Psyllid ID: psy8466

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-
Protein Sequence
MTQSTLFEMRFTYPRAIPKKTGDPISIKVDNETVEVSKECKDPKKVANIFNLHYIKVGSSLSENGTHRTAVMELNVEESEDHVGLSPPLYDPSRVIKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDCLEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFSCKSNLT
Secondary Structure (PSIPRED)
cccccccccEEcccccccccccccccccccccccccccccccccccccccccEEEEcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
ccccHHHHHHHHcccccccccccccEEccccccEEEEccccccccEcccccccEccccHHHHHHHHHcccccccccccccccEccccHHHHHcHEcccccccccccccccccEccccHHHHHHHcccccccccccHHHHHHHHHHHHHHHccccccccHHHHHHEEccccEEEcccccccEccccHHHHHHHHcccccccccHccccEccccHHHHHHHHcccccccccHccccEccccHHHHHHHHcccccccccHccccEccccHHHHHHHHcccccccccHccccEccccHHHHHHHHcccccccccHccccEccccHHHHHHHHcccccccccHccccEccccHHHHHHHHccccEEEcccccccEccccHHHHHHHHcccccccccHccccEcccccHHHHHHHccccccEccccccEEEcccccc
Coil and Loop (DISEMBL)
mtqstlfemrftypraipkktgdpisikvdnetvevskeckdpkkvaNIFNLHYIKvgsslsengthrTAVMELnveesedhvglspplydpsrvikhepldipyevivkeeyyegdninvedndlndaVTRDCLEFfkscpkvkvksdherrsINYKCQEKHmklhqgvrykcdlcskkfstKSYLTAHMKLHQGlknkcdlcskefssksYLTEHMKLHQGIknkcdlcskefstkSYLTEHMKLHQGIknkcdlcskefstkSYLTEHMKLHQGIknkcdlcskefstKSYLTEHMKLHQGlknkcdlcskefsrKSYLTEHMKLHQGIknkcdlcskefshksnltkhmnlhqgirykcdlcskefswkghlTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMklhqgitykcglcskefscksnlt
Flexible Loop (DISEMBL)
MTQSTLFEMRFtypraipkktgdpisikvdnetvevskeckdpkkvanIFNLHYIKvgsslsengTHRTAVMELNVEESEDHVGLSPPLYDPSRVIKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDCLEFFkscpkvkvksdherrsINYKcqekhmklhqgvrykCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLhqglknkcdLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQgitykcglcskefscksnlt
Low Complexity Region (SEG)
MTQSTLFEMRFTYPRAIPKKTGDPISIKVDNETVEVSKECKDPKKVANIFNLHYIKVGSSLSENGTHRTAVMELNVEESEDHVGLSPPLYDPSRVIKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDCLEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFSCKSNLT
Disordered region (IsUnstruct)
*********RFTYP*************************CKDPKKVANIFNLHYIKVGSS****************************LYDPSRVIKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDCLEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEF*******
Disordered Region (DISOPRED)
*******************************ETVEVSKECKDPKKVANIFNLHYIKVGSSLSENGTHRTAVMELNVEESEDHVGLSPPLYDPSRVIKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDCLEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFSCKSNL*
Disordered Region (DISEMBL)
MTQSTLFEMRFTYPRAIPKKTGDPISIKVDNETVEVSKECKDPKKVANIFNLHYIKVGSSLSENGTHRTAVMELNVEESEDHVGLSPPLYDPSRVIKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDCLEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFSCKSNLT
Disordered Region (DISPRO)
**QSTLFEMRFTYPRAIPKKTGDPISIKVDNETVEVSKECKDPKKVANIFNLHYIKVGSSLSENGTHRTAVMELNVEESEDHVGLSPPLYDPSRVIKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDCLEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFSC*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MTQSTLFEMRFTYPRAIPKKTGDPISIKVDNETVEVSKECKDPKKVANIFNLHYIKVGSSLSENGTHRTAVMELNVEESEDHVGLSPPLYDPSRVIKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDCLEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFSCKSNLT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	431	2.2.26 [Sep-21-2011]
Q96IR2	970	Zinc finger protein 845 O	yes	N/A	0.624	0.277	0.473	4e-48
Q5R8X1	613	Zinc finger protein 665 O	yes	N/A	0.624	0.438	0.437	2e-47
Q0VAW7	879	Zinc finger protein 112 O	yes	N/A	0.621	0.304	0.410	3e-47
Q9EQB9	759	Zinc finger protein 287 O	no	N/A	0.689	0.391	0.379	3e-47
Q9HBT7	754	Zinc finger protein 287 O	no	N/A	0.621	0.355	0.413	4e-47
A2T812	754	Zinc finger protein 287 O	N/A	N/A	0.621	0.355	0.413	4e-47
Q9UJU3	913	Zinc finger protein 112 O	no	N/A	0.621	0.293	0.420	5e-47
Q9H7R5	613	Zinc finger protein 665 O	no	N/A	0.626	0.440	0.432	8e-47
P51522	516	Zinc finger protein 83 OS	no	N/A	0.626	0.523	0.428	3e-46
Q6ZNG1	722	Zinc finger protein 600 O	no	N/A	0.621	0.371	0.446	3e-46

>sp|Q96IR2|ZN845_HUMAN Zinc finger protein 845 OS=Homo sapiens GN=ZNF845 PE=2 SV=3

 Score =  192 bits (489), Expect = 4e-48,   Method: Compositional matrix adjust.
 Identities = 132/279 (47%), Positives = 162/279 (58%), Gaps = 10/279 (3%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMK 219
           KH  +H G + YKCD+C K F+ K YL  H + H G K  KC+ C K FS +  LT H +
Sbjct: 232 KHQIIHLGAKQYKCDVCGKVFNQKRYLACHRRCHTGKKPYKCNDCGKTFSQELTLTCHHR 291

Query: 220 LHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQG 277
           LH G K+ KC  C K FS  S L  H  +H G K+ KC+ C K FS  SYL  H +LH G
Sbjct: 292 LHTGEKHYKCSECGKTFSRNSALVIHKAIHTGEKSYKCNECGKTFSQTSYLVYHRRLHTG 351

Query: 278 IKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN- 334
            K  KC+ C K FS KS L  H K+H G K  KC+ CS+ FSRKS LT H +LH G K  
Sbjct: 352 EKPYKCEECDKAFSFKSNLERHRKIHTGEKPYKCNECSRTFSRKSSLTRHRRLHTGEKPY 411

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDL 392
           KC+ C K FS  S+L  H  LH G + YKC+ C + FS+K +L  HR++H   K  KC+ 
Sbjct: 412 KCNDCGKTFSQMSSLVYHRRLHTGEKPYKCEECDEAFSFKSNLERHRRIHTGEKPYKCND 471

Query: 393 CSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNL 430
           C K FS    L  H +LH G   YKC  C + FS KSNL
Sbjct: 472 CGKTFSQTSSLVYHRRLHTGEKPYKCEECDEAFSFKSNL 510

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q5R8X1|ZN665_PONAB Zinc finger protein 665 OS=Pongo abelii GN=ZNF665 PE=2 SV=1

 Score =  190 bits (483), Expect = 2e-47,   Method: Compositional matrix adjust.
 Identities = 122/279 (43%), Positives = 159/279 (56%), Gaps = 10/279 (3%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL 220
           H ++H G + YKC+ C K F   S LT H  +H G K  KC+ C K F+  S+L  H ++
Sbjct: 187 HQRIHTGEKPYKCNECGKAFRAHSKLTTHQVIHTGEKPYKCNECGKCFTQNSHLASHRRI 246

Query: 221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 278
           H G K  KC+ C K FS +S LT H  +H G K  KC+ C K F   SYLT+H ++H G 
Sbjct: 247 HTGEKPYKCNECGKAFSVRSSLTTHQTIHTGEKPYKCNECGKVFRHNSYLTKHRRVHTGE 306

Query: 279 KN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-K 335
           K  KC+ C K FS  S LT+H  +H G K  KC+ C K F++ S+L  H ++H G K  +
Sbjct: 307 KPYKCNECGKAFSMHSNLTKHQIIHTGEKPFKCNECVKVFTQYSHLANHRRIHTGEKPYR 366

Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
           CD C K FS +S+LT H  +H G + YKC+ C K F+   HL  HR +H   K  KCD C
Sbjct: 367 CDECGKAFSVRSSLTTHQAIHTGEKPYKCNDCGKVFTQNSHLASHRGIHSGEKPYKCDEC 426

Query: 394 SKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
            K FS    L  H ++H G   YKC  C K FS  S+LT
Sbjct: 427 GKAFSQTSQLARHWRVHTGEKPYKCNECGKAFSVHSSLT 465

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q0VAW7|ZN112_MOUSE Zinc finger protein 112 OS=Mus musculus GN=Znf112 PE=2 SV=2

 Score =  189 bits (480), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 114/278 (41%), Positives = 159/278 (57%), Gaps = 10/278 (3%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL 220
           H ++H G + YKC+ C K FS  +YL  H ++H G K  KC+ C K FS  S+L  H ++
Sbjct: 541 HHRIHTGEKPYKCEECGKGFSRSAYLQGHQRVHTGEKPYKCEECGKGFSRSSHLQGHQRV 600

Query: 221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 278
           H G K  KC+ C K FS    L  H ++H G K  KC  C K FS  S L  H ++H G 
Sbjct: 601 HTGEKPYKCEECGKGFSWSFNLQIHQRVHTGEKPYKCGECGKGFSKASTLLAHERVHTGE 660

Query: 279 KN-KCDLCSKEFSTKSYLTEHMKLHQGLKNK-CDLCSKEFSRKSYLTEHMKLHQGIKN-K 335
           K  +C  C K FS KSYL  H  +H G +   C++C K FS+++YL  H+++H  +K  K
Sbjct: 661 KPYQCHECGKNFSQKSYLQSHQSVHSGERPHICEVCGKGFSQRAYLQGHLRVHTRVKPYK 720

Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
           C++C K FS  S L  H  +H G + +KC+ C+K FS    L  H+++H++ +  KCD C
Sbjct: 721 CEVCGKGFSQGSRLEAHQRVHTGRKPFKCETCTKGFSESSRLQAHQRIHEEGRPYKCDQC 780

Query: 394 SKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNL 430
            K FS    L  H ++H G   YKC +C K FS +SNL
Sbjct: 781 GKGFSGYSSLQAHHRVHTGEKPYKCEVCGKGFSQRSNL 818

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q9EQB9|ZN287_MOUSE Zinc finger protein 287 OS=Mus musculus GN=Znf287 PE=2 SV=2

 Score =  189 bits (480), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 121/319 (37%), Positives = 174/319 (54%), Gaps = 22/319 (6%)

Query: 134 CLEFFKSCPKVKVKSDHERRSINYKCQE------------KHMKLHQGVR-YKCDLCSKK 180
           C + F+  P +    ++  +   Y+C+E             H ++H G + Y+C  C K 
Sbjct: 371 CGKQFRKYPSLLAHRENHAKEKAYECEECGKEFKHLSSLIAHQRMHTGEKPYECHQCGKA 430

Query: 181 FSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTK 238
           FS +++LT H ++H G K  KC+ C K+FS +++LT H + H G K  KC  CSK FS  
Sbjct: 431 FSQRAHLTIHQRIHTGEKPYKCEDCGKDFSQRAHLTIHQRTHTGEKPYKCLECSKTFSHS 490

Query: 239 SYLTEHMKLHQGIKNK-CDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLT 296
           S L  H ++H G K   C+ C K FS  ++L +H K+H G K  KC+ C K FS  +YL 
Sbjct: 491 SSLINHQRVHTGEKPYICNECGKTFSQSTHLLQHQKIHTGKKPYKCNECWKVFSQSTYLI 550

Query: 297 EHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNK-CDLCSKEFSHKSNLTKHMN 354
            H ++H G K  KC  C K F+  S L +H   H G K+  C++C K FS  +NLT+H  
Sbjct: 551 RHQRIHSGEKCYKCTACGKAFAHSSTLIQHQTTHTGEKSYICNVCGKAFSQSANLTQHHR 610

Query: 355 LHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQG 412
            H G + YKC +C K FS   HLT+H+++H   K  KC+ C K +     LT+H ++H G
Sbjct: 611 THTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNTCGKAYRQGANLTQHQRVHTG 670

Query: 413 -ITYKCGLCSKEFSCKSNL 430
              YKC  C K F   S+L
Sbjct: 671 EKPYKCHHCGKAFIYSSSL 689

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q9HBT7|ZN287_HUMAN Zinc finger protein 287 OS=Homo sapiens GN=ZNF287 PE=2 SV=1

 Score =  189 bits (480), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/278 (41%), Positives = 161/278 (57%), Gaps = 10/278 (3%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL 220
           H ++H G + Y+C  C K FS +++LT H ++H G K  KCD C K+FS +++LT H + 
Sbjct: 407 HQRMHTGEKPYECHQCGKAFSQRAHLTIHQRIHTGEKPYKCDDCGKDFSQRAHLTIHQRT 466

Query: 221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKNK-CDLCSKEFSTKSYLTEHMKLHQGI 278
           H G K  KC  C K FS  S L  H ++H G K   C+ C K FS  ++L +H K+H G 
Sbjct: 467 HTGEKPYKCLECGKTFSHSSSLINHQRVHTGEKPYICNECGKTFSQSTHLLQHQKIHTGK 526

Query: 279 KN-KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNK- 335
           K  KC+ C K FS  +YL  H ++H G K  KC+ C K F+  S L +H   H G K+  
Sbjct: 527 KPYKCNECWKVFSQSTYLIRHQRIHSGEKCYKCNECGKAFAHSSTLIQHQTTHTGEKSYI 586

Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
           C++C K FS  +NLT+H   H G + YKC +C K FS   HLT+H+++H   K  KC++C
Sbjct: 587 CNICGKAFSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNIC 646

Query: 394 SKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNL 430
            K +     LT+H ++H G   YKC  C K F   S+L
Sbjct: 647 GKAYRQGANLTQHQRIHTGEKPYKCNECGKAFIYSSSL 684

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|A2T812|ZN287_PONPY Zinc finger protein 287 OS=Pongo pygmaeus GN=ZNF287 PE=3 SV=1

 Score =  189 bits (479), Expect = 4e-47,   Method: Compositional matrix adjust.
 Identities = 115/278 (41%), Positives = 161/278 (57%), Gaps = 10/278 (3%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL 220
           H ++H G + Y+C  C K FS +++LT H ++H G K  KCD C K+FS +++LT H + 
Sbjct: 407 HQRMHTGEKPYECHQCGKAFSQRAHLTIHQRIHTGEKPYKCDDCGKDFSQRAHLTIHQRT 466

Query: 221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKNK-CDLCSKEFSTKSYLTEHMKLHQGI 278
           H G K  KC  C K FS  S L  H ++H G K   C+ C K FS  ++L +H K+H G 
Sbjct: 467 HTGEKPYKCLECGKTFSHSSSLINHQRVHTGEKPYICNECGKTFSQSTHLLQHQKIHTGK 526

Query: 279 KN-KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNK- 335
           K  KC+ C K FS  +YL  H ++H G K  KC+ C K F+  S L +H   H G K+  
Sbjct: 527 KPYKCNECWKVFSQSTYLIRHQRIHSGEKCYKCNECGKAFAHSSTLIQHQTTHTGEKSYI 586

Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
           C++C K FS  +NLT+H   H G + YKC +C K FS   HLT+H+++H   K  KC++C
Sbjct: 587 CNICGKAFSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNIC 646

Query: 394 SKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNL 430
            K +     LT+H ++H G   YKC  C K F   S+L
Sbjct: 647 GKAYRQGANLTQHQRIHTGEKPYKCNECGKAFIYSSSL 684

May be involved in transcriptional regulation.

Pongo pygmaeus (taxid: 9600)

>sp|Q9UJU3|ZN112_HUMAN Zinc finger protein 112 OS=Homo sapiens GN=ZNF112 PE=2 SV=2

 Score =  189 bits (479), Expect = 5e-47,   Method: Compositional matrix adjust.
 Identities = 117/278 (42%), Positives = 161/278 (57%), Gaps = 10/278 (3%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL 220
           H ++H G + YKC++C K F+ +S L  H ++H G K  KC+ C K FS  SYL  H ++
Sbjct: 515 HQRVHTGQKPYKCNICGKGFNHRSVLNVHQRVHTGEKPYKCEECDKGFSRSSYLQAHQRV 574

Query: 221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 278
           H G K  KC+ C K FS  SYL  H ++H G K  KC+ C K FS  S+L  H ++H G 
Sbjct: 575 HTGEKPYKCEECGKGFSRNSYLQGHQRVHTGEKPYKCEECGKGFSRSSHLQGHQRVHTGE 634

Query: 279 KN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-K 335
           K  KC+ C K FS    L  H ++H G K  KC+ C K FS+ S L  H ++H G K  +
Sbjct: 635 KPFKCEECGKGFSWSFNLQIHQRVHTGEKPYKCEECGKGFSKASTLLAHQRVHTGEKPYQ 694

Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
           CD C K FS +S L  H ++H G R Y C++C K FS + +L  H+++H  +K  KC++C
Sbjct: 695 CDECGKSFSQRSYLQSHQSVHSGERPYICEVCGKGFSQRAYLQGHQRVHTRVKPYKCEMC 754

Query: 394 SKEFSSKRILTEHMKLHQGI-TYKCGLCSKEFSCKSNL 430
            K FS    L  H ++H G   YKC +C+K FS  S L
Sbjct: 755 GKGFSQSSRLEAHRRVHTGGKPYKCEVCTKGFSESSRL 792

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9H7R5|ZN665_HUMAN Zinc finger protein 665 OS=Homo sapiens GN=ZNF665 PE=2 SV=2

 Score =  188 bits (477), Expect = 8e-47,   Method: Compositional matrix adjust.
 Identities = 121/280 (43%), Positives = 155/280 (55%), Gaps = 10/280 (3%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMK 219
           KH  +H G + +KC+ C K F+  S+L  H ++H G K  +CD C K FS +S LT H  
Sbjct: 326 KHQIIHTGEKPFKCNECVKVFTQYSHLANHRRIHTGEKPYRCDECGKAFSVRSSLTTHQA 385

Query: 220 LHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQG 277
           +H G K  KC+ C K F+  S+L  H  +H G K  KCD C K FS  S L  H ++H G
Sbjct: 386 IHTGEKPYKCNDCGKVFTQNSHLASHRGIHSGEKPYKCDECGKAFSQTSQLARHWRVHTG 445

Query: 278 IKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN- 334
            K  KC+ C K FS  S LT H  +H G K  KC+ C K F   SYL  H ++H G K  
Sbjct: 446 EKPYKCNECGKAFSVHSSLTIHQTIHTGQKPYKCNDCGKVFRHNSYLAIHQRIHTGEKPY 505

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDL 392
           KC+ C K FS  SNL  H  +H G + YKC+ C K F+   HL  HR++H   K  +C+ 
Sbjct: 506 KCNECGKAFSVHSNLATHQVIHTGEKPYKCNECGKVFTQNSHLANHRRIHTGEKPYRCNE 565

Query: 393 CSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
           C K FS +  LT HM +H G   YKC  C K F+  SNL 
Sbjct: 566 CGKAFSVRSTLTTHMAVHTGDKPYKCNQCGKVFTQNSNLA 605

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P51522|ZNF83_HUMAN Zinc finger protein 83 OS=Homo sapiens GN=ZNF83 PE=2 SV=3

 Score =  186 bits (472), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 120/280 (42%), Positives = 161/280 (57%), Gaps = 10/280 (3%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMK 219
           +H ++H G + YKC+ C K F   S+L  H  +H G K  +C+ C K FS  SYL +H+ 
Sbjct: 194 QHQRIHTGEKPYKCNECGKVFHQISHLAQHRTIHTGEKPYECNKCGKVFSRNSYLVQHLI 253

Query: 220 LHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQG 277
           +H G K  +C++C K F   S+L +H ++H G K  KC+ C K FS KS L  H ++H G
Sbjct: 254 IHTGEKPYRCNVCGKVFHHISHLAQHQRIHTGEKPYKCNECGKVFSHKSSLVNHWRIHTG 313

Query: 278 IKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN- 334
            K  KC+ C K FS KS L  H ++H G K  KC+ C K FSR SYL +H+ +H G K  
Sbjct: 314 EKPYKCNECGKVFSHKSSLVNHWRIHTGEKPYKCNECGKVFSRNSYLAQHLIIHAGEKPY 373

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDL 392
           KCD C K FS  S+L +H  +H G + YKCD C K FS   +L  H ++H   K  KC+ 
Sbjct: 374 KCDECDKAFSQNSHLVQHHRIHTGEKPYKCDECGKVFSQNSYLAYHWRIHTGEKAYKCNE 433

Query: 393 CSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
           C K F     L  H K+H G   +KC  C K FS +S+LT
Sbjct: 434 CGKVFGLNSSLAHHRKIHTGEKPFKCNECGKAFSMRSSLT 473

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZNG1|ZN600_HUMAN Zinc finger protein 600 OS=Homo sapiens GN=ZNF600 PE=1 SV=2

 Score =  186 bits (472), Expect = 3e-46,   Method: Compositional matrix adjust.
 Identities = 124/278 (44%), Positives = 158/278 (56%), Gaps = 10/278 (3%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL 220
           H  +H G + YK + C K FS  S L  H  +H G K  KC +C K F+  SYL +H ++
Sbjct: 432 HKSIHTGEQPYKYEECEKVFSCGSTLETHKIIHTGEKPYKCKVCDKAFACHSYLAKHTRI 491

Query: 221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 278
           H G K  KC+ CSK F  +SYL  H ++H G K  KC+ CSK FS +SYL  H +LH G 
Sbjct: 492 HSGEKPYKCNECSKTFRLRSYLASHRRVHSGEKPYKCNECSKTFSQRSYLHCHRRLHSGE 551

Query: 279 KN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-K 335
           K  KC+ C K FS K  L  H +LH G K+ KC +C K F R SYL  H ++H   K  K
Sbjct: 552 KPYKCNECGKTFSHKPSLVHHRRLHTGEKSYKCTVCDKAFVRNSYLARHTRIHTAEKPYK 611

Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
           C+ C K F+ +S L+ H  +H G + YKC+ C K FS K HL  HR++H   K  KC +C
Sbjct: 612 CNECGKAFNQQSQLSLHHRIHAGEKLYKCETCDKVFSRKSHLKRHRRIHPGKKPYKCKVC 671

Query: 394 SKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNL 430
            K F S   L +H  LH G   YKC  C K FS +S L
Sbjct: 672 DKTFGSDSHLKQHTGLHTGEKPYKCNECGKAFSKQSTL 709

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	431
440905011	790	Zinc finger protein 26, partial [Bos gru	0.633	0.345	0.480	1e-53
328707452	482	PREDICTED: zinc finger protein 79-like [	0.719	0.643	0.413	2e-53
359076015	491	PREDICTED: zinc finger protein 665, part	0.628	0.551	0.455	3e-52
359075997	543	PREDICTED: zinc finger protein 665-like	0.624	0.495	0.448	5e-52
296477336	699	TPA: zinc finger protein 107 [Bos taurus	0.621	0.383	0.460	6e-52
443728181	462	hypothetical protein CAPTEDRAFT_135345 [	0.626	0.584	0.421	2e-51
353233176	486	putative zinc finger protein [Schistosom	0.612	0.543	0.443	2e-51
358417007	925	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.624	0.290	0.448	3e-51
256085592	486	zinc finger protein [Schistosoma mansoni	0.612	0.543	0.439	5e-51
358412956	736	PREDICTED: zinc finger protein 26-like [	0.696	0.407	0.422	7e-51

>gi|440905011|gb|ELR55460.1| Zinc finger protein 26, partial [Bos grunniens mutus]

 Score =  216 bits (551), Expect = 1e-53,   Method: Compositional matrix adjust.
 Identities = 136/283 (48%), Positives = 161/283 (56%), Gaps = 10/283 (3%)

Query: 159 CQEKHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTE 216
           C  KHMK+H G +  KCD+C   F+  SYLT HM+ H G K  KCD C K F++ SYL+ 
Sbjct: 415 CLTKHMKIHTGEKPLKCDICGTTFTQTSYLTQHMRTHTGEKPFKCDKCGKAFAAYSYLSN 474

Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKL 274
           H + H G K  KCD C K F   S L++H K H G K  KCD C K FS  SYL+ HM+ 
Sbjct: 475 HFRTHTGEKPFKCDTCGKTFVQSSGLSQHKKTHTGEKPFKCDTCGKTFSQSSYLSRHMRT 534

Query: 275 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGI 332
           H G K  KCD C K F   S L  H++ H G K  KC+ C K F+R S LT+HMK H G 
Sbjct: 535 HTGEKPYKCDTCGKGFGFSSILRRHLQSHTGEKTAKCEKCGKTFTRASGLTQHMKTHTGE 594

Query: 333 KN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-K 389
           K  KCD C K F+  S LTKH   H G + +KCD C K F+    L EH K H   K  K
Sbjct: 595 KPYKCDKCGKAFADSSCLTKHFRTHTGEKPFKCDKCGKSFAVSSRLIEHMKTHTGEKPFK 654

Query: 390 CDLCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
           CD C K F+    LTEHMK H G   +KC  C K F+  S LT
Sbjct: 655 CDTCGKTFTRSSGLTEHMKTHTGEKPFKCDTCGKTFTRSSGLT 697

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328707452|ref|XP_003243400.1| PREDICTED: zinc finger protein 79-like [Acyrthosiphon pisum]

 Score =  216 bits (551), Expect = 2e-53,   Method: Compositional matrix adjust.
 Identities = 133/322 (41%), Positives = 180/322 (55%), Gaps = 12/322 (3%)

Query: 114 YEGDNINVEDNDLNDAVTRDCLEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVR-Y 172
           +EG ++  E N L   +TR  L+   +C K    +D++           H ++H G + Y
Sbjct: 145 FEGTSVINESNSLK-CITRMNLDLTSNCLKKNQLTDNQDEMSTASNLIVHTRIHTGDKPY 203

Query: 173 KCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDL 230
           KCD+C K FS  S L  H + H G K  KCDLC+  FS K  LT H + H G+K  KCD+
Sbjct: 204 KCDMCDKSFSQLSNLRKHTRTHPGEKPFKCDLCTHAFSHKGDLTNHTRTHTGVKPYKCDI 263

Query: 231 CSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHM-KLHQGIKN-KCDLCSK 287
           C++ FS K+ L  H+ +H G K+ KC +C   F+ K YL  H+ + H G+K  KCD+C++
Sbjct: 264 CNQAFSQKTALKSHITIHTGEKSYKCAICDTGFARKPYLISHIIRKHNGVKPYKCDICNQ 323

Query: 288 EFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSH 345
            F  K  LT H + H GLK  KCD+C K     S L  H + H G+K  KCD+C K F  
Sbjct: 324 SFPQKGDLTSHTRTHTGLKPYKCDICDKGLGSISNLITHTRTHTGVKPFKCDICDKGFVS 383

Query: 346 KSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRIL 403
            S+LTKH  +H G++ YKCD C K F   G L  H K+H  +K  KCD+C K F S   L
Sbjct: 384 SSDLTKHTRIHTGVKPYKCDTCDKWFGSSGDLRRHTKIHTGVKPYKCDICDKWFGSSSDL 443

Query: 404 TEHMKLHQGI-TYKCGLCSKEF 424
             H K+H G+  YKC +C K F
Sbjct: 444 RRHTKIHTGVKPYKCDICDKAF 465

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|359076015|ref|XP_002695358.2| PREDICTED: zinc finger protein 665, partial [Bos taurus]

 Score =  212 bits (540), Expect = 3e-52,   Method: Compositional matrix adjust.
 Identities = 128/281 (45%), Positives = 164/281 (58%), Gaps = 10/281 (3%)

Query: 161 EKHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHM 218
           E H ++H G + YKC++C K FS  S LT H +LH G K  KCD+C K FS  S L  H 
Sbjct: 202 ELHQRIHTGEKPYKCNVCDKAFSHSSNLTVHRRLHAGEKPYKCDICGKGFSVSSSLAVHQ 261

Query: 219 KLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQ 276
           ++H G K  KCD C K F+  + L  H K+H G K+ KCD+C K FS    LT H ++H 
Sbjct: 262 RVHTGEKPYKCDTCGKAFNQTAKLGLHQKIHTGEKSYKCDVCGKAFSRTGNLTVHRRVHT 321

Query: 277 GIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN 334
           G K  KCD+C K F   S L  H ++H G K  KCD+C K FS+ + L  H ++H G K 
Sbjct: 322 GEKPYKCDMCGKAFRVSSNLAVHQRVHTGEKPYKCDVCGKAFSQATGLAVHQRIHTGEKP 381

Query: 335 -KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCD 391
            KCD+C K F+  SNL  H ++H G + YKCD+C K FS  G+L  HR++H   K  KCD
Sbjct: 382 YKCDVCGKAFNQSSNLGIHRSVHTGEKPYKCDVCGKAFSHTGNLAVHRRVHTGEKPYKCD 441

Query: 392 LCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
           +C K FS    L  H +LH G   YKC +C K FS   NL 
Sbjct: 442 VCGKAFSCTGNLAVHRRLHTGEKPYKCDVCGKAFSRTGNLA 482

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|359075997|ref|XP_003587367.1| PREDICTED: zinc finger protein 665-like [Bos taurus]

 Score =  211 bits (537), Expect = 5e-52,   Method: Compositional matrix adjust.
 Identities = 125/279 (44%), Positives = 159/279 (56%), Gaps = 10/279 (3%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL 220
           H ++H G + YKCD+C K FS  S L  H ++H G K  KCD+C K FS  S L  H ++
Sbjct: 91  HRRVHTGEKPYKCDVCGKAFSVNSILVIHWRMHTGEKPYKCDVCGKAFSLNSRLVVHRRV 150

Query: 221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 278
           H G K  KCDLC K FS  + L  H ++H G K  KCDLC K FS  S L  H ++H G 
Sbjct: 151 HTGEKPYKCDLCGKAFSLNARLVVHRRVHTGEKPYKCDLCGKAFSLNSRLVVHRRVHTGE 210

Query: 279 KN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-K 335
           K  KCD+C K FS  S L  H ++H G K  KCD+C K FS+K+  T H  LH G K   
Sbjct: 211 KPYKCDVCGKAFSLNSRLVVHQRVHTGEKPYKCDVCGKAFSQKARCTVHQTLHTGEKPYT 270

Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
           C++C + ++ KS L  H  +H G + +KCD+C K FS    L  HR+LH   K  KCD+C
Sbjct: 271 CEVCGRGYTQKSKLVVHGRIHTGEKPFKCDVCGKAFSVNARLVIHRRLHTGEKPYKCDVC 330

Query: 394 SKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
            K FS    L  H ++H G   YKC +C K FS  S L 
Sbjct: 331 GKAFSVNARLVVHRRVHTGEKPYKCDMCGKAFSRNSGLV 369

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|296477336|tpg|DAA19451.1| TPA: zinc finger protein 107 [Bos taurus]

 Score =  211 bits (537), Expect = 6e-52,   Method: Compositional matrix adjust.
 Identities = 128/278 (46%), Positives = 161/278 (57%), Gaps = 10/278 (3%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL 220
           H K+H G + YKCD+C K FS    LT H ++H G K  KCD+C K F   S L  H ++
Sbjct: 380 HQKIHTGEKSYKCDVCGKAFSRTGNLTVHRRVHTGEKPYKCDMCGKAFRVSSNLAVHQRV 439

Query: 221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 278
           H G K  KCD+C K FS  + L  H ++H G K  KCD+C K F+  + L  H ++H G 
Sbjct: 440 HTGEKPYKCDVCGKAFSQATGLAVHQRIHTGEKPYKCDVCGKAFNHTTRLQLHQRIHTGE 499

Query: 279 KN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-K 335
           K  KC++C K F + + L+ H KLH G K  KCD+C K F   S L  H  +H G K  K
Sbjct: 500 KPYKCNVCDKAFISAANLSVHRKLHTGEKPYKCDICGKGFRVSSNLGIHRSVHTGEKPYK 559

Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
           CD+C K FSH  NL  H  +H G + YKCD+C K FS  G+L  HR+LH   K  KCD+C
Sbjct: 560 CDVCGKAFSHTGNLAVHRRVHTGEKPYKCDVCGKAFSCTGNLAVHRRLHTGEKPYKCDVC 619

Query: 394 SKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNL 430
            K FS    LT H +LH G   YKC +C K FS  SNL
Sbjct: 620 GKAFSHTANLTVHQRLHTGEKAYKCDICGKGFSVSSNL 657

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|443728181|gb|ELU14642.1| hypothetical protein CAPTEDRAFT_135345 [Capitella teleta]

 Score =  209 bits (533), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 118/280 (42%), Positives = 173/280 (61%), Gaps = 10/280 (3%)

Query: 161 EKHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHM 218
           E+H+++H G R ++CD+C K F  K  L  HM++H   +  +CD+C K FS K  L +H 
Sbjct: 165 ERHVQVHTGKRPFECDVCQKTFYQKRVLKRHMRVHTRKRPFECDVCQKTFSQKGNLKQHT 224

Query: 219 KLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQ 276
           ++H G +  +CD+C K FS K +L  HM+LH G K  +CD+C K F+ K  L  H ++H 
Sbjct: 225 RVHTGERPFECDVCQKTFSHKGHLDRHMRLHTGEKPFECDVCQKTFTRKEVLEVHTRVHT 284

Query: 277 GIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN 334
           G +  +CD+C K FS K +L +H+++H G +  +CD+C K FS K +L  H++LH G K 
Sbjct: 285 GERPFECDVCQKTFSNKVHLVQHLRVHTGERPFECDVCQKTFSHKGHLNRHIRLHTGEKP 344

Query: 335 -KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCD 391
            +CD+C K FS K  L +HM +H G R ++CD+C   FS KGHL  H +LH   K  +CD
Sbjct: 345 FECDVCHKTFSRKEVLERHMRVHTGKRPFECDVCQMTFSHKGHLNRHVRLHTGEKPFECD 404

Query: 392 LCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNL 430
           +C K FS K +L  HM++H G   ++C +C   FS K  L
Sbjct: 405 VCHKTFSRKEVLERHMRVHTGKRPFECDVCQMTFSQKKAL 444

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|353233176|emb|CCD80531.1| putative zinc finger protein [Schistosoma mansoni]

 Score =  209 bits (532), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 121/273 (44%), Positives = 182/273 (66%), Gaps = 9/273 (3%)

Query: 168 QGVRYKCDLCSKKFSTKSYLTAHMK-LHQGLKNKCDLCSKEFSSKSYLTEHMK-LHQGIK 225
           +GV+  C  C+K FST++    H+K +H+ +K  C  C ++F++K +L EH K +HQGI 
Sbjct: 118 EGVKPSCAFCNKTFSTRAGRDRHIKSIHKRIKYPCIQCDRKFTTKFHLIEHKKVIHQGIN 177

Query: 226 NKCDLCSKEFSTKSYLTEHMK-LHQGIKNKCDLCSKEFSTKSYLTEHMK-LHQGIKNKCD 283
             CD C + F+TKS L  H+K  H+GIK  C+ C+K+ STK  L  H K +H+GIK+ C+
Sbjct: 178 LSCDKCDRNFTTKSQLNRHIKSAHEGIKYPCNQCNKKLSTKYDLYVHKKVIHEGIKHPCN 237

Query: 284 LCSKEFSTKSYLTEHMKL-HQGLKNKCDLCSKEFSRKSYLTEHMK-LHQGIKNKCDLCSK 341
            C ++F TKS L +H+K+ H+G+   CD C K FS  S L  H++ +HQGIK  C+ C +
Sbjct: 238 QCDRKFGTKSKLNDHIKVAHEGVTFPCDECGKIFSSNSALCRHLQSVHQGIKYPCNQCDR 297

Query: 342 EFSHKSNLTKHMNL-HQGIRYKCDLCSKEFSWKGHLTEHRK-LHQDIKNKCDLCSKEFSS 399
            ++ + +L +H+   H+G+++ CDLC+KEF++K  L EH K +H+ IK  CD CSK+FSS
Sbjct: 298 LYTSRFHLNEHLRANHEGVKFTCDLCNKEFAFKVGLDEHNKNIHKGIKYPCDQCSKKFSS 357

Query: 400 KRILTEHMK-LHQGITYKCGLCSKEFSCKSNLT 431
           K +L  H+K +H+GI Y C  C ++F+CKSNL 
Sbjct: 358 KCMLNIHVKAIHKGIKYICKQCDRKFNCKSNLN 390

Source: Schistosoma mansoni

Species: Schistosoma mansoni

Genus: Schistosoma

Family: Schistosomatidae

Order: Strigeidida

Class: Trematoda

Phylum: Platyhelminthes

Superkingdom: Eukaryota

>gi|358417007|ref|XP_002702019.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 91 [Bos taurus]

 Score =  209 bits (531), Expect = 3e-51,   Method: Compositional matrix adjust.
 Identities = 125/279 (44%), Positives = 161/279 (57%), Gaps = 10/279 (3%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL 220
           H K+H G + YKCD+C K FS    LT H ++H G K  KCD+C K F   S L  H ++
Sbjct: 606 HQKIHTGEKSYKCDVCGKAFSRTGNLTVHRRVHTGEKPYKCDMCGKAFRVSSNLAVHQRV 665

Query: 221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 278
           H G K  KCD+C K FS  + L  H ++H G K  KCD+C K FS  + L  H ++H G 
Sbjct: 666 HTGEKPYKCDVCGKAFSQATGLAVHQRVHTGEKPYKCDMCGKTFSQAAGLAVHQRIHTGE 725

Query: 279 K-NKCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-K 335
           K  KCD+C K FS  + L  H ++H G K  KC++C K FS  + LT H +LH G K  K
Sbjct: 726 KPXKCDICGKAFSHTTRLELHQRIHTGEKPYKCNVCDKAFSHTANLTVHRRLHTGEKPYK 785

Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
           CD+C K F   SNL  H ++H G + YKCD+C K FS  G+L  HR++H   K  KCD+C
Sbjct: 786 CDICGKGFRVSSNLGVHRSVHTGEKPYKCDVCGKAFSHTGNLAVHRRVHTGEKPYKCDVC 845

Query: 394 SKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
            K FS    L  H ++H G   YKC +C K FS   NL 
Sbjct: 846 GKAFSRTGNLAVHRRIHTGEKPYKCDVCGKAFSRTGNLA 884

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|256085592|ref|XP_002579001.1| zinc finger protein [Schistosoma mansoni]

 Score =  208 bits (529), Expect = 5e-51,   Method: Compositional matrix adjust.
 Identities = 120/273 (43%), Positives = 181/273 (66%), Gaps = 9/273 (3%)

Query: 168 QGVRYKCDLCSKKFSTKSYLTAHMK-LHQGLKNKCDLCSKEFSSKSYLTEHMK-LHQGIK 225
           +GV+  C  C+K FST++    H+K +H+ +K  C  C ++F++K +L EH K +HQGI 
Sbjct: 118 EGVKPSCAFCNKTFSTRAGRDRHIKSIHKRIKYPCIQCDRKFTTKFHLIEHKKVIHQGIN 177

Query: 226 NKCDLCSKEFSTKSYLTEHMK-LHQGIKNKCDLCSKEFSTKSYLTEHMK-LHQGIKNKCD 283
             CD C + F+TKS L  H+K  H+GIK  C+ C+K+ STK  L  H K +H+GIK+ C+
Sbjct: 178 LSCDKCDRNFTTKSQLNRHIKSAHEGIKYPCNQCNKKLSTKYDLYVHKKVIHEGIKHPCN 237

Query: 284 LCSKEFSTKSYLTEHMKL-HQGLKNKCDLCSKEFSRKSYLTEHMK-LHQGIKNKCDLCSK 341
            C ++F TKS L +H+K+ H+G+   CD C K FS    L  H++ +HQGIK  C+ C +
Sbjct: 238 QCDRKFGTKSKLNDHIKVAHEGVTFPCDECGKIFSSNGALCRHLQSVHQGIKYPCNQCDR 297

Query: 342 EFSHKSNLTKHMNL-HQGIRYKCDLCSKEFSWKGHLTEHRK-LHQDIKNKCDLCSKEFSS 399
            ++ + +L +H+   H+G+++ CDLC+KEF++K  L EH K +H+ IK  CD CSK+FSS
Sbjct: 298 LYTSRFHLNEHLRANHEGVKFTCDLCNKEFAFKVGLDEHNKNIHKGIKYPCDQCSKKFSS 357

Query: 400 KRILTEHMK-LHQGITYKCGLCSKEFSCKSNLT 431
           K +L  H+K +H+GI Y C  C ++F+CKSNL 
Sbjct: 358 KCMLNIHVKAIHKGIKYICKQCDRKFNCKSNLN 390

Source: Schistosoma mansoni

Species: Schistosoma mansoni

Genus: Schistosoma

Family: Schistosomatidae

Order: Strigeidida

Class: Trematoda

Phylum: Platyhelminthes

Superkingdom: Eukaryota

>gi|358412956|ref|XP_003582435.1| PREDICTED: zinc finger protein 26-like [Bos taurus]

 Score =  207 bits (528), Expect = 7e-51,   Method: Compositional matrix adjust.
 Identities = 136/322 (42%), Positives = 174/322 (54%), Gaps = 22/322 (6%)

Query: 132 RDCLEFFKSCPKVKVKSDHERRSINYKCQE------------KHMKLHQGVR-YKCDLCS 178
           ++C + F S   ++V S        YKCQE            +HM  H G + +KCD C 
Sbjct: 397 KECGKAFGSSSHLRVHSQIHTGIKIYKCQECGKTFTGSSRLIEHMNTHTGEKPFKCDTCG 456

Query: 179 KKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFS 236
           K F+  S LT HMK+H G K  KCD+C   F+  SYLT+HM+ H G K  KCD C K F+
Sbjct: 457 KTFTQSSCLTKHMKIHTGEKPLKCDICGTTFTQTSYLTQHMRTHTGEKPFKCDKCGKAFA 516

Query: 237 TKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSY 294
             SYL+ H + H G K  KCD C K F   S L++H K H G K  KCD C K FS  SY
Sbjct: 517 AYSYLSNHFRTHTGEKPFKCDTCGKTFVQSSGLSQHKKTHTGEKPFKCDTCGKTFSQSSY 576

Query: 295 LTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKH 352
           L+ HM+ H G K  KCD C K F   S L  H++ H G K  KC+ C K F+  S LT+H
Sbjct: 577 LSRHMRTHTGEKPYKCDTCGKGFGFSSILRRHLQSHTGEKTAKCEKCGKTFTRASGLTQH 636

Query: 353 MNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLH 410
           M  H G + YKCD C K F+    LT+H + H   K  KCD C K F+    LT+H + H
Sbjct: 637 MKTHTGEKPYKCDKCGKAFADSSCLTKHFRTHTGEKPFKCDKCGKSFAVSSRLTKHFRTH 696

Query: 411 QG-ITYKCGLCSKEFSCKSNLT 431
            G   ++C  C K F+   ++T
Sbjct: 697 TGEKPFECNTCGKTFTTSLSVT 718

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	431
UNIPROTKB|F1N7M4	754	ZNF560 "Uncharacterized protei	0.624	0.356	0.455	5.5e-61
UNIPROTKB|Q9HBT7	754	ZNF287 "Zinc finger protein 28	0.686	0.392	0.387	9.9e-60
UNIPROTKB|F1MP77	833	F1MP77 "Uncharacterized protei	0.651	0.337	0.431	1.3e-59
UNIPROTKB|Q96IR2	970	ZNF845 "Zinc finger protein 84	0.645	0.286	0.463	2.6e-59
UNIPROTKB|E2RLZ7	761	ZNF287 "Uncharacterized protei	0.686	0.388	0.387	8.8e-59
RGD|1308617	762	Zfp287 "zinc finger protein 28	0.621	0.351	0.413	1.8e-58
UNIPROTKB|F1N5B8	932	F1N5B8 "Uncharacterized protei	0.658	0.304	0.433	2.5e-58
UNIPROTKB|F1MR52	997	F1MR52 "Uncharacterized protei	0.624	0.269	0.446	3e-58
ZFIN|ZDB-GENE-050208-649	456	si:ch211-222k6.1 "si:ch211-222	0.756	0.714	0.368	1.7e-57
UNIPROTKB|F1MVJ7	903	F1MVJ7 "Uncharacterized protei	0.721	0.344	0.403	3.2e-57

UNIPROTKB|F1N7M4 ZNF560 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 624 (224.7 bits), Expect = 5.5e-61, P = 5.5e-61
 Identities = 127/279 (45%), Positives = 158/279 (56%)

Query:   163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL 220
             H ++H G++ YKC  C K F+  S L  HM  H G K  KCD C K F+  S LT+HMK+
Sbjct:   406 HSQIHTGIKIYKCQECGKTFTGSSRLIEHMNTHTGEKPFKCDTCGKTFTQSSCLTKHMKI 465

Query:   221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 278
             H G K  KCD+C   F+  SYLT+HM+ H G K  KCD C K F+  SYL+ H + H G 
Sbjct:   466 HTGEKPLKCDICGTTFTQTSYLTQHMRTHTGEKPFKCDKCGKAFAAYSYLSNHFRTHTGE 525

Query:   279 KN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-K 335
             K  KCD C K F   S L++H K H G K  KCD C K FS+ SYL+ HM+ H G K  K
Sbjct:   526 KPFKCDTCGKTFVQSSGLSQHKKTHTGEKPFKCDTCGKTFSQSSYLSRHMRTHTGEKPYK 585

Query:   336 CDLCSKEFSHKSNLTKHMNLHQGIRY-KCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
             CD C K F   S L +H+  H G +  KC+ C K F+    LT+H K H   K  KCD C
Sbjct:   586 CDTCGKGFGFSSILRRHLQSHTGEKTAKCEKCGKTFTRASGLTQHMKTHTGEKPYKCDKC 645

Query:   394 SKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
              K F+    LT+H + H G   +KC  C K F+  S LT
Sbjct:   646 GKAFADSSCLTKHFRTHTGEKPFKCDKCGKSFAVSSRLT 684

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q9HBT7 ZNF287 "Zinc finger protein 287" [Homo sapiens (taxid:9606)]

 Score = 585 (211.0 bits), Expect = 9.9e-60, Sum P(2) = 9.9e-60
 Identities = 124/320 (38%), Positives = 178/320 (55%)

Query:   134 CLEFFKSCPKV-KVKSDHERRSINYKCQE------------KHMKLHQGVR-YKCDLCSK 179
             C + F+  P + K +S H +   +Y+C+E             H ++H G + Y+C  C K
Sbjct:   366 CGKKFRKYPSLLKHQSTHAKEK-SYECEECGKEFRHISSLIAHQRMHTGEKPYECHQCGK 424

Query:   180 KFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFST 237
              FS +++LT H ++H G K  KCD C K+FS +++LT H + H G K  KC  C K FS 
Sbjct:   425 AFSQRAHLTIHQRIHTGEKPYKCDDCGKDFSQRAHLTIHQRTHTGEKPYKCLECGKTFSH 484

Query:   238 KSYLTEHMKLHQGIKNK-CDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYL 295
              S L  H ++H G K   C+ C K FS  ++L +H K+H G K  KC+ C K FS  +YL
Sbjct:   485 SSSLINHQRVHTGEKPYICNECGKTFSQSTHLLQHQKIHTGKKPYKCNECWKVFSQSTYL 544

Query:   296 TEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNK-CDLCSKEFSHKSNLTKHM 353
               H ++H G K  KC+ C K F+  S L +H   H G K+  C++C K FS  +NLT+H 
Sbjct:   545 IRHQRIHSGEKCYKCNECGKAFAHSSTLIQHQTTHTGEKSYICNICGKAFSQSANLTQHH 604

Query:   354 NLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQ 411
               H G + YKC +C K FS   HLT+H+++H   K  KC++C K +     LT+H ++H 
Sbjct:   605 RTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNICGKAYRQGANLTQHQRIHT 664

Query:   412 GIT-YKCGLCSKEFSCKSNL 430
             G   YKC  C K F   S+L
Sbjct:   665 GEKPYKCNECGKAFIYSSSL 684

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0042035 "regulation of cytokine biosynthetic process" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1MP77 F1MP77 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 611 (220.1 bits), Expect = 1.3e-59, P = 1.3e-59
 Identities = 126/292 (43%), Positives = 171/292 (58%)

Query:   151 ERRSINYKCQEKHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEF 208
             ++  IN     KH ++H G R YKC  C K F+  S LT H+K+H G K  KC  CSK F
Sbjct:   447 DKAFINSSSLTKHQQIHPGERPYKCTECGKAFNQNSILTTHLKIHTGRKPFKCTDCSKAF 506

Query:   209 SSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKS 266
             + +S+LT+H ++H G K  KC  C K F   S LTEH ++H G +  KC  CS  F   S
Sbjct:   507 NRRSHLTQHQRIHTGEKPYKCTECGKAFPYSSSLTEHQRIHTGERPYKCTECSVAFVCSS 566

Query:   267 YLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTE 324
             +LT H ++H G K  KC  C+K F ++S LT+H ++H G +  KC  C+K F R+S+LT+
Sbjct:   567 HLTYHQRIHTGEKPYKCKECNKAFLSRSLLTQHQRVHSGERPYKCKECNKAFIRRSHLTK 626

Query:   325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKL 382
             H ++H G +  KC  C+K FS  SNL  H  +H G R YKC  C K F  + HLT+H+ +
Sbjct:   627 HQRIHTGERPYKCKECNKSFSQYSNLAYHQRIHTGERPYKCKECKKTFIHRSHLTQHQGI 686

Query:   383 HQDIKN-KCDLCSKEFSSKRI-LTEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
             H   +  KC  C+K F  KR  LT+H ++H G   Y C  C K F+C S LT
Sbjct:   687 HTGERPYKCKDCNKAFIQKRSRLTKHQRIHTGEKPYSCVECGKAFTCNSTLT 738

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q96IR2 ZNF845 "Zinc finger protein 845" [Homo sapiens (taxid:9606)]

 Score = 614 (221.2 bits), Expect = 2.6e-59, P = 2.6e-59
 Identities = 134/289 (46%), Positives = 166/289 (57%)

Query:   153 RSINYKCQ-EKHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFS 209
             ++ NY     KH  +H G + YKCD+C K F+ K YL  H + H G K  KC+ C K FS
Sbjct:   222 KAFNYSSVLRKHQIIHLGAKQYKCDVCGKVFNQKRYLACHRRCHTGKKPYKCNDCGKTFS 281

Query:   210 SKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSY 267
              +  LT H +LH G K+ KC  C K FS  S L  H  +H G K+ KC+ C K FS  SY
Sbjct:   282 QELTLTCHHRLHTGEKHYKCSECGKTFSRNSALVIHKAIHTGEKSYKCNECGKTFSQTSY 341

Query:   268 LTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEH 325
             L  H +LH G K  KC+ C K FS KS L  H K+H G K  KC+ CS+ FSRKS LT H
Sbjct:   342 LVYHRRLHTGEKPYKCEECDKAFSFKSNLERHRKIHTGEKPYKCNECSRTFSRKSSLTRH 401

Query:   326 MKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
              +LH G K  KC+ C K FS  S+L  H  LH G + YKC+ C + FS+K +L  HR++H
Sbjct:   402 RRLHTGEKPYKCNDCGKTFSQMSSLVYHRRLHTGEKPYKCEECDEAFSFKSNLERHRRIH 461

Query:   384 QDIKN-KCDLCSKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNL 430
                K  KC+ C K FS    L  H +LH G   YKC  C + FS KSNL
Sbjct:   462 TGEKPYKCNDCGKTFSQTSSLVYHRRLHTGEKPYKCEECDEAFSFKSNL 510

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|E2RLZ7 ZNF287 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 580 (209.2 bits), Expect = 8.8e-59, Sum P(2) = 8.8e-59
 Identities = 124/320 (38%), Positives = 177/320 (55%)

Query:   134 CLEFFKSCPK-VKVKSDHERRSINYKCQE------------KHMKLHQGVR-YKCDLCSK 179
             C + F+  P  VK +S H +   +++C+E             H ++H G + Y+C  C K
Sbjct:   373 CGKKFRKNPSFVKHQSTHAKEK-SHECEECGKEFRHISSLIAHQRMHTGEKPYECHQCGK 431

Query:   180 KFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFST 237
              FS +++LT H ++H G K  KCD C K+FS +++LT H + H G K  KC  C K FS 
Sbjct:   432 AFSQRAHLTIHQRIHTGEKPYKCDDCGKDFSQRAHLTIHQRTHTGEKPYKCLECGKTFSH 491

Query:   238 KSYLTEHMKLHQGIKNK-CDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYL 295
              S L  H ++H G K   C+ C K FS  ++L +H K+H G K  KC+ C K FS  +YL
Sbjct:   492 SSSLINHQRVHTGEKPYICNECGKTFSQSTHLLQHQKIHTGKKPYKCNECWKVFSQSTYL 551

Query:   296 TEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNK-CDLCSKEFSHKSNLTKHM 353
               H ++H G K  KC+ C K F+  S L +H   H G K+  C +C K FS  +NLT+H 
Sbjct:   552 IRHQRIHSGEKCYKCNECGKAFAHSSTLIQHQTTHTGEKSYICKICGKAFSQSANLTQHH 611

Query:   354 NLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQ 411
               H G + YKC +C K FS   HLT+H+++H   K  KC++C K +     LT+H ++H 
Sbjct:   612 RTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNICGKAYRQGANLTQHQRIHT 671

Query:   412 GIT-YKCGLCSKEFSCKSNL 430
             G   YKC  C K F   S+L
Sbjct:   672 GEKPYKCNECGKAFIYSSSL 691

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

RGD|1308617 Zfp287 "zinc finger protein 287" [Rattus norvegicus (taxid:10116)]

 Score = 568 (205.0 bits), Expect = 1.8e-58, Sum P(2) = 1.8e-58
 Identities = 115/278 (41%), Positives = 160/278 (57%)

Query:   163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKL 220
             H ++H G + Y+C  C K FS +++LT H ++H G K  KC+ C K+FS +++LT H + 
Sbjct:   412 HQRMHTGEKPYECHQCGKAFSQRAHLTIHQRIHTGEKPYKCNDCGKDFSQRAHLTIHQRT 471

Query:   221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKNK-CDLCSKEFSTKSYLTEHMKLHQGI 278
             H G K  KC  CSK FS  S L  H ++H G K   C+ C K FS  ++L +H K+H G 
Sbjct:   472 HTGEKPYKCLECSKTFSHSSSLINHQRVHTGEKPYICNECGKTFSQSTHLLQHQKIHTGK 531

Query:   279 KN-KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNK- 335
             K  KC+ C K FS  +YL  H ++H G K  KC  C K F+  S L +H   H G K+  
Sbjct:   532 KPYKCNECWKVFSQSTYLIRHQRIHSGEKCYKCTECGKAFAHSSTLIQHQTTHTGEKSYI 591

Query:   336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
             C++C K FS  +NLT+H   H G + YKC +C K FS   HLT+H+++H   K  KC+ C
Sbjct:   592 CNVCGKAFSQSANLTQHHRTHTGEKPYKCSVCGKAFSQSVHLTQHQRIHNGEKPFKCNTC 651

Query:   394 SKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNL 430
              K +     LT+H ++H G   YKC  C K F   S+L
Sbjct:   652 GKAYRQGANLTQHQRVHTGEKPYKCHHCGKAFIYSSSL 689

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0016032 "viral reproduction" evidence=IEA

GO:0042035 "regulation of cytokine biosynthetic process" evidence=IEA;ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA;ISO

UNIPROTKB|F1N5B8 F1N5B8 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 604 (217.7 bits), Expect = 2.5e-58, P = 2.5e-58
 Identities = 128/295 (43%), Positives = 160/295 (54%)

Query:   147 KSDHERRSINYKCQE-KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDL 203
             K D   R+ + K +   H  +H G + YKCD C K F  KS+L +H  +H G K  KCD 
Sbjct:   439 KCDECGRAFHAKSKLLTHQTIHTGEKPYKCDECGKAFRLKSFLLSHQTVHTGEKPYKCDE 498

Query:   204 CSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKE 261
             C K F+  SY  +H K+H G K  KC +C K FS K+YL  H  +H G K  KCD C K 
Sbjct:   499 CGKAFADSSYFRKHQKIHTGQKLFKCHICDKVFSRKAYLAGHQSVHSGEKPYKCDECGKA 558

Query:   262 FSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRK 319
             F  KS L  H ++H G K  KC  C K F+ +S L  H K+H G K  KCD+C K F R 
Sbjct:   559 FLVKSILLSHQRVHTGEKPYKCGECGKAFTDRSQLRRHQKIHTGQKLFKCDICDKVFIRS 618

Query:   320 SYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLT 377
              +L  H ++H G K  KCD C K F  KS L  H  +H G + YKCD C K F+ + HL 
Sbjct:   619 EHLAGHQRVHSGEKPYKCDECGKAFRVKSILLIHQTVHTGEKPYKCDECGKAFTDRSHLR 678

Query:   378 EHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNL 430
              H+K+H   K  KCD+C K F   + L  H  +H G   YKC  C K F  KS L
Sbjct:   679 RHQKIHTGQKLFKCDICDKVFRRSKQLAGHQSVHSGEKPYKCDECGKAFRVKSTL 733

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MR52 F1MR52 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 605 (218.0 bits), Expect = 3.0e-58, P = 3.0e-58
 Identities = 125/280 (44%), Positives = 158/280 (56%)

Query:   162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMK 219
             +HM  H G + +KCD C K F+  S LT HMK+H G K  KCD+C   F+  SYLT+HM+
Sbjct:   210 EHMNTHTGEKPFKCDTCGK-FTQSSCLTKHMKIHTGEKPLKCDICGTTFTQTSYLTQHMR 268

Query:   220 LHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQG 277
              H G K  KCD C K F+  SYL+ H +   G K  KCD C K F   S L++H K H G
Sbjct:   269 THTGEKPFKCDKCGKAFAAYSYLSNHFRTPTGEKPFKCDTCGKTFVQSSGLSQHKKTHTG 328

Query:   278 IKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN- 334
              K  KCD C K FS  SYL+ HM+ H G K  KCD C K F    +L  H++ H G K  
Sbjct:   329 EKPFKCDTCGKTFSQSSYLSRHMRTHTGEKPYKCDTCGKGFGFSFFLRRHLQSHTGEKTA 388

Query:   335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDL 392
             KCD C K F+  S LT+HM  H G + YKCD C K F+    LT+H + H   K  KCD 
Sbjct:   389 KCDKCGKTFTRASGLTQHMKTHTGEKPYKCDKCGKAFADSSCLTKHFRTHTGEKPFKCDK 448

Query:   393 CSKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
             C K F+    LT+H + H G   ++C  C K F+   ++T
Sbjct:   449 CGKSFAVSSRLTKHFRTHTGEKPFECNTCGKTFTTSLSVT 488

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-050208-649 si:ch211-222k6.1 "si:ch211-222k6.1" [Danio rerio (taxid:7955)]

 Score = 591 (213.1 bits), Expect = 1.7e-57, P = 1.7e-57
 Identities = 126/342 (36%), Positives = 183/342 (53%)

Query:    96 IKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDCLEFFKSCPKVKVKSDHERRSI 155
             IKHE  +   + +++E    G+ +   +   +    +     F+S P+V        +S 
Sbjct:     9 IKHEDAEELID-LMEENGETGEQLEAVEKHQDTHGQKSTSLSFQSRPEVHFTCPQCGKS- 66

Query:   156 NYKCQEK---HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQ-GLKNKCDLCSKEFSS 210
              + C++    HMK H+G + Y+CD C K F+ K+ L  HMK+H   +   CD C K F  
Sbjct:    67 -FSCEQSLNLHMKFHRGTKPYECDQCDKIFTLKTNLNEHMKIHNVDMLYTCDQCGKSFLL 125

Query:   211 KSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYL 268
             K  L +H+K+H G K   CD C K F  K YLTEH+K+H G K + CD C K F+ K  L
Sbjct:   126 KERLNKHLKIHTGEKPFTCDQCGKNFLHKGYLTEHIKIHTGEKPHTCDQCGKRFAYKGNL 185

Query:   269 TEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHM 326
             T+HMK+H G +   CD C+K F  K  L EH+K+H G +   CD C K+F  K  L++HM
Sbjct:   186 TDHMKVHTGERPYACDQCAKRFKHKGNLIEHVKIHTGERPYSCDQCGKKFKLKHILSDHM 245

Query:   327 KLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH- 383
             ++H G K   C+ C + ++ K NL+ HM  H G++ + CD C K F   G    H + H 
Sbjct:   246 RIHTGEKPFTCEKCGRSYTRKRNLSDHMKSHTGVKLHTCDQCGKSFVKTGVFKVHLRTHS 305

Query:   384 QDIKNKCDLCSKEFSSKRILTEHMKLH-QGITYKCGLCSKEF 424
             ++    CD C K+F     L +H+K+H Q   Y C LC K F
Sbjct:   306 RERPFNCDQCGKDFLRADALKDHLKVHTQERPYVCSLCGKGF 347

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1MVJ7 F1MVJ7 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 593 (213.8 bits), Expect = 3.2e-57, P = 3.2e-57
 Identities = 129/320 (40%), Positives = 163/320 (50%)

Query:   120 NVEDNDLNDAVTRDCLEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSK 179
             N  +  +N++++   L+    C ++ V + +    IN     + +K H+   YKCD C K
Sbjct:   180 NEVERSVNNSLSFSPLQTIPPCAQISVSNIYGNDFINPSVVTQDLKAHREKSYKCDECGK 239

Query:   180 KFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFST 237
              F  KS L +H  +H G K  KCD C K F  KS L  H  +H G K  KCD C K F  
Sbjct:   240 AFRVKSTLLSHQTVHTGEKPYKCDECGKAFRLKSILLSHQTVHTGEKPYKCDECGKAFRL 299

Query:   238 KSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYL 295
             KS+L  H  +H G K  KCD C K F  KS L  H  +H G K  KC+ C K F+  S L
Sbjct:   300 KSFLLTHQTVHTGEKPYKCDECGKAFRAKSTLLSHQTIHTGEKPYKCNECGKVFTHSSNL 359

Query:   296 TEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHM 353
               H K+H G K  KC +C K FSR  +L  H  +H G K  KC+ C K F+  S    H 
Sbjct:   360 RRHQKIHTGQKLFKCHICDKVFSRSEHLAGHQSVHSGEKPYKCNECGKHFNQPSKFISHK 419

Query:   354 NLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQ 411
              LH G + YKCD C K+FS       H++LH   K  KCD C K+F  K IL  H  +H 
Sbjct:   420 RLHTGEKPYKCDECGKDFSQPSQFISHKRLHTGEKPYKCDECGKDFHVKSILLRHQTVHT 479

Query:   412 GIT-YKCGLCSKEFSCKSNL 430
             G   YKC  C K F  KS L
Sbjct:   480 GEKPYKCDECGKAFRVKSIL 499

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	431
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	5e-05

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 45.1 bits (106), Expect = 5e-05
 Identities = 42/208 (20%), Positives = 59/208 (28%), Gaps = 23/208 (11%)

Query: 152 RRSINYKCQEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHM--KLHQGLKNK-----CDLC 204
             S N             +  K   C+  FS  S LT H+    H G   K       LC
Sbjct: 272 SSSPNESDSSSE--KGFSLPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLC 329

Query: 205 SKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFST 264
            K FS    L  H+ LH  I             K  L         + N       +   
Sbjct: 330 GKLFSRNDALKRHILLHTSISPA----------KEKLLNSSSKFSPLLNNEPP---QSLQ 376

Query: 265 KSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTE 324
           +    ++ K  + + N C    K  S  S         +    K   CSK F+R   L  
Sbjct: 377 QYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIP 436

Query: 325 HMKLHQGIKNKCDLCSKEFSHKSNLTKH 352
           H K+H            +   +     +
Sbjct: 437 HKKIHT-NHAPLLCSILKSFRRDLDLSN 463

Length = 467

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	431
KOG2462|consensus	279		99.95
KOG2462|consensus	279		99.95
KOG3608|consensus	467		99.94
KOG1074|consensus	958		99.94
KOG3608|consensus	467		99.93
KOG1074|consensus	958		99.92
KOG3623|consensus	1007		99.88
KOG3623|consensus	1007		99.83
KOG3576|consensus	267		99.66
KOG3576|consensus	267		99.57
PLN03086	567	PRLI-interacting factor K; Provisional	99.38
PLN03086	567	PRLI-interacting factor K; Provisional	99.3
PHA02768	55	hypothetical protein; Provisional	99.09
PHA00733	128	hypothetical protein	99.05
PHA02768	55	hypothetical protein; Provisional	98.88
PHA00733	128	hypothetical protein	98.85
KOG3993|consensus	500		98.69
KOG3993|consensus	500		98.69
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.58
PHA00732	79	hypothetical protein	98.31
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.3
PHA00616	44	hypothetical protein	98.26
PHA00616	44	hypothetical protein	98.14
PHA00732	79	hypothetical protein	98.11
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.09
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.91
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.9
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.83
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.81
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.72
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.55
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.43
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.3
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.03
smart00355	26	ZnF_C2H2 zinc finger.	96.86
smart00355	26	ZnF_C2H2 zinc finger.	96.73
KOG2231|consensus	669		96.72
KOG2231|consensus	669		96.61
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.6
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.43
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.29
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.2
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.04
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.03
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.03
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.92
KOG2482|consensus	423		95.9
PRK04860	160	hypothetical protein; Provisional	95.8
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.76
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.12
PRK04860	160	hypothetical protein; Provisional	95.1
KOG2482|consensus	423		95.04
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.97
KOG1146|consensus	1406		94.74
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.33
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.93
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	93.03
KOG1146|consensus	1406		92.3
KOG2785|consensus	390		91.84
KOG2785|consensus	390		91.69
KOG4173|consensus	253		91.28
COG5048	467	FOG: Zn-finger [General function prediction only]	90.23
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.15
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	90.11
KOG2893|consensus	341		89.92
KOG2893|consensus	341		89.79
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	87.6
COG5048	467	FOG: Zn-finger [General function prediction only]	86.47
KOG2186|consensus	276		85.31
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	84.65
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	82.57
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	81.96
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	80.4

>KOG2462|consensus

Probab=99.95  E-value=5.5e-29  Score=216.10  Aligned_cols=131  Identities=32%  Similarity=0.661  Sum_probs=122.2

Q ss_pred             CCCCCCCCCcccCCHHHHHHHHHHhCCCC----CCCCchhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHHH
Q psy8466         278 IKNKCDLCSKEFSTKSYLTEHMKLHQGLK----NKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHM  353 (431)
Q Consensus       278 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~----~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H~  353 (431)
                      .+|+|+.||+.+.+.+.|.+|.++|....    +.|++||+.|.+...|+.|+++|+ ...+|.+|||.|.+.+-|+.|+
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~-l~c~C~iCGKaFSRPWLLQGHi  207 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT-LPCECGICGKAFSRPWLLQGHI  207 (279)
T ss_pred             CceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC-CCcccccccccccchHHhhccc
Confidence            46899999999999999999999996432    489999999999999999999998 3579999999999999999999


Q ss_pred             hhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHh
Q psy8466         354 NLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       354 ~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~  409 (431)
                      |+|+|+ ||.|+.|+++|+.+++|+.|+++|.+.+ |+|..|+|.|..++.|.+|.-.
T Consensus       208 RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  208 RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            999997 9999999999999999999999999988 9999999999999999999754

>KOG2462|consensus

Probab=99.95  E-value=1.8e-28  Score=212.96  Aligned_cols=129  Identities=35%  Similarity=0.723  Sum_probs=115.5

Q ss_pred             CCCCCcCCcccCChhHHHHHHhHhcCCC----CCCCCCCcccCCHHHHHHHHHHhCCCCCCCCchhhccCChhHHHHHHH
Q psy8466         252 KNKCDLCSKEFSTKSYLTEHMKLHQGIK----NKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMK  327 (431)
Q Consensus       252 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~----~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  327 (431)
                      +++|+.||+.+.+.++|.+|..+|....    +.|+.||+.|.+...|+.|+++|+ ...+|.+|||.|...+.|+.|+|
T Consensus       130 r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~-l~c~C~iCGKaFSRPWLLQGHiR  208 (279)
T KOG2462|consen  130 RYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT-LPCECGICGKAFSRPWLLQGHIR  208 (279)
T ss_pred             ceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC-CCcccccccccccchHHhhcccc
Confidence            4589999999999999999999886432    789999999999999999999998 35689999999999999999999


Q ss_pred             HhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHH
Q psy8466         328 LHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       328 ~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      +|+|++ |.|+.|+++|..+++|+.||++|.+. +|+|..|+|+|+..+.|.+|..
T Consensus       209 THTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  209 THTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             cccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            999999 79999999999999999999999885 8999999999999999999965

>KOG3608|consensus

Probab=99.94  E-value=3e-27  Score=209.93  Aligned_cols=210  Identities=29%  Similarity=0.537  Sum_probs=145.6

Q ss_pred             cccccccCCHHHHHHHHHHhcCC--------------CCcc--CccCcccCCHhHHHHHHHHhcCCCC-CCCcCCcccCC
Q psy8466         202 DLCSKEFSSKSYLTEHMKLHQGI--------------KNKC--DLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFST  264 (431)
Q Consensus       202 ~~C~~~f~~~~~L~~H~~~h~~~--------------~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~  264 (431)
                      ..|+..|.+...|..|+..|.-.              .+.|  ..|.+.|.++..|+.|++.|++++. .|+.||..|.+
T Consensus       140 edCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~  219 (467)
T KOG3608|consen  140 EDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRT  219 (467)
T ss_pred             hhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhcc
Confidence            45777777777777777665321              0223  3477777777777777777777766 77777777777


Q ss_pred             hhHHHHHHhHhcC---CCCCCCCCCcccCCHHHHHHHHHHhCCCCCCCCchhhccCChhHHHHHHHH-hcCCC-Cccccc
Q psy8466         265 KSYLTEHMKLHQG---IKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKL-HQGIK-NKCDLC  339 (431)
Q Consensus       265 ~~~l~~H~~~h~~---~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~-h~~~~-~~C~~C  339 (431)
                      +..|..|++..+.   ..|+|..|.+.|.+...|..|+..|-. -++|+.|+......+.|..|++. |...+ ++|+.|
T Consensus       220 ~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn-~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~C  298 (467)
T KOG3608|consen  220 KTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN-CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDEC  298 (467)
T ss_pred             ccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh-cccccccccCCCChHHHHHHHHhhhccCCCccccch
Confidence            7777777765543   236777777777777777777776653 46777777777777777777764 44444 577777


Q ss_pred             hhccCCchHHHHHHhhhCCCcccccc--cccccCCHHHHHHHHHHhC-CC---CCcccccccccCChHHHHHHHHhcCC
Q psy8466         340 SKEFSHKSNLTKHMNLHQGIRYKCDL--CSKEFSWKGHLTEHRKLHQ-DI---KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       340 ~k~f~~~~~L~~H~~~h~~~~~~C~~--C~~~f~~~~~L~~H~~~H~-~~---~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ++.|.+.+.|.+|..+|...-|.|..  |..+|.+...|++|++.++ |.   +|.|..|++.|++-.+|..|++..||
T Consensus       299 d~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~  377 (467)
T KOG3608|consen  299 DTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLMKKHG  377 (467)
T ss_pred             hhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHHHhhc
Confidence            77777777777777777755677776  7777777777777776443 32   27777777777777777777766665

>KOG1074|consensus

Probab=99.94  E-value=4.4e-28  Score=237.06  Aligned_cols=50  Identities=32%  Similarity=0.614  Sum_probs=46.4

Q ss_pred             ccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         363 CDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       363 C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |..||+.|...+.|..|+|+|++.| |.|.+|++.|..+.+|+.||.+|.+
T Consensus       882 C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvHMgtH~w  932 (958)
T KOG1074|consen  882 CNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVHMGTHMW  932 (958)
T ss_pred             hccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhhhccccc
Confidence            9999999999999999999999888 8999999999999999999999987

>KOG3608|consensus

Probab=99.93  E-value=3.8e-26  Score=202.93  Aligned_cols=201  Identities=27%  Similarity=0.553  Sum_probs=138.0

Q ss_pred             CccCcccCCHhHHHHHHHHhcC------------CCC--CCC--cCCcccCChhHHHHHHhHhcCCC-CCCCCCCcccCC
Q psy8466         229 DLCSKEFSTKSYLTEHMKLHQG------------IKN--KCD--LCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFST  291 (431)
Q Consensus       229 ~~C~~~f~~~~~L~~H~~~h~~------------~~~--~C~--~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~  291 (431)
                      ..|+..|.+...|.+|+-.|..            +++  .|.  .|.+.|.+++.|+.|++.|++++ ..|+.||..|.+
T Consensus       140 edCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~  219 (467)
T KOG3608|consen  140 EDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRT  219 (467)
T ss_pred             hhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhcc
Confidence            3477777777777777766531            112  343  37777777777777777777776 467777777777


Q ss_pred             HHHHHHHHHHhCC---CCCCCCchhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHHHhhhCC--Cccccccc
Q psy8466         292 KSYLTEHMKLHQG---LKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQG--IRYKCDLC  366 (431)
Q Consensus       292 ~~~L~~H~~~h~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~h~~--~~~~C~~C  366 (431)
                      +..|..|++..+.   ..+.|..|.+.|.+...|..|+..|-. -|+|+.|+.+....++|..|++.-+.  +||+|+.|
T Consensus       220 ~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn-~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~C  298 (467)
T KOG3608|consen  220 KTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN-CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDEC  298 (467)
T ss_pred             ccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh-cccccccccCCCChHHHHHHHHhhhccCCCccccch
Confidence            7777777765432   234777777777777777777766653 37777777777777777777776443  36777777


Q ss_pred             ccccCCHHHHHHHHHHhCCCCCcccc--cccccCChHHHHHHHHhcC-C---CCCccCccccccCCCCCC
Q psy8466         367 SKEFSWKGHLTEHRKLHQDIKNKCDL--CSKEFSSKRILTEHMKLHQ-G---ITYKCGLCSKEFSCKSNL  430 (431)
Q Consensus       367 ~~~f~~~~~L~~H~~~H~~~~~~C~~--C~~~F~~~~~L~~H~~~H~-g---~~~~C~~C~~~f~~~~~l  430 (431)
                      ++.|.+.+.|.+|..+|.+.-|+|..  |..+|++...|++|++.++ |   .+|.|..|++.|++-.+|
T Consensus       299 d~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L  368 (467)
T KOG3608|consen  299 DTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSL  368 (467)
T ss_pred             hhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhH
Confidence            77777777777777777755577776  7777777777777777655 4   457777777777766554

>KOG1074|consensus

Probab=99.92  E-value=8.4e-27  Score=228.13  Aligned_cols=54  Identities=33%  Similarity=0.735  Sum_probs=49.2

Q ss_pred             cccccccccccCChHHHHHHHHHhcCCC-CcccccccccCCHHHHHHHHHHhcCC
Q psy8466         171 RYKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGI  224 (431)
Q Consensus       171 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~  224 (431)
                      +++|.+|.++|.+.+.|+.|+|.|+|++ |+|.+||..|.++.+|+.|...|+..
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~  407 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREK  407 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeecccc
Confidence            5789999999999999999999999987 89999999999999999998887653

>KOG3623|consensus

Probab=99.88  E-value=4.1e-23  Score=199.03  Aligned_cols=69  Identities=38%  Similarity=0.787  Sum_probs=56.2

Q ss_pred             ccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCccccccCCCCC
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSN  429 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C~~~f~~~~~  429 (431)
                      |.|+.|+|.|...++|.+|.-.|+|.+ |+|.+|.|+|+.+-.|..|+|.|.| +||+|..|+|.|+..+.
T Consensus       895 yaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGS  965 (1007)
T KOG3623|consen  895 YACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGS  965 (1007)
T ss_pred             chHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccc
Confidence            668888888888888888888888877 7888888888888888888888888 78888888888877653

>KOG3623|consensus

Probab=99.83  E-value=2.2e-21  Score=187.28  Aligned_cols=103  Identities=32%  Similarity=0.574  Sum_probs=85.3

Q ss_pred             ccccccccccccChhHHHhhhhhcCCc---cccccccccccCChHHHHHHHHHhcC--------------CCCccccccc
Q psy8466         144 VKVKSDHERRSINYKCQEKHMKLHQGV---RYKCDLCSKKFSTKSYLTAHMKLHQG--------------LKNKCDLCSK  206 (431)
Q Consensus       144 ~~~~~~~~~~~~~~~~~~~h~~~~~~~---~~~C~~C~~~f~~~~~L~~H~~~h~~--------------~~~~C~~C~~  206 (431)
                      +..|..|.+.+.+...++.|++....+   .|.|..|..+|..+..|.+||.+|..              .+|+|..|++
T Consensus       210 lltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgK  289 (1007)
T KOG3623|consen  210 LLTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGK  289 (1007)
T ss_pred             hhcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccch
Confidence            345777888888888888887765443   58899999999999999999988743              2489999999


Q ss_pred             ccCCHHHHHHHHHHhcCCC-CccCccCcccCCHhHHHHHHH
Q psy8466         207 EFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMK  246 (431)
Q Consensus       207 ~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~  246 (431)
                      .|..+..|+.|+|+|.|++ |.|+.|+|+|.....+..||.
T Consensus       290 AFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  290 AFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            9999999999999999977 799999999998888888873

>KOG3576|consensus

Probab=99.66  E-value=2.9e-17  Score=135.75  Aligned_cols=105  Identities=32%  Similarity=0.689  Sum_probs=67.7

Q ss_pred             CCCchhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCC
Q psy8466         308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       308 ~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      .|.+|++.|.....|.+|++-|...+ +.|..||+.|.....|++|+|+|+|. ||+|..|+++|++.-+|..|++.-+|
T Consensus       119 tCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvhg  198 (267)
T KOG3576|consen  119 TCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVHG  198 (267)
T ss_pred             eeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHcC
Confidence            45555555555555555555555444 55777777777777777777777775 67777777777777777777653222


Q ss_pred             -----------CC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         386 -----------IK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       386 -----------~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                                 .+ |.|..||..-.....+..|++.|+.
T Consensus       199 v~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  199 VQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             chHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence                       12 5677777777777777777777764

>KOG3576|consensus

Probab=99.57  E-value=7.9e-16  Score=127.34  Aligned_cols=118  Identities=29%  Similarity=0.629  Sum_probs=70.1

Q ss_pred             CCCCcCCcccCChhHHHHHHhHhcCCC-CCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCchhhccCChhHHHHHHHHhc
Q psy8466         253 NKCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQ  330 (431)
Q Consensus       253 ~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~  330 (431)
                      +.|.+|++.|.-...|++|++-|...+ +.|..||+.|....+|++|+++|+|.++ +|..|+++|..+-.|..|++.-+
T Consensus       118 ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvh  197 (267)
T KOG3576|consen  118 FTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVH  197 (267)
T ss_pred             eeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHc
Confidence            467777777777777777777776544 5666666666666666666666666653 66666666666666666665444


Q ss_pred             CCCCccccchhccCCchHHHHHHhhhCCCcccccccccccCCHHHHHHHHHHhCC
Q psy8466         331 GIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       331 ~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      |....       |    .+    +.-..+-|.|..||.+-.....+..|++.|+.
T Consensus       198 gv~~~-------y----ay----kerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  198 GVQHQ-------Y----AY----KERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             CchHH-------H----HH----HHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            42100       0    00    00001136666676666666666666665543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.38  E-value=5.4e-13  Score=131.01  Aligned_cols=141  Identities=18%  Similarity=0.405  Sum_probs=64.7

Q ss_pred             CCCcCCcccCChhHHHHHHhHhcCCCCCCCC--CCcccCCHHHHHHHHHHhCCCCCCCCchhhccCChhHHHHHHHHhcC
Q psy8466         254 KCDLCSKEFSTKSYLTEHMKLHQGIKNKCDL--CSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQG  331 (431)
Q Consensus       254 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  331 (431)
                      .|+.|..... ...|..|........-.|+.  ||..|. +..|..|+        .|+.|++.|. ...|..|+++|+ 
T Consensus       409 ~C~NC~~~i~-l~~l~lHe~~C~r~~V~Cp~~~Cg~v~~-r~el~~H~--------~C~~Cgk~f~-~s~LekH~~~~H-  476 (567)
T PLN03086        409 ECRNCKHYIP-SRSIALHEAYCSRHNVVCPHDGCGIVLR-VEEAKNHV--------HCEKCGQAFQ-QGEMEKHMKVFH-  476 (567)
T ss_pred             ECCCCCCccc-hhHHHHHHhhCCCcceeCCcccccceee-ccccccCc--------cCCCCCCccc-hHHHHHHHHhcC-
Confidence            4555555443 33444555333222234542  555552 22223331        4555555553 344555555543 


Q ss_pred             CCCccccchhccCCchHHHHHHhhhCCC-cccccccccccC----------CHHHHHHHHHHhCCCCCcccccccccCCh
Q psy8466         332 IKNKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFS----------WKGHLTEHRKLHQDIKNKCDLCSKEFSSK  400 (431)
Q Consensus       332 ~~~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~----------~~~~L~~H~~~H~~~~~~C~~C~~~F~~~  400 (431)
                      ..+.|+ ||+.+ .+..|..|+++|.+. ++.|..|++.|.          ....|..|..++....+.|..||+.|..+
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr  554 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLK  554 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeeh
Confidence            234555 55433 335555555555443 455555555553          12345555555433335555555555432


Q ss_pred             HHHHHHHHh
Q psy8466         401 RILTEHMKL  409 (431)
Q Consensus       401 ~~L~~H~~~  409 (431)
                       .|..|+..
T Consensus       555 -dm~~H~~~  562 (567)
T PLN03086        555 -EMDIHQIA  562 (567)
T ss_pred             -hHHHHHHH
Confidence             34444433

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.30  E-value=5.4e-12  Score=124.02  Aligned_cols=133  Identities=19%  Similarity=0.446  Sum_probs=81.7

Q ss_pred             CCCCCCcccCCHHHHHHHHHHhCCCCCCCCc--hhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHHHhhhCC
Q psy8466         281 KCDLCSKEFSTKSYLTEHMKLHQGLKNKCDL--CSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQG  358 (431)
Q Consensus       281 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~h~~  358 (431)
                      .|+.|.+..... .|..|...-.-..-.|+.  ||..|. +..+..|        +.|+.|++.|. ...|..|+++|+ 
T Consensus       409 ~C~NC~~~i~l~-~l~lHe~~C~r~~V~Cp~~~Cg~v~~-r~el~~H--------~~C~~Cgk~f~-~s~LekH~~~~H-  476 (567)
T PLN03086        409 ECRNCKHYIPSR-SIALHEAYCSRHNVVCPHDGCGIVLR-VEEAKNH--------VHCEKCGQAFQ-QGEMEKHMKVFH-  476 (567)
T ss_pred             ECCCCCCccchh-HHHHHHhhCCCcceeCCcccccceee-ccccccC--------ccCCCCCCccc-hHHHHHHHHhcC-
Confidence            577776655433 444665433322236663  777663 3333443        26777777774 566777777765 


Q ss_pred             CcccccccccccCCHHHHHHHHHHhCCCC-CcccccccccC----------ChHHHHHHHHhcCCCCCccCccccccCCC
Q psy8466         359 IRYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFS----------SKRILTEHMKLHQGITYKCGLCSKEFSCK  427 (431)
Q Consensus       359 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~----------~~~~L~~H~~~H~g~~~~C~~C~~~f~~~  427 (431)
                      .+|.|+ ||+.+ .+..|..|+++|...+ +.|.+|++.|.          ..+.|..|+.++.++++.|..||+.|..+
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr  554 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLK  554 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeeh
Confidence            567777 77544 5577777777776666 67777777774          23467777777644777777777776543

>PHA02768 hypothetical protein; Provisional

Probab=99.09  E-value=6.5e-11  Score=77.94  Aligned_cols=42  Identities=14%  Similarity=0.429  Sum_probs=31.5

Q ss_pred             CcccccccccCChHHHHHHHHhcCCCCCccCccccccCCCCCC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFSCKSNL  430 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g~~~~C~~C~~~f~~~~~l  430 (431)
                      |.|+.||+.|...+.|..||++|+ +||+|..|++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceeccccee
Confidence            677777777777777777777777 577777777777777665

>PHA00733 hypothetical protein

Probab=99.05  E-value=2e-10  Score=92.38  Aligned_cols=79  Identities=22%  Similarity=0.330  Sum_probs=61.8

Q ss_pred             CccccchhccCCchHHH------HHHhhhCCCcccccccccccCCHHHHHHHHHHhCCCCCcccccccccCChHHHHHHH
Q psy8466         334 NKCDLCSKEFSHKSNLT------KHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHM  407 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~------~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~F~~~~~L~~H~  407 (431)
                      +.|.+|.+.|..+..|.      +|+..+...||.|+.||+.|.+...|..|++.| ..+|.|..|++.|.....|..|+
T Consensus        41 ~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~F~~~~sL~~H~  119 (128)
T PHA00733         41 LIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKEFRNTDSTLDHV  119 (128)
T ss_pred             HHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCccCCHHHHHHHH
Confidence            46777776666555444      444455556899999999999999999999876 33589999999999999999999


Q ss_pred             HhcCCC
Q psy8466         408 KLHQGI  413 (431)
Q Consensus       408 ~~H~g~  413 (431)
                      ...|+.
T Consensus       120 ~~~h~~  125 (128)
T PHA00733        120 CKKHNI  125 (128)
T ss_pred             HHhcCc
Confidence            988873

>PHA02768 hypothetical protein; Provisional

Probab=98.88  E-value=8.8e-10  Score=72.64  Aligned_cols=42  Identities=17%  Similarity=0.372  Sum_probs=25.2

Q ss_pred             ccccccccccCCHHHHHHHHHHhCCCCCcccccccccCChHHH
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRIL  403 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~F~~~~~L  403 (431)
                      |.|+.||+.|+..+.|..|+++|+ .+|+|..|++.|.+.+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceeccccee
Confidence            556666666666666666666665 345666666666655544

>PHA00733 hypothetical protein

Probab=98.85  E-value=1.9e-09  Score=86.75  Aligned_cols=77  Identities=19%  Similarity=0.295  Sum_probs=53.6

Q ss_pred             CCCchhhccCChhHHHH------HHHHhcCCCCccccchhccCCchHHHHHHhhhCCCcccccccccccCCHHHHHHHHH
Q psy8466         308 KCDLCSKEFSRKSYLTE------HMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       308 ~C~~C~~~f~~~~~l~~------H~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      .|.+|.+.|.....|..      |+..+....|.|+.|++.|.+...|..|++.| ..+|.|+.|++.|.....|..|++
T Consensus        42 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~F~~~~sL~~H~~  120 (128)
T PHA00733         42 IRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKEFRNTDSTLDHVC  120 (128)
T ss_pred             HHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCccCCHHHHHHHHH
Confidence            45555555555444443      33334434478888888888888888888876 346888888888888888888887


Q ss_pred             HhCC
Q psy8466         382 LHQD  385 (431)
Q Consensus       382 ~H~~  385 (431)
                      ..++
T Consensus       121 ~~h~  124 (128)
T PHA00733        121 KKHN  124 (128)
T ss_pred             HhcC
Confidence            6654

>KOG3993|consensus

Probab=98.69  E-value=1.9e-09  Score=99.55  Aligned_cols=186  Identities=20%  Similarity=0.301  Sum_probs=112.5

Q ss_pred             cccccccccccCChHHHHHHHH--HhcCCCCcccccccccCCHHHHHHHHHHhcCCCCcc----CccCcccCCHhHHHHH
Q psy8466         171 RYKCDLCSKKFSTKSYLTAHMK--LHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKC----DLCSKEFSTKSYLTEH  244 (431)
Q Consensus       171 ~~~C~~C~~~f~~~~~L~~H~~--~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C----~~C~~~f~~~~~L~~H  244 (431)
                      -|.|..|...|.....|.+|.-  +-+ ..|+|+.|+|.|+...+|..|.|.|....-.-    +-=.+...+....+.-
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~-vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVH-VEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEE-eeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            5999999999999999999963  222 24999999999999999999999986432100    0000000000000000


Q ss_pred             HHH---hcCCCCCCCcCCcccCChhHHHHHHhHhcCCC------------------CCCCCCCcccCCHHHHHHHHHHhC
Q psy8466         245 MKL---HQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIK------------------NKCDLCSKEFSTKSYLTEHMKLHQ  303 (431)
Q Consensus       245 ~~~---h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~------------------~~C~~C~~~f~~~~~L~~H~~~h~  303 (431)
                      .+.   -...-+.|.+|++.|.....|+.|+.+|+...                  +-|..|+-.+.....-..+...+.
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a  425 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVA  425 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeee
Confidence            000   00112367777777777777777776665321                  135555544444333223322222


Q ss_pred             C--CCCCCCchhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhC
Q psy8466         304 G--LKNKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQ  357 (431)
Q Consensus       304 ~--~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~  357 (431)
                      +  +...|+.|+..+.++..--.+.+.-.... |.|.+|...|.+...|.+|+...|
T Consensus       426 ~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~H  482 (500)
T KOG3993|consen  426 GSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCH  482 (500)
T ss_pred             ccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcC
Confidence            2  22367888877776655444444333223 789999999999999999987644

>KOG3993|consensus

Probab=98.69  E-value=1.3e-09  Score=100.54  Aligned_cols=184  Identities=18%  Similarity=0.258  Sum_probs=119.6

Q ss_pred             CcccccccccCCHHHHHHHHHHhc-CCCCccCccCcccCCHhHHHHHHHHhcCCCCCC----CcCCcccCChhHHHHHHh
Q psy8466         199 NKCDLCSKEFSSKSYLTEHMKLHQ-GIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKC----DLCSKEFSTKSYLTEHMK  273 (431)
Q Consensus       199 ~~C~~C~~~f~~~~~L~~H~~~h~-~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C----~~C~~~f~~~~~l~~H~~  273 (431)
                      |.|..|...|.+...|.+|.-.-. ...|+|+.|+|.|....+|..|.|+|....-.-    +-=.+...+....+.-.+
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            789999999999999999964322 134899999999999999999999996432200    000001111111111111


Q ss_pred             H---hcCCCCCCCCCCcccCCHHHHHHHHHHhCCCC------------------CCCCchhhccCChhHHHHHHHHhcCC
Q psy8466         274 L---HQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLK------------------NKCDLCSKEFSRKSYLTEHMKLHQGI  332 (431)
Q Consensus       274 ~---h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~------------------~~C~~C~~~f~~~~~l~~H~~~h~~~  332 (431)
                      .   -...-|.|..|++.|+.+..|+.|+.+|+...                  +.|..|+-.+.....--.+...+.+.
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~s  427 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGS  427 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeecc
Confidence            0   11123899999999999999999988876321                  13555555444433222222222221


Q ss_pred             --CCccccchhccCCchHHHHHHhhhCC-CcccccccccccCCHHHHHHHHHH
Q psy8466         333 --KNKCDLCSKEFSHKSNLTKHMNLHQG-IRYKCDLCSKEFSWKGHLTEHRKL  382 (431)
Q Consensus       333 --~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~  382 (431)
                        ...|++|+..+.++..-..|.+.-.. .-|.|.+|...|.+...|.+|+..
T Consensus       428 ael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  428 AELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             ccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhh
Confidence              24788999888777665555543222 259999999999999999999764

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.58  E-value=3.1e-08  Score=55.77  Aligned_cols=25  Identities=48%  Similarity=0.897  Sum_probs=19.6

Q ss_pred             HHHHHHHhcCC-CCCccCccccccCC
Q psy8466         402 ILTEHMKLHQG-ITYKCGLCSKEFSC  426 (431)
Q Consensus       402 ~L~~H~~~H~g-~~~~C~~C~~~f~~  426 (431)
                      +|..||++|+| +||.|++|++.|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            47788888888 78888888888863

...

>PHA00732 hypothetical protein

Probab=98.31  E-value=4.1e-07  Score=66.20  Aligned_cols=48  Identities=25%  Similarity=0.497  Sum_probs=26.3

Q ss_pred             cccccccccccCCHHHHHHHHHH-hCCCCCcccccccccCChHHHHHHHHhcCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKL-HQDIKNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~-H~~~~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ||.|+.||+.|.+...|..|++. |.+  +.|+.||+.|.   .|..|++++..
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~--~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL--TKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC--CccCCCCCEeC---ChhhhhcccCC
Confidence            35566666666666666666553 432  35666666665   35555554443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.30  E-value=4.1e-07  Score=51.15  Aligned_cols=23  Identities=52%  Similarity=1.029  Sum_probs=11.4

Q ss_pred             HHHHHhhhCCC-cccccccccccC
Q psy8466         349 LTKHMNLHQGI-RYKCDLCSKEFS  371 (431)
Q Consensus       349 L~~H~~~h~~~-~~~C~~C~~~f~  371 (431)
                      |.+|+++|+|+ ||.|+.|+++|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            44555555544 455555555543

...

>PHA00616 hypothetical protein

Probab=98.26  E-value=4.4e-07  Score=56.92  Aligned_cols=37  Identities=19%  Similarity=0.233  Sum_probs=24.9

Q ss_pred             CcccccccccCChHHHHHHHHhcCC-CCCccCcccccc
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEF  424 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C~~~f  424 (431)
                      |+|+.||+.|..++.|..|++.||| .|+.|++=--.|
T Consensus         2 YqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~f   39 (44)
T PHA00616          2 YQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIYF   39 (44)
T ss_pred             CccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEEE
Confidence            6677777777777777777777777 666665543333

>PHA00616 hypothetical protein

Probab=98.14  E-value=1.3e-06  Score=54.89  Aligned_cols=32  Identities=22%  Similarity=0.294  Sum_probs=21.3

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      ||+|+.||+.|..++.|..|++.|+|.+ +.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            4667777777777777777777666655 5554

>PHA00732 hypothetical protein

Probab=98.11  E-value=1.7e-06  Score=62.95  Aligned_cols=47  Identities=28%  Similarity=0.501  Sum_probs=30.0

Q ss_pred             CccccchhccCCchHHHHHHhh-hCCCcccccccccccCCHHHHHHHHHHhCC
Q psy8466         334 NKCDLCSKEFSHKSNLTKHMNL-HQGIRYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      |.|+.|++.|.+...|..|++. |.  ++.|+.||+.|.   .|..|.+.+.+
T Consensus         2 y~C~~Cgk~F~s~s~Lk~H~r~~H~--~~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          2 FKCPICGFTTVTLFALKQHARRNHT--LTKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             ccCCCCCCccCCHHHHHHHhhcccC--CCccCCCCCEeC---ChhhhhcccCC
Confidence            4567777777777777777663 44  356777777776   46666655544

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.09  E-value=4.8e-06  Score=56.24  Aligned_cols=49  Identities=24%  Similarity=0.487  Sum_probs=30.3

Q ss_pred             ccccccccccCCHHHHHHHHH-HhCCCC--CcccccccccCChHHHHHHHHhcCC
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRK-LHQDIK--NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~-~H~~~~--~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.|++|++ ..+...|..|.. .|.+.+  +.|++|...+.  ..|..||..+|+
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            66777777 444566777754 444332  67777776544  377777776654

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.91  E-value=1.7e-05  Score=53.61  Aligned_cols=49  Identities=22%  Similarity=0.426  Sum_probs=29.4

Q ss_pred             CCccccchhccCCchHHHHHHhhhC-CC--cccccccccccCCHHHHHHHHHHhC
Q psy8466         333 KNKCDLCSKEFSHKSNLTKHMNLHQ-GI--RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       333 ~~~C~~C~k~f~~~~~L~~H~~~h~-~~--~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      .|.||+|++ ..+...|..|....+ ..  .+.|++|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            356777777 344566777765533 22  467777776544  37777766544

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.90  E-value=5.9e-06  Score=63.98  Aligned_cols=72  Identities=26%  Similarity=0.467  Sum_probs=13.9

Q ss_pred             cccchhccCCchHHHHHHhhhCCCcccccccccccCCHHHHHHHHHHhCCCCCcccccccccCChHHHHHHHHhc
Q psy8466         336 CDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLH  410 (431)
Q Consensus       336 C~~C~k~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~F~~~~~L~~H~~~H  410 (431)
                      |.+|+..|.+...|..|+...++....   ....+.....+..+.+.-....+.|.+|++.|.+...|..||+.+
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIP---DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             --------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccc---cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            555555555555555555544442111   111222333333343332233455666666666666666666553

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.83  E-value=9e-06  Score=44.32  Aligned_cols=21  Identities=52%  Similarity=0.936  Sum_probs=10.3

Q ss_pred             cccccccccCChHHHHHHHHh
Q psy8466         389 KCDLCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       389 ~C~~C~~~F~~~~~L~~H~~~  409 (431)
                      .|+.|++.|.++..|..|+++
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    2 KCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCccCCHHHHHHHHhH
Confidence            444455555555555555444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.81  E-value=1.3e-05  Score=43.70  Aligned_cols=23  Identities=48%  Similarity=0.954  Sum_probs=15.8

Q ss_pred             ccccccccccCCHHHHHHHHHHh
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~~H  383 (431)
                      |.|+.|++.|.++..|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777776654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.72  E-value=2e-05  Score=60.93  Aligned_cols=71  Identities=25%  Similarity=0.462  Sum_probs=14.2

Q ss_pred             CCchhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHHHhhhCCCcccccccccccCCHHHHHHHHHH
Q psy8466         309 CDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKL  382 (431)
Q Consensus       309 C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~  382 (431)
                      |..|+..|.+...|..|+...++....   ....+.....+..+++.-....+.|..|++.|.+...|..|++.
T Consensus         2 C~~C~~~f~~~~~l~~H~~~~H~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen    2 CLFCDESFSSVDDLLQHMKKKHGFDIP---DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             --------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHH
T ss_pred             ccccccccccccccccccccccccccc---cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcC
Confidence            555555555555555555544433211   11112233333344333222346666666666666666666664

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.55  E-value=4.6e-05  Score=41.81  Aligned_cols=22  Identities=45%  Similarity=0.952  Sum_probs=10.6

Q ss_pred             cccccccccCChHHHHHHHHhc
Q psy8466         389 KCDLCSKEFSSKRILTEHMKLH  410 (431)
Q Consensus       389 ~C~~C~~~F~~~~~L~~H~~~H  410 (431)
                      .|++|++.|.+...|..|+++|
T Consensus         2 ~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    2 QCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             E-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCcCCCCcCCcHHHHHHHHHhh
Confidence            4555555555555555555544

...

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.43  E-value=0.0001  Score=40.37  Aligned_cols=23  Identities=35%  Similarity=0.872  Sum_probs=13.9

Q ss_pred             ccccccccccCCHHHHHHHHHHh
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~~H  383 (431)
                      |.|++|++.|.+...|..|+++|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            45666666666666666666655

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.30  E-value=0.00013  Score=41.35  Aligned_cols=24  Identities=42%  Similarity=0.832  Sum_probs=13.7

Q ss_pred             cccccccccccCCHHHHHHHHHHh
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H  383 (431)
                      ||.|..|++.|.+...|..|++.|
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHh
Confidence            355555555555555555555554

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.03  E-value=0.00034  Score=39.65  Aligned_cols=25  Identities=40%  Similarity=0.736  Sum_probs=18.6

Q ss_pred             cccccccccccCChHHHHHHHHHhc
Q psy8466         171 RYKCDLCSKKFSTKSYLTAHMKLHQ  195 (431)
Q Consensus       171 ~~~C~~C~~~f~~~~~L~~H~~~h~  195 (431)
                      ||.|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4677777777777777777777664

>smart00355 ZnF_C2H2 zinc finger

Probab=96.86  E-value=0.00098  Score=37.00  Aligned_cols=22  Identities=50%  Similarity=0.921  Sum_probs=12.6

Q ss_pred             cccccccccCChHHHHHHHHhc
Q psy8466         389 KCDLCSKEFSSKRILTEHMKLH  410 (431)
Q Consensus       389 ~C~~C~~~F~~~~~L~~H~~~H  410 (431)
                      .|..|++.|.....|..|++.|
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~H   23 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRTH   23 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHHh
Confidence            4555555555555555555544

>smart00355 ZnF_C2H2 zinc finger

Probab=96.73  E-value=0.0013  Score=36.55  Aligned_cols=24  Identities=42%  Similarity=0.801  Sum_probs=19.6

Q ss_pred             ccccccccccCCHHHHHHHHHHhC
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      |.|+.|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            578888888888888888888764

>KOG2231|consensus

Probab=96.72  E-value=0.0032  Score=63.75  Aligned_cols=39  Identities=28%  Similarity=0.682  Sum_probs=22.3

Q ss_pred             CccCccCcccCCHhHHHHHHHHhcCCCCCCCcCCcccCChhHHHHHHhHhc
Q psy8466         226 NKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQ  276 (431)
Q Consensus       226 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~  276 (431)
                      +.|.+|+..|.-..           .+..|..| ..|.+...|+.|+..-|
T Consensus       100 ~~C~~C~~~~~~~~-----------~~~~~~~c-~~~~s~~~Lk~H~~~~H  138 (669)
T KOG2231|consen  100 HSCHICDRRFRALY-----------NKKECLHC-TEFKSVENLKNHMRDQH  138 (669)
T ss_pred             hhcCccccchhhhc-----------ccCCCccc-cchhHHHHHHHHHHHhh
Confidence            45777776653211           11256667 66667777777775433

>KOG2231|consensus

Probab=96.61  E-value=0.0046  Score=62.63  Aligned_cols=47  Identities=30%  Similarity=0.770  Sum_probs=31.6

Q ss_pred             CcccccccccCCHHHHHHHHHHhcCCCCccCccCcccCCHhHHHHHHHHhcCCCCCCCcC
Q psy8466         199 NKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLC  258 (431)
Q Consensus       199 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C  258 (431)
                      +.|.+|+..|.-..           ..-.|..| -.|.+...|+.|+..-|.. ..|..|
T Consensus       100 ~~C~~C~~~~~~~~-----------~~~~~~~c-~~~~s~~~Lk~H~~~~H~~-~~c~lC  146 (669)
T KOG2231|consen  100 HSCHICDRRFRALY-----------NKKECLHC-TEFKSVENLKNHMRDQHKL-HLCSLC  146 (669)
T ss_pred             hhcCccccchhhhc-----------ccCCCccc-cchhHHHHHHHHHHHhhhh-hccccc
Confidence            68999988875321           12468889 8888999999999654432 234444

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.60  E-value=0.00051  Score=61.83  Aligned_cols=50  Identities=32%  Similarity=0.630  Sum_probs=35.8

Q ss_pred             CCcccccc--cccccCCHHHHHHHHH-HhC-------------------CCCCcccccccccCChHHHHHHH
Q psy8466         358 GIRYKCDL--CSKEFSWKGHLTEHRK-LHQ-------------------DIKNKCDLCSKEFSSKRILTEHM  407 (431)
Q Consensus       358 ~~~~~C~~--C~~~f~~~~~L~~H~~-~H~-------------------~~~~~C~~C~~~F~~~~~L~~H~  407 (431)
                      ++||+|++  |.|.|.....|+-|+. -|.                   +++|+|.+|+|+++...-|+.|+
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            46788876  8888888888888865 341                   23477777777777777777664

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.43  E-value=0.0014  Score=35.86  Aligned_cols=23  Identities=43%  Similarity=0.641  Sum_probs=11.5

Q ss_pred             CcccccccccCChHHHHHHHHhcC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      |+|+.|+.... ...|..|+++|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            34555555555 555555555544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.29  E-value=0.0034  Score=40.42  Aligned_cols=25  Identities=16%  Similarity=0.433  Sum_probs=9.8

Q ss_pred             cccccccccccCCHHHHHHHHHHhC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      |-.|++|+..+.+..+|.+|+.+++
T Consensus        24 PatCP~C~a~~~~srnLrRHle~~H   48 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEIRH   48 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHHHT
T ss_pred             CCCCCcchhhccchhhHHHHHHHHh
Confidence            3444444444444444444444333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.20  E-value=0.0013  Score=59.29  Aligned_cols=50  Identities=30%  Similarity=0.653  Sum_probs=41.1

Q ss_pred             CCCcccc--chhccCCchHHHHHHhhhC--------------------CCcccccccccccCCHHHHHHHHH
Q psy8466         332 IKNKCDL--CSKEFSHKSNLTKHMNLHQ--------------------GIRYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       332 ~~~~C~~--C~k~f~~~~~L~~H~~~h~--------------------~~~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      ..|+|++  |.|.|.....|+.|+..-+                    .+||+|++|+|.|.....|+-|+.
T Consensus       348 KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         348 KPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             ceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            3478887  9999999999999986422                    247999999999999999999965

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.04  E-value=0.0026  Score=35.17  Aligned_cols=21  Identities=43%  Similarity=0.931  Sum_probs=11.6

Q ss_pred             cccccccccCChHHHHHHHHh
Q psy8466         389 KCDLCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       389 ~C~~C~~~F~~~~~L~~H~~~  409 (431)
                      .|.+|++.|.+...|..|++.
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCcCCHHHHHHHHCc
Confidence            455555555555555555543

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.03  E-value=0.0038  Score=34.50  Aligned_cols=22  Identities=36%  Similarity=0.833  Sum_probs=15.8

Q ss_pred             ccccccccccCCHHHHHHHHHH
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRKL  382 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~~  382 (431)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            5677777777777777777664

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.03  E-value=0.0031  Score=40.58  Aligned_cols=38  Identities=18%  Similarity=0.379  Sum_probs=23.1

Q ss_pred             HHHHHHhC--CCCCcccccccccCChHHHHHHHHhcCC-CC
Q psy8466         377 TEHRKLHQ--DIKNKCDLCSKEFSSKRILTEHMKLHQG-IT  414 (431)
Q Consensus       377 ~~H~~~H~--~~~~~C~~C~~~F~~~~~L~~H~~~H~g-~~  414 (431)
                      ..+.+.|.  ..+..|++|+..+.+..+|++|+.++|+ +|
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhcccC
Confidence            44554443  2236899999999999999999988887 54

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.92  E-value=0.0047  Score=33.75  Aligned_cols=23  Identities=48%  Similarity=0.768  Sum_probs=13.0

Q ss_pred             ccccccccccCCHHHHHHHHHHhC
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      |+|+.|+.... ...|..|+++|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45666666665 666666666543

>KOG2482|consensus

Probab=95.90  E-value=0.019  Score=52.54  Aligned_cols=145  Identities=25%  Similarity=0.365  Sum_probs=89.7

Q ss_pred             hHHHHHHhHhcCCCC--CCCCCCccc-CCHHHHHHHHHH-hC---C-------------------CCCCCCchhhccCCh
Q psy8466         266 SYLTEHMKLHQGIKN--KCDLCSKEF-STKSYLTEHMKL-HQ---G-------------------LKNKCDLCSKEFSRK  319 (431)
Q Consensus       266 ~~l~~H~~~h~~~~~--~C~~C~~~f-~~~~~L~~H~~~-h~---~-------------------~~~~C~~C~~~f~~~  319 (431)
                      ..|..|++.-.+..|  +|-.|...+ .+++.+..|+-. |.   |                   .+..|-.|.+.|+.+
T Consensus       129 eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrdk  208 (423)
T KOG2482|consen  129 EALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRDK  208 (423)
T ss_pred             HHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCCc
Confidence            345555554433333  899998655 567788888764 42   1                   123699999999999


Q ss_pred             hHHHHHHHH--hcCCCCccccchhccC--------CchHHHHHH--hhh---------------CC-Cc--ccccccccc
Q psy8466         320 SYLTEHMKL--HQGIKNKCDLCSKEFS--------HKSNLTKHM--NLH---------------QG-IR--YKCDLCSKE  369 (431)
Q Consensus       320 ~~l~~H~~~--h~~~~~~C~~C~k~f~--------~~~~L~~H~--~~h---------------~~-~~--~~C~~C~~~  369 (431)
                      ..|+.||+.  |-...++=..-++-|.        +......|.  .+-               .+ .+  .+|-.|...
T Consensus       209 ntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~  288 (423)
T KOG2482|consen  209 NTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNF  288 (423)
T ss_pred             HHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccc
Confidence            999999874  3322232222222110        111111111  110               01 12  589999999


Q ss_pred             cCCHHHHHHHHHHhCC----------------------------CCCcccccccccCChHHHHHHHHhc
Q psy8466         370 FSWKGHLTEHRKLHQD----------------------------IKNKCDLCSKEFSSKRILTEHMKLH  410 (431)
Q Consensus       370 f~~~~~L~~H~~~H~~----------------------------~~~~C~~C~~~F~~~~~L~~H~~~H  410 (431)
                      ..+...|..||++-+.                            .+-.|..|.-.|.....|..||..+
T Consensus       289 ~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  289 YENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             hhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcccc
Confidence            9999999999984321                            0125999999999999999999764

>PRK04860 hypothetical protein; Provisional

Probab=95.80  E-value=0.0045  Score=51.79  Aligned_cols=26  Identities=19%  Similarity=0.604  Sum_probs=12.4

Q ss_pred             hHHHHHHHHhcCC-CCCccCccccccC
Q psy8466         400 KRILTEHMKLHQG-ITYKCGLCSKEFS  425 (431)
Q Consensus       400 ~~~L~~H~~~H~g-~~~~C~~C~~~f~  425 (431)
                      ...++.|.++|+| ++|.|..|+..|.
T Consensus       128 ~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        128 QLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             eCHHHHHHHHhcCCccEECCCCCceeE
Confidence            3344445555544 4455555554444

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.76  E-value=0.0091  Score=54.63  Aligned_cols=126  Identities=25%  Similarity=0.487  Sum_probs=82.2

Q ss_pred             cccccc--cccccCChHHHHHHHHHhcCCCCcccccc---cccC------CHHHHHHHHHHhcCC---C--CccCccCcc
Q psy8466         171 RYKCDL--CSKKFSTKSYLTAHMKLHQGLKNKCDLCS---KEFS------SKSYLTEHMKLHQGI---K--NKCDLCSKE  234 (431)
Q Consensus       171 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~C~~C~---~~f~------~~~~L~~H~~~h~~~---~--~~C~~C~~~  234 (431)
                      .|.|+.  |..+......|..|.+..|+ .+-|.+|-   +.|.      ++..|..|...-...   +  +.|..|...
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~-~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG-FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC-cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            477864  77777778889999987765 35566663   3333      345566665432211   1  478999988


Q ss_pred             cCCHhHHHHHHHHhcCCCCCCCcCCcc-------cCChhHHHHHHhHhcCCCCCCCC--CC----cccCCHHHHHHHHHH
Q psy8466         235 FSTKSYLTEHMKLHQGIKNKCDLCSKE-------FSTKSYLTEHMKLHQGIKNKCDL--CS----KEFSTKSYLTEHMKL  301 (431)
Q Consensus       235 f~~~~~L~~H~~~h~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~C~~--C~----~~f~~~~~L~~H~~~  301 (431)
                      |-+...|..|+|..|.   .|-+|++.       |.+-..|..|.+.-+   |.|..  |-    ..|.....|..|+..
T Consensus       230 FYdDDEL~~HcR~~HE---~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h---y~ct~qtc~~~k~~vf~~~~el~~h~~~  303 (493)
T COG5236         230 FYDDDELRRHCRLRHE---ACHICDMVGPIRYQYFKSYEDLEAHFRNAH---YCCTFQTCRVGKCYVFPYHTELLEHLTR  303 (493)
T ss_pred             ecChHHHHHHHHhhhh---hhhhhhccCccchhhhhCHHHHHHHhhcCc---eEEEEEEEecCcEEEeccHHHHHHHHHH
Confidence            9999999999887664   45555543       666777877775432   44432  21    468888888888865


Q ss_pred             hC
Q psy8466         302 HQ  303 (431)
Q Consensus       302 h~  303 (431)
                      -+
T Consensus       304 ~h  305 (493)
T COG5236         304 FH  305 (493)
T ss_pred             Hh
Confidence            44

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.12  E-value=0.023  Score=52.03  Aligned_cols=73  Identities=23%  Similarity=0.473  Sum_probs=49.5

Q ss_pred             CccccchhccCCchHHHHHHhhhCCCcccccccc-------cccCCHHHHHHHHHHhCCCCCcccc--cc----cccCCh
Q psy8466         334 NKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCS-------KEFSWKGHLTEHRKLHQDIKNKCDL--CS----KEFSSK  400 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~C~~C~-------~~f~~~~~L~~H~~~H~~~~~~C~~--C~----~~F~~~  400 (431)
                      +.|..|...|..-..|.+|+|.-+..   |-+|+       .-|..-.+|..|.+.-+   |.|.+  |-    ..|...
T Consensus       221 P~C~FC~~~FYdDDEL~~HcR~~HE~---ChICD~v~p~~~QYFK~Y~~Le~HF~~~h---y~ct~qtc~~~k~~vf~~~  294 (493)
T COG5236         221 PLCIFCKIYFYDDDELRRHCRLRHEA---CHICDMVGPIRYQYFKSYEDLEAHFRNAH---YCCTFQTCRVGKCYVFPYH  294 (493)
T ss_pred             chhhhccceecChHHHHHHHHhhhhh---hhhhhccCccchhhhhCHHHHHHHhhcCc---eEEEEEEEecCcEEEeccH
Confidence            47888888888888888888765543   44444       34777788888866322   44443  22    578888


Q ss_pred             HHHHHHHHhcCC
Q psy8466         401 RILTEHMKLHQG  412 (431)
Q Consensus       401 ~~L~~H~~~H~g  412 (431)
                      ..|..|+..-||
T Consensus       295 ~el~~h~~~~h~  306 (493)
T COG5236         295 TELLEHLTRFHK  306 (493)
T ss_pred             HHHHHHHHHHhh
Confidence            889999877655

>PRK04860 hypothetical protein; Provisional

Probab=95.10  E-value=0.01  Score=49.67  Aligned_cols=35  Identities=17%  Similarity=0.611  Sum_probs=20.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFS  398 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~  398 (431)
                      +|.|. |+.   ....+.+|.++|++.+ |.|..|+..|.
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~  154 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLV  154 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeE
Confidence            45665 555   4555566666665554 66666665554

>KOG2482|consensus

Probab=95.04  E-value=0.083  Score=48.53  Aligned_cols=193  Identities=23%  Similarity=0.342  Sum_probs=95.5

Q ss_pred             HHHhhhhhcCCc--ccccccccccc-CChHHHHHHHHHhcCCCCcccccccccCCHHHHHHHHHHhcCCCCccCccCccc
Q psy8466         159 CQEKHMKLHQGV--RYKCDLCSKKF-STKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEF  235 (431)
Q Consensus       159 ~~~~h~~~~~~~--~~~C~~C~~~f-~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f  235 (431)
                      .|+.+++...+.  ..+|-.|...+ .+++.+..|+..-|+...-=   .........|..|++..- ..+.|-.|.+.|
T Consensus       130 aLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGl---pDniVyvnelLehLkekL-~r~~CLyCekif  205 (423)
T KOG2482|consen  130 ALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGL---PDNIVYVNELLEHLKEKL-ERLRCLYCEKIF  205 (423)
T ss_pred             HHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCC---CcceeeHHHHHHHHHHHH-hhheeeeecccc
Confidence            344555544444  56788887665 45566666765444321000   000112234455544321 135677888888


Q ss_pred             CCHhHHHHHHHHh--cCCCCCCCcCCcccC------ChhHHHHHHhH--h----c-------------CCC---CCCCCC
Q psy8466         236 STKSYLTEHMKLH--QGIKNKCDLCSKEFS------TKSYLTEHMKL--H----Q-------------GIK---NKCDLC  285 (431)
Q Consensus       236 ~~~~~L~~H~~~h--~~~~~~C~~C~~~f~------~~~~l~~H~~~--h----~-------------~~~---~~C~~C  285 (431)
                      +.+..|+.||+..  ....|+=..-.+-|.      .++....|...  .    .             +..   -.|-.|
T Consensus       206 rdkntLkeHMrkK~HrrinPknreYDkfyiINY~ev~ks~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC  285 (423)
T KOG2482|consen  206 RDKNTLKEHMRKKRHRRINPKNREYDKFYIINYLEVGKSWTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFC  285 (423)
T ss_pred             CCcHHHHHHHHhccCcccCCCccccceEEEEeHhhcCCccchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEee
Confidence            8888888887643  222222221111110      01111111100  0    0             111   278899


Q ss_pred             CcccCCHHHHHHHHHHhCCCCC-C-CCchhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHHHhhh
Q psy8466         286 SKEFSTKSYLTEHMKLHQGLKN-K-CDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLH  356 (431)
Q Consensus       286 ~~~f~~~~~L~~H~~~h~~~~~-~-C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~h  356 (431)
                      .....+...|..||++-+.-.. + =..=+..|-..-.+..-+|.. ..+-.|-.|.-.|.....|..||..+
T Consensus       286 ~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq-~~~~~c~~cd~~F~~e~~l~~hm~e~  357 (423)
T KOG2482|consen  286 TNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQ-KKKSRCAECDLSFWKEPGLLIHMVED  357 (423)
T ss_pred             ccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHH-hhccccccccccccCcchhhhhcccc
Confidence            9999999999999986543211 0 001112222222222222211 11236888888999999999998753

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.97  E-value=0.0056  Score=34.57  Aligned_cols=22  Identities=50%  Similarity=0.765  Sum_probs=13.5

Q ss_pred             CcccccccccCChHHHHHHHHh
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~  409 (431)
                      |.|..|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            4566666666666666666543

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG1146|consensus

Probab=94.74  E-value=0.0075  Score=64.75  Aligned_cols=146  Identities=21%  Similarity=0.278  Sum_probs=80.3

Q ss_pred             CCCCCcccCCHHHHHHHHHH-hCCCC-CCCCchhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHH-HHhhhCC
Q psy8466         282 CDLCSKEFSTKSYLTEHMKL-HQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTK-HMNLHQG  358 (431)
Q Consensus       282 C~~C~~~f~~~~~L~~H~~~-h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~-H~~~h~~  358 (431)
                      |..|+..+.....+..|+.. |...+ ++|+.|+..|+....|-.|+|..+.+.-. .+|-.. .....+.+ -.....+
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~-~~c~~g-q~~~~~arg~~~~~~~  516 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQS-AYCKAG-QNHPRLARGEVYRCPG  516 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccch-hHhHhc-cccccccccccccCCC
Confidence            34444445555555555443 22222 36666666666666666666653322111 111110 00000000 0011223


Q ss_pred             CcccccccccccCCHHHHHHHHHH--hC----------C-------------------------------C-CCcccccc
Q psy8466         359 IRYKCDLCSKEFSWKGHLTEHRKL--HQ----------D-------------------------------I-KNKCDLCS  394 (431)
Q Consensus       359 ~~~~C~~C~~~f~~~~~L~~H~~~--H~----------~-------------------------------~-~~~C~~C~  394 (431)
                      ++|.|..|..+++.+..|..|+..  |-          |                               + .+.|.+|+
T Consensus       517 ~p~~C~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~  596 (1406)
T KOG1146|consen  517 KPYPCRACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCS  596 (1406)
T ss_pred             CcccceeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhc
Confidence            468888888888888888888763  31          0                               1 16799999


Q ss_pred             cccCChHHHHHHHHh-cCC-CCCccCccccccCCCCC
Q psy8466         395 KEFSSKRILTEHMKL-HQG-ITYKCGLCSKEFSCKSN  429 (431)
Q Consensus       395 ~~F~~~~~L~~H~~~-H~g-~~~~C~~C~~~f~~~~~  429 (431)
                      +.-.-..+|+.||.. ++. .|.-|-.|+-.+.....
T Consensus       597 yetniarnlrihmtss~~s~~p~~~Lq~~it~~l~~~  633 (1406)
T KOG1146|consen  597 YETNIARNLRIHMTASPSSSPPSLVLQQNITSSLASL  633 (1406)
T ss_pred             chhhhhhccccccccCCCCCChHHHhhhcchhhcccc
Confidence            999999999999965 444 34666666666554443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.33  E-value=0.011  Score=33.30  Aligned_cols=21  Identities=43%  Similarity=0.833  Sum_probs=13.9

Q ss_pred             ccccccccccCCHHHHHHHHH
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            556666666666666666654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.93  E-value=0.05  Score=30.00  Aligned_cols=20  Identities=30%  Similarity=0.808  Sum_probs=12.5

Q ss_pred             cccccccccCChHHHHHHHHh
Q psy8466         389 KCDLCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       389 ~C~~C~~~F~~~~~L~~H~~~  409 (431)
                      .|+.||+.| ....|..|+.+
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHHh
Confidence            566666666 55666666653

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=93.03  E-value=0.085  Score=29.08  Aligned_cols=19  Identities=32%  Similarity=0.824  Sum_probs=10.2

Q ss_pred             cccccccccCCHHHHHHHHH
Q psy8466         362 KCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       362 ~C~~C~~~f~~~~~L~~H~~  381 (431)
                      .|+.||+.| ....|..|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            455555555 4455555544

>KOG1146|consensus

Probab=92.30  E-value=0.085  Score=57.10  Aligned_cols=47  Identities=17%  Similarity=0.235  Sum_probs=32.0

Q ss_pred             cccccccccChhHHHhhhhhcCC--ccccccccccccCChHHHHHHHHH
Q psy8466         147 KSDHERRSINYKCQEKHMKLHQG--VRYKCDLCSKKFSTKSYLTAHMKL  193 (431)
Q Consensus       147 ~~~~~~~~~~~~~~~~h~~~~~~--~~~~C~~C~~~f~~~~~L~~H~~~  193 (431)
                      +..++..+.....+..|+.....  +-|.|+.|++.|+....|..|||.
T Consensus       439 ~~~~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRs  487 (1406)
T KOG1146|consen  439 LTKAEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRS  487 (1406)
T ss_pred             ccchhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccc
Confidence            33444455444455555443222  368999999999999999999997

>KOG2785|consensus

Probab=91.84  E-value=1.2  Score=42.04  Aligned_cols=77  Identities=22%  Similarity=0.404  Sum_probs=42.3

Q ss_pred             cccccccccccCChHHHHHHHHHh-cCC--C----CcccccccccCCHHHHHHHHH----HhcCCCCccCccCcccCCHh
Q psy8466         171 RYKCDLCSKKFSTKSYLTAHMKLH-QGL--K----NKCDLCSKEFSSKSYLTEHMK----LHQGIKNKCDLCSKEFSTKS  239 (431)
Q Consensus       171 ~~~C~~C~~~f~~~~~L~~H~~~h-~~~--~----~~C~~C~~~f~~~~~L~~H~~----~h~~~~~~C~~C~~~f~~~~  239 (431)
                      -|.|.-|...|.+...-+.|+++- |..  +    -.=++=-..|..+..-..-..    .-.+..+.|.+|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            388999999999999899998742 110  0    011122222222211111100    11223357888888888877


Q ss_pred             HHHHHHHH
Q psy8466         240 YLTEHMKL  247 (431)
Q Consensus       240 ~L~~H~~~  247 (431)
                      ....|+..
T Consensus        83 a~~~hl~S   90 (390)
T KOG2785|consen   83 AHENHLKS   90 (390)
T ss_pred             hHHHHHHH
Confidence            77777754

>KOG2785|consensus

Probab=91.69  E-value=0.62  Score=43.87  Aligned_cols=50  Identities=24%  Similarity=0.361  Sum_probs=36.2

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC------------------------CCCcccccc---cccCChHHHHHHHHh
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQD------------------------IKNKCDLCS---KEFSSKRILTEHMKL  409 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~------------------------~~~~C~~C~---~~F~~~~~L~~H~~~  409 (431)
                      |-.|-.|++.|.+...-..||..++|                        .-+.|-+|+   +.|.+....+.||..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            34566677777776666677666554                        225688888   999999999999965

>KOG4173|consensus

Probab=91.28  E-value=0.14  Score=43.63  Aligned_cols=42  Identities=24%  Similarity=0.527  Sum_probs=23.0

Q ss_pred             hhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHHHhh
Q psy8466         312 CSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNL  355 (431)
Q Consensus       312 C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~  355 (431)
                      |...|.....+..|..+-++  ..|..|.+.|.+..-|..|+..
T Consensus        87 c~~~~d~lD~~E~hY~~~h~--~sCs~C~r~~Pt~hLLd~HI~E  128 (253)
T KOG4173|consen   87 CCQVFDALDDYEHHYHTLHG--NSCSFCKRAFPTGHLLDAHILE  128 (253)
T ss_pred             hHHHHhhhhhHHHhhhhccc--chhHHHHHhCCchhhhhHHHHH
Confidence            55555555555555433222  3566666666666666666543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.23  E-value=0.037  Score=54.78  Aligned_cols=47  Identities=30%  Similarity=0.495  Sum_probs=22.6

Q ss_pred             cccccCCHHHHHHHHHHhCCCC---CcccccccccCChHHHHHHHHhcCC
Q psy8466         366 CSKEFSWKGHLTEHRKLHQDIK---NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       366 C~~~f~~~~~L~~H~~~H~~~~---~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |-..+.....+..|...|....   +.+..|.+.|.....|..|++.|.-
T Consensus       394 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  443 (467)
T COG5048         394 CIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTN  443 (467)
T ss_pred             hhhhhccccccccccccccccCCcCCCCCcchhhccCccccccccccccc
Confidence            4444444444444444443222   3445555555555555555555554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.15  E-value=0.21  Score=29.89  Aligned_cols=22  Identities=27%  Similarity=0.563  Sum_probs=14.7

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      +|.|++|++.|.....+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777776666666654

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=90.11  E-value=0.19  Score=30.05  Aligned_cols=23  Identities=26%  Similarity=0.517  Sum_probs=20.6

Q ss_pred             CCcccccccccCChHHHHHHHHh
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~  409 (431)
                      +|.|.+|++.|.....+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            47899999999999999999864

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=89.92  E-value=0.11  Score=45.21  Aligned_cols=43  Identities=30%  Similarity=0.628  Sum_probs=23.5

Q ss_pred             CCCCchhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHH
Q psy8466         307 NKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKH  352 (431)
Q Consensus       307 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H  352 (431)
                      +.|.+|++.|....-|.+|++..+   |+|.+|.|...+-..|..|
T Consensus        11 pwcwycnrefddekiliqhqkakh---fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQKAKH---FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             ceeeecccccchhhhhhhhhhhcc---ceeeeehhhhccCCCceee
Confidence            456666666666655555554322   5566666555554445444

>KOG2893|consensus

Probab=89.79  E-value=0.093  Score=45.64  Aligned_cols=48  Identities=29%  Similarity=0.614  Sum_probs=40.7

Q ss_pred             CCccccchhccCCchHHHHHHhhhCCCcccccccccccCCHHHHHHH-HHHh
Q psy8466         333 KNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEH-RKLH  383 (431)
Q Consensus       333 ~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H-~~~H  383 (431)
                      ++.|=+|++.|-....|..|++..+   |+|.+|.+...+--.|..| +++|
T Consensus        10 kpwcwycnrefddekiliqhqkakh---fkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   10 KPWCWYCNREFDDEKILIQHQKAKH---FKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             Cceeeecccccchhhhhhhhhhhcc---ceeeeehhhhccCCCceeehhhhh
Confidence            4679999999999999999988654   9999999998888888888 5566

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=87.60  E-value=0.27  Score=29.16  Aligned_cols=10  Identities=20%  Similarity=0.830  Sum_probs=5.0

Q ss_pred             CCCccCcccc
Q psy8466         413 ITYKCGLCSK  422 (431)
Q Consensus       413 ~~~~C~~C~~  422 (431)
                      .|+.|+.||.
T Consensus        16 ~~~~CP~Cg~   25 (33)
T cd00350          16 APWVCPVCGA   25 (33)
T ss_pred             CCCcCcCCCC
Confidence            3455555543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=86.47  E-value=0.17  Score=50.06  Aligned_cols=60  Identities=35%  Similarity=0.493  Sum_probs=43.0

Q ss_pred             cccccccccccCCHHHHHHHHH--HhCCC--C-Cccc--ccccccCChHHHHHHHHhcCC-CCCccCc
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK--LHQDI--K-NKCD--LCSKEFSSKRILTEHMKLHQG-ITYKCGL  419 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~--~H~~~--~-~~C~--~C~~~F~~~~~L~~H~~~H~g-~~~~C~~  419 (431)
                      ++.|..|...|.....|..|.+  .|.++  + +.|+  .|++.|.+...+..|..+|++ .++.+..
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  356 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKL  356 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCcccccc
Confidence            5677777777777777777777  67766  4 6777  677777777777777777777 3444443

>KOG2186|consensus

Probab=85.31  E-value=0.39  Score=42.45  Aligned_cols=44  Identities=20%  Similarity=0.516  Sum_probs=19.4

Q ss_pred             CCCchhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHHH
Q psy8466         308 KCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHM  353 (431)
Q Consensus       308 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H~  353 (431)
                      .|..||...... .+.+|+-..++..|.|-.|++.|.. .++..|.
T Consensus         5 tCnvCgEsvKKp-~vekH~srCrn~~fSCIDC~k~F~~-~sYknH~   48 (276)
T KOG2186|consen    5 TCNVCGESVKKP-QVEKHMSRCRNAYFSCIDCGKTFER-VSYKNHT   48 (276)
T ss_pred             ehhhhhhhcccc-chHHHHHhccCCeeEEeeccccccc-chhhhhh
Confidence            344454444322 2333444444444445555555544 3344443

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=84.65  E-value=1.6  Score=34.10  Aligned_cols=25  Identities=24%  Similarity=0.534  Sum_probs=22.8

Q ss_pred             Ccc----cccccccCChHHHHHHHHhcCC
Q psy8466         388 NKC----DLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       388 ~~C----~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.|    ..|++.+.+...+..|++.+||
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            579    9999999999999999999886

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=82.57  E-value=0.79  Score=35.60  Aligned_cols=12  Identities=33%  Similarity=0.789  Sum_probs=5.8

Q ss_pred             cccccccccccC
Q psy8466         360 RYKCDLCSKEFS  371 (431)
Q Consensus       360 ~~~C~~C~~~f~  371 (431)
                      |..|+.||..|.
T Consensus        26 PivCP~CG~~~~   37 (108)
T PF09538_consen   26 PIVCPKCGTEFP   37 (108)
T ss_pred             CccCCCCCCccC
Confidence            444555554444

The function of members of this family is unknown.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=81.96  E-value=2.3  Score=33.16  Aligned_cols=25  Identities=20%  Similarity=0.442  Sum_probs=22.8

Q ss_pred             ccc----cccccccCCHHHHHHHHHHhCC
Q psy8466         361 YKC----DLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       361 ~~C----~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      |.|    ..|+..+.+...|..|.+.++|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            889    9999999999999999997764

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=80.40  E-value=1  Score=30.22  Aligned_cols=31  Identities=19%  Similarity=0.324  Sum_probs=16.6

Q ss_pred             CcccccccccCChHHHHHHHHhcCCCCCccCcccc
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSK  422 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g~~~~C~~C~~  422 (431)
                      |.|+.||..-..+    -+.-+-.|.+|.|+.||.
T Consensus        28 F~CPnCGe~~I~R----c~~CRk~g~~Y~Cp~CGF   58 (61)
T COG2888          28 FPCPNCGEVEIYR----CAKCRKLGNPYRCPKCGF   58 (61)
T ss_pred             eeCCCCCceeeeh----hhhHHHcCCceECCCcCc
Confidence            5566666443322    233344556777777764

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	431
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-23
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-21
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-05
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		5e-09
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-09
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-08
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-07
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		7e-09
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		1e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-06
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-06
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-08
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-06
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-08
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-06
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-08
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-08
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-06
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-06
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		9e-08
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-05
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		4e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		6e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-06
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		2e-06
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		2e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		3e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-05
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		7e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		7e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		5e-05
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		6e-05
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		1e-04
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		9e-05
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-04
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		1e-04
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-04
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		3e-04
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		4e-04
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		5e-04
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		6e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  107 bits (268), Expect = 1e-23,   Method: Compositional matrix adjust.
 Identities = 74/188 (39%), Positives = 91/188 (48%), Gaps = 7/188 (3%)
Query: 207 EFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFST 264
           EF S S + +   L  G K   C  C K FS   +L EH + H G K  KC  C K FS 
Sbjct: 3   EFGSSSSVAQ-AALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 265 KSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYL 322
           K  LT H + H G K  KC  C K FS ++ L  H + H G K   C  C K FS+ ++L
Sbjct: 62  KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 323 TEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHR 380
             H + H G K  KC  C K FS + NL  H   H G + YKC  C K FS +  L  H+
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQ 181
Query: 381 KLHQDIKN 388
           + H   K 
Sbjct: 182 RTHTGKKT 189

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  100 bits (249), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 70/176 (39%), Positives = 84/176 (47%), Gaps = 7/176 (3%)
Query: 261 EFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSR 318
           EF + S + +   L  G K   C  C K FS   +L EH + H G K  KC  C K FS 
Sbjct: 3   EFGSSSSVAQ-AALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSD 61
Query: 319 KSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHL 376
           K  LT H + H G K  KC  C K FS ++NL  H   H G + Y C  C K FS   HL
Sbjct: 62  KKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHL 121
Query: 377 TEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNL 430
             H++ H   K  KC  C K FS +  L  H + H G   YKC  C K FS +  L
Sbjct: 122 RAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDAL 177

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 65.5 bits (158), Expect = 6e-11,   Method: Compositional matrix adjust.
 Identities = 37/82 (45%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL 365
           KC  C K FS+ S L +H + H G K  KC  C K FS  S+L KH   H G + YKC  
Sbjct: 6   KCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCPE 65
Query: 366 CSKEFSWKGHLTEHRKLHQDIK 387
           C K FS   HL+ H++ HQ+ K
Sbjct: 66  CGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/73 (39%), Positives = 37/73 (50%), Gaps = 2/73 (2%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQG-ITYKCG 418
           YKC  C K FS   +L +H++ H   K  KC  C K FS    L +H + H G   YKC 
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCP 64
Query: 419 LCSKEFSCKSNLT 431
            C K FS   +L+
Sbjct: 65  ECGKSFSRSDHLS 77

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/71 (40%), Positives = 43/71 (60%), Gaps = 2/71 (2%)
Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKE 396
           C K F+HKS   +HM++H G+R Y C +C K+F  K HL  H K+H  IK  +C++C+K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 397 FSSKRILTEHM 407
           F  +     H+
Sbjct: 75  FMWRDSFHRHV 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 58.9 bits (141), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 48/81 (59%), Gaps = 4/81 (4%)
Query: 172 YKCDL--CSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN-K 227
           Y C +  C ++FS K+ L  H+++H G K  +C +C + FS ++ L  H++ H G K   
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFA 64
Query: 228 CDLCSKEFSTKSYLTEHMKLH 248
           CD+C ++F+T    T H K+H
Sbjct: 65  CDICGRKFATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 231 CSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKE 288
           C + FS K+ L  H+++H G K  +C +C + FS ++ L  H++ H G K   CD+C ++
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRK 71
Query: 289 FSTKSYLTEHMKLH 302
           F+T    T H K+H
Sbjct: 72  FATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 53.5 bits (127), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKE 342
           C + FS K+ L  H+++H G K  +C +C + FS+++ L  H++ H G K   CD+C ++
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRK 71
Query: 343 FSHKSNLTKHMNLH 356
           F+     T+H  +H
Sbjct: 72  FATLHTRTRHTKIH 85

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 52.8 bits (125), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKE 396
           C + FS K+NL  H+ +H G + ++C +C + FS +  L  H + H   K   CD+C ++
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRK 71
Query: 397 FSSKRILTEHMKLH 410
           F++    T H K+H
Sbjct: 72  FATLHTRTRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 58.5 bits (140), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/74 (37%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 258 CSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKE 315
           C + FS  S LT H+++H G K  +C +C + FS   +LT H++ H G K   CD+C ++
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 316 FSRKSYLTEHMKLH 329
           F+R      H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 53.9 bits (128), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKE 396
           C + FS  SNLT+H+ +H G + ++C +C + FS   HLT H + H   K   CD+C ++
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 397 FSSKRILTEHMKLH 410
           F+       H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 57.8 bits (138), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKE 342
           C + FS  + LT H+++H G K  +C +C + FSR  +LT H++ H G K   CD+C ++
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 343 FSHKSNLTKHMNLH 356
           F+      +H  +H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKE 396
           C + FS  + LT+H+ +H G + ++C +C + FS   HLT H + H   K   CD+C ++
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 397 FSSKRILTEHMKLH 410
           F+       H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 57.4 bits (137), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKE 342
           C + FS  + LT H+++H G K  +C +C + FSR  +LT H++ H G K   CD+C ++
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 343 FSHKSNLTKHMNLH 356
           F+      +H  +H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKE 396
           C + FS  ++LT+H+ +H G + ++C +C + FS   HLT H + H   K   CD+C ++
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 397 FSSKRILTEHMKLH 410
           F+       H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 57.4 bits (137), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKE 342
           C + FS    LT H+++H G K  +C +C + FSR  +LT H++ H G K   CD+C ++
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 343 FSHKSNLTKHMNLH 356
           F+      +H  +H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKE 396
           C + FS   +LT+H+ +H G + ++C +C + FS   HLT H + H   K   CD+C ++
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 397 FSSKRILTEHMKLH 410
           F+       H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKE 342
           C + FS    LT H+++H G K  +C +C + FSR  +LT H++ H G K   CD+C ++
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 70
Query: 343 FSHKSNLTKHMNLH 356
           F+      +H  +H
Sbjct: 71  FARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKE 396
           C + FS    LT+H+ +H G + ++C +C + FS   HLT H + H   K   CD+C ++
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 70
Query: 397 FSSKRILTEHMKLH 410
           F+       H K+H
Sbjct: 71  FARSDERKRHTKIH 84

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKE 342
           C + FS    LT H+++H G K  +C +C + FSR  +LT H++ H G K   CD+C ++
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 343 FSHKSNLTKHMNLH 356
           F+      +H  +H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/74 (33%), Positives = 40/74 (54%), Gaps = 2/74 (2%)
Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKE 396
           C + FS    LT+H+ +H G + ++C +C + FS   HLT H + H   K   CD+C ++
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 397 FSSKRILTEHMKLH 410
           F+       H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 56.6 bits (135), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 258 CSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKE 315
           C + FS    LT H+++H G K  +C +C + FS   +LT H++ H G K   CD+C ++
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 316 FSRKSYLTEHMKLH 329
           F+R      H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 54.3 bits (129), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 312 CSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKE 369
           C + FSR   LT H+++H G K  +C +C + FS   +LT H+  H G + + CD+C ++
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 370 FSWKGHLTEHRKLH 383
           F+       H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 28/81 (34%), Positives = 47/81 (58%), Gaps = 4/81 (4%)
Query: 172 YKCDL--CSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN-K 227
           Y C +  C ++FS K+ L  H+++H G K  +C +C + FS  + L +H++ H G K   
Sbjct: 5   YACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFA 64
Query: 228 CDLCSKEFSTKSYLTEHMKLH 248
           CD+C ++F+T      H K+H
Sbjct: 65  CDICGRKFATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 231 CSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKE 288
           C + FS K+ L  H+++H G K  +C +C + FS  + L +H++ H G K   CD+C ++
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRK 71
Query: 289 FSTKSYLTEHMKLH 302
           F+T      H K+H
Sbjct: 72  FATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 43/74 (58%), Gaps = 2/74 (2%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKE 342
           C + FS K+ L  H+++H G K  +C +C + FS+ + L +H++ H G K   CD+C ++
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRK 71
Query: 343 FSHKSNLTKHMNLH 356
           F+      +H  +H
Sbjct: 72  FATLHTRDRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 48.9 bits (115), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 41/74 (55%), Gaps = 2/74 (2%)
Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKE 396
           C + FS K+NL  H+ +H G + ++C +C + FS    L +H + H   K   CD+C ++
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRK 71
Query: 397 FSSKRILTEHMKLH 410
           F++      H K+H
Sbjct: 72  FATLHTRDRHTKIH 85

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 54.7 bits (130), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 7/106 (6%)
Query: 258 CSKEFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGLKN-KCDLCS 313
           C+K +   S+L  H + H G K  +CD   C + FS    L  H + H G+K  +C  C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73
Query: 314 KEFSRKSYLTEHMKLHQGIKN---KCDLCSKEFSHKSNLTKHMNLH 356
           ++FSR  +L  H + H G K    +   C K+F+    L +H N+H
Sbjct: 74  RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 312 CSKEFSRKSYLTEHMKLHQGIKN-KCDL--CSKEFSHKSNLTKHMNLHQGIR-YKCDLCS 367
           C+K + + S+L  H + H G K  +CD   C + FS    L +H   H G++ ++C  C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73
Query: 368 KEFSWKGHLTEHRKLHQDIKN---KCDLCSKEFSSKRILTEHMKLH 410
           ++FS   HL  H + H   K    +   C K+F+    L  H  +H
Sbjct: 74  RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 52.8 bits (125), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 282 CDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLC 339
           C +C K F   S L+ H+ +H   +   C  C K F +KS + +H  +H G K +KC +C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 340 SKEFSHKSNLTKHMNLHQG 358
            K FS  SNL  H   H G
Sbjct: 64  GKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 48.9 bits (115), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 2/79 (2%)
Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC 393
           C +C K F   S L+ H+ +H   R Y C  C K F  K  + +H  +H   K +KC +C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 394 SKEFSSKRILTEHMKLHQG 412
            K FS    L  H + H G
Sbjct: 64  GKAFSQSSNLITHSRKHTG 82

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL 365
           KC++C K FSRK  L  HM+ H G+K  KC  C    +  S+L KH+ +H   R +KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 366 CSKEFSWKGHLTEHRKLH 383
           C         LT H + H
Sbjct: 70  CPYASRNSSQLTVHLRSH 87

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 50.4 bits (119), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/50 (50%), Positives = 31/50 (62%), Gaps = 1/50 (2%)
Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
           KCD C K FSH S+L+KH   H G + YKCD C K F  + HL  H ++H
Sbjct: 20  KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVH 69

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 38/110 (34%), Positives = 51/110 (46%), Gaps = 6/110 (5%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDL--CSK 341
           C+K F   S + +H+  H    + C  C K F   S L  H  +H G K  +C    C K
Sbjct: 13  CTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGK 72
Query: 342 EFSHKSNLTKHMNLHQGIR-YKC--DLCSKEFSWKGHLTEHRKLHQDIKN 388
            FS   NL  H+ +H G R Y C  D C+K+F+   +L  H   H   KN
Sbjct: 73  RFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 50.1 bits (118), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 36/77 (46%), Gaps = 2/77 (2%)
Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLC 393
           C  C + F+   NL  H   H   R Y CD+C K F  + HL +HR +H   K  KC  C
Sbjct: 20  CKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQEC 79
Query: 394 SKEFSSKRILTEHMKLH 410
            K F   R L  H  LH
Sbjct: 80  GKGFCQSRTLAVHKTLH 96

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 50.1 bits (118), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 44/82 (53%), Gaps = 6/82 (7%)
Query: 255 CDL--CSKEFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGLKN-K 308
           CD   C+K ++  S+L  H++ H G K  KC    C   F+    LT H + H G K  +
Sbjct: 18  CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ 77
Query: 309 CDLCSKEFSRKSYLTEHMKLHQ 330
           C +C++ FSR  +L  HMK HQ
Sbjct: 78  CGVCNRSFSRSDHLALHMKRHQ 99

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 47.4 bits (111), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 6/83 (7%)
Query: 309 CDL--CSKEFSRKSYLTEHMKLHQGIKN-KCDL--CSKEFSHKSNLTKHMNLHQGIR-YK 362
           CD   C+K +++ S+L  H++ H G K  KC    C   F+    LT+H   H G + ++
Sbjct: 18  CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ 77
Query: 363 CDLCSKEFSWKGHLTEHRKLHQD 385
           C +C++ FS   HL  H K HQ+
Sbjct: 78  CGVCNRSFSRSDHLALHMKRHQN 100

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 55/112 (49%), Gaps = 7/112 (6%)
Query: 173 KCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKNK---- 227
           +C  C KKF +K YL  H + H G K  +C  C K +  K  L EH   +   +++    
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 228 CDLCSKEFSTKSYLTEHMKLHQG-IKNKCDLCSKEFSTKSYLTEHM-KLHQG 277
           C +C + F  +  L  HM  H G +  KC  CS++F  K  L  HM KLH G
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 48.5 bits (114), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 39/112 (34%), Positives = 56/112 (50%), Gaps = 7/112 (6%)
Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKNK---- 308
           +C  C K+F +K YL  H + H G K  +C  C K +  K  L EH   +   +++    
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 309 CDLCSKEFSRKSYLTEHMKLHQG-IKNKCDLCSKEFSHKSNLTKHM-NLHQG 358
           C +C + F R+  L  HM  H G +  KC  CS++F  K +L  HM  LH G
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 47.8 bits (112), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 39/115 (33%), Positives = 57/115 (49%), Gaps = 9/115 (7%)
Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKH-----MNLHQGIRY 361
           +C  C K+F  K YL  H + H G K  +C  C K +  K NL +H     MN  + + +
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV-F 67
Query: 362 KCDLCSKEFSWKGHLTEHRKLHQ-DIKNKCDLCSKEFSSKRILTEHM-KLHQGIT 414
            C +C + F  +  L  H   H  ++  KC  CS++F  K+ L  HM KLH G +
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 45.8 bits (107), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQG 412
           YKCD C   F +KG+L  H+ +H   K  +C++C  +F+    L  H ++H G
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 45.4 bits (106), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 51/156 (32%), Positives = 66/156 (42%), Gaps = 16/156 (10%)
Query: 171 RYKCDL--CSKKFSTKSYLTAHMKLHQGLKN---KCDLCSKEFSSKSYLTEHMKLHQGIK 225
           RY C    C   ++    L AH+  H G K    K + C K F+S  +LT H   H G K
Sbjct: 12  RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEK 71
Query: 226 N---KCDLCSKEFSTKSYLTEHMKLHQGIK---NKCDL--CSKEFSTKSYLTEHMKLH-Q 276
           N     D C   F+TK+ + +H      IK     C    C K F   + L  H   H Q
Sbjct: 72  NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ 131
Query: 277 GIKNKC--DLCSKEFSTKSYLTEHMKLHQGLKNKCD 310
            +  +C  + C K FS  S L  H K+H G   K D
Sbjct: 132 QLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 167

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 44.3 bits (103), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 49/156 (31%), Positives = 65/156 (41%), Gaps = 19/156 (12%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLKN---KCDLCSKEFSRKSYLTEHMKLHQGIKN---KCDL 338
           C   ++    L  H+  H G K    K + C K F+   +LT H   H G KN     D 
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79
Query: 339 CSKEFSHKSNLTKHMNLHQGIR---YKCDL--CSKEFSWKGHLTEHRKLH-QDIKNKC-- 390
           C   F+ K+N+ KH N    I+   Y C    C K F     L  H+  H Q +  +C  
Sbjct: 80  CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH 139
Query: 391 DLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFSC 426
           + C K FS    L  H K+H G       C K+ SC
Sbjct: 140 EGCDKRFSLPSRLKRHEKVHAGYP-----CKKDDSC 170

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 44.7 bits (104), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 255 CDL--CSKEFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGLKN-K 308
           CD   C K ++  S+L  H++ H G K   CD   C  +F+    LT H + H G +  +
Sbjct: 9   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 68
Query: 309 CDLCSKEFSRKSYLTEHMKLH 329
           C  C + FSR  +L  HMK H
Sbjct: 69  CQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 309 CDL--CSKEFSRKSYLTEHMKLHQGIKN-KCDL--CSKEFSHKSNLTKHMNLHQGIR-YK 362
           CD   C K +++ S+L  H++ H G K   CD   C  +F+    LT+H   H G R ++
Sbjct: 9   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 68
Query: 363 CDLCSKEFSWKGHLTEHRKLH 383
           C  C + FS   HL  H K H
Sbjct: 69  CQKCDRAFSRSDHLALHMKRH 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 44.7 bits (104), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 255 CDL--CSKEFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGLKN-K 308
           CD   C K ++  S+L  H++ H G K   CD   C  +F+    LT H + H G +  +
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 309 CDLCSKEFSRKSYLTEHMKLH 329
           C  C + FSR  +L  HMK H
Sbjct: 68  CQKCDRAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 6/81 (7%)
Query: 309 CDL--CSKEFSRKSYLTEHMKLHQGIKN-KCDL--CSKEFSHKSNLTKHMNLHQGIR-YK 362
           CD   C K +++ S+L  H++ H G K   CD   C  +F+    LT+H   H G R ++
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67
Query: 363 CDLCSKEFSWKGHLTEHRKLH 383
           C  C + FS   HL  H K H
Sbjct: 68  CQKCDRAFSRSDHLALHMKRH 88

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 43.1 bits (100), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 38/82 (46%), Gaps = 5/82 (6%)
Query: 282 CDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKNK---CD 337
           C++C K F    +L  H   H G K   C +C   F RK  ++ H++ H G   K   C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 338 LCSKEFSHKSNLTKHM-NLHQG 358
            C K FS   +L  H+  +H G
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHSG 91

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 42.7 bits (99), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 26/49 (53%), Gaps = 1/49 (2%)
Query: 309 CDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLH 356
           C  C K FSR S L +H ++H G K  KC  C K FS  S L  H  +H
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 36/115 (31%), Positives = 52/115 (45%), Gaps = 16/115 (13%)
Query: 258 CSKEFSTKSYLTEHMKL-HQGIKNK---------CDLCSKEFSTKSYLTEHMKLHQGLKN 307
           C + FST   L  H+ + H G   +         C    K F  K  L  H+++H G K 
Sbjct: 31  CDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKP 90
Query: 308 -KCDL--CSKEFSRKSYLTEHMKLHQGIKN-KCDL--CSKEFSHKSNLTKHMNLH 356
             C    C K F+R   L  H + H G K  KC+   C + F++ S+  KHM++H
Sbjct: 91  FPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 42.4 bits (98), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 39/116 (33%), Positives = 56/116 (48%), Gaps = 15/116 (12%)
Query: 254 KCDLCSKEFSTKSYLTEHMK---LHQGIKN---KCDLCSKE---FSTKSYLTEHMKLHQG 304
           + D CS+EF ++  L  H+    +H   K        CS+E   F  +  L  HM+ H G
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64
Query: 305 LK-NKCDL--CSKEFSRKSYLTEHMKLHQGIKN---KCDLCSKEFSHKSNLTKHMN 354
            K +KC    C K +SR   L  H++ H G K    + + CSK FS+ S+  KH N
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQN 120

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 42.0 bits (97), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 28/46 (60%), Gaps = 1/46 (2%)
Query: 285 CSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLH 329
           C + FS    LT H+++H G K  +C +C + FSR  +LT H++ H
Sbjct: 27  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	431
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-39
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-38
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-36
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	9e-35
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-34
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	5e-15
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-32
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-31
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-29
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	8e-27
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-19
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-25
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-24
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-24
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-22
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-22
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	6e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-16
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-22
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-21
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-17
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-21
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-21
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-09
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-20
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-17
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-16
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-18
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-20
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-19
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-17
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	7e-10
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-19
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-18
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-19
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-05
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-17
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-15
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-14
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-14
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-14
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-17
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-16
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	7e-16
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-15
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-14
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-14
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-17
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-15
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-15
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	9e-14
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-13
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-11
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-06
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-13
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-13
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-12
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-12
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-12
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-12
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-06
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	8e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-08
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	7e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-08
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	9e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-08
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-07
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-06
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	7e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	9e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-05
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	8e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	2e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	8e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	3e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	8e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	7e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	9e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  137 bits (349), Expect = 6e-39
 Identities = 70/182 (38%), Positives = 85/182 (46%), Gaps = 6/182 (3%)

Query: 208 FSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTK 265
               S       L  G K   C  C K FS   +L EH + H G K  KC  C K FS K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 266 SYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLT 323
             LT H + H G K  KC  C K FS ++ L  H + H G K   C  C K FS+ ++L 
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 324 EHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRK 381
            H + H G K  KC  C K FS + NL  H   H G + YKC  C K FS +  L  H++
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

Query: 382 LH 383
            H
Sbjct: 183 TH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  134 bits (341), Expect = 7e-38
 Identities = 72/184 (39%), Positives = 84/184 (45%), Gaps = 6/184 (3%)

Query: 181 FSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTK 238
               S   A   L  G K   C  C K FS   +L EH + H G K  KC  C K FS K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 239 SYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLT 296
             LT H + H G K  KC  C K FS ++ L  H + H G K   C  C K FS  ++L 
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 297 EHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMN 354
            H + H G K  KC  C K FSR+  L  H + H G K  KC  C K FS +  L  H  
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

Query: 355 LHQG 358
            H G
Sbjct: 183 THTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  129 bits (328), Expect = 5e-36
 Identities = 69/184 (37%), Positives = 85/184 (46%), Gaps = 6/184 (3%)

Query: 235 FSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTK 292
               S       L  G K   C  C K FS   +L EH + H G K  KC  C K FS K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 293 SYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLT 350
             LT H + H G K  KC  C K FS+++ L  H + H G K   C  C K FS  ++L 
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMK 408
            H   H G + YKC  C K FS + +L  H++ H   K  KC  C K FS +  L  H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

Query: 409 LHQG 412
            H G
Sbjct: 183 THTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  126 bits (320), Expect = 9e-35
 Identities = 70/178 (39%), Positives = 84/178 (47%), Gaps = 6/178 (3%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMK 219
               L  G + Y C  C K FS   +L  H + H G K  KC  C K FS K  LT H +
Sbjct: 11  AQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQR 70

Query: 220 LHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQG 277
            H G K  KC  C K FS ++ L  H + H G K   C  C K FS  ++L  H + H G
Sbjct: 71  THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTG 130

Query: 278 IK-NKCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
            K  KC  C K FS +  L  H + H G K  KC  C K FSR+  L  H + H G K
Sbjct: 131 EKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  126 bits (318), Expect = 1e-34
 Identities = 68/176 (38%), Positives = 79/176 (44%), Gaps = 6/176 (3%)

Query: 262 FSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRK 319
               S       L  G K   C  C K FS   +L EH + H G K  KC  C K FS K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 320 SYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLT 377
             LT H + H G K  KC  C K FS ++NL  H   H G + Y C  C K FS   HL 
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 378 EHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
            H++ H   K  KC  C K FS +  L  H + H G   YKC  C K FS +  L 
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALN 178

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 72.1 bits (178), Expect = 5e-15
 Identities = 41/111 (36%), Positives = 50/111 (45%), Gaps = 15/111 (13%)

Query: 157 YKCQE------------KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCD 202
           YKC E             H + H G + Y C  C K FS  ++L AH + H G K  KC 
Sbjct: 78  YKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCP 137

Query: 203 LCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
            C K FS +  L  H + H G K  KC  C K FS +  L  H + H G K
Sbjct: 138 ECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  120 bits (302), Expect = 3e-32
 Identities = 56/188 (29%), Positives = 73/188 (38%), Gaps = 19/188 (10%)

Query: 162 KHMKLHQGVR-YKCDL--CSKKFSTKSYLTAHMKLHQGLK-NKCD--LCSKEFSSKSYLT 215
               L    + Y C    C   ++    L AH+  H G K   C    C K F+S  +LT
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 216 EHMKLHQGIKN-KCD--LCSKEFSTKSYLTEHMKLHQGIKN---KCDL--CSKEFSTKSY 267
            H   H G KN  CD   C   F+TK+ + +H      IK     C    C K F   + 
Sbjct: 62  RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121

Query: 268 LTEHMKLHQGIKN-KC--DLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLT 323
           L  H   H      +C  + C K FS  S L  H K+H G    K D CS      +   
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181

Query: 324 EHMK-LHQ 330
           +H+   HQ
Sbjct: 182 KHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  117 bits (295), Expect = 3e-31
 Identities = 53/188 (28%), Positives = 72/188 (38%), Gaps = 19/188 (10%)

Query: 217 HMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCD--LCSKEFSTKSYLTE 270
              L    K   C    C   ++    L  H+  H G K   C    C K F++  +LT 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 271 HMKLHQGIKN-KCD--LCSKEFSTKSYLTEHMKLHQGLKN---KCDL--CSKEFSRKSYL 322
           H   H G KN  CD   C   F+TK+ + +H      +K     C    C K F + + L
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122

Query: 323 TEHMKLHQGIKN-KC--DLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTE 378
             H   H      +C  + C K FS  S L +H  +H G    K D CS          +
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182

Query: 379 H-RKLHQD 385
           H  + HQD
Sbjct: 183 HVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  111 bits (281), Expect = 3e-29
 Identities = 52/187 (27%), Positives = 70/187 (37%), Gaps = 19/187 (10%)

Query: 244 HMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCD--LCSKEFSTKSYLTE 297
              L    K   C    C   ++    L  H+  H G K   C    C K F++  +LT 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 298 HMKLHQGLKN-KCD--LCSKEFSRKSYLTEHMKLHQGIKN---KCDL--CSKEFSHKSNL 349
           H   H G KN  CD   C   F+ K+ + +H      IK     C    C K F   + L
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122

Query: 350 TKHMNLHQGIR-YKC--DLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTE 405
             H   H     Y+C  + C K FS    L  H K+H      K D CS    +  +  +
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182

Query: 406 HMK-LHQ 411
           H+   HQ
Sbjct: 183 HVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  105 bits (264), Expect = 8e-27
 Identities = 51/179 (28%), Positives = 65/179 (36%), Gaps = 18/179 (10%)

Query: 271 HMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGLK-NKCD--LCSKEFSRKSYLTE 324
              L    K   C    C   ++    L  H+  H G K   C    C K F+   +LT 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 325 HMKLHQGIKN-KCD--LCSKEFSHKSNLTKHMNLHQGIR---YKCDL--CSKEFSWKGHL 376
           H   H G KN  CD   C   F+ K+N+ KH N    I+   Y C    C K F     L
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122

Query: 377 TEHRKLHQDIKN-KC--DLCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
             H+  H      +C  + C K FS    L  H K+H G    K   CS      +   
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 83.8 bits (208), Expect = 4e-19
 Identities = 39/147 (26%), Positives = 56/147 (38%), Gaps = 27/147 (18%)

Query: 157 YKCQE--------------KHMKLHQGVR-YKCD--LCSKKFSTKSYLTAHMKLHQGLKN 199
           + C+E              +H   H G + + CD   C  +F+TK+ +  H      +K 
Sbjct: 43  FPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKI 102

Query: 200 ---KCDL--CSKEFSSKSYLTEHMKLHQGIKN-KC--DLCSKEFSTKSYLTEHMKLHQGI 251
               C    C K F   + L  H   H      +C  + C K FS  S L  H K+H G 
Sbjct: 103 CVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY 162

Query: 252 KN-KCDLCSKEFSTKSYLTEHMK-LHQ 276
              K D CS    T +   +H+   HQ
Sbjct: 163 PCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =   99 bits (250), Expect = 2e-25
 Identities = 47/149 (31%), Positives = 68/149 (45%), Gaps = 19/149 (12%)

Query: 254 KCDLCSKEFSTKSYLTEHMK---LHQGIKN------KCDLCSKEFSTKSYLTEHMKLHQG 304
           + D CS+EF ++  L  H+    +H   K        C    + F  +  L  HM+ H G
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

Query: 305 LK-NKCDL--CSKEFSRKSYLTEHMKLHQGIK-NKC--DLCSKEFSHKSNLTKHMN-LHQ 357
            K +KC    C K +SR   L  H++ H G K   C  + CSK FS+ S+  KH N  H 
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124

Query: 358 GIR-YKCDL--CSKEFSWKGHLTEHRKLH 383
             + Y C L  C+K ++    L +H K  
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 98.0 bits (245), Expect = 2e-24
 Identities = 46/151 (30%), Positives = 66/151 (43%), Gaps = 19/151 (12%)

Query: 227 KCDLCSKEFSTKSYLTEHMK---LHQGIKN------KCDLCSKEFSTKSYLTEHMKLHQG 277
           + D CS+EF ++  L  H+    +H   K        C    + F  +  L  HM+ H G
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

Query: 278 IK-NKCDL--CSKEFSTKSYLTEHMKLHQGLK-NKC--DLCSKEFSRKSYLTEHMK-LHQ 330
            K +KC    C K +S    L  H++ H G K   C  + CSK FS  S   +H    H 
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124

Query: 331 GIK-NKCDL--CSKEFSHKSNLTKHMNLHQG 358
             K   C L  C+K ++  S+L KH+    G
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 96.9 bits (242), Expect = 4e-24
 Identities = 45/152 (29%), Positives = 67/152 (44%), Gaps = 19/152 (12%)

Query: 172 YKCDLCSKKFSTKSYLTAHMK---LHQGLKN------KCDLCSKEFSSKSYLTEHMKLHQ 222
            + D CS++F ++  L  H+    +H   K        C    + F ++  L  HM+ H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 223 GIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIK-NKC--DLCSKEFSTKSYLTEHMK-LH 275
           G K +KC    C K +S    L  H++ H G K   C  + CSK FS  S   +H    H
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 276 QGIK-NKCDL--CSKEFSTKSYLTEHMKLHQG 304
              K   C L  C+K ++  S L +H+K   G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 92.7 bits (231), Expect = 1e-22
 Identities = 45/151 (29%), Positives = 67/151 (44%), Gaps = 19/151 (12%)

Query: 281 KCDLCSKEFSTKSYLTEHMK---LHQGLKN------KCDLCSKEFSRKSYLTEHMKLHQG 331
           + D CS+EF ++  L  H+    +H   K        C    + F  +  L  HM+ H G
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

Query: 332 IK-NKCDL--CSKEFSHKSNLTKHMNLHQGIR-YKC--DLCSKEFSWKGHLTEH-RKLHQ 384
            K +KC    C K +S   NL  H+  H G + Y C  + CSK FS      +H  + H 
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124

Query: 385 DIK-NKCDL--CSKEFSSKRILTEHMKLHQG 412
           + K   C L  C+K ++    L +H+K   G
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 50.3 bits (121), Expect = 9e-08
 Identities = 23/83 (27%), Positives = 34/83 (40%), Gaps = 12/83 (14%)

Query: 361 YKCDLCSKEFSWKGHLTEH-RKLHQDIKNK--------CDLCSKEFSSKRILTEHMKLHQ 411
            + D CS+EF  +  L  H    H   + K        C    + F ++ +L  HM+ H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 412 GIT-YKCGL--CSKEFSCKSNLT 431
           G   +KC    C K +S   NL 
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLK 86

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 92.3 bits (230), Expect = 1e-22
 Identities = 30/143 (20%), Positives = 47/143 (32%), Gaps = 17/143 (11%)

Query: 258 CSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK---------- 306
                           + +         C + FST   L  H+ +               
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 307 NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSHKSNLTKHMNLHQGIR-YK 362
            +C    K F  K  L  H+++H G K   C    C K F+   NL  H   H G + +K
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 363 CDL--CSKEFSWKGHLTEHRKLH 383
           C+   C + F+      +H  +H
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVH 145

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 84.6 bits (210), Expect = 1e-19
 Identities = 33/134 (24%), Positives = 50/134 (37%), Gaps = 17/134 (12%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK----------NKCDLCSKEFSSK 211
              + +         C + FST   L  H+ +                +C    K F +K
Sbjct: 16  CKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAK 75

Query: 212 SYLTEHMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCDL--CSKEFSTK 265
             L  H+++H G K   C    C K F+    L  H + H G K  KC+   C + F+  
Sbjct: 76  YKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANS 135

Query: 266 SYLTEHMKLHQGIK 279
           S   +HM +H   K
Sbjct: 136 SDRKKHMHVHTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 82.3 bits (204), Expect = 6e-19
 Identities = 28/145 (19%), Positives = 48/145 (33%), Gaps = 17/145 (11%)

Query: 285 CSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK---------- 333
                           + +         C + FS    L  H+ +               
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 334 NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL--CSKEFSWKGHLTEHRKLHQDIK-NK 389
            +C    K F  K  L  H+ +H G + + C    C K F+   +L  H++ H   K  K
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 390 CDL--CSKEFSSKRILTEHMKLHQG 412
           C+   C + F++     +HM +H  
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTS 147

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 75.0 bits (185), Expect = 2e-16
 Identities = 26/137 (18%), Positives = 40/137 (29%), Gaps = 17/137 (12%)

Query: 312 CSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQG----------IR 360
                           + +         C + FS    L  H+ +               
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL--CSKEFSSKRILTEHMKLHQGIT-YK 416
            +C    K F  K  L  H ++H   K   C    C K F+    L  H + H G   +K
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 417 CGL--CSKEFSCKSNLT 431
           C    C + F+  S+  
Sbjct: 123 CEFEGCDRRFANSSDRK 139

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 90.7 bits (226), Expect = 2e-22
 Identities = 36/112 (32%), Positives = 52/112 (46%), Gaps = 9/112 (8%)

Query: 227 KCD--LCSKEFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGIK-N 280
            C    C+K +   S+L  H + H G K  +CD   C + FS    L  H + H G+K  
Sbjct: 8   MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDL--CSKEFSRKSYLTEHMKLH 329
           +C  C ++FS   +L  H + H G K   C    C K+F+R   L  H  +H
Sbjct: 68  QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 87.6 bits (218), Expect = 4e-21
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 9/112 (8%)

Query: 308 KCD--LCSKEFSRKSYLTEHMKLHQGIKN-KCDL--CSKEFSHKSNLTKHMNLHQGIR-Y 361
            C    C+K + + S+L  H + H G K  +CD   C + FS    L +H   H G++ +
Sbjct: 8   MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67

Query: 362 KCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL--CSKEFSSKRILTEHMKLH 410
           +C  C ++FS   HL  H + H   K   C    C K+F+    L  H  +H
Sbjct: 68  QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 76.8 bits (190), Expect = 2e-17
 Identities = 31/106 (29%), Positives = 47/106 (44%), Gaps = 9/106 (8%)

Query: 335 KCD--LCSKEFSHKSNLTKHMNLHQGIR-YKCDL--CSKEFSWKGHLTEHRKLHQDIK-N 388
            C    C+K +   S+L  H   H G + Y+CD   C + FS    L  H++ H  +K  
Sbjct: 8   MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67

Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKCGL--CSKEFSCKSNLT 431
           +C  C ++FS    L  H + H G   + C    C K+F+    L 
Sbjct: 68  QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELV 113

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 76.4 bits (189), Expect = 3e-17
 Identities = 31/113 (27%), Positives = 47/113 (41%), Gaps = 21/113 (18%)

Query: 157 YKCQE--------------KHMKLHQGVR-YKCDL--CSKKFSTKSYLTAHMKLHQGLK- 198
           + C                 H + H G + Y+CD   C ++FS    L  H + H G+K 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 199 NKCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLH 248
            +C  C ++FS   +L  H + H G K   C    C K+F+    L  H  +H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 89.1 bits (222), Expect = 1e-21
 Identities = 36/105 (34%), Positives = 50/105 (47%), Gaps = 6/105 (5%)

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKL---HQGIKN-K 335
           +C  C K+F +K YL  H + H G K  +C  C K + RK  L EH      ++  +   
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68

Query: 336 CDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEH 379
           C +C + F  +  L  HM  H G   YKC  CS++F  K  L  H
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 87.9 bits (219), Expect = 2e-21
 Identities = 40/115 (34%), Positives = 53/115 (46%), Gaps = 7/115 (6%)

Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKL---HQGIKN- 226
            +C  C KKF +K YL  H + H G K  +C  C K +  K  L EH      ++  +  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHM-KLHQGIK 279
            C +C + F  +  L  HM  H G    KC  CS++F  K  L  HM KLH G  
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 82.6 bits (205), Expect = 2e-19
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHM---NLHQGIR-YK 362
           +C  C K+F  K YL  H + H G K  +C  C K +  K NL +H     +++  + + 
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68

Query: 363 CDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHM-KLHQG 412
           C +C + F  +  L  H   H      KC  CS++F  K+ L  HM KLH G
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 54.8 bits (133), Expect = 1e-09
 Identities = 20/76 (26%), Positives = 31/76 (40%), Gaps = 5/76 (6%)

Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGIT----Y 415
            +C  C K+F  K +L  H + H   K  +C  C K +  K  L EH   +        +
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 416 KCGLCSKEFSCKSNLT 431
            C +C + F  +  L 
Sbjct: 68  TCSVCQETFRRRMELR 83

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 84.4 bits (210), Expect = 3e-20
 Identities = 30/100 (30%), Positives = 50/100 (50%), Gaps = 6/100 (6%)

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDL 338
            C  C K F+ KS    HM +H GL+   C +C K+F  K +L  HMK+H GIK  +C++
Sbjct: 12  PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70

Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLT 377
           C+K F  + +  +H+      + Y+     +  +     +
Sbjct: 71  CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 75.9 bits (188), Expect = 4e-17
 Identities = 32/100 (32%), Positives = 51/100 (51%), Gaps = 6/100 (6%)

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDL 392
            C  C K F+HKS   +HM++H G+R Y C +C K+F  K HL  H K+H  IK  +C++
Sbjct: 12  PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70

Query: 393 CSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNLT 431
           C+K F  +     H+       +Y+     +  +  S  +
Sbjct: 71  CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 74.8 bits (185), Expect = 1e-16
 Identities = 30/100 (30%), Positives = 49/100 (49%), Gaps = 6/100 (6%)

Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDL 257
            C  C K F+ KS    HM +H G++   C +C K+F  K +L  HMK+H GIK  +C++
Sbjct: 12  PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70

Query: 258 CSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLT 296
           C+K F  +     H+      K+ +     +  +  S  +
Sbjct: 71  CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 63.6 bits (156), Expect = 7e-13
 Identities = 29/100 (29%), Positives = 48/100 (48%), Gaps = 16/100 (16%)

Query: 157 YKCQ-----------EKHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDL 203
           Y CQ           ++HM +H G+R Y C +C KKF  K +L  HMK+H G+K  +C++
Sbjct: 11  YPCQCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70

Query: 204 CSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLT 242
           C+K F  +     H+      K+ +     +  +  S  +
Sbjct: 71  CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 83.6 bits (208), Expect = 6e-20
 Identities = 27/103 (26%), Positives = 38/103 (36%), Gaps = 4/103 (3%)

Query: 265 KSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYL 322
            S  +      +  K   C  C + F+    L  H + H   +   CD+C K F R+ +L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 323 TEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
            +H  +H   K  KC  C K F     L  H  LH        
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 77.5 bits (192), Expect = 9e-18
 Identities = 26/99 (26%), Positives = 37/99 (37%), Gaps = 3/99 (3%)

Query: 184 KSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYL 241
            S  +      +  K   C  C + F+    L  H + H   +   CD+C K F  + +L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 242 TEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 279
            +H  +H   K  KC  C K F     L  H  LH    
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 77.1 bits (191), Expect = 1e-17
 Identities = 32/103 (31%), Positives = 41/103 (39%), Gaps = 4/103 (3%)

Query: 319 KSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHL 376
            S  +      +  K   C  C + F+   NL  H   H   R Y CD+C K F  + HL
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 377 TEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
            +HR +H   K  KC  C K F   R L  H  LH    +   
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 74.8 bits (185), Expect = 8e-17
 Identities = 24/94 (25%), Positives = 36/94 (38%), Gaps = 3/94 (3%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMK 219
                 +  + + C  C + F+    L  H + H   +   CD+C K F  + +L +H  
Sbjct: 7   GGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRY 66

Query: 220 LHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK 252
           +H   K  KC  C K F     L  H  LH    
Sbjct: 67  IHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 68.2 bits (168), Expect = 1e-14
 Identities = 22/89 (24%), Positives = 36/89 (40%), Gaps = 3/89 (3%)

Query: 346 KSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRIL 403
            S  +      +  + + C  C + F+   +L  H + H D +   CD+C K F  +  L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 404 TEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
            +H  +H     +KC  C K F     L 
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLA 90

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 84.1 bits (209), Expect = 6e-20
 Identities = 35/114 (30%), Positives = 52/114 (45%), Gaps = 10/114 (8%)

Query: 254 KCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK-NKC 309
            C    C+K F   S + +H+  H G + + C  C K F   S L  H  +H G K  +C
Sbjct: 7   ACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65

Query: 310 DL--CSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSHKSNLTKHMNLHQG 358
               C K FS    L  H+++H G +   C    C+K+F+  +NL  H+  H  
Sbjct: 66  TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 82.9 bits (206), Expect = 1e-19
 Identities = 35/116 (30%), Positives = 53/116 (45%), Gaps = 10/116 (8%)

Query: 227 KCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIK-NKC 282
            C    C+K F   S + +H+  H G + + C  C K F   S L  H  +H G K  +C
Sbjct: 7   ACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65

Query: 283 DL--CSKEFSTKSYLTEHMKLHQGLK-NKCDL--CSKEFSRKSYLTEHMKLHQGIK 333
               C K FS    L  H+++H G +   C    C+K+F++ + L  H+  H   K
Sbjct: 66  TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 76.8 bits (190), Expect = 2e-17
 Identities = 32/114 (28%), Positives = 51/114 (44%), Gaps = 10/114 (8%)

Query: 308 KCDL--CSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
            C    C+K F   S + +H+  H G + + C  C K F   S L +H  +H G + ++C
Sbjct: 7   ACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65

Query: 364 DL--CSKEFSWKGHLTEHRKLHQDIK-NKCDL--CSKEFSSKRILTEHMKLHQG 412
               C K FS   +L  H ++H   +   C    C+K+F+    L  H+  H  
Sbjct: 66  TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 71.0 bits (175), Expect = 2e-15
 Identities = 32/98 (32%), Positives = 45/98 (45%), Gaps = 8/98 (8%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDL--CSKEFSSKSYLTEH 217
           KH+  H G R + C  C K F   S L  H  +H G K  +C    C K FS    L  H
Sbjct: 25  KHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH 83

Query: 218 MKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIK 252
           +++H G +   C    C+K+F+  + L  H+  H   K
Sbjct: 84  VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 55.6 bits (135), Expect = 7e-10
 Identities = 21/76 (27%), Positives = 28/76 (36%), Gaps = 5/76 (6%)

Query: 361 YKCDL--CSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQG-ITYKC 417
             C    C+K F     + +H   H    + C  C K F     L  H  +H G   ++C
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65

Query: 418 GL--CSKEFSCKSNLT 431
               C K FS   NL 
Sbjct: 66  TFEGCGKRFSLDFNLR 81

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 81.3 bits (202), Expect = 3e-19
 Identities = 30/78 (38%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL 365
           KC++C K FSRK  L  HM+ H G+K  KC  C    +  S+L KH+ +H   R +KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

Query: 366 CSKEFSWKGHLTEHRKLH 383
           C         LT H + H
Sbjct: 70  CPYASRNSSQLTVHLRSH 87

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 77.8 bits (193), Expect = 5e-18
 Identities = 29/83 (34%), Positives = 43/83 (51%), Gaps = 2/83 (2%)

Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCD 229
           +KC++C K FS K  L  HM+ H G+K  KC  C    +  S L +H+++H   +  KC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 230 LCSKEFSTKSYLTEHMKLHQGIK 252
           +C       S LT H++ H G  
Sbjct: 69  ICPYASRNSSQLTVHLRSHTGDS 91

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 75.9 bits (188), Expect = 2e-17
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDL 311
           KC++C K FS K  L  HM+ H G+K  KC  C    +  S L +H+++H   +  KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

Query: 312 CSKEFSRKSYLTEHMKLHQGIK 333
           C       S LT H++ H G  
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDS 91

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 74.8 bits (185), Expect = 6e-17
 Identities = 29/87 (33%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL 392
           KC++C K FS K  L  HM  H G++ YKC  C    +    L +H ++H D +  KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

Query: 393 CSKEFSSKRILTEHMKLHQG-ITYKCG 418
           C     +   LT H++ H G      G
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDSGPSSG 96

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 63.6 bits (156), Expect = 6e-13
 Identities = 23/73 (31%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQGIT-YKCG 418
           +KC++C K FS K  L  H + H  +K  KC  C    +    L +H+++H     +KC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 419 LCSKEFSCKSNLT 431
           +C       S LT
Sbjct: 69  ICPYASRNSSQLT 81

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 79.8 bits (198), Expect = 9e-19
 Identities = 20/75 (26%), Positives = 35/75 (46%), Gaps = 1/75 (1%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLC 366
           +C +C + FSR  +LT H++ H G K   CD+C ++F+      +H ++   +    D  
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64

Query: 367 SKEFSWKGHLTEHRK 381
            +  S   HL     
Sbjct: 65  EELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 73.3 bits (181), Expect = 2e-16
 Identities = 19/74 (25%), Positives = 34/74 (45%), Gaps = 1/74 (1%)

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLC 339
           +C +C + FS   +LT H++ H G K   CD+C ++F+R      H  +   +    D  
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64

Query: 340 SKEFSHKSNLTKHM 353
            +  S   +L   +
Sbjct: 65  EELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 72.1 bits (178), Expect = 4e-16
 Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 254 KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLC 312
           +C +C + FS   +LT H++ H G K   CD+C ++F+       H  +   L    D  
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64

Query: 313 SKEFSRKSYLTEHMK 327
            +  S+  +L   + 
Sbjct: 65  EELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 72.1 bits (178), Expect = 5e-16
 Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 1/76 (1%)

Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDL 230
           ++C +C + FS   +LT H++ H G K   CD+C ++F+       H  +   +    D 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63

Query: 231 CSKEFSTKSYLTEHMK 246
             +  S   +L   + 
Sbjct: 64  VEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 71.0 bits (175), Expect = 1e-15
 Identities = 18/75 (24%), Positives = 33/75 (44%), Gaps = 1/75 (1%)

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLC 393
           +C +C + FS   +LT H+  H G + + CD+C ++F+       HR +   +    D  
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64

Query: 394 SKEFSSKRILTEHMK 408
            +  S    L   + 
Sbjct: 65  EELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 17/72 (23%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGITYKCGL 419
           ++C +C + FS   HLT H + H   K   CD+C ++F+       H  +   +      
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63

Query: 420 CSKEFSCKSNLT 431
             +  S   +L 
Sbjct: 64  VEELLSKNYHLE 75

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 79.4 bits (197), Expect = 1e-18
 Identities = 26/80 (32%), Positives = 44/80 (55%), Gaps = 4/80 (5%)

Query: 308 KCDL--CSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
            C +  C + FS+   LT H+++H G K  +C +C + FS   +LT H+  H G + + C
Sbjct: 6   ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65

Query: 364 DLCSKEFSWKGHLTEHRKLH 383
           D+C ++F+       H K+H
Sbjct: 66  DICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 79.0 bits (196), Expect = 1e-18
 Identities = 29/86 (33%), Positives = 47/86 (54%), Gaps = 4/86 (4%)

Query: 172 YKCDL--CSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIK-NK 227
           Y C +  C ++FS    LT H+++H G K  +C +C + FS   +LT H++ H G K   
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 228 CDLCSKEFSTKSYLTEHMKLHQGIKN 253
           CD+C ++F+       H K+H   K+
Sbjct: 65  CDICGRKFARSDERKRHTKIHLRQKD 90

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 78.7 bits (195), Expect = 2e-18
 Identities = 27/82 (32%), Positives = 44/82 (53%), Gaps = 4/82 (4%)

Query: 281 KCDL--CSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKC 336
            C +  C + FS    LT H+++H G K  +C +C + FSR  +LT H++ H G K   C
Sbjct: 6   ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65

Query: 337 DLCSKEFSHKSNLTKHMNLHQG 358
           D+C ++F+      +H  +H  
Sbjct: 66  DICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 78.3 bits (194), Expect = 3e-18
 Identities = 29/85 (34%), Positives = 46/85 (54%), Gaps = 4/85 (4%)

Query: 254 KCDL--CSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLK-NKC 309
            C +  C + FS    LT H+++H G K  +C +C + FS   +LT H++ H G K   C
Sbjct: 6   ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65

Query: 310 DLCSKEFSRKSYLTEHMKLHQGIKN 334
           D+C ++F+R      H K+H   K+
Sbjct: 66  DICGRKFARSDERKRHTKIHLRQKD 90

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 71.3 bits (176), Expect = 9e-16
 Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 4/82 (4%)

Query: 335 KCDL--CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKC 390
            C +  C + FS   +LT+H+ +H G + ++C +C + FS   HLT H + H   K   C
Sbjct: 6   ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65

Query: 391 DLCSKEFSSKRILTEHMKLHQG 412
           D+C ++F+       H K+H  
Sbjct: 66  DICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 21/67 (31%), Positives = 39/67 (58%), Gaps = 2/67 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMK 219
           +H+++H G + ++C +C + FS   +LT H++ H G K   CD+C ++F+       H K
Sbjct: 24  RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTK 83

Query: 220 LHQGIKN 226
           +H   K+
Sbjct: 84  IHLRQKD 90

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 13/56 (23%), Positives = 25/56 (44%), Gaps = 13/56 (23%)

Query: 157 YKCQE------------KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN 199
           ++C+              H++ H G + + CD+C +KF+       H K+H   K+
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKD 90

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 38.6 bits (91), Expect = 3e-04
 Identities = 15/46 (32%), Positives = 25/46 (54%), Gaps = 3/46 (6%)

Query: 389 KCDL--CSKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
            C +  C + FS    LT H+++H G   ++C +C + FS   +LT
Sbjct: 6   ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLT 51

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 76.5 bits (189), Expect = 2e-17
 Identities = 29/101 (28%), Positives = 48/101 (47%), Gaps = 7/101 (6%)

Query: 289 FSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSH 345
             +     E  ++H         C+K +++ S+L  H++ H G K  KC    C   F+ 
Sbjct: 3   SGSSGPDLEKRRIHYCDY---PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 346 KSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQD 385
              LT+H   H G + ++C +C++ FS   HL  H K HQ+
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 71.5 bits (176), Expect = 1e-15
 Identities = 30/100 (30%), Positives = 46/100 (46%), Gaps = 7/100 (7%)

Query: 262 FSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDL--CSKEFSR 318
             +     E  ++H         C+K ++  S+L  H++ H G K  KC    C   F+R
Sbjct: 3   SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 319 KSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQ 357
              LT H + H G K  +C +C++ FS   +L  HM  HQ
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 67.7 bits (166), Expect = 2e-14
 Identities = 31/100 (31%), Positives = 46/100 (46%), Gaps = 7/100 (7%)

Query: 208 FSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDL--CSKEFST 264
             S     E  ++H         C+K ++  S+L  H++ H G K  KC    C   F+ 
Sbjct: 3   SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 265 KSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQ 303
              LT H + H G K  +C +C++ FS   +L  HMK HQ
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 66.9 bits (164), Expect = 4e-14
 Identities = 29/101 (28%), Positives = 45/101 (44%), Gaps = 7/101 (6%)

Query: 180 KFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFS 236
              +        ++H         C+K ++  S+L  H++ H G K  KC    C   F+
Sbjct: 2   SSGSSGPDLEKRRIHYCDY---PGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

Query: 237 TKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQ 276
               LT H + H G K  +C +C++ FS   +L  HMK HQ
Sbjct: 59  RSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 66.5 bits (163), Expect = 5e-14
 Identities = 29/100 (29%), Positives = 43/100 (43%), Gaps = 7/100 (7%)

Query: 316 FSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL--CSKEFSW 372
                   E  ++H         C+K ++  S+L  H+  H G + YKC    C   F+ 
Sbjct: 3   SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 373 KGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQ 411
              LT H + H   K  +C +C++ FS    L  HMK HQ
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 64.6 bits (158), Expect = 3e-13
 Identities = 30/94 (31%), Positives = 46/94 (48%), Gaps = 7/94 (7%)

Query: 160 QEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDL--CSKEFSSKSYLTE 216
             +  ++H         C+K ++  S+L AH++ H G K  KC    C   F+    LT 
Sbjct: 9   DLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTR 65

Query: 217 HMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQ 249
           H + H G K  +C +C++ FS   +L  HMK HQ
Sbjct: 66  HYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 75.2 bits (186), Expect = 3e-17
 Identities = 28/78 (35%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL 365
            C +C K F R S L+ H+ +H   +   C  C K F  KS++ KH  +H G + +KC +
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 366 CSKEFSWKGHLTEHRKLH 383
           C K FS   +L  H + H
Sbjct: 63  CGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 72.8 bits (180), Expect = 2e-16
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDL 338
            C +C K F   S L+ H+ +H   +   C  C K F +KS + +H  +H G K +KC +
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 339 CSKEFSHKSNLTKHMNLHQG 358
           C K FS  SNL  H   H G
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 71.3 bits (176), Expect = 7e-16
 Identities = 29/81 (35%), Positives = 41/81 (50%), Gaps = 2/81 (2%)

Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCD 229
           + C +C K F   S L+ H+ +H   +   C  C K F  KS + +H  +H G K +KC 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 230 LCSKEFSTKSYLTEHMKLHQG 250
           +C K FS  S L  H + H G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 68.2 bits (168), Expect = 8e-15
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDL 257
            C +C K F   S L+ H+ +H   +   C  C K F  KS + +H  +H G K +KC +
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 258 CSKEFSTKSYLTEHMKLHQG 277
           C K FS  S L  H + H G
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 67.8 bits (167), Expect = 1e-14
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDL 284
            C +C K F   S L+ H+ +H   +   C  C K F  KS + +H  +H G K +KC +
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 285 CSKEFSTKSYLTEHMKLHQG 304
           C K FS  S L  H + H G
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 66.3 bits (163), Expect = 4e-14
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 2/80 (2%)

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL 392
            C +C K F   S L+ H+ +H   R Y C  C K F  K  + +H  +H   K +KC +
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 393 CSKEFSSKRILTEHMKLHQG 412
           C K FS    L  H + H G
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 60.5 bits (148), Expect = 5e-12
 Identities = 25/73 (34%), Positives = 35/73 (47%), Gaps = 2/73 (2%)

Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQG-ITYKCG 418
           + C +C K F     L+ H  +H D +   C  C K F  K  + +H  +H G   +KC 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 419 LCSKEFSCKSNLT 431
           +C K FS  SNL 
Sbjct: 62  VCGKAFSQSSNLI 74

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 56.3 bits (137), Expect = 1e-10
 Identities = 26/81 (32%), Positives = 36/81 (44%), Gaps = 14/81 (17%)

Query: 157 YKCQE------------KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCD 202
           + C+              H+ +H   R Y C  C K+F  KS +  H  +H G K +KC 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 203 LCSKEFSSKSYLTEHMKLHQG 223
           +C K FS  S L  H + H G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 75.6 bits (187), Expect = 3e-17
 Identities = 26/78 (33%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR---YKC 363
            C++C K F    +L  H   H G K   C +C   F  K  ++ H+  H G     Y C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 364 DLCSKEFSWKGHLTEHRK 381
             C K FS   HL  H K
Sbjct: 69  QSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 73.7 bits (182), Expect = 2e-16
 Identities = 25/77 (32%), Positives = 35/77 (45%), Gaps = 4/77 (5%)

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNK---C 336
            C++C K F    +L  H   H G K   C +C   F RK  ++ H++ H G   K   C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 337 DLCSKEFSHKSNLTKHM 353
             C K FS   +L  H+
Sbjct: 69  QSCGKGFSRPDHLNGHI 85

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 72.9 bits (180), Expect = 3e-16
 Identities = 25/79 (31%), Positives = 35/79 (44%), Gaps = 4/79 (5%)

Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIKNK--- 227
             C++C K F    +L  H   H G K   C +C   F  K  ++ H++ H G   K   
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 228 CDLCSKEFSTKSYLTEHMK 246
           C  C K FS   +L  H+K
Sbjct: 68  CQSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 69.8 bits (172), Expect = 3e-15
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)

Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKNK---C 255
            C++C K F    +L  H   H G K   C +C   F  K  ++ H++ H G   K   C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 256 DLCSKEFSTKSYLTEHMK 273
             C K FS   +L  H+K
Sbjct: 69  QSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 69.4 bits (171), Expect = 5e-15
 Identities = 25/78 (32%), Positives = 35/78 (44%), Gaps = 4/78 (5%)

Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKNK---C 282
            C++C K F    +L  H   H G K   C +C   F  K  ++ H++ H G   K   C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 283 DLCSKEFSTKSYLTEHMK 300
             C K FS   +L  H+K
Sbjct: 69  QSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 65.2 bits (160), Expect = 1e-13
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKNK---C 390
            C++C K F    +L +H   H G + Y C +C   F  K  ++ H + H     K   C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 391 DLCSKEFSSKRILTEHMK 408
             C K FS    L  H+K
Sbjct: 69  QSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 62.1 bits (152), Expect = 2e-12
 Identities = 23/75 (30%), Positives = 32/75 (42%), Gaps = 4/75 (5%)

Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGIT---YK 416
             C++C K F    HL  H+  H   K   C +C   F  K  ++ H++ H G     Y 
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 417 CGLCSKEFSCKSNLT 431
           C  C K FS   +L 
Sbjct: 68  CQSCGKGFSRPDHLN 82

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 21/79 (26%), Positives = 32/79 (40%), Gaps = 16/79 (20%)

Query: 157 YKCQE------------KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKNK--- 200
             C+             +H   H G + Y C +C  +F  K  ++ H++ H G   K   
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 201 CDLCSKEFSSKSYLTEHMK 219
           C  C K FS   +L  H+K
Sbjct: 68  CQSCGKGFSRPDHLNGHIK 86

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 67.2 bits (165), Expect = 2e-14
 Identities = 27/80 (33%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSHKSNLTKHMNLHQGIR-YKC 363
               C K +++ S+L  H++ H G K   CD   C  +F+    LT+H   H G R ++C
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68

Query: 364 DLCSKEFSWKGHLTEHRKLH 383
             C + FS   HL  H K H
Sbjct: 69  QKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 65.6 bits (161), Expect = 9e-14
 Identities = 29/91 (31%), Positives = 41/91 (45%), Gaps = 7/91 (7%)

Query: 162 KHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDL--CSKEFSSKSYLTEHM 218
           K    H         C K ++  S+L AH++ H G K   CD   C  +F+    LT H 
Sbjct: 1   KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY 57

Query: 219 KLHQGIKN-KCDLCSKEFSTKSYLTEHMKLH 248
           + H G +  +C  C + FS   +L  HMK H
Sbjct: 58  RKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 63.7 bits (156), Expect = 5e-13
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 275 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDL--CSKEFSRKSYLTEHMKLHQ 330
                      C K ++  S+L  H++ H G K   CD   C  +F+R   LT H + H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 331 GIKN-KCDLCSKEFSHKSNLTKHMNLH 356
           G +  +C  C + FS   +L  HM  H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 60.2 bits (147), Expect = 8e-12
 Identities = 26/87 (29%), Positives = 38/87 (43%), Gaps = 5/87 (5%)

Query: 221 HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQ 276
                      C K ++  S+L  H++ H G K   CD   C  +F+    LT H + H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 277 GIKN-KCDLCSKEFSTKSYLTEHMKLH 302
           G +  +C  C + FS   +L  HMK H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 26/80 (32%), Positives = 38/80 (47%), Gaps = 4/80 (5%)

Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFSTKSYLTEHMKLHQGIKN-KC 255
               C K ++  S+L  H++ H G K   CD   C  +F+    LT H + H G +  +C
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68

Query: 256 DLCSKEFSTKSYLTEHMKLH 275
             C + FS   +L  HMK H
Sbjct: 69  QKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 21/107 (19%), Positives = 34/107 (31%), Gaps = 30/107 (28%)

Query: 329 HQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDL--CSKEFSWKGHLTEHRKLHQ 384
                      C K ++  S+L  H+  H G + Y CD   C  +F+    LT H + H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 385 DIKNKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKEFSCKSNLT 431
             +                           ++C  C + FS   +L 
Sbjct: 62  GHRP--------------------------FQCQKCDRAFSRSDHLA 82

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 65.9 bits (162), Expect = 4e-14
 Identities = 20/66 (30%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 320 SYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLT 377
            +   H  +    K  KCD C   F +K NL  H  +H G + Y+C++C  +F+   +L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 378 EHRKLH 383
            H ++H
Sbjct: 63  THTRIH 68

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 65.2 bits (160), Expect = 1e-13
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 293 SYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLT 350
            +   H  +    K  KCD C   F  K  L  H  +H G K  +C++C  +F+  +NL 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 351 KHMNLHQG 358
            H  +H G
Sbjct: 63  THTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 63.6 bits (156), Expect = 3e-13
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 266 SYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLT 323
            +   H  +    K  KCD C   F  K  L  H  +H G K  +C++C  +F+R + L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 324 EHMKLHQGIK 333
            H ++H G K
Sbjct: 63  THTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 61.3 bits (150), Expect = 2e-12
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 212 SYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLT 269
            +   H  +    K  KCD C   F  K  L  H  +H G K  +C++C  +F+  + L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 270 EHMKLHQGIK 279
            H ++H G K
Sbjct: 63  THTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 60.9 bits (149), Expect = 3e-12
 Identities = 21/70 (30%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 185 SYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLT 242
            +   H  +    K  KCD C   F  K  L  H  +H G K  +C++C  +F+  + L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 243 EHMKLHQGIK 252
            H ++H G K
Sbjct: 63  THTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 57.8 bits (141), Expect = 3e-11
 Identities = 21/66 (31%), Positives = 33/66 (50%), Gaps = 2/66 (3%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMK 219
            H  +    + YKCD C   F  K  L +H  +H G K  +C++C  +F+  + L  H +
Sbjct: 7   HHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

Query: 220 LHQGIK 225
           +H G K
Sbjct: 67  IHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 56.3 bits (137), Expect = 1e-10
 Identities = 20/68 (29%), Positives = 35/68 (51%), Gaps = 2/68 (2%)

Query: 347 SNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILT 404
            +   H ++    + YKCD C   F +KG+L  H+ +H   K  +C++C  +F+    L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 405 EHMKLHQG 412
            H ++H G
Sbjct: 63  THTRIHSG 70

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 64.1 bits (157), Expect = 3e-13
 Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 7/83 (8%)

Query: 295 LTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKN-----KCDLCSKEFSHKSN 348
                + H G K   C  C K F +K  L  H K +           C  C K F+ ++ 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 349 LTKHMNLHQGIR-YKCDLCSKEF 370
           + +H +   G    + +      
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 18/83 (21%), Positives = 26/83 (31%), Gaps = 7/83 (8%)

Query: 268 LTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLKN-----KCDLCSKEFSRKSY 321
                + H G K   C  C K F  K  L  H K +           C  C K F+R++ 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 322 LTEHMKLHQGIKN-KCDLCSKEF 343
           +  H     G    + +      
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 57.5 bits (140), Expect = 6e-11
 Identities = 17/81 (20%), Positives = 26/81 (32%), Gaps = 7/81 (8%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-----KCDLCSKEFSSKSYLT 215
              + H G + Y C  C K F  K  L  H K +           C  C K F+ ++ + 
Sbjct: 5   SSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMA 64

Query: 216 EHMKLHQGIKN-KCDLCSKEF 235
            H     G    + +      
Sbjct: 65  RHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 57.2 bits (139), Expect = 8e-11
 Identities = 17/83 (20%), Positives = 25/83 (30%), Gaps = 7/83 (8%)

Query: 214 LTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKN-----KCDLCSKEFSTKSY 267
                + H G K   C  C K F  K  L  H K +           C  C K F+ ++ 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 268 LTEHMKLHQGIKN-KCDLCSKEF 289
           +  H     G    + +      
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 55.2 bits (134), Expect = 4e-10
 Identities = 18/84 (21%), Positives = 25/84 (29%), Gaps = 7/84 (8%)

Query: 348 NLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-----KCDLCSKEFSSKR 401
           +       H G + Y C  C K F  K  L  H K + D         C  C K F+ + 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 402 ILTEHMKLHQG-ITYKCGLCSKEF 424
            +  H     G    +        
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 6/64 (9%)

Query: 374 GHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGIT-----YKCGLCSKEFSCK 427
           G      + H   K   C  C K F  K++L  H K +         + C  C K F+ +
Sbjct: 1   GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRR 60

Query: 428 SNLT 431
           + + 
Sbjct: 61  NTMA 64

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 62.8 bits (154), Expect = 6e-13
 Identities = 25/67 (37%), Positives = 33/67 (49%), Gaps = 2/67 (2%)

Query: 319 KSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHL 376
                      +  +  KCD C K FSH S+L+KH   H G + YKCD C K F  + HL
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 377 TEHRKLH 383
             H ++H
Sbjct: 63  IGHHRVH 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.0 bits (144), Expect = 1e-11
 Identities = 24/69 (34%), Positives = 32/69 (46%), Gaps = 2/69 (2%)

Query: 292 KSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNL 349
                      +  +  KCD C K FS  S L++H + H G K  KCD C K F  +S+L
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 350 TKHMNLHQG 358
             H  +H G
Sbjct: 63  IGHHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 58.2 bits (142), Expect = 3e-11
 Identities = 24/71 (33%), Positives = 34/71 (47%), Gaps = 2/71 (2%)

Query: 265 KSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYL 322
                      +  +  KCD C K FS  S L++H + H G K  KCD C K F ++S+L
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 323 TEHMKLHQGIK 333
             H ++H G  
Sbjct: 63  IGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.9 bits (136), Expect = 1e-10
 Identities = 25/72 (34%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 210 SKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSY 267
           S           +  +  KCD C K FS  S L++H + H G K  KCD C K F  +S+
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 268 LTEHMKLHQGIK 279
           L  H ++H G  
Sbjct: 62  LIGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.1 bits (134), Expect = 3e-10
 Identities = 24/70 (34%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 345 HKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRI 402
              +  +     +  R YKCD C K FS    L++HR+ H   K  KCD C K F  +  
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 403 LTEHMKLHQG 412
           L  H ++H G
Sbjct: 62  LIGHHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.4 bits (132), Expect = 6e-10
 Identities = 26/66 (39%), Positives = 34/66 (51%), Gaps = 2/66 (3%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMK 219
           +     +  R YKCD C K FS  S L+ H + H G K  KCD C K F  +S+L  H +
Sbjct: 8   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR 67

Query: 220 LHQGIK 225
           +H G  
Sbjct: 68  VHTGSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.8 bits (151), Expect = 2e-12
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 5/69 (7%)

Query: 295 LTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNK---CDLCSKEFSHKSNLT 350
                + H G K  +C +C   F++   +  H+            C  C    + KS+L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 351 KHM-NLHQG 358
            H+   H  
Sbjct: 63  VHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.8 bits (151), Expect = 2e-12
 Identities = 15/67 (22%), Positives = 23/67 (34%), Gaps = 5/67 (7%)

Query: 322 LTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIR---YKCDLCSKEFSWKGHLT 377
                + H G K  +C +C   F+    +  H+          + C  C    + K  L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 378 EH-RKLH 383
            H RK H
Sbjct: 63  VHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.6 bits (148), Expect = 3e-12
 Identities = 15/69 (21%), Positives = 25/69 (36%), Gaps = 5/69 (7%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKNK---CDLCSKEFSSKSYLTEH 217
              + H G + Y+C +C  +F+    +  H+            C  C    + KS L  H
Sbjct: 5   SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVH 64

Query: 218 M-KLHQGIK 225
           + K H    
Sbjct: 65  LRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.5 bits (145), Expect = 1e-11
 Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 5/71 (7%)

Query: 268 LTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLKNK---CDLCSKEFSRKSYLT 323
                + H G K  +C +C   F+    +  H+            C  C    +RKS L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 324 EHM-KLHQGIK 333
            H+ K H    
Sbjct: 63  VHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.5 bits (140), Expect = 5e-11
 Identities = 15/71 (21%), Positives = 24/71 (33%), Gaps = 5/71 (7%)

Query: 187 LTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHMKLHQGIKNK---CDLCSKEFSTKSYLT 242
             +  + H G K  +C +C   F+    +  H+            C  C    + KS L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 243 EHM-KLHQGIK 252
            H+ K H    
Sbjct: 63  VHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.1 bits (139), Expect = 6e-11
 Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 5/71 (7%)

Query: 241 LTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKNK---CDLCSKEFSTKSYLT 296
                + H G K  +C +C   F+    +  H+            C  C    + KS L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 297 EHM-KLHQGLK 306
            H+ K H    
Sbjct: 63  VHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.8 bits (138), Expect = 8e-11
 Identities = 15/71 (21%), Positives = 23/71 (32%), Gaps = 5/71 (7%)

Query: 214 LTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKNK---CDLCSKEFSTKSYLT 269
                + H G K  +C +C   F+    +  H+            C  C    + KS L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 270 EHM-KLHQGIK 279
            H+ K H    
Sbjct: 63  VHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.5 bits (132), Expect = 6e-10
 Identities = 15/70 (21%), Positives = 23/70 (32%), Gaps = 5/70 (7%)

Query: 348 NLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKNK---CDLCSKEFSSKRIL 403
           +       H G + Y+C +C   F+  G +  H             C  C    + K  L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 404 TEHM-KLHQG 412
             H+ K H  
Sbjct: 62  GVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 12/62 (19%), Positives = 21/62 (33%), Gaps = 4/62 (6%)

Query: 374 GHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGIT---YKCGLCSKEFSCKSN 429
           G      + H   K  +C +C   F+    +  H+          + C  C    + KS+
Sbjct: 1   GSSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSD 60

Query: 430 LT 431
           L 
Sbjct: 61  LG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 61.0 bits (149), Expect = 2e-12
 Identities = 20/52 (38%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQG 358
           KC  CS   S K+ L  H ++H   +  KC+ CS +    SNL+KHM    G
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 59.0 bits (144), Expect = 1e-11
 Identities = 19/56 (33%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKN 226
            KC  CS   S+K+ L  H ++H   +  KC+ CS +    S L++HMK   G  +
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 59.0 bits (144), Expect = 1e-11
 Identities = 17/50 (34%), Positives = 25/50 (50%), Gaps = 1/50 (2%)

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
           KC  CS   S K+ L  H  +H   R +KC+ CS +     +L++H K  
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 57.1 bits (139), Expect = 6e-11
 Identities = 19/55 (34%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN 334
           KC  CS   S+K+ L  H ++H   +  KC+ CS +  + S L++HMK   G  +
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 20/55 (36%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN 253
           KC  CS   SSK+ L  H ++H   +  KC+ CS +    S L++HMK   G  +
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 19/55 (34%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN 280
           KC  CS   S+K+ L  H ++H   +  KC+ CS +    S L++HMK   G  +
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.0 bits (118), Expect = 4e-08
 Identities = 18/53 (33%), Positives = 25/53 (47%), Gaps = 1/53 (1%)

Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQG 412
            KC  CS   S K  L  H ++H   +  KC+ CS +      L++HMK   G
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 17/44 (38%), Positives = 22/44 (50%), Gaps = 1/44 (2%)

Query: 389 KCDLCSKEFSSKRILTEHMKLHQGI-TYKCGLCSKEFSCKSNLT 431
           KC  CS   SSK  L  H ++H     +KC  CS +    SNL+
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLS 54

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 60.6 bits (148), Expect = 4e-12
 Identities = 23/64 (35%), Positives = 31/64 (48%), Gaps = 2/64 (3%)

Query: 322 LTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEH 379
            +    +H G K   C  C K FS  S L +H  +H G + YKC  C K FS    L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 380 RKLH 383
           +++H
Sbjct: 62  QRIH 65

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 59.8 bits (146), Expect = 6e-12
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 295 LTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKH 352
            +    +H G K   C  C K FSR S L +H ++H G K  KC  C K FS  S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 353 MNLHQG 358
             +H  
Sbjct: 62  QRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 57.9 bits (141), Expect = 3e-11
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 268 LTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEH 325
            +    +H G K   C  C K FS  S L +H ++H G K  KC  C K FS+ S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 326 MKLHQGIK 333
            ++H    
Sbjct: 62  QRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 55.9 bits (136), Expect = 1e-10
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 214 LTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEH 271
            +    +H G K   C  C K FS  S L +H ++H G K  KC  C K FS  S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 272 MKLHQGIK 279
            ++H    
Sbjct: 62  QRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 55.9 bits (136), Expect = 1e-10
 Identities = 24/66 (36%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMK 219
               +H G + Y C  C K FS  S L  H ++H G K  KC  C K FS  S L  H +
Sbjct: 4   GSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63

Query: 220 LHQGIK 225
           +H    
Sbjct: 64  IHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 21/66 (31%), Positives = 30/66 (45%), Gaps = 2/66 (3%)

Query: 349 LTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEH 406
            +    +H G + Y C  C K FS    L +H+++H   K  KC  C K FS    L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 407 MKLHQG 412
            ++H  
Sbjct: 62  QRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 21/58 (36%), Positives = 26/58 (44%), Gaps = 2/58 (3%)

Query: 376 LTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
            +    +H   K   C  C K FS   IL +H ++H G   YKC  C K FS  S L 
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLI 59

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 59.5 bits (145), Expect = 7e-12
 Identities = 18/55 (32%), Positives = 32/55 (58%), Gaps = 3/55 (5%)

Query: 335 KCDLCSKEFSHKSNLTKHM--NLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDI 386
           +C +CS+ ++H SN  +H   +  + ++ Y C  C KEF+ K ++T H K+   I
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 172 YKCDLCSKKFSTKSYLTAHM--KLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGI 224
           Y+C +CS+ ++  S    H      + +K   C  C KEF+ K  +T H+K+   I
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 308 KCDLCSKEFSRKSYLTEHM--KLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGI 359
           +C +CS+ ++  S    H      + +K   C  C KEF+ K N+T H+ +   I
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 55.6 bits (135), Expect = 2e-10
 Identities = 17/55 (30%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 281 KCDLCSKEFSTKSYLTEHM--KLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGI 332
           +C +CS+ ++  S    H      + +K   C  C KEF+RK  +T H+K+   I
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 200 KCDLCSKEFSSKSYLTEHM--KLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 251
           +C +CS+ ++  S    H      + +K   C  C KEF+ K  +T H+K+   I
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 16/55 (29%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 227 KCDLCSKEFSTKSYLTEHM--KLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGI 278
           +C +CS+ ++  S    H      + +K   C  C KEF+ K  +T H+K+   I
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 48.7 bits (117), Expect = 4e-08
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 361 YKCDLCSKEFSWKGHLTEHR--KLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQGI 413
           Y+C +CS+ ++   +   H      +++K   C  C KEF+ K  +T H+K+   I
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 40.2 bits (95), Expect = 4e-05
 Identities = 14/56 (25%), Positives = 25/56 (44%), Gaps = 15/56 (26%)

Query: 157 YKCQE------------KHM--KLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGL 197
           Y+C+             +H      + V+ Y C  C K+F+ K  +TAH+K+   +
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 59.3 bits (144), Expect = 1e-11
 Identities = 12/53 (22%), Positives = 20/53 (37%), Gaps = 4/53 (7%)

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR----YKCDLCSKEFSWKGHLTEHRKLH 383
           +C++C      K++L  H   H        + C+ C K F     +  HR   
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 58.2 bits (141), Expect = 3e-11
 Identities = 11/53 (20%), Positives = 21/53 (39%), Gaps = 4/53 (7%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLH---QGIKN-KCDLCSKEFSHKSNLTKHMNLH 356
           +C++C     +K+ L  H + H          C+ C K F    ++  H +  
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 56.3 bits (136), Expect = 1e-10
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 4/53 (7%)

Query: 227 KCDLCSKEFSTKSYLTEHMKLH---QGIKN-KCDLCSKEFSTKSYLTEHMKLH 275
           +C++C      K+ L  H + H          C+ C K F     +  H    
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 56.3 bits (136), Expect = 1e-10
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 4/53 (7%)

Query: 254 KCDLCSKEFSTKSYLTEHMKLH---QGIKN-KCDLCSKEFSTKSYLTEHMKLH 302
           +C++C      K+ L  H + H          C+ C K F     +  H    
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 55.9 bits (135), Expect = 2e-10
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 4/53 (7%)

Query: 200 KCDLCSKEFSSKSYLTEHMKLH---QGIKN-KCDLCSKEFSTKSYLTEHMKLH 248
           +C++C      K+ L  H + H          C+ C K F     +  H    
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 52.4 bits (126), Expect = 3e-09
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 4/54 (7%)

Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIKN----KCDLCSKEFSSKRILTEHMKLH 410
            +C++C      K  L  H++ H +        C+ C K F     +  H    
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 44.7 bits (106), Expect = 2e-06
 Identities = 10/47 (21%), Positives = 17/47 (36%), Gaps = 4/47 (8%)

Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT----YKCGLCSKEFSCKSNLT 431
           +C++C      K  L  H + H        + C  C K F    ++ 
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVA 55

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.6 bits (98), Expect = 2e-05
 Identities = 8/37 (21%), Positives = 13/37 (35%), Gaps = 4/37 (10%)

Query: 162 KHMKLHQGVR----YKCDLCSKKFSTKSYLTAHMKLH 194
            H + H        + C+ C K+F     + AH    
Sbjct: 25  WHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 58.0 bits (141), Expect = 4e-11
 Identities = 23/73 (31%), Positives = 28/73 (38%), Gaps = 4/73 (5%)

Query: 285 CSKEFSTKSYLTEHMKLHQGLK-NKCD--LCSKEFSRKSYLTEHMKLHQGIKN-KCDLCS 340
           C K F   + L  H   H      +C    C K FS  S L  H K+H G    K D CS
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 341 KEFSHKSNLTKHM 353
                 +   KH+
Sbjct: 69  FVGKTWTLYLKHV 81

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 56.5 bits (137), Expect = 1e-10
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 231 CSKEFSTKSYLTEHMKLHQGIK-NKCD--LCSKEFSTKSYLTEHMKLHQGIKN-KCDLCS 286
           C K F   + L  H   H      +C    C K FS  S L  H K+H G    K D CS
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 287 KEFSTKSYLTEHMK 300
               T +   +H+ 
Sbjct: 69  FVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 55.7 bits (135), Expect = 3e-10
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 204 CSKEFSSKSYLTEHMKLHQGIK-NKCD--LCSKEFSTKSYLTEHMKLHQGIKN-KCDLCS 259
           C K F   + L  H   H      +C    C K FS  S L  H K+H G    K D CS
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 260 KEFSTKSYLTEHMK 273
               T +   +H+ 
Sbjct: 69  FVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 55.3 bits (134), Expect = 4e-10
 Identities = 21/74 (28%), Positives = 27/74 (36%), Gaps = 4/74 (5%)

Query: 312 CSKEFSRKSYLTEHMKLHQGIK-NKCD--LCSKEFSHKSNLTKHMNLHQGIR-YKCDLCS 367
           C K F + + L  H   H      +C    C K FS  S L +H  +H G    K D CS
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 368 KEFSWKGHLTEHRK 381
                     +H  
Sbjct: 69  FVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.1 bits (123), Expect = 1e-08
 Identities = 21/74 (28%), Positives = 28/74 (37%), Gaps = 4/74 (5%)

Query: 339 CSKEFSHKSNLTKHMNLHQGIR-YKCD--LCSKEFSWKGHLTEHRKLHQDIKN-KCDLCS 394
           C K F   + L  H   H     Y+C    C K FS    L  H K+H      K D CS
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 395 KEFSSKRILTEHMK 408
               +  +  +H+ 
Sbjct: 69  FVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 47.2 bits (113), Expect = 2e-07
 Identities = 19/61 (31%), Positives = 26/61 (42%), Gaps = 4/61 (6%)

Query: 163 HMKLHQGVR-YKCD--LCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHM 218
           H   H     Y+C    C K+FS  S L  H K+H G    K D CS    + +   +H+
Sbjct: 22  HQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHV 81

Query: 219 K 219
            
Sbjct: 82  A 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 44.5 bits (106), Expect = 2e-06
 Identities = 21/77 (27%), Positives = 25/77 (32%), Gaps = 6/77 (7%)

Query: 361 YKCDL--CSKEFSWKGHLTEHRKLHQDIK-NKCD--LCSKEFSSKRILTEHMKLHQGIT- 414
           Y C    C K F     L  H+  H      +C    C K FS    L  H K+H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 415 YKCGLCSKEFSCKSNLT 431
            K   CS      +   
Sbjct: 62  KKDDSCSFVGKTWTLYL 78

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 57.9 bits (139), Expect = 1e-10
 Identities = 22/103 (21%), Positives = 31/103 (30%), Gaps = 8/103 (7%)

Query: 317 SRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGH 375
           S  S    +  +  G    +C  CS  +     LT HMN     R            +  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 376 LTEHRKLHQDIKN-------KCDLCSKEFSSKRILTEHMKLHQ 411
               R L +           KC  C   F S + L+ HM   +
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 57.5 bits (138), Expect = 1e-10
 Identities = 20/108 (18%), Positives = 32/108 (29%), Gaps = 8/108 (7%)

Query: 209 SSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSY 267
           SS S    +  +  G    +C  CS  + T   LT HM      ++           +  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 268 LTEHMKLHQGIKN-------KCDLCSKEFSTKSYLTEHMKLHQGLKNK 308
                 L +           KC  C   F +   L+ HM   +  +  
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV 109

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 57.5 bits (138), Expect = 1e-10
 Identities = 17/95 (17%), Positives = 29/95 (30%), Gaps = 8/95 (8%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLH 221
           +  +  G   ++C  CS  + T   LT HM      ++           +        L 
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLL 69

Query: 222 QGIKN-------KCDLCSKEFSTKSYLTEHMKLHQ 249
           +           KC  C   F +   L+ HM   +
Sbjct: 70  EMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 57.5 bits (138), Expect = 2e-10
 Identities = 18/103 (17%), Positives = 31/103 (30%), Gaps = 8/103 (7%)

Query: 182 STKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSY 240
           S+ S    +  +  G    +C  CS  + +   LT HM      ++           +  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 241 LTEHMKLHQGIKN-------KCDLCSKEFSTKSYLTEHMKLHQ 276
                 L +           KC  C   F +   L+ HM   +
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 57.1 bits (137), Expect = 2e-10
 Identities = 19/99 (19%), Positives = 31/99 (31%), Gaps = 8/99 (8%)

Query: 263 STKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSY 321
           S+ S    +  +  G    +C  CS  + T   LT HM      ++          ++  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 322 LTEHMKLHQGIKN-------KCDLCSKEFSHKSNLTKHM 353
                 L +           KC  C   F    +L+ HM
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHM 100

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 56.7 bits (136), Expect = 3e-10
 Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 8/103 (7%)

Query: 236 STKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSY 294
           S+ S    +  +  G    +C  CS  + T   LT HM      ++           +  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 295 LTEHMKLHQGLKN-------KCDLCSKEFSRKSYLTEHMKLHQ 330
                 L +           KC  C   F     L+ HM   +
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 54.4 bits (130), Expect = 1e-09
 Identities = 17/98 (17%), Positives = 30/98 (30%), Gaps = 8/98 (8%)

Query: 290 STKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSN 348
           S+ S    +  +  G    +C  CS  +     LT HM      ++           + +
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 349 LTKHMNLHQGIR-------YKCDLCSKEFSWKGHLTEH 379
             +  +L +           KC  C   F     L+ H
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 50.1 bits (119), Expect = 5e-08
 Identities = 15/96 (15%), Positives = 29/96 (30%), Gaps = 8/96 (8%)

Query: 344 SHKSNLTKHMNLHQG-IRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRI 402
           S  S+   + ++  G  +++C  CS  +     LT H       ++           +  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 403 LTEHMKLHQGIT-------YKCGLCSKEFSCKSNLT 431
                 L +           KC  C   F    +L+
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLS 97

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 24/70 (34%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 308 KCDL--CSKEFSRKSYLTEHMKL-HQGIK-NKCD--LCSKEFSHKSNLTKHMNLHQGIR- 360
            CD   C + FS + YL  H K  H   K   C    C K F+ K +L +HM LH   R 
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68

Query: 361 YKCDLCSKEF 370
           Y C+      
Sbjct: 69  YICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 52.2 bits (126), Expect = 3e-09
 Identities = 24/71 (33%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 172 YKCDL--CSKKFSTKSYLTAHMKL-HQGLK-NKCD--LCSKEFSSKSYLTEHMKLHQGIK 225
             CD   C + FS + YL  H K  H   K   C    C K F+ K +L EHMKLH   +
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 226 N-KCDLCSKEF 235
           +  C+      
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 281 KCDL--CSKEFSTKSYLTEHMKL-HQGLK-NKCD--LCSKEFSRKSYLTEHMKLHQGIKN 334
            CD   C + FS + YL  H K  H   K   C    C K F+ K +L EHMKLH   ++
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68

Query: 335 -KCDLCSKEF 343
             C+      
Sbjct: 69  YICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 22/70 (31%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 335 KCDL--CSKEFSHKSNLTKHM-NLHQGIR-YKCD--LCSKEFSWKGHLTEHRKLHQDIKN 388
            CD   C + FS++  L  H    H   + + C    C K F++K HL EH KLH D ++
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68

Query: 389 -KCDLCSKEF 397
             C+      
Sbjct: 69  YICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 49.9 bits (120), Expect = 2e-08
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 227 KCDL--CSKEFSTKSYLTEHMKL-HQGIK-NKCD--LCSKEFSTKSYLTEHMKLHQGIKN 280
            CD   C + FS + YL  H K  H   K   C    C K F+ K +L EHMKLH   ++
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68

Query: 281 -KCDLCSKEF 289
             C+      
Sbjct: 69  YICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 49.9 bits (120), Expect = 3e-08
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 7/70 (10%)

Query: 200 KCDL--CSKEFSSKSYLTEHMKL-HQGIK-NKCD--LCSKEFSTKSYLTEHMKLHQGIKN 253
            CD   C + FS++ YL  H K  H   K   C    C K F+ K +L EHMKLH   ++
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68

Query: 254 -KCDLCSKEF 262
             C+      
Sbjct: 69  YICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 42.9 bits (102), Expect = 8e-06
 Identities = 23/71 (32%), Positives = 29/71 (40%), Gaps = 7/71 (9%)

Query: 361 YKCDL--CSKEFSWKGHLTEH-RKLHQDIK-NKCD--LCSKEFSSKRILTEHMKLHQGIT 414
             CD   C + FS + +L  H +  H   K   C    C K F+ K+ L EHMKLH    
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 415 -YKCGLCSKEF 424
            Y C       
Sbjct: 68  DYICEFSGPSS 78

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 54.2 bits (131), Expect = 6e-10
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 315 EFSRKSYLTEHMKLHQGIKN-KCDL--CSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEF 370
           E    + L  ++      +   C +  C + FS    LT+H+ +H G + ++C +C + F
Sbjct: 2   EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

Query: 371 SWKGHLTEHRKLH 383
           S   HLT H + H
Sbjct: 60  SRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 50.4 bits (121), Expect = 2e-08
 Identities = 21/73 (28%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 288 EFSTKSYLTEHMKLHQGLKN-KCDL--CSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEF 343
           E    + L  ++      +   C +  C + FSR   LT H+++H G K  +C +C + F
Sbjct: 2   EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

Query: 344 SHKSNLTKHMNLH 356
           S   +LT H+  H
Sbjct: 60  SRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 48.5 bits (116), Expect = 7e-08
 Identities = 21/73 (28%), Positives = 36/73 (49%), Gaps = 6/73 (8%)

Query: 261 EFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEF 316
           E    + L  ++      +   C +  C + FS    LT H+++H G K  +C +C + F
Sbjct: 2   EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

Query: 317 SRKSYLTEHMKLH 329
           SR  +LT H++ H
Sbjct: 60  SRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 47.3 bits (113), Expect = 2e-07
 Identities = 19/53 (35%), Positives = 31/53 (58%), Gaps = 3/53 (5%)

Query: 172 YKCDL--CSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLH 221
           Y C +  C ++FS    LT H+++H G K  +C +C + FS   +LT H++ H
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 46.5 bits (111), Expect = 3e-07
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 207 EFSSKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEF 262
           E    + L  ++      +   C +  C + FS    LT H+++H G K  +C +C + F
Sbjct: 2   EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

Query: 263 STKSYLTEHMKLH 275
           S   +LT H++ H
Sbjct: 60  SRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 19/73 (26%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 180 KFSTKSYLTAHMKLHQGLKN-KCDL--CSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEF 235
           +    + L  ++      +   C +  C + FS    LT H+++H G K  +C +C + F
Sbjct: 2   EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

Query: 236 STKSYLTEHMKLH 248
           S   +LT H++ H
Sbjct: 60  SRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.8 bits (109), Expect = 6e-07
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 6/73 (8%)

Query: 234 EFSTKSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEF 289
           E    + L  ++      +   C +  C + FS    LT H+++H G K  +C +C + F
Sbjct: 2   EPHPMNNLLNYVVPKM--RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

Query: 290 STKSYLTEHMKLH 302
           S   +LT H++ H
Sbjct: 60  SRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.8 bits (109), Expect = 7e-07
 Identities = 21/72 (29%), Positives = 33/72 (45%), Gaps = 4/72 (5%)

Query: 342 EFSHKSNLTKHMNLHQGIRYKCDL--CSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFS 398
           E    +NL  ++       Y C +  C + FS    LT H ++H   K  +C +C + FS
Sbjct: 2   EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

Query: 399 SKRILTEHMKLH 410
               LT H++ H
Sbjct: 61  RSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.2 bits (92), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 23/34 (67%), Gaps = 1/34 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLH 194
           +H+++H G + ++C +C + FS   +LT H++ H
Sbjct: 39  RHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 14/47 (29%), Positives = 27/47 (57%), Gaps = 1/47 (2%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHM 353
            C++C++ F+R+ +L  H + H   K   C LC++ F+ +  L +H 
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 48.6 bits (117), Expect = 4e-08
 Identities = 17/53 (32%), Positives = 30/53 (56%), Gaps = 2/53 (3%)

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHM-KLHQG 331
            C++C++ F+ + +L  H + H   K   C LC++ F+R+  L  H  K+H G
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.9 bits (115), Expect = 7e-08
 Identities = 16/54 (29%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK-NKCDLCSKEFSSKSYLTEHM-KLHQG 223
           + C++C++ F+ + +L  H + H   K   C LC++ F+ +  L  H  K+H G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 45.6 bits (109), Expect = 5e-07
 Identities = 16/53 (30%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHM-KLHQG 277
            C++C++ F+ + +L  H + H   K   C LC++ F+ +  L  H  K+H G
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.7 bits (99), Expect = 1e-05
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHM-KLHQG 412
           + C++C++ F+ + HL  H + H + K   C LC++ F+ + +L  H  K+H G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 13/44 (29%), Positives = 24/44 (54%), Gaps = 1/44 (2%)

Query: 389 KCDLCSKEFSSKRILTEHMKLHQGIT-YKCGLCSKEFSCKSNLT 431
            C++C++ F+ +  L  H + H     Y CGLC++ F+ +  L 
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLI 47

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 51.8 bits (123), Expect = 1e-08
 Identities = 20/86 (23%), Positives = 31/86 (36%), Gaps = 1/86 (1%)

Query: 161 EKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKL 220
                +     Y+C LC+ K S+     +H +L +     C  CS  F S     EH   
Sbjct: 6   SGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESK 64

Query: 221 HQGIKNKCDLCSKEFSTKSYLTEHMK 246
            +  K  C  C + F +   +  H  
Sbjct: 65  CEYKKLTCLECMRTFKSSFSIWRHQV 90

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 47.6 bits (112), Expect = 4e-07
 Identities = 18/74 (24%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCS 259
           +C LC+ + SS      H +L +     C  CS  F +     EH    +  K  C  C 
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76

Query: 260 KEFSTKSYLTEHMK 273
           + F +   +  H  
Sbjct: 77  RTFKSSFSIWRHQV 90

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 47.6 bits (112), Expect = 4e-07
 Identities = 17/74 (22%), Positives = 28/74 (37%), Gaps = 1/74 (1%)

Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCS 286
           +C LC+ + S+      H +L +     C  CS  F +     EH    +  K  C  C 
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76

Query: 287 KEFSTKSYLTEHMK 300
           + F +   +  H  
Sbjct: 77  RTFKSSFSIWRHQV 90

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.4 bits (109), Expect = 9e-07
 Identities = 17/72 (23%), Positives = 28/72 (38%), Gaps = 1/72 (1%)

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCS 340
           +C LC+ + S+      H +L +     C  CS  F       EH    +  K  C  C 
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76

Query: 341 KEFSHKSNLTKH 352
           + F    ++ +H
Sbjct: 77  RTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.0 bits (108), Expect = 1e-06
 Identities = 18/84 (21%), Positives = 31/84 (36%), Gaps = 1/84 (1%)

Query: 347 SNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEH 406
           S  +    +     Y+C LC+ + S       H +L ++    C  CS  F S  +  EH
Sbjct: 3   SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEH 61

Query: 407 MKLHQGITYKCGLCSKEFSCKSNL 430
               +     C  C + F    ++
Sbjct: 62  ESKCEYKKLTCLECMRTFKSSFSI 85

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 46.0 bits (108), Expect = 1e-06
 Identities = 15/74 (20%), Positives = 27/74 (36%), Gaps = 1/74 (1%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCS 367
           +C LC+ + S       H +L +     C  CS  F       +H +  +  +  C  C 
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76

Query: 368 KEFSWKGHLTEHRK 381
           + F     +  H+ 
Sbjct: 77  RTFKSSFSIWRHQV 90

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.5 bits (104), Expect = 4e-06
 Identities = 18/74 (24%), Positives = 25/74 (33%), Gaps = 1/74 (1%)

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCS 394
           +C LC+ + S       H  L +     C  CS  F       EH    +  K  C  C 
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76

Query: 395 KEFSSKRILTEHMK 408
           + F S   +  H  
Sbjct: 77  RTFKSSFSIWRHQV 90

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 51.5 bits (122), Expect = 2e-08
 Identities = 27/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 288 EFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKS 347
           E    S   +++  H+G+     +  +E  R   LT   K       K  + + +   +S
Sbjct: 3   ESDVDSGSKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDES 60

Query: 348 N-LTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEH 406
           + L + +      ++ C LC   FS    L +H +  +  K  C +C KEF+S     +H
Sbjct: 61  SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDH 119

Query: 407 MK 408
           + 
Sbjct: 120 VC 121

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 46.5 bits (109), Expect = 1e-06
 Identities = 27/122 (22%), Positives = 48/122 (39%), Gaps = 4/122 (3%)

Query: 207 EFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKS 266
           E    S   +++  H+GI     +  +E      LT   K       K  + + +   +S
Sbjct: 3   ESDVDSGSKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDES 60

Query: 267 -YLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEH 325
            YL   +      +  C LC   FS+   L +H++  +  K  C +C KEF+      +H
Sbjct: 61  SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDH 119

Query: 326 MK 327
           + 
Sbjct: 120 VC 121

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 46.1 bits (108), Expect = 2e-06
 Identities = 24/114 (21%), Positives = 47/114 (41%), Gaps = 4/114 (3%)

Query: 161 EKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFS-SKSYLTEHMK 219
           +K++  H+G+     +  ++      LT   K       K  + + +     SYL   + 
Sbjct: 11  KKYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA 68

Query: 220 LHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMK 273
                +  C LC   FS+   L +H++  +  K  C +C KEF++     +H+ 
Sbjct: 69  SKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDHVC 121

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 45.3 bits (106), Expect = 3e-06
 Identities = 27/121 (22%), Positives = 47/121 (38%), Gaps = 4/121 (3%)

Query: 234 EFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKS 293
           E    S   +++  H+GI     +  +E      LT   K       K  + + +   +S
Sbjct: 3   ESDVDSGSKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDES 60

Query: 294 -YLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKH 352
            YL   +      +  C LC   FS    L +H++  +  K  C +C KEF+   +   H
Sbjct: 61  SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDH 119

Query: 353 M 353
           +
Sbjct: 120 V 120

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 45.3 bits (106), Expect = 3e-06
 Identities = 25/118 (21%), Positives = 47/118 (39%), Gaps = 4/118 (3%)

Query: 184 KSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKS-YLT 242
            S    ++  H+G+     +  +E      LT   K       K  + + +   +S YL 
Sbjct: 7   DSGSKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLY 64

Query: 243 EHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMK 300
             +      +  C LC   FS+   L +H++  +  K  C +C KEF++     +H+ 
Sbjct: 65  RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDHVC 121

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 45.5 bits (107), Expect = 6e-07
 Identities = 17/56 (30%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 171 RYKCDLCSKKFSTKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIK 225
           +Y C+ C  +    S L  H++ H  ++   C  C+  F +K  LT+HMK     K
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 42.4 bits (99), Expect = 6e-06
 Identities = 16/52 (30%), Positives = 24/52 (46%), Gaps = 1/52 (1%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQG 358
            C+ C     + S L +H++ H  ++   C  C+  F  K NLTKHM     
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 41.6 bits (97), Expect = 1e-05
 Identities = 18/50 (36%), Positives = 24/50 (48%), Gaps = 1/50 (2%)

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
            C+ C       S L KH+  H  +R Y C  C+  F  KG+LT+H K  
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 41.6 bits (97), Expect = 1e-05
 Identities = 16/54 (29%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 360 RYKCDLCSKEFSWKGHLTEHRKLHQDIKN-KCDLCSKEFSSKRILTEHMKLHQG 412
           +Y C+ C         L +H + H D++   C  C+  F +K  LT+HMK    
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 3e-05
 Identities = 16/54 (29%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
            C+ C       S L +H++ H  ++   C  C+  F  K  LT+HMK     K
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 200 KCDLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 252
            C+ C       S L +H++ H  ++   C  C+  F TK  LT+HMK     K
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 227 KCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK 279
            C+ C       S L +H++ H  ++   C  C+  F TK  LT+HMK     K
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.0 bits (98), Expect = 1e-05
 Identities = 13/67 (19%), Positives = 24/67 (35%), Gaps = 7/67 (10%)

Query: 318 RKSYLTEHMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHL 376
                 +  K+H G ++ KC  C   F  +S L++           C+ C K+   +  L
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAAL 55

Query: 377 TEHRKLH 383
            +     
Sbjct: 56  NKDEGNE 62

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 16/69 (23%), Positives = 27/69 (39%), Gaps = 7/69 (10%)

Query: 291 TKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNL 349
           +     +  K+H G ++ KC  C   F R+S L+            C+ C K+   ++ L
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAAL 55

Query: 350 TKHMNLHQG 358
            K      G
Sbjct: 56  NKDEGNESG 64

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 15/71 (21%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 264 TKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYL 322
           +     +  K+H G ++ KC  C   F  +S L+            C+ C K+  +++ L
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAAL 55

Query: 323 TEHMKLHQGIK 333
            +      G K
Sbjct: 56  NKDEGNESGKK 66

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 14/67 (20%), Positives = 23/67 (34%), Gaps = 7/67 (10%)

Query: 347 SNLTKHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTE 405
            +  K   +H G R  KC  C   F  +  L+  +         C+ C K+   +  L +
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNK 57

Query: 406 HMKLHQG 412
                 G
Sbjct: 58  DEGNESG 64

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.5 bits (89), Expect = 3e-04
 Identities = 16/71 (22%), Positives = 27/71 (38%), Gaps = 7/71 (9%)

Query: 210 SKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYL 268
           S     +  K+H G ++ KC  C   F  +S L+            C+ C K+   ++ L
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAAL 55

Query: 269 TEHMKLHQGIK 279
            +      G K
Sbjct: 56  NKDEGNESGKK 66

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 37.3 bits (86), Expect = 7e-04
 Identities = 17/65 (26%), Positives = 25/65 (38%), Gaps = 7/65 (10%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLKNKCDLCSKEFSSKSYLTEHMKL 220
           K  K+H G R  KC  C   F  +S L+            C+ C K+   ++ L +    
Sbjct: 8   KRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAALNKDEGN 61

Query: 221 HQGIK 225
             G K
Sbjct: 62  ESGKK 66

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 36.9 bits (85), Expect = 9e-04
 Identities = 15/71 (21%), Positives = 26/71 (36%), Gaps = 7/71 (9%)

Query: 183 TKSYLTAHMKLHQGLKN-KCDLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYL 241
           +        K+H G ++ KC  C   F  +S L+            C+ C K+   ++ L
Sbjct: 2   SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKT------PMCEKCRKDSCQEAAL 55

Query: 242 TEHMKLHQGIK 252
            +      G K
Sbjct: 56  NKDEGNESGKK 66

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.5 bits (97), Expect = 4e-05
 Identities = 17/67 (25%), Positives = 23/67 (34%), Gaps = 11/67 (16%)

Query: 254 KCDLCSKEFSTKSYLTEHM-KLHQGIKNK---------CDLCSKEFSTKSYLTEHMKLHQ 303
               C + FST   L  H+   H G   +         C    K F  K  L  H+++H 
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86

Query: 304 GLK-NKC 309
           G K    
Sbjct: 87  GEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 41.1 bits (96), Expect = 5e-05
 Identities = 17/68 (25%), Positives = 24/68 (35%), Gaps = 11/68 (16%)

Query: 172 YKCDLCSKKFSTKSYLTAHM-KLHQGLKNK---------CDLCSKEFSSKSYLTEHMKLH 221
                C + FST   L  H+   H G   +         C    K F +K  L  H+++H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 222 QGIK-NKC 228
            G K    
Sbjct: 86  TGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 40.0 bits (93), Expect = 1e-04
 Identities = 16/67 (23%), Positives = 23/67 (34%), Gaps = 11/67 (16%)

Query: 200 KCDLCSKEFSSKSYLTEHM-KLHQGIKNK---------CDLCSKEFSTKSYLTEHMKLHQ 249
               C + FS+   L  H+   H G   +         C    K F  K  L  H+++H 
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86

Query: 250 GIK-NKC 255
           G K    
Sbjct: 87  GEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 39.6 bits (92), Expect = 1e-04
 Identities = 17/67 (25%), Positives = 23/67 (34%), Gaps = 11/67 (16%)

Query: 281 KCDLCSKEFSTKSYLTEHM-KLHQGLKNK---------CDLCSKEFSRKSYLTEHMKLHQ 330
               C + FST   L  H+   H G   +         C    K F  K  L  H+++H 
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86

Query: 331 GIK-NKC 336
           G K    
Sbjct: 87  GEKSGPS 93

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 39.9 bits (94), Expect = 4e-05
 Identities = 12/39 (30%), Positives = 17/39 (43%), Gaps = 2/39 (5%)

Query: 335 KCDLCSKEFSHKSNLTKHM-NLHQGIR-YKCDLCSKEFS 371
            C  C K FS   +L  H+  +H   R +KC +     S
Sbjct: 14  ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 39.9 bits (94), Expect = 5e-05
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 172 YKCDLCSKKFSTKSYLTAHMK-LHQGLK-NKCDLCSKEFSS 210
           Y C  C K FS   +L  H+K +H   + +KC +     SS
Sbjct: 13  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 308 KCDLCSKEFSRKSYLTEHMK-LHQGIK-NKCDLCSKEFS 344
            C  C K FSR  +L  H+K +H   + +KC +     S
Sbjct: 14  ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS 52

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 14/41 (34%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 361 YKCDLCSKEFSWKGHLTEH-RKLHQDIK-NKCDLCSKEFSS 399
           Y C  C K FS   HL  H +++H   + +KC +     SS
Sbjct: 13  YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.2 bits (87), Expect = 4e-04
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 200 KCDLCSKEFSSKSYLTEHMK-LHQGIK-NKCDLCSKEFST 237
            C  C K FS   +L  H+K +H   + +KC +     S+
Sbjct: 14  ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 227 KCDLCSKEFSTKSYLTEHMK-LHQGIK-NKCDLCSKEFST 264
            C  C K FS   +L  H+K +H   + +KC +     S+
Sbjct: 14  ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 12/40 (30%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 254 KCDLCSKEFSTKSYLTEHMK-LHQGIK-NKCDLCSKEFST 291
            C  C K FS   +L  H+K +H   + +KC +     S+
Sbjct: 14  ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 14/35 (40%), Gaps = 1/35 (2%)

Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQG 358
                 G K   C++C   F H   L  H+ +H G
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTG 36

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 9/37 (24%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                 G + Y C++C  +F     L +H+++H G  
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSG 38

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                 G + YKC+ C  +F   ++L AH+ +H G  
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 10/35 (28%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQG 358
                 G K  KC+ C   F   ++L  H+ +H G
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 10/33 (30%), Positives = 13/33 (39%), Gaps = 1/33 (3%)

Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
                 G + YKC+ C   F    HL  H  +H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
                 G K  KC+ C   F + ++L  H+ +H G  
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSG 38

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 38.5 bits (90), Expect = 2e-04
 Identities = 17/66 (25%), Positives = 26/66 (39%), Gaps = 6/66 (9%)

Query: 162 KHMKLHQGVR-YKCDL--CSKKFSTKSYLTAHMKLHQGLKN-KCDL--CSKEFSSKSYLT 215
                   +R + C    C K +   S+L AH + H G K   C    C + F+    L+
Sbjct: 7   GPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELS 66

Query: 216 EHMKLH 221
            H + H
Sbjct: 67  RHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 38.1 bits (89), Expect = 3e-04
 Identities = 16/71 (22%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 292 KSYLTEHMKLHQGLKN-KCDL--CSKEFSRKSYLTEHMKLHQGIKN-KCDL--CSKEFSH 345
            S  +        +++  C    C K + + S+L  H + H G K   C    C + F+ 
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 346 KSNLTKHMNLH 356
              L++H   H
Sbjct: 62  SDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.0 bits (86), Expect = 8e-04
 Identities = 18/71 (25%), Positives = 28/71 (39%), Gaps = 6/71 (8%)

Query: 265 KSYLTEHMKLHQGIKN-KCDL--CSKEFSTKSYLTEHMKLHQGLKN-KCDL--CSKEFSR 318
            S  +        I++  C    C K +   S+L  H + H G K   C    C + F+R
Sbjct: 2   SSGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFAR 61

Query: 319 KSYLTEHMKLH 329
              L+ H + H
Sbjct: 62  SDELSRHRRTH 72

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 42.5 bits (99), Expect = 2e-04
 Identities = 28/208 (13%), Positives = 52/208 (25%), Gaps = 7/208 (3%)

Query: 15  RAIPKKTGDPISIKVDNETVEVSKECKDPKKVANIFNLHYIKVGSSLSENGTHRTAVMEL 74
           + IP+KT    S K ++ T          +   N             S    +R      
Sbjct: 2   KRIPRKTKGKSSGKGNDSTERSDDGSSQLRDKQNNKAGPATTE-PGTSNREQYRARPGIA 60

Query: 75  NVEESEDHVGLSPPLYDPSRVIKHEPLDIPYEVIVKEEYYEGDNINVEDNDLNDAVTRDC 134
           +V+ + +      P+ +       +        +V E     D  +           +  
Sbjct: 61  SVQRATE--SAELPMKNNDEGTPDKK-GNTRGDLVNEHSEAKDEADEATQKQAKDTDKSK 117

Query: 135 LEFFKSCPKVKVKSDHERRSINYKCQEKHMKLHQGVRYKCDLCSKKFSTKSYLTAHMKLH 194
            +   S   +   ++  R        E             +  S   S            
Sbjct: 118 AQVTYSDTGINNANELSRSGNV--DNEGGSNQKPMSTRIAEATSAIVSKHPARVGLPPTA 175

Query: 195 -QGLKNKCDLCSKEFSSKSYLTEHMKLH 221
             G   +C +CS    S   L  H+  H
Sbjct: 176 SSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 11/36 (30%), Positives = 15/36 (41%), Gaps = 1/36 (2%)

Query: 297 EHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQG 331
                    K   C+ C K F+R  +LT H K+H  
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTR 37

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 11/34 (32%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
              +     + Y C+ C K F+   HLT H+K+H
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/42 (28%), Positives = 17/42 (40%), Gaps = 2/42 (4%)

Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKCD 364
                 G K  KCD+C K F  +S L +H  +H   +     
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                 G + +KCD+C K F  +S L  H  +H   K
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEK 39

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.2 bits (87), Expect = 3e-04
 Identities = 13/37 (35%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                 G + Y+CD C K FS K  L  H+++H G  
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSG 38

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                  G + Y C++C K F   ++L  H+++H    
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 5e-04
 Identities = 9/38 (23%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 297 EHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK 333
                  G K   C++C K F   ++L +H+++H    
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQET 39

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 10/34 (29%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 351 KHMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
              +   G + Y C++C K F    HL +H ++H
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVH 35

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                  G + YKC+ C K FS  S L+ H K+H G K
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEK 39

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 5e-04
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                 G + Y C  C K FS+KSYL  HM+ H G K
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEK 39

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQGIR-YKC 363
                 G K  KCD+C K F + S+LT H  +H G +    
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 1/38 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                  G R ++C  C K F   S    H ++H G K
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEK 39

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 15/38 (39%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                  G + +KC  C K FS +S L  H KLH G K
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEK 39

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                  G++ Y C+ C K F +KSYL  H + H G  
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES 39

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 7e-04
 Identities = 12/38 (31%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                  G + YKC+ C K +++K  L  H K+H G +
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGER 39

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.2 bits (84), Expect = 7e-04
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLH 194
             +   G++ ++C  C + FS   +L  H K H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 35.8 bits (83), Expect = 9e-04
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLH 329
             +   G+K  +C  C + FSR  +L  H K H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 13/37 (35%), Positives = 19/37 (51%), Gaps = 1/37 (2%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                 G + +KC+ C K F+  S LT H ++H G K
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEK 39

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 298 HMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK 333
                 G +   C+ C K F R S+L EH+K H   K
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREK 39

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                  GV+ Y C  C+K FS KS L  H + H G+K
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVK 39

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 11/38 (28%), Positives = 19/38 (50%), Gaps = 1/38 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                  G + +KC  C K ++ + +LT H ++H G K
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEK 39

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 9e-04
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 1/38 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
                  G + YKC+ C K FS  S L  H ++H G K
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEK 39

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	431
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.88
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.86
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.85
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.85
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.83
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.83
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.82
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.81
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.75
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.73
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.73
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.73
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.7
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.69
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.69
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.68
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.67
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.67
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.66
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.65
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.65
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.64
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.64
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.62
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.62
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.61
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.6
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.6
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.6
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.57
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.56
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.55
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.55
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.54
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.54
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.52
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.52
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.51
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.49
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.47
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.47
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.45
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.45
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.44
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.44
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.42
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.42
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.39
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.38
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.37
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.37
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.37
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.37
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.34
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.33
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.33
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.33
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.31
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.3
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.29
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.29
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.29
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.29
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.28
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.27
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.26
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.24
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.21
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.18
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.16
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.14
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.13
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.09
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.07
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.05
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.04
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.03
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.02
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.01
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.0
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.0
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.0
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.99
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.99
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.99
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.98
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.98
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.98
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.98
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.97
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.97
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.96
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.96
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.96
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.96
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.96
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.96
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.96
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.95
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.95
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.95
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.95
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.95
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.94
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.94
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.94
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.94
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.94
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.94
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.94
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.94
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.94
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.93
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.93
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.93
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.93
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.92
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.92
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.92
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.92
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.92
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.91
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.91
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.91
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.9
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.9
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.9
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.9
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.9
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.9
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.89
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.89
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.89
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.89
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.89
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.89
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.88
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.88
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.88
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.88
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.88
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.88
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.88
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.87
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.87
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.86
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.86
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.85
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.84
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.84
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.84
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.84
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.84
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.84
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.83
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.83
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.82
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.82
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.81
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.81
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.8
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.8
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.8
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.78
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.78
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.78
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.77
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.77
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.77
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.77
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.77
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.75
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.75
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.75
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.75
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.74
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.74
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.74
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.74
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.72
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.71
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.7
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.7
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.7
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.7
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.69
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.69
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.68
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.68
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.68
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.66
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.64
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.64
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.64
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.61
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.6
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.6
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.59
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.5
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.48
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.47
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.47
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.46
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.44
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.33
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.3
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.29
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.27
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.27
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.26
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.24
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.24
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.23
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.22
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.2
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.19
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.17
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.17
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.16
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.13
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.1
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.1
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.1
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.07
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.06
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.06
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.04
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.04
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.03
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.02
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.01
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.0
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.99
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.98
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.96
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.96
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.96
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.95
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.94
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.94
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.93
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.16
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.92
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.92
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.91
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.91
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.89
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.89
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.88
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.88
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.88
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.86
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.85
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.83
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.04
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.82
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.02
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.8
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.79
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.79
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.78
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.75
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.73
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.92
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.72
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	96.9
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.69
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.66
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.66
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.78
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.57
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.52
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.11
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.77
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.46
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.65
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.86
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.77
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.39
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.34
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.15
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.22
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	87.17
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	83.75
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.23
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	82.47

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.8e-35  Score=259.05  Aligned_cols=178  Identities=39%  Similarity=0.670  Sum_probs=133.4

Q ss_pred             HhHHHHHHHHhcCCCC-CCCcCCcccCChhHHHHHHhHhcCCC-CCCCCCCcccCCHHHHHHHHHHhCCCCC-CCCchhh
Q psy8466         238 KSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGLKN-KCDLCSK  314 (431)
Q Consensus       238 ~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~  314 (431)
                      ...|..|++.+.+.++ .|+.|++.|.+...|..|++.|.+.+ |.|+.|++.|.+...|..|+++|.+.++ .|+.|++
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   85 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGK   85 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCC
Confidence            3457777777777654 88888888888888888888887655 7899999999999999999998887764 8999999


Q ss_pred             ccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         315 EFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       315 ~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      .|.+...|..|+++|++.+ |.|++|++.|.+...|..|+++|++. ||.|++|++.|.+...|..|+++|++.+ |.|+
T Consensus        86 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A           86 SFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             EESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             ccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence            9999999999999998876 79999999999999999999999886 8999999999999999999999998876 9999


Q ss_pred             ccccccCChHHHHHHHHhcCC-CCC
Q psy8466         392 LCSKEFSSKRILTEHMKLHQG-ITY  415 (431)
Q Consensus       392 ~C~~~F~~~~~L~~H~~~H~g-~~~  415 (431)
                      +|++.|.+...|..|+++|+| +||
T Consensus       166 ~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          166 ECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             TTCCEESSHHHHHHHHTTC------
T ss_pred             CCCCccCCHHHHHHHHHhcCCCCCC
Confidence            999999999999999999999 665

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=1.1e-33  Score=247.79  Aligned_cols=176  Identities=40%  Similarity=0.683  Sum_probs=115.4

Q ss_pred             HHHHHHHHHhcCCC-CccCccCcccCCHhHHHHHHHHhcCCCC-CCCcCCcccCChhHHHHHHhHhcCCC-CCCCCCCcc
Q psy8466         212 SYLTEHMKLHQGIK-NKCDLCSKEFSTKSYLTEHMKLHQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGIK-NKCDLCSKE  288 (431)
Q Consensus       212 ~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~  288 (431)
                      ..|..|++.|.+.. |.|+.|++.|.+...|..|++.|++..+ .|+.|++.|.+...|..|++.|.+.+ |.|+.|++.
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   86 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKS   86 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCc
Confidence            34555555555433 5666666666666666666666665544 67777777777777777777666554 678888888


Q ss_pred             cCCHHHHHHHHHHhCCCCC-CCCchhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccc
Q psy8466         289 FSTKSYLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDL  365 (431)
Q Consensus       289 f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~  365 (431)
                      |.+...|..|+++|++.++ .|+.|++.|.+...|..|+++|++.+ |.|++|++.|.+...|..|+++|++. ||.|++
T Consensus        87 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  166 (190)
T 2i13_A           87 FSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPE  166 (190)
T ss_dssp             ESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT
T ss_pred             cCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCC
Confidence            8888888888887776664 88888888888888888888888766 78888999998888899998888875 799999


Q ss_pred             cccccCCHHHHHHHHHHhCCCC
Q psy8466         366 CSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       366 C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      |++.|.+...|..|+++|+|++
T Consensus       167 C~~~f~~~~~L~~H~~~H~~~k  188 (190)
T 2i13_A          167 CGKSFSRRDALNVHQRTHTGKK  188 (190)
T ss_dssp             TCCEESSHHHHHHHHTTC----
T ss_pred             CCCccCCHHHHHHHHHhcCCCC
Confidence            9999999999999999888775

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=2.4e-29  Score=220.03  Aligned_cols=158  Identities=30%  Similarity=0.555  Sum_probs=130.1

Q ss_pred             CCC--CcCCcccCChhHHHHHHhHhcCCC-CCC--CCCCcccCCHHHHHHHHHHhCCCCC-CCC--chhhccCChhHHHH
Q psy8466         253 NKC--DLCSKEFSTKSYLTEHMKLHQGIK-NKC--DLCSKEFSTKSYLTEHMKLHQGLKN-KCD--LCSKEFSRKSYLTE  324 (431)
Q Consensus       253 ~~C--~~C~~~f~~~~~l~~H~~~h~~~~-~~C--~~C~~~f~~~~~L~~H~~~h~~~~~-~C~--~C~~~f~~~~~l~~  324 (431)
                      +.|  +.|++.|.+...|..|++.|.+.+ |.|  +.|++.|.+...|..|+++|.+.++ .|.  .|++.|.+...|..
T Consensus        13 ~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   92 (190)
T 1tf6_A           13 YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK   92 (190)
T ss_dssp             CBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHH
T ss_pred             eeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHH
Confidence            466  567777777777777777776654 677  7788888888888888888877664 787  78888888888888


Q ss_pred             HH-HHhc-CC-CCcc--ccchhccCCchHHHHHHhhhCCC-cccccc--cccccCCHHHHHHHHHHhCCCCCcccc---c
Q psy8466         325 HM-KLHQ-GI-KNKC--DLCSKEFSHKSNLTKHMNLHQGI-RYKCDL--CSKEFSWKGHLTEHRKLHQDIKNKCDL---C  393 (431)
Q Consensus       325 H~-~~h~-~~-~~~C--~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~C~~---C  393 (431)
                      |+ +.|. +. .|.|  +.|++.|.+...|..|+++|++. ||.|+.  |++.|.+...|..|+++|++  |.|..   |
T Consensus        93 H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--~~C~~~~~C  170 (190)
T 1tf6_A           93 HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSC  170 (190)
T ss_dssp             HHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--CCCCSTTTC
T ss_pred             HHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--CcCCCCCcC
Confidence            88 4552 33 3789  88999999999999999999886 899987  99999999999999999998  88888   9


Q ss_pred             ccccCChHHHHHHHHhcCC
Q psy8466         394 SKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       394 ~~~F~~~~~L~~H~~~H~g  412 (431)
                      ++.|.+...|..|+++|+|
T Consensus       171 ~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          171 SFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             CCCCSCHHHHHHHHTTCC-
T ss_pred             CCccccHHHHHHHHHhhcC
Confidence            9999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=3.9e-28  Score=212.30  Aligned_cols=159  Identities=30%  Similarity=0.514  Sum_probs=117.8

Q ss_pred             Ccc--CccCcccCCHhHHHHHHHHhcCCCC-CC--CcCCcccCChhHHHHHHhHhcCCC-CCCC--CCCcccCCHHHHHH
Q psy8466         226 NKC--DLCSKEFSTKSYLTEHMKLHQGIKN-KC--DLCSKEFSTKSYLTEHMKLHQGIK-NKCD--LCSKEFSTKSYLTE  297 (431)
Q Consensus       226 ~~C--~~C~~~f~~~~~L~~H~~~h~~~~~-~C--~~C~~~f~~~~~l~~H~~~h~~~~-~~C~--~C~~~f~~~~~L~~  297 (431)
                      |.|  +.|++.|.+...|..|++.|++.++ .|  +.|++.|.+...|..|++.|.+.+ |.|+  .|++.|.+...|..
T Consensus        13 ~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   92 (190)
T 1tf6_A           13 YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK   92 (190)
T ss_dssp             CBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHH
T ss_pred             eeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHH
Confidence            566  4666666666666666666666544 66  667777777777777777776654 6777  67777777777777


Q ss_pred             HH-HHhC-CCC-CCC--CchhhccCChhHHHHHHHHhcCCC-Ccccc--chhccCCchHHHHHHhhhCCCcccccc---c
Q psy8466         298 HM-KLHQ-GLK-NKC--DLCSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSHKSNLTKHMNLHQGIRYKCDL---C  366 (431)
Q Consensus       298 H~-~~h~-~~~-~~C--~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~--C~k~f~~~~~L~~H~~~h~~~~~~C~~---C  366 (431)
                      |+ +.|. +.+ +.|  +.|++.|.+...|..|+++|++++ |.|++  |+++|.+...|..|+++|++  |.|..   |
T Consensus        93 H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--~~C~~~~~C  170 (190)
T 1tf6_A           93 HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSC  170 (190)
T ss_dssp             HHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--CCCCSTTTC
T ss_pred             HHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--CcCCCCCcC
Confidence            77 3452 232 577  778888888888888888888776 78877  88888888888888888887  88888   8


Q ss_pred             ccccCCHHHHHHHHHHhCCC
Q psy8466         367 SKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       367 ~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ++.|.+...|..|+++|+++
T Consensus       171 ~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          171 SFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CCCCSCHHHHHHHHTTCC--
T ss_pred             CCccccHHHHHHHHHhhcCC
Confidence            88888888888888888763

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=3.6e-25  Score=186.72  Aligned_cols=134  Identities=34%  Similarity=0.647  Sum_probs=113.0

Q ss_pred             CCCCCCCCcccCCHHHHHHHHH---HhCCCC-CC-----CCchhhccCChhHHHHHHHHhcCCC-Ccccc--chhccCCc
Q psy8466         279 KNKCDLCSKEFSTKSYLTEHMK---LHQGLK-NK-----CDLCSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSHK  346 (431)
Q Consensus       279 ~~~C~~C~~~f~~~~~L~~H~~---~h~~~~-~~-----C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~--C~k~f~~~  346 (431)
                      .+.|+.|++.|.+...|..|++   +|.+.+ +.     |..|++.|.+...|..|+++|++.+ |.|++  |++.|.+.
T Consensus         3 ~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~   82 (155)
T 2gli_A            3 DCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRL   82 (155)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSH
T ss_pred             cCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCH
Confidence            3567777777777777777776   444444 34     4455699999999999999998876 79985  99999999


Q ss_pred             hHHHHHHhhhCCC-cccccc--cccccCCHHHHHHHH-HHhCCCC-Ccccc--cccccCChHHHHHHHHhcCC
Q psy8466         347 SNLTKHMNLHQGI-RYKCDL--CSKEFSWKGHLTEHR-KLHQDIK-NKCDL--CSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       347 ~~L~~H~~~h~~~-~~~C~~--C~~~f~~~~~L~~H~-~~H~~~~-~~C~~--C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ..|..|+++|++. +|.|++  |++.|.+...|..|+ ++|.+.+ |.|++  |++.|.+...|..|+++|+|
T Consensus        83 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           83 ENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             HHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            9999999999886 899998  999999999999998 7898877 99988  99999999999999999987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=3.2e-24  Score=180.87  Aligned_cols=104  Identities=36%  Similarity=0.664  Sum_probs=87.8

Q ss_pred             CCCCCcccCCHHHHHHHHHHhCCCC-CCCCc--hhhccCChhHHHHHHHHhcCCC-Ccccc--chhccCCchHHHHHH-h
Q psy8466         282 CDLCSKEFSTKSYLTEHMKLHQGLK-NKCDL--CSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSHKSNLTKHM-N  354 (431)
Q Consensus       282 C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~C~~--C~k~f~~~~~L~~H~-~  354 (431)
                      |..|++.|.+...|..|+++|++.+ +.|++  |++.|.+...|..|+++|++.+ |.|++  |++.|.+...|..|+ +
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  121 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR  121 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH
Confidence            5556688888888888888887766 48875  8888888888888888888776 79998  999999999999998 7


Q ss_pred             hhCCC-cccccc--cccccCCHHHHHHHHHHhCC
Q psy8466         355 LHQGI-RYKCDL--CSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       355 ~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~H~~  385 (431)
                      +|.+. +|.|++  |++.|.+...|..|+++|+|
T Consensus       122 ~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             hcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            88876 799988  99999999999999998875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.88  E-value=9e-24  Score=172.45  Aligned_cols=103  Identities=22%  Similarity=0.442  Sum_probs=90.7

Q ss_pred             HHHHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChH
Q psy8466         325 HMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKR  401 (431)
Q Consensus       325 H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~  401 (431)
                      |.++|.|++ |.|++|+++|.+...|..|+++|++. ||.|++|+++|.+...|..|+++|++++ |.|++||+.|.+.+
T Consensus        13 ~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~   92 (133)
T 2lt7_A           13 YELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQ   92 (133)
T ss_dssp             EEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHH
T ss_pred             ceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHH
Confidence            445677877 89999999999999999999999886 8999999999999999999999998876 89999999999999


Q ss_pred             HHHHHHHhcCC-------CCCccCccccccCCC
Q psy8466         402 ILTEHMKLHQG-------ITYKCGLCSKEFSCK  427 (431)
Q Consensus       402 ~L~~H~~~H~g-------~~~~C~~C~~~f~~~  427 (431)
                      .|..|+++|+|       ++|+|..|++.|...
T Consensus        93 ~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           93 FMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            99999999886       358999999988764

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.86  E-value=2e-22  Score=169.90  Aligned_cols=120  Identities=27%  Similarity=0.546  Sum_probs=94.2

Q ss_pred             CCCCCCCcccCCHHHHHHHHHH-hCCCCC-CCCchhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHHHhhhC
Q psy8466         280 NKCDLCSKEFSTKSYLTEHMKL-HQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQ  357 (431)
Q Consensus       280 ~~C~~C~~~f~~~~~L~~H~~~-h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~h~  357 (431)
                      |.|..|++.|.+...|..|++. |.+..+ ....|                   ..|.|++|++.|.+...|..|+++|+
T Consensus        26 ~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~-------------------~~~~C~~C~~~f~~~~~l~~H~~~h~   86 (155)
T 2rpc_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-------------------YWEECPREGKSFKAKYKLVNHIRVHT   86 (155)
T ss_dssp             SSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC-------------------CBTTCTTSSCCCSSHHHHHHHTHHHH
T ss_pred             cccccCCcccCCHHHHHHHHHhhcCCCcccCCccc-------------------cccCCCCcccccCCHHHHHHHHHhcC
Confidence            5566666666666666666655 433221 11111                   12689999999999999999999998


Q ss_pred             CC-cccccc--cccccCCHHHHHHHHHHhCCCC-Ccccc--cccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         358 GI-RYKCDL--CSKEFSWKGHLTEHRKLHQDIK-NKCDL--CSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       358 ~~-~~~C~~--C~~~f~~~~~L~~H~~~H~~~~-~~C~~--C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      +. +|.|.+  |++.|.+...|..|+++|++.+ |.|.+  |++.|.+...|..|+++|+| +||.|.
T Consensus        87 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           87 GEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            75 899998  9999999999999999999877 99997  99999999999999999999 889885

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.85  E-value=2.5e-21  Score=156.53  Aligned_cols=106  Identities=33%  Similarity=0.601  Sum_probs=83.6

Q ss_pred             CCCCchhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhh---CC-CcccccccccccCCHHHHHHHHH
Q psy8466         307 NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLH---QG-IRYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       307 ~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h---~~-~~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      +.|+.|++.|.+...|..|+++|++.+ |.|++|++.|.+...|..|++.|   .+ .+|.|++|++.|.+...|..|++
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~   87 (124)
T 2dlq_A            8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMV   87 (124)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            477777777777777777777777655 68888888888888888888753   33 37888888888888888888888


Q ss_pred             HhCCCC-CcccccccccCChHHHHHHHHh-cCC
Q psy8466         382 LHQDIK-NKCDLCSKEFSSKRILTEHMKL-HQG  412 (431)
Q Consensus       382 ~H~~~~-~~C~~C~~~F~~~~~L~~H~~~-H~g  412 (431)
                      +|++.+ |.|++|++.|.+...|..|++. |.|
T Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           88 SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            888776 8888888888888888888875 444

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.85  E-value=1.1e-21  Score=157.56  Aligned_cols=104  Identities=33%  Similarity=0.701  Sum_probs=82.6

Q ss_pred             CCCCc--hhhccCChhHHHHHHHHhcCCC-Cccc--cchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHH
Q psy8466         307 NKCDL--CSKEFSRKSYLTEHMKLHQGIK-NKCD--LCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHR  380 (431)
Q Consensus       307 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~C~--~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~  380 (431)
                      +.|.+  |++.|.+...|..|+++|++.+ |.|+  .|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|+
T Consensus         7 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   86 (119)
T 2jp9_A            7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHT   86 (119)
T ss_dssp             BCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred             eeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHH
Confidence            46765  7777777777777777777655 6787  6888888888888888887765 788888888888888888888


Q ss_pred             HHhCCCC-Ccc--cccccccCChHHHHHHHHhc
Q psy8466         381 KLHQDIK-NKC--DLCSKEFSSKRILTEHMKLH  410 (431)
Q Consensus       381 ~~H~~~~-~~C--~~C~~~F~~~~~L~~H~~~H  410 (431)
                      ++|++.+ |.|  +.|++.|.+...|..|+++|
T Consensus        87 ~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           87 RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            8887766 788  78888888888888888876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=8.2e-22  Score=159.50  Aligned_cols=109  Identities=28%  Similarity=0.561  Sum_probs=91.3

Q ss_pred             CCCC--chhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHHHhhhCCC-cccccc--cccccCCHHHHHHHHH
Q psy8466         307 NKCD--LCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDL--CSKEFSWKGHLTEHRK  381 (431)
Q Consensus       307 ~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~--C~~~f~~~~~L~~H~~  381 (431)
                      +.|+  .|++.|.+...|..|+++|....|.|++|++.|.+...|..|+++|++. +|.|++  |++.|.+...|..|++
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~   85 (124)
T 1ubd_C            6 IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVR   85 (124)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHHH
T ss_pred             ccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHHH
Confidence            4677  7888888888888888888444479999999999999999999999876 799976  9999999999999999


Q ss_pred             HhCCCC-Cccc--ccccccCChHHHHHHHHhcCC-CCC
Q psy8466         382 LHQDIK-NKCD--LCSKEFSSKRILTEHMKLHQG-ITY  415 (431)
Q Consensus       382 ~H~~~~-~~C~--~C~~~F~~~~~L~~H~~~H~g-~~~  415 (431)
                      +|++.+ |.|+  .|++.|.+...|..|+++|+| +++
T Consensus        86 ~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           86 IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            998876 9996  499999999999999999998 554

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.84  E-value=4.5e-21  Score=161.54  Aligned_cols=121  Identities=28%  Similarity=0.557  Sum_probs=82.6

Q ss_pred             CCCCCcCCcccCChhHHHHHHhH-hcCCCC-CCCCCCcccCCHHHHHHHHHHhCCCCCCCCchhhccCChhHHHHHHHHh
Q psy8466         252 KNKCDLCSKEFSTKSYLTEHMKL-HQGIKN-KCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLH  329 (431)
Q Consensus       252 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~-~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h  329 (431)
                      .+.|..|++.|.+...|..|++. |.+... ....|                   ..+.|..|++.|.+...|..|+++|
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~-------------------~~~~C~~C~~~f~~~~~l~~H~~~h   85 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-------------------YWEECPREGKSFKAKYKLVNHIRVH   85 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCC-------------------CBTTCTTSSCCCSSHHHHHHHTHHH
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccc-------------------cccCCCCcccccCCHHHHHHHHHhc
Confidence            35899999999999999999998 655431 11111                   1235666666666666666666666


Q ss_pred             cCCC-Ccccc--chhccCCchHHHHHHhhhCCC-cccccc--cccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         330 QGIK-NKCDL--CSKEFSHKSNLTKHMNLHQGI-RYKCDL--CSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       330 ~~~~-~~C~~--C~k~f~~~~~L~~H~~~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      ++.+ |.|++  |++.|.+...|..|+++|++. +|.|++  |++.|.+...|..|+++|++++ |.|.
T Consensus        86 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           86 TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            5554 56766  777777777777777777665 677775  7777777777777777777665 6664

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=1.4e-20  Score=152.09  Aligned_cols=108  Identities=35%  Similarity=0.627  Sum_probs=92.8

Q ss_pred             CCCCCCCCcccCCHHHHHHHHHHhCCCC-CCCCchhhccCChhHHHHHHHHh---cCCC-CccccchhccCCchHHHHHH
Q psy8466         279 KNKCDLCSKEFSTKSYLTEHMKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLH---QGIK-NKCDLCSKEFSHKSNLTKHM  353 (431)
Q Consensus       279 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h---~~~~-~~C~~C~k~f~~~~~L~~H~  353 (431)
                      .|.|+.|++.|.+...|..|+++|.+.+ +.|+.|++.|.+...|..|++.|   .+.+ |.|++|++.|.+...|..|+
T Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~   86 (124)
T 2dlq_A            7 GVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHM   86 (124)
T ss_dssp             SCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHH
T ss_pred             CCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHH
Confidence            4788888888888888888888888766 48999999999999999998864   4444 79999999999999999999


Q ss_pred             hhhCCC-cccccccccccCCHHHHHHHHH-HhCCC
Q psy8466         354 NLHQGI-RYKCDLCSKEFSWKGHLTEHRK-LHQDI  386 (431)
Q Consensus       354 ~~h~~~-~~~C~~C~~~f~~~~~L~~H~~-~H~~~  386 (431)
                      ++|++. ||.|++|++.|.+...|..|++ .|.+.
T Consensus        87 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           87 VSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            999886 8999999999999999999987 56654

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.83  E-value=5.2e-22  Score=161.98  Aligned_cols=101  Identities=25%  Similarity=0.402  Sum_probs=72.9

Q ss_pred             HHhCCCC-CCCCchhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHH
Q psy8466         300 KLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHL  376 (431)
Q Consensus       300 ~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L  376 (431)
                      ++|.|++ |.|++|++.|.+...|..|+++|++++ |.|++|+++|.+...|..|+++|+++ ||.|++||++|.+...|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            3455655 477777777777777777777777665 67777777777777777777777765 67788888888888888


Q ss_pred             HHHHHHhCCC-------CCcccccccccCCh
Q psy8466         377 TEHRKLHQDI-------KNKCDLCSKEFSSK  400 (431)
Q Consensus       377 ~~H~~~H~~~-------~~~C~~C~~~F~~~  400 (431)
                      ..|+++|+++       .|+|.+|++.|...
T Consensus        95 ~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           95 SSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             HHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            8887776543       26788888877654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.82  E-value=1.4e-20  Score=151.04  Aligned_cols=105  Identities=33%  Similarity=0.710  Sum_probs=93.1

Q ss_pred             CCCCCC--CCcccCCHHHHHHHHHHhCCCCC-CCC--chhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHH
Q psy8466         279 KNKCDL--CSKEFSTKSYLTEHMKLHQGLKN-KCD--LCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKH  352 (431)
Q Consensus       279 ~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~-~C~--~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H  352 (431)
                      .|.|..  |++.|.+...|..|+++|.+.++ .|+  .|++.|.+...|..|+++|++.+ |.|++|++.|.+...|..|
T Consensus         6 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   85 (119)
T 2jp9_A            6 PFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTH   85 (119)
T ss_dssp             CBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHH
T ss_pred             eeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHH
Confidence            478886  99999999999999988887664 888  69999999999999999988876 7999999999999999999


Q ss_pred             HhhhCCC-cccc--cccccccCCHHHHHHHHHHh
Q psy8466         353 MNLHQGI-RYKC--DLCSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       353 ~~~h~~~-~~~C--~~C~~~f~~~~~L~~H~~~H  383 (431)
                      +++|++. +|.|  +.|++.|.+...|..|+++|
T Consensus        86 ~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           86 TRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999886 7999  88999999999999999886

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.81  E-value=1.2e-20  Score=152.58  Aligned_cols=109  Identities=33%  Similarity=0.597  Sum_probs=89.2

Q ss_pred             CCCCC--CCCcccCCHHHHHHHHHHhCCCCCCCCchhhccCChhHHHHHHHHhcCCC-Ccccc--chhccCCchHHHHHH
Q psy8466         279 KNKCD--LCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDL--CSKEFSHKSNLTKHM  353 (431)
Q Consensus       279 ~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~--C~k~f~~~~~L~~H~  353 (431)
                      .|.|+  .|++.|.+...|..|+++|....+.|+.|++.|.+...|..|+++|++.+ |.|++  |++.|.+...|..|+
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~   84 (124)
T 1ubd_C            5 TIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHV   84 (124)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHHH
T ss_pred             cccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHHH
Confidence            46787  78888888888888888883333588888888888888888888888776 78876  999999999999999


Q ss_pred             hhhCCC-ccccc--ccccccCCHHHHHHHHHHhCCCC
Q psy8466         354 NLHQGI-RYKCD--LCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       354 ~~h~~~-~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      ++|++. +|.|+  .|++.|.+...|..|+++|++.+
T Consensus        85 ~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k  121 (124)
T 1ubd_C           85 RIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK  121 (124)
T ss_dssp             HHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC---
T ss_pred             HHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccc
Confidence            988876 79995  49999999999999999998765

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.75  E-value=3.3e-18  Score=134.07  Aligned_cols=84  Identities=35%  Similarity=0.668  Sum_probs=77.2

Q ss_pred             CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcC
Q psy8466         334 NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      |.|++|++.|.....|..|+++|++. +|.|++|++.|.+...|..|+++|++.+ |.|.+|++.|.+...|..|+++|+
T Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   97 (106)
T 2ee8_A           18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM   97 (106)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTT
T ss_pred             eECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhC
Confidence            78999999999999999999999886 7999999999999999999999998877 999999999999999999999999


Q ss_pred             C-CCCcc
Q psy8466         412 G-ITYKC  417 (431)
Q Consensus       412 g-~~~~C  417 (431)
                      + +||.+
T Consensus        98 ~~~~~~~  104 (106)
T 2ee8_A           98 QTSSPTA  104 (106)
T ss_dssp             SCCCCCC
T ss_pred             CCCCCcC
Confidence            8 67764

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.73  E-value=1.7e-18  Score=128.91  Aligned_cols=79  Identities=34%  Similarity=0.749  Sum_probs=70.3

Q ss_pred             CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcC
Q psy8466         334 NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      |.|++|++.|.+...|..|+++|++. +|.|+.|++.|.+...|..|+++|++.+ |.|.+|++.|.+...|..|+++|+
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~   81 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHT   81 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhC
Confidence            57899999999999999999988775 7999999999999999999999988776 899999999999999999999998


Q ss_pred             C
Q psy8466         412 G  412 (431)
Q Consensus       412 g  412 (431)
                      |
T Consensus        82 g   82 (82)
T 2kmk_A           82 G   82 (82)
T ss_dssp             -
T ss_pred             C
Confidence            6

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=1.9e-18  Score=135.71  Aligned_cols=91  Identities=21%  Similarity=0.291  Sum_probs=79.6

Q ss_pred             HHHhcCCC-CccccchhccCCchHHHHHHhhhCCCcccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHH
Q psy8466         326 MKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRIL  403 (431)
Q Consensus       326 ~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L  403 (431)
                      +++|.+++ |.|++|++.|.....|..|+++|. .+|.|++|++.|.....|..|++ |++++ |.|.+|++.|.+...|
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~-~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH-HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC-CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            45667766 799999999999999999999984 58999999999999999999996 88877 9999999999999999


Q ss_pred             HHHHH-hcCC-CCCccC
Q psy8466         404 TEHMK-LHQG-ITYKCG  418 (431)
Q Consensus       404 ~~H~~-~H~g-~~~~C~  418 (431)
                      ..|++ +|++ +||.|.
T Consensus        86 ~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCCC
Confidence            99997 7877 778774

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=5.2e-18  Score=130.36  Aligned_cols=79  Identities=35%  Similarity=0.734  Sum_probs=73.4

Q ss_pred             CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcC
Q psy8466         334 NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      |.|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|+++|++.+ |.|.+|++.|.+...|..|+++|+
T Consensus         9 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   88 (96)
T 2dmd_A            9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHT   88 (96)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             eECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhc
Confidence            79999999999999999999999875 8999999999999999999999998877 899999999999999999999999


Q ss_pred             C
Q psy8466         412 G  412 (431)
Q Consensus       412 g  412 (431)
                      |
T Consensus        89 ~   89 (96)
T 2dmd_A           89 G   89 (96)
T ss_dssp             S
T ss_pred             C
Confidence            8

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.70  E-value=5.6e-19  Score=140.74  Aligned_cols=94  Identities=26%  Similarity=0.269  Sum_probs=75.9

Q ss_pred             hhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhh--hCCC-c-cccccccccc--CCHHHHHHHHHHhCCCC-Ccc
Q psy8466         319 KSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNL--HQGI-R-YKCDLCSKEF--SWKGHLTEHRKLHQDIK-NKC  390 (431)
Q Consensus       319 ~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~--h~~~-~-~~C~~C~~~f--~~~~~L~~H~~~H~~~~-~~C  390 (431)
                      ...|..|+++|++++ |.|++|++.|.+...|..|+++  |.+. + +.|++|++.|  .....|..|+++|++++ |.|
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            345667888888776 6888888888888888888887  5544 3 4588888888  88888888888888776 888


Q ss_pred             cccccccCChHHHHHHHHhcCC
Q psy8466         391 DLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       391 ~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      .+|++.|.+...|..|+++|+.
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTT
T ss_pred             CCCCCccCCHHHHHHHHHHhCC
Confidence            8888888888888888888776

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.69  E-value=1.1e-17  Score=126.90  Aligned_cols=79  Identities=33%  Similarity=0.759  Sum_probs=69.2

Q ss_pred             Cccc--cchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHh
Q psy8466         334 NKCD--LCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       334 ~~C~--~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~  409 (431)
                      |.|+  .|++.|.....|..|+++|++. +|.|+.|++.|.+...|..|+++|++.+ |.|++|++.|.+...|..|+++
T Consensus         5 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   84 (90)
T 1a1h_A            5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI   84 (90)
T ss_dssp             EECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGG
T ss_pred             eECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHH
Confidence            6787  5999999999999999888775 7999999999999999999998888776 8999999999999999999999


Q ss_pred             cCC
Q psy8466         410 HQG  412 (431)
Q Consensus       410 H~g  412 (431)
                      |+|
T Consensus        85 H~~   87 (90)
T 1a1h_A           85 HLR   87 (90)
T ss_dssp             GGC
T ss_pred             hcc
Confidence            887

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.69  E-value=4e-17  Score=125.08  Aligned_cols=80  Identities=31%  Similarity=0.637  Sum_probs=72.9

Q ss_pred             CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCC---CCcccccccccCChHHHHHHHH-
Q psy8466         334 NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDI---KNKCDLCSKEFSSKRILTEHMK-  408 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~---~~~C~~C~~~F~~~~~L~~H~~-  408 (431)
                      |.|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|+++|++.   +|.|.+|++.|.+...|..|++ 
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~   87 (95)
T 2yt9_A            8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQ   87 (95)
T ss_dssp             EECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHH
T ss_pred             eECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHH
Confidence            79999999999999999999999876 899999999999999999999999875   4999999999999999999996 


Q ss_pred             hcCCC
Q psy8466         409 LHQGI  413 (431)
Q Consensus       409 ~H~g~  413 (431)
                      +|.|.
T Consensus        88 ~H~~~   92 (95)
T 2yt9_A           88 VHSGP   92 (95)
T ss_dssp             TSCCC
T ss_pred             hcCCC
Confidence            67763

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.68  E-value=1.1e-16  Score=125.33  Aligned_cols=83  Identities=28%  Similarity=0.615  Sum_probs=67.8

Q ss_pred             CCCCchhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhC
Q psy8466         307 NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       307 ~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      +.|..|++.|.+...|..|+++|++.+ |.|++|++.|.....|..|+++|++. +|.|.+|++.|.+...|..|+++|+
T Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   97 (106)
T 2ee8_A           18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM   97 (106)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTT
T ss_pred             eECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhC
Confidence            477777777777777777877777765 78888888888888888888888875 7888888888888888888888888


Q ss_pred             CCC-Cc
Q psy8466         385 DIK-NK  389 (431)
Q Consensus       385 ~~~-~~  389 (431)
                      +++ |.
T Consensus        98 ~~~~~~  103 (106)
T 2ee8_A           98 QTSSPT  103 (106)
T ss_dssp             SCCCCC
T ss_pred             CCCCCc
Confidence            776 54

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.67  E-value=1.9e-17  Score=114.24  Aligned_cols=57  Identities=26%  Similarity=0.593  Sum_probs=48.5

Q ss_pred             CCcccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCCCC
Q psy8466         358 GIRYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGIT  414 (431)
Q Consensus       358 ~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g~~  414 (431)
                      .+||.|++||++|.+.+.|..|+++|+|++ |.|.+||+.|.+.+.|..|+++|+|+|
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            358888889999988888999988888877 889899999999999999988888864

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=3.5e-17  Score=129.09  Aligned_cols=84  Identities=37%  Similarity=0.756  Sum_probs=71.4

Q ss_pred             HhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHH
Q psy8466         328 LHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILT  404 (431)
Q Consensus       328 ~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~  404 (431)
                      .|++.+ |.| .|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|+++|++.+ |.|.+|++.|.+...|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            355655 688 8888888888899998888875 7899999999999999999988888776 88999999999999999


Q ss_pred             HHHHhcCC
Q psy8466         405 EHMKLHQG  412 (431)
Q Consensus       405 ~H~~~H~g  412 (431)
                      .|+++|++
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            99988875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.66  E-value=4.3e-17  Score=121.17  Aligned_cols=78  Identities=36%  Similarity=0.778  Sum_probs=62.8

Q ss_pred             CCCchhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCC
Q psy8466         308 KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       308 ~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      .|+.|++.|.+...|..|+++|++.+ |.|+.|++.|.+...|..|+++|++. +|.|+.|++.|.+...|..|+++|+|
T Consensus         3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A            3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             cCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            57777777777777777777777665 68888888888888888888888775 78888888888888888888888865

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.2e-16  Score=122.60  Aligned_cols=81  Identities=36%  Similarity=0.697  Sum_probs=68.6

Q ss_pred             CCCCchhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhC
Q psy8466         307 NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       307 ~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      +.|..|++.|.+...|..|+++|++.+ |.|++|++.|.....|..|+++|++. +|.|++|++.|.+...|..|+++|+
T Consensus         9 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   88 (96)
T 2dmd_A            9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHT   88 (96)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             eECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhc
Confidence            478888888888888888888887765 78888998898888899998888876 7999999999999999999999888


Q ss_pred             CCC
Q psy8466         385 DIK  387 (431)
Q Consensus       385 ~~~  387 (431)
                      +++
T Consensus        89 ~~~   91 (96)
T 2dmd_A           89 GDS   91 (96)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            765

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.65  E-value=5.4e-18  Score=134.97  Aligned_cols=94  Identities=19%  Similarity=0.240  Sum_probs=73.6

Q ss_pred             HHHHHHHHhCCCCC-CCCchhhccCChhHHHHHHHH--hcCCC--Cccccchhcc--CCchHHHHHHhhhCCC-cccccc
Q psy8466         294 YLTEHMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKL--HQGIK--NKCDLCSKEF--SHKSNLTKHMNLHQGI-RYKCDL  365 (431)
Q Consensus       294 ~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~--h~~~~--~~C~~C~k~f--~~~~~L~~H~~~h~~~-~~~C~~  365 (431)
                      .|..|+++|+++++ .|..|++.|.+...|..|+++  |.+.+  +.|++|++.|  .....|..|+++|++. ||.|++
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~   85 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMY   85 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSS
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCC
Confidence            45567777776664 777777777777777777777  55444  3589999888  8888899999998876 899999


Q ss_pred             cccccCCHHHHHHHHHHhCCCC
Q psy8466         366 CSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       366 C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      |++.|.+...|..|+++|+...
T Consensus        86 C~k~f~~~~~L~~H~~~hh~~~  107 (115)
T 2dmi_A           86 CGHSFESLQDLSVHMIKTKHYQ  107 (115)
T ss_dssp             SCCBCSSHHHHHHHHHHTTTTT
T ss_pred             CCCccCCHHHHHHHHHHhCCcc
Confidence            9999999999999998876543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=9.5e-17  Score=121.61  Aligned_cols=81  Identities=33%  Similarity=0.778  Sum_probs=64.3

Q ss_pred             CCCC--chhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHH
Q psy8466         307 NKCD--LCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKL  382 (431)
Q Consensus       307 ~~C~--~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~  382 (431)
                      +.|+  .|++.|.+...|..|+++|++.+ |.|+.|++.|.+...|..|+++|++. +|.|+.|++.|.+...|..|+++
T Consensus         5 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   84 (90)
T 1a1h_A            5 YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKI   84 (90)
T ss_dssp             EECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGG
T ss_pred             eECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHH
Confidence            4676  58888888888888887777665 68888888888888888888888775 78888888888888888888888


Q ss_pred             hCCCC
Q psy8466         383 HQDIK  387 (431)
Q Consensus       383 H~~~~  387 (431)
                      |++++
T Consensus        85 H~~~k   89 (90)
T 1a1h_A           85 HLRQK   89 (90)
T ss_dssp             GGC--
T ss_pred             hcccC
Confidence            87754

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.64  E-value=2.6e-16  Score=121.67  Aligned_cols=79  Identities=37%  Similarity=0.722  Sum_probs=71.6

Q ss_pred             Ccccc--chhccCCchHHHHHHhhhCCC-ccccc--ccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHH
Q psy8466         334 NKCDL--CSKEFSHKSNLTKHMNLHQGI-RYKCD--LCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHM  407 (431)
Q Consensus       334 ~~C~~--C~k~f~~~~~L~~H~~~h~~~-~~~C~--~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~  407 (431)
                      |.|.+  |++.|.....|..|+++|++. +|.|+  .|++.|.+...|..|+++|++.+ |.|.+|++.|.+...|..|+
T Consensus        16 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   95 (100)
T 2ebt_A           16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM   95 (100)
T ss_dssp             EECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHH
T ss_pred             eEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHH
Confidence            68886  999999999999999999875 89996  59999999999999999998877 99999999999999999999


Q ss_pred             HhcCC
Q psy8466         408 KLHQG  412 (431)
Q Consensus       408 ~~H~g  412 (431)
                      ++|+|
T Consensus        96 ~~H~~  100 (100)
T 2ebt_A           96 KRHQN  100 (100)
T ss_dssp             HHHCC
T ss_pred             HHhCC
Confidence            99975

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.2e-16  Score=125.34  Aligned_cols=91  Identities=18%  Similarity=0.294  Sum_probs=72.1

Q ss_pred             HHHhCCCC-CCCCchhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHH
Q psy8466         299 MKLHQGLK-NKCDLCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHL  376 (431)
Q Consensus       299 ~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L  376 (431)
                      +++|.+++ +.|..|++.|.....|..|+++|. ..|.|++|++.|.....|..|++ |++. ||.|++|++.|.+...|
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~-~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH-HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHCC-CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            34556555 478888888888888888888774 35789999999999999999985 7775 79999999999999999


Q ss_pred             HHHHH-HhCCCC-Cccc
Q psy8466         377 TEHRK-LHQDIK-NKCD  391 (431)
Q Consensus       377 ~~H~~-~H~~~~-~~C~  391 (431)
                      ..|++ +|.+++ |.|.
T Consensus        86 ~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCCC
Confidence            99987 888776 6653

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.62  E-value=2.2e-16  Score=119.28  Aligned_cols=79  Identities=34%  Similarity=0.699  Sum_probs=69.5

Q ss_pred             CCcccc--chhccCCchHHHHHHhhhCCC-ccccc--ccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHH
Q psy8466         333 KNKCDL--CSKEFSHKSNLTKHMNLHQGI-RYKCD--LCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEH  406 (431)
Q Consensus       333 ~~~C~~--C~k~f~~~~~L~~H~~~h~~~-~~~C~--~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H  406 (431)
                      .|.|++  |++.|.+...|..|+++|++. +|.|+  .|++.|.+...|..|+++|++.+ |.|++|++.|.....|..|
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (89)
T 2wbs_A            5 THTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALH   84 (89)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHH
Confidence            378888  999999999999999998875 79997  59999999999999999998876 8999999999999999999


Q ss_pred             HHhcC
Q psy8466         407 MKLHQ  411 (431)
Q Consensus       407 ~~~H~  411 (431)
                      +++|.
T Consensus        85 ~~~H~   89 (89)
T 2wbs_A           85 MKRHF   89 (89)
T ss_dssp             GGGGC
T ss_pred             HHhhC
Confidence            98884

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.62  E-value=5.9e-16  Score=118.49  Aligned_cols=80  Identities=34%  Similarity=0.655  Sum_probs=66.1

Q ss_pred             CCCCchhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCC---CcccccccccccCCHHHHHHHHH-
Q psy8466         307 NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQG---IRYKCDLCSKEFSWKGHLTEHRK-  381 (431)
Q Consensus       307 ~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~---~~~~C~~C~~~f~~~~~L~~H~~-  381 (431)
                      +.|..|++.|.+...|..|+++|++.+ |.|++|++.|.+...|..|+++|++   .+|.|++|++.|.+...|..|++ 
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~   87 (95)
T 2yt9_A            8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQ   87 (95)
T ss_dssp             EECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHH
T ss_pred             eECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHH
Confidence            478888888888888888888887766 6888888888888888888888887   47899999999999999999985 


Q ss_pred             HhCCC
Q psy8466         382 LHQDI  386 (431)
Q Consensus       382 ~H~~~  386 (431)
                      +|.+.
T Consensus        88 ~H~~~   92 (95)
T 2yt9_A           88 VHSGP   92 (95)
T ss_dssp             TSCCC
T ss_pred             hcCCC
Confidence            77664

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.61  E-value=2.8e-17  Score=124.09  Aligned_cols=79  Identities=23%  Similarity=0.497  Sum_probs=66.9

Q ss_pred             CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCCCcccccccccCChHHHHHHHHhcCC
Q psy8466         334 NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.|++|++.|.....|..|+++|++. ||.|+.|++.|.+...|..|+++|++.+|.|..|++.|.+...|..|++.+++
T Consensus         4 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C            4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHHHH
Confidence            67888888888888888888888775 78888888888888888888888887668888888888888888888887664

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=2.9e-16  Score=117.76  Aligned_cols=77  Identities=23%  Similarity=0.325  Sum_probs=68.0

Q ss_pred             HHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCC-----CCcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         348 NLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDI-----KNKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       348 ~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~-----~~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      +|.+|+++|++. ||.|.+|++.|.+...|..|+++|++.     +|.|.+|++.|.....|..|+++|++ .++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            456789999886 899999999999999999999877653     48999999999999999999999999 78999999


Q ss_pred             cccc
Q psy8466         421 SKEF  424 (431)
Q Consensus       421 ~~~f  424 (431)
                      +..|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            9875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.60  E-value=5.1e-16  Score=116.10  Aligned_cols=76  Identities=28%  Similarity=0.517  Sum_probs=68.5

Q ss_pred             Ccc--ccchhccCCchHHHHHHhhhCCC-cccccc--cccccCCHHHHHHHHHHhCCCCCcccc---cccccCChHHHHH
Q psy8466         334 NKC--DLCSKEFSHKSNLTKHMNLHQGI-RYKCDL--CSKEFSWKGHLTEHRKLHQDIKNKCDL---CSKEFSSKRILTE  405 (431)
Q Consensus       334 ~~C--~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~H~~~~~~C~~---C~~~F~~~~~L~~  405 (431)
                      |.|  +.|++.|.....|..|+++|++. ||.|+.  |++.|.+...|..|+++|++  |.|..   |++.|.+...|..
T Consensus         2 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~~   79 (85)
T 2j7j_A            2 YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLK   79 (85)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHHH
T ss_pred             ccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHHH
Confidence            578  88999999999999999998875 799988  99999999999999999988  88999   9999999999999


Q ss_pred             HHHhcC
Q psy8466         406 HMKLHQ  411 (431)
Q Consensus       406 H~~~H~  411 (431)
                      |+++||
T Consensus        80 H~~~hh   85 (85)
T 2j7j_A           80 HVAECH   85 (85)
T ss_dssp             HHHHCC
T ss_pred             HHHhcC
Confidence            999886

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=1e-15  Score=120.66  Aligned_cols=83  Identities=36%  Similarity=0.824  Sum_probs=70.3

Q ss_pred             hCCCCC-CCCchhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHH
Q psy8466         302 HQGLKN-KCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTE  378 (431)
Q Consensus       302 h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~  378 (431)
                      |.+.++ .| .|++.|.+...|..|++.|++.+ |.|++|++.|.....|..|+++|++. +|.|++|++.|.+...|..
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHH
Confidence            555554 88 78888888888888888888766 78999999999999999999998876 7999999999999999999


Q ss_pred             HHHHhCC
Q psy8466         379 HRKLHQD  385 (431)
Q Consensus       379 H~~~H~~  385 (431)
                      |+++|+.
T Consensus        84 H~~~~~~   90 (110)
T 2csh_A           84 HVTSCTK   90 (110)
T ss_dssp             HHHHHHH
T ss_pred             HHHHccc
Confidence            9988753

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.57  E-value=9.1e-16  Score=105.78  Aligned_cols=55  Identities=29%  Similarity=0.571  Sum_probs=48.7

Q ss_pred             CCccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         333 KNKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       333 ~~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      .|.|++||++|...+.|..|+++|+|+ ||.|++||++|.+.+.|..|+++|+|++
T Consensus         4 py~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            4 PFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            378999999999999999999999886 8999999999999999999999998875

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2.5e-15  Score=110.69  Aligned_cols=67  Identities=36%  Similarity=0.632  Sum_probs=56.8

Q ss_pred             Ccccccc--cccccCCHHHHHHHHH-HhCCCC-Ccccc--cccccCChHHHHHHHHhcCC-CCCccCccccccC
Q psy8466         359 IRYKCDL--CSKEFSWKGHLTEHRK-LHQDIK-NKCDL--CSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFS  425 (431)
Q Consensus       359 ~~~~C~~--C~~~f~~~~~L~~H~~-~H~~~~-~~C~~--C~~~F~~~~~L~~H~~~H~g-~~~~C~~C~~~f~  425 (431)
                      .+|.|..  |++.|.+...|..|++ +|.+.+ |.|++  |++.|.+...|..|+++|+| +||.|.+||+.|.
T Consensus         6 ~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            6 SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            3688876  8999998889999988 687766 88988  99999999999999999888 7899999998884

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.55  E-value=5e-15  Score=114.36  Aligned_cols=79  Identities=37%  Similarity=0.783  Sum_probs=63.4

Q ss_pred             CCCCc--hhhccCChhHHHHHHHHhcCCC-Cccc--cchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHH
Q psy8466         307 NKCDL--CSKEFSRKSYLTEHMKLHQGIK-NKCD--LCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHR  380 (431)
Q Consensus       307 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~C~--~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~  380 (431)
                      +.|..  |++.|.....|..|+++|++.+ |.|+  .|++.|.....|..|+++|++. +|.|++|++.|.+...|..|+
T Consensus        16 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   95 (100)
T 2ebt_A           16 HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHM   95 (100)
T ss_dssp             EECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHH
T ss_pred             eEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHH
Confidence            35765  8888888888888887777665 6885  5888888888888888888876 788888888888888888888


Q ss_pred             HHhCC
Q psy8466         381 KLHQD  385 (431)
Q Consensus       381 ~~H~~  385 (431)
                      ++|++
T Consensus        96 ~~H~~  100 (100)
T 2ebt_A           96 KRHQN  100 (100)
T ss_dssp             HHHCC
T ss_pred             HHhCC
Confidence            88864

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=4.8e-15  Score=113.38  Aligned_cols=75  Identities=16%  Similarity=0.155  Sum_probs=63.4

Q ss_pred             hhccCCchHHHHHHhhhCCC-ccccccccccc-CCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHH-HHhcCCCCC
Q psy8466         340 SKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEF-SWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEH-MKLHQGITY  415 (431)
Q Consensus       340 ~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f-~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H-~~~H~g~~~  415 (431)
                      ...|.....|..|+++|.+. +|.|+.|++.| .+...|..|+++| +++ |.|.+|++.|.....|..| +++|+++||
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            34667778888888887765 79999999999 8999999999999 665 8999999999999999999 888988764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.54  E-value=3.2e-15  Score=112.78  Aligned_cols=78  Identities=36%  Similarity=0.764  Sum_probs=61.5

Q ss_pred             CCCCc--hhhccCChhHHHHHHHHhcCCC-Cccc--cchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHH
Q psy8466         307 NKCDL--CSKEFSRKSYLTEHMKLHQGIK-NKCD--LCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHR  380 (431)
Q Consensus       307 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~C~--~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~  380 (431)
                      +.|+.  |++.|.+...|..|+++|++.+ |.|+  .|++.|.+...|..|+++|++. +|.|+.|++.|.+...|..|+
T Consensus         6 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   85 (89)
T 2wbs_A            6 HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHM   85 (89)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHG
T ss_pred             eeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHH
Confidence            46777  7777777777777777777665 6786  4888888888888888888775 788888888888888888888


Q ss_pred             HHhC
Q psy8466         381 KLHQ  384 (431)
Q Consensus       381 ~~H~  384 (431)
                      ++|.
T Consensus        86 ~~H~   89 (89)
T 2wbs_A           86 KRHF   89 (89)
T ss_dssp             GGGC
T ss_pred             HhhC
Confidence            8773

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.54  E-value=4.7e-16  Score=117.28  Aligned_cols=78  Identities=26%  Similarity=0.506  Sum_probs=64.8

Q ss_pred             CCCCchhhccCChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCCcccccccccccCCHHHHHHHHHHhC
Q psy8466         307 NKCDLCSKEFSRKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       307 ~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      +.|+.|++.|.+...|..|+++|++++ |.|+.|++.|.....|..|+++|++.+|.|+.|++.|.+...|..|++.++
T Consensus         4 ~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C            4 FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHHH
Confidence            478888888888888888888887766 788888888888888888888888778888888888888888888887543

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=4.3e-15  Score=114.38  Aligned_cols=75  Identities=19%  Similarity=0.178  Sum_probs=60.6

Q ss_pred             ccCCchHHHHHHhhhCCC-cccccccccccC-CHHHHHHHHHHhCC-CC-CcccccccccCChHHHHHHHHhcCC-CCCc
Q psy8466         342 EFSHKSNLTKHMNLHQGI-RYKCDLCSKEFS-WKGHLTEHRKLHQD-IK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYK  416 (431)
Q Consensus       342 ~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~-~~~~L~~H~~~H~~-~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~  416 (431)
                      .+.....+..|+++|.+. +|.|++|++.|. +...|..|+++|++ .+ |.|.+|++.|.+...|..|+++|++ +|+.
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            455566677888888875 788888888888 88888888888886 55 8888888888888888888888888 5543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.52  E-value=1.8e-15  Score=122.91  Aligned_cols=78  Identities=22%  Similarity=0.386  Sum_probs=65.9

Q ss_pred             CccccchhccC------CchHHHHHHhhhCC-CcccccccccccCCHHHHHHHHHHhCCCCCcccccccccCChHHHHHH
Q psy8466         334 NKCDLCSKEFS------HKSNLTKHMNLHQG-IRYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEH  406 (431)
Q Consensus       334 ~~C~~C~k~f~------~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~F~~~~~L~~H  406 (431)
                      +.|++|.+.|.      ....|..|++ |++ +||.|++||+.|.+...|..|+++| ..+|.|.+|++.|.+...|..|
T Consensus        42 ~~c~~~~~~~~~~~~~~~~~~l~~h~~-h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H  119 (129)
T 2wbt_A           42 LIRAIVKTLIHNPQLLDESSYLYRLLA-SKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDH  119 (129)
T ss_dssp             HHHHHHHHHHHCGGGTTTHHHHHHHHH-HHHHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHH
T ss_pred             ccchhhhcccCCCcccCCHHHHHHHHH-hCCCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHH
Confidence            46777766655      5667777775 555 5899999999999999999999999 6669999999999999999999


Q ss_pred             HHhcCCC
Q psy8466         407 MKLHQGI  413 (431)
Q Consensus       407 ~~~H~g~  413 (431)
                      +++|+|.
T Consensus       120 ~~~h~~~  126 (129)
T 2wbt_A          120 VCKKHNI  126 (129)
T ss_dssp             HHHTTCC
T ss_pred             HHHHCCc
Confidence            9999984

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=5.3e-15  Score=110.81  Aligned_cols=76  Identities=20%  Similarity=0.358  Sum_probs=65.7

Q ss_pred             HHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCC-----CcccccccccccCCHHHHHHHHHHhCCCC-Ccccccc
Q psy8466         322 LTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQG-----IRYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCS  394 (431)
Q Consensus       322 l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~-----~~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~  394 (431)
                      |..|+++|++++ |.|++|++.|.....|..|+++|++     .+|.|++|++.|.+...|..|+++|++.+ +.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            456888888877 7999999999999999999987665     36999999999999999999999998877 8999998


Q ss_pred             ccc
Q psy8466         395 KEF  397 (431)
Q Consensus       395 ~~F  397 (431)
                      ..|
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            876

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.6e-14  Score=105.78  Aligned_cols=59  Identities=41%  Similarity=0.728  Sum_probs=52.6

Q ss_pred             CcccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         359 IRYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       359 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      ++|.|++|++.|.+...|..|+++|++.+ |.|.+|++.|.....|..|+++|+| +||+|
T Consensus        17 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           17 RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            37999999999999999999999998776 8999999999999999999999998 78887

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.2e-14  Score=104.68  Aligned_cols=65  Identities=34%  Similarity=0.715  Sum_probs=57.0

Q ss_pred             Ccccc--chhccCCchHHHHHHh-hhCCC-cccccc--cccccCCHHHHHHHHHHhCCCC-CcccccccccC
Q psy8466         334 NKCDL--CSKEFSHKSNLTKHMN-LHQGI-RYKCDL--CSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFS  398 (431)
Q Consensus       334 ~~C~~--C~k~f~~~~~L~~H~~-~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~  398 (431)
                      |.|..  |++.|.+...|..|++ .|.+. +|.|++  |++.|.+...|..|+++|++++ |.|.+|++.|.
T Consensus         8 ~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            8 MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             EECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             ccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            66766  9999999999999998 68765 799998  9999999999999999998877 99999999884

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.47  E-value=4.2e-14  Score=105.52  Aligned_cols=77  Identities=31%  Similarity=0.501  Sum_probs=64.6

Q ss_pred             cccc--cccccccCChHHHHHHHHHhcCCC-Ccccc--cccccCCHHHHHHHHHHhcCCCCccCc---cCcccCCHhHHH
Q psy8466         171 RYKC--DLCSKKFSTKSYLTAHMKLHQGLK-NKCDL--CSKEFSSKSYLTEHMKLHQGIKNKCDL---CSKEFSTKSYLT  242 (431)
Q Consensus       171 ~~~C--~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~C~~---C~~~f~~~~~L~  242 (431)
                      ||.|  +.|++.|.+...|..|+++|.+.+ |.|+.  |++.|.+...|..|+++|++  +.|..   |++.|.....|.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~   78 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYL   78 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHH
Confidence            5788  888888888888888888887765 78877  88888888888888888887  78888   888888888888


Q ss_pred             HHHHHhc
Q psy8466         243 EHMKLHQ  249 (431)
Q Consensus       243 ~H~~~h~  249 (431)
                      .|++.|+
T Consensus        79 ~H~~~hh   85 (85)
T 2j7j_A           79 KHVAECH   85 (85)
T ss_dssp             HHHHHCC
T ss_pred             HHHHhcC
Confidence            8887764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.45  E-value=8.7e-14  Score=100.96  Aligned_cols=56  Identities=36%  Similarity=0.879  Sum_probs=47.4

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITY  415 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~  415 (431)
                      +|.|..|++.|.+...|..|+++|++.+ |.|.+|++.|.+...|..|+++|+| +||
T Consensus        17 ~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           17 PYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             SBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             CeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            7888888888888888888888888776 8888888888888888888888888 565

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=3.2e-14  Score=102.74  Aligned_cols=62  Identities=34%  Similarity=0.606  Sum_probs=51.5

Q ss_pred             HhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCCCC
Q psy8466         353 MNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGIT  414 (431)
Q Consensus       353 ~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g~~  414 (431)
                      .++|.+. ||.|++|++.|.....|..|+++|++.+ |.|.+|++.|.+...|..|+++|++.|
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4566665 7888888888888888888888888766 888889999988888988988888754

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=1.2e-13  Score=105.64  Aligned_cols=74  Identities=16%  Similarity=0.221  Sum_probs=65.1

Q ss_pred             hccCChhHHHHHHHHhcCCC-Cccccchhcc-CCchHHHHHHhhhCCC-cccccccccccCCHHHHHHH-HHHhCCCCC
Q psy8466         314 KEFSRKSYLTEHMKLHQGIK-NKCDLCSKEF-SHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEH-RKLHQDIKN  388 (431)
Q Consensus       314 ~~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f-~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H-~~~H~~~~~  388 (431)
                      ..|.....|..|++.|.+.+ |.|+.|++.| .....|..|+++| +. ||.|.+|++.|.+...|..| +++|++++|
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            46677888889988887766 7999999999 8999999999999 65 89999999999999999999 889998874

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.44  E-value=5.1e-14  Score=108.31  Aligned_cols=63  Identities=24%  Similarity=0.359  Sum_probs=54.1

Q ss_pred             cccccccccccCCHHHHHHHHH-Hh---CCCC-CcccccccccCChHHHHHH-HHhcCC-CCCccCcccc
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK-LH---QDIK-NKCDLCSKEFSSKRILTEH-MKLHQG-ITYKCGLCSK  422 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~-~H---~~~~-~~C~~C~~~F~~~~~L~~H-~~~H~g-~~~~C~~C~~  422 (431)
                      ||.|+.||+.|.+...|..|++ +|   .+++ |.|.+||+.|.+++.|..| +++|+| +||.|.++..
T Consensus        18 py~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           18 GYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             SEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            7999999999999999999987 58   4454 8999999999999999999 789998 8899987543

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=3.3e-14  Score=104.13  Aligned_cols=64  Identities=23%  Similarity=0.447  Sum_probs=56.2

Q ss_pred             HHHHHhhhCCC-cccccccccccCCHHHHHHHHH-HhCCC--CCcccccccccCChHHHHHHHHhcCC
Q psy8466         349 LTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRK-LHQDI--KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       349 L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~-~H~~~--~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.+|+++|++. ||.|++|++.|.+...|..|++ .|.+.  +|.|++|++.|.+...|..|+++|++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            45688999886 8999999999999999999987 67763  49999999999999999999999887

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=3.9e-14  Score=108.97  Aligned_cols=73  Identities=22%  Similarity=0.279  Sum_probs=64.4

Q ss_pred             ccCChhHHHHHHHHhcCCC-CccccchhccC-CchHHHHHHhhhCC-C-cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         315 EFSRKSYLTEHMKLHQGIK-NKCDLCSKEFS-HKSNLTKHMNLHQG-I-RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       315 ~f~~~~~l~~H~~~h~~~~-~~C~~C~k~f~-~~~~L~~H~~~h~~-~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      .+.....+..|+++|.+.+ |.|++|++.|. ....|..|+++|++ . +|.|.+|++.|.+...|..|+++|++.+
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~k   81 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAK   81 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCC
Confidence            4555667788999998877 89999999999 99999999999987 4 8999999999999999999999998876

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.39  E-value=2.4e-13  Score=97.41  Aligned_cols=57  Identities=32%  Similarity=0.463  Sum_probs=47.7

Q ss_pred             hCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         356 HQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       356 h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.+. +|.|++|++.|.+...|..|+++|++.+ |.|.+|++.|.+...|..|+++|++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   62 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG   62 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhC
Confidence            3443 7888888888888888888888888776 8888888888888888888888887

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.38  E-value=2.5e-13  Score=93.02  Aligned_cols=54  Identities=28%  Similarity=0.464  Sum_probs=42.3

Q ss_pred             CcccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         359 IRYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       359 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +||.|++|++.|.+...|..|+++|++.+ |.|++|++.|.....|..|+++|++
T Consensus         3 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            3 SSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             --CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            36888888888888888888888887666 7888888888888888888888774

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.37  E-value=3.9e-13  Score=92.02  Aligned_cols=53  Identities=30%  Similarity=0.619  Sum_probs=41.3

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ||.|+.|++.|.+...|..|+++|++.+ |.|++|++.|.+...|..|+++|++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            5777788888888888888877777765 7788888888888888888877776

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.37  E-value=3.6e-14  Score=115.12  Aligned_cols=77  Identities=23%  Similarity=0.400  Sum_probs=65.0

Q ss_pred             CCCchhhccC------ChhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCCcccccccccccCCHHHHHHHH
Q psy8466         308 KCDLCSKEFS------RKSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHR  380 (431)
Q Consensus       308 ~C~~C~~~f~------~~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~  380 (431)
                      .|..|++.|.      ....|..|+ .|++++ |.|++|++.|.....|..|+++| ..||.|++|++.|.+...|..|+
T Consensus        43 ~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~  120 (129)
T 2wbt_A           43 IRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHV  120 (129)
T ss_dssp             HHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHH
T ss_pred             cchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHH
Confidence            5666655554      667777777 566655 79999999999999999999999 67999999999999999999999


Q ss_pred             HHhCCC
Q psy8466         381 KLHQDI  386 (431)
Q Consensus       381 ~~H~~~  386 (431)
                      ++|++.
T Consensus       121 ~~h~~~  126 (129)
T 2wbt_A          121 CKKHNI  126 (129)
T ss_dssp             HHTTCC
T ss_pred             HHHCCc
Confidence            999875

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=2.2e-13  Score=96.40  Aligned_cols=59  Identities=29%  Similarity=0.657  Sum_probs=45.0

Q ss_pred             hhhCCC-cccccccccccCCHHHHHHHHHH-h-CCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         354 NLHQGI-RYKCDLCSKEFSWKGHLTEHRKL-H-QDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       354 ~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~-H-~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ++|++. ||.|+.|++.|.+...|..|+++ | .+.+ |.|++|++.|.+.+.|..|+++|+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            355554 78888888888888888888876 5 3544 7888888888888888888888776

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=4.7e-13  Score=97.85  Aligned_cols=61  Identities=41%  Similarity=0.761  Sum_probs=52.6

Q ss_pred             cCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccc
Q psy8466         330 QGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKC  390 (431)
Q Consensus       330 ~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C  390 (431)
                      .+.+ |.|++|++.|.....|..|+++|++. +|.|++|++.|.....|..|+++|++++ |.|
T Consensus        14 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           14 RERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3434 78999999999999999999998876 7999999999999999999999998877 776

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2e-15  Score=109.25  Aligned_cols=70  Identities=20%  Similarity=0.297  Sum_probs=59.4

Q ss_pred             CchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCCCcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         345 HKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       345 ~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      +...|..|+++|.+. ||.|++|++.|.+...|..      ..+|.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            345677888888875 7999999999988888876      5558999999999999999999999998 78999887

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=6.2e-13  Score=95.85  Aligned_cols=61  Identities=38%  Similarity=0.657  Sum_probs=53.4

Q ss_pred             HHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         327 KLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       327 ~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      ++|.+++ |.|++|++.|.....|..|+++|++. ||.|++|++.|.+...|..|+++|++.+
T Consensus         7 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            7 GIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             cccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4577766 79999999999999999999999876 8999999999999999999999998764

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.33  E-value=1.3e-12  Score=94.61  Aligned_cols=59  Identities=34%  Similarity=0.736  Sum_probs=51.3

Q ss_pred             hcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         329 HQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       329 h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      +.+.+ |.|+.|++.|.....|..|+++|++. +|.|.+|++.|.+...|..|+++|++++
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            34444 79999999999999999999999886 7999999999999999999999998876

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.33  E-value=7.1e-13  Score=98.23  Aligned_cols=53  Identities=28%  Similarity=0.533  Sum_probs=36.7

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHH-hcCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMK-LHQG  412 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~-~H~g  412 (431)
                      +|.|++||+.|.+...|..|+++|++++ |.|.+|++.|.+...|..|++ +|.+
T Consensus        28 ~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~   82 (85)
T 2lv2_A           28 CHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPS   82 (85)
T ss_dssp             TEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTT
T ss_pred             CEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcC
Confidence            5777777777777777777777776665 677777777777777777764 3544

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.31  E-value=7.3e-13  Score=101.81  Aligned_cols=65  Identities=22%  Similarity=0.273  Sum_probs=54.1

Q ss_pred             CCC-CccccchhccCCchHHHHHHh-hh---CCC-cccccccccccCCHHHHHHH-HHHhCCCC-Cccccccc
Q psy8466         331 GIK-NKCDLCSKEFSHKSNLTKHMN-LH---QGI-RYKCDLCSKEFSWKGHLTEH-RKLHQDIK-NKCDLCSK  395 (431)
Q Consensus       331 ~~~-~~C~~C~k~f~~~~~L~~H~~-~h---~~~-~~~C~~C~~~f~~~~~L~~H-~~~H~~~~-~~C~~C~~  395 (431)
                      |++ |.|+.|++.|...+.|..|++ +|   .+. ||.|++||++|.+...|..| +++|++++ |.|.++..
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            444 689999999999999999997 47   333 79999999999999999999 78999887 89988654

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.30  E-value=1.7e-12  Score=89.83  Aligned_cols=53  Identities=32%  Similarity=0.856  Sum_probs=40.5

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHH-HhcCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHM-KLHQG  412 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~-~~H~g  412 (431)
                      ||.|+.|++.|.+...|..|+++|++.+ |.|++|++.|.+...|..|+ ++|.|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            5777888888888888888877777665 77888888888888888886 56665

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.29  E-value=2.3e-12  Score=88.13  Aligned_cols=54  Identities=33%  Similarity=0.622  Sum_probs=48.4

Q ss_pred             CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         334 NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      |.|+.|++.|.....|..|+++|++. ||.|+.|++.|.+...|..|+++|++.+
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            68999999999999999999999886 8999999999999999999999988754

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=2.6e-12  Score=97.98  Aligned_cols=59  Identities=24%  Similarity=0.374  Sum_probs=46.6

Q ss_pred             cccccccccccCCHHHHHHHHHH-hCCCC---------CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKL-HQDIK---------NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~-H~~~~---------~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      .|.|+.|++.|.+...|..|+++ |.+.+         |.|.+|++.|.+...|..|+++|+| +||.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            36677777777777777777776 66554         7888888888888888888888888 788885

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=4.4e-13  Score=98.02  Aligned_cols=65  Identities=20%  Similarity=0.464  Sum_probs=54.3

Q ss_pred             HHHHHHHhcCCC-CccccchhccCCchHHHHHHh-hhCC--CcccccccccccCCHHHHHHHHHHhCCC
Q psy8466         322 LTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMN-LHQG--IRYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       322 l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~-~h~~--~~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      |.+|+++|++++ |.|++|++.|.....|..|++ .|.+  .+|.|++|++.|.+...|..|+++|++.
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~   71 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSY   71 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCC
Confidence            345788888877 799999999999999999987 5765  4799999999999999999999876653

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.8e-12  Score=92.84  Aligned_cols=59  Identities=27%  Similarity=0.406  Sum_probs=52.0

Q ss_pred             hcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         329 HQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       329 h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      |.+++ |.|++|++.|.....|..|+++|++. +|.|++|++.|.+...|..|+++|++++
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            44555 79999999999999999999999876 7999999999999999999999998765

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.28  E-value=2.4e-12  Score=95.36  Aligned_cols=53  Identities=26%  Similarity=0.566  Sum_probs=48.3

Q ss_pred             CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHH-HHhCCC
Q psy8466         334 NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHR-KLHQDI  386 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~-~~H~~~  386 (431)
                      |.|++|++.|.+...|.+|+++|++. ||.|++|+++|.+...|..|+ ++|.++
T Consensus        29 h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           29 HLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             EECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             EECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            78999999999999999999999986 899999999999999999997 478765

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.27  E-value=2.6e-12  Score=87.83  Aligned_cols=53  Identities=30%  Similarity=0.595  Sum_probs=45.6

Q ss_pred             CCccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCC
Q psy8466         333 KNKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       333 ~~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      .|.|++|++.|.+...|..|+++|++. ||.|++|++.|.+...|..|+++|++
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            378999999999999999999998875 79999999999999999999988864

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.26  E-value=2.1e-12  Score=91.26  Aligned_cols=59  Identities=32%  Similarity=0.680  Sum_probs=51.1

Q ss_pred             HHhcCCC-CccccchhccCCchHHHHHHhh-h-CC-CcccccccccccCCHHHHHHHHHHhCC
Q psy8466         327 KLHQGIK-NKCDLCSKEFSHKSNLTKHMNL-H-QG-IRYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       327 ~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~-h-~~-~~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      ++|++++ |.|+.|++.|.+...|..|+++ | .+ .||.|+.|++.|.+...|..|+++|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            4567766 7999999999999999999998 6 34 489999999999999999999998876

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=4.6e-12  Score=92.73  Aligned_cols=57  Identities=21%  Similarity=0.525  Sum_probs=45.6

Q ss_pred             hCCC-cccccccccccCCHHHHHHHHHHhCC----CCCcccccccccCChHHHHHHHHhcCC
Q psy8466         356 HQGI-RYKCDLCSKEFSWKGHLTEHRKLHQD----IKNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       356 h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~----~~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |++. ||.|.+|++.|.+...|..|+++|++    .+|.|.+|++.|.....|..|++.++.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   63 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHP   63 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTST
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCC
Confidence            5554 78888888888888888888888874    348888899999888889889855443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.21  E-value=3.3e-12  Score=92.23  Aligned_cols=63  Identities=30%  Similarity=0.661  Sum_probs=46.8

Q ss_pred             HHHHHhh-hCCC-ccccc--ccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcC
Q psy8466         349 LTKHMNL-HQGI-RYKCD--LCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       349 L~~H~~~-h~~~-~~~C~--~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      |..|+.. |.+. +|.|+  .|++.|.+...|..|+++|.+.+ |.|.+|++.|.+...|..|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            4444433 4443 68886  48888888888888888887766 888888888888888888888874

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=4.1e-14  Score=102.27  Aligned_cols=69  Identities=20%  Similarity=0.324  Sum_probs=54.9

Q ss_pred             hhHHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCCcccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         319 KSYLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       319 ~~~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      ...|..|+++|++.+ |.|++|++.|.....|..      ..+|.|+.|++.|.+...|..|+++|++++ |.|++|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            345667777887776 688888888888877766      557888888888888888888888888776 888877

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=2e-11  Score=84.25  Aligned_cols=54  Identities=28%  Similarity=0.720  Sum_probs=46.7

Q ss_pred             CCccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHH-HHhCCC
Q psy8466         333 KNKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHR-KLHQDI  386 (431)
Q Consensus       333 ~~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~-~~H~~~  386 (431)
                      .|.|+.|++.|.+...|..|+++|++. ||.|+.|++.|.+...|..|+ ++|.+.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            378999999999999999999998876 799999999999999999997 577764

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.15  E-value=3e-11  Score=91.94  Aligned_cols=59  Identities=25%  Similarity=0.405  Sum_probs=48.1

Q ss_pred             CCccccchhccCCchHHHHHHhh-hCCC-c--------ccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         333 KNKCDLCSKEFSHKSNLTKHMNL-HQGI-R--------YKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       333 ~~~C~~C~k~f~~~~~L~~H~~~-h~~~-~--------~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      .+.|+.|++.|.....|..|+++ |.+. +        |.|+.|++.|.+...|..|+++|++++ |.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            35688888888888888888877 6665 3        889999999999999999999998877 8885

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=2.2e-11  Score=89.08  Aligned_cols=59  Identities=25%  Similarity=0.608  Sum_probs=49.7

Q ss_pred             hcCCC-CccccchhccCCchHHHHHHhhhCC----CcccccccccccCCHHHHHHHHH-HhCCCC
Q psy8466         329 HQGIK-NKCDLCSKEFSHKSNLTKHMNLHQG----IRYKCDLCSKEFSWKGHLTEHRK-LHQDIK  387 (431)
Q Consensus       329 h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~----~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~  387 (431)
                      |++++ |.|++|++.|.....|..|+++|++    .+|.|++|++.|.+...|..|++ .|.+.+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            56666 7999999999999999999999884    48999999999999999999985 565554

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.13  E-value=1e-11  Score=89.51  Aligned_cols=63  Identities=29%  Similarity=0.735  Sum_probs=49.9

Q ss_pred             HHHHHH-HhcCCC-Cccc--cchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhC
Q psy8466         322 LTEHMK-LHQGIK-NKCD--LCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       322 l~~H~~-~h~~~~-~~C~--~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      |..|+. +|.+.+ |.|+  .|++.|.....|..|+++|++. +|.|++|++.|.+...|..|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            344433 345555 7897  5999999999999999998876 7999999999999999999998874

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=2.9e-11  Score=78.52  Aligned_cols=42  Identities=26%  Similarity=0.336  Sum_probs=28.7

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            555666655 6777777777777777777777766 66777665

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.08  E-value=3e-11  Score=78.46  Aligned_cols=42  Identities=24%  Similarity=0.339  Sum_probs=27.6

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            555666555 6666666666666666666666666 66666665

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.08  E-value=2.7e-11  Score=78.70  Aligned_cols=42  Identities=31%  Similarity=0.336  Sum_probs=29.1

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            556666655 6777777777777777777777776 66777666

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.6e-11  Score=78.06  Aligned_cols=42  Identities=24%  Similarity=0.339  Sum_probs=28.4

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            555666655 6777777777777777777777766 66777665

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3.5e-11  Score=78.11  Aligned_cols=42  Identities=29%  Similarity=0.278  Sum_probs=26.8

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|++|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455565554 6666666666666666666666666 56666665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=3e-11  Score=78.48  Aligned_cols=42  Identities=24%  Similarity=0.365  Sum_probs=26.8

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++.+ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455566555 6666666666666666666666666 56666665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.7e-11  Score=78.65  Aligned_cols=42  Identities=21%  Similarity=0.360  Sum_probs=25.2

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555554 5666666666666666666666665 56666655

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=2.5e-11  Score=78.01  Aligned_cols=42  Identities=26%  Similarity=0.230  Sum_probs=24.8

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            344555544 5666666666666666666666665 56666655

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=2.9e-11  Score=78.57  Aligned_cols=42  Identities=24%  Similarity=0.330  Sum_probs=26.7

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            455565555 6666666666666666666666666 56666665

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.6e-11  Score=78.12  Aligned_cols=42  Identities=31%  Similarity=0.356  Sum_probs=27.5

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            455666555 6666666666666666666666666 66666665

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.06  E-value=3.1e-11  Score=78.40  Aligned_cols=42  Identities=24%  Similarity=0.204  Sum_probs=27.2

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            455666555 6666666666666666666666666 56666665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.7e-11  Score=78.00  Aligned_cols=42  Identities=21%  Similarity=0.248  Sum_probs=26.2

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            555565554 6666666666666666666666666 56666655

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3e-11  Score=78.50  Aligned_cols=42  Identities=24%  Similarity=0.293  Sum_probs=25.3

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++.+ |.|.+|++.|.+.+.|..|+++|+| +||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            445555544 5666666666666666666666665 56666655

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.4e-11  Score=78.16  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=27.8

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            555666555 6666666677666677777666666 66776665

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.4e-11  Score=78.20  Aligned_cols=42  Identities=26%  Similarity=0.377  Sum_probs=27.8

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            555666555 6666677777766777777666666 66777665

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=3.3e-11  Score=78.24  Aligned_cols=42  Identities=24%  Similarity=0.259  Sum_probs=27.1

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455566555 6666666666666666666666666 56666665

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.8e-11  Score=78.64  Aligned_cols=42  Identities=24%  Similarity=0.363  Sum_probs=25.2

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|++|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            445555554 5666666666666666666666665 56666655

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.5e-11  Score=78.15  Aligned_cols=42  Identities=26%  Similarity=0.362  Sum_probs=25.3

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            445555554 5666666666666666666666666 56666655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.9e-11  Score=78.54  Aligned_cols=42  Identities=24%  Similarity=0.407  Sum_probs=24.0

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++.+ |.|++|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            445555544 5566666666666666666666655 55666555

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.3e-11  Score=78.27  Aligned_cols=42  Identities=26%  Similarity=0.381  Sum_probs=25.0

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++.+ |.|.+|++.|.+.+.|..|+++|+| +||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            445555554 5666666666666666666666665 56666655

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.4e-11  Score=78.20  Aligned_cols=42  Identities=24%  Similarity=0.293  Sum_probs=27.6

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455666555 6666666666666666666666666 66776665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.6e-11  Score=78.76  Aligned_cols=42  Identities=26%  Similarity=0.336  Sum_probs=24.3

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555544 5566666666666666666666655 55666554

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.7e-11  Score=78.66  Aligned_cols=42  Identities=26%  Similarity=0.338  Sum_probs=25.3

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455555554 5666666666666666666666665 56666655

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=3.6e-11  Score=78.07  Aligned_cols=42  Identities=24%  Similarity=0.211  Sum_probs=27.8

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            555666555 6666667777766777777766666 56777665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.1e-11  Score=77.83  Aligned_cols=42  Identities=24%  Similarity=0.378  Sum_probs=26.3

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455565555 6666666666666666666666666 56666655

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=4.1e-11  Score=77.85  Aligned_cols=42  Identities=26%  Similarity=0.320  Sum_probs=27.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455666555 6677777777777777777777666 66777665

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=3.2e-11  Score=78.35  Aligned_cols=42  Identities=21%  Similarity=0.390  Sum_probs=25.0

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++.+ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555554 5666666666666666666666665 55666655

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.04  E-value=2.8e-11  Score=78.57  Aligned_cols=42  Identities=26%  Similarity=0.331  Sum_probs=25.4

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++.+ |.|.+|++.|.+.+.|..|+++|+| +||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455555554 5666666666666666666666665 56666655

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=6.7e-11  Score=83.41  Aligned_cols=51  Identities=22%  Similarity=0.346  Sum_probs=40.9

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC-Cccc-ccccccCChHHHHHHHHhcCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD-LCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~-~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ||.|+.|++.|. ...|..|+++ ++++ |.|+ .|++.|..++.|..|+++|..
T Consensus        10 ~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A           10 TQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             EEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            688888888888 8888888877 6665 7888 888888888888888888765

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.04  E-value=3.5e-11  Score=78.16  Aligned_cols=42  Identities=29%  Similarity=0.387  Sum_probs=25.7

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455555554 5666666666666666666666666 56666655

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.3e-11  Score=77.70  Aligned_cols=42  Identities=24%  Similarity=0.336  Sum_probs=23.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++.+ |.|++|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            445555544 5555555556555566666655555 55666555

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.1e-11  Score=78.38  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=24.7

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            445555544 5666666666666666666666655 55666555

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.1e-11  Score=78.40  Aligned_cols=42  Identities=21%  Similarity=0.274  Sum_probs=24.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            455555554 5666666666666666666666655 55666555

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.04  E-value=1.2e-10  Score=78.45  Aligned_cols=39  Identities=31%  Similarity=0.491  Sum_probs=27.1

Q ss_pred             CcccccccccCChHHHHHHHH-hcCC-CCCccCccccccCC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMK-LHQG-ITYKCGLCSKEFSC  426 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~-~H~g-~~~~C~~C~~~f~~  426 (431)
                      |.|.+|++.|.+...|..|++ +|++ +||.|.+|++.|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           13 YICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             eECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            667777777777777777765 6666 66777777777765

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=4.9e-11  Score=77.41  Aligned_cols=42  Identities=21%  Similarity=0.245  Sum_probs=26.2

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            445565554 6666666666666666666666666 56666655

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=4.3e-11  Score=77.69  Aligned_cols=42  Identities=24%  Similarity=0.242  Sum_probs=25.3

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||+|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555554 5666666666666666666666666 56666655

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=3.5e-11  Score=78.17  Aligned_cols=42  Identities=24%  Similarity=0.292  Sum_probs=24.7

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            445555544 5666666666666666666666665 55666555

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=4.1e-11  Score=77.81  Aligned_cols=42  Identities=29%  Similarity=0.388  Sum_probs=25.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            445555555 5666666666666666666666666 56666655

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=3.3e-11  Score=78.25  Aligned_cols=42  Identities=26%  Similarity=0.321  Sum_probs=23.8

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            444555544 5555566666666666666655555 55666555

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=4.2e-11  Score=77.75  Aligned_cols=42  Identities=24%  Similarity=0.357  Sum_probs=25.2

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455555554 5666666666666666666666665 56666655

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=3.4e-11  Score=78.18  Aligned_cols=42  Identities=29%  Similarity=0.336  Sum_probs=25.0

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|++|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            445555554 5666666666666666666666665 55666655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=4e-11  Score=77.85  Aligned_cols=42  Identities=24%  Similarity=0.309  Sum_probs=24.8

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||+|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555544 5666666666666666666666665 55666555

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.03  E-value=3.8e-11  Score=77.98  Aligned_cols=42  Identities=21%  Similarity=0.288  Sum_probs=24.1

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||+|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            445555544 5566666666666666666666655 55666555

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=3e-11  Score=78.46  Aligned_cols=42  Identities=24%  Similarity=0.347  Sum_probs=27.0

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++.+ |.|.+|++.|.+.+.|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            455566555 6666666666666666666666666 56666665

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.01  E-value=6.3e-11  Score=76.91  Aligned_cols=42  Identities=24%  Similarity=0.313  Sum_probs=24.0

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            344555544 5566666666666666666666655 55666555

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.5e-11  Score=77.22  Aligned_cols=42  Identities=21%  Similarity=0.230  Sum_probs=25.3

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            344555554 5666666666666666666666665 56666655

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=5.8e-11  Score=77.06  Aligned_cols=42  Identities=24%  Similarity=0.343  Sum_probs=24.4

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            445555544 5666666666666666666666665 55666543

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=3e-11  Score=78.46  Aligned_cols=42  Identities=24%  Similarity=0.346  Sum_probs=26.0

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            455555554 6666666666666666666666666 56666655

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.00  E-value=1.7e-10  Score=82.79  Aligned_cols=51  Identities=27%  Similarity=0.586  Sum_probs=38.6

Q ss_pred             cccccc--cccccCCHHHHHHHHHHhCCCC-Ccccc--cccccCChHHHHHHHHhc
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHRKLHQDIK-NKCDL--CSKEFSSKRILTEHMKLH  410 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~~-~~C~~--C~~~F~~~~~L~~H~~~H  410 (431)
                      +|.|..  |++.|.....|..|+++|++.+ |.|.+  |++.|.....|..|+++|
T Consensus        17 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           17 SHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            577777  7777777777777777777666 77754  888888777787777765

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.1e-11  Score=76.48  Aligned_cols=42  Identities=21%  Similarity=0.263  Sum_probs=26.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHH-hcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMK-LHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~-~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|++ +|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            455566555 666666666666666666666 6666 56666665

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.99  E-value=1.5e-11  Score=85.60  Aligned_cols=51  Identities=18%  Similarity=0.367  Sum_probs=35.3

Q ss_pred             HHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCccccccCCCCCC
Q psy8466         377 TEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEFSCKSNL  430 (431)
Q Consensus       377 ~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C~~~f~~~~~l  430 (431)
                      ..|+++|++++ |.|+.||+.|.+...|.   ++|+| +||.|.+||+.|....++
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            45666676666 77777777777766665   66777 677777777777766554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.99  E-value=9.6e-11  Score=76.04  Aligned_cols=42  Identities=24%  Similarity=0.348  Sum_probs=25.2

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            445555554 5666666666666666666666666 56666543

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.98  E-value=1.5e-10  Score=74.28  Aligned_cols=42  Identities=26%  Similarity=0.350  Sum_probs=35.0

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56777775 7889889999988888999988888776 888877

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.8e-10  Score=74.61  Aligned_cols=43  Identities=28%  Similarity=0.387  Sum_probs=35.4

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            367778775 7888888888888888888888888776 888877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.98  E-value=2e-10  Score=74.51  Aligned_cols=43  Identities=28%  Similarity=0.454  Sum_probs=35.4

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467778775 7888888888888888888888888776 888877

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.98  E-value=1.7e-10  Score=74.79  Aligned_cols=43  Identities=26%  Similarity=0.396  Sum_probs=35.8

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367788775 7889889999998888999988888777 888877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=2e-10  Score=74.41  Aligned_cols=43  Identities=30%  Similarity=0.524  Sum_probs=35.4

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367778775 7888888888888888888888888776 888877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1.8e-10  Score=74.66  Aligned_cols=43  Identities=28%  Similarity=0.535  Sum_probs=34.8

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 888877

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.7e-10  Score=74.76  Aligned_cols=43  Identities=26%  Similarity=0.479  Sum_probs=35.3

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            367778775 7888888888888888888888888776 888877

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.9e-10  Score=74.55  Aligned_cols=43  Identities=28%  Similarity=0.389  Sum_probs=35.8

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            367778775 7889999999999889999988888776 888877

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.3e-10  Score=74.21  Aligned_cols=43  Identities=26%  Similarity=0.440  Sum_probs=35.0

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 888877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.7e-10  Score=74.86  Aligned_cols=42  Identities=26%  Similarity=0.441  Sum_probs=34.6

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            67777775 7888888888888888888888888776 888877

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.96  E-value=1.7e-10  Score=74.78  Aligned_cols=42  Identities=31%  Similarity=0.407  Sum_probs=32.6

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66777765 7888888888888888888888887766 788776

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.8e-10  Score=74.68  Aligned_cols=43  Identities=30%  Similarity=0.486  Sum_probs=33.4

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            366777765 7888888888888888888888887766 788776

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.5e-10  Score=74.03  Aligned_cols=43  Identities=26%  Similarity=0.435  Sum_probs=35.6

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477788875 7888888888888888888888888776 888876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.7e-10  Score=74.82  Aligned_cols=42  Identities=26%  Similarity=0.425  Sum_probs=34.0

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67777775 7888888888888888888888888776 888876

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.96  E-value=1.9e-10  Score=74.59  Aligned_cols=43  Identities=23%  Similarity=0.276  Sum_probs=33.7

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|+.|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            367777765 7888888888888888888888887776 788776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=2.4e-10  Score=74.07  Aligned_cols=43  Identities=26%  Similarity=0.460  Sum_probs=35.4

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467778775 7888888888888888888888888776 888877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.4e-10  Score=74.12  Aligned_cols=42  Identities=29%  Similarity=0.328  Sum_probs=34.0

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            66777775 7888888888888888888888888776 888877

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.3e-10  Score=74.21  Aligned_cols=43  Identities=30%  Similarity=0.482  Sum_probs=35.5

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            367778775 7888888888888888888888888776 888877

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.7e-10  Score=74.77  Aligned_cols=43  Identities=28%  Similarity=0.423  Sum_probs=35.7

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            377788775 7888888888888888888888888776 888877

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.3e-10  Score=74.17  Aligned_cols=43  Identities=30%  Similarity=0.532  Sum_probs=35.9

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            367788775 7889999999999999999988888877 888877

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.1e-10  Score=74.41  Aligned_cols=42  Identities=26%  Similarity=0.334  Sum_probs=34.0

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66777775 7888888888888888888888888776 888876

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.9e-10  Score=74.62  Aligned_cols=43  Identities=21%  Similarity=0.405  Sum_probs=35.0

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 888877

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=2.2e-10  Score=74.25  Aligned_cols=43  Identities=28%  Similarity=0.459  Sum_probs=34.1

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367777775 7888888888888888888888888766 888777

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.95  E-value=1.8e-10  Score=74.73  Aligned_cols=43  Identities=30%  Similarity=0.404  Sum_probs=35.9

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++||+.|.+.+.|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            477788875 7889999999999999999988888776 888877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=1.9e-10  Score=74.56  Aligned_cols=43  Identities=26%  Similarity=0.438  Sum_probs=35.7

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788875 7888889888988888888888888776 888877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.4e-10  Score=74.04  Aligned_cols=43  Identities=21%  Similarity=0.362  Sum_probs=34.3

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 888776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.1e-10  Score=74.32  Aligned_cols=43  Identities=28%  Similarity=0.431  Sum_probs=34.7

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 888877

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.5e-10  Score=73.97  Aligned_cols=43  Identities=26%  Similarity=0.458  Sum_probs=35.1

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467778775 7888888888888888888888888776 888876

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.2e-10  Score=74.31  Aligned_cols=42  Identities=26%  Similarity=0.385  Sum_probs=34.1

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66777775 7888888888888888888888888776 888877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.94  E-value=1.8e-10  Score=74.62  Aligned_cols=43  Identities=28%  Similarity=0.495  Sum_probs=34.1

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 888776

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.1e-10  Score=74.34  Aligned_cols=42  Identities=21%  Similarity=0.312  Sum_probs=32.7

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56677765 7888888888888888888888887766 788776

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.94  E-value=2.7e-10  Score=72.19  Aligned_cols=40  Identities=25%  Similarity=0.360  Sum_probs=27.1

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||+|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445666655 6777777777777777777777776 667663

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.94  E-value=2.2e-10  Score=74.26  Aligned_cols=43  Identities=33%  Similarity=0.527  Sum_probs=34.5

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 888876

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=2.8e-10  Score=73.72  Aligned_cols=42  Identities=21%  Similarity=0.163  Sum_probs=35.2

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67778775 7888888888888888888888888777 888877

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=3e-10  Score=73.62  Aligned_cols=42  Identities=21%  Similarity=0.317  Sum_probs=35.3

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67778775 7889999999999999999988888877 888877

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.3e-10  Score=74.17  Aligned_cols=43  Identities=30%  Similarity=0.477  Sum_probs=34.4

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      .|+++|++. ||.|++||+.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 888877

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.4e-10  Score=74.09  Aligned_cols=43  Identities=23%  Similarity=0.354  Sum_probs=35.2

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367778775 7888888888888888888888888776 888877

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.7e-10  Score=73.84  Aligned_cols=43  Identities=28%  Similarity=0.401  Sum_probs=35.4

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            367778776 7888888888888888888888888776 888877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.6e-10  Score=73.89  Aligned_cols=43  Identities=23%  Similarity=0.435  Sum_probs=34.2

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777775 7888888888888888888888888776 888776

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.93  E-value=2.4e-10  Score=74.07  Aligned_cols=43  Identities=26%  Similarity=0.508  Sum_probs=34.5

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 888877

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.5e-10  Score=74.02  Aligned_cols=42  Identities=26%  Similarity=0.387  Sum_probs=33.7

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66777765 7888888888888888888888887766 888877

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=2.2e-10  Score=74.23  Aligned_cols=42  Identities=26%  Similarity=0.396  Sum_probs=34.7

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            67777775 7888888888888888888888888776 888877

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=2.1e-10  Score=74.39  Aligned_cols=40  Identities=23%  Similarity=0.302  Sum_probs=24.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            455565555 6666666666666666666666666 566664

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.92  E-value=2.5e-10  Score=73.98  Aligned_cols=40  Identities=25%  Similarity=0.370  Sum_probs=26.4

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            555666555 6677777777777777777766666 566665

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.92  E-value=2.3e-10  Score=74.20  Aligned_cols=40  Identities=25%  Similarity=0.360  Sum_probs=24.4

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455555554 5666666666666666666666666 566664

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.92  E-value=2e-10  Score=72.84  Aligned_cols=39  Identities=23%  Similarity=0.358  Sum_probs=22.6

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            344555544 5666666666666666666666665 55655

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.92  E-value=6e-10  Score=71.79  Aligned_cols=40  Identities=20%  Similarity=0.361  Sum_probs=26.6

Q ss_pred             HhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCccc
Q psy8466         382 LHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLCS  421 (431)
Q Consensus       382 ~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C~  421 (431)
                      +|++++ |.|.+|++.|.....|..|+++|++ +||.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            355554 6677777777777777777777766 667777665

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.92  E-value=3.9e-10  Score=73.05  Aligned_cols=42  Identities=31%  Similarity=0.449  Sum_probs=34.5

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            66777775 7888888888888888888888888776 888877

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.91  E-value=1.5e-10  Score=77.98  Aligned_cols=45  Identities=20%  Similarity=0.287  Sum_probs=23.0

Q ss_pred             cccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         368 KEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       368 ~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +.|.....|..|+++|++++ |.|.+|++.|...+.|..|+++|+|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   49 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            34444444555555555444 4555555555555555555555555

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.8e-10  Score=73.72  Aligned_cols=40  Identities=25%  Similarity=0.298  Sum_probs=26.7

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666555 6677777777777777777777766 667665

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=3.2e-10  Score=73.49  Aligned_cols=40  Identities=25%  Similarity=0.351  Sum_probs=26.7

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666555 6677777777777777777777766 667665

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.6e-10  Score=73.89  Aligned_cols=40  Identities=25%  Similarity=0.357  Sum_probs=24.5

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            455555554 5666666666666666666666666 566664

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=1.9e-10  Score=74.58  Aligned_cols=43  Identities=30%  Similarity=0.489  Sum_probs=33.0

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            366777765 7888888888888888888888887766 788776

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.91  E-value=2.9e-10  Score=73.69  Aligned_cols=40  Identities=25%  Similarity=0.375  Sum_probs=26.6

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            455666555 6677777777777777777777766 667665

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.2e-10  Score=72.94  Aligned_cols=40  Identities=23%  Similarity=0.348  Sum_probs=27.8

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|++ +||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556666655 6777777777777777777777776 667774

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4.1e-10  Score=72.99  Aligned_cols=40  Identities=28%  Similarity=0.409  Sum_probs=26.3

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455666555 6666677777776777777766666 566665

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3e-10  Score=73.64  Aligned_cols=40  Identities=25%  Similarity=0.392  Sum_probs=26.1

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555666555 6666666666666666666666666 566664

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.2e-10  Score=73.46  Aligned_cols=42  Identities=24%  Similarity=0.336  Sum_probs=34.7

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56777775 7888888888888888888888888776 888877

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.9e-10  Score=73.64  Aligned_cols=40  Identities=25%  Similarity=0.340  Sum_probs=25.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566555 6666666666666666666666666 566664

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.2e-10  Score=73.45  Aligned_cols=40  Identities=28%  Similarity=0.390  Sum_probs=27.0

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666655 6777777777777777777777766 667765

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.90  E-value=3.4e-10  Score=79.71  Aligned_cols=51  Identities=22%  Similarity=0.332  Sum_probs=43.8

Q ss_pred             CccccchhccCCchHHHHHHhhhCCC-ccccc-ccccccCCHHHHHHHHHHhCCC
Q psy8466         334 NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCD-LCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~-~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      |.|+.|++.|. ...|..|+++ ++. ||.|+ .||+.|...+.|..|+++|...
T Consensus        11 ~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A           11 QPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             EECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSS
T ss_pred             eeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhccc
Confidence            68999999999 8899999888 654 89999 8999999999999999888654

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=3.5e-10  Score=73.33  Aligned_cols=40  Identities=33%  Similarity=0.492  Sum_probs=26.7

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            555666655 6677777777777777777777766 667665

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=4e-10  Score=73.00  Aligned_cols=43  Identities=26%  Similarity=0.414  Sum_probs=34.4

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367778775 7888888888888888888888888776 888765

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.90  E-value=2.4e-10  Score=74.07  Aligned_cols=40  Identities=23%  Similarity=0.390  Sum_probs=25.1

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455565555 6666666666666666666666666 566664

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3e-10  Score=73.61  Aligned_cols=40  Identities=30%  Similarity=0.448  Sum_probs=23.7

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555544 5666666666666666666666665 556664

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2.8e-10  Score=73.76  Aligned_cols=40  Identities=23%  Similarity=0.399  Sum_probs=23.4

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            445555544 5666666666666666666666665 556654

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.6e-10  Score=73.26  Aligned_cols=40  Identities=23%  Similarity=0.392  Sum_probs=26.0

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            555666555 6666666666666666666666666 566664

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=2e-10  Score=74.48  Aligned_cols=43  Identities=26%  Similarity=0.449  Sum_probs=32.3

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677765 6888888888888888888887777766 777776

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.89  E-value=3.8e-10  Score=72.31  Aligned_cols=40  Identities=30%  Similarity=0.470  Sum_probs=26.2

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            555666555 6676777777777777777766666 566663

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.89  E-value=9.7e-10  Score=73.93  Aligned_cols=40  Identities=38%  Similarity=0.649  Sum_probs=32.8

Q ss_pred             cccccccccccCCHHHHHHHHH-HhCCCC-CcccccccccCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK-LHQDIK-NKCDLCSKEFSS  399 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~-~H~~~~-~~C~~C~~~F~~  399 (431)
                      ||.|++|++.|.+...|..|++ +|++++ |.|.+|++.|.+
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           12 PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            7888888888888888888876 787766 888888888865

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=2.9e-10  Score=73.68  Aligned_cols=40  Identities=25%  Similarity=0.404  Sum_probs=24.5

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            455555554 6666666666666666666666666 566664

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3e-10  Score=73.64  Aligned_cols=40  Identities=30%  Similarity=0.413  Sum_probs=24.2

Q ss_pred             HHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         381 KLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       381 ~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      ++|++++ |.|.+|++.|.+...|..|+++|++ +||.|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            3455544 5666666666666666666666666 56666655

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=5.5e-10  Score=72.66  Aligned_cols=42  Identities=24%  Similarity=0.310  Sum_probs=34.0

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHH-HhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRK-LHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~-~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|++ +|++++ |.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            67777775 7888888888888888888888 888776 888877

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.4e-10  Score=73.40  Aligned_cols=40  Identities=25%  Similarity=0.399  Sum_probs=26.2

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|++ +||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            455566555 6666667777766777777666666 566665

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.88  E-value=6.1e-10  Score=72.88  Aligned_cols=35  Identities=31%  Similarity=0.553  Sum_probs=22.0

Q ss_pred             CcccccccccCChHHHHHHHHhcCC-CCCccCcccc
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLCSK  422 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C~~  422 (431)
                      |.|.+|++.|.+...|..|+++|++ +||.|.+|++
T Consensus        13 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           13 VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             eeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            5666666666666666666666666 5666666654

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=6.3e-10  Score=72.05  Aligned_cols=42  Identities=26%  Similarity=0.396  Sum_probs=34.8

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67778775 7888888888888888888888888776 888765

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.3e-10  Score=72.61  Aligned_cols=39  Identities=28%  Similarity=0.345  Sum_probs=25.2

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            455666555 6666666666666666666666666 56666

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=4.2e-10  Score=72.10  Aligned_cols=39  Identities=26%  Similarity=0.393  Sum_probs=23.5

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            445555554 5666666666666666666666665 55665

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.88  E-value=3.4e-10  Score=73.33  Aligned_cols=40  Identities=25%  Similarity=0.268  Sum_probs=26.5

Q ss_pred             HHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         381 KLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       381 ~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      ++|++++ |.|.+|++.|.+...|..|+++|+| +||.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3455555 6677777777777777777777666 66777665

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.87  E-value=8.8e-10  Score=78.98  Aligned_cols=50  Identities=30%  Similarity=0.734  Sum_probs=43.7

Q ss_pred             Ccccc--chhccCCchHHHHHHhhhCCC-cccccc--cccccCCHHHHHHHHHHh
Q psy8466         334 NKCDL--CSKEFSHKSNLTKHMNLHQGI-RYKCDL--CSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       334 ~~C~~--C~k~f~~~~~L~~H~~~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~H  383 (431)
                      |.|..  |++.|.....|..|+++|++. ||.|.+  |++.|.....|..|+++|
T Consensus        18 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             EECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             eeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            68888  999999999999999999876 799965  999999999999998876

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.87  E-value=3.2e-10  Score=73.47  Aligned_cols=40  Identities=25%  Similarity=0.372  Sum_probs=23.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|+| +||.|.
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            445555554 5666666666666666666666665 566664

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=3.5e-10  Score=73.24  Aligned_cols=40  Identities=28%  Similarity=0.442  Sum_probs=24.5

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.....|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455555554 6666666666666666666666666 566664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.86  E-value=4.1e-10  Score=72.95  Aligned_cols=40  Identities=20%  Similarity=0.363  Sum_probs=23.4

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555544 5666666666666666666666665 556654

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.85  E-value=4.5e-10  Score=72.77  Aligned_cols=40  Identities=28%  Similarity=0.312  Sum_probs=23.4

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            445555544 5666666666666666666666665 556654

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=4.9e-10  Score=71.01  Aligned_cols=39  Identities=21%  Similarity=0.442  Sum_probs=24.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            445565555 6666666666666666666666666 56665

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=5.9e-10  Score=72.17  Aligned_cols=40  Identities=28%  Similarity=0.423  Sum_probs=26.2

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.....|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666555 6666666666666667777666666 566664

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.84  E-value=5.9e-10  Score=75.00  Aligned_cols=48  Identities=21%  Similarity=0.250  Sum_probs=41.7

Q ss_pred             hhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         340 SKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       340 ~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      ++.|.....|..|+++|++. ||.|++||+.|.+...|..|+++|++++
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k   51 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTS
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            46788888889999999886 7999999999999999999999998876

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.84  E-value=6.5e-10  Score=70.39  Aligned_cols=39  Identities=15%  Similarity=0.182  Sum_probs=24.0

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            344555554 6666666666666666666666666 56655

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.84  E-value=6.2e-10  Score=71.31  Aligned_cols=39  Identities=18%  Similarity=0.320  Sum_probs=24.1

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|++ +||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            455555554 6666666666666666666666666 56665

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=5.1e-10  Score=72.53  Aligned_cols=40  Identities=23%  Similarity=0.390  Sum_probs=26.6

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|.+++ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666555 6677777777777777777777766 666664

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.83  E-value=6.8e-10  Score=71.91  Aligned_cols=40  Identities=30%  Similarity=0.487  Sum_probs=26.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++.+ |.|.+|++.|.+...|..|+++|++ +||.|.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445566655 6777777777777777777777776 667764

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.83  E-value=9.9e-10  Score=70.36  Aligned_cols=39  Identities=26%  Similarity=0.416  Sum_probs=24.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||+|
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            345555555 6666666666666666666666666 56666

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=4e-10  Score=71.38  Aligned_cols=39  Identities=31%  Similarity=0.475  Sum_probs=24.6

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++++ |.|.+|++.|...+.|..|+++|+| +||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            455565555 6666666666666666666666666 56665

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.82  E-value=5.8e-10  Score=71.46  Aligned_cols=39  Identities=21%  Similarity=0.342  Sum_probs=22.3

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++.+ |.|.+|++.|.+.+.|..|+++|+| +||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            444555544 5566666666666666666666655 55555

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.81  E-value=1.3e-09  Score=68.94  Aligned_cols=40  Identities=25%  Similarity=0.468  Sum_probs=32.2

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            56677775 7888888888888888888888888776 7774

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=4.8e-10  Score=71.02  Aligned_cols=39  Identities=23%  Similarity=0.348  Sum_probs=22.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            344555554 5666666666666666666666665 55655

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=1.5e-09  Score=70.23  Aligned_cols=41  Identities=29%  Similarity=0.383  Sum_probs=34.0

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            67788775 7889889999988888999988888877 88863

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=1.9e-09  Score=68.20  Aligned_cols=40  Identities=25%  Similarity=0.428  Sum_probs=32.1

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            56677775 7888888888888888888888888776 7774

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.80  E-value=1.6e-09  Score=70.11  Aligned_cols=42  Identities=24%  Similarity=0.438  Sum_probs=34.3

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367788875 7889999999999899999988888776 88863

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.80  E-value=1e-10  Score=81.27  Aligned_cols=52  Identities=15%  Similarity=0.311  Sum_probs=39.8

Q ss_pred             HHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHH
Q psy8466         349 LTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRIL  403 (431)
Q Consensus       349 L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L  403 (431)
                      |..|+++|++. ||.|+.||+.|.....|.   ++|++++ |.|.+||+.|.....+
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            34577788775 788888888888887776   7788776 8888888888765543

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.8e-09  Score=69.87  Aligned_cols=42  Identities=31%  Similarity=0.504  Sum_probs=32.9

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      +|+++|++. ||.|+.|++.|.+...|..|+++|++++ |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            367777765 7888888888888888888888888776 77753

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.9e-09  Score=69.67  Aligned_cols=42  Identities=26%  Similarity=0.394  Sum_probs=34.3

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            367778775 7889999999999999999988888876 88863

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=6e-10  Score=71.40  Aligned_cols=39  Identities=28%  Similarity=0.384  Sum_probs=24.7

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            455565555 6666666666666666666666666 56666

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=3.8e-09  Score=67.93  Aligned_cols=40  Identities=20%  Similarity=0.376  Sum_probs=31.7

Q ss_pred             hhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccccc
Q psy8466         355 LHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCS  394 (431)
Q Consensus       355 ~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~  394 (431)
                      .|+++ ||.|++|++.|.....|..|+++|++++ |.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            45554 7888888888888888888888888776 8888886

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=2e-09  Score=69.62  Aligned_cols=42  Identities=33%  Similarity=0.551  Sum_probs=34.3

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367778775 7889999999999999999988888776 88863

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=6.1e-10  Score=72.11  Aligned_cols=40  Identities=20%  Similarity=0.224  Sum_probs=25.3

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      |+++|++++ |.|.+|++.|.+...|..|+++|+| +||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455565555 6666666666666666666666666 566664

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.9e-09  Score=69.72  Aligned_cols=41  Identities=24%  Similarity=0.395  Sum_probs=32.2

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            66777765 7888888888888888888888888776 77753

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.1e-09  Score=69.54  Aligned_cols=40  Identities=28%  Similarity=0.493  Sum_probs=32.9

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      |+++|++. +|.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            67778775 7888888888888888888888888776 7875

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.3e-09  Score=69.87  Aligned_cols=39  Identities=26%  Similarity=0.370  Sum_probs=23.0

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |+++|++++ |.|.+|++.|.+.+.|..|+++|+| +||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            445555554 5666666666666666666666665 55555

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.7e-09  Score=69.01  Aligned_cols=41  Identities=27%  Similarity=0.449  Sum_probs=33.4

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            67777775 7888888888888888888888888776 88763

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.8e-09  Score=69.78  Aligned_cols=41  Identities=32%  Similarity=0.553  Sum_probs=31.9

Q ss_pred             HhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         353 MNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       353 ~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4556665 7888888888888888888888888776 788776

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2e-09  Score=69.61  Aligned_cols=42  Identities=31%  Similarity=0.509  Sum_probs=32.5

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            366777765 7888888888888888888888888776 77753

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.3e-09  Score=69.27  Aligned_cols=42  Identities=24%  Similarity=0.396  Sum_probs=32.8

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      +|+++|++. ||.|+.|++.|.+...|..|+++|++++ |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367777765 7888888888888888888888888776 77753

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.4e-09  Score=69.22  Aligned_cols=40  Identities=28%  Similarity=0.549  Sum_probs=33.0

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            67778775 7888888888888888888888888776 7875

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=2.1e-09  Score=69.54  Aligned_cols=41  Identities=27%  Similarity=0.478  Sum_probs=31.6

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            366777765 7888888888888888888888887766 7775

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=1.8e-09  Score=69.80  Aligned_cols=42  Identities=26%  Similarity=0.457  Sum_probs=33.2

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 78753

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.77  E-value=3.8e-09  Score=67.18  Aligned_cols=37  Identities=16%  Similarity=0.154  Sum_probs=25.0

Q ss_pred             HhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         382 LHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       382 ~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      +|++.+ |.|..|++.|.....|..|+++|+| +||.|.
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            455555 6777777777777777777777776 667765

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.3e-09  Score=69.32  Aligned_cols=42  Identities=24%  Similarity=0.386  Sum_probs=33.8

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            367778775 7888888888888888888888888776 78763

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2e-09  Score=69.61  Aligned_cols=42  Identities=26%  Similarity=0.483  Sum_probs=33.9

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            367778775 7888888888888888888888888776 88864

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=2.4e-09  Score=69.26  Aligned_cols=41  Identities=24%  Similarity=0.515  Sum_probs=32.0

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      +|+++|++. ||.|+.|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            367777765 7888888888888888888888888766 7775

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.4e-09  Score=69.21  Aligned_cols=41  Identities=24%  Similarity=0.515  Sum_probs=34.1

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            477788775 7899999999999999999988888776 8885

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.5e-09  Score=69.19  Aligned_cols=42  Identities=36%  Similarity=0.578  Sum_probs=32.6

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            366777775 7888888888888888888888888776 77753

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.9e-09  Score=68.04  Aligned_cols=41  Identities=24%  Similarity=0.441  Sum_probs=33.8

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            467788876 7899999999999999999988888776 7774

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.4e-09  Score=69.18  Aligned_cols=41  Identities=29%  Similarity=0.472  Sum_probs=32.0

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            367777765 7888888888888888888888888776 7775

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=3.4e-09  Score=68.51  Aligned_cols=38  Identities=18%  Similarity=0.356  Sum_probs=26.1

Q ss_pred             HHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         381 KLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       381 ~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      ++|++++ |.|.+|++.|.+...|..|+++|++ +||+|.
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4555555 6777777777777777777777776 667775

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.3e-09  Score=70.59  Aligned_cols=39  Identities=31%  Similarity=0.473  Sum_probs=18.5

Q ss_pred             HHHhCCCC-CcccccccccCChHHHHHHHHhcCC--CCCccC
Q psy8466         380 RKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG--ITYKCG  418 (431)
Q Consensus       380 ~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g--~~~~C~  418 (431)
                      +++|++++ |.|.+|++.|.+...|..|+++|++  +||.|.
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            4 GSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             ccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            34444433 4455555555555555555555544  345443

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.6e-09  Score=70.75  Aligned_cols=40  Identities=23%  Similarity=0.231  Sum_probs=25.0

Q ss_pred             HHhCCCC-Cccc--ccccccCChHHHHHHHHhcCC-CCCccCcc
Q psy8466         381 KLHQDIK-NKCD--LCSKEFSSKRILTEHMKLHQG-ITYKCGLC  420 (431)
Q Consensus       381 ~~H~~~~-~~C~--~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C  420 (431)
                      ++|++++ |.|.  .|++.|.....|..|+++|+| +||+|.+|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555554 6665  566666666666666666666 56666655

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.2e-09  Score=69.39  Aligned_cols=42  Identities=31%  Similarity=0.506  Sum_probs=32.5

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            367777765 7888888888888888888888888766 77753

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.3e-09  Score=69.39  Aligned_cols=41  Identities=27%  Similarity=0.515  Sum_probs=31.5

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            56677765 7888888888888888888888887766 77753

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.3e-09  Score=68.56  Aligned_cols=40  Identities=30%  Similarity=0.451  Sum_probs=32.0

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            67777775 7888888888888888888888888776 7774

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.2e-09  Score=69.40  Aligned_cols=41  Identities=29%  Similarity=0.349  Sum_probs=31.0

Q ss_pred             HhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         353 MNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       353 ~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      +++|++. ||.|++|++.|.+...|..|+++|++++ |.|.+|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3456665 6888888888888888888888887666 788776

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3e-09  Score=68.79  Aligned_cols=41  Identities=27%  Similarity=0.417  Sum_probs=34.0

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            477788775 7899999999999999999988888876 8875

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=4.2e-09  Score=68.79  Aligned_cols=36  Identities=28%  Similarity=0.421  Sum_probs=28.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC-Cccccccc
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSK  395 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~  395 (431)
                      +|.|++|++.|.+...|..|+++|++++ |.|.+|++
T Consensus        12 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           12 QVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            6788888888888888888888877766 78888775

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.9e-09  Score=68.04  Aligned_cols=41  Identities=24%  Similarity=0.406  Sum_probs=32.0

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 7774

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.5e-09  Score=69.11  Aligned_cols=41  Identities=29%  Similarity=0.541  Sum_probs=32.8

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 7875

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=3.2e-09  Score=67.90  Aligned_cols=41  Identities=20%  Similarity=0.413  Sum_probs=32.6

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      +|+++|+++ ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            367777775 7888888888888888888888888766 7774

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2e-09  Score=69.22  Aligned_cols=37  Identities=27%  Similarity=0.456  Sum_probs=22.1

Q ss_pred             HhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccC
Q psy8466         382 LHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCG  418 (431)
Q Consensus       382 ~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~  418 (431)
                      +|++++ |.|.+|++.|.+...|..|+++|++ +||.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            455444 5666666666666666666666666 556664

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.70  E-value=4.7e-09  Score=66.27  Aligned_cols=39  Identities=23%  Similarity=0.438  Sum_probs=31.8

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKC  390 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C  390 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56677775 7888888888888888888888888776 776

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=3.9e-09  Score=67.45  Aligned_cols=41  Identities=24%  Similarity=0.477  Sum_probs=32.6

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      .|+++|++. ||.|+.|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            367777775 7888888888888888888888888776 7774

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=3.4e-09  Score=67.00  Aligned_cols=39  Identities=21%  Similarity=0.458  Sum_probs=30.0

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKC  390 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C  390 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56677765 7888888888888888888888887766 666

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=6.1e-10  Score=80.48  Aligned_cols=64  Identities=19%  Similarity=0.234  Sum_probs=52.1

Q ss_pred             hHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCCC
Q psy8466         347 SNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGI  413 (431)
Q Consensus       347 ~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g~  413 (431)
                      ..|..|+++|.+. ||.|..|++.| ....|..|+ .|.+.+ +.|+.|++.|. ...|..|+++|.+.
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~   68 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTB
T ss_pred             hHHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCC
Confidence            4566788777775 78999999999 488899998 787766 88999999887 48899999988873

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=3.1e-09  Score=68.67  Aligned_cols=40  Identities=30%  Similarity=0.522  Sum_probs=30.7

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCC-CC-Cccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQD-IK-NKCD  391 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~-~~-~~C~  391 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++ ++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            66777765 78888888888888888888888877 55 7775

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3.1e-09  Score=68.72  Aligned_cols=41  Identities=29%  Similarity=0.515  Sum_probs=33.1

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      .|+++|.+. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            367778775 7888888888888888888888888766 7875

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=4.2e-09  Score=68.02  Aligned_cols=41  Identities=29%  Similarity=0.515  Sum_probs=32.6

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            367777775 7888888888888888888888888776 7775

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=6.5e-09  Score=66.45  Aligned_cols=40  Identities=23%  Similarity=0.321  Sum_probs=32.0

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            56677765 7888888888888888888888888776 7774

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=2.9e-09  Score=67.30  Aligned_cols=39  Identities=33%  Similarity=0.570  Sum_probs=30.0

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKC  390 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C  390 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66777765 7888888888888888888888887766 665

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=3.2e-09  Score=67.12  Aligned_cols=39  Identities=26%  Similarity=0.455  Sum_probs=31.5

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKC  390 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C  390 (431)
                      |+++|++. ||.|+.|++.|.+...|..|+++|++++ |.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56777775 7888888888888888888888888766 766

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.68  E-value=4.5e-09  Score=67.93  Aligned_cols=40  Identities=33%  Similarity=0.598  Sum_probs=28.9

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      |+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            45666665 6777777777777777777777777766 7764

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=6.2e-09  Score=65.38  Aligned_cols=36  Identities=28%  Similarity=0.429  Sum_probs=22.1

Q ss_pred             HhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         382 LHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       382 ~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      +|++++ |.|.+|++.|.....|..|+++|+| +||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            455544 6666666666666666666666666 56655

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=8.5e-09  Score=65.89  Aligned_cols=40  Identities=28%  Similarity=0.591  Sum_probs=32.7

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKC  390 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C  390 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            367788876 7889899999988888999988888776 665

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=3.9e-09  Score=68.21  Aligned_cols=41  Identities=22%  Similarity=0.466  Sum_probs=32.2

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      +|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            367777775 7888888888888888888888887766 7774

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=4.4e-09  Score=67.20  Aligned_cols=40  Identities=28%  Similarity=0.463  Sum_probs=31.8

Q ss_pred             HHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccc
Q psy8466         351 KHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKC  390 (431)
Q Consensus       351 ~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C  390 (431)
                      .|+++|++. ||.|++|++.|.+...|..|+++|++++ |.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            367777775 7888888888888888888888888766 776

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=1.1e-08  Score=66.69  Aligned_cols=42  Identities=24%  Similarity=0.385  Sum_probs=32.3

Q ss_pred             HHhhhCCC-ccccc--ccccccCCHHHHHHHHHHhCCCC-Cccccc
Q psy8466         352 HMNLHQGI-RYKCD--LCSKEFSWKGHLTEHRKLHQDIK-NKCDLC  393 (431)
Q Consensus       352 H~~~h~~~-~~~C~--~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C  393 (431)
                      |.++|++. ||.|.  .|++.|.....|..|+++|++++ |.|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34566665 78887  78888888888888888888776 888776

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.60  E-value=2.9e-08  Score=62.96  Aligned_cols=38  Identities=21%  Similarity=0.273  Sum_probs=29.1

Q ss_pred             hhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         355 LHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       355 ~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      +|++. ||.|+.|++.|.+...|..|+++|++++ |.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            45654 7888888888888888888888888776 77753

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.2e-08  Score=64.58  Aligned_cols=39  Identities=23%  Similarity=0.379  Sum_probs=30.5

Q ss_pred             HhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         353 MNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       353 ~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      +++|++. ||.|++|++.|.+...|..|+++|++++ |.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            4566665 7888888888888888888888888776 7775

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=1.1e-08  Score=65.69  Aligned_cols=40  Identities=28%  Similarity=0.522  Sum_probs=30.6

Q ss_pred             HhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccccc
Q psy8466         353 MNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDL  392 (431)
Q Consensus       353 ~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~  392 (431)
                      .++|++. ||.|++|++.|.+...|..|+++|++++ |.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            3456665 7888888888888888888888888776 77753

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=4.6e-08  Score=61.27  Aligned_cols=36  Identities=33%  Similarity=0.590  Sum_probs=27.1

Q ss_pred             hhCCC-cccccccccccCCHHHHHHHHHHhCCCC-Ccc
Q psy8466         355 LHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKC  390 (431)
Q Consensus       355 ~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C  390 (431)
                      +|++. ||.|++|++.|.+...|..|+++|++++ |.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            45554 7888888888888888888888887766 665

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=3.4e-09  Score=76.54  Aligned_cols=64  Identities=19%  Similarity=0.263  Sum_probs=48.3

Q ss_pred             HHHHHHHHhcCCC-CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         321 YLTEHMKLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       321 ~l~~H~~~h~~~~-~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      .|..|+++|.+.+ +.|+.|++.|. ...|..|+ .|.+. ||.|+.|++.|. ...|..|+++|.+.+
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            4556766677766 58888888884 78888888 66654 788888888877 488888888887654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.47  E-value=5.3e-08  Score=59.36  Aligned_cols=34  Identities=35%  Similarity=0.601  Sum_probs=17.3

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCC
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      |+++|++. ||.|+.|++.|.+...|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            34444443 45555555555555555555555543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.47  E-value=1.1e-09  Score=81.63  Aligned_cols=56  Identities=18%  Similarity=0.339  Sum_probs=45.0

Q ss_pred             HhhhCCC-cccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         353 MNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       353 ~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      .++|++. ||.|+.|++.|.+...|..|+++|++++ |.|..|.    ....|..|+++|.|
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            3457765 7999999999999999999999998877 8886654    45667778888887

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.46  E-value=4.2e-08  Score=59.84  Aligned_cols=34  Identities=29%  Similarity=0.387  Sum_probs=31.7

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |+++|++++ |.|+.|++.|.+...|..|+++|+|
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            678899887 9999999999999999999999987

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.44  E-value=1e-07  Score=58.87  Aligned_cols=30  Identities=30%  Similarity=0.595  Sum_probs=19.3

Q ss_pred             CcccccccccCChHHHHHHHHhcCC-CCCcc
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQG-ITYKC  417 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C  417 (431)
                      |.|.+|++.|...+.|..|+++|+| +||.+
T Consensus         7 ~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            7 YTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             EECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             eECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            6666666666666666666666666 55554

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=1e-07  Score=58.06  Aligned_cols=27  Identities=30%  Similarity=0.562  Sum_probs=13.8

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|+.|++.|.+...|..|+++|+++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            9 SYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            455555555555555555555555443

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1.8e-07  Score=56.95  Aligned_cols=32  Identities=25%  Similarity=0.559  Sum_probs=26.6

Q ss_pred             HHhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         381 KLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       381 ~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ++|++++ |.|.+|++.|.....|..|+++|+|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            4577766 8888888888888888888888887

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.33  E-value=3.6e-07  Score=54.09  Aligned_cols=28  Identities=29%  Similarity=0.457  Sum_probs=16.6

Q ss_pred             CcccccccccCChHHHHHHHHhcCC-CCC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQG-ITY  415 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g-~~~  415 (431)
                      |.|.+|++.|...+.|..|+++|+| +||
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~~H~~~~~~   31 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHITLHELLGEE   31 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTTTCCC
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhCCCCCC
Confidence            5566666666666666666666655 444

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.30  E-value=2.2e-08  Score=74.56  Aligned_cols=45  Identities=16%  Similarity=0.299  Sum_probs=39.5

Q ss_pred             HHHhCCCC-CcccccccccCChHHHHHHHHhcCC-CCCccCcccccc
Q psy8466         380 RKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG-ITYKCGLCSKEF  424 (431)
Q Consensus       380 ~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g-~~~~C~~C~~~f  424 (431)
                      .++|++.+ |.|.+|++.|.+...|..|+++|+| +||+|..|.+..
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~~~   63 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQERRK   63 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhhHH
Confidence            45688777 9999999999999999999999999 899998876543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.29  E-value=3.1e-07  Score=54.94  Aligned_cols=26  Identities=31%  Similarity=0.511  Sum_probs=13.1

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      ||.|+.|++.|.+...|..|+++|++
T Consensus         7 ~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            7 GYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CeECCCCcchhCCHHHHHHHHHHHcC
Confidence            45555555555555555555555444

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.27  E-value=6.1e-07  Score=61.87  Aligned_cols=31  Identities=19%  Similarity=0.398  Sum_probs=17.7

Q ss_pred             Ccccc--cccccCChHHHHHHH-HhcCC-CCCccC
Q psy8466         388 NKCDL--CSKEFSSKRILTEHM-KLHQG-ITYKCG  418 (431)
Q Consensus       388 ~~C~~--C~~~F~~~~~L~~H~-~~H~g-~~~~C~  418 (431)
                      |+|.+  |+++|.+.+.|..|+ ++|+| +||-|.
T Consensus        28 YkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           28 YRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             eECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            55643  666666666666665 45665 555554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.27  E-value=6.2e-07  Score=53.01  Aligned_cols=28  Identities=32%  Similarity=0.725  Sum_probs=23.2

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      ||.|+.||+.|.....|..|+++|++++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~   29 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLG   29 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            6888888888888888888888888766

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.26  E-value=5.8e-07  Score=55.39  Aligned_cols=31  Identities=26%  Similarity=0.560  Sum_probs=24.3

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC-Ccc
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKC  390 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C  390 (431)
                      ||.|++||+.|.+.+.|..|+++|++++ |.+
T Consensus         6 ~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            6 SYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             ceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            7888888888888888888888888766 543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.24  E-value=6.6e-07  Score=54.75  Aligned_cols=27  Identities=30%  Similarity=0.429  Sum_probs=15.7

Q ss_pred             cccccc--cccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||+|+.  |+++|.+++.|..|+++|+++
T Consensus         9 p~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            9 LLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            566654  666666666666666665543

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.24  E-value=4e-07  Score=54.53  Aligned_cols=27  Identities=30%  Similarity=0.671  Sum_probs=15.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|.+|++.|.+...|..|+++|+++
T Consensus         7 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            7 PFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            455555555555555555555555543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.23  E-value=6.5e-07  Score=53.50  Aligned_cols=30  Identities=30%  Similarity=0.512  Sum_probs=24.7

Q ss_pred             hCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         383 HQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       383 H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |++.+ |.|.+|++.|.+.+.|..|+++|+|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            55655 8888888888888888888888887

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.22  E-value=6.9e-07  Score=53.46  Aligned_cols=30  Identities=23%  Similarity=0.541  Sum_probs=23.5

Q ss_pred             hCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         383 HQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       383 H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |++++ |.|.+|++.|...+.|..|+++|+|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            55555 7888888888888888888888877

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.20  E-value=4.4e-07  Score=55.24  Aligned_cols=31  Identities=23%  Similarity=0.281  Sum_probs=16.7

Q ss_pred             hhCCC-cccccccccccCCHHHHHHH-HHHhCC
Q psy8466         355 LHQGI-RYKCDLCSKEFSWKGHLTEH-RKLHQD  385 (431)
Q Consensus       355 ~h~~~-~~~C~~C~~~f~~~~~L~~H-~~~H~~  385 (431)
                      +|++. ||+|+.|++.|.+...|..| +++|++
T Consensus         3 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            3 SGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             ccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            34443 45555555555555555555 555544

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.19  E-value=6.7e-07  Score=54.73  Aligned_cols=31  Identities=26%  Similarity=0.405  Sum_probs=27.3

Q ss_pred             hCCCC-Ccccc--cccccCChHHHHHHHHhcCCC
Q psy8466         383 HQDIK-NKCDL--CSKEFSSKRILTEHMKLHQGI  413 (431)
Q Consensus       383 H~~~~-~~C~~--C~~~F~~~~~L~~H~~~H~g~  413 (431)
                      +++++ |+|++  |+++|.+++.|..|+++|+|.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45665 99986  999999999999999999983

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=8.7e-07  Score=53.41  Aligned_cols=27  Identities=30%  Similarity=0.527  Sum_probs=15.1

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|++|++.|.+...|..|+++|+++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            9 PFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhccC
Confidence            455555555555555555555555543

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=1e-06  Score=53.03  Aligned_cols=27  Identities=33%  Similarity=0.528  Sum_probs=16.1

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|++|++.|.....|..|+++|+++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            9 PYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            566666666666666666666665543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.17  E-value=6.9e-07  Score=53.86  Aligned_cols=27  Identities=26%  Similarity=0.580  Sum_probs=15.8

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|.+|++.|.....|..|+++|+++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            9 LYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            556666666666666666665555543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.17  E-value=1.9e-06  Score=59.88  Aligned_cols=36  Identities=22%  Similarity=0.331  Sum_probs=22.4

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCCCccccccc
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIKNKCDLCSK  395 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~C~~C~~  395 (431)
                      ||.|..|++.|.+...|..|+++|++....+.+++.
T Consensus        13 py~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~~   48 (66)
T 2epp_A           13 ILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDL   48 (66)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCCC
T ss_pred             CcCCCCCCCccCCHHHHHhhhhhhCCCccccccccC
Confidence            566666666666666666666666665555555543

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.16  E-value=5.8e-07  Score=54.58  Aligned_cols=26  Identities=27%  Similarity=0.437  Sum_probs=13.9

Q ss_pred             cccccccccccCCH-HHHHHHHHHhCC
Q psy8466         360 RYKCDLCSKEFSWK-GHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~~C~~~f~~~-~~L~~H~~~H~~  385 (431)
                      ||.|+.|++.|.+. ..|..|+++|++
T Consensus         9 ~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            9 AMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CeECCCCChhhccCHHHHHHHHHhcCC
Confidence            45555555555555 555555555544

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=4.2e-07  Score=55.33  Aligned_cols=32  Identities=19%  Similarity=0.293  Sum_probs=29.4

Q ss_pred             HHhCCCC-CcccccccccCChHHHHHH-HHhcCC
Q psy8466         381 KLHQDIK-NKCDLCSKEFSSKRILTEH-MKLHQG  412 (431)
Q Consensus       381 ~~H~~~~-~~C~~C~~~F~~~~~L~~H-~~~H~g  412 (431)
                      ++|++++ |.|..|++.|...+.|..| +++|+|
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            5688877 9999999999999999999 999987

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.13  E-value=1.7e-06  Score=52.06  Aligned_cols=27  Identities=41%  Similarity=0.752  Sum_probs=14.3

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      +|.|++|++.|.+...|..|+++|+++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            9 THLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            455555555555555555555555443

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.10  E-value=2.1e-06  Score=51.68  Aligned_cols=27  Identities=30%  Similarity=0.763  Sum_probs=16.6

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         9 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            9 IFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            566666666666666666666666554

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.10  E-value=2.2e-06  Score=48.54  Aligned_cols=27  Identities=26%  Similarity=0.776  Sum_probs=14.6

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555443

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.10  E-value=3e-06  Score=58.82  Aligned_cols=41  Identities=22%  Similarity=0.372  Sum_probs=30.8

Q ss_pred             hCCCC-CcccccccccCChHHHHHHHHhcCCCCCccCccccc
Q psy8466         383 HQDIK-NKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKE  423 (431)
Q Consensus       383 H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g~~~~C~~C~~~  423 (431)
                      |.+++ |.|..|++.|.+...|..|+++|++....+.+++..
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~~~   49 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDLP   49 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCCCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCccccccccCC
Confidence            44444 888889998888888888988888865556665543

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.07  E-value=1.4e-06  Score=53.19  Aligned_cols=25  Identities=24%  Similarity=0.452  Sum_probs=14.2

Q ss_pred             Cccc--ccccccCChHHHHHHHHhcCC
Q psy8466         388 NKCD--LCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       388 ~~C~--~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.|.  .|++.|...+.|..|+++|+|
T Consensus         7 ~~C~~~~C~k~f~~~~~L~~H~~~H~~   33 (38)
T 1bhi_A            7 FLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             EECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             eECCCCCCCcccCCHHHHHHHHHHhCC
Confidence            5555  355555555555555555555

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.06  E-value=2.8e-06  Score=58.59  Aligned_cols=33  Identities=21%  Similarity=0.356  Sum_probs=25.8

Q ss_pred             Ccccccc--cccccCCHHHHHHHH-HHhCCCC-Cccc
Q psy8466         359 IRYKCDL--CSKEFSWKGHLTEHR-KLHQDIK-NKCD  391 (431)
Q Consensus       359 ~~~~C~~--C~~~f~~~~~L~~H~-~~H~~~~-~~C~  391 (431)
                      +||+|..  |+++|.+.+.|..|+ ++|++++ |.|.
T Consensus        26 KPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~   62 (73)
T 1x3c_A           26 RPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSA   62 (73)
T ss_dssp             CSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCC
T ss_pred             CCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCcccc
Confidence            3788865  888888888888887 5788776 6664

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=1.6e-06  Score=52.17  Aligned_cols=31  Identities=32%  Similarity=0.425  Sum_probs=28.2

Q ss_pred             HhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         382 LHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       382 ~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.+.+ |.|.+|++.|.....|..|+++|+|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            466666 9999999999999999999999987

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=1.5e-06  Score=52.37  Aligned_cols=31  Identities=35%  Similarity=0.428  Sum_probs=28.3

Q ss_pred             HhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         382 LHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       382 ~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      .|.+++ |.|.+|++.|.+...|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            467766 9999999999999999999999987

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=9e-07  Score=53.71  Aligned_cols=32  Identities=25%  Similarity=0.400  Sum_probs=28.9

Q ss_pred             HHhCCCC-CcccccccccCCh-HHHHHHHHhcCC
Q psy8466         381 KLHQDIK-NKCDLCSKEFSSK-RILTEHMKLHQG  412 (431)
Q Consensus       381 ~~H~~~~-~~C~~C~~~F~~~-~~L~~H~~~H~g  412 (431)
                      ++|++++ |.|.+|++.|.+. +.|..|+++|+|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            3677776 9999999999999 999999999987

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.06  E-value=2.4e-06  Score=51.35  Aligned_cols=31  Identities=39%  Similarity=0.629  Sum_probs=27.9

Q ss_pred             HhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         382 LHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       382 ~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.+.+ |.|.+|++.|.+...|..|+++|+|
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            356666 9999999999999999999999987

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.04  E-value=1.2e-06  Score=52.83  Aligned_cols=31  Identities=19%  Similarity=0.394  Sum_probs=28.1

Q ss_pred             HhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         382 LHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       382 ~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      .|++.+ |.|.+|++.|...+.|..|+++|+|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            466666 9999999999999999999999987

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.04  E-value=1.8e-06  Score=56.00  Aligned_cols=30  Identities=27%  Similarity=0.529  Sum_probs=15.5

Q ss_pred             hCCCC-CcccccccccCChHHHHHHHH-hcCC
Q psy8466         383 HQDIK-NKCDLCSKEFSSKRILTEHMK-LHQG  412 (431)
Q Consensus       383 H~~~~-~~C~~C~~~F~~~~~L~~H~~-~H~g  412 (431)
                      |++++ |.|.+|++.|.+...|..|++ +|+|
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            44443 555555555555555555555 5554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.03  E-value=2.1e-06  Score=47.76  Aligned_cols=24  Identities=42%  Similarity=0.987  Sum_probs=11.7

Q ss_pred             ccccccccccCCHHHHHHHHHHhC
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      |.|..|++.|.+...|..|+++|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            444445555554444544444444

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.02  E-value=1.8e-06  Score=48.97  Aligned_cols=26  Identities=38%  Similarity=0.772  Sum_probs=13.7

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      ||.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            45555555555555555555555544

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.01  E-value=3.3e-06  Score=48.11  Aligned_cols=27  Identities=30%  Similarity=0.569  Sum_probs=15.3

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|..|++.|.....|..|+++|+++
T Consensus         3 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            3 PYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CccCCCCCcccCCHHHHHHHHHHhccC
Confidence            455555555555555555555555543

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.00  E-value=2e-06  Score=51.79  Aligned_cols=20  Identities=35%  Similarity=0.491  Sum_probs=10.7

Q ss_pred             CcccccccccCChHHHHHHH
Q psy8466         388 NKCDLCSKEFSSKRILTEHM  407 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~  407 (431)
                      |.|..|+++|.+++.|..|+
T Consensus         9 ~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CEETTTTEECSCHHHHHHHH
T ss_pred             eECCCCCCccCCHhHccCcC
Confidence            55555555555555555554

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=2.7e-06  Score=48.12  Aligned_cols=27  Identities=33%  Similarity=0.714  Sum_probs=16.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            455666666666666666666665543

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.98  E-value=3.8e-06  Score=48.50  Aligned_cols=27  Identities=26%  Similarity=0.682  Sum_probs=14.5

Q ss_pred             ccccc--ccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCD--LCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~--~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|+  .||+.|.+...|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            45554  5555555555555555555543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.96  E-value=3.2e-06  Score=54.76  Aligned_cols=33  Identities=24%  Similarity=0.420  Sum_probs=24.3

Q ss_pred             hhCCC-cccccccccccCCHHHHHHHHH-HhCCCC
Q psy8466         355 LHQGI-RYKCDLCSKEFSWKGHLTEHRK-LHQDIK  387 (431)
Q Consensus       355 ~h~~~-~~~C~~C~~~f~~~~~L~~H~~-~H~~~~  387 (431)
                      +|++. ||.|.+|++.|.....|..|++ +|+++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            35554 7888888888888888888888 887664

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.96  E-value=3.4e-06  Score=50.66  Aligned_cols=30  Identities=30%  Similarity=0.599  Sum_probs=27.1

Q ss_pred             hCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         383 HQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       383 H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.+.+ |.|.+|++.|.....|..|+++|+|
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            55555 9999999999999999999999987

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.96  E-value=4.3e-06  Score=46.52  Aligned_cols=24  Identities=25%  Similarity=0.555  Sum_probs=12.3

Q ss_pred             cccccccccccCCHHHHHHHHHHh
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H  383 (431)
                      ||.|+.||+.|.+...|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            3 PFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHHC
T ss_pred             CccCCCcChhhCCHHHHHHHHHHc
Confidence            455555555555555555555544

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.95  E-value=6.8e-07  Score=57.72  Aligned_cols=35  Identities=17%  Similarity=0.294  Sum_probs=19.9

Q ss_pred             HHhhhCCC-ccccc--ccccccCCHHHHHHHHHHhCCC
Q psy8466         352 HMNLHQGI-RYKCD--LCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       352 H~~~h~~~-~~~C~--~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      |+..|++. ||.|+  .|++.|.+.+.|..|+++|+++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            33445544 56663  4666666666666666666554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.94  E-value=3.4e-06  Score=47.05  Aligned_cols=24  Identities=25%  Similarity=0.562  Sum_probs=12.7

Q ss_pred             cccccccccccCCHHHHHHHHHHh
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H  383 (431)
                      ||.|+.||+.|...+.|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhc
Confidence            455555555555555555555544

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.94  E-value=3.8e-06  Score=47.15  Aligned_cols=25  Identities=36%  Similarity=0.868  Sum_probs=12.7

Q ss_pred             cccccccccccCCHHHHHHHHHHhC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      ||.|+.|++.|.+...|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcC
Confidence            4455555555555555555555443

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.93  E-value=3.3e-06  Score=47.68  Aligned_cols=26  Identities=38%  Similarity=0.714  Sum_probs=12.4

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      ||.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            34444444444444444444444443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.16  E-value=1.3e-06  Score=49.62  Aligned_cols=26  Identities=27%  Similarity=0.600  Sum_probs=13.7

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      ||.|+.|++.|.....|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            35555555555555555555555544

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.92  E-value=4e-06  Score=46.53  Aligned_cols=26  Identities=35%  Similarity=0.807  Sum_probs=23.9

Q ss_pred             CCcccccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|..|++.|.+.+.|..|+++|+|
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            37899999999999999999999986

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.92  E-value=4.6e-06  Score=50.53  Aligned_cols=27  Identities=26%  Similarity=0.576  Sum_probs=15.5

Q ss_pred             cccccc--cccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|.+  |++.|.+.+.|..|+++|+++
T Consensus         8 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            8 QHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            556653  666666666666665555543

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.91  E-value=4e-07  Score=53.44  Aligned_cols=28  Identities=25%  Similarity=0.464  Sum_probs=16.4

Q ss_pred             CcccccccccCChHHHHHHHHhcCC-CCC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQG-ITY  415 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g-~~~  415 (431)
                      |.|..|++.|...+.|..|+++|+| +||
T Consensus         3 ~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            3 FACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             SSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            5566666666666666666666655 443

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.91  E-value=3.9e-06  Score=47.10  Aligned_cols=27  Identities=33%  Similarity=0.735  Sum_probs=24.9

Q ss_pred             CCCcccccccccCChHHHHHHHHhcCC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      .+|.|..|++.|...+.|..|+++|+|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            358999999999999999999999986

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.89  E-value=6.7e-06  Score=46.76  Aligned_cols=25  Identities=20%  Similarity=0.452  Sum_probs=11.5

Q ss_pred             CcccccccccCChHHHHHHHHhcCC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.|..|++.|...+.|..|+++|+|
T Consensus         3 ~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            3 YQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             ccCCCCCCccCCHHHHHHHHHHHcc
Confidence            4444444444444444444444443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.89  E-value=5.9e-06  Score=45.93  Aligned_cols=26  Identities=23%  Similarity=0.501  Sum_probs=24.0

Q ss_pred             CCCcccccccccCChHHHHHHHHhcC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      .+|.|..||+.|.+.+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            35899999999999999999999985

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.88  E-value=8.3e-06  Score=46.00  Aligned_cols=26  Identities=23%  Similarity=0.666  Sum_probs=24.8

Q ss_pred             CCcccccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|..|++.|.....|..|+++|+|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcC
Confidence            58999999999999999999999987

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.88  E-value=7.4e-06  Score=47.60  Aligned_cols=26  Identities=42%  Similarity=0.810  Sum_probs=13.2

Q ss_pred             ccccc--ccccccCCHHHHHHHHHHhCC
Q psy8466         360 RYKCD--LCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~--~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      ||.|+  .|++.|.+...|..|+++|++
T Consensus         3 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            3 PYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            44554  455555555555555555544

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.88  E-value=6.2e-06  Score=50.18  Aligned_cols=28  Identities=25%  Similarity=0.561  Sum_probs=23.0

Q ss_pred             ccccc--ccccccCCHHHHHHHHHHhCCCC
Q psy8466         360 RYKCD--LCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       360 ~~~C~--~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      ||.|.  .|++.|.+...|..|+++|++++
T Consensus         6 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            6 PFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             CEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             ceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            78888  48888888888888888887765

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.86  E-value=5.1e-06  Score=49.95  Aligned_cols=21  Identities=33%  Similarity=0.638  Sum_probs=16.5

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHR  380 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~  380 (431)
                      ||.|+.||++|.+.+.|..|+
T Consensus         8 p~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCEETTTTEECSCHHHHHHHH
T ss_pred             CeECCCCCCccCCHhHccCcC
Confidence            777777777777777777777

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.85  E-value=4.8e-06  Score=46.40  Aligned_cols=26  Identities=27%  Similarity=0.510  Sum_probs=23.8

Q ss_pred             CCCcccccccccCChHHHHHHHHhcC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      .+|.|..||+.|...+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            35899999999999999999999885

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.83  E-value=1.1e-05  Score=45.83  Aligned_cols=28  Identities=21%  Similarity=0.430  Sum_probs=26.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      ||.|+.|++.|.....|..|+++|++.+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            7999999999999999999999998753

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.04  E-value=2.4e-06  Score=47.08  Aligned_cols=24  Identities=33%  Similarity=0.744  Sum_probs=11.1

Q ss_pred             cccccccccccCCHHHHHHHHHHh
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H  383 (431)
                      ||.|+.||+.|.+...|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            344444444444444444444443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.82  E-value=6.7e-07  Score=52.41  Aligned_cols=28  Identities=25%  Similarity=0.465  Sum_probs=20.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      ||.|+.||+.|.+.+.|..|+++|++++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~k   29 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVV   29 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCC
Confidence            5677777777777777777777776654

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.02  E-value=2.6e-06  Score=48.64  Aligned_cols=26  Identities=31%  Similarity=0.708  Sum_probs=13.3

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      ||.|+.|++.|.+...|..|+++|++
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            44555555555555555555555443

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.80  E-value=6.9e-06  Score=49.71  Aligned_cols=30  Identities=27%  Similarity=0.634  Sum_probs=26.9

Q ss_pred             hCCCC-Ccccc--cccccCChHHHHHHHHhcCC
Q psy8466         383 HQDIK-NKCDL--CSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       383 H~~~~-~~C~~--C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |++++ |.|.+  |++.|...+.|..|+++|+|
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            56666 99995  99999999999999999987

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.79  E-value=1e-05  Score=45.97  Aligned_cols=27  Identities=26%  Similarity=0.589  Sum_probs=25.2

Q ss_pred             CCCcccccccccCChHHHHHHHHhcCC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      .+|.|..|++.|.....|..|+++|+|
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            358999999999999999999999987

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.79  E-value=7.5e-06  Score=46.67  Aligned_cols=26  Identities=35%  Similarity=0.883  Sum_probs=12.6

Q ss_pred             cccccccccccCCHHHHHHH-HHHhCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEH-RKLHQD  385 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H-~~~H~~  385 (431)
                      ||.|+.|++.|.+...|..| +++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            34455555555555555555 344443

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.78  E-value=6.9e-06  Score=46.39  Aligned_cols=26  Identities=38%  Similarity=0.621  Sum_probs=24.7

Q ss_pred             CCcccccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|..|++.|...+.|..|+++|+|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcC
Confidence            48999999999999999999999987

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.75  E-value=1.6e-06  Score=55.89  Aligned_cols=36  Identities=19%  Similarity=0.303  Sum_probs=31.2

Q ss_pred             HHHHHHhCCCC-Cccc--ccccccCChHHHHHHHHhcCC
Q psy8466         377 TEHRKLHQDIK-NKCD--LCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       377 ~~H~~~H~~~~-~~C~--~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ..|..+|++++ |.|.  .|++.|...+.|..|+++|+|
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            34556688887 9996  699999999999999999997

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.73  E-value=1.2e-05  Score=45.25  Aligned_cols=26  Identities=35%  Similarity=0.731  Sum_probs=24.6

Q ss_pred             CCcccccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|..|++.|.....|..|+++|+|
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            58999999999999999999999987

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.92  E-value=4.3e-06  Score=46.05  Aligned_cols=25  Identities=28%  Similarity=0.663  Sum_probs=23.2

Q ss_pred             CCcccccccccCChHHHHHHHHhcC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      +|.|..||+.|.+.+.|..|+++|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            4899999999999999999999884

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.72  E-value=1.6e-05  Score=45.70  Aligned_cols=26  Identities=31%  Similarity=0.645  Sum_probs=24.5

Q ss_pred             CCccc--ccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCD--LCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~--~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|+  .||+.|...+.|..|+++|+|
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            58998  999999999999999999997

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.90  E-value=4.7e-06  Score=47.19  Aligned_cols=26  Identities=31%  Similarity=0.726  Sum_probs=24.6

Q ss_pred             CCcccccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|..|++.|...+.|..|+++|+|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            48999999999999999999999987

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.69  E-value=1.2e-05  Score=45.20  Aligned_cols=26  Identities=35%  Similarity=0.804  Sum_probs=24.6

Q ss_pred             CCcccccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|..|++.|.....|..|+++|+|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            48999999999999999999999987

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.66  E-value=2.3e-05  Score=44.11  Aligned_cols=25  Identities=32%  Similarity=0.779  Sum_probs=12.5

Q ss_pred             ccccc--ccccccCCHHHHHHHHHHhC
Q psy8466         360 RYKCD--LCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       360 ~~~C~--~C~~~f~~~~~L~~H~~~H~  384 (431)
                      ||.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            34455  55555555555555555443

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.66  E-value=2.4e-05  Score=45.28  Aligned_cols=28  Identities=36%  Similarity=0.494  Sum_probs=25.4

Q ss_pred             CCCccc--ccccccCChHHHHHHHHhcCCC
Q psy8466         386 IKNKCD--LCSKEFSSKRILTEHMKLHQGI  413 (431)
Q Consensus       386 ~~~~C~--~C~~~F~~~~~L~~H~~~H~g~  413 (431)
                      .+|.|.  .|++.|...+.|..|+++|+|.
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            358999  8999999999999999999973

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.78  E-value=8e-06  Score=46.50  Aligned_cols=26  Identities=27%  Similarity=0.699  Sum_probs=24.6

Q ss_pred             CCcccccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|..|++.|...+.|..|+++|+|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            3 PYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            48999999999999999999999987

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.57  E-value=2.6e-05  Score=43.84  Aligned_cols=26  Identities=35%  Similarity=0.778  Sum_probs=24.2

Q ss_pred             CCccc--ccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCD--LCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~--~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|.  .|++.|...+.|..|+++|+|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            47899  999999999999999999986

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.52  E-value=3.2e-05  Score=43.88  Aligned_cols=26  Identities=35%  Similarity=0.892  Sum_probs=24.1

Q ss_pred             CCcccccccccCChHHHHHH-HHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEH-MKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H-~~~H~g  412 (431)
                      +|.|..|++.|.+.+.|..| +++|+|
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            58999999999999999999 688987

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.11  E-value=0.00059  Score=46.82  Aligned_cols=45  Identities=20%  Similarity=0.236  Sum_probs=26.5

Q ss_pred             cccccCCHHHHHHHH-HHhCCC-------CCccc--ccccccCChHHHHHHHHhc
Q psy8466         366 CSKEFSWKGHLTEHR-KLHQDI-------KNKCD--LCSKEFSSKRILTEHMKLH  410 (431)
Q Consensus       366 C~~~f~~~~~L~~H~-~~H~~~-------~~~C~--~C~~~F~~~~~L~~H~~~H  410 (431)
                      |++.|.+...|..|+ +.|.+.       .|.|.  .|++.+.....|..|++..
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            566666666666665 345322       25564  5666666666666666654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.77  E-value=0.0015  Score=44.70  Aligned_cols=45  Identities=18%  Similarity=0.259  Sum_probs=30.8

Q ss_pred             chhccCCchHHHHHHh-hhCCC-------ccccc--ccccccCCHHHHHHHHHHh
Q psy8466         339 CSKEFSHKSNLTKHMN-LHQGI-------RYKCD--LCSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       339 C~k~f~~~~~L~~H~~-~h~~~-------~~~C~--~C~~~f~~~~~L~~H~~~H  383 (431)
                      |++.|.+...|..|+. .|.+.       +|.|.  .|++.+.....|..|+++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            6666666666766763 45432       57786  6888888788888887754

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.46  E-value=0.0045  Score=51.76  Aligned_cols=135  Identities=16%  Similarity=0.321  Sum_probs=89.4

Q ss_pred             CCCCcCCcccCChhHHHHHHhHhcCCCCCCCCCCcccCCHHHHHHHHHHhCCCCCCCCchhhccCChh-----HHHHHHH
Q psy8466         253 NKCDLCSKEFSTKSYLTEHMKLHQGIKNKCDLCSKEFSTKSYLTEHMKLHQGLKNKCDLCSKEFSRKS-----YLTEHMK  327 (431)
Q Consensus       253 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~-----~l~~H~~  327 (431)
                      +.|++|...|...              ..+ .||..|= ..-+...+...   ...|+.|...+....     .+.+-+ 
T Consensus        19 ~~C~IC~~~~~~p--------------v~~-~CgH~fC-~~Ci~~~~~~~---~~~CP~Cr~~~~~~~~~~~~~~~~~i-   78 (170)
T 3hcs_A           19 YECPICLMALREA--------------VQT-PCGHRFC-KACIIKSIRDA---GHKCPVDNEILLENQLFPDNFAKREI-   78 (170)
T ss_dssp             GBCTTTCSBCSSE--------------EEC-TTSCEEE-HHHHHHHHHHH---CSBCTTTCCBCCGGGCEECHHHHHHH-
T ss_pred             CCCCCCChhhcCc--------------EEC-CCCCHHH-HHHHHHHHHhC---CCCCCCCccCcchhhhhhhHHHHHHH-
Confidence            3788888777643              122 3666664 33344443322   137888887776532     122211 


Q ss_pred             HhcCCCCcc--ccchhccCCchHHHHHHhhhCCCcccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHH
Q psy8466         328 LHQGIKNKC--DLCSKEFSHKSNLTKHMNLHQGIRYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILT  404 (431)
Q Consensus       328 ~h~~~~~~C--~~C~k~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~  404 (431)
                        ......|  ..|+..+. ...|..|.....-.+..|+.|+..+ .+..|..|....-..+ -.|+.|+..|.. ..|.
T Consensus        79 --~~l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~  153 (170)
T 3hcs_A           79 --LSLMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKE  153 (170)
T ss_dssp             --HTSEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHH
T ss_pred             --hhcccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHH
Confidence              1233467  46877664 5678899876655678999999888 7778999997666555 689999998854 6789


Q ss_pred             HHHHhcCC
Q psy8466         405 EHMKLHQG  412 (431)
Q Consensus       405 ~H~~~H~g  412 (431)
                      .|..++.|
T Consensus       154 ~H~~~~~~  161 (170)
T 3hcs_A          154 IHDQNCPL  161 (170)
T ss_dssp             HHHTTCCC
T ss_pred             hHHHhCcC
Confidence            99999988

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.65  E-value=0.012  Score=46.38  Aligned_cols=71  Identities=23%  Similarity=0.365  Sum_probs=45.7

Q ss_pred             CccccchhccCCchHHHHHH--hhhCCC--ccccccc------ccccCCHHHHHHHHHHhCCCC-CcccccccccCChHH
Q psy8466         334 NKCDLCSKEFSHKSNLTKHM--NLHQGI--RYKCDLC------SKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRI  402 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~--~~h~~~--~~~C~~C------~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~  402 (431)
                      +.|.+|+..|.+.+.+..|.  +.|...  +|.+..+      ++.+....    +...+.+.+ |.|.+|++.|.+...
T Consensus        33 ~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~~~  108 (127)
T 1zu1_A           33 TQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSPVV  108 (127)
T ss_dssp             SEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSHHH
T ss_pred             CcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCHHH
Confidence            57999999999999999998  456543  3443211      12222111    111233333 789999999999999


Q ss_pred             HHHHHH
Q psy8466         403 LTEHMK  408 (431)
Q Consensus       403 L~~H~~  408 (431)
                      |..|+.
T Consensus       109 ~~~H~~  114 (127)
T 1zu1_A          109 AESHYI  114 (127)
T ss_dssp             HHHHHT
T ss_pred             HHHHHC
Confidence            999974

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.86  E-value=0.021  Score=35.32  Aligned_cols=23  Identities=26%  Similarity=0.511  Sum_probs=14.9

Q ss_pred             CCCcccccccccCChHHHHHHHH
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMK  408 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~  408 (431)
                      .+|.|+-|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            34666666666666666666665

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.77  E-value=0.021  Score=35.37  Aligned_cols=24  Identities=25%  Similarity=0.355  Sum_probs=18.5

Q ss_pred             CcccccccccccCCHHHHHHHHHH
Q psy8466         359 IRYKCDLCSKEFSWKGHLTEHRKL  382 (431)
Q Consensus       359 ~~~~C~~C~~~f~~~~~L~~H~~~  382 (431)
                      .+|.|+.|+..|.....|+.||+.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            367788888888888888888773

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.39  E-value=0.0099  Score=46.13  Aligned_cols=27  Identities=22%  Similarity=0.284  Sum_probs=20.2

Q ss_pred             hhCCC-cccccccccccCCHHHHHHHHH
Q psy8466         355 LHQGI-RYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       355 ~h~~~-~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      .|+|. ||.|..|++.|.+...|..|++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            35554 7888888888888888888866

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.34  E-value=0.0078  Score=46.70  Aligned_cols=29  Identities=17%  Similarity=0.310  Sum_probs=25.2

Q ss_pred             HhCCCC-CcccccccccCChHHHHHHHHhc
Q psy8466         382 LHQDIK-NKCDLCSKEFSSKRILTEHMKLH  410 (431)
Q Consensus       382 ~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H  410 (431)
                      .|+|.+ |.|..|++.|.+...|..|+++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            456666 99999999999999999998764

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.15  E-value=0.05  Score=42.81  Aligned_cols=72  Identities=19%  Similarity=0.277  Sum_probs=44.7

Q ss_pred             cccccccccccCChHHHHHHH--HHhcCCC--Cccccc------ccccCCHHHHHHHHHHhcC-CCCccCccCcccCCHh
Q psy8466         171 RYKCDLCSKKFSTKSYLTAHM--KLHQGLK--NKCDLC------SKEFSSKSYLTEHMKLHQG-IKNKCDLCSKEFSTKS  239 (431)
Q Consensus       171 ~~~C~~C~~~f~~~~~L~~H~--~~h~~~~--~~C~~C------~~~f~~~~~L~~H~~~h~~-~~~~C~~C~~~f~~~~  239 (431)
                      ++.|.+|+..|.+...+..|.  +.|....  +.+..+      ++.+....    +...+.+ ..+.|.+|++.|.+..
T Consensus        32 ~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~~  107 (127)
T 1zu1_A           32 DTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSPV  107 (127)
T ss_dssp             SSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSHH
T ss_pred             CCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCHH
Confidence            688999999999999999998  4553210  222100      11222110    1111111 2367999999999999


Q ss_pred             HHHHHHH
Q psy8466         240 YLTEHMK  246 (431)
Q Consensus       240 ~L~~H~~  246 (431)
                      .|..|..
T Consensus       108 ~~~~H~~  114 (127)
T 1zu1_A          108 VAESHYI  114 (127)
T ss_dssp             HHHHHHT
T ss_pred             HHHHHHC
Confidence            9999975

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.22  E-value=0.014  Score=48.68  Aligned_cols=73  Identities=16%  Similarity=0.230  Sum_probs=37.3

Q ss_pred             chhhccCChhHHHHHHHHhcCCCCccccchhccCCchHHHHHHhh-hCCCcccccccccccCCHHHHHHHHHHhCCC
Q psy8466         311 LCSKEFSRKSYLTEHMKLHQGIKNKCDLCSKEFSHKSNLTKHMNL-HQGIRYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       311 ~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~k~f~~~~~L~~H~~~-h~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      .|+..+. ...|..|...-.-....|+.|+..+ ....|..|+.. ....+-.|+.|+..+ ....|..|..++.|.
T Consensus        89 GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~-~~~~l~~H~~~~~~~  162 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASM-AFEDKEIHDQNCPLA  162 (170)
T ss_dssp             TCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEE-EGGGHHHHHTTCCC-
T ss_pred             CCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCcc-CHHHHHhHHHhCcCh
Confidence            3444332 3345555432222223566666665 44556666643 333345666676655 334566666666554

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=87.17  E-value=0.46  Score=27.43  Aligned_cols=22  Identities=23%  Similarity=0.490  Sum_probs=16.0

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      .|.|++|.+.|.+...|..|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHH
T ss_pred             ccCCcHHHHHcCCHHHHHHHHH
Confidence            3677777777777777777754

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=83.75  E-value=0.79  Score=26.45  Aligned_cols=26  Identities=19%  Similarity=0.416  Sum_probs=21.3

Q ss_pred             cccccccccccCChHHHHHHHHHhcC
Q psy8466         171 RYKCDLCSKKFSTKSYLTAHMKLHQG  196 (431)
Q Consensus       171 ~~~C~~C~~~f~~~~~L~~H~~~h~~  196 (431)
                      .|.|+.|.+.|.+...|..|....|.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            48899999999999999999876543

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=83.23  E-value=1.3  Score=24.74  Aligned_cols=24  Identities=25%  Similarity=0.677  Sum_probs=15.3

Q ss_pred             CcccccccccCChHHHHHHHHhcC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      -.|.+|.+.++...+|..|++.-+
T Consensus        10 qhcrfckkkysdvknlikhire~h   33 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAH   33 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhc
Confidence            356667777776666766666533

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=82.47  E-value=0.53  Score=33.69  Aligned_cols=22  Identities=32%  Similarity=0.610  Sum_probs=18.9

Q ss_pred             CcccccccccCChHHHHHHHHhcCC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      -.|-+||+.|..   |.+|+++|+|
T Consensus        22 iiClecGK~fK~---LkRHL~~~hg   43 (87)
T 2jsp_A           22 IVCLECGGSFKS---LKRHLTTHHS   43 (87)
T ss_dssp             EECTBTCCEESB---HHHHHHHTTC
T ss_pred             eEecccchhhHH---HHHHHHHccC
Confidence            379999999984   8899999887

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	431
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	4e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	1e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.001
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	3e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.003
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.004
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	7e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.002
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.002
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.002
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	8e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.004
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.002
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.004
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.004
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.003

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.0 bits (98), Expect = 3e-06
 Identities = 21/51 (41%), Positives = 27/51 (52%), Gaps = 2/51 (3%)

Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQG-LKNKCDLCSKEFSSKSYLTEHMKLH 221
           Y C  C K F+ KS    HM +H G     C +C K+F  K +L  HMK+H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (97), Expect = 4e-06
 Identities = 19/50 (38%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQG-IKNKCDLCSKEFSHKSNLTKHMNLH 356
            C  C K F+ KS    HM +H G     C +C K+F  K +L  HM +H
Sbjct: 5   PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (96), Expect = 5e-06
 Identities = 20/50 (40%), Positives = 25/50 (50%), Gaps = 2/50 (4%)

Query: 335 KCDLCSKEFSHKSNLTKHM-NLHQGIRYKCDLCSKEFSWKGHLTEHRKLH 383
            C  C K F+HKS   +HM        Y C +C K+F  K HL  H K+H
Sbjct: 5   PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (95), Expect = 9e-06
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQG-LKNKCDLCSKEFSRKSYLTEHMKLH 329
            C  C K F+ KS    HM +H G     C +C K+F  K +L  HMK+H
Sbjct: 5   PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 1e-05
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 200 KCDLCSKEFSSKSYLTEHMKLHQG-IKNKCDLCSKEFSTKSYLTEHMKLH 248
            C  C K F+ KS    HM +H G     C +C K+F  K +L  HMK+H
Sbjct: 5   PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 1e-05
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 227 KCDLCSKEFSTKSYLTEHMKLHQG-IKNKCDLCSKEFSTKSYLTEHMKLH 275
            C  C K F+ KS    HM +H G     C +C K+F  K +L  HMK+H
Sbjct: 5   PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (94), Expect = 1e-05
 Identities = 20/50 (40%), Positives = 26/50 (52%), Gaps = 2/50 (4%)

Query: 254 KCDLCSKEFSTKSYLTEHMKLHQG-IKNKCDLCSKEFSTKSYLTEHMKLH 302
            C  C K F+ KS    HM +H G     C +C K+F  K +L  HMK+H
Sbjct: 5   PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 2e-05
 Identities = 17/51 (33%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 361 YKCDLCSKEFSWKGHLTEH-RKLHQDIKNKCDLCSKEFSSKRILTEHMKLH 410
           Y C  C K F+ K     H           C +C K+F  K  L  HMK+H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 3e-04
 Identities = 13/31 (41%), Positives = 16/31 (51%), Gaps = 1/31 (3%)

Query: 167 HQGVR-YKCDLCSKKFSTKSYLTAHMKLHQG 196
           H G + Y C  C K FS  S L  H ++H G
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 0.001
 Identities = 11/24 (45%), Positives = 14/24 (58%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQG 331
            C  C K FSR S L +H ++H G
Sbjct: 9   GCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.1 bits (79), Expect = 0.001
 Identities = 10/24 (41%), Positives = 12/24 (50%)

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQG 358
            C  C K FS  S L +H  +H G
Sbjct: 9   GCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 9/23 (39%), Positives = 13/23 (56%)

Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
           Y C  C K FS    L +H+++H
Sbjct: 8   YGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.003
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 200 KCDLCSKEFSSKSYLTEHMKLHQG 223
            C  C K FS  S L +H ++H G
Sbjct: 9   GCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.003
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 227 KCDLCSKEFSTKSYLTEHMKLHQG 250
            C  C K FS  S L +H ++H G
Sbjct: 9   GCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.003
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 254 KCDLCSKEFSTKSYLTEHMKLHQG 277
            C  C K FS  S L +H ++H G
Sbjct: 9   GCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.003
 Identities = 10/24 (41%), Positives = 13/24 (54%)

Query: 281 KCDLCSKEFSTKSYLTEHMKLHQG 304
            C  C K FS  S L +H ++H G
Sbjct: 9   GCVECGKAFSRSSILVQHQRVHTG 32

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 3e-04
 Identities = 14/36 (38%), Positives = 18/36 (50%), Gaps = 1/36 (2%)

Query: 162 KHMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQG 196
           +     +  R YKCD C K FS  S L+ H + H G
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.003
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 1/35 (2%)

Query: 325 HMKLHQGIKN-KCDLCSKEFSHKSNLTKHMNLHQG 358
                +  +  KCD C K FSH S+L+KH   H G
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.8 bits (75), Expect = 0.004
 Identities = 12/35 (34%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 298 HMKLHQGLKN-KCDLCSKEFSRKSYLTEHMKLHQG 331
                +  +  KCD C K FS  S L++H + H G
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.5 bits (80), Expect = 7e-04
 Identities = 9/25 (36%), Positives = 16/25 (64%)

Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQG 196
           ++C +C + FS   +LT H++ H G
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 10/24 (41%), Positives = 16/24 (66%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQG 331
           +C +C + FSR  +LT H++ H G
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.4 bits (77), Expect = 0.002
 Identities = 9/23 (39%), Positives = 14/23 (60%)

Query: 361 YKCDLCSKEFSWKGHLTEHRKLH 383
           ++C +C + FS   HLT H + H
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTH 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.0 bits (76), Expect = 0.002
 Identities = 9/24 (37%), Positives = 14/24 (58%)

Query: 335 KCDLCSKEFSHKSNLTKHMNLHQG 358
           +C +C + FS   +LT H+  H G
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTG 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.5 bits (80), Expect = 8e-04
 Identities = 7/27 (25%), Positives = 16/27 (59%)

Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
           + C++C++ F+ + +L  H + H   K
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.8 bits (78), Expect = 0.001
 Identities = 8/26 (30%), Positives = 16/26 (61%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK 333
            C++C++ F+R+ +L  H + H   K
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEK 29

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (79), Expect = 0.001
 Identities = 9/33 (27%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 163 HMKLHQGVR-YKCDLCSKKFSTKSYLTAHMKLH 194
             +   G++ ++C  C + FS   +L  H K H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.8 bits (75), Expect = 0.004
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 352 HMNLHQGIR-YKCDLCSKEFSWKGHLTEHRKLH 383
                 GI+ ++C  C + FS   HL  HRK H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 11/33 (33%), Positives = 14/33 (42%), Gaps = 1/33 (3%)

Query: 165 KLHQGVR-YKCDLCSKKFSTKSYLTAHMKLHQG 196
           + H G + Y C  C K F  K  L  H K +  
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 10/25 (40%), Positives = 11/25 (44%)

Query: 361 YKCDLCSKEFSWKGHLTEHRKLHQD 385
           Y C  C K F  K  L  H K + D
Sbjct: 9   YACSHCDKTFRQKQLLDMHFKRYHD 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 10/36 (27%), Positives = 13/36 (36%), Gaps = 1/36 (2%)

Query: 327 KLHQGIK-NKCDLCSKEFSHKSNLTKHMNLHQGIRY 361
           + H G K   C  C K F  K  L  H   +    +
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF 36

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.8 bits (78), Expect = 0.002
 Identities = 11/33 (33%), Positives = 16/33 (48%), Gaps = 2/33 (6%)

Query: 335 KCDLCSKEFSHKSNLTKHM-NLHQGIR-YKCDL 365
            C  C K FS   +L  H+  +H   R +KC +
Sbjct: 7   ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.002
 Identities = 10/27 (37%), Positives = 15/27 (55%)

Query: 172 YKCDLCSKKFSTKSYLTAHMKLHQGLK 198
           + C  C K+F    +L+ H+K HQ  K
Sbjct: 3   FACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.004
 Identities = 11/26 (42%), Positives = 15/26 (57%)

Query: 308 KCDLCSKEFSRKSYLTEHMKLHQGIK 333
            C  C K F R  +L++H+K HQ  K
Sbjct: 4   ACPECPKRFMRSDHLSKHIKTHQNKK 29

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.003
 Identities = 12/33 (36%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 333 KNKCDLCSKEFSHKSNLTKHMNLHQGIR-YKCD 364
                 C K F+ K +L +HM LH   R Y C+
Sbjct: 3   SCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	431
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.54
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.43
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.05
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.03
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.01
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.0
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.97
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.96
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.95
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.93
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.93
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.92
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.9
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.87
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.86
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.81
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.8
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.78
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.75
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.75
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.73
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.73
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.72
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.71
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.64
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.62
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.61
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.6
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.57
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.55
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.51
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.5
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.46
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.37
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.35
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.32
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.31
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.3
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.23
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.2
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.18
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.12
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.9
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.8
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.69
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.67
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.61
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.6
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.59
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.59
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.55
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.55
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.54
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.48
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.45
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.38
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.38
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.37
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.36
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.27
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.25
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.13
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.07
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.03
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.82
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.73
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.58
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.58
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.57
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.54
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.51
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.51
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.47
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.38
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.23
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.1
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.97
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.86
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.67
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.54
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.49
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	95.47
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.29
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.25
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.19
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.94
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.92
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.91
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.8
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.66
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.36
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.2
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.07
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	94.03
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.91
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.85
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	93.83
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.2
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.62
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	92.36
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.89
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.64
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.13
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.8
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	90.74
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.63
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	90.4
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	89.66
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	87.91
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	85.88
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	85.59
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	85.3
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	84.25
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	81.84
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	81.8
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	81.72
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	81.36
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	80.41

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.54  E-value=1.5e-15  Score=100.33  Aligned_cols=51  Identities=35%  Similarity=0.774  Sum_probs=44.4

Q ss_pred             CcccccccccccCCHHHHHHHHHHhCCCC-CcccccccccCChHHHHHHHHhc
Q psy8466         359 IRYKCDLCSKEFSWKGHLTEHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLH  410 (431)
Q Consensus       359 ~~~~C~~C~~~f~~~~~L~~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H  410 (431)
                      +||.|+ ||++|.....|..|+++|+|++ |.|.+||++|.+.+.|..||++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            478894 9999999999999988998887 88999999999999999998877

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=2.3e-14  Score=94.45  Aligned_cols=49  Identities=45%  Similarity=0.975  Sum_probs=42.9

Q ss_pred             CccccchhccCCchHHHHHHhhhCCC-cccccccccccCCHHHHHHHHHHh
Q psy8466         334 NKCDLCSKEFSHKSNLTKHMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       334 ~~C~~C~k~f~~~~~L~~H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H  383 (431)
                      |.|. ||++|.....|..|+++|+|+ ||.|++||++|.+.+.|..|+++|
T Consensus         4 y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           4 YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             EECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            7885 999999999999999998887 799999999999999999998877

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=1.6e-11  Score=73.59  Aligned_cols=34  Identities=38%  Similarity=0.693  Sum_probs=19.1

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhCC
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      |+++|+++ ||.|+.||++|.+.++|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            45555554 55555555555555555555555554

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.03  E-value=5.2e-11  Score=71.09  Aligned_cols=33  Identities=33%  Similarity=0.577  Sum_probs=21.1

Q ss_pred             CCCcccccccccCChHHHHHHHH-hcCC-CCCccC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMK-LHQG-ITYKCG  418 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~-~H~g-~~~~C~  418 (431)
                      ++|+|.+||++|.+.+.|+.||+ +|+| +||+|.
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            34666666666666666666654 4666 666665

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=1.9e-11  Score=73.19  Aligned_cols=35  Identities=31%  Similarity=0.589  Sum_probs=33.2

Q ss_pred             HHHHHhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         378 EHRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       378 ~H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|+++|++++ |.|++|||+|.+.+.|..|+++|+|
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            4788999988 9999999999999999999999998

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=9.5e-11  Score=69.03  Aligned_cols=33  Identities=36%  Similarity=0.530  Sum_probs=18.1

Q ss_pred             hhCCC-cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         355 LHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       355 ~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      +|+|+ ||+|.+||++|.+.+.|..|+++|+++.
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            45554 5555555555555555555555555443

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=1.1e-10  Score=68.71  Aligned_cols=35  Identities=29%  Similarity=0.559  Sum_probs=32.2

Q ss_pred             HHhCCCC-CcccccccccCChHHHHHHHHhcCCCCC
Q psy8466         381 KLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQGITY  415 (431)
Q Consensus       381 ~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g~~~  415 (431)
                      |+|+|++ |+|.+||++|.+++.|..|+++|++..|
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~f   36 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF   36 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCCC
Confidence            6899998 9999999999999999999999998544

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.6e-10  Score=66.15  Aligned_cols=30  Identities=37%  Similarity=0.739  Sum_probs=15.4

Q ss_pred             hCCC-cccccccccccCCHHHHHHHHHHhCC
Q psy8466         356 HQGI-RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       356 h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      |+|+ ||+|..||++|.+.+.|..|+++|+|
T Consensus         2 HTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           2 HSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             cCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            4443 45555555555555555555555544

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2e-10  Score=68.49  Aligned_cols=35  Identities=40%  Similarity=0.804  Sum_probs=28.7

Q ss_pred             CCcccccccccccCCHHHHHHHHH-HhCCCC-Ccccc
Q psy8466         358 GIRYKCDLCSKEFSWKGHLTEHRK-LHQDIK-NKCDL  392 (431)
Q Consensus       358 ~~~~~C~~C~~~f~~~~~L~~H~~-~H~~~~-~~C~~  392 (431)
                      ++||+|.+||++|.+.++|..|++ +|++++ |+|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            458888888888888888888875 788877 88864

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.93  E-value=1.7e-10  Score=66.03  Aligned_cols=31  Identities=39%  Similarity=0.739  Sum_probs=29.6

Q ss_pred             HhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         382 LHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       382 ~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|+|++ |+|..||++|.+++.|..|+++|+|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            588888 9999999999999999999999998

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.93  E-value=2.7e-10  Score=63.23  Aligned_cols=28  Identities=29%  Similarity=0.787  Sum_probs=17.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      ||.|++||++|.+.+.|..|+++|+|++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCCC
Confidence            5666666666666666666666666553

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.92  E-value=1.7e-10  Score=68.46  Aligned_cols=33  Identities=36%  Similarity=0.659  Sum_probs=18.6

Q ss_pred             HHhhhCCC-cccccccccccCCHHHHHHHHHHhC
Q psy8466         352 HMNLHQGI-RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       352 H~~~h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      |.|+|+|+ ||+|++|+++|.+++.|..|+++|.
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~   35 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM   35 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGT
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCc
Confidence            44555554 5555555555555555555555554

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=1.5e-10  Score=68.72  Aligned_cols=34  Identities=29%  Similarity=0.387  Sum_probs=31.9

Q ss_pred             HHHHhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         379 HRKLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       379 H~~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.|+|+|++ |+|.+|+++|.+++.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            678999998 9999999999999999999999975

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.87  E-value=3.8e-10  Score=62.47  Aligned_cols=27  Identities=37%  Similarity=0.767  Sum_probs=13.9

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|++||++|.+++.|..|+++|+|+
T Consensus         2 py~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           2 KFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CEECCcCCCeecchHHhhhhcCccCCc
Confidence            455555555555555555555555544

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=3.7e-10  Score=66.08  Aligned_cols=32  Identities=44%  Similarity=0.798  Sum_probs=24.1

Q ss_pred             Ccccc--cccccCChHHHHHHHHhcCC-CCCccCc
Q psy8466         388 NKCDL--CSKEFSSKRILTEHMKLHQG-ITYKCGL  419 (431)
Q Consensus       388 ~~C~~--C~~~F~~~~~L~~H~~~H~g-~~~~C~~  419 (431)
                      |.|++  |+++|.+++.|+.|+++|+| +||+|++
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            45665  88888888888888888887 7788753

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.81  E-value=7.1e-10  Score=60.67  Aligned_cols=25  Identities=36%  Similarity=0.861  Sum_probs=12.3

Q ss_pred             cccccccccccCCHHHHHHHHHHhC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      ||+|++|+++|.+++.|..|+|+|+
T Consensus         3 Py~C~~C~k~F~~~~~L~~H~r~HT   27 (28)
T d1a1ia2           3 PFQCRICMRNFSRSDHLTTHIRTHT   27 (28)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHH
T ss_pred             CccCCCCcCEecccccccccCCCcc
Confidence            4444444444444444444444444

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.80  E-value=6.9e-10  Score=60.71  Aligned_cols=27  Identities=33%  Similarity=0.727  Sum_probs=25.6

Q ss_pred             CCCcccccccccCChHHHHHHHHhcCC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ++|+|++|+++|.+++.|..|+++|+|
T Consensus         2 KPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           2 KPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             cCccCCCCcCEecccccccccCCCccC
Confidence            459999999999999999999999997

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.78  E-value=1.4e-09  Score=62.97  Aligned_cols=30  Identities=30%  Similarity=0.660  Sum_probs=17.8

Q ss_pred             hCCC-cccccccccccCCHHHHHHHHHHhCC
Q psy8466         356 HQGI-RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       356 h~~~-~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      |+|+ ||+|++|++.|.++++|.+|+++|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            3443 56666666666666666666666654

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1.3e-09  Score=57.99  Aligned_cols=24  Identities=42%  Similarity=0.826  Sum_probs=16.3

Q ss_pred             cccccccccccCCHHHHHHHHHHh
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H  383 (431)
                      ||+|..||++|.+.+.|..|+|+|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            566666666666666666666666

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.75  E-value=2.2e-09  Score=59.42  Aligned_cols=27  Identities=22%  Similarity=0.608  Sum_probs=25.7

Q ss_pred             CCcccccccccCChHHHHHHHHhcCCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQGI  413 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g~  413 (431)
                      +|.|++|+++|.+.+.|..|+++|+|.
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             cCCCCCCCCCCCCchHcccccCcccCC
Confidence            699999999999999999999999983

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.73  E-value=1.8e-09  Score=62.51  Aligned_cols=30  Identities=23%  Similarity=0.541  Sum_probs=28.2

Q ss_pred             hCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         383 HQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       383 H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |+|++ |+|.+|++.|.+++.|+.|+++|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            67877 9999999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.5e-09  Score=63.67  Aligned_cols=27  Identities=30%  Similarity=0.671  Sum_probs=14.9

Q ss_pred             hhCCC-cccccccccccCCHHHHHHHHH
Q psy8466         355 LHQGI-RYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       355 ~h~~~-~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      +|+|+ ||+|++|+++|+++++|..|++
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~   29 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHIL   29 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHH
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcc
Confidence            45554 5555555555555555555543

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=3e-09  Score=58.78  Aligned_cols=28  Identities=36%  Similarity=0.574  Sum_probs=26.0

Q ss_pred             CCCcccccccccCChHHHHHHHHhcCCC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQGI  413 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~g~  413 (431)
                      .+|.|++||++|.+++.|..|+++|+|.
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            3699999999999999999999999983

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.71  E-value=2.9e-09  Score=62.41  Aligned_cols=32  Identities=19%  Similarity=0.463  Sum_probs=26.0

Q ss_pred             HHhCCCC-CcccccccccCChHHHHHHHHhcCC
Q psy8466         381 KLHQDIK-NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       381 ~~H~~~~-~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |+|+|++ |+|++|+++|.+++.|+.|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            4688887 8888888888888888888876654

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.64  E-value=8.6e-10  Score=68.92  Aligned_cols=39  Identities=18%  Similarity=0.435  Sum_probs=22.6

Q ss_pred             HHHHHHhhhCCC-cccccc--cccccCCHHHHHHHHHHhCCCC
Q psy8466         348 NLTKHMNLHQGI-RYKCDL--CSKEFSWKGHLTEHRKLHQDIK  387 (431)
Q Consensus       348 ~L~~H~~~h~~~-~~~C~~--C~~~f~~~~~L~~H~~~H~~~~  387 (431)
                      .|..|++ |+++ ||.|.+  |+++|...+.|..|+++|+|++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            3444553 5554 566655  6666666666666666666553

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=9.8e-09  Score=57.00  Aligned_cols=26  Identities=31%  Similarity=0.601  Sum_probs=12.8

Q ss_pred             cccccc--cccccCCHHHHHHHHHHhCC
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~~~H~~  385 (431)
                      ||.|++  |+++|++.+.|..|+|+|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            444544  55555555555555554444

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=7.4e-09  Score=60.41  Aligned_cols=31  Identities=45%  Similarity=0.978  Sum_probs=21.4

Q ss_pred             ccccc--cccccCCHHHHHHHHHHhCCCC-Cccc
Q psy8466         361 YKCDL--CSKEFSWKGHLTEHRKLHQDIK-NKCD  391 (431)
Q Consensus       361 ~~C~~--C~~~f~~~~~L~~H~~~H~~~~-~~C~  391 (431)
                      |.|+.  ||++|.++..|++|+++|+|++ |+|+
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            55655  7777777777777777777666 6665

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.60  E-value=5.7e-09  Score=55.42  Aligned_cols=26  Identities=35%  Similarity=0.580  Sum_probs=24.2

Q ss_pred             CCCcccccccccCChHHHHHHHHhcC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      ++|+|..|||+|.+.+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            36899999999999999999999995

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.57  E-value=1.1e-08  Score=56.95  Aligned_cols=26  Identities=31%  Similarity=0.756  Sum_probs=14.7

Q ss_pred             cccccc--cccccCCHHHHHHHHHHhCC
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~~~H~~  385 (431)
                      ||.|++  ||++|++.+.|..|+|+|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            455544  55555555555555555554

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.55  E-value=2.2e-08  Score=55.58  Aligned_cols=26  Identities=35%  Similarity=0.777  Sum_probs=25.0

Q ss_pred             CCcccc--cccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDL--CSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~--C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|++  |+++|.+.+.|+.|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           2 PHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            699999  99999999999999999998

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.51  E-value=1.5e-09  Score=67.76  Aligned_cols=39  Identities=23%  Similarity=0.407  Sum_probs=33.9

Q ss_pred             HHHHHHHHHhCCCC-Ccccc--cccccCChHHHHHHHHhcCCC
Q psy8466         374 GHLTEHRKLHQDIK-NKCDL--CSKEFSSKRILTEHMKLHQGI  413 (431)
Q Consensus       374 ~~L~~H~~~H~~~~-~~C~~--C~~~F~~~~~L~~H~~~H~g~  413 (431)
                      +.|..|++ |++++ |.|.+  |+++|.+++.|..|+++|+|.
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            35666775 88888 99988  999999999999999999983

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=2.8e-08  Score=55.74  Aligned_cols=27  Identities=26%  Similarity=0.682  Sum_probs=15.5

Q ss_pred             ccccc--ccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCD--LCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~--~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      ||.|+  .||++|++.+.|..|+++|+|+
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            45553  3666666666666666666554

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.46  E-value=2.3e-08  Score=55.61  Aligned_cols=26  Identities=35%  Similarity=0.741  Sum_probs=24.7

Q ss_pred             CCcccc--cccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDL--CSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~--C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|++  |+++|.+.+.|+.|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            589988  99999999999999999998

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.37  E-value=4.8e-08  Score=53.64  Aligned_cols=25  Identities=36%  Similarity=0.864  Sum_probs=12.5

Q ss_pred             cccccc--cccccCCHHHHHHHHHHhC
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~~~H~  384 (431)
                      ||+|++  |+++|++.+.|.+|+|+|+
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccC
Confidence            455544  5555555555555555544

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.35  E-value=1e-07  Score=53.41  Aligned_cols=27  Identities=30%  Similarity=0.588  Sum_probs=24.7

Q ss_pred             CCccc--ccccccCChHHHHHHHHhcCCC
Q psy8466         387 KNKCD--LCSKEFSSKRILTEHMKLHQGI  413 (431)
Q Consensus       387 ~~~C~--~C~~~F~~~~~L~~H~~~H~g~  413 (431)
                      +|.|+  .|+++|.+.+.|..|+++|+|.
T Consensus         2 pf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             cCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            58996  5999999999999999999983

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=5.7e-08  Score=53.32  Aligned_cols=26  Identities=35%  Similarity=0.814  Sum_probs=24.6

Q ss_pred             CCcccc--cccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDL--CSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~--C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|++  |+++|.+.+.|+.|+++|+|
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccCC
Confidence            589988  99999999999999999987

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.5e-07  Score=47.17  Aligned_cols=24  Identities=50%  Similarity=0.960  Sum_probs=11.4

Q ss_pred             cccccccccCChHHHHHHHHhcCC
Q psy8466         389 KCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       389 ~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|++|++.|+++..|+.|||.|+|
T Consensus         3 kc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             ccchhhhHhcchhHHHHHhhccCC
Confidence            344444444444444444444443

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.30  E-value=1.5e-07  Score=47.10  Aligned_cols=26  Identities=38%  Similarity=0.709  Sum_probs=24.4

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      |.+|+.|++.|+++..|+.|+|.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            57899999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.23  E-value=1.4e-07  Score=51.06  Aligned_cols=24  Identities=33%  Similarity=0.707  Sum_probs=10.9

Q ss_pred             cccccc--cccccCCHHHHHHHHHHh
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~~~H  383 (431)
                      ||.|++  ||++|++.++|++|+|+|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            344444  444444444444444444

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.20  E-value=3.8e-07  Score=51.27  Aligned_cols=25  Identities=44%  Similarity=0.840  Sum_probs=12.3

Q ss_pred             cccccc--cccccCCHHHHHHHHHHhC
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~~~H~  384 (431)
                      ||.|++  |+++|++.+.|.+|+++|+
T Consensus         3 P~~C~~pgC~k~F~r~~~L~~H~r~Ht   29 (32)
T d1zfda_           3 PYSCDHPGCDKAFVRNHDLIRHKKSHQ   29 (32)
T ss_dssp             SBCCCCTTCCCCBSSSHHHHHHHGGGT
T ss_pred             CeECcCCCCCCeeCCHHHHHHHhhhcc
Confidence            444544  5555555555555555444

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=2.3e-07  Score=50.20  Aligned_cols=25  Identities=28%  Similarity=0.620  Sum_probs=23.6

Q ss_pred             CCcccc--cccccCChHHHHHHHHhcC
Q psy8466         387 KNKCDL--CSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       387 ~~~C~~--C~~~F~~~~~L~~H~~~H~  411 (431)
                      +|.|++  |||+|.+.+.|+.|+++|+
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            689988  9999999999999999996

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.12  E-value=6.3e-07  Score=50.32  Aligned_cols=28  Identities=36%  Similarity=0.523  Sum_probs=25.5

Q ss_pred             CCCcccc--cccccCChHHHHHHHHhcCCC
Q psy8466         386 IKNKCDL--CSKEFSSKRILTEHMKLHQGI  413 (431)
Q Consensus       386 ~~~~C~~--C~~~F~~~~~L~~H~~~H~g~  413 (431)
                      .+|.|++  |+++|++.+.|+.|+++|+.+
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            4699998  999999999999999999863

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.90  E-value=3.1e-06  Score=43.86  Aligned_cols=26  Identities=27%  Similarity=0.745  Sum_probs=18.4

Q ss_pred             CcccccccccccCCHHHHHHHHHHhC
Q psy8466         359 IRYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       359 ~~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      +||.|++||+.|+.....++|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            36777777777777777777777663

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=7.4e-06  Score=42.98  Aligned_cols=26  Identities=27%  Similarity=0.672  Sum_probs=14.1

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      ||.|++|+..|..+..+..|.|.|.|
T Consensus         3 p~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           3 PYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             SSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CcccchHHHHhhccccceEeeecccC
Confidence            45555555555555555555555543

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.69  E-value=1.5e-05  Score=41.13  Aligned_cols=26  Identities=23%  Similarity=0.542  Sum_probs=21.3

Q ss_pred             CCcccccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|+.||......+-|+.|+++|+|
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             CccccccCcccCCHHHHHHHHHHhcC
Confidence            47788888888888888888888887

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.67  E-value=1.9e-05  Score=40.74  Aligned_cols=26  Identities=27%  Similarity=0.567  Sum_probs=14.7

Q ss_pred             ccccccccccCCHHHHHHHHHHhCCC
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      |.|+.||......+-|+.|+|.|+++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            45555555555555555555555554

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.61  E-value=1.1e-05  Score=43.35  Aligned_cols=27  Identities=33%  Similarity=0.673  Sum_probs=16.3

Q ss_pred             cccccccccCChHHHHHHHHhcCC-CCC
Q psy8466         389 KCDLCSKEFSSKRILTEHMKLHQG-ITY  415 (431)
Q Consensus       389 ~C~~C~~~F~~~~~L~~H~~~H~g-~~~  415 (431)
                      .|..||+.|.....|.+|...|+| +||
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            466666666666666666666666 555

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.60  E-value=2.1e-05  Score=41.23  Aligned_cols=27  Identities=26%  Similarity=0.612  Sum_probs=25.5

Q ss_pred             CCCcccccccccCChHHHHHHHHhcCC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ++|.|++|+.+|.++..+..|.+.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            469999999999999999999999988

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.59  E-value=1.4e-05  Score=40.77  Aligned_cols=22  Identities=32%  Similarity=0.667  Sum_probs=9.5

Q ss_pred             ccccccccCCHHHHHHHHHHhC
Q psy8466         363 CDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       363 C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      |..||++|...+.|++|+.+|+
T Consensus         5 c~ecgkaf~essklkrh~lvht   26 (28)
T d1ubdc2           5 CAECGKAFVESSKLKRHQLVHT   26 (28)
T ss_dssp             CTTTCCEESSHHHHHHHGGGTS
T ss_pred             HHHHhHHHHHHHHHHHHhhccc
Confidence            4444444444444444444443

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.59  E-value=1.3e-05  Score=41.49  Aligned_cols=26  Identities=27%  Similarity=0.612  Sum_probs=23.9

Q ss_pred             CCCcccccccccCChHHHHHHHHhcC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      .+|.|.+||+.|.+....++|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            45899999999999999999999985

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.55  E-value=1.4e-05  Score=40.77  Aligned_cols=25  Identities=32%  Similarity=0.651  Sum_probs=23.5

Q ss_pred             CcccccccccCChHHHHHHHHhcCC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ..|..|||+|...+.|++|+.+|+|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4699999999999999999999997

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.55  E-value=3e-05  Score=38.89  Aligned_cols=25  Identities=32%  Similarity=0.501  Sum_probs=13.9

Q ss_pred             cccccccccCCHHHHHHHHHHhCCC
Q psy8466         362 KCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       362 ~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      +|+.|.+.|.++..|+.|-|.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=2.8e-05  Score=39.45  Aligned_cols=25  Identities=28%  Similarity=0.611  Sum_probs=16.2

Q ss_pred             cccccccccccCCHHHHHHHHHHhC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      ||+|..|..+-...++|..|+|+|.
T Consensus         3 p~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           3 PYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CcccccccchhcchhhHhhhhhccc
Confidence            5666666666666666666666664

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.48  E-value=3e-05  Score=39.70  Aligned_cols=26  Identities=27%  Similarity=0.547  Sum_probs=12.8

Q ss_pred             cccccccccccCCHHHHHHHHHHhCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      ||+|..|...-...+.|..|+|.|+|
T Consensus         3 pfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           3 PFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             cceeeecccccCCchheEEeeecccC
Confidence            44555555444445555555544443

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.45  E-value=2.5e-05  Score=39.96  Aligned_cols=27  Identities=30%  Similarity=0.551  Sum_probs=25.4

Q ss_pred             CCCcccccccccCChHHHHHHHHhcCC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      .+|+|.+|.+.-...+.|..|+++|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            469999999999999999999999998

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.38  E-value=9.8e-05  Score=36.96  Aligned_cols=25  Identities=40%  Similarity=0.777  Sum_probs=15.2

Q ss_pred             CCCCCCcccCCHHHHHHHHHHhCCC
Q psy8466         281 KCDLCSKEFSTKSYLTEHMKLHQGL  305 (431)
Q Consensus       281 ~C~~C~~~f~~~~~L~~H~~~h~~~  305 (431)
                      +|+.|.+.|.++..|+.|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4566666666666666666666654

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.38  E-value=5e-05  Score=37.40  Aligned_cols=23  Identities=43%  Similarity=1.008  Sum_probs=10.5

Q ss_pred             ccccccccccCCHHHHHHHHHHh
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~~H  383 (431)
                      |+|..|.++|..++.|.+|+|+|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            34444444444444444444444

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=4.9e-05  Score=39.90  Aligned_cols=25  Identities=32%  Similarity=0.724  Sum_probs=13.9

Q ss_pred             Ccccc--cccccCChHHHHHHHHhcCC
Q psy8466         388 NKCDL--CSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       388 ~~C~~--C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.|.+  |++++...++|+.|++.+||
T Consensus         3 Y~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           3 YVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             EECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             eecccCCCCcccCCHHHHHHHHHhhCC
Confidence            44444  55555566666666655544

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=3.9e-05  Score=41.21  Aligned_cols=27  Identities=33%  Similarity=0.710  Sum_probs=19.8

Q ss_pred             ccccchhccCCchHHHHHHhhhCCC-cc
Q psy8466         335 KCDLCSKEFSHKSNLTKHMNLHQGI-RY  361 (431)
Q Consensus       335 ~C~~C~k~f~~~~~L~~H~~~h~~~-~~  361 (431)
                      .|..||+.|.....|.+|...|+++ ||
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            5777777777777777777777775 55

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.27  E-value=6.9e-05  Score=36.89  Aligned_cols=24  Identities=38%  Similarity=0.879  Sum_probs=22.7

Q ss_pred             CcccccccccCChHHHHHHHHhcC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      |+|..|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            789999999999999999999985

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.25  E-value=9.5e-05  Score=38.78  Aligned_cols=25  Identities=32%  Similarity=0.652  Sum_probs=15.4

Q ss_pred             cccccc--cccccCCHHHHHHHHHHhC
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~~~H~  384 (431)
                      ||.|.+  |++++...++|+.|++.++
T Consensus         2 PY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           2 PYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CeecccCCCCcccCCHHHHHHHHHhhC
Confidence            566655  6666666666666666544

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.13  E-value=0.00013  Score=37.46  Aligned_cols=24  Identities=42%  Similarity=0.880  Sum_probs=17.3

Q ss_pred             cccccc--cccccCCHHHHHHHHHHh
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHRKLH  383 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~~~H  383 (431)
                      ||+|+.  |++.|+..+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            677765  777777777777777766

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.07  E-value=0.00013  Score=37.48  Aligned_cols=25  Identities=32%  Similarity=0.648  Sum_probs=21.2

Q ss_pred             CcccccccccCChHHHHHHHHhcCC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.|..|...|.++-.|+.||..|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            6788888888888888888888887

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.03  E-value=0.00019  Score=36.34  Aligned_cols=27  Identities=22%  Similarity=0.536  Sum_probs=24.4

Q ss_pred             CCCcccccccccCChHHHHHHHHhcCC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      ++|+|..|.+.-...+.|+.|+|+|..
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs~   28 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHSD   28 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSCC
T ss_pred             CCcccccccchhcchhhHhhhhhcccC
Confidence            358999999999999999999999963

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00031  Score=36.08  Aligned_cols=22  Identities=45%  Similarity=0.880  Sum_probs=13.6

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      ||.|..|..+|.++.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            4566666666666666666655

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.73  E-value=0.00035  Score=36.91  Aligned_cols=26  Identities=31%  Similarity=0.828  Sum_probs=16.6

Q ss_pred             cccccccccccCCHHHHHHHHH-HhCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK-LHQD  385 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~-~H~~  385 (431)
                      ||.|.+|++.|+++.-|.+|.+ .|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            5667777777777777777754 4443

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.58  E-value=0.00081  Score=34.70  Aligned_cols=22  Identities=27%  Similarity=0.545  Sum_probs=9.9

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      ||.|..|....+..++|+.|++
T Consensus         2 py~cqyc~yrsadssnlkthik   23 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIK   23 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHH
T ss_pred             Cccccccccccccchhhhhhhh
Confidence            3444444444444444444444

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.58  E-value=0.00047  Score=39.08  Aligned_cols=26  Identities=35%  Similarity=0.788  Sum_probs=22.1

Q ss_pred             CCcccccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      .|.|.+|++.|.+-.+|--||+.|..
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             ccCCCCCCCccCCcccccchHhhhcc
Confidence            47889999999999999999888865

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.57  E-value=0.0005  Score=35.20  Aligned_cols=24  Identities=38%  Similarity=0.654  Sum_probs=21.9

Q ss_pred             CCcccc--cccccCChHHHHHHHHhc
Q psy8466         387 KNKCDL--CSKEFSSKRILTEHMKLH  410 (431)
Q Consensus       387 ~~~C~~--C~~~F~~~~~L~~H~~~H  410 (431)
                      +|.|+.  |+++|...+.|++|.++|
T Consensus         3 py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           3 PYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CccCCccCccccccCHHHHhhhhhcc
Confidence            578876  999999999999999987

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.54  E-value=0.00079  Score=34.46  Aligned_cols=27  Identities=30%  Similarity=0.668  Sum_probs=22.3

Q ss_pred             cccccccccccCChHHHHHHHHHhcCC
Q psy8466         171 RYKCDLCSKKFSTKSYLTAHMKLHQGL  197 (431)
Q Consensus       171 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  197 (431)
                      .|.|..|...|..+-.|+.||..|+|+
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccCC
Confidence            478888888888888888888888763

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.51  E-value=0.00076  Score=38.18  Aligned_cols=27  Identities=30%  Similarity=0.658  Sum_probs=19.1

Q ss_pred             cccccccccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      .|.|.+|++.|.+...|--|++.|...
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             ccCCCCCCCccCCcccccchHhhhcch
Confidence            477777777777777777777777544

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.00061  Score=38.70  Aligned_cols=25  Identities=28%  Similarity=0.672  Sum_probs=18.6

Q ss_pred             CCC-CcccccccccCChHHHHHHHHh
Q psy8466         385 DIK-NKCDLCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       385 ~~~-~~C~~C~~~F~~~~~L~~H~~~  409 (431)
                      |.+ |.|.+|+|.|.++..+.+|...
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~~   27 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVTS   27 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhhh
Confidence            444 7888888888888888887643

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.47  E-value=0.00071  Score=34.74  Aligned_cols=23  Identities=48%  Similarity=0.833  Sum_probs=15.9

Q ss_pred             cccccccccccCChHHHHHHHHH
Q psy8466         171 RYKCDLCSKKFSTKSYLTAHMKL  193 (431)
Q Consensus       171 ~~~C~~C~~~f~~~~~L~~H~~~  193 (431)
                      ||.|..|+..|.++..|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56677777777777777777664

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.38  E-value=0.00041  Score=36.67  Aligned_cols=26  Identities=35%  Similarity=0.738  Sum_probs=15.3

Q ss_pred             cccccc--cccccCCHHHHHHHH-HHhCC
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHR-KLHQD  385 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~-~~H~~  385 (431)
                      ||.|..  |.++|++.++-..|+ |+|.+
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CccccCCChhhhhcchhhhhhhccccccC
Confidence            566655  666666666666664 55543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.23  E-value=0.0013  Score=37.31  Aligned_cols=23  Identities=30%  Similarity=0.975  Sum_probs=20.8

Q ss_pred             CcccccccccccCCHHHHHHHHH
Q psy8466         359 IRYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       359 ~~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      +||.|.+|++.|-+..++.+|.-
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhhh
Confidence            48999999999999999999964

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.10  E-value=0.0022  Score=33.00  Aligned_cols=26  Identities=19%  Similarity=0.436  Sum_probs=24.3

Q ss_pred             CCcccccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|+|.+|..+-...++|+.|+++.|+
T Consensus         2 py~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             Cccccccccccccchhhhhhhhcccc
Confidence            59999999999999999999999776

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.97  E-value=0.0021  Score=32.57  Aligned_cols=25  Identities=36%  Similarity=0.510  Sum_probs=18.0

Q ss_pred             cccccccccccCCHHHHHHHHHHhC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      |-+|+.|..+.+++..|+.|.|+|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            3467777777777777777777773

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.86  E-value=0.0024  Score=37.60  Aligned_cols=26  Identities=31%  Similarity=0.498  Sum_probs=23.2

Q ss_pred             CCcccccccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      -|.|..|+|.|.....|+.|...|.-
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG~   31 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHGV   31 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHTT
T ss_pred             eeeccccccccCCHHHHhHhHHhcCc
Confidence            38899999999999999999999853

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.67  E-value=0.003  Score=30.90  Aligned_cols=21  Identities=43%  Similarity=0.806  Sum_probs=13.3

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHR  380 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~  380 (431)
                      ||+|.-|...|-++.+|..|+
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            566666666666666666665

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.54  E-value=0.0039  Score=31.30  Aligned_cols=22  Identities=32%  Similarity=0.649  Sum_probs=14.8

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      ||+|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5667777777777777776643

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.49  E-value=0.0026  Score=32.62  Aligned_cols=20  Identities=40%  Similarity=0.620  Sum_probs=9.1

Q ss_pred             cccccCCHHHHHHHHHHhCC
Q psy8466         366 CSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       366 C~~~f~~~~~L~~H~~~H~~  385 (431)
                      |.+.|.+...|.+|..+|+|
T Consensus        10 c~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2          10 CEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             CCCEESSTTHHHHHHHHHHT
T ss_pred             ccccchhhhhhhhhhccccC
Confidence            44444444444444444433

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.47  E-value=0.0046  Score=34.57  Aligned_cols=27  Identities=26%  Similarity=0.619  Sum_probs=21.7

Q ss_pred             CCcccc--cccccccCCHHHHHHHHHHhC
Q psy8466         358 GIRYKC--DLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       358 ~~~~~C--~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      .+||.|  +-|+.+|.+...|..|.+.|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            358888  558888988888888888774

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.29  E-value=0.0037  Score=32.14  Aligned_cols=22  Identities=32%  Similarity=0.676  Sum_probs=10.7

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      ||+|..|..-..+.++|..|++
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~k   23 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMK   23 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHH
Confidence            4445555444444555555544

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.25  E-value=0.0043  Score=32.68  Aligned_cols=23  Identities=30%  Similarity=0.805  Sum_probs=16.7

Q ss_pred             cccccccccccCChHHHHHHHHH
Q psy8466         171 RYKCDLCSKKFSTKSYLTAHMKL  193 (431)
Q Consensus       171 ~~~C~~C~~~f~~~~~L~~H~~~  193 (431)
                      ||.|.+|++.|..+..|.+|...
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qK   23 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQK   23 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTT
T ss_pred             CcccccccchhhHHHHHHHHHHH
Confidence            57777777777777777777653

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.19  E-value=0.0068  Score=29.61  Aligned_cols=23  Identities=43%  Similarity=0.782  Sum_probs=19.5

Q ss_pred             cccccccccccCChHHHHHHHHH
Q psy8466         171 RYKCDLCSKKFSTKSYLTAHMKL  193 (431)
Q Consensus       171 ~~~C~~C~~~f~~~~~L~~H~~~  193 (431)
                      ||+|..|...|..+..|..||..
T Consensus         2 pykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHHh
Confidence            78899999999999999888753

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.94  E-value=0.0098  Score=29.16  Aligned_cols=21  Identities=48%  Similarity=0.942  Sum_probs=12.9

Q ss_pred             ccccccccccCCHHHHHHHHH
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      |.|+.|-+.|+++.++..|.+
T Consensus         2 ypcp~cfkeftrkdnm~ahvk   22 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVK   22 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEE
Confidence            456666666666666666655

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.92  E-value=0.0066  Score=29.79  Aligned_cols=23  Identities=39%  Similarity=0.745  Sum_probs=21.0

Q ss_pred             CcccccccccCChHHHHHHHHhc
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLH  410 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H  410 (431)
                      |.|++|-+.|+++.++..|.++-
T Consensus         2 ypcp~cfkeftrkdnm~ahvkii   24 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKII   24 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEEe
Confidence            68999999999999999998763

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.91  E-value=0.0063  Score=31.23  Aligned_cols=27  Identities=33%  Similarity=0.546  Sum_probs=18.1

Q ss_pred             CCCcccccccccCChHHHHHHHHhcCC
Q psy8466         386 IKNKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       386 ~~~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      .+|+|.+|.....+.++|..|++.-||
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            036777777777777777777765443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.80  E-value=0.0048  Score=31.63  Aligned_cols=26  Identities=38%  Similarity=0.599  Sum_probs=23.2

Q ss_pred             CCcccc--cccccCChHHHHHHHHhcCC
Q psy8466         387 KNKCDL--CSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       387 ~~~C~~--C~~~F~~~~~L~~H~~~H~g  412 (431)
                      +|.|.+  |.|.|.+.-.|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            467765  99999999999999999987

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.66  E-value=0.0077  Score=30.44  Aligned_cols=23  Identities=43%  Similarity=0.635  Sum_probs=21.6

Q ss_pred             cccccccccCChHHHHHHHHhcC
Q psy8466         389 KCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       389 ~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      +|+.|.++.+++..|+.|.|+|-
T Consensus         4 kc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGGC
T ss_pred             cCcccccccCcHHHHHHhhcccc
Confidence            69999999999999999999984

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.36  E-value=0.014  Score=29.37  Aligned_cols=21  Identities=24%  Similarity=0.585  Sum_probs=11.4

Q ss_pred             ccccccccccCCHHHHHHHHH
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      |+|+.|+...+++++|..|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            455555555555555555554

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.20  E-value=0.0055  Score=32.25  Aligned_cols=25  Identities=32%  Similarity=0.583  Sum_probs=21.7

Q ss_pred             CCcccc--cccccCChHHHHHHH-HhcC
Q psy8466         387 KNKCDL--CSKEFSSKRILTEHM-KLHQ  411 (431)
Q Consensus       387 ~~~C~~--C~~~F~~~~~L~~H~-~~H~  411 (431)
                      +|.|.+  |.|.|++.+.-..|+ |+|.
T Consensus         2 PY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           2 PYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CccccCCChhhhhcchhhhhhhcccccc
Confidence            578887  999999999999998 7775

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.07  E-value=0.016  Score=34.05  Aligned_cols=25  Identities=32%  Similarity=0.595  Sum_probs=21.9

Q ss_pred             cccccccccccCCHHHHHHHHHHhC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      -|.|..|||.|+....|+.|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4889999999999999999988773

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.03  E-value=0.015  Score=29.22  Aligned_cols=23  Identities=26%  Similarity=0.455  Sum_probs=16.4

Q ss_pred             CCcccccccccCChHHHHHHHHh
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~  409 (431)
                      +|+|+.|+....+++.|+.|++.
T Consensus         2 k~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CccCCcchhheeehhhhhHHhhh
Confidence            04677777777777777777765

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.91  E-value=0.017  Score=31.06  Aligned_cols=25  Identities=24%  Similarity=0.567  Sum_probs=15.5

Q ss_pred             CcccccccccCChHHHHHHHHhcCC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.|..|||.|.++..+.+|-...+|
T Consensus         5 fvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCC
Confidence            5566666666666666666655554

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.85  E-value=0.021  Score=30.67  Aligned_cols=25  Identities=20%  Similarity=0.578  Sum_probs=19.2

Q ss_pred             ccccccccccCCHHHHHHHHHHhCC
Q psy8466         361 YKCDLCSKEFSWKGHLTEHRKLHQD  385 (431)
Q Consensus       361 ~~C~~C~~~f~~~~~L~~H~~~H~~  385 (431)
                      |.|..||+.|.+...+.+|...-.|
T Consensus         5 fvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             EECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeecccccchhcchHHHHHhhhcCC
Confidence            7788888888888888888765544

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=93.83  E-value=0.027  Score=28.17  Aligned_cols=23  Identities=30%  Similarity=0.420  Sum_probs=20.2

Q ss_pred             CCcccccccccCChHHHHHHHHh
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~~  409 (431)
                      +|+|..||+.+-++.+|..|..+
T Consensus         1 pf~c~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHHH
Confidence            47899999999999999999764

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.20  E-value=0.016  Score=28.92  Aligned_cols=19  Identities=32%  Similarity=0.511  Sum_probs=12.6

Q ss_pred             cccccCChHHHHHHHHhcC
Q psy8466         393 CSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       393 C~~~F~~~~~L~~H~~~H~  411 (431)
                      |++.|.....|+.|+.+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            6666666666666666654

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.62  E-value=0.025  Score=29.43  Aligned_cols=25  Identities=24%  Similarity=0.648  Sum_probs=15.0

Q ss_pred             Ccccc--cccccCChHHHHHHHHhcCC
Q psy8466         388 NKCDL--CSKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       388 ~~C~~--C~~~F~~~~~L~~H~~~H~g  412 (431)
                      |.|++  |+..|...+.|..|+-.|+|
T Consensus         4 ~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           4 YICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             EECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             eEeeCCCcchhhccchhhhHHhhhhcC
Confidence            44543  66666666666666666655

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.36  E-value=0.044  Score=30.52  Aligned_cols=27  Identities=22%  Similarity=0.581  Sum_probs=22.7

Q ss_pred             Cccccc--cccccccCChHHHHHHHHHhc
Q psy8466         169 GVRYKC--DLCSKKFSTKSYLTAHMKLHQ  195 (431)
Q Consensus       169 ~~~~~C--~~C~~~f~~~~~L~~H~~~h~  195 (431)
                      .+||.|  +-|+..|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            358999  679999999999999988774

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.89  E-value=0.03  Score=30.52  Aligned_cols=19  Identities=32%  Similarity=0.632  Sum_probs=14.3

Q ss_pred             ccccCChHHHHHHHHhcCC
Q psy8466         394 SKEFSSKRILTEHMKLHQG  412 (431)
Q Consensus       394 ~~~F~~~~~L~~H~~~H~g  412 (431)
                      ++.|..+..|..|||+|+|
T Consensus        14 ~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHC
T ss_pred             CCcchhHHHHHHHHhhcCC
Confidence            3567778888888888876

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.64  E-value=0.054  Score=29.47  Aligned_cols=19  Identities=32%  Similarity=0.574  Sum_probs=10.4

Q ss_pred             CcccCCHHHHHHHHHHhCC
Q psy8466         286 SKEFSTKSYLTEHMKLHQG  304 (431)
Q Consensus       286 ~~~f~~~~~L~~H~~~h~~  304 (431)
                      ++.|..+..|..|+|+|+|
T Consensus        14 ~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHC
T ss_pred             CCcchhHHHHHHHHhhcCC
Confidence            3445555555555555554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.13  E-value=0.055  Score=28.67  Aligned_cols=21  Identities=33%  Similarity=0.638  Sum_probs=15.4

Q ss_pred             cccccccccccCCHHHHHHHH
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHR  380 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~  380 (431)
                      +|-|.-||-.|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            477777777777777777774

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.80  E-value=0.067  Score=26.99  Aligned_cols=18  Identities=39%  Similarity=0.826  Sum_probs=10.4

Q ss_pred             chhccCCchHHHHHHhhh
Q psy8466         339 CSKEFSHKSNLTKHMNLH  356 (431)
Q Consensus       339 C~k~f~~~~~L~~H~~~h  356 (431)
                      |++.|+..+.+++|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            555555555555555554

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.74  E-value=0.057  Score=27.27  Aligned_cols=19  Identities=26%  Similarity=0.670  Sum_probs=14.5

Q ss_pred             cccccCChHHHHHHHHhcC
Q psy8466         393 CSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       393 C~~~F~~~~~L~~H~~~H~  411 (431)
                      |+|.|...+.++.|+-+|.
T Consensus         9 C~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGS
T ss_pred             HHHHhhchHHHHHHhhccC
Confidence            7777888888888777764

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.63  E-value=0.069  Score=28.30  Aligned_cols=22  Identities=32%  Similarity=0.481  Sum_probs=20.1

Q ss_pred             CCcccccccccCChHHHHHHHH
Q psy8466         387 KNKCDLCSKEFSSKRILTEHMK  408 (431)
Q Consensus       387 ~~~C~~C~~~F~~~~~L~~H~~  408 (431)
                      +|.|.-||-+|+..+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            4899999999999999999963

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=90.40  E-value=0.084  Score=27.38  Aligned_cols=27  Identities=26%  Similarity=0.556  Sum_probs=18.8

Q ss_pred             cccccc--cccccCCHHHHHHHHHHhCCC
Q psy8466         360 RYKCDL--CSKEFSWKGHLTEHRKLHQDI  386 (431)
Q Consensus       360 ~~~C~~--C~~~f~~~~~L~~H~~~H~~~  386 (431)
                      +|.|..  |+..|.....|..|+-.|+|+
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            456643  777777777777777777663

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=89.66  E-value=0.081  Score=26.28  Aligned_cols=20  Identities=30%  Similarity=0.471  Sum_probs=14.2

Q ss_pred             ccccccCCHHHHHHHHHHhC
Q psy8466         365 LCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       365 ~C~~~f~~~~~L~~H~~~H~  384 (431)
                      .|+++|.....|+.|+-+|+
T Consensus         8 ~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           8 NCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             TCCCEESSHHHHHHHHHHHH
T ss_pred             CchHHHhhccceEEEeeccc
Confidence            37777777777777776664

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.91  E-value=0.38  Score=24.39  Aligned_cols=22  Identities=18%  Similarity=0.415  Sum_probs=10.6

Q ss_pred             CccCccCcccCCHhHHHHHHHH
Q psy8466         226 NKCDLCSKEFSTKSYLTEHMKL  247 (431)
Q Consensus       226 ~~C~~C~~~f~~~~~L~~H~~~  247 (431)
                      |.|..|++...+...++.|+..
T Consensus         3 ftc~hcgkqlks~~gmkyhvma   24 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMA   24 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHH
T ss_pred             eechhHHHHHhhccCceEEEee
Confidence            3444555555555555544443

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.88  E-value=0.071  Score=34.00  Aligned_cols=12  Identities=42%  Similarity=1.052  Sum_probs=5.2

Q ss_pred             ccccccccccCC
Q psy8466         361 YKCDLCSKEFSW  372 (431)
Q Consensus       361 ~~C~~C~~~f~~  372 (431)
                      |.|+.|+++|+.
T Consensus        15 y~Cp~C~~~ys~   26 (62)
T d1vd4a_          15 FKCPVCSSTFTD   26 (62)
T ss_dssp             EECSSSCCEEEH
T ss_pred             eECCCCCCCcch
Confidence            444444444433

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.59  E-value=0.11  Score=33.79  Aligned_cols=22  Identities=23%  Similarity=0.573  Sum_probs=16.0

Q ss_pred             CcccccccccCChHHHHHHHHh
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~  409 (431)
                      |.|..|++.|.+...|..|+++
T Consensus        16 fYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          16 HRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             SEETTTTEECSSHHHHHHHTTC
T ss_pred             EecccccCccCCHHHHHHHHcc
Confidence            5677777777777777777654

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.30  E-value=0.83  Score=23.10  Aligned_cols=20  Identities=20%  Similarity=0.527  Sum_probs=9.2

Q ss_pred             CCCCCCcccCCHHHHHHHHH
Q psy8466         281 KCDLCSKEFSTKSYLTEHMK  300 (431)
Q Consensus       281 ~C~~C~~~f~~~~~L~~H~~  300 (431)
                      .|..||+...+...++-|+.
T Consensus         4 tc~hcgkqlks~~gmkyhvm   23 (30)
T d2ctda2           4 TCHHCGKQLRSLAGMKYHVM   23 (30)
T ss_dssp             CCSSSCCCCSSHHHHHHHHH
T ss_pred             echhHHHHHhhccCceEEEe
Confidence            44444444444444444443

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=84.25  E-value=0.32  Score=24.54  Aligned_cols=18  Identities=33%  Similarity=0.626  Sum_probs=13.7

Q ss_pred             ccccccCChHHHHHHHHh
Q psy8466         392 LCSKEFSSKRILTEHMKL  409 (431)
Q Consensus       392 ~C~~~F~~~~~L~~H~~~  409 (431)
                      -||+.|+++..|..|.+-
T Consensus         7 gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           7 GCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             TTCCEESSHHHHHHHHHH
T ss_pred             CchhhhccHHHHHhHHHH
Confidence            388888888888887754

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.84  E-value=0.3  Score=30.58  Aligned_cols=24  Identities=29%  Similarity=0.702  Sum_probs=18.4

Q ss_pred             CcccccccccCChHHHHHHHHhcC
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQ  411 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~  411 (431)
                      |+|..|.-.|-....|..|+..|.
T Consensus        19 yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          19 YQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeechhHHHHhhHHHHHHHHHhcc
Confidence            677777777777777777777775

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=81.80  E-value=0.55  Score=25.07  Aligned_cols=22  Identities=23%  Similarity=0.732  Sum_probs=17.0

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      -|.|.+|.+.++..+++-+|.-
T Consensus         8 ~yRC~~C~r~YTHISNFCRHyv   29 (37)
T d2drpa1           8 TYRCKVCSRVYTHISNFCRHYV   29 (37)
T ss_dssp             EEECTTTCCEESSHHHHHHHHH
T ss_pred             EEEeehhhHHHHHHHHHHHHHH
Confidence            4778888888888888888855

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.72  E-value=0.14  Score=32.61  Aligned_cols=34  Identities=26%  Similarity=0.489  Sum_probs=24.9

Q ss_pred             CcccccccccCChHHHHHHHHhcCCCCCccCccccc
Q psy8466         388 NKCDLCSKEFSSKRILTEHMKLHQGITYKCGLCSKE  423 (431)
Q Consensus       388 ~~C~~C~~~F~~~~~L~~H~~~H~g~~~~C~~C~~~  423 (431)
                      |.|+.|+++|+....+..  .......|.|.+|+-.
T Consensus        15 y~Cp~C~~~ys~Lda~~L--~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          15 FKCPVCSSTFTDLEANQL--FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             EECSSSCCEEEHHHHHHH--EETTTTEEBCSSSCCB
T ss_pred             eECCCCCCCcchhhHHHh--cCcCCCeEEecCCCCE
Confidence            899999999987666553  2233356899999754

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=81.36  E-value=0.21  Score=32.28  Aligned_cols=22  Identities=23%  Similarity=0.409  Sum_probs=18.6

Q ss_pred             cccccccccccCCHHHHHHHHH
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRK  381 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~  381 (431)
                      .|.|..|++.|.+...|..|++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            3788999999999999988865

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.41  E-value=0.46  Score=29.70  Aligned_cols=25  Identities=28%  Similarity=0.709  Sum_probs=22.8

Q ss_pred             cccccccccccCCHHHHHHHHHHhC
Q psy8466         360 RYKCDLCSKEFSWKGHLTEHRKLHQ  384 (431)
Q Consensus       360 ~~~C~~C~~~f~~~~~L~~H~~~H~  384 (431)
                      -|+|..|.-.|.+...|..|+..|.
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHhcc
Confidence            4999999999999999999999884