKIFAFTFEMYPTSYNPGFYPPDEVIGRETSRNKEAVLYVAEKADC  314 (323)
T ss_dssp             HHHCCCSSCHHHHHHHHHCCEEEEEEESCSSTTTTTCCCGGGHHHHHHTTHHHHHHHHHTTSC
T ss_pred             ceeeeCCCChhhhHhhcCCeEEEEEEEecCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHhhC
Confidence            7899999999999999999999999999875     699999999999999999999988754

>d1h8la1 b.3.2.1 (A:305-383) Carboxypeptidase D C-terminal domain {Crested duck (Lophonetta specularioides) [TaxId: 8836]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Carboxypeptidase regulatory domain-like
family: Carboxypeptidase regulatory domain
domain: Carboxypeptidase D C-terminal domain
species: Crested duck (Lophonetta specularioides) [TaxId: 8836]

Probab=99.56  E-value=2.9e-15  Score=121.92  Aligned_cols=77  Identities=31%  Similarity=0.572  Sum_probs=72.3

Q ss_pred             ceeEEEEc-CCCCcccceEEEEeeeeeeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEEEEEEee
Q psy8322         509 GVKGLVLD-ETGSRLANVSISLAYKNVSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLES  585 (651)
Q Consensus       509 ~i~G~V~D-~~g~pi~~A~V~i~~~~~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~~  585 (651)
                      ||+|+|+| ++|+||++|+|.+.+...++.||.+|.|++.+++|.|+|.+++.||+++++.+.+..+....++|.|.+
T Consensus         1 GI~G~V~d~~tg~pi~~a~V~v~~~~~~~~Td~~G~f~~~l~~G~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~~   78 (79)
T d1h8la1           1 GIWGFVLDATDGRGILNATISVADINHPVTTYKDGDYWRLLVQGTYKVTASARGYDPVTKTVEVDSKGGVQVNFTLSR   78 (79)
T ss_dssp             EEEEEEEETTTCSBCTTCEEEETTEEEEEECCTTSEEEECCCSEEEEEEEECTTBCCEEEEEEECSSCEEECCEEECB
T ss_pred             CcEEEEEECCCCCCcCCeEEEEeCccccEEecCCCCEEEEeecccEEEEEEEEEeccEEEEEEECCCCeEEEEEEEcc
Confidence            68999999 689999999999999999999999999988899999999999999999999999988888889999976

>d1uwya1 b.3.2.1 (A:297-403) Carboxypeptidase M C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Carboxypeptidase regulatory domain-like
family: Carboxypeptidase regulatory domain
domain: Carboxypeptidase M C-terminal domain
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=7.9e-13  Score=113.76  Aligned_cols=79  Identities=29%  Similarity=0.530  Sum_probs=67.4

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee--eeeeeCCCeeEEeeccCceEEEEEEEeeeeeEEEEEEeeCCCc----eEEEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN--VSFMSSQRGEYWRVLMPGIYFIEASKEGYELFRDRIKIPESTS----PVVGAV  582 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~--~~~~Td~~G~f~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~----~~~~~~  582 (651)
                      ||+|+|+|++|+||++|+|.|.+..  ..+.||.+|.|++.+++|.|+|+|+++||+++++.+.+..+..    ..++|.
T Consensus         1 gI~G~V~D~~g~pi~~A~V~i~~~~~~~~~~td~~G~f~~~~~~g~Y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~~d~~   80 (107)
T d1uwya1           1 GVKGQVFDQNGNPLPNVIVEVQDRKHICPYRTNKYGEYYLLLLPGSYIINVTVPGHDPHITKVIIPEKSQNFSALKKDIL   80 (107)
T ss_dssp             SEEEEEECTTSCBCCSCEEEETTCCCSSCCBCCTTCEEEECCCSEEEEEEEECSSSCCEEEEEEECSSCSSSSCEECCEE
T ss_pred             CcEEEEECCCCCCcCcEEEEEEcccccceeecchhheeeeecCCccEEEEEEEEEeeeEEEEEEECCCCcceeeEEEEEE
Confidence            6999999999999999999998765  3578999999988899999999999999999999998875543    457788


Q ss_pred             Eeeee
Q psy8322         583 LESLL  587 (651)
Q Consensus       583 L~~~~  587 (651)
                      |....
T Consensus        81 L~~~~   85 (107)
T d1uwya1          81 LPFQG   85 (107)
T ss_dssp             CSSCC
T ss_pred             ccccc
Confidence            86543

>d1nkga1 b.3.1.2 (A:251-337) Rhamnogalacturonase B, RhgB, middle domain {Aspergillus aculeatus [TaxId: 5053]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Starch-binding domain-like
family: Rhamnogalacturonase B, RhgB, middle domain
domain: Rhamnogalacturonase B, RhgB, middle domain
species: Aspergillus aculeatus [TaxId: 5053]

Probab=99.28  E-value=3.3e-12  Score=105.32  Aligned_cols=78  Identities=13%  Similarity=0.097  Sum_probs=70.5

Q ss_pred             ccceeEEEEcCCCCcccceEEEEeeeeeeeeeCCCeeE-EeeccCceEEEEEEEeeeeeEEEEEEeeCCCceEEEEEEe
Q psy8322         507 HRGVKGLVLDETGSRLANVSISLAYKNVSFMSSQRGEY-WRVLMPGIYFIEASKEGYELFRDRIKIPESTSPVVGAVLE  584 (651)
Q Consensus       507 ~~~i~G~V~D~~g~pi~~A~V~i~~~~~~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy~~~~~~v~v~~~~~~~~~~~L~  584 (651)
                      ...|+|+|+|..+.|+++|.|.+.+...++.||.+|.| +..+++|.|+|+++++||+++++.|.|..++...++|.|+
T Consensus         7 ~GtvsG~V~~~~~~~~~~v~v~~~~~~~~~~Td~~G~f~i~~l~~G~Y~l~v~~~Gy~~~~~~v~v~~g~t~~~ni~~s   85 (87)
T d1nkga1           7 RGKVAGTASGADSSMDWVVHWYNDAAQYWTYTSSSGSFTSPAMKPGTYTMVYYQGEYAVATSSVTVSAGSTTTKNISGS   85 (87)
T ss_dssp             CBEEEEEEESSCTTSCEEEEEECSSCEEEEECCTTCEEECCCBCSEEEEEEEEETTEEEEEEEEEECTTCEEECCEECC
T ss_pred             EEEEEEEEECCCCCcccEEEEEeCCcEEEEEeCCCCcEEEcccCCCCEEEEEEEccccceeeeEEEcCCCEEEEEEEee
Confidence            34599999999889999999999999999999999999 5579999999999999999999999999888877887664

>d1vlfn1 b.3.5.1 (N:196-274) Transhydroxylase beta subunit, BthL, C-terminal domain {Pelobacter acidigallici [TaxId: 35816]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Cna protein B-type domain
family: Cna protein B-type domain
domain: Transhydroxylase beta subunit, BthL, C-terminal domain
species: Pelobacter acidigallici [TaxId: 35816]

Probab=98.87  E-value=2.5e-09  Score=85.74  Aligned_cols=59  Identities=19%  Similarity=0.313  Sum_probs=50.9

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee---eeeeeCCCeeE-EeeccCceEEEEEEEeeeeeEEEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN---VSFMSSQRGEY-WRVLMPGIYFIEASKEGYELFRDRI  569 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~---~~~~Td~~G~f-~~~l~~g~y~l~vs~~Gy~~~~~~v  569 (651)
                      .++|+|.|  |+||++|+|.+.+..   .++.||++|.| +..+++|.|+|++++.||++....+
T Consensus         4 ~~~gi~~~--G~~v~gA~V~L~~~~~~v~~t~Td~~G~F~f~~l~~G~Y~l~is~~Gy~~~~~~v   66 (79)
T d1vlfn1           4 VTAGILVQ--GDCFEGAKVVLKSGGKEVASAETNFFGEFKFDALDNGEYTVEIDADGKSYSDTVV   66 (79)
T ss_dssp             EEEEEEET--TEECTTCEEEEEETTEEEEEEECCTTSEEEEEEECSEEEEEEEEETTEEEEEEEE
T ss_pred             EEeeEEEC--CccccccEEEEECCCCeEEeeEECCCCcEEEEecCCCCEEEEEEEecccceeeEE
Confidence            47899987  899999999998644   56789999999 6779999999999999998876544

>d1yw4a1 c.56.5.7 (A:2-332) Succinylglutamate desuccinylase AstE {Chromobacterium violaceum [TaxId: 536]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Chromobacterium violaceum [TaxId: 536]

Probab=98.63  E-value=4.1e-08  Score=100.30  Aligned_cols=114  Identities=20%  Similarity=0.233  Sum_probs=75.9

Q ss_pred             CCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCcc
Q psy8322          75 QLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNIN  154 (651)
Q Consensus        75 ~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~  154 (651)
                      .++.+.|+|.||+||||..|.+++..+++.|..+.          +.-..-+++|+.||.++....         |.  .
T Consensus        42 ~~~~~~v~lsagvHGNE~~gi~~~~~l~~~l~~~~----------~~~~~~~~~~~~Np~A~~~~~---------R~--~  100 (331)
T d1yw4a1          42 ARGADSVLLSCGVHGNETAPIEVVDGMLTDIAAGQ----------LALNCRLLVMFANLDAIRQGV---------RY--G  100 (331)
T ss_dssp             CTTSCEEEEEECSSTTCCHHHHHHHHHHHHHHHTS----------SCCCSEEEEEECCHHHHHHTS---------SC--S
T ss_pred             CCCCceEEEECcccCChHHHHHHHHHHHHhhhhcc----------cccceEEEEeccCHHHHHhCC---------cc--C
Confidence            45678999999999999999999999999887632          112223577899999998643         43  3


Q ss_pred             CcCCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHh----C-CcEEEEEEecC------ceeeeecccc
Q psy8322         155 NHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNS----V-PFVMSLQLHGG------NVVASYPYDS  218 (651)
Q Consensus       155 GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~----~-~~~~~i~~H~~------~~~~~~P~~~  218 (651)
                      ..||||.||-.+...         +.......++.|..++..    . ..++.+|+|+.      ..++++|+-.
T Consensus       101 d~DLNR~f~g~~~~~---------~~~~e~~rA~eL~~~v~~f~~~~~~~d~~lDLHS~~~~s~~~~f~~~p~~~  166 (331)
T d1yw4a1         101 NYDMNRLFNGAHARH---------PELPESVRAAELETLAAEFFAGARARKLHYDLHTAIRGSVFEKFAIYPFLH  166 (331)
T ss_dssp             SSCGGGSTTTGGGGC---------TTCHHHHHHHHHHHHHHHHHHTCSSCEEEEEEEEESSCBSSSSEEEECCCC
T ss_pred             CCcccccCCCccccC---------cCCHHHHHHHHHHHHHHHHhccccccCEEEEccCCCCCCcCCceEEecccc
Confidence            459999998544322         111122333444444443    2 47899999975      2456666654

>d1yw6a1 c.56.5.7 (A:1-322) Succinylglutamate desuccinylase AstE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Escherichia coli [TaxId: 562]

Probab=98.51  E-value=1.5e-07  Score=96.00  Aligned_cols=130  Identities=19%  Similarity=0.159  Sum_probs=80.3

Q ss_pred             HHHcCCcEEEEEeccccC--CceEEEEEEcCCCCCCCCCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHh
Q psy8322          42 TRVYANMTELYSIGKSVL--GKDLLVVNISTAPVHQLGVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFL  119 (651)
Q Consensus        42 ~~~~p~~~~~~~iG~S~e--gr~i~~v~i~~~~~~~~~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~l  119 (651)
                      ..+-|...+...-|.+..  |+-+  +.+...   .+..+.|+|.||+||||..|.+++.++++.|..+.          
T Consensus        10 ~~~~~~~~~~~~~~~~~~~~~~g~--~~~~~~---~~~~~~v~i~aGiHGNE~~Gi~al~~l~~~l~~~~----------   74 (322)
T d1yw6a1          10 TGKKPVITEREINGVRWRWLGDGV--LELTPL---TPPQGALVISAGIHGNETAPVEMLDALLGAISHGE----------   74 (322)
T ss_dssp             HCCCCSBCEEESSSEEEEEEETTE--EEEEES---SCCSCEEEEEECSSSSCCHHHHHHHHHHHHHHTTS----------
T ss_pred             CCCCCcccccccCCeEEEEecCce--EEEeCC---CCCCCeEEEEccccCCcHHHHHHHHHHHHhhhhcc----------
Confidence            334455444444454443  4444  444442   24468999999999999999999999998876421          


Q ss_pred             hcCceEEEEeccCcccccccccccccCCCCCCCccCcCCCCCCCcccCCCCCCCCCCCCCCCCCcHH---HHHHHHHH--
Q psy8322         120 LDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHDLNRQFPDYFRHNRSNIPTLVSTSQSIDPE---VQAVIDWM--  194 (651)
Q Consensus       120 l~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvDLNRnf~~~w~~~~s~~p~y~G~~~~sepE---t~al~~~~--  194 (651)
                      +.-....++|+.||.++....         |..  ..||||-||-.....            ...+|   ++.+..++  
T Consensus        75 ~~~~~~i~~~~~Np~A~~~~~---------R~i--d~DLNR~Fpg~~~~~------------~~s~e~~rA~~l~~~~~~  131 (322)
T d1yw6a1          75 IPLRWRLLVILGNPPALKQGK---------RYC--HSDMNRMFGGRWQLF------------AESGETCRARELEQCLED  131 (322)
T ss_dssp             SCCCSEEEEECCSHHHHTSCC---------C-----CCSTTSSSSSSCCS------------SCCHHHHHHHHHHHHHHH
T ss_pred             cCcceEEEEEecCHHHHHhCC---------CcC--CCCHhhcCCCCcCCC------------cCCHHHHHHHHHHHHHHH
Confidence            111233567899999999543         432  469999998543221            12233   33333333  


Q ss_pred             --HhC--CcEEEEEEecCc
Q psy8322         195 --NSV--PFVMSLQLHGGN  209 (651)
Q Consensus       195 --~~~--~~~~~i~~H~~~  209 (651)
                        .+.  ..++.+|+|+..
T Consensus       132 ~~~~~~~~~d~~lDLHs~~  150 (322)
T d1yw6a1         132 FYDQGKESVRWHLDLHTAI  150 (322)
T ss_dssp             HHHTTCCSCEEEEEEECCS
T ss_pred             HHhcccccceEEEECCCCC
Confidence              232  478999999863

>d2bcoa1 c.56.5.7 (A:4-342) Succinylglutamate desuccinylase AstE {Vibrio parahaemolyticus [TaxId: 670]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Vibrio parahaemolyticus [TaxId: 670]

Probab=98.45  E-value=2.5e-07  Score=94.60  Aligned_cols=108  Identities=19%  Similarity=0.225  Sum_probs=72.6

Q ss_pred             CCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCc
Q psy8322          77 GVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNH  156 (651)
Q Consensus        77 ~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~Gv  156 (651)
                      ..|.|+|.||+||||..|.+++..+++.|..+.          +.-..-.++|+.||-++....         |.  ...
T Consensus        49 ~~~~v~isagvHGnE~~gi~~~~~l~~~l~~~~----------~~~~~~~l~~~~Np~A~~~~~---------R~--~d~  107 (339)
T d2bcoa1          49 ETKNIIISCGIHGDETAPMELVDSIIKDIESGF----------QKVDARCLFIIAHPESTLAHT---------RF--LEE  107 (339)
T ss_dssp             TCCEEEEEECSSTTBCHHHHHHHHHHHHHHTTC----------SCCCSEEEEEECCHHHHHTTS---------SC--SSS
T ss_pred             CCCeEEEEccccCCchHHHHHHHHHHHhhhccc----------cccceEEEEEeeCHHHHHhCC---------Cc--CCC
Confidence            458999999999999999999999999887531          222233567899999998543         43  345


Q ss_pred             CCCCCCCcccCCCCCCCCCCCCCCCCCcHHH---HHHHHHHHhC------CcEEEEEEecC------ceeeeeccccc
Q psy8322         157 DLNRQFPDYFRHNRSNIPTLVSTSQSIDPEV---QAVIDWMNSV------PFVMSLQLHGG------NVVASYPYDSF  219 (651)
Q Consensus       157 DLNRnf~~~w~~~~s~~p~y~G~~~~sepEt---~al~~~~~~~------~~~~~i~~H~~------~~~~~~P~~~~  219 (651)
                      ||||.||-.+              ..+.+|.   +.+..++..+      +..+.+|+|+.      ....+||+-..
T Consensus       108 DLNR~F~g~~--------------~~~~~E~~~a~~l~~~~~~f~~~~~~~~d~~lDLHta~~~s~~~~fa~~p~~~~  171 (339)
T d2bcoa1         108 NLNRLFDEKE--------------HEPTKELAIADTLKLLVRDFYQDTEPKTRWHLDLHCAIRGSKHYTFAVSPKTRH  171 (339)
T ss_dssp             CGGGCSSSSC--------------CCCCHHHHHHHHHHHHHHHHHTTCCGGGEEEEEEEEESSCBSCSEEEEECCCSS
T ss_pred             cccccCCCCC--------------CCCChHHHHHHHHHHHHHHHHhhcccccceecccccccccccCCccccccccCc
Confidence            9999998432              2233444   3344444432      46899999964      22356676553

>d2g9da1 c.56.5.7 (A:3-342) Succinylglutamate desuccinylase AstE {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Vibrio cholerae [TaxId: 666]

Probab=98.34  E-value=5.2e-07  Score=92.24  Aligned_cols=107  Identities=22%  Similarity=0.262  Sum_probs=72.0

Q ss_pred             CCCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCc
Q psy8322          77 GVPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNH  156 (651)
Q Consensus        77 ~k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~Gv  156 (651)
                      ..|.|+|.||+||||..|.+++..+++.|..+.          +.-....++|+.||.++....         |.  ...
T Consensus        50 ~~~~l~isagvHGnE~~gi~~l~~l~~~l~~~~----------~~~~~~~l~~~~Np~A~~~~~---------R~--~d~  108 (340)
T d2g9da1          50 ATKNMVISCGIHGDETAPMELLDKWIDDIVSGF----------QPVAERCLFIMAHPQATVRHV---------RF--IEQ  108 (340)
T ss_dssp             SCCEEEEEECSSSSCCHHHHHHHHHHHHHHSSS----------SCCCSEEEEECCCHHHHHTTS---------SC--SSS
T ss_pred             CCCeEEEEccccCCcHHHHHHHHHHHhhhhccC----------cccceEEEEEccCHHHHHhCC---------cc--CCC
Confidence            458999999999999999999988888876521          222234567899999998532         43  345


Q ss_pred             CCCCCCCcccCCCCCCCCCCCCCCCCCcHHHHH---HHHHHHhC------CcEEEEEEecC------ceeeeecccc
Q psy8322         157 DLNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQA---VIDWMNSV------PFVMSLQLHGG------NVVASYPYDS  218 (651)
Q Consensus       157 DLNRnf~~~w~~~~s~~p~y~G~~~~sepEt~a---l~~~~~~~------~~~~~i~~H~~------~~~~~~P~~~  218 (651)
                      ||||-||-.+              ..+.+|.++   +..++...      .-.+.+|+|..      ....++|+-.
T Consensus       109 DLNR~FpG~~--------------~~~~~E~~~A~~L~~~v~~~~~~~d~~s~~~~DlHtai~~s~~~~fal~p~~~  171 (340)
T d2g9da1         109 NLNRLFDDKP--------------HTPSTELAIADNLKVLLRQFFANTDEHSRWHLDLHCAIRGSKHYSFAVSPKAR  171 (340)
T ss_dssp             CSTTCCSSSC--------------CCCCHHHHHHHHHHHHHHHHTTTCCGGGEEEEEEEEESSCBSSSSEEEECCCS
T ss_pred             CcccCCCCCC--------------CCCcHHHHHHHHHHHHHHHHhcccCccceeeeccceeeccCCcCceeeecccC
Confidence            9999998432              234456554   44555442      35688999954      2345566544

>d2gu2a1 c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Aspartoacylase AspA
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=98.30  E-value=3e-07  Score=92.10  Aligned_cols=101  Identities=21%  Similarity=0.209  Sum_probs=66.6

Q ss_pred             CCeEEEEecccCCChhHHHHHHHHHHHHHHHhccCChhHHHhhcCceEEEEeccCcccccccccccccCCCCCCCccCcC
Q psy8322          78 VPNVKIVGNIHGDEPIGREIILRLLEHLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRNNINNHD  157 (651)
Q Consensus        78 k~~v~i~~~iHg~E~~g~~~~l~~~~~L~~~~~~~d~~~~~ll~~~~~~iiP~~NPDG~~~~~~~~r~~~~~r~n~~GvD  157 (651)
                      -|.|+|+||+||||..|.+++..+++.+..           ........++|+.||.+++...         |..  ..|
T Consensus         7 ~~~v~i~gG~HGNE~~Gv~~v~~l~~~~~~-----------~~~~~~~~~~~i~NP~A~~~~~---------Ryi--d~D   64 (307)
T d2gu2a1           7 IKKIAIFGGTHGNELTGVFLVTHWLKNGAE-----------VHRAGLEVKPFITNPRAVEKCT---------RYI--DCD   64 (307)
T ss_dssp             CCEEEEEECSSTTCHHHHHHHHHHHHCGGG-----------GCCTTCEEEEEESCHHHHHTTS---------SCS--SSC
T ss_pred             CCeEEEECCccCChhHHHHHHHHHHhchhh-----------hccCCcEEEEEecCHHHHHhCc---------ccC--ccc
Confidence            478999999999999999888666554432           1112335677899999999643         433  479


Q ss_pred             CCCCCCcccCCCCCCCCCCCCCCCCCcHHHHHHHHHHHhC-------CcEEEEEEecC
Q psy8322         158 LNRQFPDYFRHNRSNIPTLVSTSQSIDPEVQAVIDWMNSV-------PFVMSLQLHGG  208 (651)
Q Consensus       158 LNRnf~~~w~~~~s~~p~y~G~~~~sepEt~al~~~~~~~-------~~~~~i~~H~~  208 (651)
                      |||.|+..+-...       + ......|.+.-..+...+       ..++.||+|+.
T Consensus        65 LNR~F~~~~l~~~-------~-~~~~~~E~~rA~eL~~~~g~~~~~~~~d~~iDLHsT  114 (307)
T d2gu2a1          65 LNRVFDLENLSKE-------M-SEDLPYEVRRAQEINHLFGPKNSDDAYDVVFDLHNT  114 (307)
T ss_dssp             GGGCCSHHHHTCC-------C-CTTSCHHHHHHHHHHHHHCCTTSTTSCSEEEEEEEC
T ss_pred             ccccCchhhccCC-------c-cccccHHHHHHHHHHHHhhhhcCCccccEEEEcccC
Confidence            9999974432110       1 112234666666665554       25899999975

>d1yw6a1 c.56.5.7 (A:1-322) Succinylglutamate desuccinylase AstE {Escherichia coli [TaxId: 562]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Escherichia coli [TaxId: 562]

Probab=97.24  E-value=0.00015  Score=73.15  Aligned_cols=69  Identities=19%  Similarity=0.063  Sum_probs=51.4

Q ss_pred             CCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCcee
Q psy8322         313 LGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFL  392 (651)
Q Consensus       313 ~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~g  392 (651)
                      +..+.|++.||+||+|..|.+++..+++.|..+.          +.-....++|+.||.++....         |.  .-
T Consensus        41 ~~~~~v~i~aGiHGNE~~Gi~al~~l~~~l~~~~----------~~~~~~i~~~~~Np~A~~~~~---------R~--id   99 (322)
T d1yw6a1          41 PPQGALVISAGIHGNETAPVEMLDALLGAISHGE----------IPLRWRLLVILGNPPALKQGK---------RY--CH   99 (322)
T ss_dssp             CCSCEEEEEECSSSSCCHHHHHHHHHHHHHHTTS----------SCCCSEEEEECCSHHHHTSCC---------C-----
T ss_pred             CCCCeEEEEccccCCcHHHHHHHHHHHHhhhhcc----------cCcceEEEEEecCHHHHHhCC---------Cc--CC
Confidence            3468999999999999999999999999886432          122334567899999988643         32  23


Q ss_pred             EeeccCCCCC
Q psy8322         393 ISLFLPFPVT  402 (651)
Q Consensus       393 vdlnrnf~~~  402 (651)
                      .||||-||-.
T Consensus       100 ~DLNR~Fpg~  109 (322)
T d1yw6a1         100 SDMNRMFGGR  109 (322)
T ss_dssp             CCSTTSSSSS
T ss_pred             CCHhhcCCCC
Confidence            6999999854

>d2bcoa1 c.56.5.7 (A:4-342) Succinylglutamate desuccinylase AstE {Vibrio parahaemolyticus [TaxId: 670]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Vibrio parahaemolyticus [TaxId: 670]

Probab=97.07  E-value=0.00015  Score=73.34  Aligned_cols=68  Identities=19%  Similarity=0.177  Sum_probs=52.2

Q ss_pred             CCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeE
Q psy8322         314 GVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLI  393 (651)
Q Consensus       314 ~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gv  393 (651)
                      ..|.|++.||+||+|..|.+++..+++.|..+.-          .-..-.++|+.||-++....         |.-  -.
T Consensus        49 ~~~~v~isagvHGnE~~gi~~~~~l~~~l~~~~~----------~~~~~~l~~~~Np~A~~~~~---------R~~--d~  107 (339)
T d2bcoa1          49 ETKNIIISCGIHGDETAPMELVDSIIKDIESGFQ----------KVDARCLFIIAHPESTLAHT---------RFL--EE  107 (339)
T ss_dssp             TCCEEEEEECSSTTBCHHHHHHHHHHHHHHTTCS----------CCCSEEEEEECCHHHHHTTS---------SCS--SS
T ss_pred             CCCeEEEEccccCCchHHHHHHHHHHHhhhcccc----------ccceEEEEEeeCHHHHHhCC---------CcC--CC
Confidence            4689999999999999999999999998876442          22334578899999987533         221  24


Q ss_pred             eeccCCCCC
Q psy8322         394 SLFLPFPVT  402 (651)
Q Consensus       394 dlnrnf~~~  402 (651)
                      ||||.||-.
T Consensus       108 DLNR~F~g~  116 (339)
T d2bcoa1         108 NLNRLFDEK  116 (339)
T ss_dssp             CGGGCSSSS
T ss_pred             cccccCCCC
Confidence            999999754

>d2g9da1 c.56.5.7 (A:3-342) Succinylglutamate desuccinylase AstE {Vibrio cholerae [TaxId: 666]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Vibrio cholerae [TaxId: 666]

Probab=97.05  E-value=0.00017  Score=73.16  Aligned_cols=69  Identities=22%  Similarity=0.210  Sum_probs=52.4

Q ss_pred             CCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCcee
Q psy8322         313 LGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFL  392 (651)
Q Consensus       313 ~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~g  392 (651)
                      ...|.|++.||+||+|+.|.+++-.+++.|..+.          +.-....++|+.||.++....         |..  -
T Consensus        49 ~~~~~l~isagvHGnE~~gi~~l~~l~~~l~~~~----------~~~~~~~l~~~~Np~A~~~~~---------R~~--d  107 (340)
T d2g9da1          49 AATKNMVISCGIHGDETAPMELLDKWIDDIVSGF----------QPVAERCLFIMAHPQATVRHV---------RFI--E  107 (340)
T ss_dssp             SSCCEEEEEECSSSSCCHHHHHHHHHHHHHHSSS----------SCCCSEEEEECCCHHHHHTTS---------SCS--S
T ss_pred             CCCCeEEEEccccCCcHHHHHHHHHHHhhhhccC----------cccceEEEEEccCHHHHHhCC---------ccC--C
Confidence            3568999999999999999999999999886542          223345678899999987533         322  3


Q ss_pred             EeeccCCCCC
Q psy8322         393 ISLFLPFPVT  402 (651)
Q Consensus       393 vdlnrnf~~~  402 (651)
                      .||||-||-.
T Consensus       108 ~DLNR~FpG~  117 (340)
T d2g9da1         108 QNLNRLFDDK  117 (340)
T ss_dssp             SCSTTCCSSS
T ss_pred             CCcccCCCCC
Confidence            4999999754

>d1yw4a1 c.56.5.7 (A:2-332) Succinylglutamate desuccinylase AstE {Chromobacterium violaceum [TaxId: 536]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Succinylglutamate desuccinylase AstE
species: Chromobacterium violaceum [TaxId: 536]

Probab=97.01  E-value=0.00025  Score=71.47  Aligned_cols=69  Identities=19%  Similarity=0.123  Sum_probs=52.6

Q ss_pred             CCCCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCcee
Q psy8322         313 LGVPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFL  392 (651)
Q Consensus       313 ~~~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~g  392 (651)
                      ++.+.|++.||+||+|..|.+++..+++.|..+.-.          -..-.++|+.||.++....         |.  ..
T Consensus        43 ~~~~~v~lsagvHGNE~~gi~~~~~l~~~l~~~~~~----------~~~~~~~~~~Np~A~~~~~---------R~--~d  101 (331)
T d1yw4a1          43 RGADSVLLSCGVHGNETAPIEVVDGMLTDIAAGQLA----------LNCRLLVMFANLDAIRQGV---------RY--GN  101 (331)
T ss_dssp             TTSCEEEEEECSSTTCCHHHHHHHHHHHHHHHTSSC----------CCSEEEEEECCHHHHHHTS---------SC--SS
T ss_pred             CCCceEEEECcccCChHHHHHHHHHHHHhhhhcccc----------cceEEEEeccCHHHHHhCC---------cc--CC
Confidence            466789999999999999999999999998765422          2233577899999997633         22  23


Q ss_pred             EeeccCCCCC
Q psy8322         393 ISLFLPFPVT  402 (651)
Q Consensus       393 vdlnrnf~~~  402 (651)
                      .||||-||-.
T Consensus       102 ~DLNR~f~g~  111 (331)
T d1yw4a1         102 YDMNRLFNGA  111 (331)
T ss_dssp             SCGGGSTTTG
T ss_pred             CcccccCCCc
Confidence            4999999743

>d2gu2a1 c.56.5.7 (A:4-310) Aspartoacylase AspA {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a/b)
fold: Phosphorylase/hydrolase-like
superfamily: Zn-dependent exopeptidases
family: AstE/AspA-like
domain: Aspartoacylase AspA
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=96.53  E-value=0.00043  Score=68.66  Aligned_cols=64  Identities=20%  Similarity=0.133  Sum_probs=46.3

Q ss_pred             CCeEEEeccccCCCcchHHHHHHHHHHHHHhhccCChhhhhcccceeEEEEeccCcCCceeeecccccCCCCCCCceeEe
Q psy8322         315 VPNVKIVGNIHGDEPIGREIILRLLEYLVVEYIRGDSNIRFLLDNTRIHLLPNLNPDGSELAVEGNCRSGRGRTPPFLIS  394 (651)
Q Consensus       315 ~p~v~~~~~iH~~E~~~~~~~~~~~~~l~~~y~~~d~~v~~ll~~~~~~i~P~~NpDG~~~~~~~~~~~~kgr~~~~gvd  394 (651)
                      -|.|++.||+||+|..|..++..+.+.+..           +....-...+|+.||.+++...         |..  -.|
T Consensus         7 ~~~v~i~gG~HGNE~~Gv~~v~~l~~~~~~-----------~~~~~~~~~~~i~NP~A~~~~~---------Ryi--d~D   64 (307)
T d2gu2a1           7 IKKIAIFGGTHGNELTGVFLVTHWLKNGAE-----------VHRAGLEVKPFITNPRAVEKCT---------RYI--DCD   64 (307)
T ss_dssp             CCEEEEEECSSTTCHHHHHHHHHHHHCGGG-----------GCCTTCEEEEEESCHHHHHTTS---------SCS--SSC
T ss_pred             CCeEEEECCccCChhHHHHHHHHHHhchhh-----------hccCCcEEEEEecCHHHHHhCc---------ccC--ccc
Confidence            489999999999999999877776664321           1112335677899999988644         322  369


Q ss_pred             eccCCC
Q psy8322         395 LFLPFP  400 (651)
Q Consensus       395 lnrnf~  400 (651)
                      |||-|+
T Consensus        65 LNR~F~   70 (307)
T d2gu2a1          65 LNRVFD   70 (307)
T ss_dssp             GGGCCS
T ss_pred             ccccCc
Confidence            999996

>d1s9aa_ b.3.6.1 (A:) Chlorocatechol 1,2-dioxygenase {Rhodococcus opacus [TaxId: 37919]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Aromatic compound dioxygenase
family: Aromatic compound dioxygenase
domain: Chlorocatechol 1,2-dioxygenase
species: Rhodococcus opacus [TaxId: 37919]

Probab=96.04  E-value=0.0056  Score=58.48  Aligned_cols=46  Identities=17%  Similarity=0.285  Sum_probs=35.8

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee-------------------eeeeeeCCCeeE-EeeccCceEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK-------------------NVSFMSSQRGEY-WRVLMPGIYF  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~-------------------~~~~~Td~~G~f-~~~l~~g~y~  554 (651)
                      .|+|+|+|.+|+||++|.|.|=-.                   .-...||++|.| +..+.|+.|.
T Consensus       104 ~v~G~V~D~~g~Pi~gA~veiWqad~~G~Y~~~~~~~~~~~~~rG~~~Td~~G~y~F~Ti~P~~Y~  169 (256)
T d1s9aa_         104 RFTGSVRDTSGTPITGAVIDVWHSTNDGNYSFFSPALPDQYLLRGRVVPAEDGSIEFHSIRPVPYE  169 (256)
T ss_dssp             EEEEEEEETTSCBCTTCEEEEECCCTTSCCTTSCTTSCSSCCSEEEECCCTTSEEEEEEECCCCEE
T ss_pred             EEEEEEECCCCCCccCeEEEEEccCCcccccccccCCCCCccceeEEEeCCCCcEEEEEEccCCcC
Confidence            489999999999999999988311                   125679999999 6667776553

>d1dmha_ b.3.6.1 (A:) Catechol 1,2-dioxygenase {Acinetobacter calcoaceticus [TaxId: 471]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Aromatic compound dioxygenase
family: Aromatic compound dioxygenase
domain: Catechol 1,2-dioxygenase
species: Acinetobacter calcoaceticus [TaxId: 471]

Probab=95.43  E-value=0.016  Score=56.68  Aligned_cols=64  Identities=22%  Similarity=0.440  Sum_probs=49.0

Q ss_pred             ceeEEEEcCCCCcccceEEEEeee--------------------eeeeeeCCCeeE-EeeccCceE--------------
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYK--------------------NVSFMSSQRGEY-WRVLMPGIY--------------  553 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~--------------------~~~~~Td~~G~f-~~~l~~g~y--------------  553 (651)
                      .|+|+|+|.+|+||++|.|.|=-.                    .-...||.+|.| +..+.|+.|              
T Consensus       133 ~v~G~V~D~~G~Pi~~A~veiWqad~~G~Y~~~d~~~~~~~~~~rG~~~Td~~G~y~F~TI~P~~Y~iP~dGP~G~LL~a  212 (309)
T d1dmha_         133 ILHGTIFDADGKPLPNAKVEIWHANTKGFYSHFDPTGEQQAFNMRRSIITDENGQYRVRTILPAGYGCPPEGPTQQLLNQ  212 (309)
T ss_dssp             EEEEEEECTTSCBCTTCEEEEEECCTTSCCTTSCTTSCCSTTTTEEEEECCTTSEEEEEEECCCCEECCTTSHHHHHHHH
T ss_pred             EEEEEEECCCCCCcCCceEEEEecCCCceecCcCCCCCCCccCceeEEeeCCCCeEEEEEEccCCCCCCCCCcHHHHHHH
Confidence            489999999999999999998421                    024579999999 777888666              


Q ss_pred             -----------EEEEEEeeeeeEEEEEEee
Q psy8322         554 -----------FIEASKEGYELFRDRIKIP  572 (651)
Q Consensus       554 -----------~l~vs~~Gy~~~~~~v~v~  572 (651)
                                 .+.|++.||.+.+.++-..
T Consensus       213 ~Grh~~RpaHIH~~V~a~G~~~LtTqlyf~  242 (309)
T d1dmha_         213 LGRHGNRPAHIHYFVSADGHRKLTTQINVA  242 (309)
T ss_dssp             TTCCCEECSEEEEEEECTTBCCEEEEEEET
T ss_pred             hcCCCCCCCEEEEEEEecCCCceEEeEEcC
Confidence                       5677888887766666554

>d2b59b2 b.3.2.2 (B:8-103) Cellulosomal scaffolding protein A {Clostridium thermocellum [TaxId: 1515]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Carboxypeptidase regulatory domain-like
family: Pre-dockerin domain
domain: Cellulosomal scaffolding protein A
species: Clostridium thermocellum [TaxId: 1515]

Probab=95.07  E-value=0.018  Score=44.15  Aligned_cols=46  Identities=11%  Similarity=0.107  Sum_probs=40.6

Q ss_pred             cceEEEEeeeeeeeeeCCCeeE-EeeccCce--EEEEEEEeeeeeEEEE
Q psy8322         523 ANVSISLAYKNVSFMSSQRGEY-WRVLMPGI--YFIEASKEGYELFRDR  568 (651)
Q Consensus       523 ~~A~V~i~~~~~~~~Td~~G~f-~~~l~~g~--y~l~vs~~Gy~~~~~~  568 (651)
                      +|-+|.|.|+...++||++|.| +..+|.|.  |+|+++..-|....+.
T Consensus        24 sGF~V~i~GT~l~~vTD~nGYFEI~gvp~~~~~~Tl~Isk~~YL~r~it   72 (96)
T d2b59b2          24 AGFKVEIVGTELYAVTDANGYFEITGVPANASGYTLKISRATYLDRVIA   72 (96)
T ss_dssp             SCCEEEETTSSCEEECCTTSEEEEEEECCEEEEEEEEEECTEECCEEEE
T ss_pred             cCcEEEEEeeEeEEEeccCceEEEecCcCCCcceEEEEcchhhhhheee
Confidence            4668899999999999999999 67799998  9999999999777664

>d2burb1 b.3.6.1 (B:303-540) Protocatechuate-3,4-dioxygenase, beta chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Aromatic compound dioxygenase
family: Aromatic compound dioxygenase
domain: Protocatechuate-3,4-dioxygenase, beta chain
species: Acinetobacter calcoaceticus, adp1 [TaxId: 471]

Probab=94.77  E-value=0.024  Score=53.33  Aligned_cols=47  Identities=28%  Similarity=0.446  Sum_probs=38.2

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee-----------------------eeeeeCCCeeE-EeeccCceEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN-----------------------VSFMSSQRGEY-WRVLMPGIYFI  555 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~-----------------------~~~~Td~~G~f-~~~l~~g~y~l  555 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                       -...||++|.| +..+.||.|.+
T Consensus        77 ~v~G~V~D~~g~Pv~~A~VEiWQada~G~Y~~~~d~~~~~~d~~f~grGr~~TD~~G~y~F~TI~Pg~Yp~  147 (238)
T d2burb1          77 IVHGYVRDQFGRPVKNALVEVWQANASGRYRHPNDQYIGAMDPNFGGCGRMLTDDNGYYVFRTIKPGPYPW  147 (238)
T ss_dssp             EEEEEEEETTSCBCCSCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred             EEEEEEECCCCCCCCCcEEEEEecCCCcccCCccccccCccCCCcceEEEEEeCCCCeEEEEeCCCcccCC
Confidence            4999999999999999999984211                       13579999999 77799998854

>d3pccm_ b.3.6.1 (M:) Protocatechuate-3,4-dioxygenase, beta chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Aromatic compound dioxygenase
family: Aromatic compound dioxygenase
domain: Protocatechuate-3,4-dioxygenase, beta chain
species: Pseudomonas putida [TaxId: 303]

Probab=94.31  E-value=0.022  Score=53.52  Aligned_cols=47  Identities=28%  Similarity=0.441  Sum_probs=37.9

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee-----------------------eeeeeCCCeeE-EeeccCceEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN-----------------------VSFMSSQRGEY-WRVLMPGIYFI  555 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~-----------------------~~~~Td~~G~f-~~~l~~g~y~l  555 (651)
                      .|+|+|+|++|+||++|.|.|=-.+                       -...||++|.| +..+.||.|..
T Consensus        79 ~v~GrV~D~~g~Pv~~a~VEIWQana~G~Y~~~~d~~~~~~d~~f~grGr~~Td~~G~y~F~TI~PG~Yp~  149 (236)
T d3pccm_          79 IVAGRVVDQYGKPVPNTLVEMWQANAGGRYRHKNDRYLAPLDPNFGGVGRCLTDSDGYYSFRTIKPGPYPW  149 (236)
T ss_dssp             EEEEEEEETTSCBCTTCEEEEECCCTTSCCSSTTCCCSSCCCTTCCCEEEEECCTTSEEEEEEECCCCEEE
T ss_pred             EEEEEEECCCCCCcCCcEEEEEecCCCceECCCccccccccCCccceEEEEEcCCCCeEEEEeeCCcCccc
Confidence            4999999999999999999983100                       13579999999 77899998863

>d1cwva1 b.1.14.1 (A:503-596) Invasin {Yersinia pseudotuberculosis [TaxId: 633]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Invasin/intimin cell-adhesion fragments
family: Invasin/intimin cell-adhesion fragments
domain: Invasin
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=94.18  E-value=0.14  Score=40.85  Aligned_cols=54  Identities=22%  Similarity=0.217  Sum_probs=43.1

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee------eeeeeCCCeeEEe---eccCceEEEEEEEeee
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN------VSFMSSQRGEYWR---VLMPGIYFIEASKEGY  562 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~------~~~~Td~~G~f~~---~l~~g~y~l~vs~~Gy  562 (651)
                      .++-+|+|..|.||+++.|.+.-..      ....||.+|.+..   ...+|.++|+++.-|-
T Consensus        21 t~tatv~D~~gnpv~g~~V~f~~~~~~~~~~~~~~Td~~G~a~v~ltst~aG~~~VtAt~~g~   83 (94)
T d1cwva1          21 TVEFTVADFEGKPLAGQEVVITTNNGALPNKITEKTDANGVARIALTNTTDGVTVVTAEVEGQ   83 (94)
T ss_dssp             EEEEEEECTTSCBCCSCEEEEECCTTCBSCEEEEECCTTSEEEEEEBCSSCEEEEEEEEETTE
T ss_pred             EEEEEEEcCCCCCcCCCEEEEEECCCcEEecceeEECCCEEEEEEEEeCCceEEEEEEEECCc
Confidence            4888999999999999999986321      2447999999933   4688999999988763

>d3pcca_ b.3.6.1 (A:) Protocatechuate-3,4-dioxygenase, alpha chain {Pseudomonas putida [TaxId: 303]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Aromatic compound dioxygenase
family: Aromatic compound dioxygenase
domain: Protocatechuate-3,4-dioxygenase, alpha chain
species: Pseudomonas putida [TaxId: 303]

Probab=94.15  E-value=0.044  Score=50.32  Aligned_cols=46  Identities=17%  Similarity=0.266  Sum_probs=35.1

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee-------------------eeeeeCCCeeE-EeeccCceEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN-------------------VSFMSSQRGEY-WRVLMPGIYF  554 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~-------------------~~~~Td~~G~f-~~~l~~g~y~  554 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                   ...+||++|.| +..+.||.|.
T Consensus        50 ~l~G~V~D~~g~Pi~~A~veiWqad~~G~Y~~~~~~~~~~~~~gr~~~t~~~G~~~f~TI~Pg~Y~  115 (200)
T d3pcca_          50 LLLGQVYDGNGHLVRDSFLEVWQADANGEYQDAYNLENAFNSFGRTATTFDAGEWTLHTVKPGVVN  115 (200)
T ss_dssp             EEEEEEECTTSCBCTTCEEEEECCCTTSCCCCBCCTTSSBCSEEEEECCSSSCEEEEEEECCCCEE
T ss_pred             EEEEEEECCCCCCcCceEEEEEecCCCceeccCCCCccccCcccceeecCCCCeEEEEEecCcccc
Confidence            4999999999999999999984211                   12345577999 7778888884

>d1cwva2 b.1.14.1 (A:597-692) Invasin {Yersinia pseudotuberculosis [TaxId: 633]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Invasin/intimin cell-adhesion fragments
family: Invasin/intimin cell-adhesion fragments
domain: Invasin
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=93.54  E-value=0.1  Score=41.77  Aligned_cols=60  Identities=12%  Similarity=0.110  Sum_probs=45.3

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee---eeeeeCCCeeEE---eeccCceEEEEEEEeeeeeEEEE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN---VSFMSSQRGEYW---RVLMPGIYFIEASKEGYELFRDR  568 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~---~~~~Td~~G~f~---~~l~~g~y~l~vs~~Gy~~~~~~  568 (651)
                      .++-+|+|+.|.||++..|.+.-..   ....+|.+|.|.   ....+|.++|.+...|-......
T Consensus        25 tlt~tv~D~~gnpv~g~~V~~~~~~g~~~~~tt~~~G~~t~~lts~~~G~~~vta~~~g~~~~~~~   90 (96)
T d1cwva2          25 TITLELKDTYGDPQAGANVAFDTTLGNMGVITDHNDGTYSAPLTSTTLGVATVTVKVDGAAFSVPS   90 (96)
T ss_dssp             EEEEECBBTTSCBCCSCCEEEEESSSEECCCEECSSSEEEEEEECSSCEEEEEEEEETTEEEEEEE
T ss_pred             EEEEEEEcCCCCCCCCCEEEEEecCCcccccEECCCcEEEEEEECCCceEEEEEEEECCccccccc
Confidence            4788899999999999999986432   245689999993   34677899999988776544333

>d2bura1 b.3.6.1 (A:4-200) Protocatechuate-3,4-dioxygenase, alpha chain {Acinetobacter calcoaceticus, adp1 [TaxId: 471]}

class: All beta proteins
fold: Prealbumin-like
superfamily: Aromatic compound dioxygenase
family: Aromatic compound dioxygenase
domain: Protocatechuate-3,4-dioxygenase, alpha chain
species: Acinetobacter calcoaceticus, adp1 [TaxId: 471]

Probab=93.13  E-value=0.057  Score=49.62  Aligned_cols=45  Identities=22%  Similarity=0.332  Sum_probs=33.1

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee-----------------------eeeeeC-CCeeE-EeeccCceE
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN-----------------------VSFMSS-QRGEY-WRVLMPGIY  553 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~-----------------------~~~~Td-~~G~f-~~~l~~g~y  553 (651)
                      .|+|+|+|.+|+||++|.|.|=-.+                       ..+.|+ ++|.| +..+.||.|
T Consensus        47 ~l~G~V~D~~g~Pi~~a~veiWqad~~G~Y~~~~~~~~~~~d~~f~g~~r~~t~~~~G~~~f~TI~Pg~Y  116 (202)
T d2bura1          47 RLEGQVFDGLGLPLRDVLIEIWQADTNGVYPSQADTQGKQVDPNFLGWGRTGADFGTGFWSFNTIKPGAV  116 (202)
T ss_dssp             EEEECEECTTSCBCSSCEEEEECCCTTSCCSSTTCCSCCCCCTTCCCEEEEECCTTTCCEEEEEECCCCC
T ss_pred             EEEEEEECCCCCCccceEEEEEecCCcccccccccccccccCcccceEEEEeEeCCCCEEEEEEeecccc
Confidence            4999999999999999999983211                       123344 67888 666777776

>d1f00i1 b.1.14.1 (I:658-752) Intimin {Escherichia coli [TaxId: 562]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Invasin/intimin cell-adhesion fragments
family: Invasin/intimin cell-adhesion fragments
domain: Intimin
species: Escherichia coli [TaxId: 562]

Probab=87.39  E-value=0.4  Score=38.07  Aligned_cols=53  Identities=11%  Similarity=0.102  Sum_probs=39.8

Q ss_pred             ceeEEEEcCCCCcccceEEEEeeee-----eeeeeCCCeeE---EeeccCceEEEEEEEeee
Q psy8322         509 GVKGLVLDETGSRLANVSISLAYKN-----VSFMSSQRGEY---WRVLMPGIYFIEASKEGY  562 (651)
Q Consensus       509 ~i~G~V~D~~g~pi~~A~V~i~~~~-----~~~~Td~~G~f---~~~l~~g~y~l~vs~~Gy  562 (651)
                      .++-+|+| .|.||+|..|.+.-..     ....||.+|.+   +....+|.++|+++..|=
T Consensus        22 t~tatv~D-~gnpv~g~~V~~~~~~g~l~~~~~~Td~~G~at~~ltst~aG~~tVtA~v~~~   82 (95)
T d1f00i1          22 TYTVKVMK-GDKPVSNQEVTFTTTLGKLSNSTEKTDTNGYAKVTLTSTTPGKSLVSARVSDV   82 (95)
T ss_dssp             EEEEEEEE-TTEECTTCEEEEEESSSEESCSEEECCTTSEEEEEEECSSCEEECEEEEETTC
T ss_pred             EEEEEEEE-CCcccCCcEEEEEECCCcEecceeEECCCcEEEEEEEcCCceEEEEEEEEcCC
Confidence            48889999 5999999999986322     14578999998   234677888888876553

>d1cwva3 b.1.14.1 (A:693-795) Invasin {Yersinia pseudotuberculosis [TaxId: 633]}

class: All beta proteins
fold: Immunoglobulin-like beta-sandwich
superfamily: Invasin/intimin cell-adhesion fragments
family: Invasin/intimin cell-adhesion fragments
domain: Invasin
species: Yersinia pseudotuberculosis [TaxId: 633]

Probab=83.32  E-value=0.45  Score=38.34  Aligned_cols=55  Identities=15%  Similarity=0.061  Sum_probs=39.9

Q ss_pred             cceeEEEEcCCCCcccceEEEEeeee-----eeeeeCCCeeEE---eeccCceEEEEEEEeee
Q psy8322         508 RGVKGLVLDETGSRLANVSISLAYKN-----VSFMSSQRGEYW---RVLMPGIYFIEASKEGY  562 (651)
Q Consensus       508 ~~i~G~V~D~~g~pi~~A~V~i~~~~-----~~~~Td~~G~f~---~~l~~g~y~l~vs~~Gy  562 (651)
                      ..|+=+|+|..|.||++..|.+.-..     ....||.+|.|.   .....|..+|.++.-|-
T Consensus        27 ~tlt~tv~D~~GNpv~g~~v~~~~~~~~~~~~s~~td~~G~ytatltst~aG~~tVta~v~g~   89 (103)
T d1cwva3          27 STLSFVPVDKNGHFISGMQGLSFTQNGVPVSISPITEQPDSYTATVVGNSVGDVTITPQVDTL   89 (103)
T ss_dssp             EEEEEECBCTTSCBCCSCCSEEEEEEESCCEECCCEECSSCEEEEEECSSCEEEEEEEEETTE
T ss_pred             EEEEEEEEcCCCCCcCCCeEEEEeccCCccccceEeCCCCEEEEEEEcccccEEEEEEEECCE
Confidence            35888999999999999987764321     234678888883   23567778887776664