Psyllid ID: psy8499

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-
Protein Sequence
MELNVEESKDHVGLSPPFYDPSRVIKHEPLDIPYEVMVKEESNESDRINIEENDWNDAVTRDCLEFFKSCPKVEVKSDHERRSINYKCQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMKLHLGI
Secondary Structure (PSIPRED)
cccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHccccccccccccccccccccccccHHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHcccccccccccccccccccccccHHHHHccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccHHHcccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccEEEEccccccccccccccccHHHEEEEccccccccccccccccEEEEccccccccccccccccEEccccHHHHHHHccccccccccccccccEEEEEEcccccccccccccccEccccHHHHHHHHccccEEEcccccccEccccHHHHHHHHcccccccccHccccEcccccHHHHHHHcccccccccccccEEcccccHHEHHHEccccccccccccccEccccHHHHHHHHcccccccccHccccEccccHHHHHHHHcccccccccHccccEccccHHHHHHHHccccccccccccccEccccHHHHHHHHccccccccccccccEccccHHHHHHHHcccccccccHccccEcccccHHHHEHHcccccccccccccEEcccccHHHHHHHcccccccccHccccEcccccHHHHHHHcccccccccHccccEccccHHHHHHHHccccccccccccccEccccHHHHHHHHcccccccccHccccEccccHHHHHHHHcccccccccHccccEccccHHHHHHHHcccccccccHccccEcccccHHEHHHHccccEEEccccccEEEcccHHHHHHHHcccc
Coil and Loop (DISEMBL)
melnveeskdhvglsppfydpsrvikhepldipyevmvkeesnesdrinieendwndavTRDCLEFFkscpkvevksdherrsinykcqesykrgklkkKLCQDigykcdlcskeysyKHTLTEHmklhqgirykcdlcskefsCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMkrhqgikykcnlcskefssksYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGiknkcnlcskefscksHLKEHMQVHQgitykcdlcskefyRKQNLTKHMKVhqgmknkcvlcskefssksYLTEHMKLHQGIknkcdlcskefscKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGiknkcnlcskefsckshLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQgikkkcdlcskefstkcsltehMKLHQgikkkcdlcskefsckrsVTEHMKLHLGIKNKCDLCSKEFSTKHTLTehmklhqgirykcdlctkefsrkgrltehmklhlgi
Flexible Loop (DISEMBL)
melnveeskdhvglsppfydpsrvIKHEPLDIPYEVmvkeesnesdrinieendwndaVTRDCLEFFKScpkvevksdherrsinykcqesykrgklkkklcQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMkvhqgmknkcVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLklhqgiknkcVLCSKEFSRKRRLTEHMklhlgiknkcnLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMkvhqgmknkcVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLklhqgiknkcVLCSKEFSRKRRLTEHMklhlgiknkcnLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMklhqgikkkcdlCSKEFSCKRSVTEHMKlhlgiknkcdlCSKEFSTKHTLtehmklhqgirykcDLCTKEFsrkgrltehmklhlgi
Low Complexity Region (SEG)
MELNVEESKDHVGLSPPFYDPSRVIKHEPLDIPYEVMVKEESNESDRINIEENDWNDAVTRDCLEFFKSCPKVEVKSDHERRSINYKCQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMKLHLGI
Disordered region (IsUnstruct)
************************I***PLDIPYEVM***********NIEENDWNDAVTRDCLEFFKSCPKVEVKS***RRSINYKCQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFS***************
Disordered Region (DISOPRED)
MELNVEESKDHVGLSPPFYDPSRVIKHEPLDIPYEV*************IEENDWNDAVTRDCLEFFKSCPKVEVKSDHERRSINYKCQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMKLHLG*
Disordered Region (DISEMBL)
************GLSPPFYDPSRVIKHEPLDIPYEVMVKEESNESDRINIEENDWNDAVTRDCLEFFKSCPKVEVKSDHERRSINYKCQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMKLHLGI
Disordered Region (DISPRO)
MELNVEESKDHVGLSPPFYDPSRVIKHEPLDIPYEVMVKEESNESDRINIEENDWNDAVTRDCLEFFKSCPKVEVKSDHERRSINYKCQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMKL****
Transmembrane Helix (TMHMM)
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Transmembrane Helix (HMMTOP)
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Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHoooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
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Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MELNVEESKDHVGLSPPFYDPSRVIKHEPLDIPYEVMVKEESNESDRINIEENDWNDAVTRDCLEFFKSCPKVEVKSDHERRSINYKCQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMKLHLGI
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	591	2.2.26 [Sep-21-2011]
Q5R8X1	613	Zinc finger protein 665 O	yes	N/A	0.818	0.789	0.405	7e-82
Q9H7R5	613	Zinc finger protein 665 O	yes	N/A	0.818	0.789	0.405	3e-81
Q8N4W9	903	Zinc finger protein 808 O	no	N/A	0.818	0.535	0.401	6e-80
Q5R5U3	672	Zinc finger protein 271 O	no	N/A	0.818	0.720	0.403	3e-79
Q9HCG1	818	Zinc finger protein 160 O	no	N/A	0.854	0.617	0.385	4e-79
Q14591	655	Zinc finger protein 271 O	no	N/A	0.849	0.766	0.394	3e-77
P10076	861	Zinc finger protein 26 OS	no	N/A	0.818	0.562	0.345	4e-77
Q96IR2	970	Zinc finger protein 845 O	no	N/A	0.854	0.520	0.406	5e-77
Q96SE7	839	Zinc finger protein 347 O	no	N/A	0.818	0.576	0.389	8e-77
Q99676	751	Zinc finger protein 184 O	no	N/A	0.820	0.645	0.382	4e-76

>sp|Q5R8X1|ZN665_PONAB Zinc finger protein 665 OS=Pongo abelii GN=ZNF665 PE=2 SV=1

 Score =  305 bits (781), Expect = 7e-82,   Method: Compositional matrix adjust.
 Identities = 203/501 (40%), Positives = 268/501 (53%), Gaps = 17/501 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           YKCD C K ++    LT H ++H G + Y+C+ C K F+ +  LT H  +H G K  KC 
Sbjct: 113 YKCDECGKVFNQNSRLTSHKRIHTGEKPYRCNECGKAFTVRSNLTIHQVIHTGEKPYKCN 172

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
            C K FS  S L  H + H G K YKCN C K F + S LT H  +H  E  YKC+ C K
Sbjct: 173 ECGKVFSQPSNLAGHQRIHTGEKPYKCNECGKAFRAHSKLTTHQVIHTGEKPYKCNECGK 232

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            ++   +L  H ++H G K  KC  C K FS +  LT H  +H G K  KCN C K F  
Sbjct: 233 CFTQNSHLASHRRIHTGEKPYKCNECGKAFSVRSSLTTHQTIHTGEKPYKCNECGKVFRH 292

Query: 281 KSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
            S+L +H +VH G   YKC+ C K F    NLTKH  +H G K  KC  C K F+  S+L
Sbjct: 293 NSYLTKHRRVHTGEKPYKCNECGKAFSMHSNLTKHQIIHTGEKPFKCNECVKVFTQYSHL 352

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
             H ++H G K  +CD C K FS +  +T H  +H  E  YKC+ C K ++   +L  H 
Sbjct: 353 ANHRRIHTGEKPYRCDECGKAFSVRSSLTTHQAIHTGEKPYKCNDCGKVFTQNSHLASHR 412

Query: 397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
            +H G K  KC  C K FS+  +L  H ++H G K  KCN C K FS  S L  H  +H 
Sbjct: 413 GIHSGEKPYKCDECGKAFSQTSQLARHWRVHTGEKPYKCNECGKAFSVHSSLTTHQTIHT 472

Query: 455 GI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
           G   YKCN C K F     L  H ++H G K  KC+ C K FS   +L  H  +H G K 
Sbjct: 473 GQKPYKCNDCGKVFRHNSYLAVHQRIHTGEKPYKCNECGKAFSVHSNLATHQVIHTGEKP 532

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
            KC+ C K F+    +  H ++H G K  +C+ C K FS + TLT HM +H G + YKC+
Sbjct: 533 YKCNECGKVFTQNSHLANHRRIHTGEKPYRCNECGKAFSVRSTLTTHMAIHTGDKPYKCN 592

Query: 570 LCTKEFSRKGRLTEHMKLHLG 590
            C K F++   L +H ++H G
Sbjct: 593 ECGKVFTQNSNLAKHRRIHSG 613

May be involved in transcriptional regulation.
Pongo abelii (taxid: 9601)

>sp|Q9H7R5|ZN665_HUMAN Zinc finger protein 665 OS=Homo sapiens GN=ZNF665 PE=2 SV=2

 Score =  303 bits (776), Expect = 3e-81,   Method: Compositional matrix adjust.
 Identities = 203/501 (40%), Positives = 267/501 (53%), Gaps = 17/501 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           YKCD C K +S    LT H ++H G + Y+C+ C K F+ +  LT H  +H G K  KC 
Sbjct: 113 YKCDECGKVFSQNSRLTSHKRIHTGEKPYQCNKCGKAFTVRSNLTIHQVIHTGEKPYKCN 172

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
            C K FS  S L  H + H G K YKCN C K F + S LT H  +H  E  YKC  C K
Sbjct: 173 ECGKVFSQPSNLAGHQRIHTGEKPYKCNECGKAFRAHSKLTTHQVIHTGEKPYKCKECGK 232

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            ++   +L  H ++H G K  KC  C K FS +  LT H  +H G K  KCN C K F  
Sbjct: 233 CFTQNSHLASHRRIHTGEKPYKCNECGKAFSVRSSLTTHQTIHTGEKPYKCNECGKVFRH 292

Query: 281 KSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
            S+L +H ++H G   YKC+ C K F    NLTKH  +H G K  KC  C K F+  S+L
Sbjct: 293 NSYLAKHRRIHTGEKPYKCNECGKAFSMHSNLTKHQIIHTGEKPFKCNECVKVFTQYSHL 352

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
             H ++H G K  +CD C K FS +  +T H  +H  E  YKC+ C K ++   +L  H 
Sbjct: 353 ANHRRIHTGEKPYRCDECGKAFSVRSSLTTHQAIHTGEKPYKCNDCGKVFTQNSHLASHR 412

Query: 397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
            +H G K  KC  C K FS+  +L  H ++H G K  KCN C K FS  S L  H  +H 
Sbjct: 413 GIHSGEKPYKCDECGKAFSQTSQLARHWRVHTGEKPYKCNECGKAFSVHSSLTIHQTIHT 472

Query: 455 GI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
           G   YKCN C K F     L  H ++H G K  KC+ C K FS   +L  H  +H G K 
Sbjct: 473 GQKPYKCNDCGKVFRHNSYLAIHQRIHTGEKPYKCNECGKAFSVHSNLATHQVIHTGEKP 532

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
            KC+ C K F+    +  H ++H G K  +C+ C K FS + TLT HM +H G + YKC+
Sbjct: 533 YKCNECGKVFTQNSHLANHRRIHTGEKPYRCNECGKAFSVRSTLTTHMAVHTGDKPYKCN 592

Query: 570 LCTKEFSRKGRLTEHMKLHLG 590
            C K F++   L +H ++H G
Sbjct: 593 QCGKVFTQNSNLAKHRRIHSG 613

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8N4W9|ZN808_HUMAN Zinc finger protein 808 OS=Homo sapiens GN=ZNF808 PE=2 SV=2

 Score =  298 bits (764), Expect = 6e-80,   Method: Compositional matrix adjust.
 Identities = 201/501 (40%), Positives = 278/501 (55%), Gaps = 17/501 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           YKC  C K +SYK +LT H +LH G++ YKC+ C K F     L  H  +H G K  KC 
Sbjct: 287 YKCKECGKSFSYKSSLTCHHRLHTGVKPYKCNECGKVFRQNSALVIHKAIHTGEKPYKCN 346

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
            C K F+ +S+L+ H + H G+K YKC +C K F+  SYL  H ++H  E TYKC+ C K
Sbjct: 347 ECGKAFNQQSHLSRHQRLHTGVKPYKCKICEKAFACHSYLANHTRIHSGEKTYKCNECGK 406

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            ++++  L  H  LH G K  KC  C K FS+K  L  H ++H G K  KC +C   F+C
Sbjct: 407 AFNHQSSLARHHILHTGEKPYKCEECDKVFSQKSTLERHKRIHTGEKPYKCKVCDTAFTC 466

Query: 281 KSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
            S L  H ++H G  TYKC+ C K F R+ +L  H ++H G K  KC  C   F  ++ L
Sbjct: 467 NSQLARHRRIHTGEKTYKCNECRKTFSRRSSLLCHRRLHSGEKPYKCNQCGNTFRHRASL 526

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHL 396
             H +LH   K+ KC +C+K F     +  H ++H  +  YKC+ C K ++ + +L+ H 
Sbjct: 527 VYHRRLHTLEKSYKCTVCNKVFMRNSVLAVHTRIHTAKKPYKCNECGKAFNQQSHLSRHR 586

Query: 397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
           +LH G K  KC  C K F +K  L  H ++H G K  +C +C   F+  S L  H ++H 
Sbjct: 587 RLHTGEKPYKCEACDKVFGQKSALESHKRIHTGEKPYRCQVCDTAFTWNSQLARHTRIHT 646

Query: 455 G-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
           G  TYKCN C K F  K +L  H +LH G K  KC +C K F  +  + +H ++H G+K 
Sbjct: 647 GEKTYKCNECGKTFSYKSSLVWHRRLHGGEKSYKCKVCDKAFVCRSYVAKHTRIHSGMKP 706

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
            KC+ CSK FS + S+  H ++H G K  KC  CSK FS K TL  H +LH G + YKC+
Sbjct: 707 YKCNECSKTFSNRSSLVCHRRIHSGEKPYKCSECSKTFSQKATLLCHRRLHSGEKPYKCN 766

Query: 570 LCTKEFSRKGRLTEHMKLHLG 590
            C   F     L  H +LH G
Sbjct: 767 DCGNTFRHWSSLVYHRRLHTG 787

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5R5U3|ZN271_PONAB Zinc finger protein 271 OS=Pongo abelii GN=ZNF271 PE=2 SV=1

 Score =  296 bits (758), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 202/501 (40%), Positives = 271/501 (54%), Gaps = 17/501 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           Y C+ C K +S    L +H ++H G + YKCD C K FS    L  H ++H G K  +C 
Sbjct: 135 YSCNWCIKSFSRSSDLIKHQRVHTGEKPYKCDECGKAFSQSSDLIIHQRIHTGEKPYQCS 194

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
            CSK FS +S L +H + H G K Y CN C+K FS  S + +H ++H  E  YKCD+C K
Sbjct: 195 HCSKSFSQRSDLVKHQRIHTGEKPYTCNQCNKHFSQSSDVIKHQRIHTGEKPYKCDVCAK 254

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            +S    L  H ++H G K   C  CSK FS+   L +H ++H G K  KCN C K F+ 
Sbjct: 255 AFSQSSDLILHQRIHTGEKPYPCNQCSKSFSQNSDLIKHRRIHTGEKPYKCNECGKAFNQ 314

Query: 281 KSHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
            S L  H ++H G   Y CD CSK F R  +L  H ++H G K   C  C+K FS +S L
Sbjct: 315 SSVLILHQRIHTGEKPYPCDQCSKTFSRLSDLINHQRIHTGEKPYPCNQCNKMFSRRSDL 374

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
            +H ++H G K  +CD C K FS    +  H ++H  E  Y C  C K +S +  L +H 
Sbjct: 375 VKHHRIHTGEKPYECDECGKTFSQSSNLILHQRIHTGEKPYPCSDCTKSFSRRSDLVKHQ 434

Query: 397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
           ++H G K   C  C K FS+   LT+H ++H G K   CN C K FS  S L  H ++H 
Sbjct: 435 RIHTGEKPYACNQCDKSFSQSSDLTKHQRVHSGEKPYHCNSCEKAFSQSSDLILHQRIHT 494

Query: 455 GI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
           G   Y C  CSK F +  +L KH ++H G K  KC  C K FS   +LT H ++H G K 
Sbjct: 495 GEKPYLCTQCSKSFSQNSDLIKHQRIHTGEKPYKCSECRKAFSQCSALTLHQRIHTGEKP 554

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
             C+ C K FS    +  H K+H G K  KCD C K FST   L EH K+H G + Y+C 
Sbjct: 555 NPCNECGKSFSRHSDLINHQKIHTGEKPYKCDACGKAFSTCTDLIEHQKIHAGEKPYRCV 614

Query: 570 LCTKEFSRKGRLTEHMKLHLG 590
            C++ FS+   LT H ++H G
Sbjct: 615 QCSRSFSQLSELTIHEEVHCG 635

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|Q9HCG1|ZN160_HUMAN Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 PE=2 SV=3

 Score =  296 bits (757), Expect = 4e-79,   Method: Compositional matrix adjust.
 Identities = 204/529 (38%), Positives = 270/529 (51%), Gaps = 24/529 (4%)

Query: 86  YKCQESYKRGKLKKKLC-------QDIGYKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCD 137
           YKC E  K   ++  L         +  YKC  C K + +   L  H ++H G + YKC+
Sbjct: 285 YKCSECGKTFTVRSNLTIHQVIHTGEKPYKCHECGKVFRHNSYLATHRRIHTGEKPYKCN 344

Query: 138 LCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSK 195
            C K F     LT H  +H G K  KC  C K F+  S+L  H + H G K YKCN C K
Sbjct: 345 ECGKAFRGHSNLTTHQLIHTGEKPFKCNECGKLFTQNSHLISHWRIHTGEKPYKCNECGK 404

Query: 196 EFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSR 253
            FS +S L  H  +H  E  YKC+ C K +    YL  H ++H G K  KC  C K FS 
Sbjct: 405 AFSVRSSLAIHQTIHTGEKPYKCNECGKVFRYNSYLGRHRRVHTGEKPYKCNECGKAFSM 464

Query: 254 KRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNL 311
              L  H  +H G K  KCN CSK F+  S L  H ++H G   YKC+ C K F  + +L
Sbjct: 465 HSNLATHQVIHTGTKPFKCNECSKVFTQNSQLANHRRIHTGEKPYKCNECGKAFSVRSSL 524

Query: 312 TKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHM 369
           T H  +H G K  KC+ C K F+ KS+L  H  +H G K  KC+ C K F+    +  H 
Sbjct: 525 TTHQAIHSGEKPYKCIECGKSFTQKSHLRSHRGIHSGEKPYKCNECGKVFAQTSQLARHW 584

Query: 370 KLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHL 427
           ++H  E  YKC+ C + +S++  LT H  +H G K  KC  C K F     L  H ++H 
Sbjct: 585 RVHTGEKPYKCNDCGRAFSDRSSLTFHQAIHTGEKPYKCHECGKVFRHNSYLATHRRIHT 644

Query: 428 GIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK 485
           G K  KCN C K FS  S+L  H  +H G   YKCN C K F +  +L  H + H G K 
Sbjct: 645 GEKPYKCNECGKAFSMHSNLTTHKVIHTGEKPYKCNQCGKVFTQNSHLANHQRTHTGEKP 704

Query: 486 -KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCD 542
            +C+ C K FS + SLT H  +H G K  KC+ C K F+    +  H ++H G K  +C 
Sbjct: 705 YRCNECGKAFSVRSSLTTHQAIHTGKKPYKCNECGKVFTQNAHLANHRRIHTGEKPYRCT 764

Query: 543 LCSKEFSTKHTLTEHMKLHQG-IRYKCDLCTKEFSRKGRLTEHMKLHLG 590
            C K F  + +LT HM +H G  RYKC+ C K F +   L  H ++H G
Sbjct: 765 ECGKAFRVRSSLTTHMAIHTGEKRYKCNECGKVFRQSSNLASHHRMHTG 813

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q14591|ZN271_HUMAN Zinc finger protein 271 OS=Homo sapiens GN=ZNF271 PE=2 SV=4

 Score =  290 bits (741), Expect = 3e-77,   Method: Compositional matrix adjust.
 Identities = 205/520 (39%), Positives = 278/520 (53%), Gaps = 18/520 (3%)

Query: 88  CQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCK 146
           C++ Y+  K  K   +   Y C+ C K +S+   L +H ++H G + YKCD C K FS  
Sbjct: 100 CEKPYEWDKCGKATGEK-PYSCNWCIKSFSWSSDLIKHQRVHTGEKPYKCDECGKAFSQS 158

Query: 147 RYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLT 204
             L  H ++H G K  +C  CSK FS +S L +H + H G K Y CN C+K FS  S + 
Sbjct: 159 SDLIIHQRIHIGEKPYQCRHCSKSFSQRSDLVKHQRIHTGEKPYTCNQCNKHFSQSSDVI 218

Query: 205 EHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMK 262
           +H ++H  E  YKCD+C K +S    L  H ++H G K   C  CSK FS+   L +H +
Sbjct: 219 KHQRIHTGEKPYKCDVCGKAFSQSSDLILHQRIHTGEKPYPCNQCSKSFSQNSDLIKHRR 278

Query: 263 LHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQG 320
           +H G K  KCN C K F+  S L  H ++H G   Y CD CSK F R  +L  H ++H G
Sbjct: 279 IHTGEKPYKCNECGKAFNQSSVLILHQRIHTGEKPYPCDQCSKTFSRLSDLINHQRIHTG 338

Query: 321 MKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITY 377
            K   C  C+K FS +S L +H ++H G K  +CD C K FS    +  H ++H  E  Y
Sbjct: 339 EKPYPCNQCNKMFSRRSDLVKHHRIHTGEKPYECDECGKTFSQSSNLILHQRIHTGEKPY 398

Query: 378 KCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNL 435
            C  C K +S +  L +H ++H G K   C  C K FS+   LT+H ++H G K   CN 
Sbjct: 399 ACSDCTKSFSRRSDLVKHQRIHTGEKPYACNQCDKSFSQSSDLTKHQRVHSGEKPYHCNS 458

Query: 436 CSKEFSCKSHLKEHMQVHQGITYK-CNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKE 493
           C K FS  S L  H ++H G  Y  C  CSK F +  +L KH ++H G K  KC  C K 
Sbjct: 459 CEKAFSQSSDLILHQRIHTGEKYYLCTQCSKSFSQISDLIKHQRIHTGEKPYKCSECRKA 518

Query: 494 FSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTK 551
           FS   +LT H ++H G K   CD C K FS +  +  H K+H G K  KCD C K FST 
Sbjct: 519 FSQCSALTLHQRIHTGKKPNPCDECGKSFSRRSDLINHQKIHTGEKPYKCDACGKAFSTC 578

Query: 552 HTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
             L EH K H   + Y+C  C++  S+   LT H ++H G
Sbjct: 579 TDLIEHQKTHAEEKPYQCVQCSRSCSQLSELTIHEEVHCG 618

May be involved in transcriptional regulation. Plays a role in the EBV-mediated transformation process.

Homo sapiens (taxid: 9606)

>sp|P10076|ZFP26_MOUSE Zinc finger protein 26 OS=Mus musculus GN=Zfp26 PE=2 SV=2

 Score =  289 bits (739), Expect = 4e-77,   Method: Compositional matrix adjust.
 Identities = 183/529 (34%), Positives = 272/529 (51%), Gaps = 45/529 (8%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           Y+C  C K +     LTEHM+ H G + Y+CD C   F+   YLT H++ H G K  +C 
Sbjct: 302 YECKECGKTFIQPSRLTEHMRSHTGEKPYQCDQCGNAFASSSYLTTHLRTHTGEKPFECN 361

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
           +C K F+  SYL  H++ H G K Y+C +C K FS +S+LT H++ H  E  Y C  C K
Sbjct: 362 ICGKAFTRSSYLLGHIRTHTGEKPYECKVCGKAFSGRSWLTIHLRKHTGERPYPCTECEK 421

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            +++   LTEH+K H G K  +C +C++ F     L  H ++H GIK  KCN C K F+ 
Sbjct: 422 AFTSFAQLTEHIKTHTGEKPFRCKVCARTFRNSSCLKTHFRIHTGIKPYKCNYCGKAFTA 481

Query: 281 KSHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
           +S L +H+ +H G   Y+C  C K F     L +H+++H G K  +C  C K  +  S L
Sbjct: 482 RSGLTKHVLIHNGEKPYECKECGKAFSTSSGLVEHIRIHTGEKPFECYQCGKALAHSSSL 541

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
             H++ H G K  +C+ C K F+   Y+  HM+ H  E  Y+C  C K +  +  LT+H+
Sbjct: 542 VGHLRTHTGEKPFECNQCDKTFTRSSYLRIHMRTHTGEKPYECKECGKTFPERSCLTKHI 601

Query: 397 KLHQGIKN-----------------------------KCVLCSKEFSRKRRLTEHMKLHL 427
           + H G +                              +C +C+K F     L  H ++H 
Sbjct: 602 RTHTGERPYECKECGKGFISFAQLTVHIKTHSSERPFQCKVCTKSFRNSSSLETHFRIHT 661

Query: 428 GIKN-KCNLCSKEFSCKSHLKEHMQVHQGI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKK 485
           G+K  KC+ C K F+ +S L  H++ H G  +Y C  C K F     L  H++ H+G K 
Sbjct: 662 GVKPYKCSYCGKAFTARSGLTIHLRNHTGEKSYACQECGKAFSTSSGLIAHIRSHKGEKP 721

Query: 486 -KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCD 542
            +CD C K F++   L  H+K+H G K  +C +C K F+C   +  HM+ H G K  +C 
Sbjct: 722 FECDHCGKAFASSSYLNVHLKIHTGEKPFQCTVCGKTFTCSSYLPVHMRTHTGEKPFQCI 781

Query: 543 LCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
           +C K F     L  HM++H G + Y C  C K F+    L +H++ H G
Sbjct: 782 ICGKSFLWSSYLRVHMRIHTGEKPYVCQYCGKAFTEHSGLNKHLRKHTG 830

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|Q96IR2|ZN845_HUMAN Zinc finger protein 845 OS=Homo sapiens GN=ZNF845 PE=2 SV=3

 Score =  289 bits (739), Expect = 5e-77,   Method: Compositional matrix adjust.
 Identities = 215/529 (40%), Positives = 276/529 (52%), Gaps = 24/529 (4%)

Query: 86  YKCQESYKRGKLKKKL-------CQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCD 137
           YKC+E  K    K  L         +  YKC+ CS+ +S K +LT H +LH G + YKC+
Sbjct: 355 YKCEECDKAFSFKSNLERHRKIHTGEKPYKCNECSRTFSRKSSLTRHRRLHTGEKPYKCN 414

Query: 138 LCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSK 195
            C K FS    L  H ++H G K  KC  C + FS KS L  H + H G K YKCN C K
Sbjct: 415 DCGKTFSQMSSLVYHRRLHTGEKPYKCEECDEAFSFKSNLERHRRIHTGEKPYKCNDCGK 474

Query: 196 EFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSR 253
            FS  S L  H +LH  E  YKC+ C + +S K  L  H  +H G K  KC  C K FSR
Sbjct: 475 TFSQTSSLVYHRRLHTGEKPYKCEECDEAFSFKSNLERHRIIHTGEKLYKCNECGKTFSR 534

Query: 254 KRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ-GITYKCDLCSKEFYRKQNL 311
           K  LT H +LH G K  +CN C K F  +S L  H  +H  G  YKC+ C + F     +
Sbjct: 535 KSSLTRHCRLHTGEKPYQCNECGKAFRGQSALIYHQAIHGIGKLYKCNDCHQVFSNATTI 594

Query: 312 TKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHM 369
             H ++H   ++ KC  C K F  +SYL  H + H G K  KC+ C + FS K  +  H 
Sbjct: 595 ANHWRIHNEERSYKCNRCGKFFRHRSYLAVHWRTHSGEKPYKCEECDEAFSFKSNLQRHR 654

Query: 370 KLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHL 427
           ++H  E  Y+C+ C K +S K YLT H +LH G K  KC  C K F R   L  H  +H 
Sbjct: 655 RIHTGEKPYRCNECGKTFSRKSYLTCHRRLHTGEKPYKCNECGKTFGRNSALIIHKAIHT 714

Query: 428 GIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK 485
           G K  KCN C K FS KS L  H+++H G   YKC  C K F RK +L KH ++H G K 
Sbjct: 715 GEKPYKCNECGKAFSQKSSLTCHLRLHTGEKPYKCEECDKVFSRKSSLEKHRRIHTGEKP 774

Query: 486 -KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCD 542
            KC +C K F     L +H ++H G K  KC+ C K F    ++  H  +H G K  KC+
Sbjct: 775 YKCKVCDKAFGRDSHLAQHTRIHTGEKPYKCNECGKNFRHNSALVIHKAIHSGEKPYKCN 834

Query: 543 LCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
            C K F     L  H  +H G + YKC  C K F+RK  L+ H +LH G
Sbjct: 835 ECGKTFRHNSALEIHKAIHTGEKPYKCSECGKVFNRKANLSRHHRLHTG 883

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q96SE7|ZN347_HUMAN Zinc finger protein 347 OS=Homo sapiens GN=ZNF347 PE=1 SV=2

 Score =  288 bits (737), Expect = 8e-77,   Method: Compositional matrix adjust.
 Identities = 195/501 (38%), Positives = 260/501 (51%), Gaps = 17/501 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG-IRYKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           YKC  C K +  +  LT H  +H G  RYKC+ C K FS    L++H K+H G K  KC 
Sbjct: 289 YKCYECGKAFRTRSNLTTHQVIHTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPYKCN 348

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
            C K F+  S+L  H   H G K YKCN C K F ++S L  H   H  E  YKC+ C K
Sbjct: 349 ECGKVFTQNSHLVRHRGIHTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPYKCNECGK 408

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            ++   +LT H ++H G K  KC  C K F  +  L  H+ +H G K  KC+ C K F  
Sbjct: 409 VFTQNSHLTNHWRIHTGEKPYKCNECGKAFGVRSSLAIHLVIHTGEKPYKCHECGKVFRR 468

Query: 281 KSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
            SHL  H  +H G   YKC+ C K F    NLT H  +H G K  KC  C K F+  S+L
Sbjct: 469 NSHLARHQLIHTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPYKCNECGKVFTQNSHL 528

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
             H ++H G+K   C+ C K FS    +T H  +H  E  YKC+ C K ++   +L  H 
Sbjct: 529 ANHQRIHTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPYKCNECGKVFTQNSHLARHR 588

Query: 397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
            +H G K  KC  C K F     L+ H ++H G K  K N   K FS  S+L  H  +H 
Sbjct: 589 GIHTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPYKYNEYGKAFSEHSNLTTHQVIHT 648

Query: 455 G-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
           G   YKCN C K F +  +L +H ++H G K  +C+ C K FS    L  H ++H G K 
Sbjct: 649 GEKPYKCNECGKVFTQNSHLARHRRVHTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKP 708

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
            +C+ C K FS + S+T H  +H G K  KC+ C K F+    L  H  +H G + YKC+
Sbjct: 709 YECNQCGKAFSVRSSLTTHQAIHTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPYKCN 768

Query: 570 LCTKEFSRKGRLTEHMKLHLG 590
            C K FS+  +L  H ++H G
Sbjct: 769 ECGKAFSQTSKLARHQRIHTG 789

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q99676|ZN184_HUMAN Zinc finger protein 184 OS=Homo sapiens GN=ZNF184 PE=1 SV=4

 Score =  286 bits (731), Expect = 4e-76,   Method: Compositional matrix adjust.
 Identities = 192/502 (38%), Positives = 264/502 (52%), Gaps = 17/502 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           YKC+ C K +S    L  H ++H G + YKCD C K F     LT+H ++H G K  KC 
Sbjct: 250 YKCNECEKAFSRSENLINHQRIHTGDKPYKCDQCGKGFIEGPSLTQHQRIHTGEKPYKCD 309

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
            C K FS +++L +H + H G K Y CN C K FS + +  EH K+H  E  +KCD C K
Sbjct: 310 ECGKAFSQRTHLVQHQRIHTGEKPYTCNECGKAFSQRGHFMEHQKIHTGEKPFKCDECDK 369

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            ++   +LT+H K+H G K  KC  C K F+       H  +H G K  +CN C K FS 
Sbjct: 370 TFTRSTHLTQHQKIHTGEKTYKCNECGKAFNGPSTFIRHHMIHTGEKPYECNECGKAFSQ 429

Query: 281 KSHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
            S+L +H + H G   Y C  C K F    +L +H+K+H G K  KC  C K FS  S L
Sbjct: 430 HSNLTQHQKTHTGEKPYDCAECGKSFSYWSSLAQHLKIHTGEKPYKCNECGKAFSYCSSL 489

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHL 396
           T+H ++H   K  +C  C K FS    + +H K H QE  Y+C  C K +     L +H 
Sbjct: 490 TQHRRIHTREKPFECSECGKAFSYLSNLNQHQKTHTQEKAYECKECGKAFIRSSSLAKHE 549

Query: 397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
           ++H G K  +C  C K FS    L +H K+H G +  KCN C + F+   HL +H ++H 
Sbjct: 550 RIHTGEKPYQCHECGKTFSYGSSLIQHRKIHTGERPYKCNECGRAFNQNIHLTQHKRIHT 609

Query: 455 GI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
           G   Y+C  C K F    +L +H K H   K  +C+ C K FS    LT+H ++H G K 
Sbjct: 610 GAKPYECAECGKAFRHCSSLAQHQKTHTEEKPYQCNKCEKTFSQSSHLTQHQRIHTGEKP 669

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
            KC+ C K FS    +TEH   H G K   C+ C K FS    L +H ++H G + + C+
Sbjct: 670 YKCNECDKAFSRSTHLTEHQNTHTGEKPYNCNECRKTFSQSTYLIQHQRIHSGEKPFGCN 729

Query: 570 LCTKEFSRKGRLTEHMKLHLGI 591
            C K F  +  L +H +LH GI
Sbjct: 730 DCGKSFRYRSALNKHQRLHPGI 751

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	591
326673953	765	PREDICTED: zinc finger protein 850-like	0.988	0.763	0.405	1e-95
358417007	925	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.818	0.523	0.421	3e-92
440905011	790	Zinc finger protein 26, partial [Bos gru	0.790	0.591	0.446	1e-90
328711363	643	PREDICTED: zinc finger protein 845-like	0.851	0.782	0.396	1e-89
296477336	699	TPA: zinc finger protein 107 [Bos taurus	0.815	0.689	0.420	3e-88
358417009	1448	PREDICTED: LOW QUALITY PROTEIN: zinc fin	0.818	0.334	0.405	4e-88
328706819	818	PREDICTED: zinc finger protein 91-like [	0.818	0.591	0.404	2e-87
242008211	1219	zinc finger protein, putative [Pediculus	0.824	0.399	0.387	5e-87
334329186	814	PREDICTED: zinc finger protein 850-like	0.818	0.594	0.401	4e-86
328705603	735	PREDICTED: zinc finger protein 62 homolo	0.818	0.658	0.399	3e-85

>gi|326673953|ref|XP_001921672.3| PREDICTED: zinc finger protein 850-like [Danio rerio]

 Score =  357 bits (915), Expect = 1e-95,   Method: Compositional matrix adjust.
 Identities = 251/619 (40%), Positives = 335/619 (54%), Gaps = 35/619 (5%)

Query: 1   MELNVEESKDHVGLSPPFYDPSRVIKHEPLDIPYEVMVKEESNESDRINIEE--NDWNDA 58
           M    EES+D + +   F      +KHE  +  + V  ++   ++D + ++E   D N  
Sbjct: 1   MAFIKEESED-IKIEETF-----TVKHEETEEAFRVKHEDPEEQTDLMPLKEESQDPNKR 54

Query: 59  VTRDCLEFFKSCPKVEVKSDHERRSIN------YKCQESYKRGK-LKKKLCQDIG---YK 108
             +D  E        + K+  ER +        ++C +S+ R +   K +    G   Y 
Sbjct: 55  EQKDQNEEISGVKSEQTKTASERPACKTEPNTCHQCGKSFTRKQSFTKHMRIHTGERPYT 114

Query: 109 CDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLC 166
           C  C K ++ KH LTEHMK+H G R + C  C K F+ K  LTEHM+VH G K   C  C
Sbjct: 115 CQQCGKSFTQKHVLTEHMKIHTGERPHTCQQCGKSFTQKHILTEHMRVHTGEKPYTCKQC 174

Query: 167 SKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEY 224
            K F+ K  LTEHM+ H G K Y CN C K F+ K  LTEHM++H  E  Y C  C K +
Sbjct: 175 GKGFTQKHMLTEHMRIHTGEKPYTCNHCEKGFTCKRNLTEHMRVHTGERPYPCQQCGKSF 234

Query: 225 SNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKS 282
           + K  LT+HL++H G K   C  C   F+ KR LTEHMK+H G +   C+LC K F+ K 
Sbjct: 235 TQKHKLTDHLRVHTGEKPFTCQQCEMSFTCKRYLTEHMKVHTGERPYTCHLCGKSFTWKR 294

Query: 283 HLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTE 340
           +  EHM++H G   Y C  C K F  KQ L  HM VH   K N C  C K F+ K  L E
Sbjct: 295 YHTEHMKIHSGEKPYTCQQCGKSFICKQKLLNHMMVHTEEKPNACDQCGKSFTLKHILIE 354

Query: 341 HMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKL 398
           HM++H G K   C  C K F CKRY TEHMK+H  E  Y C LC K ++ K Y TEH+++
Sbjct: 355 HMRVHTGEKPFTCQQCGKSFICKRYRTEHMKVHSGEKPYTCQLCGKSFTWKRYHTEHMRI 414

Query: 399 HQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGI 456
           H G K   C  C K F  K+ L +HMK+H G K + C+ C K F+CK +L+ HM  H G 
Sbjct: 415 HTGEKPYTCQQCGKSFICKQNLVKHMKVHSGEKPHTCDQCGKSFTCKQNLQNHMTFHTGG 474

Query: 457 T-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-K 513
             Y C  C K F R+Q LT+H ++H G K   C  C K F+ + +L  HMK+H G K   
Sbjct: 475 NLYTCQHCGKSFTREQRLTEHTRIHTGEKPYTCQQCGKSFTGEQNLKNHMKIHTGEKMYT 534

Query: 514 CDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIRYK-CDLC 571
           C  C K F+ K+++TEHMK+H G K   C  C K F  K TL EH ++H G +   C  C
Sbjct: 535 CKQCGKSFTWKQNLTEHMKIHTGEKPYTCQECGKSFFWKQTLIEHTRIHTGEKPNTCCQC 594

Query: 572 TKEFSRKGRLTEHMKLHLG 590
            K F+ K  L +HM++H G
Sbjct: 595 GKSFTWKQNLIDHMRIHTG 613

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|358417007|ref|XP_002702019.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 91 [Bos taurus]

 Score =  345 bits (886), Expect = 3e-92,   Method: Compositional matrix adjust.
 Identities = 211/501 (42%), Positives = 281/501 (56%), Gaps = 17/501 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           YKCD+C K +S    L  H ++H G + YKCD+C K F    +L +H +VH G K  KC 
Sbjct: 392 YKCDVCGKAFSRTGNLAVHRRVHTGEKPYKCDICGKAFRVTSHLADHRRVHTGEKPYKCN 451

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
           +C K FS  + LT H + H G K YKC++C K F+  + L  H ++H  E  YKC++C +
Sbjct: 452 VCDKAFSRAANLTVHWRIHTGEKPYKCDVCGKAFNHTTRLQLHQRIHTGEKPYKCNVCER 511

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            +S+   L  H ++H G K  KC +C K FS    LT H +LH G K  KC++C K FS 
Sbjct: 512 AFSHTSRLELHQRIHTGEKPYKCNVCDKAFSHSSNLTVHRRLHAGEKPYKCDICGKGFSV 571

Query: 281 KSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
            S L  H +VH G   YKCD C K F +   L  H K+H G K+ KC +C K FS    L
Sbjct: 572 SSSLAVHQRVHTGEKPYKCDTCGKAFNQTAKLGLHQKIHTGEKSYKCDVCGKAFSRTGNL 631

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
           T H ++H G K  KCD+C K F     +  H ++H  E  YKCD+C K +S    L  H 
Sbjct: 632 TVHRRVHTGEKPYKCDMCGKAFRVSSNLAVHQRVHTGEKPYKCDVCGKAFSQATGLAVHQ 691

Query: 397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
           ++H G K  KC +C K FS+   L  H ++H G K  KC++C K FS  + L+ H ++H 
Sbjct: 692 RVHTGEKPYKCDMCGKTFSQAAGLAVHQRIHTGEKPXKCDICGKAFSHTTRLELHQRIHT 751

Query: 455 G-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
           G   YKCN+C K F    NLT H +LH G K  KCD+C K F    +L  H  +H G K 
Sbjct: 752 GEKPYKCNVCDKAFSHTANLTVHRRLHTGEKPYKCDICGKGFRVSSNLGVHRSVHTGEKP 811

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
            KCD+C K FS   ++  H ++H G K  KCD+C K FS    L  H ++H G + YKCD
Sbjct: 812 YKCDVCGKAFSHTGNLAVHRRVHTGEKPYKCDVCGKAFSRTGNLAVHRRIHTGEKPYKCD 871

Query: 570 LCTKEFSRKGRLTEHMKLHLG 590
           +C K FSR G L  H +LH G
Sbjct: 872 VCGKAFSRTGNLAVHRRLHTG 892

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|440905011|gb|ELR55460.1| Zinc finger protein 26, partial [Bos grunniens mutus]

 Score =  340 bits (873), Expect = 1e-90,   Method: Compositional matrix adjust.
 Identities = 216/484 (44%), Positives = 268/484 (55%), Gaps = 17/484 (3%)

Query: 124 EHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMK 181
           +H+K H   + ++CD C K F    YL  H+++H G+K  KC  C K F S SYL  H +
Sbjct: 222 QHIKTHTVEKPFQCDTCGKAFGSSSYLRIHIRIHTGIKPYKCKRCGKAFVSSSYLQVHSR 281

Query: 182 RHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLHQG 239
            H GIK YKC  C K+FS  S LT HMK H ++  YKC +C K +     LT H K H G
Sbjct: 282 IHTGIKPYKCKECGKDFSQSSNLTGHMKTHTRDQPYKCKVCGKHFHRSSDLTGHTKTHTG 341

Query: 240 IK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITY 296
            +  KC  C K F     L  H ++H GIK  KC  C K F+  S L EHM  H G   +
Sbjct: 342 EQLYKCKECGKAFGSSSHLRVHSQIHTGIKIYKCQECGKTFTGSSRLIEHMNTHTGEKPF 401

Query: 297 KCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDL 354
           KCD+C K F +   LTKHMK+H G K  KC +C   F+  SYLT+HM+ H G K  KCD 
Sbjct: 402 KCDMCGKTFTQSSCLTKHMKIHTGEKPLKCDICGTTFTQTSYLTQHMRTHTGEKPFKCDK 461

Query: 355 CSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKE 412
           C K F+   Y++ H + H  E  +KCD C K +     L++H K H G K  KC  C K 
Sbjct: 462 CGKAFAAYSYLSNHFRTHTGEKPFKCDTCGKTFVQSSGLSQHKKTHTGEKPFKCDTCGKT 521

Query: 413 FSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRK 470
           FS+   L+ HM+ H G K  KC+ C K F   S L+ H+Q H G  T KC  C K F R 
Sbjct: 522 FSQSSYLSRHMRTHTGEKPYKCDTCGKGFGFSSILRRHLQSHTGEKTAKCEKCGKTFTRA 581

Query: 471 QNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVT 528
             LT+HMK H G K  KCD C K F+    LT+H + H G K  KCD C K F+    + 
Sbjct: 582 SGLTQHMKTHTGEKPYKCDKCGKAFADSSCLTKHFRTHTGEKPFKCDKCGKSFAVSSRLI 641

Query: 529 EHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMK 586
           EHMK H G K  KCD C K F+    LTEHMK H G + +KCD C K F+R   LT HMK
Sbjct: 642 EHMKTHTGEKPFKCDTCGKTFTRSSGLTEHMKTHTGEKPFKCDTCGKTFTRSSGLTRHMK 701

Query: 587 LHLG 590
           +H G
Sbjct: 702 IHTG 705

Source: Bos grunniens mutus

Species: Bos grunniens

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328711363|ref|XP_001946669.2| PREDICTED: zinc finger protein 845-like [Acyrthosiphon pisum]

 Score =  337 bits (864), Expect = 1e-89,   Method: Compositional matrix adjust.
 Identities = 208/524 (39%), Positives = 275/524 (52%), Gaps = 21/524 (4%)

Query: 88  CQESY-KRGKLKKKLCQDIG---YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKE 142
           C +S+ +RG L+  L    G   Y CD+C K +    TLT+H + H G + Y CD+C K 
Sbjct: 50  CDKSFSQRGTLEYHLRTHTGEKPYPCDVCEKTFGSSSTLTKHRRTHTGEKPYPCDVCDKT 109

Query: 143 FSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSK 200
           F     LTEH + H G K   C +C K F S   LT+H + H G K Y C++C K F S 
Sbjct: 110 FGSSSTLTEHRRTHTGEKPYSCDVCDKTFGSSGTLTKHRRTHTGEKPYPCDVCDKTFGSS 169

Query: 201 SYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLT 258
           S LTEH + H  E  Y CD+C K + +   LTEH + H G K   C +C K F     LT
Sbjct: 170 STLTEHRRTHTGEKPYPCDVCDKTFGSSSNLTEHRRTHTGEKPYPCDVCDKTFGSSSNLT 229

Query: 259 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMK 316
           EH + H G K   C++C K F   S L +H + H G   Y CD+C K F    NLTKH +
Sbjct: 230 EHRRTHTGEKPYPCDVCDKTFGSSSTLTKHRRTHTGEKPYSCDVCDKTFGSSSNLTKHRR 289

Query: 317 VHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ- 373
            H G K   C +C K F S S LT+H + H G K   CD+C K F     +TEH + H  
Sbjct: 290 THTGEKPYSCDVCDKTFGSSSNLTKHRRTHTGEKPYPCDVCDKTFGSSNTLTEHRRTHTG 349

Query: 374 EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN- 431
           E  Y CD+C K + +   LT+H + H G K   C +C K FS++  L  H++ H G K  
Sbjct: 350 EKPYPCDVCDKTFGSSGTLTKHRRTHTGEKPYPCDVCDKSFSQRGTLEYHLRTHTGNKPY 409

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDL 489
            C++C K FS +  L+ H++ H G   Y C++C K F    NLTKH + H G K   C +
Sbjct: 410 SCDVCDKSFSQRGTLEYHLRTHTGEKPYPCDVCEKTFGSSSNLTKHRRTHTGEKPYPCSV 469

Query: 490 CSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKE 547
           C+K F+   SLT H++ H   K  KCD+C K F     +  H   H G K   CD+C K 
Sbjct: 470 CNKSFTRNYSLTIHLRTHTSEKPCKCDVCDKSFPQSGHLMTHRPTHTGEKPYACDVCDKS 529

Query: 548 FSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
           FS    L  H + H G + Y CD+C K FS+ G L  H + H G
Sbjct: 530 FSRSGNLITHQRTHTGEKPYACDVCDKSFSQSGNLITHRRTHTG 573

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|296477336|tpg|DAA19451.1| TPA: zinc finger protein 107 [Bos taurus]

 Score =  332 bits (852), Expect = 3e-88,   Method: Compositional matrix adjust.
 Identities = 210/499 (42%), Positives = 282/499 (56%), Gaps = 17/499 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           YKC++C + +S+  +L+ H +LH G++ YKCD+C + FS    L  H  +H G K  KC 
Sbjct: 194 YKCNVCERAFSHTSSLSVHRRLHTGVKPYKCDICGRAFSQTASLALHRSIHTGEKPYKCD 253

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
           +C K F+  + L  H + H G K YKC +C K FS  + L  H ++H  E  YKC++C K
Sbjct: 254 VCGKAFNQTAKLRLHRRIHTGEKPYKCCVCGKAFSHTTGLELHQRIHTGEKPYKCNVCDK 313

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            +S+   LT H +LH G K  KC +C K FS    L  H ++H G K  KC+ C K F+ 
Sbjct: 314 AFSHSSNLTVHRRLHAGEKPYKCDICGKGFSVSSSLAVHQRVHTGEKPYKCDTCGKAFNQ 373

Query: 281 KSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
            + L  H ++H G  +YKCD+C K F R  NLT H +VH G K  KC +C K F   S L
Sbjct: 374 TAKLGLHQKIHTGEKSYKCDVCGKAFSRTGNLTVHRRVHTGEKPYKCDMCGKAFRVSSNL 433

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
             H ++H G K  KCD+C K FS    +  H ++H  E  YKCD+C K +++   L  H 
Sbjct: 434 AVHQRVHTGEKPYKCDVCGKAFSQATGLAVHQRIHTGEKPYKCDVCGKAFNHTTRLQLHQ 493

Query: 397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
           ++H G K  KC +C K F     L+ H KLH G K  KC++C K F   S+L  H  VH 
Sbjct: 494 RIHTGEKPYKCNVCDKAFISAANLSVHRKLHTGEKPYKCDICGKGFRVSSNLGIHRSVHT 553

Query: 455 G-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
           G   YKC++C K F    NL  H ++H G K  KCD+C K FS   +L  H +LH G K 
Sbjct: 554 GEKPYKCDVCGKAFSHTGNLAVHRRVHTGEKPYKCDVCGKAFSCTGNLAVHRRLHTGEKP 613

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
            KCD+C K FS   ++T H +LH G K  KCD+C K FS    L  H  +H G + YKCD
Sbjct: 614 YKCDVCGKAFSHTANLTVHQRLHTGEKAYKCDICGKGFSVSSNLGVHRSVHTGEKPYKCD 673

Query: 570 LCTKEFSRKGRLTEHMKLH 588
           +C KEFS  G LT H ++H
Sbjct: 674 VCGKEFSYTGNLTVHQRVH 692

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|358417009|ref|XP_002702020.2| PREDICTED: LOW QUALITY PROTEIN: zinc finger protein 91, partial [Bos taurus]

 Score =  332 bits (850), Expect = 4e-88,   Method: Compositional matrix adjust.
 Identities = 203/501 (40%), Positives = 280/501 (55%), Gaps = 17/501 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           YKCD+C K +S    L  H ++H G + YKCD+C K F    +L +H +VH G K  KC 
Sbjct: 438 YKCDVCGKAFSRTGNLAVHRRVHTGEKPYKCDICGKAFRVTSHLADHRRVHTGEKPYKCN 497

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
           +C K FS  + LT H + H G K YKC++C K F+  + L  H ++H  E  YKC++C +
Sbjct: 498 VCDKAFSRAANLTVHWRIHTGEKPYKCDVCGKAFNHTTRLQLHQRIHTGEKPYKCNVCER 557

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            +S+   L+ H +LH G+K  KC +C + FS+   L  H  +H G K  KC++C K F+ 
Sbjct: 558 AFSHTSSLSVHRRLHTGVKPYKCDICGRAFSQTASLALHRSIHTGEKPYKCDVCGKAFNQ 617

Query: 281 KSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
            + L+ H ++H G   YKC +C K F     L  H ++H G K  KC +C K FS  S L
Sbjct: 618 TAKLRLHRRIHTGEKPYKCCVCGKAFSHTTGLELHQRIHTGEKPYKCNVCDKAFSHSSNL 677

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
           T H +LH G K  KCD+C K FS    +  H ++H  E  YKCD C K ++    L  H 
Sbjct: 678 TVHRRLHAGEKPYKCDICGKGFSVSSSLAVHQRVHTGEKPYKCDTCGKAFNQTAKLGLHQ 737

Query: 397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
           K+H G K+ KC +C K FSR   LT H ++H G K  KC++C K F   S+L  H +VH 
Sbjct: 738 KIHTGEKSYKCDVCGKAFSRTGNLTVHRRVHTGEKPYKCDMCGKAFRVSSNLAVHQRVHT 797

Query: 455 G-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
           G   YKC++C K F +   L  H ++H G K  KCD+C K F+    L  H ++H G K 
Sbjct: 798 GEKPYKCDVCGKAFSQATGLAVHQRIHTGEKPYKCDVCGKAFNHTTRLQLHQRIHTGEKP 857

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
            KC++C K F    +++ H KLH G K  KCD+C K F     L  H  +H G + YKCD
Sbjct: 858 YKCNVCDKAFISAANLSVHRKLHTGEKPYKCDICGKGFRVSSNLGIHRSVHTGEKPYKCD 917

Query: 570 LCTKEFSRKGRLTEHMKLHLG 590
           +C K FS  G L  H ++H G
Sbjct: 918 VCGKAFSHTGNLAVHRRVHTG 938

Source: Bos taurus

Species: Bos taurus

Genus: Bos

Family: Bovidae

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328706819|ref|XP_003243211.1| PREDICTED: zinc finger protein 91-like [Acyrthosiphon pisum]

 Score =  330 bits (845), Expect = 2e-87,   Method: Compositional matrix adjust.
 Identities = 204/504 (40%), Positives = 274/504 (54%), Gaps = 20/504 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           Y CD+C K +S   +LT+H + H G + YKCD+C K FS    LT H + H G K   C 
Sbjct: 146 YACDVCEKSFSEIGSLTKHKRTHTGEKPYKCDVCEKSFSTSSNLTTHRRTHTGEKPYACD 205

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
           +C K FS+ + LT H + H G K + C++C K FS    L  H + H  E  Y CD+C K
Sbjct: 206 VCEKSFSASTDLTIHRRMHTGEKPFPCDVCEKSFSQSGNLIAHRRTHTGEKPYACDVCEK 265

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            +S   +LT H + H G K   C +C K FS    LT H ++H G K   C++C K FS 
Sbjct: 266 SFSESSHLTRHKRTHTGEKPYACDVCEKSFSTSTDLTIHRRMHTGEKPFPCDVCDKSFSK 325

Query: 281 KSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMK----NKCVLCSKEFSSK 335
             +L  H ++H G   Y CD+C K F    +LTKH + H G K    N+C +C K FS  
Sbjct: 326 SGNLIAHRRMHTGEKPYACDVCEKSFTESGSLTKHRRTHTGEKPYKLNQCDVCDKSFSES 385

Query: 336 SYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLT 393
           + LT H ++H G K   CD+C K FS    +T H + H  E  + CD+C K +S    LT
Sbjct: 386 TNLTIHRRMHTGEKPFPCDVCEKSFSQSGNLTAHRRTHTGEKPFLCDVCDKSFSKSTNLT 445

Query: 394 EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQ 451
            H + H G K   C +C K FS    LT+H + H G K   C++C K FS  SHL +H +
Sbjct: 446 THRRTHTGEKPYACDVCEKSFSESGNLTKHKQTHTGEKPYACDVCEKSFSESSHLTKHKR 505

Query: 452 VHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQG 509
            H G   Y C++C K F +  NLTKH + H G K   CD+C K F T   LT H ++H G
Sbjct: 506 THTGEKPYACDVCEKSFSQSGNLTKHKRTHTGEKPYACDVCEKSFPTSTDLTIHRRMHTG 565

Query: 510 IKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-Y 566
            K   CD+C K FS    +T+H + H G K   CD+C K FS    LT H ++H G + +
Sbjct: 566 EKPYACDVCEKSFSQSSHLTKHKRTHTGEKPYACDVCEKSFSESSNLTIHRRMHTGEKPF 625

Query: 567 KCDLCTKEFSRKGRLTEHMKLHLG 590
            CD+C K FS+ G LT H ++H G
Sbjct: 626 PCDVCEKSFSKSGNLTVHQRMHTG 649

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242008211|ref|XP_002424904.1| zinc finger protein, putative [Pediculus humanus corporis] gi|212508484|gb|EEB12166.1| zinc finger protein, putative [Pediculus humanus corporis]

 Score =  328 bits (841), Expect = 5e-87,   Method: Compositional matrix adjust.
 Identities = 197/508 (38%), Positives = 283/508 (55%), Gaps = 21/508 (4%)

Query: 104  DIGYKCDLCSKEYSYKHTLTEHMKLHQG-IRYKCDLCSKEFSCKRYLTEHMKVHQG-MKN 161
            D  ++C++C K ++ K   T H+  H G   ++CD CSK F+ K +L  H++ H G   +
Sbjct: 628  DTPFRCEICGKAFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPH 687

Query: 162  KCVLCSKEFSSKSYLTEHMKRHQG-IKYKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDL 219
            +C  CSK F+ K +L  H+++H G   ++C  C K F+ K +L  H++ H  E  +KC  
Sbjct: 688  RCGYCSKSFTRKEHLINHVRQHTGETPFRCEYCPKAFTRKDHLVNHVRQHTGETPHKCQY 747

Query: 220  CLKEYSNKIYLTEHLKLHQG-IKNKCVLCSKEFSRKRRLTEHMKLHLG-IKNKCNLCSKE 277
            C KE++ K +LT H++ H G    +C  C K F+RK  L EH++ H G    KC  C KE
Sbjct: 748  CSKEFARKDHLTNHVRQHTGETPYRCTYCPKAFTRKDHLNEHVRQHTGETPYKCQYCPKE 807

Query: 278  FSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQG-MKNKCVLCSKEFSSK 335
            FS K HL  H++ H G T +KC  C KEF RK +LT H++ H G    KC  C K F+ K
Sbjct: 808  FSRKDHLNNHVRQHTGETPFKCQYCPKEFSRKDHLTNHIRQHTGETPFKCEYCPKCFTRK 867

Query: 336  SYLTEHMKLHQG-IKNKCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLT 393
             +LT H + H G    KC  C K FS K ++T+H + H  E  +KC  C KE+S K +LT
Sbjct: 868  DHLTNHTRQHTGETPFKCQYCPKAFSRKDHLTDHTRQHTGETPFKCAYCGKEFSRKDHLT 927

Query: 394  EHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLG-IKNKCNLCSKEFSCKSHLKEHMQ 451
             H + H G +  KC  C K F RK  LTEH++ H G   +KC  C+K F+ K HL  H++
Sbjct: 928  NHTRTHTGEQPFKCDFCPKAFGRKDHLTEHVRHHTGESPHKCQYCTKSFTRKEHLTNHVR 987

Query: 452  VHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQG 509
             H G   ++C+ C+K F RK++L  H+++H G    KC+ C K F+ K  LT H++ H G
Sbjct: 988  QHTGESPHRCHFCAKTFTRKEHLNNHVRIHTGDSPHKCEFCQKSFTRKEHLTNHLRQHSG 1047

Query: 510  IKKKC-DLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQ----- 562
                C ++CSK F+ K  +  HM+ H G +   C  C K F  K  L  H + H      
Sbjct: 1048 ETPHCCNVCSKPFTRKEHLINHMRCHTGERPFVCGECGKSFPLKGNLLFHQRSHNKGAAA 1107

Query: 563  GIRYKCDLCTKEFSRKGRLTEHMKLHLG 590
               ++CDLC K+F+ KG L  H + H G
Sbjct: 1108 DRPFRCDLCPKDFTCKGHLVSHRRAHTG 1135

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|334329186|ref|XP_001380391.2| PREDICTED: zinc finger protein 850-like [Monodelphis domestica]

 Score =  325 bits (834), Expect = 4e-86,   Method: Compositional matrix adjust.
 Identities = 201/501 (40%), Positives = 291/501 (58%), Gaps = 17/501 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           ++C  C K +S++  L EH ++H G + + C+ C K FS +  L  H ++H G K  KC 
Sbjct: 287 FECKECGKAFSHRGHLAEHQRIHTGEKPFACNECGKAFSHRTSLIYHHRIHTGEKPFKCN 346

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
            C K FS +  LTEH + H   K ++CN C K FS + +LT H   H  E  Y C+ C K
Sbjct: 347 ECGKAFSQRGNLTEHQRIHTREKPFECNECGKAFSHRGHLTTHQSTHSSEKPYLCNECGK 406

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            +S +  L EH ++H G K  +C  C K FSR+  L EH ++H G K  +CN C K FS 
Sbjct: 407 TFSQRGNLIEHQRIHTGEKPFECNECGKTFSRRAYLPEHQRIHTGEKPFQCNECGKAFSH 466

Query: 281 KSHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
           K  L EH ++H G   ++C+ C K F +   L +H K+H G K  +C  C   FS +  L
Sbjct: 467 KGSLTEHQRIHTGEKPFQCNECGKTFIKNARLAQHQKIHTGEKPFECTECGAMFSQEERL 526

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
            EH + H G K  +C  C K FS K Y+TEH ++H  E +++C  C K +S K YLTEH 
Sbjct: 527 IEHQRRHAGEKPFECKECGKFFSRKGYLTEHQRIHAGEKSFECKECGKFFSRKGYLTEHQ 586

Query: 397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
           ++H G K+ +C  C K FS+++ LT+H K+H G K  +CN C K F  + HL  H  +H 
Sbjct: 587 RIHAGDKSFECNECGKAFSQRKYLTQHQKIHTGEKPFECNECGKAFRQRGHLTAHQSIHT 646

Query: 455 GI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
               ++CN C K F ++ +LT+H ++H G K  +C+ C K FS + SLTEH ++H G K 
Sbjct: 647 AEKPFECNECGKAFRQRGSLTEHQRMHAGEKPFECNECGKAFSHRSSLTEHQRIHAGEKP 706

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
            +C+ C + F+ ++S   H +LH G K  +C+ C K FS    LT HM++H G + YKC+
Sbjct: 707 FECNTCGRAFTHRKSFIYHQRLHSGEKPFECNECGKAFSDNSYLTLHMRIHTGKKPYKCN 766

Query: 570 LCTKEFSRKGRLTEHMKLHLG 590
            C K FS++G LTEH ++H G
Sbjct: 767 HCGKAFSQRGNLTEHQRIHTG 787

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328705603|ref|XP_003242853.1| PREDICTED: zinc finger protein 62 homolog [Acyrthosiphon pisum]

 Score =  322 bits (825), Expect = 3e-85,   Method: Compositional matrix adjust.
 Identities = 200/501 (39%), Positives = 269/501 (53%), Gaps = 17/501 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           Y+CD+C K +S     T H ++H G + Y CD+C K FS    LT+H + H G K   C 
Sbjct: 6   YQCDVCDKSFSKSSNFTAHRRMHTGEKPYACDVCEKSFSESGKLTKHKRTHTGEKPYACD 65

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
           +C K FS  S LT+H + H G K Y C++C K FS    LT+H + H  E  Y CD+C K
Sbjct: 66  VCEKLFSESSQLTKHKRTHTGEKPYACDVCEKSFSESGSLTKHKRTHTGEKPYACDVCEK 125

Query: 223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
            +S    LT H ++H G K   C +C K FS+   L  H ++H G K   C++C K FS 
Sbjct: 126 SFSTSTDLTIHRRMHTGEKPFPCDVCEKSFSKSGNLIAHRRMHTGEKPYACDVCEKSFSE 185

Query: 281 KSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
              L +H + H G   Y CD+C K F    +LTKH + H G K   C +C K FS  + L
Sbjct: 186 SGKLTKHKRTHTGEKPYACDVCEKSFSEGGSLTKHKRTHTGEKPYACDVCDKSFSRSTDL 245

Query: 339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
           T H + H G K   CD+C K FS    +T+H + H  E  Y CD+C K +S    LT H 
Sbjct: 246 TIHRRTHTGEKPYACDVCEKSFSESGSLTKHKRTHTGEKPYACDVCEKSFSTSSNLTTHR 305

Query: 397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
           + H G K   C +C K FS    LT H + H G K   C++C K FS  + L  H + H 
Sbjct: 306 RTHTGEKPYACDVCEKSFSASSHLTRHKRTHTGEKPYACDVCEKSFSASTDLIAHRRTHT 365

Query: 455 G-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
           G   Y C++C K F    +LT+H + H G K   CD+C K FST   LT H ++H G K 
Sbjct: 366 GEKPYACDVCEKSFSESSHLTRHKRTHTGEKPYACDVCEKSFSTSTDLTIHRRMHTGEKP 425

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
             CD+C K FS   ++  H ++H G K   CD+C K F+   +LT+H + H G + Y CD
Sbjct: 426 FPCDVCDKSFSKSGNLIAHRRMHTGEKPYACDVCEKSFTESGSLTKHRRTHTGEKPYACD 485

Query: 570 LCTKEFSRKGRLTEHMKLHLG 590
           +C K FSR   LT H ++H G
Sbjct: 486 VCEKSFSRSTDLTIHRRMHTG 506

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	591
UNIPROTKB|F1MX34	1053	F1MX34 "Uncharacterized protei	0.818	0.459	0.408	1.2e-100
UNIPROTKB|G3X6V5	1158	G3X6V5 "Uncharacterized protei	0.815	0.416	0.404	2.5e-97
UNIPROTKB|F1N7M4	754	ZNF560 "Uncharacterized protei	0.761	0.596	0.426	4.7e-96
UNIPROTKB|G3N3R0	787	G3N3R0 "Uncharacterized protei	0.817	0.613	0.396	5.9e-96
UNIPROTKB|Q8N4W9	903	ZNF808 "Zinc finger protein 80	0.818	0.535	0.389	1.2e-95
UNIPROTKB|F1LVU4	738	LOC100365915 "Protein LOC10036	0.854	0.684	0.382	8.7e-95
UNIPROTKB|Q14591	655	ZNF271 "Zinc finger protein 27	0.922	0.832	0.381	3.8e-94
UNIPROTKB|F1N5B8	932	F1N5B8 "Uncharacterized protei	0.818	0.519	0.417	1.3e-93
UNIPROTKB|Q86XN6	746	ZNF761 "Zinc finger protein 76	0.874	0.693	0.406	1.6e-93
UNIPROTKB|F1MJ74	795	F1MJ74 "Uncharacterized protei	0.807	0.6	0.384	2.1e-93

UNIPROTKB|F1MX34 F1MX34 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 972 (347.2 bits), Expect = 1.2e-100, Sum P(2) = 1.2e-100
 Identities = 206/504 (40%), Positives = 281/504 (55%)

Query:   107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
             YKC++C + +S+  +L+ H +LH G++ YKCD+C + FS    L  H  +H G K  KC 
Sbjct:   538 YKCNVCERAFSHTSSLSVHRRLHTGVKPYKCDICGRAFSQTASLALHRSIHTGEKPYKCD 597

Query:   165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
             +C K F+  + L  H + H G K YKC +C K FS  + L  H ++H  E  YKC++C K
Sbjct:   598 VCGKAFNQTAKLRLHRRIHTGEKPYKCCVCGKAFSHTTGLELHQRIHTGEKPYKCNVCDK 657

Query:   223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
              +S+   LT H +LH G K  KC +C K FS    L  H ++H G K  KC+ C K F+ 
Sbjct:   658 AFSHSSNLTVHRRLHAGEKPYKCDICGKGFSVSSSLAVHQRVHTGEKPYKCDTCGKAFNQ 717

Query:   281 KSHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
              + L  H ++H G  +YKCD+C K F R  NLT H +VH G K  KC +C K F   S L
Sbjct:   718 TAKLGLHQKIHTGEKSYKCDVCGKAFSRTGNLTVHRRVHTGEKPYKCDMCGKAFRVSSNL 777

Query:   339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
               H ++H G K  KCD+C K FS    +  H ++H  E  YKCD+C K +++   L  H 
Sbjct:   778 AVHQRVHTGEKPYKCDVCGKAFSQATGLAVHQRIHTGEKPYKCDVCGKAFNHTTRLQLHQ 837

Query:   397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
             ++H G K  KC +C K F     L+ H KLH G K  KC++C K F   S+L  H  VH 
Sbjct:   838 RIHTGEKPYKCNVCDKAFISAANLSVHRKLHTGEKPYKCDICGKGFRVSSNLGIHRSVHT 897

Query:   455 GIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
             G   YKC++C K F    NL  H ++H G K  KCD+C K FS   +L  H +LH G K 
Sbjct:   898 GEKPYKCDVCGKAFSHTGNLAVHRRVHTGEKPYKCDVCGKAFSCTGNLAVHRRLHTGEKP 957

Query:   513 -KCDLCSKEFSCKRSVTEHMKLHL---GIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-Y 566
              KCD+C K FS   ++  H +LH    G K  KCD+C K F+    L  H ++H G + Y
Sbjct:   958 YKCDVCGKAFSRTGNLAVHRRLHTVDTGEKPYKCDMCGKAFNHTTRLELHQRIHTGEKPY 1017

Query:   567 KCDLCTKEFSRKGRLTEHMKLHLG 590
             KCD+C K F+   RL  H ++H G
Sbjct:  1018 KCDICGKAFNHTTRLELHQRIHTG 1041

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|G3X6V5 G3X6V5 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 967 (345.5 bits), Expect = 2.5e-97, P = 2.5e-97
 Identities = 202/499 (40%), Positives = 274/499 (54%)

Query:   107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
             YKC  CSK ++Y   LT+H ++H G + YKC  CSK F     L +H ++H G K  KC 
Sbjct:   660 YKCTECSKAFTYNSLLTQHRRIHTGEKPYKCTECSKAFIYNSLLIQHQRIHTGEKPFKCT 719

Query:   165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
              CSK F+  S L EH + H G K Y C  C+K F   S+LTEH ++H  E  YKC +C K
Sbjct:   720 ECSKAFTCNSDLIEHKRIHTGEKPYICKECNKAFRRSSFLTEHQRIHTGEKPYKCTVCGK 779

Query:   223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
              ++    L +H ++H   K  KC  CSK F+RK  L +H ++H G K  KC  CSK F+ 
Sbjct:   780 AFTYNSRLIQHQRIHAEEKPYKCTECSKAFTRKSVLIKHRQIHTGEKPYKCTECSKAFTY 839

Query:   281 KSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
              S L EH Q+H G   YKC  CSK F     L KH ++H G K  KC  CSK F   S L
Sbjct:   840 NSRLIEHQQIHAGEKPYKCTECSKAFTYNSLLIKHRRIHSGEKPYKCTECSKAFPCNSDL 899

Query:   339 TEHMKLHQGIKNK-CDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
              EH ++H G K   C  C+K F    ++T H ++H  E  YKC +C K ++    L +H 
Sbjct:   900 IEHQRIHTGEKPYICKECNKAFRRSSFLTRHQRIHAGEKPYKCTVCGKAFTYNSSLIQHQ 959

Query:   397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
             ++H G K+ KC  CSK F+    L +H + H G K  KC +C K F+  S L +H ++H 
Sbjct:   960 RIHTGEKHYKCTECSKAFTCNSLLIQHQQNHTGEKPYKCTVCGKAFTYNSRLIKHQRIHA 1019

Query:   455 GIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
             G   YKC  CSK F     L +H ++H G K  KC  CSK F+    L +H ++H G K 
Sbjct:  1020 GEKPYKCTECSKAFTYNSLLIQHRRIHTGEKPYKCTECSKTFTYNSRLIQHQRIHSGEKP 1079

Query:   513 -KCDLCSKEFSCKRSVTEHMKLHLGIKNK-CDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
              KC  CSK F+C  S+ +H ++H G K   C  C+K F     LT+H ++H G + YKC 
Sbjct:  1080 YKCTECSKAFTCNSSLIQHQRIHTGEKPYICKECNKAFHRSSFLTQHQRIHTGEKPYKCT 1139

Query:   570 LCTKEFSRKGRLTEHMKLH 588
              C K F+    L +H ++H
Sbjct:  1140 ECGKAFTYHSNLIQHKRIH 1158

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1N7M4 ZNF560 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 955 (341.2 bits), Expect = 4.7e-96, P = 4.7e-96
 Identities = 199/467 (42%), Positives = 255/467 (54%)

Query:   124 EHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMK 181
             +H+K H   + ++CD C K F    YL  H+++H G+K  KC  C K F S SYL  H +
Sbjct:   265 QHIKTHTVEKPFQCDTCGKAFGSSSYLRIHIRIHTGIKPYKCKRCGKAFVSSSYLQVHSR 324

Query:   182 RHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLHQG 239
              H GIK YKC  C K+FS  S LT HMK H ++  YKC +C K +     LT H K H G
Sbjct:   325 IHTGIKPYKCKECGKDFSQSSNLTGHMKTHTRDQPYKCKVCGKHFHRSSDLTGHTKTHTG 384

Query:   240 IK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-Y 296
              +  KC  C K F     L  H ++H GIK  KC  C K F+  S L EHM  H G   +
Sbjct:   385 EQLYKCKECGKAFGSSSHLRVHSQIHTGIKIYKCQECGKTFTGSSRLIEHMNTHTGEKPF 444

Query:   297 KCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDL 354
             KCD C K F +   LTKHMK+H G K  KC +C   F+  SYLT+HM+ H G K  KCD 
Sbjct:   445 KCDTCGKTFTQSSCLTKHMKIHTGEKPLKCDICGTTFTQTSYLTQHMRTHTGEKPFKCDK 504

Query:   355 CSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKE 412
             C K F+   Y++ H + H  E  +KCD C K +     L++H K H G K  KC  C K 
Sbjct:   505 CGKAFAAYSYLSNHFRTHTGEKPFKCDTCGKTFVQSSGLSQHKKTHTGEKPFKCDTCGKT 564

Query:   413 FSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGI-TYKCNLCSKEFYRK 470
             FS+   L+ HM+ H G K  KC+ C K F   S L+ H+Q H G  T KC  C K F R 
Sbjct:   565 FSQSSYLSRHMRTHTGEKPYKCDTCGKGFGFSSILRRHLQSHTGEKTAKCEKCGKTFTRA 624

Query:   471 QNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVT 528
               LT+HMK H G K  KCD C K F+    LT+H + H G K  KCD C K F+    +T
Sbjct:   625 SGLTQHMKTHTGEKPYKCDKCGKAFADSSCLTKHFRTHTGEKPFKCDKCGKSFAVSSRLT 684

Query:   529 EHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTK 573
             +H + H G K  +C+ C K F+T  ++T H + H G + Y C +C K
Sbjct:   685 KHFRTHTGEKPFECNTCGKTFTTSLSVTMHKRRHTGEKPYSCKICGK 731

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|G3N3R0 G3N3R0 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 954 (340.9 bits), Expect = 5.9e-96, P = 5.9e-96
 Identities = 198/500 (39%), Positives = 274/500 (54%)

Query:   108 KCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKNK-CVL 165
             KC +C K +S    L+ H ++H G + +KC  CS+ F+C   LT+H ++H G K+  C  
Sbjct:   145 KCKICEKVFSKSSNLSRHRRIHTGRKPFKCTECSRAFNCHSLLTQHQRIHAGEKSYICKE 204

Query:   166 CSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKE 223
             C+K F   S+L EH + H G K YKC +C K F+S S L EH ++H  E  YKC  C K 
Sbjct:   205 CNKAFHRSSFLIEHQRIHTGEKPYKCIVCGKAFTSNSDLIEHQRIHTLEKPYKCTECSKA 264

Query:   224 YSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCK 281
             ++    LTEH ++H G K  KC  CSK F+    L +H ++H G K  KC  CSK F+  
Sbjct:   265 FTYNSDLTEHQRIHTGEKPYKCTECSKAFTYNSLLIQHRRIHTGEKPYKCTECSKAFTYN 324

Query:   282 SHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLT 339
             S   EH ++H G   Y C  C+K F R   LT+H ++H G K  KC +C K F+ KS LT
Sbjct:   325 SDRIEHQRIHTGEKPYICKECNKAFRRSSFLTQHQRIHTGEKPYKCTVCGKAFTYKSLLT 384

Query:   340 EHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLK 397
             +H ++H G K  KC  CSK F+    + +H ++H  E  YKC  C K ++      EH +
Sbjct:   385 KHQRIHTGEKPYKCTECSKAFTYNSLLIQHRRIHTGEKPYKCTECSKAFTYNSDRIEHQR 444

Query:   398 LHQGIKNK-CVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 455
             +H G K   C  C+K F R   LT H ++H G K  KC +C K F+ KS L +H Q+H G
Sbjct:   445 IHTGEKPYICKECNKAFRRSSFLTRHQRIHTGEKPYKCTVCGKAFTYKSLLTKHQQIHTG 504

Query:   456 IT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKKK 513
                YKC  CSK F    +L +H ++H G K  KC  CSK F     L EH ++H G K  
Sbjct:   505 EKPYKCTECSKAFTYNSSLIQHQRIHAGEKPYKCTECSKAFICNSDLIEHQRIHTGEKPY 564

Query:   514 -CDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL 570
              C  C+K F     +T H ++H G +  KC +C K F+    L +H ++H G + YKC  
Sbjct:   565 ICKECNKAFRRSSFLTRHQRIHAGEQAYKCTVCGKAFTYSSNLIQHQRIHTGEKPYKCTE 624

Query:   571 CTKEFSRKGRLTEHMKLHLG 590
             C+K F     LT H ++H G
Sbjct:   625 CSKAFICYSDLTYHKRIHTG 644

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q8N4W9 ZNF808 "Zinc finger protein 808" [Homo sapiens (taxid:9606)]

 Score = 951 (339.8 bits), Expect = 1.2e-95, P = 1.2e-95
 Identities = 195/501 (38%), Positives = 273/501 (54%)

Query:   107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
             YKC+ C K ++ +  L+ H +LH G++ YKC +C K F+C  YL  H ++H G K  KC 
Sbjct:   343 YKCNECGKAFNQQSHLSRHQRLHTGVKPYKCKICEKAFACHSYLANHTRIHSGEKTYKCN 402

Query:   165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
              C K F+ +S L  H   H G K YKC  C K FS KS L  H ++H  E  YKC +C  
Sbjct:   403 ECGKAFNHQSSLARHHILHTGEKPYKCEECDKVFSQKSTLERHKRIHTGEKPYKCKVCDT 462

Query:   223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
              ++    L  H ++H G K  KC  C K FSR+  L  H +LH G K  KCN C   F  
Sbjct:   463 AFTCNSQLARHRRIHTGEKTYKCNECRKTFSRRSSLLCHRRLHSGEKPYKCNQCGNTFRH 522

Query:   281 KSHLKEHMQVHQ-GITYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
             ++ L  H ++H    +YKC +C+K F R   L  H ++H   K  KC  C K F+ +S+L
Sbjct:   523 RASLVYHRRLHTLEKSYKCTVCNKVFMRNSVLAVHTRIHTAKKPYKCNECGKAFNQQSHL 582

Query:   339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
             + H +LH G K  KC+ C K F  K  +  H ++H  E  Y+C +C   ++    L  H 
Sbjct:   583 SRHRRLHTGEKPYKCEACDKVFGQKSALESHKRIHTGEKPYRCQVCDTAFTWNSQLARHT 642

Query:   397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
             ++H G K  KC  C K FS K  L  H +LH G K+ KC +C K F C+S++ +H ++H 
Sbjct:   643 RIHTGEKTYKCNECGKTFSYKSSLVWHRRLHGGEKSYKCKVCDKAFVCRSYVAKHTRIHS 702

Query:   455 GIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
             G+  YKCN CSK F  + +L  H ++H G K  KC  CSK FS K +L  H +LH G K 
Sbjct:   703 GMKPYKCNECSKTFSNRSSLVCHRRIHSGEKPYKCSECSKTFSQKATLLCHRRLHSGEKP 762

Query:   513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
              KC+ C   F    S+  H +LH G K+ KC +C K F     L  H+++H   + YKC+
Sbjct:   763 YKCNDCGNTFRHWSSLVYHRRLHTGEKSYKCTVCDKAFVRNSYLARHIRIHTAEKPYKCN 822

Query:   570 LCTKEFSRKGRLTEHMKLHLG 590
              C K F+ +  L+ H ++H G
Sbjct:   823 ECGKAFNEQSHLSRHHRIHTG 843

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1LVU4 LOC100365915 "Protein LOC100365915" [Rattus norvegicus (taxid:10116)]

 Score = 943 (337.0 bits), Expect = 8.7e-95, P = 8.7e-95
 Identities = 202/528 (38%), Positives = 290/528 (54%)

Query:    80 ERRSINYKCQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDL 138
             ++ S N + ++S + G+ K+KLC     KC+ C K ++Y   L  H + H G + YKC+ 
Sbjct:   180 DQTSTNTRAKQSSRPGQ-KEKLC-----KCNECGKAFTYCSALIRHQRTHTGEKPYKCND 233

Query:   139 CSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKE 196
             C+K FS    L  H ++H G K  KC  C K F     LT+H + H G K YKC+ C K 
Sbjct:   234 CNKAFSRNENLINHQRIHTGDKPYKCDQCGKGFIEGPSLTQHQRIHTGEKPYKCDECGKA 293

Query:   197 FSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRK 254
             FS +++L +H ++H  E  Y C+ C K +S + +  EH K+H G K  KC  C K F+R 
Sbjct:   294 FSQRTHLVQHQRIHTGEKPYTCNECGKSFSQRGHFMEHQKIHTGEKPFKCEECEKTFTRS 353

Query:   255 RRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLT 312
               LT+H K+H G K  KCN C K F+  S    H  +H G   Y+C+ C K F +  NLT
Sbjct:   354 THLTQHQKIHTGEKTYKCNECGKAFNGPSTFIRHHMIHTGEKPYECNECGKAFSQHSNLT 413

Query:   313 KHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMK 370
             +H K H G K   C  C K FS  S L +H+K+H G K  KC  C K FS    +T+H +
Sbjct:   414 QHQKTHTGEKPYDCAECGKAFSYWSSLAQHLKIHTGEKPYKCSDCGKAFSYCSSLTQHRR 473

Query:   371 LH-QEITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLG 428
             +H +E  ++C  C K +S    L +H K H   K  +C  C K F R   L +H ++H G
Sbjct:   474 IHTREKPFECSECGKAFSYLSNLNQHQKTHTQEKAYECKECGKAFIRSSSLAKHERIHTG 533

Query:   429 IKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK- 485
              K  +C  C K FS  S L +H ++H G   YKCN C + F +K +LT+H ++H G+K  
Sbjct:   534 EKPYQCLECGKTFSYGSSLIQHKKIHTGERPYKCNECERAFNQKIHLTQHKRIHTGVKPY 593

Query:   486 KCDLCSKEFSTKCSLTEHMKLH-QGIKKKCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDL 543
              C  C K F    SL +H K H +G   +C+ C K FS K  +T+H ++H+G K  KC+ 
Sbjct:   594 ACPKCGKTFRHCSSLAQHQKTHTEGKHYQCNKCEKTFSQKSHLTQHQQVHMGEKPYKCND 653

Query:   544 CSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
             C + F+    LTEH  +H G + Y  ++C + F++   LT+H K+H G
Sbjct:   654 CDRCFTQSTHLTEHQSIHTGEKPYSSNVCPQTFNQNTYLTQHQKIHSG 701

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q14591 ZNF271 "Zinc finger protein 271" [Homo sapiens (taxid:9606)]

 Score = 937 (334.9 bits), Expect = 3.8e-94, P = 3.8e-94
 Identities = 217/569 (38%), Positives = 296/569 (52%)

Query:    41 ESNESDRINIEENDWNDAVTR--DCLEFFKSCPKVEVKSDHERRSINYKCQESYKRGKLK 98
             ++  S  + I E D N    R  +C E+ +S     V S    R     C++ Y+  K  
Sbjct:    55 KAKNSVNLGINEKDQNVFKRRPHNCDEYGQSF----VWSTSLFRHRKTHCEKPYEWDKCG 110

Query:    99 KKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQ 157
             K   +   Y C+ C K +S+   L +H ++H G + YKCD C K FS    L  H ++H 
Sbjct:   111 KATGEK-PYSCNWCIKSFSWSSDLIKHQRVHTGEKPYKCDECGKAFSQSSDLIIHQRIHI 169

Query:   158 GMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EIT 214
             G K  +C  CSK FS +S L +H + H G K Y CN C+K FS  S + +H ++H  E  
Sbjct:   170 GEKPYQCRHCSKSFSQRSDLVKHQRIHTGEKPYTCNQCNKHFSQSSDVIKHQRIHTGEKP 229

Query:   215 YKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN 272
             YKCD+C K +S    L  H ++H G K   C  CSK FS+   L +H ++H G K  KCN
Sbjct:   230 YKCDVCGKAFSQSSDLILHQRIHTGEKPYPCNQCSKSFSQNSDLIKHRRIHTGEKPYKCN 289

Query:   273 LCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSK 330
              C K F+  S L  H ++H G   Y CD CSK F R  +L  H ++H G K   C  C+K
Sbjct:   290 ECGKAFNQSSVLILHQRIHTGEKPYPCDQCSKTFSRLSDLINHQRIHTGEKPYPCNQCNK 349

Query:   331 EFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSN 388
              FS +S L +H ++H G K  +CD C K FS    +  H ++H  E  Y C  C K +S 
Sbjct:   350 MFSRRSDLVKHHRIHTGEKPYECDECGKTFSQSSNLILHQRIHTGEKPYACSDCTKSFSR 409

Query:   389 KIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHL 446
             +  L +H ++H G K   C  C K FS+   LT+H ++H G K   CN C K FS  S L
Sbjct:   410 RSDLVKHQRIHTGEKPYACNQCDKSFSQSSDLTKHQRVHSGEKPYHCNSCEKAFSQSSDL 469

Query:   447 KEHMQVHQGITYK-CNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHM 504
               H ++H G  Y  C  CSK F +  +L KH ++H G K  KC  C K FS   +LT H 
Sbjct:   470 ILHQRIHTGEKYYLCTQCSKSFSQISDLIKHQRIHTGEKPYKCSECRKAFSQCSALTLHQ 529

Query:   505 KLHQGIKKK-CDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQ 562
             ++H G K   CD C K FS +  +  H K+H G K  KCD C K FST   L EH K H 
Sbjct:   530 RIHTGKKPNPCDECGKSFSRRSDLINHQKIHTGEKPYKCDACGKAFSTCTDLIEHQKTHA 589

Query:   563 GIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
               + Y+C  C++  S+   LT H ++H G
Sbjct:   590 EEKPYQCVQCSRSCSQLSELTIHEEVHCG 618

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1N5B8 F1N5B8 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 932 (333.1 bits), Expect = 1.3e-93, P = 1.3e-93
 Identities = 209/501 (41%), Positives = 248/501 (49%)

Query:   107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
             YKCD C K +  K  L  H  +H G + YKCD C K F  K  L  H  +H G K  KC 
Sbjct:   270 YKCDECGKVFRAKSKLLTHQTIHTGQKPYKCDECGKAFHTKSALLTHQTIHTGEKPYKCD 329

Query:   165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLK 222
              C K F  KS L  H   H G K YKC+ C K F  KS L  H  +H  E  YKCD C K
Sbjct:   330 ECGKAFRVKSMLLSHQTIHTGQKPYKCDECGKAFRVKSSLLRHQTIHTGERPYKCDECGK 389

Query:   223 EYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSC 280
              +  K  L  H   H G K  KC  C K F  K  L  H  +H   K  KC+ C + F  
Sbjct:   390 LFRAKSKLLTHQTSHTGQKPYKCDDCGKAFHAKSALLTHQTIHTREKPYKCDECGRAFHA 449

Query:   281 KSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
             KS L  H  +H G   YKCD C K F  K  L  H  VH G K  KC  C K F+  SY 
Sbjct:   450 KSKLLTHQTIHTGEKPYKCDECGKAFRLKSFLLSHQTVHTGEKPYKCDECGKAFADSSYF 509

Query:   339 TEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 396
              +H K+H G K  KC +C K FS K Y+  H  +H  E  YKCD C K +  K  L  H 
Sbjct:   510 RKHQKIHTGQKLFKCHICDKVFSRKAYLAGHQSVHSGEKPYKCDECGKAFLVKSILLSHQ 569

Query:   397 KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
             ++H G K  KC  C K F+ + +L  H K+H G K  KC++C K F    HL  H +VH 
Sbjct:   570 RVHTGEKPYKCGECGKAFTDRSQLRRHQKIHTGQKLFKCDICDKVFIRSEHLAGHQRVHS 629

Query:   455 GIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
             G   YKC+ C K F  K  L  H  +H G K  KCD C K F+ +  L  H K+H G K 
Sbjct:   630 GEKPYKCDECGKAFRVKSILLIHQTVHTGEKPYKCDECGKAFTDRSHLRRHQKIHTGQKL 689

Query:   513 -KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCD 569
              KCD+C K F   + +  H  +H G K  KCD C K F  K TL  H  +H G + YKCD
Sbjct:   690 FKCDICDKVFRRSKQLAGHQSVHSGEKPYKCDECGKAFRVKSTLLRHQTVHTGEKPYKCD 749

Query:   570 LCTKEFSRKGRLTEHMKLHLG 590
              C K F  K  L  H  +H G
Sbjct:   750 ECDKAFRVKSMLLSHQTVHTG 770

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|Q86XN6 ZNF761 "Zinc finger protein 761" [Homo sapiens (taxid:9606)]

 Score = 931 (332.8 bits), Expect = 1.6e-93, P = 1.6e-93
 Identities = 219/539 (40%), Positives = 281/539 (52%)

Query:    69 SC-PKVEVKSDHERRSINYKCQESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMK 127
             SC PK  + ++H     N       +   +++K      ++C+   K ++Y   L +H  
Sbjct:   181 SCRPKTHISNNHGNNFWNSSLLTQKQEVHMREK-----SFQCNESGKAFNYSSLLRKHQI 235

Query:   128 LHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGI 186
             +H   +YKCD+C K F+ KR L  H + H G    KC  C K FS  S LT H + H G 
Sbjct:   236 IHLADKYKCDVCGKLFNQKRNLACHRRCHTGENPYKCNECGKTFSQTSSLTCHRRLHTGE 295

Query:   187 K-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-K 243
             K YKC  C K F  KS L  H  +H +E  YKC+ C K +  K  LT H +LH G K  K
Sbjct:   296 KPYKCEECDKAFHFKSILERHRIIHTEEKPYKCNECGKTFRQKSILTRHHRLHTGEKPYK 355

Query:   244 CVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLC 301
             C  C K FS K  LT H +LH G K  KCN C K FS KS L  H ++H G   YKC+ C
Sbjct:   356 CNECGKTFSHKSSLTCHHRLHTGEKPYKCNECGKTFSHKSSLTCHRRLHTGEKPYKCEEC 415

Query:   302 SKEFYRKQNLTKHMKVH-QGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEF 359
              K +  + N   H K+H +    KC  C K FS  S LT H + H G +  KC+ C K F
Sbjct:   416 DKAYSFRSNFEIHRKIHTEDNAYKCNECGKTFSRTSSLTCHRRRHTGEQPYKCEECDKAF 475

Query:   360 SCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKR 417
               K  +  H ++H  E  YKC+ C K +S K YLT H +LH G K  KC  CSK FS K 
Sbjct:   476 RFKSNLERHRRIHTGEKPYKCNECGKTFSRKSYLTCHHRLHTGEKAYKCNECSKTFSWKS 535

Query:   418 RLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTK 475
              LT H +LH G K  KC  C K F+ +  LK H ++H G   YKC    K +  K NL  
Sbjct:   536 SLTCHRRLHSGEKPYKCKECGKTFNQQLTLKRHRRLHSGENPYKCEDSDKAYSFKSNLEI 595

Query:   476 HMKLH-QGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKL 533
             H K+H +    KC+ C K FS   SLT H +LH G K  KC+ C K F  K ++  H ++
Sbjct:   596 HQKIHTEQNPYKCNECGKTFSRTSSLTCHRRLHTGEKPYKCEECDKAFRVKSNLEGHRRI 655

Query:   534 HLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
             H G K  KC+ C K FS K     H +LH G + YKC+ C K FS+K  L  H +LH G
Sbjct:   656 HTGEKPYKCNECGKTFSRKSYFVCHHRLHTGEKPYKCNECGKNFSQKSSLICHHRLHTG 714

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

UNIPROTKB|F1MJ74 F1MJ74 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 930 (332.4 bits), Expect = 2.1e-93, P = 2.1e-93
 Identities = 190/494 (38%), Positives = 271/494 (54%)

Query:   108 KCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKNK-CVL 165
             KC +C K +S    L+ H ++H G + +KC  CS+ F+C   LT+H ++H G K   C  
Sbjct:   177 KCKICEKVFSKSSNLSRHRRIHTGRKPFKCTECSRAFNCHSLLTQHQRIHAGEKPYICKE 236

Query:   166 CSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKE 223
             C+K F   S+LT+H + H G K YKC +C K F+  S L +H ++H  E  YKC  C K 
Sbjct:   237 CNKAFRRSSFLTQHQRIHTGEKPYKCTVCGKAFTYNSVLIKHQQIHTGEKPYKCTECSKA 296

Query:   224 YSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCK 281
             ++   YL +H ++H G K  KC  CSK F+    LTEH ++H G K  KC  CSK F+  
Sbjct:   297 FTYNSYLIQHQRIHAGEKPYKCTECSKAFTYNSCLTEHQRIHTGEKPYKCTECSKAFTYN 356

Query:   282 SHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKNK-CVLCSKEFSSKSYLT 339
             S L +H ++H G   YKC  CS+ F    +L +H ++H G K   C  C+K F   S+LT
Sbjct:   357 SLLIQHRRIHTGEKPYKCSECSRAFTCNSDLIEHQRIHTGEKPYICKECNKAFRRSSFLT 416

Query:   340 EHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLK 397
              H ++H G K  KC +C K F+    + +H ++H  E  YKC  C K ++    L +H +
Sbjct:   417 RHQRIHAGEKPYKCTVCGKVFTYNSSLIKHRRIHTGEKPYKCTECSKAFTYNSLLIQHQR 476

Query:   398 LHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 455
              H G K  KC +C K F+   RL +H ++H G K  KC  CSK F+  S L +H ++H G
Sbjct:   477 NHTGEKPYKCTVCGKAFTYNSRLIKHQRIHAGEKAYKCTECSKAFTYNSLLTQHRRIHTG 536

Query:   456 IT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKKK 513
                YKC  CSK F     L +H ++H G K  KC  CSK F+   SLT+H ++H   K  
Sbjct:   537 EKPYKCTECSKAFTYNSRLIQHRRIHTGEKPYKCTECSKAFTCNTSLTQHQRIHTAEKPY 596

Query:   514 -CDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL 570
              C  C+K F     +T+H ++H G K  KC  C K F+   +L +H ++H G + YKC  
Sbjct:   597 ICKECNKAFHRSSFLTQHQRIHTGEKPYKCTECGKAFTYHSSLIQHQRIHAGEKPYKCTE 656

Query:   571 CTKEFSRKGRLTEH 584
             C+K F+    L  H
Sbjct:   657 CSKAFTYNSLLIRH 670

GO:0008270 "zinc ion binding" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q5R8X1	ZN665_PONAB	No assigned EC number	0.4051	0.8189	0.7895	yes	N/A
Q9H7R5	ZN665_HUMAN	No assigned EC number	0.4051	0.8189	0.7895	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

No hit with e-value below 0.005

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	591
KOG1074|consensus	958		99.94
KOG3608|consensus	467		99.94
KOG2462|consensus	279		99.93
KOG1074|consensus	958		99.93
KOG3608|consensus	467		99.93
KOG2462|consensus	279		99.92
KOG3623|consensus	1007		99.84
KOG3623|consensus	1007		99.83
KOG3576|consensus	267		99.62
KOG3576|consensus	267		99.59
PLN03086	567	PRLI-interacting factor K; Provisional	99.18
PLN03086	567	PRLI-interacting factor K; Provisional	99.07
PHA00733	128	hypothetical protein	98.94
PHA02768	55	hypothetical protein; Provisional	98.86
PHA00733	128	hypothetical protein	98.86
KOG3993|consensus	500		98.72
PHA02768	55	hypothetical protein; Provisional	98.66
KOG3993|consensus	500		98.6
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.33
PHA00732	79	hypothetical protein	98.19
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.16
PHA00732	79	hypothetical protein	98.04
PF01352	41	KRAB: KRAB box; InterPro: IPR001909 The Krueppel-a	97.99
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.88
PHA00616	44	hypothetical protein	97.87
PHA00616	44	hypothetical protein	97.83
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.83
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.73
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.68
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.66
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.6
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.59
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.45
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.28
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.11
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.81
smart00355	26	ZnF_C2H2 zinc finger.	96.76
smart00355	26	ZnF_C2H2 zinc finger.	96.21
KOG2231|consensus	669		96.18
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.18
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.03
COG5189	423	SFP1 Putative transcriptional repressor regulating	96.02
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	95.95
COG5189	423	SFP1 Putative transcriptional repressor regulating	95.65
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	95.6
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.57
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	95.53
KOG2231|consensus	669		95.43
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.0
COG5236	493	Uncharacterized conserved protein, contains RING Z	94.41
KOG2785|consensus	390		94.2
KOG2482|consensus	423		94.08
KOG2482|consensus	423		93.92
KOG2785|consensus	390		93.83
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	93.75
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.86
PRK04860	160	hypothetical protein; Provisional	92.79
PRK04860	160	hypothetical protein; Provisional	92.47
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.05
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.35
PF01352	41	KRAB: KRAB box; InterPro: IPR001909 The Krueppel-a	90.89
KOG4173|consensus	253		90.09
KOG1146|consensus	1406		88.77
COG5048	467	FOG: Zn-finger [General function prediction only]	88.7
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	88.56
KOG2893|consensus	341		87.59
KOG2893|consensus	341		87.14
KOG1146|consensus	1406		86.54
COG5048	467	FOG: Zn-finger [General function prediction only]	85.05
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	82.62
KOG4173|consensus	253		80.66

>KOG1074|consensus

Probab=99.94  E-value=3.8e-28  Score=243.62  Aligned_cols=269  Identities=28%  Similarity=0.588  Sum_probs=181.3

Q ss_pred             CCcccccccccCChhHHHHHHhhhcCCC-CCCCccccccCChHHHHHHHHhcCCcc-------------ccccccccccC
Q psy8499         322 KNKCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQEIT-------------YKCDLCLKEYS  387 (591)
Q Consensus       322 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~-------------~~C~~C~~~f~  387 (591)
                      +.+|.+|.+.|.+.+.|..|++.|+|++ |+|.+||..|.++.+|..|...|.++-             +.|.+|.-.+.
T Consensus       353 khkCr~CakvfgS~SaLqiHlRSHTGERPfqCnvCG~~FSTkGNLKvH~~rH~e~~p~~~m~p~~~~e~l~~~i~st~~p  432 (958)
T KOG1074|consen  353 KHKCRFCAKVFGSDSALQIHLRSHTGERPFQCNVCGNRFSTKGNLKVHFQRHREKYPHVQMNPHPVQEHLQYVITSTGLP  432 (958)
T ss_pred             cchhhhhHhhcCchhhhhhhhhccCCCCCeeecccccccccccceeeeeeeccccCCccccCCCCchhhhcceeeccccC
Confidence            4589999999999999999999999998 799999999999999999998887542             45666666666


Q ss_pred             CHHHHHHHHHHhC---------------CC--------------------------------------------------
Q psy8499         388 NKIYLTEHLKLHQ---------------GI--------------------------------------------------  402 (591)
Q Consensus       388 ~~~~l~~H~~~h~---------------~~--------------------------------------------------  402 (591)
                      .-.....+....+               +.                                                  
T Consensus       433 ~g~~vpp~k~~~~~~~~e~~~~~~sts~g~~~~~~~~~sv~~~~ts~~~~~~~s~~~~~~~~~i~~~s~e~e~~vs~g~~  512 (958)
T KOG1074|consen  433 YGPSVPPEKAEEEAATVEPKLLVRSTSVGSATESLTPSSVSFGETSAPPLPAFSKFVLMKTVEIKSKSEEPEPAVSEGSA  512 (958)
T ss_pred             CCCCCCCCCCcchhccccccccccccccCCCCCcccccccccccccCCCCCccccccccCCcccccccCCCCcccccccc
Confidence            5433332220000               00                                                  


Q ss_pred             --------------------------------------------------------------------------------
Q psy8499         403 --------------------------------------------------------------------------------  402 (591)
Q Consensus       403 --------------------------------------------------------------------------------  402 (591)
                                                                                                      
T Consensus       513 ~~~~~~gs~l~~s~~ks~~s~~~~~~~~~~~asa~m~~~~~~~~p~g~s~~~~aq~~~l~d~~~~~~~~~~tsseS~kl~  592 (958)
T KOG1074|consen  513 ISGVLEGSPLRMSSGKSVESLPVEADLLNHAASAGMFPPSYVSRPLGPSEDTTAQALQLVDKIPEALIEISTSSESPKLT  592 (958)
T ss_pred             ccccccCCccccccccCccccchhccccchhhccccCCchhhcCCCCcchhhHHHhhhhhccChhhcceeecccCCcccc
Confidence                                                                                            


Q ss_pred             ------------CCccccchhccCCchhHHHHHHHhCCCC-CCccccccccCChhhHHHHHHhhCCc-----ccccc---
Q psy8499         403 ------------KNKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGI-----TYKCN---  461 (591)
Q Consensus       403 ------------~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-----~~~C~---  461 (591)
                                  .++|.+|-+...-+++|+.|.++|+|++ |+|.+||+.|+++.+|+.|+-+|..+     .|.|+   
T Consensus       593 slv~~~~~~~TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~  672 (958)
T KOG1074|consen  593 SLVENSENKRTDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTF  672 (958)
T ss_pred             ccccccccccCCccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchh
Confidence                        0006666666666666666666666666 56666666666666666666666542     36666   


Q ss_pred             cccccccchhhHHHHHHhhCCCC--------------CCCccCccccCChhhHHHHHhhhCC----------------CC
Q psy8499         462 LCSKEFYRKQNLTKHMKLHQGIK--------------KKCDLCSKEFSTKCSLTEHMKLHQG----------------IK  511 (591)
Q Consensus       462 ~C~~~f~~~~~L~~H~~~h~~~~--------------~~C~~C~~~f~~~~~L~~H~~~h~~----------------~~  511 (591)
                      +|.+.|...-.|..|+++|.+..              -+|..|.+.|.....+..++..|.+                +.
T Consensus       673 ic~~kftn~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~  752 (958)
T KOG1074|consen  673 ICQKKFTNAVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEEL  752 (958)
T ss_pred             hhcccccccccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCccccccccccccc
Confidence            66666666666666666665211              1466666666666666666544411                00


Q ss_pred             -----CCCCcchhcccCchhHHHHHHhh-----------------------cC---------------------------
Q psy8499         512 -----KKCDLCSKEFSCKRSVTEHMKLH-----------------------LG---------------------------  536 (591)
Q Consensus       512 -----~~C~~C~~~f~~~~~l~~H~~~h-----------------------~~---------------------------  536 (591)
                           +.+..|+..+.....+..+-..+                       ++                           
T Consensus       753 ~~tp~~~e~~~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~  832 (958)
T KOG1074|consen  753 DVTPPPPENSCGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQ  832 (958)
T ss_pred             ccCCCccccccccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcc
Confidence                 13444554444433332221110                       00                           


Q ss_pred             ---------------------------------------------CCCCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         537 ---------------------------------------------IKNKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       537 ---------------------------------------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                                                                   .+..|.+||+.|.+..+|..|||+|++. ||.|.+
T Consensus       833 ~~~~l~eg~~t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~f  912 (958)
T KOG1074|consen  833 ETSMLNEGLATKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHF  912 (958)
T ss_pred             cccccccccccccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchh
Confidence                                                         0124999999999999999999999985 999999


Q ss_pred             CccccccchhHHhHhhhccC
Q psy8499         571 CTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       571 C~~~f~~~~~l~~H~~~H~~  590 (591)
                      |+++|.++.+|+.||.+|+.
T Consensus       913 C~~aFttrgnLKvHMgtH~w  932 (958)
T KOG1074|consen  913 CEEAFTTRGNLKVHMGTHMW  932 (958)
T ss_pred             hhhhhhhhhhhhhhhccccc
Confidence            99999999999999999985

>KOG3608|consensus

Probab=99.94  E-value=1.6e-26  Score=209.29  Aligned_cols=213  Identities=27%  Similarity=0.562  Sum_probs=184.0

Q ss_pred             cccc--ccccccCCHHHHHHHHHHhCCC-----------C---Cccc--cchhccCCchhHHHHHHHhCCCC-CCccccc
Q psy8499         377 YKCD--LCLKEYSNKIYLTEHLKLHQGI-----------K---NKCV--LCSKEFSRKRRLTEHMKLHLGIK-NKCNLCS  437 (591)
Q Consensus       377 ~~C~--~C~~~f~~~~~l~~H~~~h~~~-----------~---~~C~--~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~  437 (591)
                      |.|.  .|+..|.+...+..|+..|.-.           +   ..|.  .|.+.|.++..|++|++.|++++ ..|+.||
T Consensus       135 f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg  214 (467)
T KOG3608|consen  135 FRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCG  214 (467)
T ss_pred             hccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHH
Confidence            5665  4899999999999998776421           1   2353  58899999999999999999988 6899999


Q ss_pred             cccCChhhHHHHHHhhCC---cccccccccccccchhhHHHHHHhhCCCCCCCccCccccCChhhHHHHHhh-hCCCCC-
Q psy8499         438 KEFSCKSHLKEHMQVHQG---ITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKL-HQGIKK-  512 (591)
Q Consensus       438 ~~f~~~~~l~~H~~~h~~---~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~-  512 (591)
                      .-|+++..|..|.+.-+.   .+|.|..|.|.|.+...|..|+..|-. -|+|+.|+.+....++|.+||+. |...+| 
T Consensus       215 ~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn-~ykCplCdmtc~~~ssL~~H~r~rHs~dkpf  293 (467)
T KOG3608|consen  215 ELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN-CYKCPLCDMTCSSASSLTTHIRYRHSKDKPF  293 (467)
T ss_pred             HHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh-cccccccccCCCChHHHHHHHHhhhccCCCc
Confidence            999999999999887665   689999999999999999999998865 38999999999999999999886 555566 


Q ss_pred             CCCcchhcccCchhHHHHHHhhcCCCCCCCc--chhhcCChhhHHHHhhhcC-Cc---ccccCcCccccccchhHHhHhh
Q psy8499         513 KCDLCSKEFSCKRSVTEHMKLHLGIKNKCDL--CSKEFSTKHTLTEHMKLHQ-GI---RYKCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       513 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~h~-~~---~~~C~~C~~~f~~~~~l~~H~~  586 (591)
                      +|+.|++.|.+.++|.+|..+|+...|.|+.  |.++|.+...|+.|++.++ |.   +|.|..|++.|++-.+|..|+.
T Consensus       294 KCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~  373 (467)
T KOG3608|consen  294 KCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLM  373 (467)
T ss_pred             cccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHH
Confidence            9999999999999999999999977789988  9999999999999998766 43   6999999999999999999977


Q ss_pred             hccC
Q psy8499         587 LHLG  590 (591)
Q Consensus       587 ~H~~  590 (591)
                      .-||
T Consensus       374 kkH~  377 (467)
T KOG3608|consen  374 KKHG  377 (467)
T ss_pred             Hhhc
Confidence            6554

>KOG2462|consensus

Probab=99.93  E-value=1.6e-26  Score=205.00  Aligned_cols=128  Identities=32%  Similarity=0.694  Sum_probs=77.3

Q ss_pred             CCccccccccCChhhHHHHHHhhCC----cccccccccccccchhhHHHHHHhhCCCCCCCccCccccCChhhHHHHHhh
Q psy8499         431 NKCNLCSKEFSCKSHLKEHMQVHQG----ITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKL  506 (591)
Q Consensus       431 ~~C~~C~~~f~~~~~l~~H~~~h~~----~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~  506 (591)
                      ++|+.||+.+.+.++|-+|.+.|..    +.+.|++|||.|.+...|..|+++|+ ...+|.+||+.|.....|+-|+|+
T Consensus       131 ~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~-l~c~C~iCGKaFSRPWLLQGHiRT  209 (279)
T KOG2462|consen  131 YKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT-LPCECGICGKAFSRPWLLQGHIRT  209 (279)
T ss_pred             eeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC-CCcccccccccccchHHhhccccc
Confidence            4566666666666666666655543    34566666666666666666666665 335566666666666666666666


Q ss_pred             hCCCCC-CCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhh
Q psy8499         507 HQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMK  559 (591)
Q Consensus       507 h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~  559 (591)
                      |+|++| .|+.|++.|+++++|+.||++|.+.+ |+|..|+|+|..++.|..|..
T Consensus       210 HTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  210 HTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             ccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            666666 66666666666666666666666555 566666666666666666643

>KOG1074|consensus

Probab=99.93  E-value=3.8e-27  Score=236.47  Aligned_cols=214  Identities=24%  Similarity=0.536  Sum_probs=134.3

Q ss_pred             CCCccccccCChHHHHHHHHhcC-CccccccccccccCCHHHHHHHHHHhCCCC-----Cccc---cchhccCCchhHHH
Q psy8499         351 KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK-----NKCV---LCSKEFSRKRRLTE  421 (591)
Q Consensus       351 ~C~~C~~~f~~~~~l~~H~~~h~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-----~~C~---~C~~~f~~~~~l~~  421 (591)
                      +|-+|.+....++.|+.|.++|. |+||+|.+||+.|.++.+|+.|+-+|....     +.|+   +|-+.|.....|..
T Consensus       607 qCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lpQ  686 (958)
T KOG1074|consen  607 QCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLPQ  686 (958)
T ss_pred             ceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccccc
Confidence            47777777777777777777775 677777777777777777777776665432     4666   67777777777777


Q ss_pred             HHHHhCCCC--------------CCccccccccCChhhHHHHHHhhCC-----------------c----cccccccccc
Q psy8499         422 HMKLHLGIK--------------NKCNLCSKEFSCKSHLKEHMQVHQG-----------------I----TYKCNLCSKE  466 (591)
Q Consensus       422 H~~~h~~~~--------------~~C~~C~~~f~~~~~l~~H~~~h~~-----------------~----~~~C~~C~~~  466 (591)
                      |+++|.+..              -+|..|.+.|.....+..++..|.+                 .    +..+..|+..
T Consensus       687 hIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~~~~~  766 (958)
T KOG1074|consen  687 HIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENSCGRE  766 (958)
T ss_pred             eEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccccccc
Confidence            777765311              1567777777666666655544411                 1    3456666666


Q ss_pred             ccchhhHHHHHHhh-----------------------CCCC-C-CCccCccccCChhhHH----HHH-------------
Q psy8499         467 FYRKQNLTKHMKLH-----------------------QGIK-K-KCDLCSKEFSTKCSLT----EHM-------------  504 (591)
Q Consensus       467 f~~~~~L~~H~~~h-----------------------~~~~-~-~C~~C~~~f~~~~~L~----~H~-------------  504 (591)
                      +.....+..+--.+                       ++.+ . .+..++..-...-...    .=.             
T Consensus       767 ~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~t~~n  846 (958)
T KOG1074|consen  767 LEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLATKTN  846 (958)
T ss_pred             cCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccccccc
Confidence            66555544432111                       1111 1 2434432221111000    000             


Q ss_pred             -hhhCC-------------------------CCCCCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHH
Q psy8499         505 -KLHQG-------------------------IKKKCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEH  557 (591)
Q Consensus       505 -~~h~~-------------------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H  557 (591)
                       .++.+                         .+..|.+|++.|.+..+|+.|+|+|+|++ |.|.+|++.|.++.+|+.|
T Consensus       847 ~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgnLKvH  926 (958)
T KOG1074|consen  847 EITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGNLKVH  926 (958)
T ss_pred             cccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhhhhhh
Confidence             00000                         01159999999999999999999999999 6999999999999999999


Q ss_pred             hhhcCCc
Q psy8499         558 MKLHQGI  564 (591)
Q Consensus       558 ~~~h~~~  564 (591)
                      |.+|.+.
T Consensus       927 MgtH~w~  933 (958)
T KOG1074|consen  927 MGTHMWV  933 (958)
T ss_pred             hcccccc
Confidence            9999875

>KOG3608|consensus

Probab=99.93  E-value=3.6e-25  Score=200.57  Aligned_cols=178  Identities=27%  Similarity=0.541  Sum_probs=97.5

Q ss_pred             cccccCCHHHHHHHHHHhCCCC-CccccchhccCCchhHHHHHHHhCCC---CCCccccccccCChhhHHHHHHhhCCcc
Q psy8499         382 CLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGI---KNKCNLCSKEFSCKSHLKEHMQVHQGIT  457 (591)
Q Consensus       382 C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~---~~~C~~C~~~f~~~~~l~~H~~~h~~~~  457 (591)
                      |-+.+.+++.|++|++.|++++ ..|+.||..|.++..|..|++..+..   .|.|..|.|.|.+...|+.|+..|-. -
T Consensus       185 Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn-~  263 (467)
T KOG3608|consen  185 CTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVN-C  263 (467)
T ss_pred             hhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhh-c
Confidence            5555555555555555555555 35555555555555555555544322   24555555555555555555555543 3


Q ss_pred             cccccccccccchhhHHHHHHhhC-CCC-CCCccCccccCChhhHHHHHhhhCCCCCCCCc--chhcccCchhHHHHHHh
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMKLHQ-GIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDL--CSKEFSCKRSVTEHMKL  533 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~~h~-~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~--C~~~f~~~~~l~~H~~~  533 (591)
                      |+|+.|+.+....+.|..|++.-+ ..+ |+|+.|++.|.+.+.|.+|..+|+....+|+.  |..+|.+...|++|++.
T Consensus       264 ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS~~~y~C~h~~C~~s~r~~~q~~~H~~e  343 (467)
T KOG3608|consen  264 YKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHSKTVYQCEHPDCHYSVRTYTQMRRHFLE  343 (467)
T ss_pred             ccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhccccceecCCCCCcHHHHHHHHHHHHHHH
Confidence            555555555555555555555422 222 45555555555555555555555544445555  55555555555555554


Q ss_pred             hc-CC---CCCCCcchhhcCChhhHHHHhhh
Q psy8499         534 HL-GI---KNKCDLCSKEFSTKHTLTEHMKL  560 (591)
Q Consensus       534 h~-~~---~~~C~~C~~~f~~~~~l~~H~~~  560 (591)
                      ++ |.   .|.|..|++.|++-.+|..|++.
T Consensus       344 vhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~k  374 (467)
T KOG3608|consen  344 VHEGNNPILYACHCCDRFFTSGKSLSAHLMK  374 (467)
T ss_pred             hccCCCCCceeeecchhhhccchhHHHHHHH
Confidence            43 22   24566666666666666666543

>KOG2462|consensus

Probab=99.92  E-value=2.2e-26  Score=204.00  Aligned_cols=130  Identities=30%  Similarity=0.666  Sum_probs=121.5

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC----CCCccCccccCChhhHHHHHhhhCCCCCCCCcchhcccCchhHHHHH
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK----KKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHM  531 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~----~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~  531 (591)
                      ..|+|+.||+.+.+.++|.+|.++|-...    +.|++||+.|.+...|+.|+++|+ ..-+|.+|||.|...-.|+-|+
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~-l~c~C~iCGKaFSRPWLLQGHi  207 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT-LPCECGICGKAFSRPWLLQGHI  207 (279)
T ss_pred             CceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC-CCcccccccccccchHHhhccc
Confidence            35999999999999999999999997533    689999999999999999999998 3348999999999999999999


Q ss_pred             HhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhh
Q psy8499         532 KLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       532 ~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~  586 (591)
                      |+|+|++ |.|..|+++|..+++|+.||++|.+. +|+|..|+|+|..++.|.+|..
T Consensus       208 RTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  208 RTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             ccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            9999999 79999999999999999999999985 8999999999999999999965

>KOG3623|consensus

Probab=99.84  E-value=2e-21  Score=192.05  Aligned_cols=102  Identities=32%  Similarity=0.659  Sum_probs=92.1

Q ss_pred             CCCCccccccCChHHHHHHHHhcC---CccccccccccccCCHHHHHHHHHHhCC--------------CCCccccchhc
Q psy8499         350 NKCDLCSKEFSCKRYVTEHMKLHQ---EITYKCDLCLKEYSNKIYLTEHLKLHQG--------------IKNKCVLCSKE  412 (591)
Q Consensus       350 ~~C~~C~~~f~~~~~l~~H~~~h~---~~~~~C~~C~~~f~~~~~l~~H~~~h~~--------------~~~~C~~C~~~  412 (591)
                      ..|++|.+.+.....|..|++.-+   +..|.|..|.++|..+..|.+|+.+|..              .+++|..|||.
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA  290 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA  290 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh
Confidence            379999999999999999987643   5679999999999999999999998853              24799999999


Q ss_pred             cCCchhHHHHHHHhCCCC-CCccccccccCChhhHHHHHH
Q psy8499         413 FSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQ  451 (591)
Q Consensus       413 f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~  451 (591)
                      |..+..|++|+|+|.|++ |.|+.|+|+|.....+-.||.
T Consensus       291 FKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  291 FKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            999999999999999998 899999999999888888874

>KOG3623|consensus

Probab=99.83  E-value=2.6e-21  Score=191.30  Aligned_cols=102  Identities=34%  Similarity=0.679  Sum_probs=92.3

Q ss_pred             CCccccccccCChHHHHHHHhhhCCc---eeecccCccccCCHHHHHHHHHHhcC--------------CCCcccccccc
Q psy8499         269 NKCNLCSKEFSCKSHLKEHMQVHQGI---TYKCDLCSKEFYRKQNLTKHMKVHQG--------------MKNKCVLCSKE  331 (591)
Q Consensus       269 ~~C~~C~~~f~~~~~L~~H~~~h~~~---~~~C~~C~~~f~~~~~L~~H~~~h~~--------------~~~~C~~C~~~  331 (591)
                      ..|++|.+.+.....|+.|++.-+.+   .|.|..|..+|..+..|.+|+.+|..              .+|+|..||+.
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECgKA  290 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECGKA  290 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccchh
Confidence            37999999999999999998755433   69999999999999999999998853              25799999999


Q ss_pred             cCChhHHHHHHhhhcCCC-CCCCccccccCChHHHHHHHH
Q psy8499         332 FSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMK  370 (591)
Q Consensus       332 f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~  370 (591)
                      |..+..|+.|+++|.|++ |.|+.|++.|.....+..||.
T Consensus       291 FKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  291 FKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            999999999999999998 899999999999999999973

>KOG3576|consensus

Probab=99.62  E-value=1e-16  Score=134.68  Aligned_cols=106  Identities=31%  Similarity=0.710  Sum_probs=67.5

Q ss_pred             ccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHhh
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLH  534 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h  534 (591)
                      .|.|.+|+|.|.....|.+|++-|...+ +-|..||+.|...-.|++|+|+|+|.+| +|..|++.|..+-+|..|++.-
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kv  196 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKV  196 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHH
Confidence            4777777777777777777777777655 5677777777777777777777777666 6777777777766666666544


Q ss_pred             cCCC------------CCCCcchhhcCChhhHHHHhhhcC
Q psy8499         535 LGIK------------NKCDLCSKEFSTKHTLTEHMKLHQ  562 (591)
Q Consensus       535 ~~~~------------~~C~~C~~~f~~~~~l~~H~~~h~  562 (591)
                      +|..            |.|+.||.+-.....+..|++.|+
T Consensus       197 hgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~h  236 (267)
T KOG3576|consen  197 HGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHH  236 (267)
T ss_pred             cCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcC
Confidence            4321            234444444444444444444443

>KOG3576|consensus

Probab=99.59  E-value=4e-16  Score=131.10  Aligned_cols=107  Identities=34%  Similarity=0.672  Sum_probs=74.3

Q ss_pred             CccccchhccCCchhHHHHHHHhCCCC-CCccccccccCChhhHHHHHHhhCC-cccccccccccccchhhHHHHHHhhC
Q psy8499         404 NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQ  481 (591)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~  481 (591)
                      +.|.+|++.|.-...|.+|++-|...+ +-|..||+.|.+.-.|++|+++|+| +||+|..|+++|+.+-.|..|++.-+
T Consensus       118 ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kvh  197 (267)
T KOG3576|consen  118 FTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKVH  197 (267)
T ss_pred             eeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHHc
Confidence            456666666666666677776666654 5677777777777777777777777 67777777777777777777766554


Q ss_pred             CCC------------CCCccCccccCChhhHHHHHhhhCCC
Q psy8499         482 GIK------------KKCDLCSKEFSTKCSLTEHMKLHQGI  510 (591)
Q Consensus       482 ~~~------------~~C~~C~~~f~~~~~L~~H~~~h~~~  510 (591)
                      |..            |.|+.||.+-.....+..|+..|+..
T Consensus       198 gv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  198 GVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             CchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            432            45777777777777777777666553

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.18  E-value=3.6e-11  Score=121.79  Aligned_cols=144  Identities=18%  Similarity=0.401  Sum_probs=88.7

Q ss_pred             CccccccccCChhhHHHHHHhhCCccccccc--ccccccchhhHHHHHHhhCCCCCCCccCccccCChhhHHHHHhhhCC
Q psy8499         432 KCNLCSKEFSCKSHLKEHMQVHQGITYKCNL--CSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQG  509 (591)
Q Consensus       432 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~  509 (591)
                      .|+.|...... ..|..|.....-..-.|+.  ||..| .+..|..|        +.|+.|++.|. ...|..|+++|+ 
T Consensus       409 ~C~NC~~~i~l-~~l~lHe~~C~r~~V~Cp~~~Cg~v~-~r~el~~H--------~~C~~Cgk~f~-~s~LekH~~~~H-  476 (567)
T PLN03086        409 ECRNCKHYIPS-RSIALHEAYCSRHNVVCPHDGCGIVL-RVEEAKNH--------VHCEKCGQAFQ-QGEMEKHMKVFH-  476 (567)
T ss_pred             ECCCCCCccch-hHHHHHHhhCCCcceeCCccccccee-eccccccC--------ccCCCCCCccc-hHHHHHHHHhcC-
Confidence            46666555442 3344555443333345653  66666 33444444        25777777774 466777777764 


Q ss_pred             CCCCCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcC----------ChhhHHHHhhhcCCcccccCcCccccccc
Q psy8499         510 IKKKCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFS----------TKHTLTEHMKLHQGIRYKCDLCTKEFSRK  578 (591)
Q Consensus       510 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~C~~C~~~f~~~  578 (591)
                      ....|+ |++.+ .+..|..|+.+|.+.+ +.|.+|++.|.          ....|..|.......++.|..||+.|..+
T Consensus       477 kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~CG~rt~~C~~Cgk~Vrlr  554 (567)
T PLN03086        477 EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESICGSRTAPCDSCGRSVMLK  554 (567)
T ss_pred             CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhcCCcceEccccCCeeeeh
Confidence            233677 77544 5567777777777666 47777777774          23578888888766688888888887655


Q ss_pred             hhHHhHhhhccC
Q psy8499         579 GRLTEHMKLHLG  590 (591)
Q Consensus       579 ~~l~~H~~~H~~  590 (591)
                      . |..|+..-|.
T Consensus       555 d-m~~H~~~~h~  565 (567)
T PLN03086        555 E-MDIHQIAVHQ  565 (567)
T ss_pred             h-HHHHHHHhhc
Confidence            4 7777766543

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.07  E-value=2.5e-10  Score=115.76  Aligned_cols=59  Identities=20%  Similarity=0.626  Sum_probs=28.1

Q ss_pred             CccccccccCChhhHHHHHHhhCCcccccccccccccchhhHHHHHHhhCCCC-CCCccCcccc
Q psy8499         432 KCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEF  494 (591)
Q Consensus       432 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f  494 (591)
                      .|+.|++.|. ...|..|+.+++ .+|.|+ ||+.+ .+..|..|+.+|.+.+ +.|+.|++.|
T Consensus       455 ~C~~Cgk~f~-~s~LekH~~~~H-kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v  514 (567)
T PLN03086        455 HCEKCGQAFQ-QGEMEKHMKVFH-EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMV  514 (567)
T ss_pred             cCCCCCCccc-hHHHHHHHHhcC-CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCcc
Confidence            4555555553 344555555543 445555 55432 3345555554444433 3455555544

>PHA00733 hypothetical protein

Probab=98.94  E-value=4.8e-10  Score=92.35  Aligned_cols=78  Identities=19%  Similarity=0.311  Sum_probs=59.8

Q ss_pred             CCCcchhcccCchhHHHH------HHhhcCCCCCCCcchhhcCChhhHHHHhhhcCCcccccCcCccccccchhHHhHhh
Q psy8499         513 KCDLCSKEFSCKRSVTEH------MKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       513 ~C~~C~~~f~~~~~l~~H------~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  586 (591)
                      .|.+|.+.|.....|..+      +..+...++.|+.||+.|.+...|..|++.| ..+|.|++|+++|.....|..|+.
T Consensus        42 ~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~F~~~~sL~~H~~  120 (128)
T PHA00733         42 IRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKEFRNTDSTLDHVC  120 (128)
T ss_pred             HHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCccCCHHHHHHHHH
Confidence            566666666655554444      3444444578999999999999999999876 347999999999999999999999


Q ss_pred             hccCC
Q psy8499         587 LHLGI  591 (591)
Q Consensus       587 ~H~~~  591 (591)
                      ..|+|
T Consensus       121 ~~h~~  125 (128)
T PHA00733        121 KKHNI  125 (128)
T ss_pred             HhcCc
Confidence            88876

>PHA02768 hypothetical protein; Provisional

Probab=98.86  E-value=1e-09  Score=73.16  Aligned_cols=43  Identities=19%  Similarity=0.520  Sum_probs=37.6

Q ss_pred             CCCCcchhhcCChhhHHHHhhhcCCcccccCcCccccccchhHH
Q psy8499         539 NKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLT  582 (591)
Q Consensus       539 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~  582 (591)
                      |.|+.||+.|....+|..||++|+ ++|+|..|++.|.+.+.|.
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceecccceeE
Confidence            689999999999999999999988 6889999999998887764

>PHA00733 hypothetical protein

Probab=98.86  E-value=3.1e-09  Score=87.59  Aligned_cols=50  Identities=28%  Similarity=0.536  Sum_probs=22.7

Q ss_pred             CCccccccccCChhhHHHHHHhhCCcccccccccccccchhhHHHHHHhhC
Q psy8499         431 NKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQ  481 (591)
Q Consensus       431 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~  481 (591)
                      +.|+.||+.|.+...|..|++.| ..+|.|+.|++.|.....|..|+...+
T Consensus        74 y~C~~Cgk~Fss~s~L~~H~r~h-~~~~~C~~CgK~F~~~~sL~~H~~~~h  123 (128)
T PHA00733         74 YVCPLCLMPFSSSVSLKQHIRYT-EHSKVCPVCGKEFRNTDSTLDHVCKKH  123 (128)
T ss_pred             ccCCCCCCcCCCHHHHHHHHhcC-CcCccCCCCCCccCCHHHHHHHHHHhc
Confidence            44444444444444444444433 123444444444444444444444333

>KOG3993|consensus

Probab=98.72  E-value=2e-09  Score=101.63  Aligned_cols=185  Identities=21%  Similarity=0.305  Sum_probs=102.4

Q ss_pred             cccccccccccCCHHHHHHHHHHh-CCCCCccccchhccCCchhHHHHHHHhCCCCCCcc--cc--ccccCChhhHHHHH
Q psy8499         376 TYKCDLCLKEYSNKIYLTEHLKLH-QGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCN--LC--SKEFSCKSHLKEHM  450 (591)
Q Consensus       376 ~~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~--~C--~~~f~~~~~l~~H~  450 (591)
                      .|.|..|...|.+...|.+|.-.- --..|+|+.|+|.|+-..+|..|.|.|....-.=.  .=  .+.-.+....+.--
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~  346 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAE  346 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhcc
Confidence            489999999999999999985211 11238899999999999999999888854321000  00  00000011111101


Q ss_pred             Hhh---CCcccccccccccccchhhHHHHHHhhCCCC------------------CCCccCccccCChhhHHHHHhhhCC
Q psy8499         451 QVH---QGITYKCNLCSKEFYRKQNLTKHMKLHQGIK------------------KKCDLCSKEFSTKCSLTEHMKLHQG  509 (591)
Q Consensus       451 ~~h---~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~------------------~~C~~C~~~f~~~~~L~~H~~~h~~  509 (591)
                      +.-   ....|.|.+|+|+|.+..-|++|+.+|+...                  +-|+.|+-.+.....--.+...+.+
T Consensus       347 rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~  426 (500)
T KOG3993|consen  347 RSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAG  426 (500)
T ss_pred             ccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeec
Confidence            100   1135889999999999999999988876421                  1244444333333222222222221


Q ss_pred             --CCCCCCcchhcccCchhHHHHHHhhcCC-CCCCCcchhhcCChhhHHHHhhh
Q psy8499         510 --IKKKCDLCSKEFSCKRSVTEHMKLHLGI-KNKCDLCSKEFSTKHTLTEHMKL  560 (591)
Q Consensus       510 --~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~  560 (591)
                        +...|++|+..+.++..--.+.+.-... -|.|.+|..+|.+...|.+|+..
T Consensus       427 sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  427 SAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             cccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhh
Confidence              1125666666666555443333322212 25666777777777777776543

>PHA02768 hypothetical protein; Provisional

Probab=98.66  E-value=1.2e-08  Score=68.09  Aligned_cols=40  Identities=18%  Similarity=0.545  Sum_probs=18.1

Q ss_pred             cccccccccccchhhHHHHHHhhCCCCCCCccCccccCChh
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKC  498 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~  498 (591)
                      |.|+.||+.|...++|..|+++|+ ..++|..|++.|...+
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~-k~~kc~~C~k~f~~~s   45 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN-TNLKLSNCKRISLRTG   45 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC-CcccCCcccceecccc
Confidence            444444444444444444444444 2334444444444433

>KOG3993|consensus

Probab=98.60  E-value=4.9e-09  Score=99.01  Aligned_cols=184  Identities=18%  Similarity=0.273  Sum_probs=117.2

Q ss_pred             CccccchhccCCchhHHHHHHHh-CCCCCCccccccccCChhhHHHHHHhhCCcccccc--c-ccc-cccchhhHHHHHH
Q psy8499         404 NKCVLCSKEFSRKRRLTEHMKLH-LGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCN--L-CSK-EFYRKQNLTKHMK  478 (591)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~--~-C~~-~f~~~~~L~~H~~  478 (591)
                      |.|..|...|.....|.+|.-.- --..|+|+.|+|.|.-..+|..|.|.|..++=.=.  . =.+ .-.+....+.=.|
T Consensus       268 yiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea~r  347 (500)
T KOG3993|consen  268 YICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEAER  347 (500)
T ss_pred             HHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhccc
Confidence            68999999999999999996211 11348999999999999999999999975321100  0 000 0001111110001


Q ss_pred             h---hCCCCCCCccCccccCChhhHHHHHhhhCCCCC------------------CCCcchhcccCchhHHHHHHhhcCC
Q psy8499         479 L---HQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKK------------------KCDLCSKEFSCKRSVTEHMKLHLGI  537 (591)
Q Consensus       479 ~---h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~------------------~C~~C~~~f~~~~~l~~H~~~h~~~  537 (591)
                      .   -+..-|.|.+|++.|.....|+.|..+|+....                  -|+.|.-.+.....--.+...+.+.
T Consensus       348 sg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~s  427 (500)
T KOG3993|consen  348 SGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGS  427 (500)
T ss_pred             cCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeecc
Confidence            0   011237899999999999999999988864211                  2444444444333322222222222


Q ss_pred             --CCCCCcchhhcCChhhHHHHhhhcCC-cccccCcCccccccchhHHhHhhh
Q psy8499         538 --KNKCDLCSKEFSTKHTLTEHMKLHQG-IRYKCDLCTKEFSRKGRLTEHMKL  587 (591)
Q Consensus       538 --~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~l~~H~~~  587 (591)
                        ...|+.|+..+.++..--.+.|.-.. .-|.|.+|..+|...-.|.+|+..
T Consensus       428 ael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  428 AELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             ccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhh
Confidence              23688899888887765555543222 359999999999999999999765

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.33  E-value=2.9e-07  Score=52.40  Aligned_cols=25  Identities=48%  Similarity=0.939  Sum_probs=19.7

Q ss_pred             hHHHHhhhcCCc-ccccCcCcccccc
Q psy8499         553 TLTEHMKLHQGI-RYKCDLCTKEFSR  577 (591)
Q Consensus       553 ~l~~H~~~h~~~-~~~C~~C~~~f~~  577 (591)
                      +|..||++|+|+ ||+|++|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            477888888875 7888888888863

...

>PHA00732 hypothetical protein

Probab=98.19  E-value=1.2e-06  Score=65.02  Aligned_cols=45  Identities=24%  Similarity=0.541  Sum_probs=26.0

Q ss_pred             CCCcchhcccCchhHHHHHHh-hcCCCCCCCcchhhcCChhhHHHHhhhcC
Q psy8499         513 KCDLCSKEFSCKRSVTEHMKL-HLGIKNKCDLCSKEFSTKHTLTEHMKLHQ  562 (591)
Q Consensus       513 ~C~~C~~~f~~~~~l~~H~~~-h~~~~~~C~~C~~~f~~~~~l~~H~~~h~  562 (591)
                      +|+.|++.|.+..+|+.|++. |.+  +.|+.||++|.   .|..|+++..
T Consensus         3 ~C~~Cgk~F~s~s~Lk~H~r~~H~~--~~C~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          3 KCPICGFTTVTLFALKQHARRNHTL--TKCPVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             cCCCCCCccCCHHHHHHHhhcccCC--CccCCCCCEeC---ChhhhhcccC
Confidence            466666666666666666653 433  35666666665   3556655443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.16  E-value=1.2e-06  Score=49.77  Aligned_cols=24  Identities=46%  Similarity=1.009  Sum_probs=16.0

Q ss_pred             hHHHHHHhhCC-ccccccccccccc
Q psy8499         445 HLKEHMQVHQG-ITYKCNLCSKEFY  468 (591)
Q Consensus       445 ~l~~H~~~h~~-~~~~C~~C~~~f~  468 (591)
                      +|..|+++|++ +||.|+.|+++|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            35666666666 6677777777665

...

>PHA00732 hypothetical protein

Probab=98.04  E-value=3e-06  Score=62.91  Aligned_cols=45  Identities=27%  Similarity=0.594  Sum_probs=23.1

Q ss_pred             ccccccccccccchhhHHHHHHh-hCCCCCCCccCccccCChhhHHHHHhh
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKL-HQGIKKKCDLCSKEFSTKCSLTEHMKL  506 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~-h~~~~~~C~~C~~~f~~~~~L~~H~~~  506 (591)
                      ||.|+.||+.|.+..+|..|++. |.+  +.|+.||++|.   .|..|+.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~--~~C~~CgKsF~---~l~~H~~~   46 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL--TKCPVCNKSYR---RLNQHFYS   46 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC--CccCCCCCEeC---Chhhhhcc
Confidence            35555555555555555555553 332  34555555554   34555543

>PF01352 KRAB: KRAB box; InterPro: IPR001909 The Krueppel-associated box (KRAB) is a domain of around 75 amino acids that is found in the N-terminal part of about one third of eukaryotic Krueppel-type C2H2 zinc finger proteins (ZFPs) []

Probab=97.99  E-value=6.4e-07  Score=56.79  Aligned_cols=33  Identities=12%  Similarity=-0.066  Sum_probs=23.7

Q ss_pred             ccccccccccccccCcchhh-hhhhccccCCCcc
Q psy8499          42 SNESDRINIEENDWNDAVTR-DCLEFFKSCPKVE   74 (591)
Q Consensus        42 ~~~~~~~~~~~~~~q~~l~~-vmle~~~~~~s~~   74 (591)
                      ..++.++|..++++|++||+ +|+|||.++.|+|
T Consensus         8 v~fs~eEW~~L~~~Qk~ly~dvm~Eny~~l~slG   41 (41)
T PF01352_consen    8 VYFSQEEWELLDPAQKNLYRDVMLENYRNLVSLG   41 (41)
T ss_dssp             T---HHHHHTS-HHHHHHHHHHHHHTTTS---S-
T ss_pred             EEcChhhcccccceecccchhHHHHhhcccEecC
Confidence            35788899999999999999 9999999999875

It is enriched in charged amino acids and can be divided into subregions A and B, which are predicted to fold into two amphipathic alpha-helices. The KRAB A and B boxes can be separated by variable spacer segments and many KRAB proteins contain only the A box []. The functions currently known for members of the KRAB-containing protein family include transcriptional repression of RNA polymerase I, II, and III promoters, binding and splicing of RNA, and control of nucleolus function. The KRAB domain functions as a transcriptional repressor when tethered to the template DNA by a DNA-binding domain. A sequence of 45 amino acids in the KRAB A subdomain has been shown to be necessary and sufficient for transcriptional repression. The B box does not repress by itself but does potentiate the repression exerted by the KRAB A subdomain [, ]. Gene silencing requires the binding of the KRAB domain to the RING-B box-coiled coil (RBCC) domain of the KAP-1/TIF1-beta corepressor. As KAP-1 binds to the heterochromatin proteins HP1, it has been proposed that the KRAB-ZFP-bound target gene could be silenced following recruitment to heterochromatin [, ]. KRAB-ZFPs probably constitute the single largest class of transcription factors within the human genome []. Although the function of KRAB-ZFPs is largely unknown, they appear to play important roles during cell differentiation and development. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B.; GO: 0003676 nucleic acid binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1V65_A.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.88  E-value=1.4e-05  Score=55.01  Aligned_cols=50  Identities=22%  Similarity=0.474  Sum_probs=35.4

Q ss_pred             CCCCCcchhhcCChhhHHHHhhh-cCC--cccccCcCccccccchhHHhHhhhccC
Q psy8499         538 KNKCDLCSKEFSTKHTLTEHMKL-HQG--IRYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       538 ~~~C~~C~~~f~~~~~l~~H~~~-h~~--~~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      .|.|++|++ ..+..+|..|... |.+  +.+.|++|...+.  .+|..|+..+|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            367888888 4566788888654 433  2588888887655  378888887764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PHA00616 hypothetical protein

Probab=97.87  E-value=4.4e-06  Score=53.04  Aligned_cols=26  Identities=27%  Similarity=0.461  Sum_probs=13.8

Q ss_pred             ccccCcCccccccchhHHhHhhhccC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      ||+|+.||+.|..+++|..|++.|||
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg   26 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHK   26 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcC
Confidence            34555555555555555555555554

>PHA00616 hypothetical protein

Probab=97.83  E-value=8.2e-06  Score=51.85  Aligned_cols=28  Identities=21%  Similarity=0.484  Sum_probs=15.8

Q ss_pred             ccccccccccccchhhHHHHHHhhCCCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      ||+|+.||+.|..+++|..|++.|+|.+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~   28 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQN   28 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCC
Confidence            4555555555555555555555555543

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.83  E-value=6.1e-06  Score=45.65  Aligned_cols=23  Identities=52%  Similarity=1.051  Sum_probs=17.4

Q ss_pred             cccCcCccccccchhHHhHhhhc
Q psy8499         566 YKCDLCTKEFSRKGRLTEHMKLH  588 (591)
Q Consensus       566 ~~C~~C~~~f~~~~~l~~H~~~H  588 (591)
                      |+|+.|++.|.+++.|..|+++|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.73  E-value=1.3e-05  Score=64.15  Aligned_cols=73  Identities=25%  Similarity=0.488  Sum_probs=18.9

Q ss_pred             CCccCccccCChhhHHHHHhhhCCCCCCCCcchhcccCchhHHHHHHhhcCCCCCCCcchhhcCChhhHHHHhhhc
Q psy8499         486 KCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLH  561 (591)
Q Consensus       486 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h  561 (591)
                      +|..|+..|.+...|..||...++....   ....+.....+..+++.-.+..+.|.+|++.|.+..+|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP---DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ---------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc---cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            4788888888888888888766654321   112223444455555444444567888888888888888888754

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.68  E-value=2.5e-05  Score=43.17  Aligned_cols=22  Identities=50%  Similarity=1.050  Sum_probs=11.7

Q ss_pred             cccccccccccchhhHHHHHHh
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMKL  479 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~~  479 (591)
                      |.|+.|++.|.++..|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            4455555555555555555544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.66  E-value=8.4e-05  Score=51.16  Aligned_cols=20  Identities=25%  Similarity=0.740  Sum_probs=8.9

Q ss_pred             cccccccccccchhhHHHHHH
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMK  478 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~  478 (591)
                      |.||+|++ ..+...|..|..
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~   22 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCE   22 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHH
Confidence            44555555 233344555533

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.60  E-value=2.5e-05  Score=62.45  Aligned_cols=73  Identities=23%  Similarity=0.477  Sum_probs=15.7

Q ss_pred             ccccccccccchhhHHHHHHhhCCCCCCCccCccccCChhhHHHHHhhhCCCCCCCCcchhcccCchhHHHHHHhh
Q psy8499         459 KCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLH  534 (591)
Q Consensus       459 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h  534 (591)
                      +|..|+..|.+...|..|+...++....   ....+.....+..+++.-......|.+|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~---~~~~l~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP---DQKYLVDPNRLLNYLRKKVKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ---------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc---cccccccccccccccccccCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            3667777777777777776655554321   112222334444444433333346777777777777777777653

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.59  E-value=2.7e-05  Score=43.60  Aligned_cols=24  Identities=38%  Similarity=0.915  Sum_probs=16.3

Q ss_pred             cccCcCccccccchhHHhHhhhcc
Q psy8499         566 YKCDLCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       566 ~~C~~C~~~f~~~~~l~~H~~~H~  589 (591)
                      |.|++|++.|.+...|+.|+++|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            567777777777777777777764

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.45  E-value=5.8e-05  Score=43.58  Aligned_cols=26  Identities=38%  Similarity=0.724  Sum_probs=22.1

Q ss_pred             ccccCcCccccccchhHHhHhhhccC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      ||.|+.|++.|.+...|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57888899999888888888888865

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.28  E-value=0.00018  Score=40.13  Aligned_cols=23  Identities=39%  Similarity=0.979  Sum_probs=10.1

Q ss_pred             cccccccccccchhhHHHHHHhh
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMKLH  480 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~~h  480 (591)
                      |.|++|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            34445555555555555554443

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.11  E-value=0.00024  Score=40.93  Aligned_cols=25  Identities=28%  Similarity=0.651  Sum_probs=15.6

Q ss_pred             ccccccccccccchhhHHHHHHhhC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQ  481 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~  481 (591)
                      ||.|+.|++.|.+..+|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            4566666666666666666665553

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.81  E-value=0.0005  Score=38.28  Aligned_cols=24  Identities=42%  Similarity=0.718  Sum_probs=17.4

Q ss_pred             cccCcCccccccchhHHhHhhhccC
Q psy8499         566 YKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       566 ~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      |+|+.|+++.. ...|.+|+++|+|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            67888888887 7788888888764

>smart00355 ZnF_C2H2 zinc finger

Probab=96.76  E-value=0.00079  Score=38.20  Aligned_cols=24  Identities=46%  Similarity=0.904  Sum_probs=13.9

Q ss_pred             cccCcCccccccchhHHhHhhhcc
Q psy8499         566 YKCDLCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       566 ~~C~~C~~~f~~~~~l~~H~~~H~  589 (591)
                      |.|+.|+++|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            455666666666666666665543

>smart00355 ZnF_C2H2 zinc finger

Probab=96.21  E-value=0.0037  Score=35.31  Aligned_cols=19  Identities=47%  Similarity=0.962  Sum_probs=7.6

Q ss_pred             CccCccccCChhhHHHHHh
Q psy8499         487 CDLCSKEFSTKCSLTEHMK  505 (591)
Q Consensus       487 C~~C~~~f~~~~~L~~H~~  505 (591)
                      |+.|++.|.+...|..|++
T Consensus         3 C~~C~~~f~~~~~l~~H~~   21 (26)
T smart00355        3 CPECGKVFKSKSALKEHMR   21 (26)
T ss_pred             CCCCcchhCCHHHHHHHHH
Confidence            3334444444444444433

>KOG2231|consensus

Probab=96.18  E-value=0.0079  Score=62.88  Aligned_cols=116  Identities=23%  Similarity=0.599  Sum_probs=67.6

Q ss_pred             CccccchhccCCchhHHHHHHHhCCCCCCccccccccCChhhHHHHHHhhCCccccccccc---------ccccchhhHH
Q psy8499         404 NKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCS---------KEFYRKQNLT  474 (591)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~---------~~f~~~~~L~  474 (591)
                      +.|.+|++.|.-..           .+-.|..| -.|.+...|+.|+..-++. +.|.+|-         ....+...|.
T Consensus       100 ~~C~~C~~~~~~~~-----------~~~~~~~c-~~~~s~~~Lk~H~~~~H~~-~~c~lC~~~~kif~~e~k~Yt~~el~  166 (669)
T KOG2231|consen  100 HSCHICDRRFRALY-----------NKKECLHC-TEFKSVENLKNHMRDQHKL-HLCSLCLQNLKIFINERKLYTRAELN  166 (669)
T ss_pred             hhcCccccchhhhc-----------ccCCCccc-cchhHHHHHHHHHHHhhhh-hccccccccceeeeeeeehehHHHHH
Confidence            46888877664311           12368888 7777888888888554332 3444432         2223355666


Q ss_pred             HHHHhhCC-C-----CCCCccCccccCChhhHHHHHhhhCCCCCCCCcc------hhcccCchhHHHHHHhhc
Q psy8499         475 KHMKLHQG-I-----KKKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLC------SKEFSCKRSVTEHMKLHL  535 (591)
Q Consensus       475 ~H~~~h~~-~-----~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C------~~~f~~~~~l~~H~~~h~  535 (591)
                      .|+..--. .     ...|..|...|-....|.+|++.++..   |..|      +.-|..-..|..|.+.++
T Consensus       167 ~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h~~---chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  167 LHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDHEF---CHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             HHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccceeh---eeecCcccccchhcccchHHHHHhhhcC
Confidence            67653211 1     135777777777777777777765543   4444      344556666777766554

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.18  E-value=0.0022  Score=36.03  Aligned_cols=23  Identities=35%  Similarity=0.917  Sum_probs=17.5

Q ss_pred             cccCcCccccccchhHHhHhhhc
Q psy8499         566 YKCDLCTKEFSRKGRLTEHMKLH  588 (591)
Q Consensus       566 ~~C~~C~~~f~~~~~l~~H~~~H  588 (591)
                      |.|++|++.|.+...|+.|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            56788888888888888887654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.03  E-value=0.0032  Score=40.96  Aligned_cols=26  Identities=15%  Similarity=0.397  Sum_probs=12.5

Q ss_pred             ccccCcCccccccchhHHhHhhhccC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      |-.|++|+..+++..+|++|+.++|+
T Consensus        24 PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   24 PATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             -EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             CCCCCcchhhccchhhHHHHHHHHhc
Confidence            45555555555555555555555443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=96.02  E-value=0.0022  Score=59.19  Aligned_cols=24  Identities=38%  Similarity=0.845  Sum_probs=19.3

Q ss_pred             Cccccccc--ccccccchhhHHHHHH
Q psy8499         455 GITYKCNL--CSKEFYRKQNLTKHMK  478 (591)
Q Consensus       455 ~~~~~C~~--C~~~f~~~~~L~~H~~  478 (591)
                      ++||+|++  |.|+++....|+.|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~l  372 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHML  372 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhh
Confidence            57888876  8888888888888865

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=95.95  E-value=0.0044  Score=34.39  Aligned_cols=23  Identities=48%  Similarity=0.846  Sum_probs=11.1

Q ss_pred             cccccccccccchhhHHHHHHhhC
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMKLHQ  481 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~~h~  481 (591)
                      |.|+.|++... ...|..|++.|+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhC
Confidence            45555555554 555555555543

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=95.65  E-value=0.005  Score=56.88  Aligned_cols=63  Identities=25%  Similarity=0.487  Sum_probs=38.8

Q ss_pred             CCCc--chhcccCchhHHHHHHhhc-CCC---CCCCcchhhcCChhhHHHHhhhcCCcccccCcCccccccchhHHhHhh
Q psy8499         513 KCDL--CSKEFSCKRSVTEHMKLHL-GIK---NKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       513 ~C~~--C~~~f~~~~~l~~H~~~h~-~~~---~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  586 (591)
                      +|++  |+|.++....|+.|+.--+ ..+   ..=+.=-..|           .-..+||.|++|+|.++....|+-|+.
T Consensus       351 kCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F-----------~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         351 KCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIF-----------SAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             cCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccc-----------cccCCceeccccchhhccCccceeccc
Confidence            6766  7777777777777765311 111   0000001111           122468999999999999999998875

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=95.60  E-value=0.0067  Score=34.03  Aligned_cols=20  Identities=30%  Similarity=0.911  Sum_probs=9.0

Q ss_pred             ccccccccccchhhHHHHHH
Q psy8499         459 KCNLCSKEFYRKQNLTKHMK  478 (591)
Q Consensus       459 ~C~~C~~~f~~~~~L~~H~~  478 (591)
                      .|++|++.|.+...|..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            34444444444444444443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.57  E-value=0.0055  Score=35.12  Aligned_cols=22  Identities=45%  Similarity=0.898  Sum_probs=17.8

Q ss_pred             cccCcCccccccchhHHhHhhh
Q psy8499         566 YKCDLCTKEFSRKGRLTEHMKL  587 (591)
Q Consensus       566 ~~C~~C~~~f~~~~~l~~H~~~  587 (591)
                      |-|.+|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            6788888888888888888775

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=95.53  E-value=0.0091  Score=38.93  Aligned_cols=18  Identities=22%  Similarity=0.706  Sum_probs=5.6

Q ss_pred             CCcchhcccCchhHHHHH
Q psy8499         514 CDLCSKEFSCKRSVTEHM  531 (591)
Q Consensus       514 C~~C~~~f~~~~~l~~H~  531 (591)
                      |++|+..+.+..+|++|+
T Consensus        27 CP~C~a~~~~srnLrRHl   44 (54)
T PF09237_consen   27 CPICGAVIRQSRNLRRHL   44 (54)
T ss_dssp             -TTT--EESSHHHHHHHH
T ss_pred             CCcchhhccchhhHHHHH
Confidence            333333333333333333

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>KOG2231|consensus

Probab=95.43  E-value=0.031  Score=58.59  Aligned_cols=50  Identities=20%  Similarity=0.377  Sum_probs=21.9

Q ss_pred             CCCccccccCChHHHHHHHHhcCCccccc---cccccccCCHHHHHHHHHHhC
Q psy8499         351 KCDLCSKEFSCKRYVTEHMKLHQEITYKC---DLCLKEYSNKIYLTEHLKLHQ  400 (591)
Q Consensus       351 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~C---~~C~~~f~~~~~l~~H~~~h~  400 (591)
                      .|..|...|.....|..|++.+++.-.-|   +.++..|.+...|..|.+.+|
T Consensus       184 ~C~~C~~~fld~~el~rH~~~~h~~chfC~~~~~~neyy~~~~dLe~HfR~~H  236 (669)
T KOG2231|consen  184 LCKFCHERFLDDDELYRHLRFDHEFCHFCDYKTGQNEYYNDYDDLEEHFRKGH  236 (669)
T ss_pred             cchhhhhhhccHHHHHHhhccceeheeecCcccccchhcccchHHHHHhhhcC
Confidence            45555555555555555554443221112   112233444455555554444

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.00  E-value=0.018  Score=53.90  Aligned_cols=123  Identities=26%  Similarity=0.553  Sum_probs=68.1

Q ss_pred             CCccc--cccccCChhhHHHHHHhhCCccccccccc---ccc------cchhhHHHHHHhhC---CCC--CCCccCcccc
Q psy8499         431 NKCNL--CSKEFSCKSHLKEHMQVHQGITYKCNLCS---KEF------YRKQNLTKHMKLHQ---GIK--KKCDLCSKEF  494 (591)
Q Consensus       431 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~C~---~~f------~~~~~L~~H~~~h~---~~~--~~C~~C~~~f  494 (591)
                      |.|+.  |..+......|+.|.++.+++ +-|.+|-   +.|      .++..|+.|...-.   |.+  +.|..|...|
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~-~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~F  230 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF-VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIYF  230 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc-EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhcccee
Confidence            45654  566666677788887776653 4566653   223      23445555543221   212  3677777777


Q ss_pred             CChhhHHHHHhhhCCCCCCCCcchhc-------ccCchhHHHHHHhhcCCCCCCCc--c----hhhcCChhhHHHHhhh
Q psy8499         495 STKCSLTEHMKLHQGIKKKCDLCSKE-------FSCKRSVTEHMKLHLGIKNKCDL--C----SKEFSTKHTLTEHMKL  560 (591)
Q Consensus       495 ~~~~~L~~H~~~h~~~~~~C~~C~~~-------f~~~~~l~~H~~~h~~~~~~C~~--C----~~~f~~~~~l~~H~~~  560 (591)
                      -+-..|..|+|.-+.   .|-+|++.       |.+-.+|..|.+.-+   |.|.+  |    -..|.....|..|+..
T Consensus       231 YdDDEL~~HcR~~HE---~ChICD~v~p~~~QYFK~Y~~Le~HF~~~h---y~ct~qtc~~~k~~vf~~~~el~~h~~~  303 (493)
T COG5236         231 YDDDELRRHCRLRHE---ACHICDMVGPIRYQYFKSYEDLEAHFRNAH---YCCTFQTCRVGKCYVFPYHTELLEHLTR  303 (493)
T ss_pred             cChHHHHHHHHhhhh---hhhhhhccCccchhhhhCHHHHHHHhhcCc---eEEEEEEEecCcEEEeccHHHHHHHHHH
Confidence            777777777776444   46666542       555566666654321   22211  1    1356666667777644

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=94.41  E-value=0.045  Score=51.37  Aligned_cols=79  Identities=23%  Similarity=0.444  Sum_probs=40.9

Q ss_pred             cccccc--cccccCChhhHHHHHHhhCCCccccCcccc---ccC------ChhHHHHHHHHhCCC---C--Ccccccccc
Q psy8499         106 GYKCDL--CSKEYSYKHTLTEHMKLHQGIRYKCDLCSK---EFS------CKRYLTEHMKVHQGM---K--NKCVLCSKE  169 (591)
Q Consensus       106 ~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~---~f~------~~~~l~~H~~~h~~~---~--~~C~~C~~~  169 (591)
                      .|.|+.  |..+......|..|.+..++ .+-|.+|-.   .|.      +...|..|...-...   +  ..|..|...
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~-~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHG-FVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcC-cEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            356653  55555556677777765444 355666532   222      233445554321111   1  356666666


Q ss_pred             cCChhHHHHHHhhhcC
Q psy8499         170 FSSKSYLTEHMKRHQG  185 (591)
Q Consensus       170 f~~~~~l~~H~~~h~~  185 (591)
                      |-+-..|..|++..+.
T Consensus       230 FYdDDEL~~HcR~~HE  245 (493)
T COG5236         230 FYDDDELRRHCRLRHE  245 (493)
T ss_pred             ecChHHHHHHHHhhhh
Confidence            6666666666665444

>KOG2785|consensus

Probab=94.20  E-value=0.11  Score=49.95  Aligned_cols=22  Identities=27%  Similarity=0.475  Sum_probs=17.0

Q ss_pred             CccccchhccCCchhHHHHHHH
Q psy8499         404 NKCVLCSKEFSRKRRLTEHMKL  425 (591)
Q Consensus       404 ~~C~~C~~~f~~~~~l~~H~~~  425 (591)
                      +.|.-|...|.+...-+.|+++
T Consensus         4 ftC~tC~v~F~~ad~Qr~HyKS   25 (390)
T KOG2785|consen    4 FTCNTCNVEFDDADEQRAHYKS   25 (390)
T ss_pred             ceeeceeeeeccHHHHHHHhhh
Confidence            5788888888888777888754

>KOG2482|consensus

Probab=94.08  E-value=0.11  Score=48.93  Aligned_cols=64  Identities=30%  Similarity=0.511  Sum_probs=39.2

Q ss_pred             chhHHHHHHHhCCCCC--CccccccccC-ChhhHHHHHHh-hC---Cc-------------------ccccccccccccc
Q psy8499         416 KRRLTEHMKLHLGIKN--KCNLCSKEFS-CKSHLKEHMQV-HQ---GI-------------------TYKCNLCSKEFYR  469 (591)
Q Consensus       416 ~~~l~~H~~~h~~~~~--~C~~C~~~f~-~~~~l~~H~~~-h~---~~-------------------~~~C~~C~~~f~~  469 (591)
                      +..|..+++.-.+..+  +|-.|...+. .++....|+-. |.   |.                   .+.|-.|.+.|..
T Consensus       128 ~eaLeqqQ~Eredt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrd  207 (423)
T KOG2482|consen  128 KEALEQQQKEREDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRD  207 (423)
T ss_pred             HHHHHHHHHHhcCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCC
Confidence            4566777666555443  7888987765 45666777643 32   12                   2556666666666


Q ss_pred             hhhHHHHHHh
Q psy8499         470 KQNLTKHMKL  479 (591)
Q Consensus       470 ~~~L~~H~~~  479 (591)
                      +..|+.||+.
T Consensus       208 kntLkeHMrk  217 (423)
T KOG2482|consen  208 KNTLKEHMRK  217 (423)
T ss_pred             cHHHHHHHHh
Confidence            6666666654

>KOG2482|consensus

Probab=93.92  E-value=0.19  Score=47.32  Aligned_cols=74  Identities=20%  Similarity=0.361  Sum_probs=36.7

Q ss_pred             ccccccccccChHHHHHHHHHhCCCCCC--ccccccccCChHHHHHHHhhhCCceeecccCccccCCHHHHHHHHHH
Q psy8499         243 KCVLCSKEFSRKRRLTEHMKLHLGIKNK--CNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKV  317 (591)
Q Consensus       243 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~--C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~  317 (591)
                      .|-.|.....+...|..||+.-+.-...  =..=+-.|...-.+..-+|... ..-.|-.|.-.|.....|..||.-
T Consensus       281 ~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~-~~~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  281 VCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQK-KKSRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             EEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHh-hccccccccccccCcchhhhhccc
Confidence            6888888888888888888765432110  0000111222222222222111 123455555666666666666643

>KOG2785|consensus

Probab=93.83  E-value=0.2  Score=48.26  Aligned_cols=76  Identities=21%  Similarity=0.336  Sum_probs=42.2

Q ss_pred             CccccccccccChHHHHHHHHHh-CCC--C----CCccccccccCChHHHHHHHh----hhCCceeecccCccccCCHHH
Q psy8499         242 NKCVLCSKEFSRKRRLTEHMKLH-LGI--K----NKCNLCSKEFSCKSHLKEHMQ----VHQGITYKCDLCSKEFYRKQN  310 (591)
Q Consensus       242 ~~C~~C~~~f~~~~~l~~H~~~h-~~~--~----~~C~~C~~~f~~~~~L~~H~~----~h~~~~~~C~~C~~~f~~~~~  310 (591)
                      ++|..|...|.+...-+.|+++- +..  +    .-=++=-..|..+..-..=..    .-.+.++.|.+|.+.|.+...
T Consensus         4 ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~a   83 (390)
T KOG2785|consen    4 FTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPKA   83 (390)
T ss_pred             ceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChhh
Confidence            57888888888888888887642 100  0    001111122221111111100    112237889999999999888


Q ss_pred             HHHHHHH
Q psy8499         311 LTKHMKV  317 (591)
Q Consensus       311 L~~H~~~  317 (591)
                      ...|+..
T Consensus        84 ~~~hl~S   90 (390)
T KOG2785|consen   84 HENHLKS   90 (390)
T ss_pred             HHHHHHH
Confidence            8888754

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=93.75  E-value=0.022  Score=32.61  Aligned_cols=21  Identities=43%  Similarity=0.906  Sum_probs=12.6

Q ss_pred             eecccCccccCCHHHHHHHHH
Q psy8499         296 YKCDLCSKEFYRKQNLTKHMK  316 (591)
Q Consensus       296 ~~C~~C~~~f~~~~~L~~H~~  316 (591)
                      |.|..|++.|.+...|..|++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            456666666666666666653

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.86  E-value=0.061  Score=30.04  Aligned_cols=19  Identities=37%  Similarity=0.896  Sum_probs=11.2

Q ss_pred             ccCcCccccccchhHHhHhh
Q psy8499         567 KCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       567 ~C~~C~~~f~~~~~l~~H~~  586 (591)
                      .|++||+.| ..+.|..|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            466666666 4555666654

>PRK04860 hypothetical protein; Provisional

Probab=92.79  E-value=0.051  Score=46.75  Aligned_cols=36  Identities=19%  Similarity=0.683  Sum_probs=23.6

Q ss_pred             ccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFST  496 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~  496 (591)
                      +|.|. |+.   ....+.+|.++|.+.+ |+|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            56776 665   5566677777776655 677777766654

>PRK04860 hypothetical protein; Provisional

Probab=92.47  E-value=0.057  Score=46.48  Aligned_cols=38  Identities=26%  Similarity=0.691  Sum_probs=29.0

Q ss_pred             CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchh
Q psy8499         539 NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGR  580 (591)
Q Consensus       539 ~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~  580 (591)
                      |.|. |+.   ....+++|.++|++. +|.|..|+..|.....
T Consensus       120 Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~~  158 (160)
T PRK04860        120 YRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKGE  158 (160)
T ss_pred             EEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEecc
Confidence            5787 877   677788888888875 6888888888775543

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.05  E-value=0.12  Score=28.87  Aligned_cols=19  Identities=32%  Similarity=0.782  Sum_probs=9.9

Q ss_pred             CCccCccccCChhhHHHHHh
Q psy8499         486 KCDLCSKEFSTKCSLTEHMK  505 (591)
Q Consensus       486 ~C~~C~~~f~~~~~L~~H~~  505 (591)
                      .|+.||+.| ....|..|+.
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            355555555 4445555543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.35  E-value=0.11  Score=31.82  Aligned_cols=23  Identities=26%  Similarity=0.612  Sum_probs=18.2

Q ss_pred             ccccCcCccccccchhHHhHhhh
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKL  587 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~  587 (591)
                      +|.|++|+..|.....+..|++.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            57788888888888888888764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>PF01352 KRAB: KRAB box; InterPro: IPR001909 The Krueppel-associated box (KRAB) is a domain of around 75 amino acids that is found in the N-terminal part of about one third of eukaryotic Krueppel-type C2H2 zinc finger proteins (ZFPs) []

Probab=90.89  E-value=0.046  Score=34.78  Aligned_cols=14  Identities=21%  Similarity=0.427  Sum_probs=9.6

Q ss_pred             CccccccccccCCC
Q psy8499           2 ELNVEESKDHVGLS   15 (591)
Q Consensus         2 ~~~~e~~~~~~~~~   15 (591)
                      |||+|||.+++++|
T Consensus        28 dvm~Eny~~l~slG   41 (41)
T PF01352_consen   28 DVMLENYRNLVSLG   41 (41)
T ss_dssp             HHHHHTTTS---S-
T ss_pred             hHHHHhhcccEecC
Confidence            89999999999986

It is enriched in charged amino acids and can be divided into subregions A and B, which are predicted to fold into two amphipathic alpha-helices. The KRAB A and B boxes can be separated by variable spacer segments and many KRAB proteins contain only the A box []. The functions currently known for members of the KRAB-containing protein family include transcriptional repression of RNA polymerase I, II, and III promoters, binding and splicing of RNA, and control of nucleolus function. The KRAB domain functions as a transcriptional repressor when tethered to the template DNA by a DNA-binding domain. A sequence of 45 amino acids in the KRAB A subdomain has been shown to be necessary and sufficient for transcriptional repression. The B box does not repress by itself but does potentiate the repression exerted by the KRAB A subdomain [, ]. Gene silencing requires the binding of the KRAB domain to the RING-B box-coiled coil (RBCC) domain of the KAP-1/TIF1-beta corepressor. As KAP-1 binds to the heterochromatin proteins HP1, it has been proposed that the KRAB-ZFP-bound target gene could be silenced following recruitment to heterochromatin [, ]. KRAB-ZFPs probably constitute the single largest class of transcription factors within the human genome []. Although the function of KRAB-ZFPs is largely unknown, they appear to play important roles during cell differentiation and development. The KRAB domain is generally encoded by two exons. The regions coded by the two exons are known as KRAB-A and KRAB-B.; GO: 0003676 nucleic acid binding, 0006355 regulation of transcription, DNA-dependent, 0005622 intracellular; PDB: 1V65_A.

>KOG4173|consensus

Probab=90.09  E-value=0.43  Score=41.57  Aligned_cols=47  Identities=19%  Similarity=0.603  Sum_probs=33.2

Q ss_pred             ccccc--cccccCChhhHHHHHHhhCCCccccCccccccCChhHHHHHHHH
Q psy8499         107 YKCDL--CSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKV  155 (591)
Q Consensus       107 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~  155 (591)
                      +.|++  |...|.+...+..|...-++  -.|..|.+.|++...|..|+..
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~--~sCs~C~r~~Pt~hLLd~HI~E  128 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHG--NSCSFCKRAFPTGHLLDAHILE  128 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhccc--chhHHHHHhCCchhhhhHHHHH
Confidence            55664  67788877777777643333  3688888888888888888653

>KOG1146|consensus

Probab=88.77  E-value=0.13  Score=57.57  Aligned_cols=26  Identities=27%  Similarity=0.328  Sum_probs=21.5

Q ss_pred             CccccccccccccCCHHHHHHHHHHh
Q psy8499         374 EITYKCDLCLKEYSNKIYLTEHLKLH  399 (591)
Q Consensus       374 ~~~~~C~~C~~~f~~~~~l~~H~~~h  399 (591)
                      .+.|+|+.|+..|+....|..|+|..
T Consensus       463 ~kt~~cpkc~~~yk~a~~L~vhmRsk  488 (1406)
T KOG1146|consen  463 FKTLKCPKCNWHYKLAQTLGVHMRSK  488 (1406)
T ss_pred             cccccCCccchhhhhHHHhhhccccc
Confidence            46788888888888888888888873

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=88.70  E-value=0.14  Score=53.42  Aligned_cols=152  Identities=30%  Similarity=0.458  Sum_probs=84.4

Q ss_pred             CCccccccccCChhhHHHHHH--hhCC---cccccc--cccccccchhhHHHHHHhhCCCCC-CCc--cCccccCChhh-
Q psy8499         431 NKCNLCSKEFSCKSHLKEHMQ--VHQG---ITYKCN--LCSKEFYRKQNLTKHMKLHQGIKK-KCD--LCSKEFSTKCS-  499 (591)
Q Consensus       431 ~~C~~C~~~f~~~~~l~~H~~--~h~~---~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~-~C~--~C~~~f~~~~~-  499 (591)
                      +.|..|...|.....|..|.+  .|.+   +++.|+  .|++.|.....+..|...|.+... .+.  .+...+..... 
T Consensus       290 ~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (467)
T COG5048         290 IKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLNN  369 (467)
T ss_pred             CCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccCC
Confidence            455555555555555555555  4443   366666  577777777777777766666552 222  23333332222 


Q ss_pred             -----HHHHHhhhCCCCCCC--CcchhcccCchhHHHHHHhhcCCC---CCCCcchhhcCChhhHHHHhhhcCCcccccC
Q psy8499         500 -----LTEHMKLHQGIKKKC--DLCSKEFSCKRSVTEHMKLHLGIK---NKCDLCSKEFSTKHTLTEHMKLHQGIRYKCD  569 (591)
Q Consensus       500 -----L~~H~~~h~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~---~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~  569 (591)
                           +......+......+  ..|...+.....+..|...|....   +.+..|.+.|.....+..|++.|......+.
T Consensus       370 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  449 (467)
T COG5048         370 EPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLLC  449 (467)
T ss_pred             CCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCceee
Confidence                 111111111211122  226667777777777777776544   3678888888888888888888876643343


Q ss_pred             cCccccccchhHH
Q psy8499         570 LCTKEFSRKGRLT  582 (591)
Q Consensus       570 ~C~~~f~~~~~l~  582 (591)
                      .+-+.|.....+.
T Consensus       450 ~~~~~~~~~~~~~  462 (467)
T COG5048         450 SILKSFRRDLDLS  462 (467)
T ss_pred             ccccccchhhhhh
Confidence            4444444433333

>smart00451 ZnF_U1 U1-like zinc finger

Probab=88.56  E-value=0.27  Score=30.06  Aligned_cols=22  Identities=27%  Similarity=0.714  Sum_probs=13.3

Q ss_pred             ccccccccccccchhhHHHHHH
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMK  478 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~  478 (591)
                      +|.|++|++.|.+...+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            3556666666666666666653

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=87.59  E-value=0.21  Score=44.44  Aligned_cols=47  Identities=30%  Similarity=0.723  Sum_probs=28.6

Q ss_pred             CCccccccccCChhhHHHHHHhhCCcccccccccccccchhhHHHH-HHhh
Q psy8499         431 NKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKH-MKLH  480 (591)
Q Consensus       431 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H-~~~h  480 (591)
                      .-|.+|++.|.....|..|++.   +-|+|.+|.|...+--.|..| |.+|
T Consensus        11 pwcwycnrefddekiliqhqka---khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   11 PWCWYCNREFDDEKILIQHQKA---KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             ceeeecccccchhhhhhhhhhh---ccceeeeehhhhccCCCceeehhhhh
Confidence            3466666666666666666554   336677777766666666665 3343

>KOG2893|consensus

Probab=87.14  E-value=0.19  Score=44.64  Aligned_cols=42  Identities=31%  Similarity=0.631  Sum_probs=23.9

Q ss_pred             ccccccccccChHHHHHHHHHhCCCCCCccccccccCChHHHHHH
Q psy8499         243 KCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEH  287 (591)
Q Consensus       243 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H  287 (591)
                      -|.+|++.|....-|..|++..+   ++|.+|.+...+--.|..|
T Consensus        12 wcwycnrefddekiliqhqkakh---fkchichkkl~sgpglsih   53 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAKH---FKCHICHKKLFSGPGLSIH   53 (341)
T ss_pred             eeeecccccchhhhhhhhhhhcc---ceeeeehhhhccCCCceee
Confidence            46666666666666666654322   5566666655555555555

>KOG1146|consensus

Probab=86.54  E-value=0.19  Score=56.34  Aligned_cols=24  Identities=25%  Similarity=0.585  Sum_probs=17.7

Q ss_pred             cccccCcCccccccchhHHhHhhh
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKL  587 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~  587 (591)
                      ++|.|..|+.+++++.+|..|+..
T Consensus       517 ~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  517 KPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             CcccceeeeeeeecchHHHHHHHH
Confidence            467777777777777777777653

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=85.05  E-value=0.2  Score=52.10  Aligned_cols=55  Identities=29%  Similarity=0.583  Sum_probs=37.3

Q ss_pred             CccccccccccccCChhhHHHHHHhhCCC-ccccCc--cccccCChhHHHHHHHHhCC
Q psy8499         104 DIGYKCDLCSKEYSYKHTLTEHMKLHQGI-RYKCDL--CSKEFSCKRYLTEHMKVHQG  158 (591)
Q Consensus       104 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~--C~~~f~~~~~l~~H~~~h~~  158 (591)
                      ...+.|+.|...|........|...+.+. ++.|..  |...+.....+..|...+..
T Consensus        31 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   88 (467)
T COG5048          31 PRPDSCPNCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHHN   88 (467)
T ss_pred             CchhhcccccccccccchhhhhcccccccCCccccccccccccCCcchhhhhcccccc
Confidence            34567888888888888888887777664 566654  44566666666666665543

>TIGR00622 ssl1 transcription factor ssl1

Probab=82.62  E-value=1.6  Score=34.74  Aligned_cols=34  Identities=21%  Similarity=0.560  Sum_probs=21.6

Q ss_pred             cccccccccccCChhhHHHHHHhhCCCccccCccccccCChhHHHHH
Q psy8499         106 GYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEH  152 (591)
Q Consensus       106 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H  152 (591)
                      +|.|+.|+...-             ..|..|++|+-...+...|.+-
T Consensus         1 GY~CPrC~skvC-------------~LP~~CpiCgLtLVss~HLARS   34 (112)
T TIGR00622         1 GYFCPQCRAKVC-------------ELPVECPICGLTLILSTHLARS   34 (112)
T ss_pred             CccCCCCCCCcc-------------CCCCcCCcCCCEEeccchHHHh
Confidence            367777764432             2367788888777666666543

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG4173|consensus

Probab=80.66  E-value=0.89  Score=39.72  Aligned_cols=45  Identities=24%  Similarity=0.663  Sum_probs=21.7

Q ss_pred             ccccc--ccccccchhhHHHHHHhhCCCCCCCccCccccCChhhHHHHH
Q psy8499         458 YKCNL--CSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHM  504 (591)
Q Consensus       458 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~  504 (591)
                      |.|++  |...|........|-.+-++.  .|..|.+.|.+...|..|+
T Consensus        80 ~~cqvagc~~~~d~lD~~E~hY~~~h~~--sCs~C~r~~Pt~hLLd~HI  126 (253)
T KOG4173|consen   80 FACQVAGCCQVFDALDDYEHHYHTLHGN--SCSFCKRAFPTGHLLDAHI  126 (253)
T ss_pred             ccccccchHHHHhhhhhHHHhhhhcccc--hhHHHHHhCCchhhhhHHH
Confidence            45544  445555554444443322221  3555555555555555554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	591
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		4e-26
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		7e-23
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		2e-09
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		6e-08
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-09
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		5e-09
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		6e-09
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-07
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		2e-07
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-09
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		7e-09
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-07
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		8e-09
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-08
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-09
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		7e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-08
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		4e-08
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		6e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-08
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		4e-08
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		1e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		6e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		4e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-08
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		7e-08
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-07
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		6e-08
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		1e-06
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		2e-05
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		2e-07
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		5e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		2e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		7e-04
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		7e-07
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		5e-04
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-06
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		5e-05
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		8e-04
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-06
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		9e-05
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-06
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		9e-05
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		1e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		3e-05
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		3e-04
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		3e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		3e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		4e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		7e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-04
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		5e-04
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		5e-04
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		5e-04
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		6e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  116 bits (290), Expect = 4e-26,   Method: Compositional matrix adjust.
 Identities = 73/187 (39%), Positives = 90/187 (48%), Gaps = 5/187 (2%)
Query: 169 EFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNK 227
           EF S S + +         Y C  C K FS   +L EH + H  E  YKC  C K +S+K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62
Query: 228 IYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLK 285
             LT H + H G K  KC  C K FS++  L  H + H G K   C  C K FS  +HL+
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122
Query: 286 EHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMK 343
            H + H G   YKC  C K F R+ NL  H + H G K  KC  C K FS +  L  H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182
Query: 344 LHQGIKN 350
            H G K 
Sbjct: 183 THTGKKT 189

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  105 bits (262), Expect = 7e-23,   Method: Compositional matrix adjust.
 Identities = 66/163 (40%), Positives = 81/163 (49%), Gaps = 5/163 (3%)
Query: 433 CNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLC 490
           C  C K FS   HL EH + H G   YKC  C K F  K++LT+H + H G K  KC  C
Sbjct: 24  CPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPEC 83
Query: 491 SKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEF 548
            K FS + +L  H + H G K   C  C K FS    +  H + H G K  KC  C K F
Sbjct: 84  GKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSF 143
Query: 549 STKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
           S +  L  H + H G + YKC  C K FSR+  L  H + H G
Sbjct: 144 SREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTG 186

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 44/71 (61%), Gaps = 2/71 (2%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGI-TYKCNLCSKE 466
           C K F+ K +   HM +HLG++   C +C K+F  K HL  HM++H GI  Y+CN+C+K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 467 FYRKQNLTKHM 477
           F  + +  +H+
Sbjct: 75  FMWRDSFHRHV 85

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 2/71 (2%)
Query: 517 CSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKE 574
           C K F+ K     HM +HLG++   C +C K+F  KH L  HMK+H GI+ Y+C++C K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74
Query: 575 FSRKGRLTEHM 585
           F  +     H+
Sbjct: 75  FMWRDSFHRHV 85

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDL 300
           KC  C K FS+   L +H + H G K  KC  C K FS  S L++H + H G   YKC  
Sbjct: 6   KCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCPE 65
Query: 301 CSKEFYRKQNLTKHMKVHQGMK 322
           C K F R  +L++H + HQ  K
Sbjct: 66  CGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 59.7 bits (143), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 34/81 (41%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 295 TYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KC 352
            YKC  C K F +  NL KH + H G K  KC  C K FS  S L +H + H G K  KC
Sbjct: 4   PYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKC 63
Query: 353 DLCSKEFSCKRYVTEHMKLHQ 373
             C K FS   +++ H + HQ
Sbjct: 64  PECGKSFSRSDHLSRHQRTHQ 84

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 59.3 bits (142), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 44/82 (53%), Gaps = 2/82 (2%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNL 462
           KC  C K FS+   L +H + H G K  KC  C K FS  S L++H + H G   YKC  
Sbjct: 6   KCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCPE 65
Query: 463 CSKEFYRKQNLTKHMKLHQGIK 484
           C K F R  +L++H + HQ  K
Sbjct: 66  CGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 33/84 (39%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Query: 457 TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KC 514
            YKC  C K F +  NL KH + H G K  KC  C K FS    L +H + H G K  KC
Sbjct: 4   PYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKC 63
Query: 515 DLCSKEFSCKRSVTEHMKLHLGIK 538
             C K FS    ++ H + H   K
Sbjct: 64  PECGKSFSRSDHLSRHQRTHQNKK 87

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/78 (39%), Positives = 40/78 (51%), Gaps = 2/78 (2%)
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL 570
           KC  C K FS   ++ +H + H G K  KC  C K FS    L +H + H G + YKC  
Sbjct: 6   KCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCPE 65
Query: 571 CTKEFSRKGRLTEHMKLH 588
           C K FSR   L+ H + H
Sbjct: 66  CGKSFSRSDHLSRHQRTH 83

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 29/74 (39%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 490 CSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKE 547
           C + FS K +L  H+++H G K  +C +C + FS + S+  H++ H G K   CD+C ++
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRK 71
Query: 548 FSTKHTLTEHMKLH 561
           F+T HT T H K+H
Sbjct: 72  FATLHTRTRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 58.9 bits (141), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKE 304
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H G   + CD+C ++
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 305 FYRKQNLTKHMKVHQGMKN 323
           F R     +H K+H   K+
Sbjct: 72  FARSDERKRHTKIHLRQKD 90

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKE 466
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H G   + C++C ++
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 467 FYRKQNLTKHMKLH 480
           F R     +H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 457 TYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK- 512
            Y C +  C + F R   LT+H+++H G K  +C +C + FS    LT H++ H G K  
Sbjct: 4   PYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKN 539
            CD+C ++F+       H K+HL  K+
Sbjct: 64  ACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 517 CSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKE 574
           C + FS    +T H+++H G K  +C +C + FS    LT H++ H G + + CD+C ++
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 575 FSRKGRLTEHMKLHL 589
           F+R      H K+HL
Sbjct: 72  FARSDERKRHTKIHL 86

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKE 304
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H G   + CD+C ++
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 305 FYRKQNLTKHMKVHQGMKN 323
           F R     +H K+H   K+
Sbjct: 72  FARSDERKRHTKIHLRQKD 90

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKE 466
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H G   + C++C ++
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 467 FYRKQNLTKHMKLH 480
           F R     +H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 457 TYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK- 512
            Y C +  C + F R   LT+H+++H G K  +C +C + FS    LT H++ H G K  
Sbjct: 4   PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKN 539
            CD+C ++F+       H K+HL  K+
Sbjct: 64  ACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 52.8 bits (125), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 517 CSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKE 574
           C + FS    +T H+++H G K  +C +C + FS    LT H++ H G + + CD+C ++
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 575 FSRKGRLTEHMKLHL 589
           F+R      H K+HL
Sbjct: 72  FARSDERKRHTKIHL 86

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 58.9 bits (141), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKE 304
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H G   + CD+C ++
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 305 FYRKQNLTKHMKVHQGMKN 323
           F R     +H K+H   K+
Sbjct: 72  FARSDERKRHTKIHLRQKD 90

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)
Query: 295 TYKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN- 350
            Y C +  C + F R  +LT+H+++H G K  +C +C + FS   +LT H++ H G K  
Sbjct: 4   PYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 351 KCDLCSKEFSCKRYVTEHMKLH 372
            CD+C ++F+       H K+H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 56.6 bits (135), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKE 466
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H G   + C++C ++
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 467 FYRKQNLTKHMKLH 480
           F R     +H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 4/87 (4%)
Query: 457 TYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK- 512
            Y C +  C + F R  +LT+H+++H G K  +C +C + FS    LT H++ H G K  
Sbjct: 4   PYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKN 539
            CD+C ++F+       H K+HL  K+
Sbjct: 64  ACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 517 CSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKE 574
           C + FS    +T H+++H G K  +C +C + FS    LT H++ H G + + CD+C ++
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 575 FSRKGRLTEHMKLHL 589
           F+R      H K+HL
Sbjct: 72  FARSDERKRHTKIHL 86

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKE 304
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H G   + CD+C ++
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 70
Query: 305 FYRKQNLTKHMKVH 318
           F R     +H K+H
Sbjct: 71  FARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKE 466
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H G   + C++C ++
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 70
Query: 467 FYRKQNLTKHMKLH 480
           F R     +H K+H
Sbjct: 71  FARSDERKRHTKIH 84

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 457 TYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK- 512
            Y C +  C + F R   LT+H+++H G K  +C +C + FS    LT H++ H G K  
Sbjct: 3   PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 62
Query: 513 KCDLCSKEFSCKRSVTEHMKLHL 535
            CD+C ++F+       H K+HL
Sbjct: 63  ACDICGRKFARSDERKRHTKIHL 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 517 CSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKE 574
           C + FS    +T H+++H G K  +C +C + FS    LT H++ H G + + CD+C ++
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 70
Query: 575 FSRKGRLTEHMKLHL 589
           F+R      H K+HL
Sbjct: 71  FARSDERKRHTKIHL 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 58.5 bits (140), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKE 304
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H G   + CD+C ++
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 305 FYRKQNLTKHMKVH 318
           F R     +H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 26/74 (35%), Positives = 42/74 (56%), Gaps = 2/74 (2%)
Query: 409 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKE 466
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H G   + C++C ++
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 467 FYRKQNLTKHMKLH 480
           F R     +H K+H
Sbjct: 72  FARSDERKRHTKIH 85

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 54.7 bits (130), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/83 (34%), Positives = 45/83 (54%), Gaps = 4/83 (4%)
Query: 457 TYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK- 512
            Y C +  C + F R   LT+H+++H G K  +C +C + FS    LT H++ H G K  
Sbjct: 4   PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 513 KCDLCSKEFSCKRSVTEHMKLHL 535
            CD+C ++F+       H K+HL
Sbjct: 64  ACDICGRKFARSDERKRHTKIHL 86

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 52.8 bits (125), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 2/75 (2%)
Query: 517 CSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKE 574
           C + FS    +T H+++H G K  +C +C + FS    LT H++ H G + + CD+C ++
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 575 FSRKGRLTEHMKLHL 589
           F+R      H K+HL
Sbjct: 72  FARSDERKRHTKIHL 86

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 56.2 bits (134), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKE 304
           C + FS+   LT H+++H G K  +C +C + FS   HL  H++ H G   + CD+C ++
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 305 FYRKQNLTKHMKVHQGMKN 323
           F R     +H K+H   K+
Sbjct: 72  FARSDERKRHTKIHLRQKD 90

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 517 CSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKE 574
           C + FS   S+T H+++H G K  +C +C + FS    LT H++ H G + + CD+C ++
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 575 FSRKGRLTEHMKLHL 589
           F+R      H K+HL
Sbjct: 72  FARSDERKRHTKIHL 86

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 56.2 bits (134), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/79 (34%), Positives = 43/79 (54%), Gaps = 2/79 (2%)
Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKE 304
           C + FS    LT H+++H G K  +C +C + FS   HL  H++ H G   + CD+C ++
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 305 FYRKQNLTKHMKVHQGMKN 323
           F R     +H K+H   K+
Sbjct: 72  FARSDERKRHTKIHLRQKD 90

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 55.5 bits (132), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 28/82 (34%), Positives = 45/82 (54%), Gaps = 4/82 (4%)
Query: 295 TYKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN- 350
            Y C +  C + F    NLT+H+++H G K  +C +C + FS   +LT H++ H G K  
Sbjct: 4   PYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 351 KCDLCSKEFSCKRYVTEHMKLH 372
            CD+C ++F+       H K+H
Sbjct: 64  ACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 457 TYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK- 512
            Y C +  C + F    NLT+H+++H G K  +C +C + FS    LT H++ H G K  
Sbjct: 4   PYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPF 63
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKN 539
            CD+C ++F+       H K+HL  K+
Sbjct: 64  ACDICGRKFARSDERKRHTKIHLRQKD 90

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 53.5 bits (127), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 44/75 (58%), Gaps = 2/75 (2%)
Query: 517 CSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKE 574
           C + FS   ++T H+++H G K  +C +C + FS    LT H++ H G + + CD+C ++
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71
Query: 575 FSRKGRLTEHMKLHL 589
           F+R      H K+HL
Sbjct: 72  FARSDERKRHTKIHL 86

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 55.8 bits (133), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 27/74 (36%), Positives = 44/74 (59%), Gaps = 2/74 (2%)
Query: 490 CSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKE 547
           C + FS K +L  H+++H G K  +C +C + FS    + +H++ H G K   CD+C ++
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRK 71
Query: 548 FSTKHTLTEHMKLH 561
           F+T HT   H K+H
Sbjct: 72  FATLHTRDRHTKIH 85

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDL 219
           KC +C K FS K  L  HM+ H G+K YKC  C    +  S L +H+++H  E  +KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 220 CLKEYSNKIYLTEHLKLHQG 239
           C     N   LT HL+ H G
Sbjct: 70  CPYASRNSSQLTVHLRSHTG 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDL 300
           KC +C K FSRK +L  HM+ H G+K  KC  C    +  S L +H+++H     +KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 301 CSKEFYRKQNLTKHMKVHQG 320
           C         LT H++ H G
Sbjct: 70  CPYASRNSSQLTVHLRSHTG 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 51.2 bits (121), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 2/80 (2%)
Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNL 462
           KC +C K FSRK +L  HM+ H G+K  KC  C    +  S L +H+++H     +KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 463 CSKEFYRKQNLTKHMKLHQG 482
           C         LT H++ H G
Sbjct: 70  CPYASRNSSQLTVHLRSHTG 89

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)
Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL 570
           KC++C K FS K  +  HM+ H G+K  KC  C    +   +L +H+++H   R +KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69
Query: 571 CTKEFSRKGRLTEHMKLHLG 590
           C        +LT H++ H G
Sbjct: 70  CPYASRNSSQLTVHLRSHTG 89

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 43/77 (55%), Gaps = 4/77 (5%)
Query: 274 CSKEFSCKSHLKEHMQVHQG-ITYKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KCVLCS 329
           C+K ++  SHLK H++ H G   YKC    C   F R   LT+H + H G K  +C +C+
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 330 KEFSSKSYLTEHMKLHQ 346
           + FS   +L  HMK HQ
Sbjct: 83  RSFSRSDHLALHMKRHQ 99

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 31/77 (40%), Positives = 42/77 (54%), Gaps = 4/77 (5%)
Query: 436 CSKEFSCKSHLKEHMQVHQG-ITYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCS 491
           C+K ++  SHLK H++ H G   YKC    C   F R   LT+H + H G K  +C +C+
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 492 KEFSTKCSLTEHMKLHQ 508
           + FS    L  HMK HQ
Sbjct: 83  RSFSRSDHLALHMKRHQ 99

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 54.3 bits (129), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 40/112 (35%), Positives = 63/112 (56%), Gaps = 7/112 (6%)
Query: 378 KCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKNK---- 432
           +C  C K++ +K YL  H + H G K  +C  C K + RK  L EH   +   +++    
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 433 CNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHM-KLHQG 482
           C++C + F  +  L+ HM  H G + YKC+ CS++F +K++L  HM KLH G
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 42.4 bits (98), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 37/112 (33%), Positives = 57/112 (50%), Gaps = 7/112 (6%)
Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKNK---- 540
           +C  C K+F +K  L  H + H G K  +C  C K +  K ++ EH   +   +++    
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68
Query: 541 CDLCSKEFSTKHTLTEHMKLHQG-IRYKCDLCTKEFSRKGRLTEHM-KLHLG 590
           C +C + F  +  L  HM  H G + YKC  C+++F +K  L  HM KLH G
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 53.9 bits (128), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 30/79 (37%), Positives = 41/79 (51%), Gaps = 2/79 (2%)
Query: 271 CNLCSKEFSCKSHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLC 328
           C +C K F   S L  H+ +H     Y C  C K F++K ++ KH  +H G K +KC +C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 329 SKEFSSKSYLTEHMKLHQG 347
            K FS  S L  H + H G
Sbjct: 64  GKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 52.4 bits (124), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 40/79 (50%), Gaps = 2/79 (2%)
Query: 433 CNLCSKEFSCKSHLKEHMQVHQGI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLC 490
           C +C K F   S L  H+ +H     Y C  C K F++K ++ KH  +H G K  KC +C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 491 SKEFSTKCSLTEHMKLHQG 509
            K FS   +L  H + H G
Sbjct: 64  GKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 24/79 (30%), Positives = 39/79 (49%), Gaps = 2/79 (2%)
Query: 514 CDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLC 571
           C +C K F    +++ H+ +H   +   C  C K F  K  + +H  +H G + +KC +C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 572 TKEFSRKGRLTEHMKLHLG 590
            K FS+   L  H + H G
Sbjct: 64  GKAFSQSSNLITHSRKHTG 82

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 36/106 (33%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 382 CLKEYSNKIYLTEHLKLHQGIKN-KCVL--CSKEFSRKRRLTEHMKLHLGIKN-KCNLCS 437
           C K Y    +L  H + H G K  +C    C + FSR  +L  H + H G+K  +C  C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73
Query: 438 KEFSCKSHLKEHMQVHQG-ITYKCNL--CSKEFYRKQNLTKHMKLH 480
           ++FS   HLK H + H G   + C    C K+F R   L +H  +H
Sbjct: 74  RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 46.2 bits (108), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 51/106 (48%), Gaps = 7/106 (6%)
Query: 436 CSKEFSCKSHLKEHMQVHQG-ITYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCS 491
           C+K +   SHL+ H + H G   Y+C+   C + F R   L +H + H G+K  +C  C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73
Query: 492 KEFSTKCSLTEHMKLHQGIKK---KCDLCSKEFSCKRSVTEHMKLH 534
           ++FS    L  H + H G K    +   C K+F+    +  H  +H
Sbjct: 74  RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 42.4 bits (98), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 32/106 (30%), Positives = 49/106 (46%), Gaps = 7/106 (6%)
Query: 490 CSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFSCKRSVTEHMKLHLGIKN-KCDLCS 545
           C+K +     L  H + H G K  +CD   C + FS    +  H + H G+K  +C  C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73
Query: 546 KEFSTKHTLTEHMKLHQGIR-YKCDL--CTKEFSRKGRLTEHMKLH 588
           ++FS    L  H + H G + + C    C K+F+R   L  H  +H
Sbjct: 74  RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 274 CSKEFSCKSHLKEHMQVHQG-ITYKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KCVLCS 329
           C K ++  SHLK H++ H G   Y CD   C  +F R   LT+H + H G +  +C  C 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 330 KEFSSKSYLTEHMKLH 345
           + FS   +L  HMK H
Sbjct: 74  RAFSRSDHLALHMKRH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 436 CSKEFSCKSHLKEHMQVHQG-ITYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCS 491
           C K ++  SHLK H++ H G   Y C+   C  +F R   LT+H + H G +  +C  C 
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 492 KEFSTKCSLTEHMKLH 507
           + FS    L  HMK H
Sbjct: 74  RAFSRSDHLALHMKRH 89

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 49.7 bits (117), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 29/76 (38%), Positives = 40/76 (52%), Gaps = 4/76 (5%)
Query: 274 CSKEFSCKSHLKEHMQVHQG-ITYKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KCVLCS 329
           C K ++  SHLK H++ H G   Y CD   C  +F R   LT+H + H G +  +C  C 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 330 KEFSSKSYLTEHMKLH 345
           + FS   +L  HMK H
Sbjct: 73  RAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 45.4 bits (106), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 28/76 (36%), Positives = 39/76 (51%), Gaps = 4/76 (5%)
Query: 436 CSKEFSCKSHLKEHMQVHQG-ITYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCS 491
           C K ++  SHLK H++ H G   Y C+   C  +F R   LT+H + H G +  +C  C 
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 492 KEFSTKCSLTEHMKLH 507
           + FS    L  HMK H
Sbjct: 73  RAFSRSDHLALHMKRH 88

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 48.1 bits (113), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 32/110 (29%), Positives = 52/110 (47%), Gaps = 6/110 (5%)
Query: 436 CSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDL--CSK 492
           C+K F   S +++H+  H    + C  C K F     L +H  +H G K  +C    C K
Sbjct: 13  CTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGK 72
Query: 493 EFSTKCSLTEHMKLHQGIKK---KCDLCSKEFSCKRSVTEHMKLHLGIKN 539
            FS   +L  H+++H G +      D C+K+F+   ++  H+  H   KN
Sbjct: 73  RFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKN 122

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 22/55 (40%), Positives = 29/55 (52%), Gaps = 1/55 (1%)
Query: 432 KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK 485
           KC+ C   F  K +L  H  VH G   Y+CN+C  +F R  NL  H ++H G K 
Sbjct: 19  KCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKP 73

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 19/52 (36%), Positives = 28/52 (53%), Gaps = 1/52 (1%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
           KCD C   F  K  L  H  +H G + Y+C++C  +F+R   L  H ++H G
Sbjct: 19  KCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSG 70

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 217 CDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKNK---CN 272
           C++C K + +  +L  H   H G K   C +C   F RK R++ H++ H G   K   C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 273 LCSKEFSCKSHLKEHM-QVHQGIT 295
            C K FS   HL  H+ QVH G +
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHSGPS 93

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 47.0 bits (110), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 5/84 (5%)
Query: 379 CDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKNK---CN 434
           C++C K + +  +L  H   H G K   C +C   F RK R++ H++ H G   K   C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 435 LCSKEFSCKSHLKEHM-QVHQGIT 457
            C K FS   HL  H+ QVH G +
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHSGPS 93

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 43.1 bits (100), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 29/82 (35%), Positives = 37/82 (45%), Gaps = 5/82 (6%)
Query: 433 CNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKKK---CD 488
           C +C K F    HL  H   H G   Y C +C   F RK  ++ H++ H G   K   C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 489 LCSKEFSTKCSLTEHMK-LHQG 509
            C K FS    L  H+K +H G
Sbjct: 70  SCGKGFSRPDHLNGHIKQVHSG 91

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 46.6 bits (109), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 32/53 (60%), Gaps = 1/53 (1%)
Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQG 158
           YKCD C K +S+   L++H + H G + YKCD C K F  + +L  H +VH G
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 45.8 bits (107), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 23/53 (43%), Positives = 30/53 (56%), Gaps = 1/53 (1%)
Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQG 347
           YKCD C K F    +L+KH + H G K  KC  C K F  +S+L  H ++H G
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 43.5 bits (101), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 29/53 (54%), Gaps = 1/53 (1%)
Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQG 509
           YKC+ C K F    +L+KH + H G K  KCD C K F  +  L  H ++H G
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 42.7 bits (99), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
           KCD C K FS    L++H + H G + YKCD C K F ++  L  H ++H G
Sbjct: 20  KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG 71

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 22/52 (42%), Positives = 27/52 (51%), Gaps = 1/52 (1%)
Query: 295 TYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLH 345
            Y C  C K F R   L +H +VH G K  KC+ C K FS  S L  H ++H
Sbjct: 14  PYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 19/54 (35%), Positives = 31/54 (57%), Gaps = 3/54 (5%)
Query: 295 TYKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLH 345
            Y C +  C + F R   LT+H+++H G K  +C +C + FS   +LT H++ H
Sbjct: 19  PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 42.7 bits (99), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 63/142 (44%), Gaps = 14/142 (9%)
Query: 112 CSKEYSYKHTLTEHMKLHQGIR-YKC--DLCSKEFSCKRYLTEHMKVHQGMKN---KCVL 165
           C   Y+    L  H+  H G + + C  + C K F+   +LT H   H G KN       
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79
Query: 166 CSKEFSSKSYLTEHMKRHQGIK---YKCNL--CSKEFSSKSYLTEHMKLH-QEITYKC-- 217
           C   F++K+ + +H  R   IK   Y C+   C K F   + L  H   H Q++ Y+C  
Sbjct: 80  CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH 139
Query: 218 DLCLKEYSNKIYLTEHLKLHQG 239
           + C K +S    L  H K+H G
Sbjct: 140 EGCDKRFSLPSRLKRHEKVHAG 161

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	591
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-32
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-31
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-29
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-28
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-28
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-26
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-24
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-24
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-22
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-22
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	2e-21
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-20
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	8e-18
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	4e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-20
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-19
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-19
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-18
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-18
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-18
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-16
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	4e-11
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-19
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-16
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-16
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-16
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	8e-16
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-14
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-09
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-19
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-17
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	9e-15
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-06
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-17
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-17
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-16
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	4e-12
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-12
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-17
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	3e-16
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-15
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-15
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	6e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-12
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-10
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-17
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	8e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	5e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-11
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	8e-16
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-14
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-14
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-12
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-09
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-09
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-16
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	9e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-10
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-09
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	5e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-15
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-14
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-12
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-11
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-11
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-11
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-09
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-05
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	5e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-14
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-13
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-10
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-08
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-15
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-14
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	4e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-10
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-12
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-08
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-08
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-07
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-06
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-11
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	5e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	6e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	8e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-08
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-05
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-12
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	4e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	8e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-07
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-04
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-11
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	3e-10
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-10
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	9e-11
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	5e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-10
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	1e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-10
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	7e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-07
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	3e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-05
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	8e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-06
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-04
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-10
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	5e-08
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	1e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	3e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	5e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	6e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	8e-08
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	3e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-05
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	8e-07
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-06
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-05
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	5e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-08
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	8e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-07
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	7e-06
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-05
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-07
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-06
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	1e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	3e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	5e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	8e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	9e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	9e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	8e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	5e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	8e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	6e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	9e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	6e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	7e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  122 bits (308), Expect = 3e-32
 Identities = 72/186 (38%), Positives = 87/186 (46%), Gaps = 6/186 (3%)

Query: 170 FSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNK 227
               S          G K Y C  C K FS   +L EH + H  E  YKC  C K +S+K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 228 IYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLK 285
             LT H + H G K  KC  C K FS++  L  H + H G K   C  C K FS  +HL+
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 286 EHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMK 343
            H + H G   YKC  C K F R+ NL  H + H G K  KC  C K FS +  L  H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

Query: 344 LHQGIK 349
            H G K
Sbjct: 183 THTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  120 bits (303), Expect = 1e-31
 Identities = 69/186 (37%), Positives = 83/186 (44%), Gaps = 6/186 (3%)

Query: 143 FSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSK 200
                       +  G K   C  C K FS   +L EH + H G K YKC  C K FS K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 201 SYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLT 258
             LT H + H  E  YKC  C K +S +  L  H + H G K   C  C K FS+   L 
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 259 EHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLTKHMK 316
            H + H G K  KC  C K FS + +L  H + H G   YKC  C K F R+  L  H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

Query: 317 VHQGMK 322
            H G K
Sbjct: 183 THTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  117 bits (295), Expect = 2e-30
 Identities = 69/184 (37%), Positives = 84/184 (45%), Gaps = 6/184 (3%)

Query: 413 FSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRK 470
                       L  G K   C  C K FS   HL EH + H G   YKC  C K F  K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 471 QNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVT 528
           ++LT+H + H G K  KC  C K FS + +L  H + H G K   C  C K FS    + 
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMK 586
            H + H G K  KC  C K FS +  L  H + H G + YKC  C K FSR+  L  H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

Query: 587 LHLG 590
            H G
Sbjct: 183 THTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  116 bits (293), Expect = 3e-30
 Identities = 70/183 (38%), Positives = 85/183 (46%), Gaps = 6/183 (3%)

Query: 117 SYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKS 174
               +      L  G + Y C  C K FS   +L EH + H G K  KC  C K FS K 
Sbjct: 4   FGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKK 63

Query: 175 YLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTE 232
            LT H + H G K YKC  C K FS ++ L  H + H  E  Y C  C K +S   +L  
Sbjct: 64  DLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRA 123

Query: 233 HLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQV 290
           H + H G K  KC  C K FSR+  L  H + H G K  KC  C K FS +  L  H + 
Sbjct: 124 HQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRT 183

Query: 291 HQG 293
           H G
Sbjct: 184 HTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  112 bits (282), Expect = 8e-29
 Identities = 67/186 (36%), Positives = 85/186 (45%), Gaps = 6/186 (3%)

Query: 305 FYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCK 362
            +   +      +  G K   C  C K FS   +L EH + H G K  KC  C K FS K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 363 RYVTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLT 420
           + +T H + H  E  YKC  C K +S +  L  H + H G K   C  C K FS+   L 
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 421 EHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMK 478
            H + H G K  KC  C K FS + +L  H + H G   YKC  C K F R+  L  H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

Query: 479 LHQGIK 484
            H G K
Sbjct: 183 THTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  111 bits (280), Expect = 2e-28
 Identities = 71/186 (38%), Positives = 88/186 (47%), Gaps = 6/186 (3%)

Query: 332 FSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNK 389
               S       L  G K   C  C K FS   ++ EH + H  E  YKC  C K +S+K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 390 IYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLK 447
             LT H + H G K  KC  C K FS++  L  H + H G K   C  C K FS  +HL+
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 448 EHMQVHQGI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMK 505
            H + H G   YKC  C K F R+ NL  H + H G K  KC  C K FS + +L  H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

Query: 506 LHQGIK 511
            H G K
Sbjct: 183 THTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  109 bits (275), Expect = 7e-28
 Identities = 68/167 (40%), Positives = 84/167 (50%), Gaps = 5/167 (2%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCV 164
           Y C  C K +S    L EH + H G + YKC  C K FS K+ LT H + H G K  KC 
Sbjct: 22  YACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP 81

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLK 222
            C K FS ++ L  H + H G K Y C  C K FS  ++L  H + H  E  YKC  C K
Sbjct: 82  ECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGK 141

Query: 223 EYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK 268
            +S +  L  H + H G K  KC  C K FSR+  L  H + H G K
Sbjct: 142 SFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKK 188

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  103 bits (260), Expect = 8e-26
 Identities = 67/186 (36%), Positives = 87/186 (46%), Gaps = 6/186 (3%)

Query: 359 FSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRK 416
                       L   E  Y C  C K +S   +L EH + H G K  KC  C K FS K
Sbjct: 3   EFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDK 62

Query: 417 RRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLT 474
           + LT H + H G K  KC  C K FS +++L+ H + H G   Y C  C K F +  +L 
Sbjct: 63  KDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLR 122

Query: 475 KHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMK 532
            H + H G K  KC  C K FS + +L  H + H G K  KC  C K FS + ++  H +
Sbjct: 123 AHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQR 182

Query: 533 LHLGIK 538
            H G K
Sbjct: 183 THTGKK 188

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 99.2 bits (248), Expect = 3e-24
 Identities = 54/202 (26%), Positives = 75/202 (37%), Gaps = 41/202 (20%)

Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIR-YKCD--LCSKEFSCKRYLTEHMKVHQGMKN 161
           Y C    C   Y+    L  H+  H G + + C    C K F+   +LT H   H G KN
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72

Query: 162 -KC--VLCSKEFSSKSYLTEHMKRHQGIK---YKCNL--CSKEFSSKSYLTEHMKLH-QE 212
             C    C   F++K+ + +H  R   IK   Y C+   C K F   + L  H   H Q+
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132

Query: 213 ITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKN-KC 271
           + Y+C                             C K FS   RL  H K+H G    K 
Sbjct: 133 LPYEC-------------------------PHEGCDKRFSLPSRLKRHEKVHAGYPCKKD 167

Query: 272 NLCSKEFSCKSHLKEHMQ-VHQ 292
           + CS      +   +H+   HQ
Sbjct: 168 DSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 98.8 bits (247), Expect = 5e-24
 Identities = 50/215 (23%), Positives = 71/215 (33%), Gaps = 46/215 (21%)

Query: 179 HMKRHQGIK-YKCNL--CSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHL 234
                   K Y C+   C   ++    L  H+  H  E  + C                 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPC----------------- 45

Query: 235 KLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN--LCSKEFSCKSHLKEHMQVH 291
                   K   C K F+    LT H   H G KN  C+   C   F+ K+++K+H    
Sbjct: 46  --------KEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRF 97

Query: 292 QG---ITYKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KC--VLCSKEFSSKSYLTEHMK 343
                  Y C    C K F +   L  H   H      +C    C K FS  S L  H K
Sbjct: 98  HNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK 157

Query: 344 LHQGIK----NKCDLCSKEFSCKRYVTEHMKLHQE 374
           +H G      + C    K ++   Y+    + HQ+
Sbjct: 158 VHAGYPCKKDDSCSFVGKTWT--LYLKHVAECHQD 190

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 93.8 bits (234), Expect = 2e-22
 Identities = 47/183 (25%), Positives = 67/183 (36%), Gaps = 18/183 (9%)

Query: 422 HMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQGIT-YKCN--LCSKEFYRKQNLTK 475
              L +  K   C+   C   ++    L+ H+  H G   + C    C K F    +LT+
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 476 HMKLHQGIKK-KCD--LCSKEFSTKCSLTEHMKLHQGIKK---KCDL--CSKEFSCKRSV 527
           H   H G K   CD   C   F+TK ++ +H      IK     C    C K F     +
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122

Query: 528 TEHMKLHLGIKN-KC--DLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTE 583
             H   H      +C  + C K FS    L  H K+H G    K D C+          +
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182

Query: 584 HMK 586
           H+ 
Sbjct: 183 HVA 185

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 93.0 bits (232), Expect = 4e-22
 Identities = 48/170 (28%), Positives = 63/170 (37%), Gaps = 16/170 (9%)

Query: 409 CSKEFSRKRRLTEHMKLHLGIK-NKCN--LCSKEFSCKSHLKEHMQVHQG-ITYKCN--L 462
           C   +++  +L  H+  H G K   C    C K F+   HL  H   H G   + C+   
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDG 79

Query: 463 CSKEFYRKQNLTKHMKLHQGIKK---KCDL--CSKEFSTKCSLTEHMKLHQGIKK-KC-- 514
           C   F  K N+ KH      IK     C    C K F     L  H   H      +C  
Sbjct: 80  CDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPH 139

Query: 515 DLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMK-LHQ 562
           + C K FS    +  H K+H G    K D CS    T     +H+   HQ
Sbjct: 140 EGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 91.5 bits (228), Expect = 2e-21
 Identities = 52/183 (28%), Positives = 67/183 (36%), Gaps = 18/183 (9%)

Query: 368 HMKLHQ-EITYKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKC--VLCSKEFSRKRRLTE 421
              L      Y C    C   Y+    L  HL  H G K   C    C K F+    LT 
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 422 HMKLHLGIKN-KCN--LCSKEFSCKSHLKEHMQVHQG---ITYKCNL--CSKEFYRKQNL 473
           H   H G KN  C+   C   F+ K+++K+H           Y C+   C K F +   L
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122

Query: 474 TKHMKLHQGIKK-KC--DLCSKEFSTKCSLTEHMKLHQGIK-KKCDLCSKEFSCKRSVTE 529
             H   H      +C  + C K FS    L  H K+H G   KK D CS          +
Sbjct: 123 KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLK 182

Query: 530 HMK 532
           H+ 
Sbjct: 183 HVA 185

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 81.5 bits (202), Expect = 5e-18
 Identities = 45/149 (30%), Positives = 59/149 (39%), Gaps = 16/149 (10%)

Query: 458 YKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCD--LCSKEFSTKCSLTEHMKLHQGIKK 512
           Y C+   C   + +   L  H+  H G K   C    C K F++   LT H   H G K 
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72

Query: 513 -KCD--LCSKEFSCKRSVTEHMKLHLGIKN---KCDL--CSKEFSTKHTLTEHMKLHQGI 564
             CD   C   F+ K ++ +H      IK     C    C K F   + L  H   H   
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132

Query: 565 R-YKC--DLCTKEFSRKGRLTEHMKLHLG 590
             Y+C  + C K FS   RL  H K+H G
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEKVHAG 161

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 87.3 bits (217), Expect = 2e-20
 Identities = 44/174 (25%), Positives = 65/174 (37%), Gaps = 36/174 (20%)

Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ----EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNK 243
            + + CS+EF S+  L  H+           + C                          
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG----------------------G 41

Query: 244 CVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQGIT-YKC- 298
           C    + F  +  L  HM+ H G K +KC    C K +S   +LK H++ H G   Y C 
Sbjct: 42  CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCE 101

Query: 299 -DLCSKEFYRKQNLTKHMK-VHQGMKN---KCVLCSKEFSSKSYLTEHMKLHQG 347
            + CSK F    +  KH    H   K    K   C+K ++  S L +H+K   G
Sbjct: 102 HEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 80.3 bits (199), Expect = 5e-18
 Identities = 44/152 (28%), Positives = 65/152 (42%), Gaps = 19/152 (12%)

Query: 377 YKCDLCLKEYSNKIYLTEHLK---LHQGIKN------KCVLCSKEFSRKRRLTEHMKLHL 427
            + D C +E+ ++  L  H+    +H   K        C    + F  +  L  HM+ H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 428 GIK-NKCNL--CSKEFSCKSHLKEHMQVHQGIT-YKCN--LCSKEFYRKQNLTKHMK-LH 480
           G K +KC    C K +S   +LK H++ H G   Y C    CSK F    +  KH    H
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 481 QGIKK-KCDL--CSKEFSTKCSLTEHMKLHQG 509
              K   C L  C+K ++   SL +H+K   G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 80.3 bits (199), Expect = 5e-18
 Identities = 45/177 (25%), Positives = 67/177 (37%), Gaps = 42/177 (23%)

Query: 134 YKCDLCSKEFSCKRYLTEHMK---VHQGMKN------KCVLCSKEFSSKSYLTEHMKRHQ 184
            + D CS+EF  +  L  H+    +H   K        C    + F ++  L  HM+RH 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 185 GIK-YKCNL--CSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLHQGI 240
           G K +KC    C K +S    L  H++ H  E  Y C+                      
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEH--------------------- 102

Query: 241 KNKCVLCSKEFSRKRRLTEHMK-LHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQG 293
                 CSK FS      +H    H   K   C L  C+K ++  S L++H++   G
Sbjct: 103 ----EGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 79.9 bits (198), Expect = 8e-18
 Identities = 46/152 (30%), Positives = 67/152 (44%), Gaps = 19/152 (12%)

Query: 107 YKCDLCSKEYSYKHTLTEHMK---LHQGIR-YKCDLC-----SKEFSCKRYLTEHMKVHQ 157
            + D CS+E+  +  L  H+    +H   + + C         + F  +  L  HM+ H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 158 GMK-NKCVL--CSKEFSSKSYLTEHMKRHQGIK-YKCN--LCSKEFSSKSYLTEHMK-LH 210
           G K +KC    C K +S    L  H++ H G K Y C    CSK FS+ S   +H    H
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 211 Q-EITYKCDL--CLKEYSNKIYLTEHLKLHQG 239
             E  Y C L  C K Y++   L +H+K   G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 79.6 bits (197), Expect = 1e-17
 Identities = 43/151 (28%), Positives = 66/151 (43%), Gaps = 19/151 (12%)

Query: 405 KCVLCSKEFSRKRRLTEHMK---LHLGIKN------KCNLCSKEFSCKSHLKEHMQVHQG 455
           +   CS+EF  + +L  H+    +H   K        C+   + F  +  L  HM+ H G
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

Query: 456 IT-YKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KC--DLCSKEFSTKCSLTEHMK-LHQ 508
              +KC    C K + R +NL  H++ H G K   C  + CSK FS      +H    H 
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124

Query: 509 GIKK-KCDL--CSKEFSCKRSVTEHMKLHLG 536
             K   C L  C+K ++   S+ +H+K   G
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 78.0 bits (193), Expect = 4e-17
 Identities = 43/152 (28%), Positives = 65/152 (42%), Gaps = 19/152 (12%)

Query: 458 YKCNLCSKEFYRKQNLTKHMK---LHQGIK------KKCDLCSKEFSTKCSLTEHMKLHQ 508
            + + CS+EF  ++ L  H+    +H   K        C    + F  +  L  HM+ H 
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHT 63

Query: 509 GIKK-KCDL--CSKEFSCKRSVTEHMKLHLGIK-NKC--DLCSKEFSTKHTLTEHMK-LH 561
           G K  KC    C K +S   ++  H++ H G K   C  + CSK FS      +H    H
Sbjct: 64  GEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTH 123

Query: 562 QGIR-YKCDL--CTKEFSRKGRLTEHMKLHLG 590
              + Y C L  CTK ++    L +H+K   G
Sbjct: 124 SNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 77.6 bits (192), Expect = 5e-17
 Identities = 42/149 (28%), Positives = 65/149 (43%), Gaps = 19/149 (12%)

Query: 243 KCVLCSKEFSRKRRLTEHMK---LHLGIKN------KCNLCSKEFSCKSHLKEHMQVHQG 293
           +   CS+EF  + +L  H+    +H   K        C+   + F  +  L  HM+ H G
Sbjct: 5   RWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG 64

Query: 294 IT-YKCDL--CSKEFYRKQNLTKHMKVHQGMK-NKC--VLCSKEFSSKSYLTEHMK-LHQ 346
              +KC    C K + R +NL  H++ H G K   C    CSK FS+ S   +H    H 
Sbjct: 65  EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHS 124

Query: 347 GIK-NKCDL--CSKEFSCKRYVTEHMKLH 372
             K   C L  C+K ++    + +H+K  
Sbjct: 125 NEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 84.5 bits (210), Expect = 6e-20
 Identities = 35/113 (30%), Positives = 52/113 (46%), Gaps = 9/113 (7%)

Query: 107 YKCD--LCSKEYSYKHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTEHMKVHQGMK- 160
           + C    C+K Y     L  H + H G + Y+CD   C + FS    L  H + H G+K 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 161 NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNL--CSKEFSSKSYLTEHMKLH 210
            +C  C ++FS   +L  H + H G K + C    C K+F+    L  H  +H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 82.6 bits (205), Expect = 3e-19
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNL--CSKEFSCKSHLKEHMQVHQGIT-YKCDLCS 302
           C+K + +   L  H + H G K  +C+   C + FS    LK H + H G+  ++C  C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73

Query: 303 KEFYRKQNLTKHMKVHQGMK-NKCVL--CSKEFSSKSYLTEHMKLH 345
           ++F R  +L  H + H G K   C    C K+F+    L  H  +H
Sbjct: 74  RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 81.8 bits (203), Expect = 7e-19
 Identities = 32/106 (30%), Positives = 50/106 (47%), Gaps = 7/106 (6%)

Query: 409 CSKEFSRKRRLTEHMKLHLGIKN-KCNL--CSKEFSCKSHLKEHMQVHQGIT-YKCNLCS 464
           C+K + +   L  H + H G K  +C+   C + FS    LK H + H G+  ++C  C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQ 73

Query: 465 KEFYRKQNLTKHMKLHQGIKK-KCDL--CSKEFSTKCSLTEHMKLH 507
           ++F R  +L  H + H G K   C    C K+F+    L  H  +H
Sbjct: 74  RKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 80.6 bits (200), Expect = 1e-18
 Identities = 34/112 (30%), Positives = 52/112 (46%), Gaps = 9/112 (8%)

Query: 432 KCN--LCSKEFSCKSHLKEHMQVHQGIT-YKCNL--CSKEFYRKQNLTKHMKLHQGIKK- 485
            C    C+K +   SHL+ H + H G   Y+C+   C + F R   L +H + H G+K  
Sbjct: 8   MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67

Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFSCKRSVTEHMKLH 534
           +C  C ++FS    L  H + H G K   C    C K+F+    +  H  +H
Sbjct: 68  QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 79.9 bits (198), Expect = 3e-18
 Identities = 35/112 (31%), Positives = 53/112 (47%), Gaps = 9/112 (8%)

Query: 270 KCN--LCSKEFSCKSHLKEHMQVHQGIT-YKCDL--CSKEFYRKQNLTKHMKVHQGMK-N 323
            C    C+K +   SHL+ H + H G   Y+CD   C + F R   L +H + H G+K  
Sbjct: 8   MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67

Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFSCKRYVTEHMKLH 372
           +C  C ++FS   +L  H + H G K   C    C K+F+    +  H  +H
Sbjct: 68  QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 79.5 bits (197), Expect = 4e-18
 Identities = 38/138 (27%), Positives = 56/138 (40%), Gaps = 32/138 (23%)

Query: 188 YKCN--LCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKC 244
           + C    C+K +   S+L  H + H  E  Y+CD                          
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCD-------------------------F 41

Query: 245 VLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDL-- 300
             C + FSR  +L  H + H G+K  +C  C ++FS   HLK H + H G   + C    
Sbjct: 42  KDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPS 101

Query: 301 CSKEFYRKQNLTKHMKVH 318
           C K+F R   L +H  +H
Sbjct: 102 CQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 77.6 bits (192), Expect = 2e-17
 Identities = 37/113 (32%), Positives = 53/113 (46%), Gaps = 9/113 (7%)

Query: 377 YKCD--LCLKEYSNKIYLTEHLKLHQGIKN-KCVL--CSKEFSRKRRLTEHMKLHLGIK- 430
           + C    C K Y    +L  H + H G K  +C    C + FSR  +L  H + H G+K 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 431 NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNL--CSKEFYRKQNLTKHMKLH 480
            +C  C ++FS   HLK H + H G   + C    C K+F R   L +H  +H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 77.2 bits (191), Expect = 3e-17
 Identities = 34/138 (24%), Positives = 54/138 (39%), Gaps = 32/138 (23%)

Query: 134 YKCD--LCSKEFSCKRYLTEHMKVHQGMKN-KCVL--CSKEFSSKSYLTEHMKRHQGIK- 187
           + C    C+K +    +L  H + H G K  +C    C + FS    L  H +RH G+K 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 188 YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVL 246
           ++C  C ++FS   +L  H + H  E  + C                         +   
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC-------------------------RWPS 101

Query: 247 CSKEFSRKRRLTEHMKLH 264
           C K+F+R   L  H  +H
Sbjct: 102 CQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 76.0 bits (188), Expect = 6e-17
 Identities = 33/113 (29%), Positives = 52/113 (46%), Gaps = 9/113 (7%)

Query: 458 YKCN--LCSKEFYRKQNLTKHMKLHQGIKK-KCDL--CSKEFSTKCSLTEHMKLHQGIKK 512
           + C    C+K +++  +L  H + H G K  +CD   C + FS    L  H + H G+K 
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 513 -KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFSTKHTLTEHMKLH 561
            +C  C ++FS    +  H + H G K   C    C K+F+    L  H  +H
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 74.1 bits (183), Expect = 3e-16
 Identities = 33/112 (29%), Positives = 50/112 (44%), Gaps = 9/112 (8%)

Query: 486 KCD--LCSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFSCKRSVTEHMKLHLGIK-N 539
            C    C+K +     L  H + H G K  +CD   C + FS    +  H + H G+K  
Sbjct: 8   MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67

Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL--CTKEFSRKGRLTEHMKLH 588
           +C  C ++FS    L  H + H G + + C    C K+F+R   L  H  +H
Sbjct: 68  QCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 59.5 bits (145), Expect = 4e-11
 Identities = 25/84 (29%), Positives = 39/84 (46%), Gaps = 6/84 (7%)

Query: 513 KCD--LCSKEFSCKRSVTEHMKLHLGIKN-KCDL--CSKEFSTKHTLTEHMKLHQGIR-Y 566
            C    C+K +     +  H + H G K  +CD   C + FS    L  H + H G++ +
Sbjct: 8   MCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPF 67

Query: 567 KCDLCTKEFSRKGRLTEHMKLHLG 590
           +C  C ++FSR   L  H + H G
Sbjct: 68  QCKTCQRKFSRSDHLKTHTRTHTG 91

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 83.9 bits (208), Expect = 3e-19
 Identities = 33/165 (20%), Positives = 52/165 (31%), Gaps = 26/165 (15%)

Query: 166 CSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKE 223
                             +         C + FS+   L  H+ +       + +     
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 224 YSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSC 280
                              +C    K F  K +L  H+++H G K   C    C K F+ 
Sbjct: 63  E------------------ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR 104

Query: 281 KSHLKEHMQVHQGIT-YKCDL--CSKEFYRKQNLTKHMKVHQGMK 322
             +LK H + H G   +KC+   C + F    +  KHM VH   K
Sbjct: 105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 78.9 bits (195), Expect = 2e-17
 Identities = 34/147 (23%), Positives = 50/147 (34%), Gaps = 17/147 (11%)

Query: 220 CLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK---------- 268
                           + +         C + FS    L  H+ +               
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 269 NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDL--CSKEFYRKQNLTKHMKVHQGMK-NK 324
            +C    K F  K  L  H++VH G   + C    C K F R +NL  H + H G K  K
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 325 CVL--CSKEFSSKSYLTEHMKLHQGIK 349
           C    C + F++ S   +HM +H   K
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 78.1 bits (193), Expect = 4e-17
 Identities = 33/147 (22%), Positives = 49/147 (33%), Gaps = 17/147 (11%)

Query: 382 CLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK---------- 430
                           + +         C + FS    L  H+ +               
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 431 NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-K 486
            +C    K F  K  L  H++VH G   + C    C K F R +NL  H + H G K  K
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 487 CDL--CSKEFSTKCSLTEHMKLHQGIK 511
           C+   C + F+      +HM +H   K
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 76.9 bits (190), Expect = 7e-17
 Identities = 32/129 (24%), Positives = 49/129 (37%), Gaps = 17/129 (13%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG----------IRYKCDLCSKEFSCKRYLTEHMKVH 156
                C + +S  H L  H+ +                +C    K F  K  L  H++VH
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 157 QGMK-NKCVL--CSKEFSSKSYLTEHMKRHQGIK-YKCNL--CSKEFSSKSYLTEHMKLH 210
            G K   C    C K F+    L  H + H G K +KC    C + F++ S   +HM +H
Sbjct: 86  TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVH 145

Query: 211 Q-EITYKCD 218
             + +    
Sbjct: 146 TSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 75.4 bits (186), Expect = 3e-16
 Identities = 29/147 (19%), Positives = 49/147 (33%), Gaps = 17/147 (11%)

Query: 112 CSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK---------- 160
                           + +         C + FS    L  H+ +               
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 161 NKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNL--CSKEFSSKSYLTEHMKLHQ-EITYK 216
            +C    K F +K  L  H++ H G K + C    C K F+    L  H + H  E  +K
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 217 CDL--CLKEYSNKIYLTEHLKLHQGIK 241
           C+   C + ++N     +H+ +H   K
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 75.4 bits (186), Expect = 3e-16
 Identities = 31/147 (21%), Positives = 49/147 (33%), Gaps = 17/147 (11%)

Query: 409 CSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG----------IT 457
                   ++      +           C + FS    L  H+ +               
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDL--CSKEFSTKCSLTEHMKLHQGIKK-K 513
            +C    K F  K  L  H+++H G K   C    C K F+   +L  H + H G K  K
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 514 CDL--CSKEFSCKRSVTEHMKLHLGIK 538
           C+   C + F+      +HM +H   K
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 75.0 bits (185), Expect = 4e-16
 Identities = 29/145 (20%), Positives = 50/145 (34%), Gaps = 17/145 (11%)

Query: 463 CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK---------- 511
                   +       + +         C + FST   L  H+ +               
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 512 KKCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFSTKHTLTEHMKLHQGIR-YK 567
           ++C    K F  K  +  H+++H G K   C    C K F+    L  H + H G + +K
Sbjct: 63  EECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFK 122

Query: 568 CDL--CTKEFSRKGRLTEHMKLHLG 590
           C+   C + F+      +HM +H  
Sbjct: 123 CEFEGCDRRFANSSDRKKHMHVHTS 147

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 74.2 bits (183), Expect = 8e-16
 Identities = 31/165 (18%), Positives = 51/165 (30%), Gaps = 26/165 (15%)

Query: 328 CSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKE 385
                           + +         C + FS    +  H+ +       + +     
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYW 62

Query: 386 YSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSC 442
                              +C    K F  K +L  H+++H G K   C    C K F+ 
Sbjct: 63  E------------------ECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR 104

Query: 443 KSHLKEHMQVHQGIT-YKCNL--CSKEFYRKQNLTKHMKLHQGIK 484
             +LK H + H G   +KC    C + F    +  KHM +H   K
Sbjct: 105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 70.4 bits (173), Expect = 1e-14
 Identities = 29/148 (19%), Positives = 51/148 (34%), Gaps = 20/148 (13%)

Query: 276 KEFSCKSHLKEHMQVHQGIT----YKCDLCSKEFYRKQNLTKHMKVHQGMK--------- 322
              S    +K+ +                C + F     L  H+ +              
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 323 -NKCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFSCKRYVTEHMKLHQ-EITY 377
             +C    K F +K  L  H+++H G K   C    C K F+    +  H + H  E  +
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121

Query: 378 KCDL--CLKEYSNKIYLTEHLKLHQGIK 403
           KC+   C + ++N     +H+ +H   K
Sbjct: 122 KCEFEGCDRRFANSSDRKKHMHVHTSDK 149

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 55.4 bits (134), Expect = 2e-09
 Identities = 26/104 (25%), Positives = 43/104 (41%), Gaps = 7/104 (6%)

Query: 95  GKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTE 151
           G  ++        +C    K +  K+ L  H+++H G + + C    C K F+    L  
Sbjct: 51  GGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKI 110

Query: 152 HMKVHQGMK-NKCVL--CSKEFSSKSYLTEHMKRHQGIK-YKCN 191
           H + H G K  KC    C + F++ S   +HM  H   K    +
Sbjct: 111 HKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 82.2 bits (204), Expect = 5e-19
 Identities = 33/108 (30%), Positives = 52/108 (48%), Gaps = 6/108 (5%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMK---VHQGMKN- 161
            +C  C K++  K+ L  H + H G + ++C  C K +  K  L EH     +++  +  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMK 208
            C +C + F  +  L  HM  H G   YKC+ CS++F  K  L  HM 
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 80.2 bits (199), Expect = 2e-18
 Identities = 39/114 (34%), Positives = 52/114 (45%), Gaps = 7/114 (6%)

Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT----YK 297
           +C  C K+F  K  L  H + H G K  +C  C K +  K +L EH   +        + 
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68

Query: 298 CDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHM-KLHQGIK 349
           C +C + F R+  L  HM  H G    KC  CS++F  K  L  HM KLH G  
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 79.5 bits (197), Expect = 5e-18
 Identities = 38/115 (33%), Positives = 56/115 (48%), Gaps = 7/115 (6%)

Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKR---HQGIK-Y 188
            +C  C K+F  K YL  H + H G K  +C  C K +  K  L EH  R   ++  + +
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 189 KCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEH-LKLHQGIK 241
            C++C + F  +  L  HM  H  E+ YKC  C +++  K  L  H +KLH G  
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 79.1 bits (196), Expect = 6e-18
 Identities = 39/114 (34%), Positives = 53/114 (46%), Gaps = 7/114 (6%)

Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT----YK 459
           +C  C K+F  K  L  H + H G K  +C  C K +  K +L EH   +        + 
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68

Query: 460 CNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHM-KLHQGIK 511
           C++C + F R+  L  HM  H G    KC  CS++F  K  L  HM KLH G  
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 77.2 bits (191), Expect = 3e-17
 Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 7/113 (6%)

Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEH---LKLHQGIKN- 242
            +C  C K+F SK YL  H + H  E  ++C  C K Y  K  L EH     +++  +  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQ-VHQG 293
            C +C + F R+  L  HM  H G    KC+ CS++F  K  L+ HM  +H G
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 71.8 bits (177), Expect = 2e-15
 Identities = 37/113 (32%), Positives = 52/113 (46%), Gaps = 7/113 (6%)

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKL---HQGIKK- 512
            +C  C K+F  K  L  H + H G K  +C  C K +  K +L EH      ++  +  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHM-KLHQG 563
            C +C + F  +  +  HM  H G    KC  CS++F  K  L  HM KLH G
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 70.2 bits (173), Expect = 9e-15
 Identities = 37/112 (33%), Positives = 54/112 (48%), Gaps = 7/112 (6%)

Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKL---HLGIKN-K 540
           +C  C K+F +K  L  H + H G K  +C  C K +  K ++ EH      +   +   
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFT 68

Query: 541 CDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHM-KLHLG 590
           C +C + F  +  L  HM  H G   YKC  C+++F +K  L  HM KLH G
Sbjct: 69  CSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 67.1 bits (165), Expect = 8e-14
 Identities = 35/115 (30%), Positives = 52/115 (45%), Gaps = 7/115 (6%)

Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKL---HQGIKN- 350
            +C  C K+F  K  L  H + H G K  +C  C K +  K  L EH      ++  +  
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 351 KCDLCSKEFSCKRYVTEHMKLH-QEITYKCDLCLKEYSNKIYLTEH-LKLHQGIK 403
            C +C + F  +  +  HM  H  E+ YKC  C +++  K  L  H +KLH G  
Sbjct: 68  TCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 44.4 bits (106), Expect = 8e-06
 Identities = 20/56 (35%), Positives = 29/56 (51%), Gaps = 2/56 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHM-KVHQGMK 160
           + C +C + +  +  L  HM  H G   YKC  CS++F  K+ L  HM K+H G  
Sbjct: 67  FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 78.3 bits (194), Expect = 1e-17
 Identities = 32/112 (28%), Positives = 47/112 (41%), Gaps = 8/112 (7%)

Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMK-NKC 163
             C    C+K +     + +H+  H    + C  C K F     L  H  VH G K  +C
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65

Query: 164 VL--CSKEFSSKSYLTEHMKRHQGIK-YKCNL--CSKEFSSKSYLTEHMKLH 210
               C K FS    L  H++ H G + Y C    C+K+F+  + L  H+  H
Sbjct: 66  TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTH 117

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 77.2 bits (191), Expect = 3e-17
 Identities = 31/112 (27%), Positives = 51/112 (45%), Gaps = 6/112 (5%)

Query: 433 CNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDL-- 489
              C+K F   S +++H+  H    + C  C K F     L +H  +H G K  +C    
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG 69

Query: 490 CSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFSCKRSVTEHMKLHLGIK 538
           C K FS   +L  H+++H G +   C    C+K+F+   ++  H+  H   K
Sbjct: 70  CGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 73.7 bits (182), Expect = 4e-16
 Identities = 32/114 (28%), Positives = 50/114 (43%), Gaps = 8/114 (7%)

Query: 188 YKCNL--CSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKC 244
             C    C+K F   S + +H+  H    + C  C K +     L  H  +H G K  +C
Sbjct: 6   IACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQC 65

Query: 245 VL--CSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQG 293
               C K FS    L  H+++H G +   C    C+K+F+  ++LK H+  H  
Sbjct: 66  TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 67.2 bits (165), Expect = 9e-14
 Identities = 32/108 (29%), Positives = 48/108 (44%), Gaps = 8/108 (7%)

Query: 490 CSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CS 545
           C+K F    ++ +H+  H G +   C  C K F     +  H  +H G K  +C    C 
Sbjct: 13  CTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71

Query: 546 KEFSTKHTLTEHMKLHQGIR-YKCDL--CTKEFSRKGRLTEHMKLHLG 590
           K FS    L  H+++H G R Y C    C K+F++   L  H+  H  
Sbjct: 72  KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 67.2 bits (165), Expect = 9e-14
 Identities = 30/107 (28%), Positives = 48/107 (44%), Gaps = 6/107 (5%)

Query: 355 CSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVL--CSK 411
           C+K F     + +H+  H    + C  C K +     L  H  +H G K  +C    C K
Sbjct: 13  CTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGK 72

Query: 412 EFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQG 455
            FS    L  H+++H G +   C    C+K+F+  ++LK H+  H  
Sbjct: 73  RFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 62.5 bits (153), Expect = 4e-12
 Identities = 34/163 (20%), Positives = 51/163 (31%), Gaps = 54/163 (33%)

Query: 271 CNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVL-- 327
              C+K F   S +++H+  H    + C  C K F     L +H  VH G K  +C    
Sbjct: 10  HKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEG 69

Query: 328 CSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYS 387
           C K FS    L  H+++H G                          +  Y C        
Sbjct: 70  CGKRFSLDFNLRTHVRIHTG--------------------------DRPYVCPF------ 97

Query: 388 NKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIK 430
                                C+K+F++   L  H+  H   K
Sbjct: 98  -----DG--------------CNKKFAQSTNLKSHILTHAKAK 121

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 61.8 bits (151), Expect = 8e-12
 Identities = 34/118 (28%), Positives = 50/118 (42%), Gaps = 10/118 (8%)

Query: 295 TYKCDL--CSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIK-N 350
           T  C    C+K F     + KH+  H G + + C  C K F   S L  H  +H G K  
Sbjct: 5   TIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 63

Query: 351 KCDL--CSKEFSCKRYVTEHMKLHQ-EITYKCDL--CLKEYSNKIYLTEHLKLHQGIK 403
           +C    C K FS    +  H+++H  +  Y C    C K+++    L  H+  H   K
Sbjct: 64  QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAK 121

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 60.2 bits (147), Expect = 2e-11
 Identities = 24/87 (27%), Positives = 39/87 (44%), Gaps = 6/87 (6%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTEHMKVHQGMK-NK 162
           + C  C K +     L  H  +H G + ++C    C K FS    L  H+++H G +   
Sbjct: 35  HVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV 94

Query: 163 CVL--CSKEFSSKSYLTEHMKRHQGIK 187
           C    C+K+F+  + L  H+  H   K
Sbjct: 95  CPFDGCNKKFAQSTNLKSHILTHAKAK 121

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 76.7 bits (190), Expect = 2e-17
 Identities = 28/87 (32%), Positives = 44/87 (50%), Gaps = 3/87 (3%)

Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
           +KC++C K FS K  L  HM+ H G+K  KC  C    +  S L +H++ H   + +KC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 192 LCSKEFSSKSYLTEHMKLHQ-EITYKC 217
           +C     + S LT H++ H  +     
Sbjct: 69  ICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 73.2 bits (181), Expect = 3e-16
 Identities = 30/82 (36%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVL 327
           KC +C K FS K  LK HM+ H G+  YKC  C        +L KH+++H   +  KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

Query: 328 CSKEFSSKSYLTEHMKLHQGIK 349
           C     + S LT H++ H G  
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDS 91

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 71.7 bits (177), Expect = 1e-15
 Identities = 29/82 (35%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDL 489
           KC +C K FS K  LK HM+ H G+  YKC  C        +L KH+++H   +  KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

Query: 490 CSKEFSTKCSLTEHMKLHQGIK 511
           C         LT H++ H G  
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDS 91

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 71.3 bits (176), Expect = 2e-15
 Identities = 27/87 (31%), Positives = 44/87 (50%), Gaps = 3/87 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           +KC++C K +S K  L  HM+ H G++ YKC  C    +    L +H+++H   +  KC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKC 190
           +C     + S LT H++ H G      
Sbjct: 69  ICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 69.0 bits (170), Expect = 1e-14
 Identities = 29/82 (35%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNL 462
           KC +C K FSRK +L  HM+ H G+K  KC  C    +  S L +H+++H     +KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

Query: 463 CSKEFYRKQNLTKHMKLHQGIK 484
           C         LT H++ H G  
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDS 91

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 66.7 bits (164), Expect = 6e-14
 Identities = 27/83 (32%), Positives = 41/83 (49%), Gaps = 2/83 (2%)

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCD 515
           +KC +C K F RK  L  HM+ H G+K  KC  C    +   SL +H+++H   +  KC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 516 LCSKEFSCKRSVTEHMKLHLGIK 538
           +C         +T H++ H G  
Sbjct: 69  ICPYASRNSSQLTVHLRSHTGDS 91

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 66.7 bits (164), Expect = 7e-14
 Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 3/87 (3%)

Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCD 353
           +KC++C K F RK  L  HM+ H G+K  KC  C    +  S L +H+++H   +  KC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 354 LCSKEFSCKRYVTEHMKLHQ-EITYKC 379
           +C         +T H++ H  +     
Sbjct: 69  ICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 64.0 bits (157), Expect = 7e-13
 Identities = 27/80 (33%), Positives = 43/80 (53%), Gaps = 2/80 (2%)

Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL 570
           KC++C K FS K  +  HM+ H G+K  KC  C    +   +L +H+++H   R +KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

Query: 571 CTKEFSRKGRLTEHMKLHLG 590
           C        +LT H++ H G
Sbjct: 70  CPYASRNSSQLTVHLRSHTG 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 62.8 bits (154), Expect = 1e-12
 Identities = 27/83 (32%), Positives = 40/83 (48%), Gaps = 2/83 (2%)

Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCV 245
           +KC +C K FS K  L  HM+ H     YKC  C    ++   L +HL++H   +  KC 
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 246 LCSKEFSRKRRLTEHMKLHLGIK 268
           +C        +LT H++ H G  
Sbjct: 69  ICPYASRNSSQLTVHLRSHTGDS 91

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 57.4 bits (140), Expect = 1e-10
 Identities = 29/82 (35%), Positives = 41/82 (50%), Gaps = 2/82 (2%)

Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH-QEITYKCDL 381
           KC +C K FS K  L  HM+ H G+K  KC  C    +    + +H+++H  E  +KC +
Sbjct: 10  KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQI 69

Query: 382 CLKEYSNKIYLTEHLKLHQGIK 403
           C     N   LT HL+ H G  
Sbjct: 70  CPYASRNSSQLTVHLRSHTGDS 91

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 77.1 bits (191), Expect = 2e-17
 Identities = 24/101 (23%), Positives = 38/101 (37%), Gaps = 4/101 (3%)

Query: 121 TLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTE 178
             +      +  + + C  C + F+    L  H + H   +   C +C K F  + +L +
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKC 217
           H   H   K +KC  C K F     L  H  LH Q  +   
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 69.4 bits (171), Expect = 8e-15
 Identities = 28/104 (26%), Positives = 43/104 (41%), Gaps = 4/104 (3%)

Query: 173 KSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYL 230
            S  +      +  K + C  C + F+    L  H + H  E  Y CD+C K +  + +L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 231 TEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN 272
            +H  +H   K  KC  C K F + R L  H  LH+   +    
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 69.0 bits (170), Expect = 1e-14
 Identities = 26/103 (25%), Positives = 39/103 (37%), Gaps = 4/103 (3%)

Query: 281 KSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
            S         +    + C  C + F +  NL  H + H   +   C +C K F  + +L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 339 TEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLH-QEITYKC 379
            +H  +H   K  KC  C K F   R +  H  LH Q  +   
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 68.2 bits (168), Expect = 2e-14
 Identities = 24/97 (24%), Positives = 40/97 (41%), Gaps = 3/97 (3%)

Query: 391 YLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKE 448
             +      +  K   C  C + F++   L  H + H   +   C++C K F  + HL++
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 449 HMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIK 484
           H  +H     +KC  C K F + + L  H  LH    
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 67.8 bits (167), Expect = 3e-14
 Identities = 23/97 (23%), Positives = 40/97 (41%), Gaps = 3/97 (3%)

Query: 229 YLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKE 286
             +      +  K   C  C + F++   L  H + H   +   C++C K F  + HL++
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 287 HMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
           H  +H     +KC  C K F + + L  H  +H    
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 67.8 bits (167), Expect = 3e-14
 Identities = 24/88 (27%), Positives = 35/88 (39%), Gaps = 3/88 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCV 164
           + C  C + ++  + L  H + H   R Y CD+C K F  + +L +H  +H   K  KC 
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
            C K F     L  H   H         
Sbjct: 78  ECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 67.5 bits (166), Expect = 5e-14
 Identities = 26/99 (26%), Positives = 39/99 (39%), Gaps = 3/99 (3%)

Query: 443 KSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSL 500
            S         +    + C  C + F +  NL  H + H   +   CD+C K F  +  L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 501 TEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK 538
            +H  +H   K  KC  C K F   R++  H  LH+   
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 62.8 bits (154), Expect = 2e-12
 Identities = 23/95 (24%), Positives = 40/95 (42%), Gaps = 3/95 (3%)

Query: 499 SLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTE 556
             +      +  K+  C  C + F+   ++  H + H   +   CD+C K F  +  L +
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 557 HMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
           H  +H   + +KC  C K F +   L  H  LH+ 
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQ 98

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 59.8 bits (146), Expect = 2e-11
 Identities = 23/97 (23%), Positives = 37/97 (38%), Gaps = 3/97 (3%)

Query: 310 NLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTE 367
             +      +  K   C  C + F+    L  H + H   +   CD+C K F  + ++ +
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 368 HMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 403
           H  +H  E  +KC  C K +     L  H  LH    
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTS 100

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 59.0 bits (144), Expect = 4e-11
 Identities = 27/104 (25%), Positives = 42/104 (40%), Gaps = 4/104 (3%)

Query: 335 KSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYL 392
            S  +      +  K   C  C + F+    +  H + H  E  Y CD+C K +  + +L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 393 TEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN 434
            +H  +H   K  KC  C K F + R L  H  LH+   +    
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 74.0 bits (183), Expect = 1e-16
 Identities = 27/79 (34%), Positives = 44/79 (55%), Gaps = 2/79 (2%)

Query: 247 CSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKE 304
           C + FS+   LT H+++H G K  +C +C + FS   HL  H++ H G   + CD+C ++
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71

Query: 305 FYRKQNLTKHMKVHQGMKN 323
           F R     +H K+H   K+
Sbjct: 72  FARSDERKRHTKIHLRQKD 90

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 74.0 bits (183), Expect = 2e-16
 Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 4/81 (4%)

Query: 134 YKCDL--CSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK-YK 189
           Y C +  C + FS    LT H+++H G K  +C +C + FS   +LT H++ H G K + 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 190 CNLCSKEFSSKSYLTEHMKLH 210
           C++C ++F+       H K+H
Sbjct: 65  CDICGRKFARSDERKRHTKIH 85

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 72.9 bits (180), Expect = 3e-16
 Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 274 CSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKE 331
           C + FS    L  H+++H G   ++C +C + F R  +LT H++ H G K   C +C ++
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71

Query: 332 FSSKSYLTEHMKLHQGIKN 350
           F+       H K+H   K+
Sbjct: 72  FARSDERKRHTKIHLRQKD 90

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 72.5 bits (179), Expect = 6e-16
 Identities = 25/78 (32%), Positives = 41/78 (52%), Gaps = 2/78 (2%)

Query: 436 CSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKE 493
           C + FS    L  H+++H G   ++C +C + F R  +LT H++ H G K   CD+C ++
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71

Query: 494 FSTKCSLTEHMKLHQGIK 511
           F+       H K+H   K
Sbjct: 72  FARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 71.7 bits (177), Expect = 8e-16
 Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 2/78 (2%)

Query: 409 CSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKE 466
           C + FS+   LT H+++H G K  +C +C + FS   HL  H++ H G   + C++C ++
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71

Query: 467 FYRKQNLTKHMKLHQGIK 484
           F R     +H K+H   K
Sbjct: 72  FARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 67.9 bits (167), Expect = 2e-14
 Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 4/86 (4%)

Query: 458 YKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-K 513
           Y C +  C + F +  +LT+H+++H G K  +C +C + FS    LT H++ H G K   
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 514 CDLCSKEFSCKRSVTEHMKLHLGIKN 539
           CD+C ++F+       H K+HL  K+
Sbjct: 65  CDICGRKFARSDERKRHTKIHLRQKD 90

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 66.7 bits (164), Expect = 5e-14
 Identities = 26/85 (30%), Positives = 45/85 (52%), Gaps = 4/85 (4%)

Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NK 162
           Y C +  C + +S   +LT H+++H G + ++C +C + FS   +LT H++ H G K   
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 163 CVLCSKEFSSKSYLTEHMKRHQGIK 187
           C +C ++F+       H K H   K
Sbjct: 65  CDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 65.2 bits (160), Expect = 2e-13
 Identities = 28/82 (34%), Positives = 46/82 (56%), Gaps = 4/82 (4%)

Query: 513 KCDL--CSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKC 568
            C +  C + FS   S+T H+++H G K  +C +C + FS    LT H++ H G + + C
Sbjct: 6   ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65

Query: 569 DLCTKEFSRKGRLTEHMKLHLG 590
           D+C ++F+R      H K+HL 
Sbjct: 66  DICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 65.2 bits (160), Expect = 2e-13
 Identities = 25/79 (31%), Positives = 43/79 (54%), Gaps = 2/79 (2%)

Query: 166 CSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKE 223
           C + FS    LT H++ H G K ++C +C + FS   +LT H++ H  E  + CD+C ++
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRK 71

Query: 224 YSNKIYLTEHLKLHQGIKN 242
           ++       H K+H   K+
Sbjct: 72  FARSDERKRHTKIHLRQKD 90

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 62.1 bits (152), Expect = 2e-12
 Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 4/83 (4%)

Query: 377 YKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NK 432
           Y C +  C + +S    LT H+++H G K  +C +C + FSR   LT H++ H G K   
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 433 CNLCSKEFSCKSHLKEHMQVHQG 455
           C++C ++F+     K H ++H  
Sbjct: 65  CDICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 54.0 bits (131), Expect = 2e-09
 Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 4/85 (4%)

Query: 351 KCDL--CSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKC 406
            C +  C + FS    +T H+++H  +  ++C +C++ +S   +LT H++ H G K   C
Sbjct: 6   ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC 65

Query: 407 VLCSKEFSRKRRLTEHMKLHLGIKN 431
            +C ++F+R      H K+HL  K+
Sbjct: 66  DICGRKFARSDERKRHTKIHLRQKD 90

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 53.6 bits (130), Expect = 2e-09
 Identities = 16/56 (28%), Positives = 31/56 (55%), Gaps = 1/56 (1%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN 161
           ++C +C + +S    LT H++ H G + + CD+C ++F+       H K+H   K+
Sbjct: 35  FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQKD 90

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 74.8 bits (185), Expect = 1e-16
 Identities = 31/101 (30%), Positives = 50/101 (49%), Gaps = 6/101 (5%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCV 164
           Y C  C K +++K     HM +H G+R Y C +C K+F  K +L  HMK+H G+K  +C 
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69

Query: 165 LCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLT 204
           +C+K F  +     H+      K Y+     +  +  S  +
Sbjct: 70  ICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 66.7 bits (164), Expect = 9e-14
 Identities = 30/96 (31%), Positives = 47/96 (48%), Gaps = 5/96 (5%)

Query: 436 CSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKE 493
           C K F+ KS    HM +H G+  Y C +C K+F  K +L  HMK+H GIK  +C++C+K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74

Query: 494 FSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVT 528
           F  + S   H+      K  +     +  +     +
Sbjct: 75  FMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 64.8 bits (159), Expect = 5e-13
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)

Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN 434
           Y C  C K +++K     H+ +H G++   C +C K+F  K  L  HMK+H GIK  +CN
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69

Query: 435 LCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLT 474
           +C+K F  +     H  V     +Y+     +        +
Sbjct: 70  ICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 64.4 bits (158), Expect = 5e-13
 Identities = 28/92 (30%), Positives = 45/92 (48%), Gaps = 5/92 (5%)

Query: 274 CSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKE 331
           C K F+ KS    HM +H G+  Y C +C K+F  K +L  HMK+H G+K  +C +C+K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74

Query: 332 FSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCK 362
           F  +     H+      K+ +     +  +  
Sbjct: 75  FMWRDSFHRHV--TSCTKSYEAAKAEQNTTEA 104

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 63.6 bits (156), Expect = 1e-12
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 5/96 (5%)

Query: 166 CSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKE 223
           C K F+ KS    HM  H G++ Y C +C K+F  K +L  HMK+H     Y+C++C K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74

Query: 224 YSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLT 258
           +  +     H  +    K+ +     +  +     +
Sbjct: 75  FMWRDSFHRH--VTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 63.2 bits (155), Expect = 2e-12
 Identities = 29/101 (28%), Positives = 47/101 (46%), Gaps = 6/101 (5%)

Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCN 272
           Y C  C K +++K     H+ +H G++   C +C K+F  K  L  HMK+H GIK  +CN
Sbjct: 11  YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69

Query: 273 LCSKEFSCKSHLKEHMQVHQG-ITYKCDLCSKEFYRKQNLT 312
           +C+K F  +     H  V     +Y+     +        +
Sbjct: 70  ICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 62.5 bits (153), Expect = 3e-12
 Identities = 27/100 (27%), Positives = 47/100 (47%), Gaps = 6/100 (6%)

Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDL 543
            C  C K F+ K     HM +H G++   C +C K+F  K  +  HMK+H GIK  +C++
Sbjct: 12  PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70

Query: 544 CSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLT 582
           C+K F  + +   H+      + Y+     +  +     +
Sbjct: 71  CAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 55.5 bits (135), Expect = 7e-10
 Identities = 29/75 (38%), Positives = 42/75 (56%), Gaps = 3/75 (4%)

Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL 570
            C  C K F+ K     HM +HLG++   C +C K+F  KH L  HMK+H GI+ Y+C++
Sbjct: 12  PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNI 70

Query: 571 CTKEFSRKGRLTEHM 585
           C K F  +     H+
Sbjct: 71  CAKRFMWRDSFHRHV 85

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 54.0 bits (131), Expect = 3e-09
 Identities = 24/96 (25%), Positives = 44/96 (45%), Gaps = 5/96 (5%)

Query: 328 CSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLH-QEITYKCDLCLKE 385
           C K F+ KS    HM +H G++   C +C K+F  K ++  HMK+H     Y+C++C K 
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKR 74

Query: 386 YSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLT 420
           +  +     H  +    K+ +     +  +     +
Sbjct: 75  FMWRDSFHRH--VTSCTKSYEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 44.7 bits (107), Expect = 5e-06
 Identities = 22/52 (42%), Positives = 28/52 (53%), Gaps = 2/52 (3%)

Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
            C  C K F+ K     HM +H G+R Y C +C K+F  K  L  HMK+H G
Sbjct: 12  PCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTG 62

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 71.1 bits (175), Expect = 2e-15
 Identities = 33/100 (33%), Positives = 45/100 (45%), Gaps = 7/100 (7%)

Query: 413 FSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNL--CSKEFYR 469
                   E  ++H      C    K ++  SHLK H++ H G   YKC    C   F R
Sbjct: 3   SGSSGPDLEKRRIHYCDYPGCT---KVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 470 KQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQ 508
              LT+H + H G K  +C +C++ FS    L  HMK HQ
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 68.8 bits (169), Expect = 1e-14
 Identities = 33/100 (33%), Positives = 46/100 (46%), Gaps = 7/100 (7%)

Query: 251 FSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDL--CSKEFYR 307
                   E  ++H      C    K ++  SHLK H++ H G   YKC    C   F R
Sbjct: 3   SGSSGPDLEKRRIHYCDYPGCT---KVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 308 KQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQ 346
              LT+H + H G K  +C +C++ FS   +L  HMK HQ
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 62.3 bits (152), Expect = 2e-12
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 225 SNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCK 281
            +     E  ++H      C   +K +++   L  H++ H G K  KC    C   F+  
Sbjct: 4   GSSGPDLEKRRIHYCDYPGC---TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARS 60

Query: 282 SHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQ 319
             L  H + H G   ++C +C++ F R  +L  HMK HQ
Sbjct: 61  DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 60.7 bits (148), Expect = 1e-11
 Identities = 27/99 (27%), Positives = 44/99 (44%), Gaps = 7/99 (7%)

Query: 387 SNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCK 443
            +     E  ++H      C   +K +++   L  H++ H G K  KC    C   F+  
Sbjct: 4   GSSGPDLEKRRIHYCDYPGC---TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARS 60

Query: 444 SHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQ 481
             L  H + H G   ++C +C++ F R  +L  HMK HQ
Sbjct: 61  DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 58.8 bits (143), Expect = 4e-11
 Identities = 29/99 (29%), Positives = 46/99 (46%), Gaps = 7/99 (7%)

Query: 117 SYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVL--CSKEFSSK 173
                  E  ++H         C+K ++   +L  H++ H G K  KC    C   F+  
Sbjct: 4   GSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARS 60

Query: 174 SYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ 211
             LT H ++H G K ++C +C++ FS   +L  HMK HQ
Sbjct: 61  DELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 58.4 bits (142), Expect = 7e-11
 Identities = 27/99 (27%), Positives = 43/99 (43%), Gaps = 7/99 (7%)

Query: 494 FSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFST 550
             +     E  ++H         C+K ++    +  H++ H G K  KC    C   F+ 
Sbjct: 3   SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 551 KHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLH 588
              LT H + H G + ++C +C + FSR   L  HMK H
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 57.6 bits (140), Expect = 1e-10
 Identities = 35/102 (34%), Positives = 47/102 (46%), Gaps = 11/102 (10%)

Query: 197 FSSKSYLTEHMKLHQEITYKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKCVL--CSKEF 251
             S     E  ++H      CD   C K Y+   +L  HL+ H G K  KC    C   F
Sbjct: 3   SGSSGPDLEKRRIH-----YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57

Query: 252 SRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 292
           +R   LT H + H G K  +C +C++ FS   HL  HM+ HQ
Sbjct: 58  ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 57.3 bits (139), Expect = 2e-10
 Identities = 27/100 (27%), Positives = 44/100 (44%), Gaps = 7/100 (7%)

Query: 143 FSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNL--CSKEFSS 199
                   E  ++H      C   +K ++  S+L  H++ H G K YKC    C   F+ 
Sbjct: 3   SGSSGPDLEKRRIHYCDYPGC---TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 200 KSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQ 238
              LT H + H     ++C +C + +S   +L  H+K HQ
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 56.9 bits (138), Expect = 2e-10
 Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 6/84 (7%)

Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTEHMKVHQGMKN 161
           + CD   C+K Y+    L  H++ H G + YKC    C   F+    LT H + H G K 
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP 75

Query: 162 -KCVLCSKEFSSKSYLTEHMKRHQ 184
            +C +C++ FS   +L  HMKRHQ
Sbjct: 76  FQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 56.1 bits (136), Expect = 4e-10
 Identities = 27/100 (27%), Positives = 42/100 (42%), Gaps = 7/100 (7%)

Query: 467 FYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFSC 523
                   +  ++H         C+K ++    L  H++ H G K  KC    C   F+ 
Sbjct: 3   SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 524 KRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQ 562
              +T H + H G K  +C +C++ FS    L  HMK HQ
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 54.6 bits (132), Expect = 2e-09
 Identities = 34/102 (33%), Positives = 46/102 (45%), Gaps = 11/102 (10%)

Query: 359 FSCKRYVTEHMKLHQEITYKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKCVL--CSKEF 413
                   E  ++H      CD   C K Y+   +L  HL+ H G K  KC    C   F
Sbjct: 3   SGSSGPDLEKRRIH-----YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRF 57

Query: 414 SRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQ 454
           +R   LT H + H G K  +C +C++ FS   HL  HM+ HQ
Sbjct: 58  ARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 7/100 (7%)

Query: 305 FYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDL--CSKEFSC 361
                   +  ++H      C   +K ++  S+L  H++ H G K  KC    C   F+ 
Sbjct: 3   SGSSGPDLEKRRIHYCDYPGC---TKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 362 KRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQ 400
              +T H + H     ++C +C + +S   +L  H+K HQ
Sbjct: 60  SDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 42.2 bits (100), Expect = 3e-05
 Identities = 19/73 (26%), Positives = 29/73 (39%), Gaps = 6/73 (8%)

Query: 521 FSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL--CTKEFSR 577
                   E  ++H         C+K ++    L  H++ H G + YKC    C   F+R
Sbjct: 3   SGSSGPDLEKRRIHYC---DYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFAR 59

Query: 578 KGRLTEHMKLHLG 590
              LT H + H G
Sbjct: 60  SDELTRHYRKHTG 72

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 69.4 bits (171), Expect = 5e-15
 Identities = 16/76 (21%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNL 192
           ++C +C + FS   +LT H++ H G K   C +C ++F+       H      +    + 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63

Query: 193 CSKEFSSKSYLTEHMK 208
             +  S   +L   + 
Sbjct: 64  VEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 69.4 bits (171), Expect = 5e-15
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLC 328
           +C +C + FS   HL  H++ H G   + CD+C ++F R     +H  +   +       
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64

Query: 329 SKEFSSKSYLTEHMK 343
            +  S   +L   + 
Sbjct: 65  EELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 68.7 bits (169), Expect = 1e-14
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLC 490
           +C +C + FS   HL  H++ H G   + C++C ++F R     +H  +   +    D  
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64

Query: 491 SKEFSTKCSLTEHMK 505
            +  S    L   + 
Sbjct: 65  EELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 66.8 bits (164), Expect = 4e-14
 Identities = 17/75 (22%), Positives = 34/75 (45%), Gaps = 1/75 (1%)

Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLC 463
           +C +C + FSR   LT H++ H G K   C++C ++F+     K H  +   +    +  
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64

Query: 464 SKEFYRKQNLTKHMK 478
            +   +  +L   + 
Sbjct: 65  EELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 65.2 bits (160), Expect = 2e-13
 Identities = 17/73 (23%), Positives = 33/73 (45%), Gaps = 1/73 (1%)

Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLC 220
           +C +C + FS   +LT H++ H G K + C++C ++F+       H  +   +    D  
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64

Query: 221 LKEYSNKIYLTEH 233
            +  S   +L   
Sbjct: 65  EELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 62.5 bits (153), Expect = 1e-12
 Identities = 16/78 (20%), Positives = 34/78 (43%), Gaps = 1/78 (1%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVL 165
           ++C +C + +S    LT H++ H G + + CD+C ++F+       H  +   +      
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63

Query: 166 CSKEFSSKSYLTEHMKRH 183
             +  S   +L   + R 
Sbjct: 64  VEELLSKNYHLENEVARL 81

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 61.7 bits (151), Expect = 3e-12
 Identities = 17/76 (22%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKKKCDL 516
           ++C +C + F R  +LT H++ H G K   CD+C ++F+       H  +   +    D 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63

Query: 517 CSKEFSCKRSVTEHMK 532
             +  S    +   + 
Sbjct: 64  VEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 61.4 bits (150), Expect = 4e-12
 Identities = 17/75 (22%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLC 571
           +C +C + FS    +T H++ H G K   CD+C ++F+       H  +   +    D  
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64

Query: 572 TKEFSRKGRLTEHMK 586
            +  S+   L   + 
Sbjct: 65  EELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 61.4 bits (150), Expect = 4e-12
 Identities = 16/76 (21%), Positives = 33/76 (43%), Gaps = 1/76 (1%)

Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDL 354
           ++C +C + F R  +LT H++ H G K   C +C ++F+       H  +   +    D 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63

Query: 355 CSKEFSCKRYVTEHMK 370
             +  S   ++   + 
Sbjct: 64  VEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 57.1 bits (139), Expect = 1e-10
 Identities = 17/76 (22%), Positives = 36/76 (47%), Gaps = 1/76 (1%)

Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNL 435
           ++C +C++ +S   +LT H++ H G K   C +C ++F+R      H  +   +    + 
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDK 63

Query: 436 CSKEFSCKSHLKEHMQ 451
             +  S   HL+  + 
Sbjct: 64  VEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 57.1 bits (139), Expect = 1e-10
 Identities = 18/103 (17%), Positives = 36/103 (34%), Gaps = 28/103 (27%)

Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVL 246
           ++C +C + FS   +LT H++ H  E  + CD                           +
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACD---------------------------I 36

Query: 247 CSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQ 289
           C ++F+R      H  +   +    +   +  S   HL+  + 
Sbjct: 37  CGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 56.4 bits (137), Expect = 2e-10
 Identities = 18/73 (24%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLC 382
           +C +C + FS   +LT H++ H G K   CD+C ++F+       H  +   +    D  
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKV 64

Query: 383 LKEYSNKIYLTEH 395
            +  S   +L   
Sbjct: 65  EELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 49.0 bits (118), Expect = 8e-08
 Identities = 15/50 (30%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLH 588
           +C +C + FS    LT H++ H G + + CD+C ++F+R      H  + 
Sbjct: 5   QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 69.4 bits (171), Expect = 5e-15
 Identities = 27/79 (34%), Positives = 38/79 (48%), Gaps = 2/79 (2%)

Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCN 191
           + C +C K F     L+ H+ +H   +   C  C K F  KS + +H   H G K +KC 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 192 LCSKEFSSKSYLTEHMKLH 210
           +C K FS  S L  H + H
Sbjct: 62  VCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 67.1 bits (165), Expect = 3e-14
 Identities = 30/80 (37%), Positives = 41/80 (51%), Gaps = 2/80 (2%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVL 327
            C +C K F   S L  H+ +H     Y C  C K F++K ++ KH  +H G K +KC +
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 328 CSKEFSSKSYLTEHMKLHQG 347
           C K FS  S L  H + H G
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 64.8 bits (159), Expect = 2e-13
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNL 462
            C +C K F R   L+ H+ +H   +   C  C K F  KS +K+H  +H G   +KC +
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 463 CSKEFYRKQNLTKHMKLHQG 482
           C K F +  NL  H + H G
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 64.4 bits (158), Expect = 3e-13
 Identities = 28/80 (35%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG-ITYKCDL 300
            C +C K F R   L+ H+ +H   +   C  C K F  KS +K+H  +H G   +KC +
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 301 CSKEFYRKQNLTKHMKVHQG 320
           C K F +  NL  H + H G
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 64.0 bits (157), Expect = 4e-13
 Identities = 29/81 (35%), Positives = 42/81 (51%), Gaps = 2/81 (2%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCV 164
           + C +C K +    TL+ H+ +H   R Y C  C K F  K  + +H  +H G K +KC 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 165 LCSKEFSSKSYLTEHMKRHQG 185
           +C K FS  S L  H ++H G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 62.1 bits (152), Expect = 2e-12
 Identities = 26/82 (31%), Positives = 40/82 (48%), Gaps = 2/82 (2%)

Query: 457 TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KC 514
           ++ C +C K F R   L+ H+ +H   +   C  C K F  K  + +H  +H G K  KC
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 515 DLCSKEFSCKRSVTEHMKLHLG 536
            +C K FS   ++  H + H G
Sbjct: 61  QVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 61.3 bits (150), Expect = 4e-12
 Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 2/80 (2%)

Query: 295 TYKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK-NKC 352
           ++ C +C K F R   L+ H+ +H   +   C  C K F  KS + +H  +H G K +KC
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 353 DLCSKEFSCKRYVTEHMKLH 372
            +C K FS    +  H + H
Sbjct: 61  QVCGKAFSQSSNLITHSRKH 80

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 58.6 bits (143), Expect = 3e-11
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 214 TYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKC 271
           ++ C +C K +     L+ HL +H   +   C  C K F +K  + +H  +H G K +KC
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 272 NLCSKEFSCKSHLKEHMQVHQG 293
            +C K FS  S+L  H + H G
Sbjct: 61  QVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 58.6 bits (143), Expect = 3e-11
 Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 2/82 (2%)

Query: 376 TYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKC 433
           ++ C +C K +     L+ HL +H   +   C  C K F +K  + +H  +H G K +KC
Sbjct: 1   SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC 60

Query: 434 NLCSKEFSCKSHLKEHMQVHQG 455
            +C K FS  S+L  H + H G
Sbjct: 61  QVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 57.4 bits (140), Expect = 8e-11
 Identities = 27/81 (33%), Positives = 40/81 (49%), Gaps = 2/81 (2%)

Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCV 245
           + C +C K F   S L+ H+ +H     Y C  C K +  K  + +H  +H G K +KC 
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 246 LCSKEFSRKRRLTEHMKLHLG 266
           +C K FS+   L  H + H G
Sbjct: 62  VCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 57.0 bits (139), Expect = 1e-10
 Identities = 24/80 (30%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDL 570
            C +C K F    +++ H+ +H   +   C  C K F  K  + +H  +H G + +KC +
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 571 CTKEFSRKGRLTEHMKLHLG 590
           C K FS+   L  H + H G
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 68.7 bits (169), Expect = 1e-14
 Identities = 27/78 (34%), Positives = 35/78 (44%), Gaps = 4/78 (5%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKNK---C 325
            C +C K F    HL  H   H G   Y C +C   F RK  ++ H++ H G   K   C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 326 VLCSKEFSSKSYLTEHMK 343
             C K FS   +L  H+K
Sbjct: 69  QSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 66.7 bits (164), Expect = 6e-14
 Identities = 27/78 (34%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKKK---C 487
            C +C K F    HL  H   H G   Y C +C   F RK  ++ H++ H G   K   C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 488 DLCSKEFSTKCSLTEHMK 505
             C K FS    L  H+K
Sbjct: 69  QSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 66.0 bits (162), Expect = 1e-13
 Identities = 24/80 (30%), Positives = 37/80 (46%), Gaps = 4/80 (5%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKNK--- 162
             C++C K +   + L  H   H G + Y C +C   F  K  ++ H++ H G   K   
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 163 CVLCSKEFSSKSYLTEHMKR 182
           C  C K FS   +L  H+K+
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQ 87

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 66.0 bits (162), Expect = 1e-13
 Identities = 25/78 (32%), Positives = 32/78 (41%), Gaps = 4/78 (5%)

Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT---YKC 460
            C +C K F     L  H   H G K   C +C   F  K  +  H++ H G     Y C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 461 NLCSKEFYRKQNLTKHMK 478
             C K F R  +L  H+K
Sbjct: 69  QSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 65.6 bits (161), Expect = 2e-13
 Identities = 28/85 (32%), Positives = 35/85 (41%), Gaps = 5/85 (5%)

Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT---YKC 298
            C +C K F     L  H   H G K   C +C   F  K  +  H++ H G     Y C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 299 DLCSKEFYRKQNLTKHMK-VHQGMK 322
             C K F R  +L  H+K VH G  
Sbjct: 69  QSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 63.3 bits (155), Expect = 1e-12
 Identities = 24/79 (30%), Positives = 36/79 (45%), Gaps = 4/79 (5%)

Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIKNK--- 351
             C++C K F    +L +H   H G K   C +C   F  K  ++ H++ H G   K   
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 352 CDLCSKEFSCKRYVTEHMK 370
           C  C K FS   ++  H+K
Sbjct: 68  CQSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 62.1 bits (152), Expect = 2e-12
 Identities = 24/79 (30%), Positives = 34/79 (43%), Gaps = 4/79 (5%)

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKKK--- 513
             C +C K F    +L +H   H G K   C +C   F  K  ++ H++ H G   K   
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 514 CDLCSKEFSCKRSVTEHMK 532
           C  C K FS    +  H+K
Sbjct: 68  CQSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 61.4 bits (150), Expect = 4e-12
 Identities = 24/78 (30%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH---QEITYKC 217
            C +C K F    +L  H   H G K Y C +C   F  K  ++ H++ H       Y C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 218 DLCLKEYSNKIYLTEHLK 235
             C K +S   +L  H+K
Sbjct: 69  QSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 61.4 bits (150), Expect = 5e-12
 Identities = 29/84 (34%), Positives = 41/84 (48%), Gaps = 5/84 (5%)

Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKNK--- 432
             C++C K + +  +L  H   H G K   C +C   F RK R++ H++ H G   K   
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 433 CNLCSKEFSCKSHLKEHMQ-VHQG 455
           C  C K FS   HL  H++ VH G
Sbjct: 68  CQSCGKGFSRPDHLNGHIKQVHSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 60.2 bits (147), Expect = 1e-11
 Identities = 31/117 (26%), Positives = 40/117 (34%), Gaps = 33/117 (28%)

Query: 183 HQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGI 240
             G     C +C K F    +L  H   H  E  Y C                       
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCP---------------------- 39

Query: 241 KNKCVLCSKEFSRKRRLTEHMKLHLGIKNK---CNLCSKEFSCKSHLKEHMQ-VHQG 293
                +C   F RK R++ H++ H G   K   C  C K FS   HL  H++ VH G
Sbjct: 40  -----VCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 59.0 bits (144), Expect = 3e-11
 Identities = 25/78 (32%), Positives = 34/78 (43%), Gaps = 4/78 (5%)

Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR---YKC 568
            C++C K F     +  H   H G K   C +C   F  K  ++ H++ H G     Y C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 569 DLCTKEFSRKGRLTEHMK 586
             C K FSR   L  H+K
Sbjct: 69  QSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.7 bits (125), Expect = 1e-08
 Identities = 23/78 (29%), Positives = 33/78 (42%), Gaps = 4/78 (5%)

Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLH---QEITYKC 379
            C +C K F    +L  H   H G K   C +C   F  K  ++ H++ H       Y C
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYIC 68

Query: 380 DLCLKEYSNKIYLTEHLK 397
             C K +S   +L  H+K
Sbjct: 69  QSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 47.1 bits (113), Expect = 5e-07
 Identities = 18/52 (34%), Positives = 27/52 (51%), Gaps = 1/52 (1%)

Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
            C++C K F   + L  H   H G + Y C +C   F RK R++ H++ H G
Sbjct: 9   ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDG 60

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 61.4 bits (150), Expect = 4e-12
 Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 7/83 (8%)

Query: 419 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-----YKCNLCSKEFYRKQN 472
                + H G K   C+ C K F  K  L  H + +         + C+ C K F R+  
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 473 LTKHMKLHQGIKK-KCDLCSKEF 494
           + +H     G    + +      
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 17/84 (20%), Positives = 27/84 (32%), Gaps = 7/84 (8%)

Query: 121 TLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-----KCVLCSKEFSSKS 174
           +     + H G + Y C  C K F  K+ L  H K +           C  C K F+ ++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 175 YLTEHMKRHQGIK-YKCNLCSKEF 197
            +  H     G    +        
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 7/83 (8%)

Query: 257 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-----YKCDLCSKEFYRKQN 310
                + H G K   C+ C K F  K  L  H + +         + C  C K F R+  
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 311 LTKHMKVHQGMKN-KCVLCSKEF 332
           + +H     G    +        
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 55.2 bits (134), Expect = 5e-10
 Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 7/84 (8%)

Query: 445 HLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-----KCDLCSKEFSTKC 498
                 + H G   Y C+ C K F +KQ L  H K +           C  C K F+ + 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 499 SLTEHMKLHQGIKK-KCDLCSKEF 521
           ++  H     G    + +      
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 52.5 bits (127), Expect = 5e-09
 Identities = 17/83 (20%), Positives = 28/83 (33%), Gaps = 7/83 (8%)

Query: 230 LTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-----KCNLCSKEFSCKSH 283
                + H G K   C  C K F +K+ L  H K +           C+ C K F+ ++ 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 284 LKEHMQVHQG-ITYKCDLCSKEF 305
           +  H     G    + +      
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 18/84 (21%), Positives = 28/84 (33%), Gaps = 7/84 (8%)

Query: 499 SLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-----KCDLCSKEFSTKH 552
           S     + H G K   C  C K F  K+ +  H K +           C  C K F+ ++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 553 TLTEHMKLHQGIR-YKCDLCTKEF 575
           T+  H     G    + +      
Sbjct: 62  TMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 49.4 bits (119), Expect = 6e-08
 Identities = 17/83 (20%), Positives = 26/83 (31%), Gaps = 7/83 (8%)

Query: 176 LTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-----QEITYKCDLCLKEYSNKIY 229
                + H G K Y C+ C K F  K  L  H K +         + C  C K ++ +  
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 230 LTEHLKLHQGIKN-KCVLCSKEF 251
           +  H     G    +        
Sbjct: 63  MARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 49.4 bits (119), Expect = 6e-08
 Identities = 16/82 (19%), Positives = 24/82 (29%), Gaps = 7/82 (8%)

Query: 310 NLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIKN-----KCDLCSKEFSCKR 363
           +     + H G K   C  C K F  K  L  H K +           C  C K F+ + 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 364 YVTEHMKLHQ-EITYKCDLCLK 384
            +  H          + +    
Sbjct: 62  TMARHADNCAGPDGVEGENSGP 83

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 48.3 bits (116), Expect = 1e-07
 Identities = 19/71 (26%), Positives = 25/71 (35%), Gaps = 6/71 (8%)

Query: 526 SVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-----YKCDLCTKEFSRKG 579
           S     + H G K   C  C K F  K  L  H K +         + C  C K F+R+ 
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 580 RLTEHMKLHLG 590
            +  H     G
Sbjct: 62  TMARHADNCAG 72

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 48.3 bits (116), Expect = 2e-07
 Identities = 14/70 (20%), Positives = 21/70 (30%), Gaps = 6/70 (8%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-----YKCDLCSKEFSCKRYLTEHMKVHQGMKN 161
           Y C  C K +  K  L  H K +         + C  C K F+ +  +  H     G   
Sbjct: 16  YACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDG 75

Query: 162 -KCVLCSKEF 170
            +        
Sbjct: 76  VEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 43.7 bits (104), Expect = 6e-06
 Identities = 17/82 (20%), Positives = 24/82 (29%), Gaps = 7/82 (8%)

Query: 366 TEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-----KCVLCSKEFSRKRRL 419
               + H  E  Y C  C K +  K  L  H K +           C  C K F+R+  +
Sbjct: 4   GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTM 63

Query: 420 TEHMKLHLGIKN-KCNLCSKEF 440
             H     G    +        
Sbjct: 64  ARHADNCAGPDGVEGENSGPSS 85

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 60.6 bits (148), Expect = 8e-12
 Identities = 29/80 (36%), Positives = 40/80 (50%), Gaps = 4/80 (5%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KC 325
               C K ++  SHLK H++ H G   Y CD   C  +F R   LT+H + H G +  +C
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68

Query: 326 VLCSKEFSSKSYLTEHMKLH 345
             C + FS   +L  HMK H
Sbjct: 69  QKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 60.2 bits (147), Expect = 1e-11
 Identities = 28/80 (35%), Positives = 39/80 (48%), Gaps = 4/80 (5%)

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KC 487
               C K ++  SHLK H++ H G   Y C+   C  +F R   LT+H + H G +  +C
Sbjct: 9   DYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQC 68

Query: 488 DLCSKEFSTKCSLTEHMKLH 507
             C + FS    L  HMK H
Sbjct: 69  QKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 57.5 bits (140), Expect = 1e-10
 Identities = 24/82 (29%), Positives = 38/82 (46%), Gaps = 4/82 (4%)

Query: 133 RYKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVL--CSKEFSSKSYLTEHMKRHQGIK-Y 188
                 C K ++   +L  H++ H G K   C    C  +F+    LT H ++H G + +
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66

Query: 189 KCNLCSKEFSSKSYLTEHMKLH 210
           +C  C + FS   +L  HMK H
Sbjct: 67  QCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 56.8 bits (138), Expect = 2e-10
 Identities = 27/81 (33%), Positives = 38/81 (46%), Gaps = 4/81 (4%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDL--CSKEFSCKRYLTEHMKVHQGMKN-K 162
                C K Y+    L  H++ H G + Y CD   C  +F+    LT H + H G +  +
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67

Query: 163 CVLCSKEFSSKSYLTEHMKRH 183
           C  C + FS   +L  HMKRH
Sbjct: 68  CQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 56.4 bits (137), Expect = 2e-10
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 237 HQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQ 292
                      C K +++   L  H++ H G K   C+   C  +F+    L  H + H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 293 GIT-YKCDLCSKEFYRKQNLTKHMKVH 318
           G   ++C  C + F R  +L  HMK H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 55.2 bits (134), Expect = 5e-10
 Identities = 23/87 (26%), Positives = 36/87 (41%), Gaps = 5/87 (5%)

Query: 399 HQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNL--CSKEFSCKSHLKEHMQVHQ 454
                      C K +++   L  H++ H G K   C+   C  +F+    L  H + H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 455 GIT-YKCNLCSKEFYRKQNLTKHMKLH 480
           G   ++C  C + F R  +L  HMK H
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 52.1 bits (126), Expect = 6e-09
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 507 HQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFSTKHTLTEHMKLHQ 562
                      C K ++    +  H++ H G K   CD   C  +F+    LT H + H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 563 GIR-YKCDLCTKEFSRKGRLTEHMKLHL 589
           G R ++C  C + FSR   L  HMK H 
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 52.1 bits (126), Expect = 8e-09
 Identities = 26/89 (29%), Positives = 39/89 (43%), Gaps = 5/89 (5%)

Query: 182 RHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDL--CLKEYSNKIYLTEHLKLH 237
           +           C K ++  S+L  H++ H  E  Y CD   C  +++    LT H + H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 238 QGIKN-KCVLCSKEFSRKRRLTEHMKLHL 265
            G +  +C  C + FSR   L  HMK H 
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 50.2 bits (121), Expect = 3e-08
 Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 4/82 (4%)

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDL--CSKEFSTKCSLTEHMKLHQGIKK-K 513
                C K + +  +L  H++ H G K   CD   C  +F+    LT H + H G +  +
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQ 67

Query: 514 CDLCSKEFSCKRSVTEHMKLHL 535
           C  C + FS    +  HMK H 
Sbjct: 68  CQKCDRAFSRSDHLALHMKRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 42.9 bits (102), Expect = 1e-05
 Identities = 24/88 (27%), Positives = 37/88 (42%), Gaps = 5/88 (5%)

Query: 345 HQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDL--CLKEYSNKIYLTEHLKLHQ 400
                      C K ++   ++  H++ H  E  Y CD   C  +++    LT H + H 
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

Query: 401 GIKN-KCVLCSKEFSRKRRLTEHMKLHL 427
           G +  +C  C + FSR   L  HMK H 
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMKRHF 89

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 40.2 bits (95), Expect = 1e-04
 Identities = 30/142 (21%), Positives = 42/142 (29%), Gaps = 55/142 (38%)

Query: 313 KHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLH 372
           K    H         C K ++  S+L  H++ H G                         
Sbjct: 1   KRTATH---TCDYAGCGKTYTKSSHLKAHLRTHTG------------------------- 32

Query: 373 QEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKN- 431
            E  Y CD                            C  +F+R   LT H + H G +  
Sbjct: 33  -EKPYHCDW-------------------------DGCGWKFARSDELTRHYRKHTGHRPF 66

Query: 432 KCNLCSKEFSCKSHLKEHMQVH 453
           +C  C + FS   HL  HM+ H
Sbjct: 67  QCQKCDRAFSRSDHLALHMKRH 88

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 60.2 bits (147), Expect = 8e-12
 Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 5/71 (7%)

Query: 257 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT---YKCDLCSKEFYRKQNLT 312
                + H G K  +C +C   F+    +K H+          + C  C     RK +L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 313 KHM-KVHQGMK 322
            H+ K H    
Sbjct: 63  VHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 58.3 bits (142), Expect = 3e-11
 Identities = 16/71 (22%), Positives = 25/71 (35%), Gaps = 5/71 (7%)

Query: 419 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT---YKCNLCSKEFYRKQNLT 474
                + H G K  +C +C   F+    +K H+          + C  C     RK +L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 475 KHM-KLHQGIK 484
            H+ K H    
Sbjct: 63  VHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.8 bits (138), Expect = 1e-10
 Identities = 15/72 (20%), Positives = 23/72 (31%), Gaps = 5/72 (6%)

Query: 283 HLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKNK---CVLCSKEFSSKSYL 338
                 + H G   Y+C +C   F +   +  H+            C  C    + KS L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 339 TEHM-KLHQGIK 349
             H+ K H    
Sbjct: 62  GVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.4 bits (137), Expect = 2e-10
 Identities = 14/72 (19%), Positives = 22/72 (30%), Gaps = 5/72 (6%)

Query: 445 HLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKKK---CDLCSKEFSTKCSL 500
                 + H G   Y+C +C   F +   +  H+            C  C    + K  L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 501 TEHM-KLHQGIK 511
             H+ K H    
Sbjct: 62  GVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.2 bits (134), Expect = 4e-10
 Identities = 13/67 (19%), Positives = 25/67 (37%), Gaps = 4/67 (5%)

Query: 121 TLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKNK---CVLCSKEFSSKSYL 176
           +     + H G + Y+C +C   F+    +  H+            C  C    + KS L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 177 TEHMKRH 183
             H+++ 
Sbjct: 62  GVHLRKQ 68

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 55.2 bits (134), Expect = 4e-10
 Identities = 13/64 (20%), Positives = 24/64 (37%), Gaps = 4/64 (6%)

Query: 149 LTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKRHQGIK---YKCNLCSKEFSSKSYLT 204
                + H G K  +C +C   F+    +  H+ +        + C  C    + KS L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 205 EHMK 208
            H++
Sbjct: 63  VHLR 66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 51.8 bits (125), Expect = 7e-09
 Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 4/61 (6%)

Query: 530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR---YKCDLCTKEFSRKGRLTEHM 585
             + H G K  +C +C   F+   T+  H+          + C  C    +RK  L  H+
Sbjct: 6   SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65

Query: 586 K 586
           +
Sbjct: 66  R 66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 51.0 bits (123), Expect = 1e-08
 Identities = 11/65 (16%), Positives = 23/65 (35%), Gaps = 4/65 (6%)

Query: 472 NLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKKK---CDLCSKEFSCKRSV 527
           +     + H G K  +C +C   F+   ++  H+            C  C    + K  +
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 528 TEHMK 532
             H++
Sbjct: 62  GVHLR 66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 11/65 (16%), Positives = 22/65 (33%), Gaps = 4/65 (6%)

Query: 310 NLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKLHQGIKNK---CDLCSKEFSCKRYV 365
           +     + H G K  +C +C   F+    +  H+            C  C    + K  +
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 366 TEHMK 370
             H++
Sbjct: 62  GVHLR 66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 12/58 (20%), Positives = 21/58 (36%), Gaps = 4/58 (6%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR---YKCDLCSKEFSCKRYLTEHM-KVHQGMK 160
           Y+C +C   ++   T+  H+          + C  C    + K  L  H+ K H    
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.7 bits (117), Expect = 8e-08
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 5/69 (7%)

Query: 230 LTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKNK---CNLCSKEFSCKSHLK 285
                + H G K  +C +C   F++   +  H+            C  C    + KS L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 286 EHMQ-VHQG 293
            H++  H  
Sbjct: 63  VHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 48.7 bits (117), Expect = 8e-08
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 5/69 (7%)

Query: 392 LTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKNK---CNLCSKEFSCKSHLK 447
                + H G K  +C +C   F++   +  H+            C  C    + KS L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 448 EHMQ-VHQG 455
            H++  H  
Sbjct: 63  VHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.9 bits (115), Expect = 2e-07
 Identities = 13/65 (20%), Positives = 23/65 (35%), Gaps = 4/65 (6%)

Query: 499 SLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKNK---CDLCSKEFSTKHTL 554
           S     + H G K  +C +C   F+   ++  H+            C  C    + K  L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 555 TEHMK 559
             H++
Sbjct: 62  GVHLR 66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 16/71 (22%), Positives = 24/71 (33%), Gaps = 5/71 (7%)

Query: 176 LTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH---QEITYKCDLCLKEYSNKIYLT 231
                + H G K Y+C +C   F+    +  H+          + C  C    + K  L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 232 EHL-KLHQGIK 241
            HL K H    
Sbjct: 63  VHLRKQHSYSG 73

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 12/64 (18%), Positives = 22/64 (34%), Gaps = 4/64 (6%)

Query: 203 LTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNK---CVLCSKEFSRKRRLT 258
                + H  E  Y+C +C   ++    +  H+            C  C    +RK  L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 259 EHMK 262
            H++
Sbjct: 63  VHLR 66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 12/61 (19%), Positives = 22/61 (36%), Gaps = 4/61 (6%)

Query: 368 HMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKNK---CVLCSKEFSRKRRLTEHM 423
             + H  E  Y+C +C   ++    +  H+            C  C    +RK  L  H+
Sbjct: 6   SGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHL 65

Query: 424 K 424
           +
Sbjct: 66  R 66

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 58.2 bits (142), Expect = 3e-11
 Identities = 24/68 (35%), Positives = 32/68 (47%), Gaps = 2/68 (2%)

Query: 419 LTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKH 476
              H  +    K  KC+ C   F  K +L  H  VH G   Y+CN+C  +F R  NL  H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 477 MKLHQGIK 484
            ++H G K
Sbjct: 65  TRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 58.2 bits (142), Expect = 3e-11
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 2/70 (2%)

Query: 282 SHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLT 339
            H   H  +      YKCD C   F  K NL  H  VH G K  +C +C  +F+  + L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 340 EHMKLHQGIK 349
            H ++H G K
Sbjct: 63  THTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 57.5 bits (140), Expect = 6e-11
 Identities = 22/70 (31%), Positives = 33/70 (47%), Gaps = 2/70 (2%)

Query: 444 SHLKEHMQVHQGI-TYKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLT 501
            H   H  +      YKC+ C   F  K NL  H  +H G K  +C++C  +F+   +L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 502 EHMKLHQGIK 511
            H ++H G K
Sbjct: 63  THTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 55.5 bits (135), Expect = 3e-10
 Identities = 20/70 (28%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 174 SYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLT 231
            +   H       K YKC+ C   F  K  L  H  +H  E  Y+C++C  +++    L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 232 EHLKLHQGIK 241
            H ++H G K
Sbjct: 63  THTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 55.2 bits (134), Expect = 4e-10
 Identities = 23/70 (32%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 120 HTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLT 177
           H    H  +    + YKCD C   F  K  L  H  VH G K  +C +C  +F+  + L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 178 EHMKRHQGIK 187
            H + H G K
Sbjct: 63  THTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 52.8 bits (128), Expect = 2e-09
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 229 YLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKE 286
           +   H  +    K  KC  C   F  K  L  H  +H G K  +CN+C  +F+  ++LK 
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 287 HMQVHQG 293
           H ++H G
Sbjct: 64  HTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 52.8 bits (128), Expect = 2e-09
 Identities = 21/67 (31%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 391 YLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKE 448
           +   H  +    K  KC  C   F  K  L  H  +H G K  +CN+C  +F+  ++LK 
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 449 HMQVHQG 455
           H ++H G
Sbjct: 64  HTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 51.3 bits (124), Expect = 9e-09
 Identities = 21/65 (32%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 528 TEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHM 585
             H  +    K  KCD C   F  K  L  H  +H G + Y+C++C  +F+R   L  H 
Sbjct: 6   HHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHT 65

Query: 586 KLHLG 590
           ++H G
Sbjct: 66  RIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 50.9 bits (123), Expect = 1e-08
 Identities = 20/69 (28%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 472 NLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTE 529
           +   H  +    K  KCD C   F  K +L  H  +H G K  +C++C  +F+   ++  
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 530 HMKLHLGIK 538
           H ++H G K
Sbjct: 64  HTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 50.1 bits (121), Expect = 2e-08
 Identities = 20/55 (36%), Positives = 30/55 (54%), Gaps = 1/55 (1%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
           YKCD C   + YK  L  H  +H G + Y+C++C  +F+    L  H ++H G K
Sbjct: 18  YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 45.9 bits (110), Expect = 8e-07
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 2/70 (2%)

Query: 336 SYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQ-EITYKCDLCLKEYSNKIYLT 393
            +   H  +    K  KCD C   F  K  +  H  +H  E  Y+C++C  +++    L 
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 394 EHLKLHQGIK 403
            H ++H G K
Sbjct: 63  THTRIHSGEK 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 42.4 bits (101), Expect = 1e-05
 Identities = 23/69 (33%), Positives = 32/69 (46%), Gaps = 6/69 (8%)

Query: 368 HMKLHQEIT-----YKCDLCLKEYSNKIYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTE 421
           H   H  +T     YKCD C   +  K  L  H  +H G K  +C +C  +F+R   L  
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 422 HMKLHLGIK 430
           H ++H G K
Sbjct: 64  HTRIHSGEK 72

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.7 bits (138), Expect = 9e-11
 Identities = 20/55 (36%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGI-TYKCDLCSKEFYRKQNLTKHMKVHQGMKN 323
           KC+ CS   S K+ L+ H ++H     +KC+ CS +  +  NL+KHMK   G  +
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 21/54 (38%), Positives = 30/54 (55%), Gaps = 1/54 (1%)

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGI-TYKCNLCSKEFYRKQNLTKHMKLHQGIK 484
           KC+ CS   S K+ L+ H ++H     +KCN CS +  +  NL+KHMK   G  
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 55.2 bits (134), Expect = 3e-10
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIK 511
            KC+ CS     K  L  H ++H   +  KC+ CS +     +L++HMK   G  
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 54.8 bits (133), Expect = 5e-10
 Identities = 20/50 (40%), Positives = 27/50 (54%), Gaps = 1/50 (2%)

Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
           KC  CS   SSK+ L  H + H   + +KCN CS +    S L++HMK  
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN 161
            KC  CS   S K  L  H ++H   R +KC+ CS +      L++HMK   G  +
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 52.1 bits (126), Expect = 5e-09
 Identities = 18/52 (34%), Positives = 28/52 (53%), Gaps = 1/52 (1%)

Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
           KC  CS   S+K  L  H ++H   R +KC+ C+ +  +   L++HMK   G
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 51.7 bits (125), Expect = 6e-09
 Identities = 18/56 (32%), Positives = 25/56 (44%), Gaps = 1/56 (1%)

Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIKN 350
            KC  CS     K  L  H ++H   +  KC  CS +    S L++HMK   G  +
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
           KC  CS   S K  L  H ++H   +  KCN CS +    S+L +HM+   G
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 19/52 (36%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 455
           KC  CS   S K  L  H ++H   +  KCN CS +    S+L +HM+   G
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.2 bits (121), Expect = 2e-08
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK 187
            KC  CS   S K  L  H ++H   +  KC  CS +    S L++HMK+  G  
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM 64

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.0 bits (118), Expect = 6e-08
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN 242
            KC+ CS   SSK+ L  H ++H  +  +KC+ C  +      L++H+K   G  +
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.0 bits (118), Expect = 6e-08
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 1/55 (1%)

Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN 539
           KC  CS   S+K +L  H ++H   +  KC+ CS +     ++++HMK   G  +
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 45.2 bits (108), Expect = 1e-06
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 1/50 (2%)

Query: 324 KCVLCSKEFSSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH 372
           KC  CS   SSK+ L  H ++H   +  KC+ CS +      +++HMK  
Sbjct: 11  KCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKF 60

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 41.3 bits (98), Expect = 3e-05
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 215 YKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN 269
            KC  C    S+K  L  H ++H   +  KC  CS +  +   L++HMK   G  +
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 41.3 bits (98), Expect = 3e-05
 Identities = 17/56 (30%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN 431
            KC  C    S+K  L  H ++H   +  KC  CS +  +   L++HMK   G  +
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS 65

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 57.0 bits (138), Expect = 1e-10
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 4/53 (7%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT----YKCDLCSKEFYRKQNLTKHMKVH 318
           +C +C      K+ L  H + H        + C+ C K F +  ++  H    
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 55.9 bits (135), Expect = 2e-10
 Identities = 11/60 (18%), Positives = 19/60 (31%), Gaps = 4/60 (6%)

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT----YKCNLCSKEFYRKQNLTKHMKLHQGIKKKC 487
           +C +C      K+ L  H + H        + C  C K F +  ++  H           
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLA 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 53.9 bits (130), Expect = 1e-09
 Identities = 12/61 (19%), Positives = 19/61 (31%), Gaps = 4/61 (6%)

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK----KCDLCSKEFSTKCSLTEHMKLHQGIKKK 513
            +C +C     +K +L  H + H          C+ C K F    S+  H          
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 514 C 514
            
Sbjct: 68  A 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 11/53 (20%), Positives = 20/53 (37%), Gaps = 4/53 (7%)

Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR----YKCDLCTKEFSRKGRLTEHMKLH 588
           +C++C      K +L  H + H        + C+ C K F +   +  H    
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 53.6 bits (129), Expect = 2e-09
 Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 4/54 (7%)

Query: 296 YKCDLCSKEFYRKQNLTKHMKVH---QGMKN-KCVLCSKEFSSKSYLTEHMKLH 345
            +C++C     +K +L  H + H          C  C K F     +  H    
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 52.4 bits (126), Expect = 4e-09
 Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 4/53 (7%)

Query: 162 KCVLCSKEFSSKSYLTEHMKRHQGIK----YKCNLCSKEFSSKSYLTEHMKLH 210
           +C +C      K+ L  H ++H        + C  C K F     +  H    
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 52.4 bits (126), Expect = 5e-09
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 4/54 (7%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR----YKCDLCSKEFSCKRYLTEHMKVH 156
            +C++C      K +L  H + H        + C+ C K F     +  H    
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 50.1 bits (120), Expect = 3e-08
 Identities = 14/53 (26%), Positives = 19/53 (35%), Gaps = 4/53 (7%)

Query: 486 KCDLCSKEFSTKCSLTEHMKLHQGIKK----KCDLCSKEFSCKRSVTEHMKLH 534
           +C++C      K SL  H + H          C+ C K F    SV  H    
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.8 bits (114), Expect = 2e-07
 Identities = 11/54 (20%), Positives = 19/54 (35%), Gaps = 4/54 (7%)

Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQEIT----YKCDLCLKEYSNKIYLTEHLKLH 237
            +C +C      K+ L  H + H E      + C+ C K +     +  H    
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 42.4 bits (100), Expect = 2e-05
 Identities = 11/54 (20%), Positives = 17/54 (31%), Gaps = 4/54 (7%)

Query: 377 YKCDLCLKEYSNKIYLTEHLKLHQGIKN----KCVLCSKEFSRKRRLTEHMKLH 426
            +C++C      K  L  H + H          C  C K F +   +  H    
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 41.2 bits (97), Expect = 4e-05
 Identities = 10/53 (18%), Positives = 19/53 (35%), Gaps = 4/53 (7%)

Query: 351 KCDLCSKEFSCKRYVTEHMKLHQEIT----YKCDLCLKEYSNKIYLTEHLKLH 399
           +C++C      K  +  H + H E      + C+ C K +     +  H    
Sbjct: 9   QCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 18/55 (32%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGI---TYKCNLCSKEFYRKQNLTKHMKLHQGI 483
           +C +CS+ ++  S+   H           Y C  C KEF RK N+T H+K+   I
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 56.4 bits (137), Expect = 1e-10
 Identities = 17/55 (30%), Positives = 27/55 (49%), Gaps = 3/55 (5%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGI---TYKCDLCSKEFYRKQNLTKHMKVHQGM 321
           +C +CS+ ++  S+   H           Y C  C KEF RK N+T H+K+   +
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.2 bits (126), Expect = 4e-09
 Identities = 17/55 (30%), Positives = 29/55 (52%), Gaps = 3/55 (5%)

Query: 162 KCVLCSKEFSSKSYLTEHM--KRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQEI 213
           +C +CS+ ++  S    H      + +K Y C  C KEF+ K  +T H+K+  +I
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 51.8 bits (125), Expect = 6e-09
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 296 YKCDLCSKEFYRKQNLTKHMKV--HQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGI 348
           Y+C +CS+ +    N  +H      + +K   C  C KEF+ K  +T H+K+   I
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 51.4 bits (124), Expect = 7e-09
 Identities = 17/56 (30%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 458 YKCNLCSKEFYRKQNLTKHM--KLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGI 510
           Y+C +CS+ +    N  +H      + +K   C  C KEF+ K ++T H+K+   I
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.5 bits (114), Expect = 1e-07
 Identities = 16/56 (28%), Positives = 29/56 (51%), Gaps = 3/56 (5%)

Query: 107 YKCDLCSKEYSYKHTLTEHM--KLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGM 159
           Y+C +CS+ Y++      H      + ++ Y C  C KEF+ K  +T H+K+   +
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 47.5 bits (114), Expect = 2e-07
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 540 KCDLCSKEFSTKHTLTEHM--KLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLGI 591
           +C +CS+ ++       H      + ++ Y C  C KEF+RK  +T H+K+   I
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 16/55 (29%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 324 KCVLCSKEFSSKSYLTEHM--KLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQEI 375
           +C +CS+ ++  S    H      + +K   C  C KEF+ K  +T H+K+  +I
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.4 bits (98), Expect = 3e-05
 Identities = 15/55 (27%), Positives = 28/55 (50%), Gaps = 3/55 (5%)

Query: 486 KCDLCSKEFSTKCSLTEHM--KLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGI 537
           +C +CS+ ++   +   H      + +K   C  C KEF+ K ++T H+K+   I
Sbjct: 12  RCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 41.0 bits (97), Expect = 4e-05
 Identities = 18/81 (22%), Positives = 29/81 (35%), Gaps = 26/81 (32%)

Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVL 246
           Y+C +CS+ ++  S    H                               + +K   C  
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSH-------------------------KRNVKVYPCPF 45

Query: 247 CSKEFSRKRRLTEHMKLHLGI 267
           C KEF+RK  +T H+K+   I
Sbjct: 46  CFKEFTRKDNMTAHVKIIHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 39.1 bits (92), Expect = 2e-04
 Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 3/56 (5%)

Query: 377 YKCDLCLKEYSNKIYLTEHL--KLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGI 429
           Y+C +C + Y++      H      + +K   C  C KEF+RK  +T H+K+   I
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI 66

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 55.0 bits (133), Expect = 4e-10
 Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 4/72 (5%)

Query: 439 EFSCKSHLKEHMQVHQGITYKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFS 495
           E    ++L  ++       Y C +  C + F R   LT+H+++H G K  +C +C + FS
Sbjct: 2   EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

Query: 496 TKCSLTEHMKLH 507
               LT H++ H
Sbjct: 61  RSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 52.3 bits (126), Expect = 4e-09
 Identities = 21/72 (29%), Positives = 37/72 (51%), Gaps = 4/72 (5%)

Query: 277 EFSCKSHLKEHMQVHQGITYKCDL--CSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFS 333
           E    ++L  ++       Y C +  C + F R   LT+H+++H G K  +C +C + FS
Sbjct: 2   EPHPMNNLLNYVVPKMR-PYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

Query: 334 SKSYLTEHMKLH 345
              +LT H++ H
Sbjct: 61  RSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 47.3 bits (113), Expect = 3e-07
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 274 CSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVH 318
           C + FS    L  H+++H G   ++C +C + F R  +LT H++ H
Sbjct: 27  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 247 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVH 291
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H
Sbjct: 27  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 46.1 bits (110), Expect = 7e-07
 Identities = 18/46 (39%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 409 CSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVH 453
           C + FSR   LT H+++H G K  +C +C + FS   HL  H++ H
Sbjct: 27  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.8 bits (109), Expect = 8e-07
 Identities = 17/46 (36%), Positives = 28/46 (60%), Gaps = 1/46 (2%)

Query: 544 CSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLH 588
           C + FS    LT H+++H G + ++C +C + FSR   LT H++ H
Sbjct: 27  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 15/46 (32%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 436 CSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLH 480
           C + FS    L  H+++H G   ++C +C + F R  +LT H++ H
Sbjct: 27  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.4 bits (108), Expect = 1e-06
 Identities = 17/46 (36%), Positives = 27/46 (58%), Gaps = 1/46 (2%)

Query: 166 CSKEFSSKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
           C + FS    LT H++ H G K ++C +C + FS   +LT H++ H
Sbjct: 27  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.9 bits (99), Expect = 2e-05
 Identities = 17/53 (32%), Positives = 31/53 (58%), Gaps = 3/53 (5%)

Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVH 156
           Y C +  C + +S    LT H+++H G + ++C +C + FS   +LT H++ H
Sbjct: 20  YACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.5 bits (98), Expect = 3e-05
 Identities = 21/72 (29%), Positives = 35/72 (48%), Gaps = 4/72 (5%)

Query: 196 EFSSKSYLTEHMKLHQEITYKCDL--CLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFS 252
           E    + L  ++       Y C +  C + +S    LT H+++H G K  +C +C + FS
Sbjct: 2   EPHPMNNLLNYVVPK-MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

Query: 253 RKRRLTEHMKLH 264
           R   LT H++ H
Sbjct: 61  RSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.4 bits (90), Expect = 3e-04
 Identities = 20/74 (27%), Positives = 35/74 (47%), Gaps = 8/74 (10%)

Query: 466 EFYRKQNLTKHMKLHQGIKK--KCDL--CSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKE 520
           E +   NL  ++       +   C +  C + FS    LT H+++H G K  +C +C + 
Sbjct: 2   EPHPMNNLLNYVVPKM---RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRN 58

Query: 521 FSCKRSVTEHMKLH 534
           FS    +T H++ H
Sbjct: 59  FSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 20/72 (27%), Positives = 34/72 (47%), Gaps = 4/72 (5%)

Query: 358 EFSCKRYVTEHMKLHQEITYKCDL--CLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFS 414
           E      +  ++       Y C +  C + +S    LT H+++H G K  +C +C + FS
Sbjct: 2   EPHPMNNLLNYVVPK-MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

Query: 415 RKRRLTEHMKLH 426
           R   LT H++ H
Sbjct: 61  RSDHLTTHIRTH 72

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 56.3 bits (135), Expect = 5e-10
 Identities = 19/102 (18%), Positives = 29/102 (28%), Gaps = 8/102 (7%)

Query: 469 RKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSV 527
              +   +  +  G  K +C  CS  + T   LT HM      +            + S 
Sbjct: 3   SGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSK 62

Query: 528 TEHMKLHLGIKN-------KCDLCSKEFSTKHTLTEHMKLHQ 562
                L             KC  C   F +   L+ HM   +
Sbjct: 63  PRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 54.0 bits (129), Expect = 3e-09
 Identities = 18/103 (17%), Positives = 32/103 (31%), Gaps = 8/103 (7%)

Query: 279 SCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSY 337
           S  S  K +  +  G + ++C  CS  +     LT HM      ++           +  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 338 LTEHMKLHQGIKN-------KCDLCSKEFSCKRYVTEHMKLHQ 373
                 L +           KC  C   F   + ++ HM   +
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 50.5 bits (120), Expect = 5e-08
 Identities = 20/103 (19%), Positives = 33/103 (32%), Gaps = 8/103 (7%)

Query: 117 SYKHTLTEHMKLHQG-IRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSY 175
           S   +   +  +  G  +++C  CS  +     LT HM      ++           +  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 176 ------LTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ 211
                 L E   +    K  KC  C   F S   L+ HM   +
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 49.4 bits (117), Expect = 1e-07
 Identities = 18/100 (18%), Positives = 30/100 (30%), Gaps = 8/100 (8%)

Query: 495 STKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHT 553
           S+  S   +  +  G  K +C  CS  +     +T HM      ++           + +
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 554 LTEHMKLHQGIR-------YKCDLCTKEFSRKGRLTEHMK 586
                 L +           KC  C   F     L+ HM 
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 49.0 bits (116), Expect = 2e-07
 Identities = 17/85 (20%), Positives = 26/85 (30%), Gaps = 7/85 (8%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKN----- 161
           ++C  CS  Y     LT HM      R            +        + +         
Sbjct: 20  FRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQK 79

Query: 162 --KCVLCSKEFSSKSYLTEHMKRHQ 184
             KC+ C   F S   L+ HM + +
Sbjct: 80  VLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 48.6 bits (115), Expect = 2e-07
 Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 8/103 (7%)

Query: 230 LTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHM 288
              +  +  G    +C  CS  +     LT HM      ++  +        +       
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66

Query: 289 QVHQGIT-------YKCDLCSKEFYRKQNLTKHMKVHQGMKNK 324
            + +           KC  C   F   Q+L+ HM   +  +  
Sbjct: 67  SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKV 109

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.5 bits (112), Expect = 6e-07
 Identities = 16/98 (16%), Positives = 29/98 (29%), Gaps = 8/98 (8%)

Query: 392 LTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHM 450
              +  +  G    +C  CS  +     LT HM      ++  +        +       
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66

Query: 451 QVHQGIT-------YKCNLCSKEFYRKQNLTKHMKLHQ 481
            + +           KC  C   F   Q+L+ HM   +
Sbjct: 67  SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 47.5 bits (112), Expect = 6e-07
 Identities = 14/98 (14%), Positives = 29/98 (29%), Gaps = 8/98 (8%)

Query: 149 LTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHM 207
              +  +  G    +C  CS  + +   LT HM      +   +        +       
Sbjct: 7   GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKR 66

Query: 208 KLHQ-------EITYKCDLCLKEYSNKIYLTEHLKLHQ 238
            L +       +   KC  C   + +   L+ H+   +
Sbjct: 67  SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 46.7 bits (110), Expect = 1e-06
 Identities = 19/103 (18%), Positives = 30/103 (29%), Gaps = 8/103 (7%)

Query: 414 SRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKE------ 466
           S       +  +  G    +C  CS  +     L  HM          +           
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 467 FYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQ 508
             RK++L +        K  KC  C   F +   L+ HM   +
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.5 bits (107), Expect = 3e-06
 Identities = 18/100 (18%), Positives = 28/100 (28%), Gaps = 8/100 (8%)

Query: 333 SSKSYLTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIY 391
           SS S    +  +  G    +C  CS  +     +T HM                   +  
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 392 LTEHLKLHQGIKN-------KCVLCSKEFSRKRRLTEHMK 424
                 L +           KC+ C   F   + L+ HM 
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 54.8 bits (133), Expect = 5e-10
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 257 LTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKH 314
            +    +H G K   C  C K FS  S L +H +VH G   YKC  C K F +   L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 315 MKVHQGMK 322
            ++H    
Sbjct: 62  QRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 54.4 bits (132), Expect = 6e-10
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 419 LTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKH 476
            +    +H G K   C  C K FS  S L +H +VH G   YKC  C K F +   L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 477 MKLHQGIK 484
            ++H    
Sbjct: 62  QRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 52.5 bits (127), Expect = 3e-09
 Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 122 LTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEH 179
            +    +H G + Y C  C K FS    L +H +VH G K  KC+ C K FS  S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 180 MKRHQGIK 187
            + H    
Sbjct: 62  QRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 52.1 bits (126), Expect = 4e-09
 Identities = 23/68 (33%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 176 LTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEH 233
            +     H G K Y C  C K FS  S L +H ++H  E  YKC  C K +S    L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 234 LKLHQGIK 241
            ++H    
Sbjct: 62  QRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 51.3 bits (124), Expect = 9e-09
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 230 LTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEH 287
            +    +H G K   CV C K FSR   L +H ++H G K  KC  C K FS  S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 288 MQVHQG 293
            ++H  
Sbjct: 62  QRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 51.3 bits (124), Expect = 9e-09
 Identities = 25/66 (37%), Positives = 32/66 (48%), Gaps = 2/66 (3%)

Query: 392 LTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEH 449
            +    +H G K   CV C K FSR   L +H ++H G K  KC  C K FS  S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 450 MQVHQG 455
            ++H  
Sbjct: 62  QRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 49.4 bits (119), Expect = 4e-08
 Identities = 24/68 (35%), Positives = 30/68 (44%), Gaps = 2/68 (2%)

Query: 284 LKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEH 341
                 +H G   Y C  C K F R   L +H +VH G K  KC+ C K FS  S L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 342 MKLHQGIK 349
            ++H    
Sbjct: 62  QRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 48.6 bits (117), Expect = 8e-08
 Identities = 19/55 (34%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
           Y C  C K +S    L +H ++H G + YKC  C K FS    L  H ++H    
Sbjct: 15  YGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 48.2 bits (116), Expect = 1e-07
 Identities = 22/68 (32%), Positives = 28/68 (41%), Gaps = 2/68 (2%)

Query: 446 LKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEH 503
                 +H G   Y C  C K F R   L +H ++H G K  KC  C K FS    L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 504 MKLHQGIK 511
            ++H    
Sbjct: 62  QRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 47.8 bits (115), Expect = 2e-07
 Identities = 22/65 (33%), Positives = 31/65 (47%), Gaps = 2/65 (3%)

Query: 528 TEHMKLHLGIKN-KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHM 585
           +    +H G K   C  C K FS    L +H ++H G + YKC  C K FS+   L  H 
Sbjct: 3   SGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62

Query: 586 KLHLG 590
           ++H  
Sbjct: 63  RIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 47.1 bits (113), Expect = 3e-07
 Identities = 21/68 (30%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 473 LTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEH 530
            +    +H G K   C  C K FS    L +H ++H G K  KC  C K FS    +  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 531 MKLHLGIK 538
            ++H    
Sbjct: 62  QRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 21/66 (31%), Positives = 29/66 (43%), Gaps = 2/66 (3%)

Query: 500 LTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTEH 557
            +    +H G K   C  C K FS    + +H ++H G K  KC  C K FS    L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 558 MKLHQG 563
            ++H  
Sbjct: 62  QRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 42.8 bits (102), Expect = 1e-05
 Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 338 LTEHMKLHQGIKN-KCDLCSKEFSCKRYVTEHMKLH-QEITYKCDLCLKEYSNKIYLTEH 395
            +    +H G K   C  C K FS    + +H ++H  E  YKC  C K +S    L  H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 396 LKLHQGIK 403
            ++H    
Sbjct: 62  QRIHTSGP 69

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 41.7 bits (99), Expect = 2e-05
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 366 TEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHM 423
           +    +H  E  Y C  C K +S    L +H ++H G K  KC+ C K FS+   L  H 
Sbjct: 3   SGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQ 62

Query: 424 KLHLGIK 430
           ++H    
Sbjct: 63  RIHTSGP 69

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 53.8 bits (130), Expect = 2e-09
 Identities = 22/74 (29%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 274 CSKEFSCKSHLKEHMQVHQGIT-YKCD--LCSKEFYRKQNLTKHMKVHQGMKN-KCVLCS 329
           C K F   + LK H   H     Y+C    C K F     L +H KVH G    K   CS
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 330 KEFSSKSYLTEHMK 343
               + +   +H+ 
Sbjct: 69  FVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 53.4 bits (129), Expect = 2e-09
 Identities = 23/74 (31%), Positives = 29/74 (39%), Gaps = 4/74 (5%)

Query: 436 CSKEFSCKSHLKEHMQVHQGIT-YKCN--LCSKEFYRKQNLTKHMKLHQGIKK-KCDLCS 491
           C K F   + LK H   H     Y+C    C K F     L +H K+H G    K D CS
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 492 KEFSTKCSLTEHMK 505
               T     +H+ 
Sbjct: 69  FVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 134 YKCDL--CSKEFSCKRYLTEHMKVHQGMK-NKC--VLCSKEFSSKSYLTEHMKRHQGIK- 187
           Y C    C K F     L  H   H      +C    C K FS  S L  H K H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 188 YKCNLCSKEFSSKSYLTEHMK 208
            K + CS    + +   +H+ 
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.5 bits (124), Expect = 1e-08
 Identities = 23/82 (28%), Positives = 30/82 (36%), Gaps = 6/82 (7%)

Query: 107 YKCDL--CSKEYSYKHTLTEHMKLHQGIR-YKCD--LCSKEFSCKRYLTEHMKVHQGMKN 161
           Y C    C K +   + L  H   H     Y+C    C K FS    L  H KVH G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 162 -KCVLCSKEFSSKSYLTEHMKR 182
            K   CS    + +   +H+  
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVAE 83

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 46.1 bits (110), Expect = 8e-07
 Identities = 24/81 (29%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 296 YKCDL--CSKEFYRKQNLTKHMKVHQGMK-NKC--VLCSKEFSSKSYLTEHMKLHQGIKN 350
           Y C    C K F +   L  H   H      +C    C K FS  S L  H K+H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 351 -KCDLCSKEFSCKRYVTEHMK 370
            K D CS          +H+ 
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 45.7 bits (109), Expect = 1e-06
 Identities = 23/81 (28%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 458 YKCNL--CSKEFYRKQNLTKHMKLHQGIKK-KCD--LCSKEFSTKCSLTEHMKLHQGIKK 512
           Y C+   C K F +   L  H   H      +C    C K FS    L  H K+H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 513 -KCDLCSKEFSCKRSVTEHMK 532
            K D CS          +H+ 
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 215 YKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKC--VLCSKEFSRKRRLTEHMKLHLGIKN 269
           Y C    C K +     L  H   H      +C    C K FS   RL  H K+H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 270 -KCNLCSKEFSCKSHLKEHMQ 289
            K + CS      +   +H+ 
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 22/81 (27%), Positives = 29/81 (35%), Gaps = 6/81 (7%)

Query: 377 YKCDL--CLKEYSNKIYLTEHLKLHQGIK-NKC--VLCSKEFSRKRRLTEHMKLHLGIKN 431
           Y C    C K +     L  H   H      +C    C K FS   RL  H K+H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPC 61

Query: 432 -KCNLCSKEFSCKSHLKEHMQ 451
            K + CS      +   +H+ 
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 42.6 bits (101), Expect = 1e-05
 Identities = 19/74 (25%), Positives = 25/74 (33%), Gaps = 4/74 (5%)

Query: 517 CSKEFSCKRSVTEHMKLHLGIK-NKCD--LCSKEFSTKHTLTEHMKLHQGIR-YKCDLCT 572
           C K F     +  H   H      +C    C K FS    L  H K+H G    K D C+
Sbjct: 9   CGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCS 68

Query: 573 KEFSRKGRLTEHMK 586
                     +H+ 
Sbjct: 69  FVGKTWTLYLKHVA 82

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.8 bits (128), Expect = 3e-09
 Identities = 23/68 (33%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 257 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKH 314
                      +  KC+ C K FS  S L +H + H G   YKCD C K F ++ +L  H
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 315 MKVHQGMK 322
            +VH G  
Sbjct: 66  HRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.4 bits (127), Expect = 4e-09
 Identities = 21/68 (30%), Positives = 31/68 (45%), Gaps = 2/68 (2%)

Query: 419 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKH 476
                      +  KC+ C K FS  S L +H + H G   YKC+ C K F ++ +L  H
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 477 MKLHQGIK 484
            ++H G  
Sbjct: 66  HRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.1 bits (126), Expect = 5e-09
 Identities = 23/71 (32%), Positives = 31/71 (43%), Gaps = 2/71 (2%)

Query: 281 KSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYL 338
                      +    YKCD C K F    +L+KH + H G K  KC  C K F  +S+L
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 339 TEHMKLHQGIK 349
             H ++H G  
Sbjct: 63  IGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 52.1 bits (126), Expect = 5e-09
 Identities = 23/72 (31%), Positives = 35/72 (48%), Gaps = 2/72 (2%)

Query: 172 SKSYLTEHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIY 229
           S         + +  + YKC+ C K FS  S L++H + H  E  YKCD C K +  + +
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 230 LTEHLKLHQGIK 241
           L  H ++H G  
Sbjct: 62  LIGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 51.7 bits (125), Expect = 7e-09
 Identities = 24/72 (33%), Positives = 32/72 (44%), Gaps = 3/72 (4%)

Query: 121 TLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTE 178
           +        +  R YKCD C K FS    L++H + H G K  KC  C K F  +S+L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 179 HMKRHQGIK-YK 189
           H + H G     
Sbjct: 65  HHRVHTGSGPSS 76

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.5 bits (122), Expect = 2e-08
 Identities = 22/71 (30%), Positives = 30/71 (42%), Gaps = 2/71 (2%)

Query: 443 KSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSL 500
                      +    YKC+ C K F    +L+KH + H G K  KCD C K F  +  L
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 501 TEHMKLHQGIK 511
             H ++H G  
Sbjct: 63  IGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.0 bits (118), Expect = 6e-08
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 230 LTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEH 287
                   +  +  KC  C K FS    L++H + H G K  KC+ C K F  +SHL  H
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 288 MQVHQG 293
            +VH G
Sbjct: 66  HRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.0 bits (118), Expect = 6e-08
 Identities = 23/66 (34%), Positives = 31/66 (46%), Gaps = 2/66 (3%)

Query: 392 LTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEH 449
                   +  +  KC  C K FS    L++H + H G K  KC+ C K F  +SHL  H
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 450 MQVHQG 455
            +VH G
Sbjct: 66  HRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.9 bits (110), Expect = 7e-07
 Identities = 23/67 (34%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 526 SVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTE 583
           S           +  KCD C K FS    L++H + H G + YKCD C K F ++  L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 584 HMKLHLG 590
           H ++H G
Sbjct: 65  HHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.9 bits (110), Expect = 8e-07
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 2/69 (2%)

Query: 472 NLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTE 529
           +  +     +  ++ KCD C K FS    L++H + H G K  KCD C K F  +  +  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 530 HMKLHLGIK 538
           H ++H G  
Sbjct: 65  HHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.5 bits (109), Expect = 1e-06
 Identities = 23/55 (41%), Positives = 32/55 (58%), Gaps = 1/55 (1%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
           YKCD C K +S+   L++H + H G + YKCD C K F  + +L  H +VH G  
Sbjct: 19  YKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.0 bits (105), Expect = 4e-06
 Identities = 22/67 (32%), Positives = 32/67 (47%), Gaps = 2/67 (2%)

Query: 499 SLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKN-KCDLCSKEFSTKHTLTE 556
           S        +  ++ KCD C K FS    +++H + H G K  KCD C K F  +  L  
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 557 HMKLHQG 563
           H ++H G
Sbjct: 65  HHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 43.2 bits (103), Expect = 7e-06
 Identities = 21/72 (29%), Positives = 32/72 (44%), Gaps = 2/72 (2%)

Query: 334 SKSYLTEHMKLHQGIK-NKCDLCSKEFSCKRYVTEHMKLH-QEITYKCDLCLKEYSNKIY 391
           S           +  +  KCD C K FS    +++H + H  E  YKCD C K +  + +
Sbjct: 2   SSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSH 61

Query: 392 LTEHLKLHQGIK 403
           L  H ++H G  
Sbjct: 62  LIGHHRVHTGSG 73

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.4 bits (88), Expect = 8e-04
 Identities = 21/67 (31%), Positives = 31/67 (46%), Gaps = 2/67 (2%)

Query: 366 TEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIKN-KCVLCSKEFSRKRRLTEHM 423
                  +    YKCD C K +S+   L++H + H G K  KC  C K F ++  L  H 
Sbjct: 7   GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHH 66

Query: 424 KLHLGIK 430
           ++H G  
Sbjct: 67  RVHTGSG 73

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 49.9 bits (120), Expect = 4e-08
 Identities = 24/71 (33%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 134 YKCDL--CSKEFSCKRYLTEHMKV-HQGMK-NKC--VLCSKEFSSKSYLTEHMKRHQGIK 187
             CD   C + FS ++YL  H K  H   K   C    C K F+ K +L EHMK H   +
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 188 -YKCNLCSKEF 197
            Y C       
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 23/60 (38%), Positives = 31/60 (51%), Gaps = 5/60 (8%)

Query: 166 CSKEFSSKSYLTEHMK-RHQGIK-YKCN--LCSKEFSSKSYLTEHMKLHQ-EITYKCDLC 220
           C + FS++ YL  H K +H   K + C    C K F+ K +L EHMKLH     Y C+  
Sbjct: 15  CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 47.2 bits (113), Expect = 3e-07
 Identities = 22/64 (34%), Positives = 29/64 (45%), Gaps = 5/64 (7%)

Query: 409 CSKEFSRKRRLTEHMKL-HLGIK-NKCN--LCSKEFSCKSHLKEHMQVHQGIT-YKCNLC 463
           C + FS ++ L  H K  H+  K   C    C K F+ K HLKEHM++H     Y C   
Sbjct: 15  CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

Query: 464 SKEF 467
               
Sbjct: 75  GPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 23/71 (32%), Positives = 30/71 (42%), Gaps = 7/71 (9%)

Query: 296 YKCDL--CSKEFYRKQNLTKHMKV-HQGMK-NKC--VLCSKEFSSKSYLTEHMKLHQGIK 349
             CD   C + F  +Q L  H K  H   K   C    C K F+ K +L EHMKLH   +
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 350 N-KCDLCSKEF 359
           +  C+      
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 47.2 bits (113), Expect = 4e-07
 Identities = 22/64 (34%), Positives = 30/64 (46%), Gaps = 5/64 (7%)

Query: 247 CSKEFSRKRRLTEHMKL-HLGIK-NKCN--LCSKEFSCKSHLKEHMQVHQGIT-YKCDLC 301
           C + FS ++ L  H K  H+  K   C    C K F+ K HLKEHM++H     Y C+  
Sbjct: 15  CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

Query: 302 SKEF 305
               
Sbjct: 75  GPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 46.8 bits (112), Expect = 4e-07
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 432 KCNL--CSKEFSCKSHLKEHMQV-HQGI-TYKCN--LCSKEFYRKQNLTKHMKLHQGIKK 485
            C+   C + FS + +L  H +  H    ++ C    C K F  K++L +HMKLH   + 
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68

Query: 486 -KCDLCSKEF 494
             C+      
Sbjct: 69  YICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 45.6 bits (109), Expect = 1e-06
 Identities = 22/71 (30%), Positives = 28/71 (39%), Gaps = 7/71 (9%)

Query: 458 YKCNL--CSKEFYRKQNLTKHMKL-HQGIKK-KCD--LCSKEFSTKCSLTEHMKLHQGIK 511
             C+   C + F  +Q L  H K  H   K   C    C K F+ K  L EHMKLH   +
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 512 K-KCDLCSKEF 521
              C+      
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 43.3 bits (103), Expect = 7e-06
 Identities = 20/71 (28%), Positives = 31/71 (43%), Gaps = 7/71 (9%)

Query: 107 YKCDL--CSKEYSYKHTLTEHMKL-HQGIR-YKCD--LCSKEFSCKRYLTEHMKVHQGMK 160
             CD   C + +S +  L  H K  H   + + C    C K F+ K++L EHMK+H   +
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 161 N-KCVLCSKEF 170
           +  C       
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.6 bits (96), Expect = 6e-05
 Identities = 24/70 (34%), Positives = 31/70 (44%), Gaps = 7/70 (10%)

Query: 513 KCDL--CSKEFSCKRSVTEHMKL-HLGIK-NKCD--LCSKEFSTKHTLTEHMKLHQGIR- 565
            CD   C + FS ++ +  H K  H+  K   C    C K F+ K  L EHMKLH   R 
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68

Query: 566 YKCDLCTKEF 575
           Y C+      
Sbjct: 69  YICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 21/57 (36%), Positives = 26/57 (45%), Gaps = 6/57 (10%)

Query: 540 KCDL--CSKEFSTKHTLTEHMKL-HQGIR-YKCD--LCTKEFSRKGRLTEHMKLHLG 590
            CD   C + FS +  L  H K  H   + + C    C K F+ K  L EHMKLH  
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSD 65

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 22/70 (31%), Positives = 30/70 (42%), Gaps = 7/70 (10%)

Query: 486 KCDL--CSKEFSTKCSLTEHMKL-HQGIKK-KCD--LCSKEFSCKRSVTEHMKLHLGIKN 539
            CD   C + FS +  L  H K  H   K   C    C K F+ K+ + EHMKLH   ++
Sbjct: 9   PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRD 68

Query: 540 -KCDLCSKEF 548
             C+      
Sbjct: 69  YICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 38.7 bits (91), Expect = 3e-04
 Identities = 19/71 (26%), Positives = 32/71 (45%), Gaps = 7/71 (9%)

Query: 188 YKCNL--CSKEFSSKSYLTEHMKLHQ--EITYKCD--LCLKEYSNKIYLTEHLKLHQGIK 241
             C+   C + FS++ YL  H K     + ++ C    C K ++ K +L EH+KLH   +
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 242 N-KCVLCSKEF 251
           +  C       
Sbjct: 68  DYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 38.3 bits (90), Expect = 4e-04
 Identities = 22/60 (36%), Positives = 30/60 (50%), Gaps = 5/60 (8%)

Query: 328 CSKEFSSKSYLTEHMKL-HQGIK-NKCD--LCSKEFSCKRYVTEHMKLHQ-EITYKCDLC 382
           C + FS++ YL  H K  H   K   C    C K F+ K+++ EHMKLH     Y C+  
Sbjct: 15  CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 48.7 bits (115), Expect = 2e-07
 Identities = 20/92 (21%), Positives = 36/92 (39%), Gaps = 2/92 (2%)

Query: 122 LTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMK 181
            +    +     Y+C LC+ + S       H ++ +     C  CS  F S     EH  
Sbjct: 5   SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHES 63

Query: 182 RHQGIKYKCNLCSKEFSSKSYLTEH-MKLHQE 212
           + +  K  C  C + F S   +  H +++H +
Sbjct: 64  KCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQ 95

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 44.1 bits (103), Expect = 8e-06
 Identities = 19/85 (22%), Positives = 29/85 (34%), Gaps = 1/85 (1%)

Query: 98  KKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQ 157
              +     Y+C LC+ + S       H +L +     C  CS  F       EH    +
Sbjct: 8   ASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHESKCE 66

Query: 158 GMKNKCVLCSKEFSSKSYLTEHMKR 182
             K  C+ C + F S   +  H   
Sbjct: 67  YKKLTCLECMRTFKSSFSIWRHQVE 91

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.4 bits (101), Expect = 1e-05
 Identities = 20/94 (21%), Positives = 33/94 (35%), Gaps = 2/94 (2%)

Query: 282 SHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEH 341
           S       V     Y+C LC+ +         H ++ +     C  CS  F S     EH
Sbjct: 3   SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEH 61

Query: 342 MKLHQGIKNKCDLCSKEFSCKRYVTEH-MKLHQE 374
               +  K  C  C + F     +  H +++H +
Sbjct: 62  ESKCEYKKLTCLECMRTFKSSFSIWRHQVEVHNQ 95

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.0 bits (100), Expect = 2e-05
 Identities = 20/89 (22%), Positives = 29/89 (32%), Gaps = 1/89 (1%)

Query: 444 SHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEH 503
           S       V     Y+C LC+ +         H +L +     C  CS  F +     EH
Sbjct: 3   SGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEH 61

Query: 504 MKLHQGIKKKCDLCSKEFSCKRSVTEHMK 532
               +  K  C  C + F    S+  H  
Sbjct: 62  ESKCEYKKLTCLECMRTFKSSFSIWRHQV 90

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 43.0 bits (100), Expect = 2e-05
 Identities = 16/74 (21%), Positives = 26/74 (35%), Gaps = 1/74 (1%)

Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCS 464
           +C LC+ + S       H +L       C  CS  F      +EH    +     C  C 
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76

Query: 465 KEFYRKQNLTKHMK 478
           + F    ++ +H  
Sbjct: 77  RTFKSSFSIWRHQV 90

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 42.6 bits (99), Expect = 3e-05
 Identities = 17/75 (22%), Positives = 28/75 (37%), Gaps = 1/75 (1%)

Query: 188 YKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLKLHQGIKNKCVLC 247
           Y+C LC+ + SS      H +L +     C  C   + +     EH    +  K  C+ C
Sbjct: 17  YQCRLCNAKLSSLLEQGSHERLCRNAA-VCPYCSLRFFSPELKQEHESKCEYKKLTCLEC 75

Query: 248 SKEFSRKRRLTEHMK 262
            + F     +  H  
Sbjct: 76  MRTFKSSFSIWRHQV 90

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 42.6 bits (99), Expect = 3e-05
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 1/74 (1%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCS 329
           +C LC+ + S       H ++ +     C  CS  F+  +   +H    +  K  C+ C 
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLCRNAA-VCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76

Query: 330 KEFSSKSYLTEHMK 343
           + F S   +  H  
Sbjct: 77  RTFKSSFSIWRHQV 90

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 42.2 bits (98), Expect = 3e-05
 Identities = 18/78 (23%), Positives = 30/78 (38%), Gaps = 2/78 (2%)

Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCS 302
           +C LC+ + S       H +L       C  CS  F      +EH    +     C  C 
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76

Query: 303 KEFYRKQNLTKH-MKVHQ 319
           + F    ++ +H ++VH 
Sbjct: 77  RTFKSSFSIWRHQVEVHN 94

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.8 bits (97), Expect = 5e-05
 Identities = 16/74 (21%), Positives = 29/74 (39%), Gaps = 1/74 (1%)

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCS 491
           +C LC+ + S       H ++ +     C  CS  F+  +   +H    +  K  C  C 
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLCRNAA-VCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76

Query: 492 KEFSTKCSLTEHMK 505
           + F +  S+  H  
Sbjct: 77  RTFKSSFSIWRHQV 90

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.0 bits (95), Expect = 8e-05
 Identities = 17/85 (20%), Positives = 29/85 (34%), Gaps = 1/85 (1%)

Query: 149 LTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMK 208
            +    V      +C LC+ + SS      H +  +     C  CS  F S     EH  
Sbjct: 5   SSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHES 63

Query: 209 LHQEITYKCDLCLKEYSNKIYLTEH 233
             +     C  C++ + +   +  H
Sbjct: 64  KCEYKKLTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.9 bits (92), Expect = 2e-04
 Identities = 17/86 (19%), Positives = 29/86 (33%), Gaps = 1/86 (1%)

Query: 310 NLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHM 369
             +    V      +C LC+ + SS      H +L +     C  CS  F       EH 
Sbjct: 4   GSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRN-AAVCPYCSLRFFSPELKQEHE 62

Query: 370 KLHQEITYKCDLCLKEYSNKIYLTEH 395
              +     C  C++ + +   +  H
Sbjct: 63  SKCEYKKLTCLECMRTFKSSFSIWRH 88

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 39.1 bits (90), Expect = 4e-04
 Identities = 16/74 (21%), Positives = 25/74 (33%), Gaps = 1/74 (1%)

Query: 513 KCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCT 572
           +C LC+ + S       H +L       C  CS  F +     EH    +  +  C  C 
Sbjct: 18  QCRLCNAKLSSLLEQGSHERLC-RNAAVCPYCSLRFFSPELKQEHESKCEYKKLTCLECM 76

Query: 573 KEFSRKGRLTEHMK 586
           + F     +  H  
Sbjct: 77  RTFKSSFSIWRHQV 90

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHM-KLHQG 482
            C +C++ F+ + HLK H + H     Y C LC++ F R+  L +H  K+H G
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 45.9 bits (110), Expect = 4e-07
 Identities = 19/53 (35%), Positives = 30/53 (56%), Gaps = 2/53 (3%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHM-KVHQG 320
            C +C++ F+ + HLK H + H     Y C LC++ F R+  L +H  K+H G
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 243 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQ-VHQG 293
            C +C++ F+R+  L  H + H   K   C LC++ F+ +  L  H Q +H G
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 44.4 bits (106), Expect = 2e-06
 Identities = 17/53 (32%), Positives = 28/53 (52%), Gaps = 2/53 (3%)

Query: 405 KCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQ-VHQG 455
            C +C++ F+R+  L  H + H   K   C LC++ F+ +  L  H Q +H G
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 44.0 bits (105), Expect = 3e-06
 Identities = 17/54 (31%), Positives = 32/54 (59%), Gaps = 2/54 (3%)

Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMK-NKCVLCSKEFSSKSYLTEHM-KLHQG 347
           + C++C++ F R+++L +H + H   K   C LC++ F+ +  L  H  K+H G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 43.6 bits (104), Expect = 3e-06
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQGMK-NKCVLCSKEFSSKSYLTEHMKR-HQG 185
           + C++C++ F+ + +L  H + H   K   C LC++ F+ +  L  H ++ H G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 17/54 (31%), Positives = 31/54 (57%), Gaps = 2/54 (3%)

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHM-KLHQG 509
           + C +C++ F R+++L +H + H   K   C LC++ F+ +  L  H  K+H G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 15/54 (27%), Positives = 30/54 (55%), Gaps = 2/54 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHM-KVHQG 158
           + C++C++ ++ +  L  H + H   + Y C LC++ F+ +  L  H  K+H G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 40.9 bits (97), Expect = 3e-05
 Identities = 17/53 (32%), Positives = 29/53 (54%), Gaps = 2/53 (3%)

Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHM-KLHLG 590
            C++C++ F+ +  L  H + H   + Y C LC + F+R+  L  H  K+H G
Sbjct: 4   VCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.8 bits (94), Expect = 8e-05
 Identities = 16/54 (29%), Positives = 29/54 (53%), Gaps = 2/54 (3%)

Query: 188 YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCDLCLKEYSNKIYLTEHL-KLHQG 239
           + C +C++ F+ + +L  H + H  E  Y C LC + ++ +  L  H  K+H G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.2 bits (103), Expect = 1e-05
 Identities = 29/120 (24%), Positives = 44/120 (36%), Gaps = 2/120 (1%)

Query: 90  ESYKRGKLKKKLCQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKEFSC-KRY 148
           ES      KK L    G    +  +E    H LT   K       K  + + +      Y
Sbjct: 3   ESDVDSGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSY 62

Query: 149 LTEHMKVHQGMKNKCVLCSKEFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMK 208
           L   +      +  C LC   FSS   L +H++  +     C +C KEF+S     +H+ 
Sbjct: 63  LYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVC 121

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 43.0 bits (100), Expect = 3e-05
 Identities = 26/113 (23%), Positives = 49/113 (43%), Gaps = 4/113 (3%)

Query: 232 EHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKS-HLKEHMQV 290
           ++L  H+GI     +  +E  R  +LT   K  +    K  + + +   +S +L   +  
Sbjct: 12  KYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69

Query: 291 HQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFSSKSYLTEHMK 343
                + C LC   F    +L +H++  +  K  C +C KEF+S     +H+ 
Sbjct: 70  KAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDHVC 121

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 42.6 bits (99), Expect = 4e-05
 Identities = 26/113 (23%), Positives = 50/113 (44%), Gaps = 4/113 (3%)

Query: 394 EHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKS-HLKEHMQV 452
           ++L  H+GI     +  +E  R  +LT   K  +    K  + + +   +S +L   +  
Sbjct: 12  KYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69

Query: 453 HQGITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMK 505
                + C LC   F    +L +H++  +   K C +C KEF++  S  +H+ 
Sbjct: 70  KAISQFVCPLCLMPFSSSVSLKQHIRYTEH-TKVCPVCKKEFTSTDSALDHVC 121

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.5 bits (96), Expect = 9e-05
 Identities = 28/122 (22%), Positives = 50/122 (40%), Gaps = 4/122 (3%)

Query: 277 EFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHMKVHQGMKNKCVLCSKEFS-SK 335
           E    S  K+++  H+GI     +  +E  R   LT   K       K ++ + +     
Sbjct: 3   ESDVDSGSKKYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDES 60

Query: 336 SYLTEHMKLHQGIKNKCDLCSKEFSCKRYVTEHMKLHQEITYKCDLCLKEYSNKIYLTEH 395
           SYL   +      +  C LC   FS    + +H++   E T  C +C KE+++     +H
Sbjct: 61  SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDH 119

Query: 396 LK 397
           + 
Sbjct: 120 VC 121

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 41.5 bits (96), Expect = 9e-05
 Identities = 26/113 (23%), Positives = 48/113 (42%), Gaps = 4/113 (3%)

Query: 124 EHMKLHQGIRYKCDLCSKEFSCKRYLTEHMKVHQGMKNKCVLCSKEFS-SKSYLTEHMKR 182
           +++  H+GI     +  +E      LT   K       K ++ + +     SYL   +  
Sbjct: 12  KYLSNHKGI--FIHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLAS 69

Query: 183 HQGIKYKCNLCSKEFSSKSYLTEHMKLHQEITYKCDLCLKEYSNKIYLTEHLK 235
               ++ C LC   FSS   L +H++   E T  C +C KE+++     +H+ 
Sbjct: 70  KAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVC 121

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.8 bits (89), Expect = 8e-04
 Identities = 29/128 (22%), Positives = 46/128 (35%), Gaps = 4/128 (3%)

Query: 169 EFSSKSYLTEHMKRHQGIKYKCNLCSKEFSSKSYLTEHMK-LHQEITYKCDLCLKEYSNK 227
           E    S   +++  H+GI    ++  +E      LT   K L + I        +     
Sbjct: 3   ESDVDSGSKKYLSNHKGIF--IHVTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDES 60

Query: 228 IYLTEHLKLHQGIKNKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEH 287
            YL   L      +  C LC   FS    L +H++     K  C +C KEF+      +H
Sbjct: 61  SYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTEHTK-VCPVCKKEFTSTDSALDH 119

Query: 288 MQVHQGIT 295
           +     I 
Sbjct: 120 VCKKHNIC 127

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.0 bits (97), Expect = 3e-05
 Identities = 13/40 (32%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 162 KCVLCSKEFSSKSYLTEHMKR-HQGIK-YKCNLCSKEFSS 199
            C  C K FS   +L  H+K+ H   + +KC +     SS
Sbjct: 14  ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)

Query: 432 KCNLCSKEFSCKSHLKEHMQ-VHQG-ITYKCNLCSKEF 467
            C  C K FS   HL  H++ VH     +KC +     
Sbjct: 14  ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 37.9 bits (89), Expect = 3e-04
 Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)

Query: 270 KCNLCSKEFSCKSHLKEHMQ-VHQG-ITYKCDLCSKEF 305
            C  C K FS   HL  H++ VH     +KC +     
Sbjct: 14  ICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 15/51 (29%), Positives = 22/51 (43%), Gaps = 3/51 (5%)

Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMK-LHQ-EITYKCDLCLKEYSN 226
                   K Y C  C K FS   +L  H+K +H  E  +KC + +   S+
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 3e-05
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQGIKK-KCDLCSKEFSTKCSLTEHMKLHQGIKK 512
           Y C  C     +   L KH++ H  ++   C  C+  F TK +LT+HMK     KK
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.9 bits (95), Expect = 4e-05
 Identities = 18/55 (32%), Positives = 25/55 (45%), Gaps = 1/55 (1%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQGIR-YKCDLCSKEFSCKRYLTEHMKVHQGMK 160
           Y C+ C         L +H++ H  +R Y C  C+  F  K  LT+HMK     K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.1 bits (93), Expect = 5e-05
 Identities = 20/54 (37%), Positives = 25/54 (46%), Gaps = 1/54 (1%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCDLCSKEFYRKQNLTKHMKVHQGMK 322
            C  C       S LK+H++ H  +  Y C  C+  F  K NLTKHMK     K
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 39.7 bits (92), Expect = 7e-05
 Identities = 21/55 (38%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQGIT-YKCNLCSKEFYRKQNLTKHMKLHQGIKK 485
            C  C       S LK+H++ H  +  Y C  C+  F  K NLTKHMK     KK
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSKK 57

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.9 bits (90), Expect = 2e-04
 Identities = 16/56 (28%), Positives = 26/56 (46%), Gaps = 1/56 (1%)

Query: 133 RYKCDLCSKEFSCKRYLTEHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKRHQGIK 187
           +Y C+ C         L +H++ H  ++   C  C+  F +K  LT+HMK     K
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.2 bits (88), Expect = 3e-04
 Identities = 17/55 (30%), Positives = 26/55 (47%), Gaps = 1/55 (1%)

Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQGMKN-KCVLCSKEFSSKSYLTEHMKLHQGIK 349
           Y C+ C     +   L KH++ H  ++   C  C+  F +K  LT+HMK     K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.4 bits (86), Expect = 6e-04
 Identities = 17/52 (32%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 540 KCDLCSKEFSTKHTLTEHMKLHQGIR-YKCDLCTKEFSRKGRLTEHMKLHLG 590
            C+ C         L +H++ H  +R Y C  C   F  KG LT+HMK    
Sbjct: 3   ICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 37.0 bits (85), Expect = 8e-04
 Identities = 17/56 (30%), Positives = 23/56 (41%), Gaps = 1/56 (1%)

Query: 187 KYKCNLCSKEFSSKSYLTEHMKLHQ-EITYKCDLCLKEYSNKIYLTEHLKLHQGIK 241
           KY C  C       S L +H++ H     Y C  C   +  K  LT+H+K     K
Sbjct: 1   KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.8 bits (95), Expect = 6e-05
 Identities = 18/67 (26%), Positives = 28/67 (41%), Gaps = 7/67 (10%)

Query: 257 LTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGITYKCDLCSKEFYRKQNLTKHM 315
             +  K+HLG ++ KC+ C   F  +S L          T  C+ C K+  ++  L K  
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAALNKDE 59

Query: 316 KVHQGMK 322
               G K
Sbjct: 60  GNESGKK 66

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.3 bits (91), Expect = 2e-04
 Identities = 18/67 (26%), Positives = 27/67 (40%), Gaps = 7/67 (10%)

Query: 419 LTEHMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHM 477
             +  K+HLG ++ KC+ C   F  +S L          T  C  C K+  ++  L K  
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRK------TPMCEKCRKDSCQEAALNKDE 59

Query: 478 KLHQGIK 484
               G K
Sbjct: 60  GNESGKK 66

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 44.8 bits (105), Expect = 9e-05
 Identities = 11/51 (21%), Positives = 15/51 (29%), Gaps = 1/51 (1%)

Query: 161 NKCVLCSKEFSSKSYLTEHMKRH-QGIKYKCNLCSKEFSSKSYLTEHMKLH 210
                 S   S              G  Y+C++CS    S   L  H+  H
Sbjct: 153 RIAEATSAIVSKHPARVGLPPTASSGHGYQCHVCSAVLFSPLDLDAHVASH 203

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 2e-04
 Identities = 13/43 (30%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 178 EHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKCD 218
                  G K Y CN+C K F   ++L +H+++H QE      
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.6 bits (88), Expect = 3e-04
 Identities = 12/34 (35%), Positives = 15/34 (44%), Gaps = 1/34 (2%)

Query: 178 EHMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
                    K Y CN C K F+   +LT H K+H
Sbjct: 2   SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIH 35

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.8 bits (90), Expect = 4e-04
 Identities = 16/68 (23%), Positives = 22/68 (32%), Gaps = 11/68 (16%)

Query: 134 YKCDLCSKEFSCKRYLTEHM-KVHQGMKNK---------CVLCSKEFSSKSYLTEHMKRH 183
                C + FS    L  H+   H G   +         C    K F +K  L  H++ H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 184 QGIK-YKC 190
            G K    
Sbjct: 86  TGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.4 bits (89), Expect = 6e-04
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 10/61 (16%)

Query: 243 KCVLCSKEFSRKRRLTEHM-KLHLGIKNK---------CNLCSKEFSCKSHLKEHMQVHQ 292
               C + FS    L  H+   H+G   +         C    K F  K  L  H++VH 
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86

Query: 293 G 293
           G
Sbjct: 87  G 87

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.4 bits (89), Expect = 6e-04
 Identities = 16/61 (26%), Positives = 22/61 (36%), Gaps = 10/61 (16%)

Query: 405 KCVLCSKEFSRKRRLTEHM-KLHLGIKNK---------CNLCSKEFSCKSHLKEHMQVHQ 454
               C + FS    L  H+   H+G   +         C    K F  K  L  H++VH 
Sbjct: 27  PKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHT 86

Query: 455 G 455
           G
Sbjct: 87  G 87

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 38.1 bits (89), Expect = 4e-04
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 3/48 (6%)

Query: 274 CSKEFSCKSHLKEHMQVHQGIT-YKCDL--CSKEFYRKQNLTKHMKVH 318
           C K +   SHLK H + H G   + C    C + F R   L++H + H
Sbjct: 25  CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.8 bits (88), Expect = 6e-04
 Identities = 16/48 (33%), Positives = 24/48 (50%), Gaps = 3/48 (6%)

Query: 436 CSKEFSCKSHLKEHMQVHQGIT-YKCNL--CSKEFYRKQNLTKHMKLH 480
           C K +   SHLK H + H G   + C+   C + F R   L++H + H
Sbjct: 25  CGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 4e-04
 Identities = 17/41 (41%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
                 G K Y C+ C K FSSKSYL  HM+ H  E     
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 5e-04
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
                 G K +KCN C K F+  S LT H ++H  E     
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 260 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 293
                 G K  KC  C   F   +HL+ H+ +H G
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 11/35 (31%), Positives = 15/35 (42%), Gaps = 1/35 (2%)

Query: 422 HMKLHLGIKN-KCNLCSKEFSCKSHLKEHMQVHQG 455
                 G K  KC  C   F   +HL+ H+ +H G
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTG 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.3 bits (85), Expect = 7e-04
 Identities = 10/33 (30%), Positives = 14/33 (42%), Gaps = 1/33 (3%)

Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
                 G K YKC  C   F   ++L  H+ +H
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIH 34

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 16/41 (39%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
                 G K YKCN C K FS  S L++H K+H  E     
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 7e-04
 Identities = 14/41 (34%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLH-QEITYKC 217
                 G + Y CN C K F   S+L EH+K H +E +   
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 8e-04
 Identities = 15/41 (36%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 179 HMKRHQGIK-YKCNLCSKEFSSKSYLTEHMKLHQ-EITYKC 217
                 G K Y CN C K FS KS L+ H + H  E     
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	591
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.84
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.83
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.83
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.83
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.83
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.82
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.82
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.81
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.81
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.81
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.68
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.67
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.66
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.66
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.65
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.65
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.64
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.64
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.63
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.63
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.62
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.61
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.6
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.59
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.58
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.58
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.56
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.56
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.56
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.54
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.52
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.52
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.51
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.5
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.49
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.49
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.42
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.42
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.41
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.4
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.37
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.37
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.36
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.36
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.34
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.34
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.33
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.32
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.32
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.3
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.29
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.29
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.28
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.27
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.25
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.25
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.24
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.24
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.23
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.23
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.22
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.2
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.19
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.18
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.18
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.17
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.16
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.12
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.11
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.01
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.0
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	98.99
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.93
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	98.89
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.87
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.84
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.84
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.84
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.83
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.82
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.82
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.82
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.82
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.82
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.81
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.81
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.81
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.81
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.81
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.81
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.8
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.8
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.8
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.79
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.79
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.79
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.79
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.79
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.78
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.78
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.78
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.78
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.77
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.77
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.77
2epa_A	72	Krueppel-like factor 10; transforming growth facto	98.76
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.76
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.76
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.76
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.76
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.75
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.75
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.75
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.75
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.75
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.75
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.75
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.74
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.74
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.74
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.74
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	98.74
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.74
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.73
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.73
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.73
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.73
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.73
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.73
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	98.72
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.72
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.72
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.72
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.72
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.72
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.72
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.72
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	98.71
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	98.71
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.71
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	98.71
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.71
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.71
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.71
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.7
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	98.7
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.7
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.7
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.69
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	98.68
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.67
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.66
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.65
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.65
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.64
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.63
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.63
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	98.63
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.63
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.63
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.63
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.62
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.62
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.62
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.61
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.61
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.61
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.6
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.6
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.6
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.6
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.6
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.6
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.6
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.59
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.59
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.59
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.59
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.59
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.59
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.58
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.58
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.58
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.57
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.57
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	98.57
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.57
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	98.56
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.56
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.55
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	98.55
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.55
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.54
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.54
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.54
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.53
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.53
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	98.53
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.52
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.52
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.52
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.52
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.52
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.52
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.52
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.51
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.51
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.51
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.51
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.51
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	98.5
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.5
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.5
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	98.5
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	98.5
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.5
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.49
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.49
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	98.49
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	98.49
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.48
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.48
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.48
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.48
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.48
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.48
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	98.47
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	98.47
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	98.46
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.45
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	98.45
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	98.45
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.45
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	98.44
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.44
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.43
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.43
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	98.43
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.43
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	98.42
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.42
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.42
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.41
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	98.41
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.41
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.41
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.4
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.4
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.38
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.38
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.36
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.35
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.34
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.33
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.33
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.33
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.32
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.3
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.29
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.28
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.25
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.24
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.24
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.21
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.2
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.18
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.18
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.15
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.14
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.14
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.12
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.12
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.11
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.09
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.08
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.08
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.08
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.07
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.06
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.05
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.03
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.03
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.02
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.02
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.01
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.01
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.0
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.0
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.99
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.99
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.98
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	97.98
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.22
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.97
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.97
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.97
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	97.96
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.95
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.95
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.93
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.92
1ard_A	29	Yeast transcription factor ADR1; transcription reg	97.92
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.14
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.14
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	97.91
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	97.9
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.9
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	97.86
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	97.82
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	97.81
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	97.81
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	97.81
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	97.8
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	97.8
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.0
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.79
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	97.77
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	97.77
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	97.76
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.74
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.73
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	97.73
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	97.73
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	97.72
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	97.71
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	97.7
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.88
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	96.84
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	97.65
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	97.64
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.64
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.62
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	97.61
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	97.51
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.47
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.59
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	96.59
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	95.65
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.04
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	94.2
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.15
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.02
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	93.73
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.05
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	92.82
1v65_A	64	Riken cDNA 2610044O15; transcriptional repressor,	91.71
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	82.64
1v65_A	64	Riken cDNA 2610044O15; transcriptional repressor,	81.51
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	81.15
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	81.02

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3.7e-35  Score=266.94  Aligned_cols=176  Identities=39%  Similarity=0.701  Sum_probs=130.1

Q ss_pred             chhHHHHHHHhCCCC-CCccccccccCChhhHHHHHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccCcc
Q psy8499         416 KRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSK  492 (591)
Q Consensus       416 ~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~  492 (591)
                      ...|..|++.|.+.+ |.|++|++.|.+...|..|++.|.+ ++|.|+.|++.|.+...|..|+++|++.+ |.|++|++
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   85 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGK   85 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCC
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCC
Confidence            356777777777665 7888888888888888888888877 78889999999999899999988888765 68999999


Q ss_pred             ccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         493 EFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       493 ~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      .|.+...|..|+++|++.++ .|++|++.|.+...|..|+++|++++ ++|++|+++|.++..|..|+++|++. ||.|+
T Consensus        86 ~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~  165 (190)
T 2i13_A           86 SFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCP  165 (190)
T ss_dssp             EESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECT
T ss_pred             ccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECC
Confidence            99999999999988888777 89999999999999999999988876 68999999999999999999998875 89999


Q ss_pred             cCccccccchhHHhHhhhccCC
Q psy8499         570 LCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       570 ~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +||++|.+...|..|+++|+|+
T Consensus       166 ~C~~~f~~~~~L~~H~~~H~~~  187 (190)
T 2i13_A          166 ECGKSFSRRDALNVHQRTHTGK  187 (190)
T ss_dssp             TTCCEESSHHHHHHHHTTC---
T ss_pred             CCCCccCCHHHHHHHHHhcCCC
Confidence            9999999999999999999875

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=4.4e-34  Score=259.82  Aligned_cols=175  Identities=39%  Similarity=0.677  Sum_probs=111.3

Q ss_pred             HHHHHHHHHhCCCC-CccccchhccCCchhHHHHHHHhCCCC-CCccccccccCChhhHHHHHHhhCC-ccccccccccc
Q psy8499         390 IYLTEHLKLHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKE  466 (591)
Q Consensus       390 ~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~  466 (591)
                      ..|..|++.+.+.+ +.|+.|++.|.+...|..|++.|.+.+ +.|++|++.|.+...|..|+++|.+ ++|.|+.|++.
T Consensus         7 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   86 (190)
T 2i13_A            7 SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKS   86 (190)
T ss_dssp             ------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCE
T ss_pred             ccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCc
Confidence            34555666655544 566666666666666666666666544 5777777777777777777777765 67777777777


Q ss_pred             ccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHhhcCCC-CCCCc
Q psy8499         467 FYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL  543 (591)
Q Consensus       467 f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~  543 (591)
                      |.+...|..|+++|++.+ |.|++|++.|.+...|..|+++|+++++ +|++|++.|.++..|..|+++|++.+ |+|++
T Consensus        87 f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~C~~  166 (190)
T 2i13_A           87 FSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPE  166 (190)
T ss_dssp             ESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTT
T ss_pred             cCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeECCC
Confidence            777777777777777655 5777788888777778888777777766 78888888888888888888887765 57888


Q ss_pred             chhhcCChhhHHHHhhhcCCc
Q psy8499         544 CSKEFSTKHTLTEHMKLHQGI  564 (591)
Q Consensus       544 C~~~f~~~~~l~~H~~~h~~~  564 (591)
                      |+++|.++..|..|+++|+|+
T Consensus       167 C~~~f~~~~~L~~H~~~H~~~  187 (190)
T 2i13_A          167 CGKSFSRRDALNVHQRTHTGK  187 (190)
T ss_dssp             TCCEESSHHHHHHHHTTC---
T ss_pred             CCCccCCHHHHHHHHHhcCCC
Confidence            888888888888888888765

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=6.2e-30  Score=232.38  Aligned_cols=160  Identities=28%  Similarity=0.515  Sum_probs=123.9

Q ss_pred             CCCc--cccccccCChhhHHHHHHhhCC-ccccc--ccccccccchhhHHHHHHhhCCCC-CCCc--cCccccCChhhHH
Q psy8499         430 KNKC--NLCSKEFSCKSHLKEHMQVHQG-ITYKC--NLCSKEFYRKQNLTKHMKLHQGIK-KKCD--LCSKEFSTKCSLT  501 (591)
Q Consensus       430 ~~~C--~~C~~~f~~~~~l~~H~~~h~~-~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~-~~C~--~C~~~f~~~~~L~  501 (591)
                      .|.|  +.|++.|.+...|..|+++|.+ ++|.|  +.|++.|.+...|..|+++|++.+ |.|+  .|++.|.+...|.
T Consensus        12 ~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   91 (190)
T 1tf6_A           12 RYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMK   91 (190)
T ss_dssp             CCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHH
T ss_pred             ceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHH
Confidence            3667  5677777777777777777766 67777  677777777777777877777655 5777  7888888888888


Q ss_pred             HHH-hhhC-CCCC-CC--CcchhcccCchhHHHHHHhhcCCC-CCCCc--chhhcCChhhHHHHhhhcCCcccccCc---
Q psy8499         502 EHM-KLHQ-GIKK-KC--DLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFSTKHTLTEHMKLHQGIRYKCDL---  570 (591)
Q Consensus       502 ~H~-~~h~-~~~~-~C--~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~---  570 (591)
                      .|+ +.|. +.++ .|  +.|++.|.+...|..|+++|++++ |+|++  |+++|.+...|..|+++|++  |.|++   
T Consensus        92 ~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--~~C~~~~~  169 (190)
T 1tf6_A           92 KHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDS  169 (190)
T ss_dssp             HHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--CCCCSTTT
T ss_pred             HHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--CcCCCCCc
Confidence            887 4452 3333 77  778888888888888888888776 68877  88888888888888888887  88888   


Q ss_pred             CccccccchhHHhHhhhccCC
Q psy8499         571 CTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       571 C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |++.|.+...|..|+++|+|+
T Consensus       170 C~~~f~~~~~l~~H~~~h~~e  190 (190)
T 1tf6_A          170 CSFVGKTWTLYLKHVAECHQD  190 (190)
T ss_dssp             CCCCCSCHHHHHHHHTTCC--
T ss_pred             CCCccccHHHHHHHHHhhcCC
Confidence            999999999999999988875

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.95  E-value=1.3e-28  Score=223.57  Aligned_cols=154  Identities=29%  Similarity=0.537  Sum_probs=85.8

Q ss_pred             cchhccCCchhHHHHHHHhCCCC-CCc--cccccccCChhhHHHHHHhhCC-cccccc--cccccccchhhHHHHH-Hhh
Q psy8499         408 LCSKEFSRKRRLTEHMKLHLGIK-NKC--NLCSKEFSCKSHLKEHMQVHQG-ITYKCN--LCSKEFYRKQNLTKHM-KLH  480 (591)
Q Consensus       408 ~C~~~f~~~~~l~~H~~~h~~~~-~~C--~~C~~~f~~~~~l~~H~~~h~~-~~~~C~--~C~~~f~~~~~L~~H~-~~h  480 (591)
                      .|++.|.+...|..|++.|.+.+ +.|  +.|++.|.+...|..|+++|.+ ++|.|+  .|++.|.+...|..|+ +.|
T Consensus        19 ~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h   98 (190)
T 1tf6_A           19 DCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFH   98 (190)
T ss_dssp             TTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTS
T ss_pred             CCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhc
Confidence            34444444444444444443332 445  4555555555555555555554 456665  5666666666666665 333


Q ss_pred             C-CC-CCCC--ccCccccCChhhHHHHHhhhCCCCC-CCCc--chhcccCchhHHHHHHhhcCCCCCCCc---chhhcCC
Q psy8499         481 Q-GI-KKKC--DLCSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFSCKRSVTEHMKLHLGIKNKCDL---CSKEFST  550 (591)
Q Consensus       481 ~-~~-~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~---C~~~f~~  550 (591)
                      . +. .|.|  +.|++.|.+...|..|+++|+++++ +|++  |++.|.+...|..|+++|+|  ++|..   |++.|.+
T Consensus        99 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~--~~C~~~~~C~~~f~~  176 (190)
T 1tf6_A           99 NIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKT  176 (190)
T ss_dssp             STTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS--CCCCSTTTCCCCCSC
T ss_pred             CCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC--CcCCCCCcCCCcccc
Confidence            1 11 2556  5566666666666666666666554 6655  66666666666666666665  55666   6666666


Q ss_pred             hhhHHHHhhhcCC
Q psy8499         551 KHTLTEHMKLHQG  563 (591)
Q Consensus       551 ~~~l~~H~~~h~~  563 (591)
                      ...|..|+++|++
T Consensus       177 ~~~l~~H~~~h~~  189 (190)
T 1tf6_A          177 WTLYLKHVAECHQ  189 (190)
T ss_dssp             HHHHHHHHTTCC-
T ss_pred             HHHHHHHHHhhcC
Confidence            6666666666654

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=7.7e-26  Score=198.14  Aligned_cols=138  Identities=31%  Similarity=0.637  Sum_probs=107.5

Q ss_pred             CCccccccccCChhhHHHHHH---hhCC-cccccccccccccchhhHHHHHHhhCCCCCCCccCccccCChhhHHHHHhh
Q psy8499         431 NKCNLCSKEFSCKSHLKEHMQ---VHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKL  506 (591)
Q Consensus       431 ~~C~~C~~~f~~~~~l~~H~~---~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~  506 (591)
                      ++|+.|++.|.+...|..|++   +|.+ ++|.|++|+                      |+.|++.|.+...|..|+++
T Consensus         4 ~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~----------------------C~~c~~~f~~~~~l~~H~~~   61 (155)
T 2gli_A            4 CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG----------------------CSRELRPFKAQYMLVVHMRR   61 (155)
T ss_dssp             CCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT----------------------CTTTTCCCSSHHHHHHHTHH
T ss_pred             CCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC----------------------ccchhhhhhhHHHHHHHHHh
Confidence            345555555555555555554   3333 455555442                      56667888888888888888


Q ss_pred             hCCCCC-CCCc--chhcccCchhHHHHHHhhcCCC-CCCCc--chhhcCChhhHHHHh-hhcCCc-ccccCc--Cccccc
Q psy8499         507 HQGIKK-KCDL--CSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFSTKHTLTEHM-KLHQGI-RYKCDL--CTKEFS  576 (591)
Q Consensus       507 h~~~~~-~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~C~~--C~~~f~~~~~l~~H~-~~h~~~-~~~C~~--C~~~f~  576 (591)
                      |+++++ .|++  |++.|.+...|..|+++|++.+ +.|++  |+++|.+...|..|+ ++|++. ||.|++  |+++|.
T Consensus        62 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~  141 (155)
T 2gli_A           62 HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYT  141 (155)
T ss_dssp             HHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEES
T ss_pred             cCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccC
Confidence            888776 8875  9999999999999999888876 68998  999999999999998 788875 899988  999999


Q ss_pred             cchhHHhHhhhccC
Q psy8499         577 RKGRLTEHMKLHLG  590 (591)
Q Consensus       577 ~~~~l~~H~~~H~~  590 (591)
                      +.+.|..|+++|+|
T Consensus       142 ~~~~L~~H~~~hhg  155 (155)
T 2gli_A          142 DPSSLRKHVKTVHG  155 (155)
T ss_dssp             SHHHHHHHHHHSCC
T ss_pred             CHHHHHHHHHhhcC
Confidence            99999999999987

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=1.3e-24  Score=190.39  Aligned_cols=139  Identities=30%  Similarity=0.569  Sum_probs=65.4

Q ss_pred             ccccccccccccCCHHHHHHHHH---HhCCCC-CccccchhccCCchhHHHHHHHhCCCCCCccccccccCChhhHHHHH
Q psy8499         375 ITYKCDLCLKEYSNKIYLTEHLK---LHQGIK-NKCVLCSKEFSRKRRLTEHMKLHLGIKNKCNLCSKEFSCKSHLKEHM  450 (591)
Q Consensus       375 ~~~~C~~C~~~f~~~~~l~~H~~---~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~  450 (591)
                      .+|.|+.|++.|.+...|..|++   +|.+.+ +.|++|+                      |+.|++.|.+...|..|+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~----------------------C~~c~~~f~~~~~l~~H~   59 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGG----------------------CSRELRPFKAQYMLVVHM   59 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTT----------------------CTTTTCCCSSHHHHHHHT
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCC----------------------ccchhhhhhhHHHHHHHH
Confidence            45667777777777777777766   343333 4444432                      333444444444444444


Q ss_pred             HhhCC-ccccccc--ccccccchhhHHHHHHhhCCCC-CCCcc--CccccCChhhHHHHH-hhhCCCCC-CCCc--chhc
Q psy8499         451 QVHQG-ITYKCNL--CSKEFYRKQNLTKHMKLHQGIK-KKCDL--CSKEFSTKCSLTEHM-KLHQGIKK-KCDL--CSKE  520 (591)
Q Consensus       451 ~~h~~-~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~-~~C~~--C~~~f~~~~~L~~H~-~~h~~~~~-~C~~--C~~~  520 (591)
                      ++|.+ +||.|++  |++.|.+...|..|+++|++.+ |.|++  |++.|.+...|..|+ ++|.++++ +|++  |++.
T Consensus        60 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~  139 (155)
T 2gli_A           60 RRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKR  139 (155)
T ss_dssp             HHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCE
T ss_pred             HhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccc
Confidence            44443 3444442  4444444444444444444333 34444  444444444444444 34444333 4433  4444


Q ss_pred             ccCchhHHHHHHhhc
Q psy8499         521 FSCKRSVTEHMKLHL  535 (591)
Q Consensus       521 f~~~~~l~~H~~~h~  535 (591)
                      |.++..|..|+++|+
T Consensus       140 f~~~~~L~~H~~~hh  154 (155)
T 2gli_A          140 YTDPSSLRKHVKTVH  154 (155)
T ss_dssp             ESSHHHHHHHHHHSC
T ss_pred             cCCHHHHHHHHHhhc
Confidence            444444444444433

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.84  E-value=2e-22  Score=169.27  Aligned_cols=91  Identities=24%  Similarity=0.464  Sum_probs=68.8

Q ss_pred             HHHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCc
Q psy8499         448 EHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCK  524 (591)
Q Consensus       448 ~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~  524 (591)
                      .|.++|.| ++|.|++||+.|.+...|..|+++|++++ |.|++|+++|.+...|..|+++|+++++ .|++|++.|.++
T Consensus        12 h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~   91 (133)
T 2lt7_A           12 HYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINY   91 (133)
T ss_dssp             EEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSH
T ss_pred             hceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCH
Confidence            34456677 67888888888888888888888887765 6788888888888888888877777766 777777777777


Q ss_pred             hhHHHHHHhhcCCC
Q psy8499         525 RSVTEHMKLHLGIK  538 (591)
Q Consensus       525 ~~l~~H~~~h~~~~  538 (591)
                      ..|..|+++|++++
T Consensus        92 ~~L~~H~~~hh~~~  105 (133)
T 2lt7_A           92 QFMSSHIKSVHSQD  105 (133)
T ss_dssp             HHHHHHHHHHTCCC
T ss_pred             HHHHHHhHHhcCCC
Confidence            77777777766543

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.83  E-value=4.7e-21  Score=160.65  Aligned_cols=106  Identities=33%  Similarity=0.617  Sum_probs=58.4

Q ss_pred             CCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHh---hcCCC-CCCCcchhhcCChhhHHHHhh
Q psy8499         485 KKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKL---HLGIK-NKCDLCSKEFSTKHTLTEHMK  559 (591)
Q Consensus       485 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~---h~~~~-~~C~~C~~~f~~~~~l~~H~~  559 (591)
                      |.|++|++.|.+...|..|+++|+++++ .|++|++.|.+...|..|++.   |.+.+ +.|++|++.|.+...|..|++
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~   87 (124)
T 2dlq_A            8 VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMV   87 (124)
T ss_dssp             CCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHHHH
T ss_pred             CCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHHHH
Confidence            3444444444444444444444444333 444444444444444444443   22222 466666666666666777766


Q ss_pred             hcCCc-ccccCcCccccccchhHHhHhhh-ccC
Q psy8499         560 LHQGI-RYKCDLCTKEFSRKGRLTEHMKL-HLG  590 (591)
Q Consensus       560 ~h~~~-~~~C~~C~~~f~~~~~l~~H~~~-H~~  590 (591)
                      +|++. ||.|++|++.|.+...|..|++. |.|
T Consensus        88 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~  120 (124)
T 2dlq_A           88 SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSG  120 (124)
T ss_dssp             HHSSSCSEECSSSCCEESSHHHHHHHHHHTSSC
T ss_pred             HcCCCCCccCCCccchhCCHHHHHHHHHHHCCC
Confidence            66654 67777777777777777777663 443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.83  E-value=3e-21  Score=160.53  Aligned_cols=104  Identities=32%  Similarity=0.702  Sum_probs=67.0

Q ss_pred             CCCcc--CccccCChhhHHHHHhhhCCCCC-CCC--cchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHh
Q psy8499         485 KKCDL--CSKEFSTKCSLTEHMKLHQGIKK-KCD--LCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHM  558 (591)
Q Consensus       485 ~~C~~--C~~~f~~~~~L~~H~~~h~~~~~-~C~--~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~  558 (591)
                      |.|++  |++.|.+...|..|+++|++.++ .|+  .|++.|.+...|..|+++|++.+ +.|++|++.|.+...|..|+
T Consensus         7 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   86 (119)
T 2jp9_A            7 FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHT   86 (119)
T ss_dssp             BCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHH
T ss_pred             eeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHHHH
Confidence            45554  55555555555555555555544 555  46666666666666666666554 56777777777777777777


Q ss_pred             hhcCCc-cccc--CcCccccccchhHHhHhhhc
Q psy8499         559 KLHQGI-RYKC--DLCTKEFSRKGRLTEHMKLH  588 (591)
Q Consensus       559 ~~h~~~-~~~C--~~C~~~f~~~~~l~~H~~~H  588 (591)
                      ++|++. +|.|  ++||+.|.+.+.|..|+++|
T Consensus        87 ~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           87 RTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            777654 6777  67777777777777777766

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.83  E-value=8e-22  Score=165.54  Aligned_cols=100  Identities=26%  Similarity=0.457  Sum_probs=61.0

Q ss_pred             HhhCCCC-CCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhH
Q psy8499         478 KLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTL  554 (591)
Q Consensus       478 ~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l  554 (591)
                      ++|.|++ |.|++||++|.+...|..|+++|+++++ +|++|++.|.+...|..|+++|+|++ +.|++||++|.++..|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            4455544 5666666666666666666666666655 66666666666666666666666654 4666666666666666


Q ss_pred             HHHhhhcCCc-------ccccCcCcccccc
Q psy8499         555 TEHMKLHQGI-------RYKCDLCTKEFSR  577 (591)
Q Consensus       555 ~~H~~~h~~~-------~~~C~~C~~~f~~  577 (591)
                      ..|+++|++.       +|+|.+|++.|..
T Consensus        95 ~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A           95 SSHIKSVHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             HHHHHHHTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             HHHhHHhcCCCCCCCCCCeecCCCCchhhh
Confidence            6666665431       3666666665543

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.83  E-value=5.4e-21  Score=167.07  Aligned_cols=114  Identities=26%  Similarity=0.557  Sum_probs=84.0

Q ss_pred             cccccccccccccchhhHHHHHHh-hCCCC---------CCCccCccccCChhhHHHHHhhhCCCCC-CCCc--chhccc
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKL-HQGIK---------KKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFS  522 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~-h~~~~---------~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~--C~~~f~  522 (591)
                      .+|.|+.|++.|.+...|..|++. |.+.+         |.|++|++.|.+...|..|+++|+++++ .|++  |++.|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            456677777777777777777766 44433         5677788888877778888777777766 7776  888888


Q ss_pred             CchhHHHHHHhhcCCC-CCCCc--chhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         523 CKRSVTEHMKLHLGIK-NKCDL--CSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       523 ~~~~l~~H~~~h~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      +...|..|+++|++.+ |.|++  |++.|.+...|..|+++|++. ||.|+
T Consensus       104 ~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            8888888887777765 67876  888888888888888887764 77774

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.82  E-value=1.3e-20  Score=157.80  Aligned_cols=108  Identities=30%  Similarity=0.594  Sum_probs=54.4

Q ss_pred             cccccc--cccccccchhhHHHHHHhhCCCCCCCccCccccCChhhHHHHHhhhCCCCC-CCCc--chhcccCchhHHHH
Q psy8499         456 ITYKCN--LCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDL--CSKEFSCKRSVTEH  530 (591)
Q Consensus       456 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~--C~~~f~~~~~l~~H  530 (591)
                      ++|.|+  .|++.|.+...|..|+++|....|.|++|++.|.+...|..|+++|+++++ .|++  |++.|.+...|..|
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H   83 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH   83 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGGSCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHcCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHH
Confidence            345555  555555555555555555533334555555555555555555555555444 4543  55555555555555


Q ss_pred             HHhhcCCC-CCCC--cchhhcCChhhHHHHhhhcCC
Q psy8499         531 MKLHLGIK-NKCD--LCSKEFSTKHTLTEHMKLHQG  563 (591)
Q Consensus       531 ~~~h~~~~-~~C~--~C~~~f~~~~~l~~H~~~h~~  563 (591)
                      +++|++++ |.|+  .|+++|.+...|..|+++|++
T Consensus        84 ~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           84 VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             HHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             HHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            55554443 3443  244444444444444444443

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.82  E-value=1e-20  Score=157.28  Aligned_cols=106  Identities=31%  Similarity=0.711  Sum_probs=69.7

Q ss_pred             ccccccc--ccccccchhhHHHHHHhhCCCC-CCCc--cCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHH
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHMKLHQGIK-KKCD--LCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTE  529 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~-~~C~--~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~  529 (591)
                      ++|.|++  |++.|.+...|..|+++|.+.+ |.|+  .|++.|.+...|..|+++|+++++ .|++|++.|.+...|..
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   84 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKT   84 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             eeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHH
Confidence            4566665  6666666666666666665544 4666  566666666666666666666655 66666666666666666


Q ss_pred             HHHhhcCCC-CCC--CcchhhcCChhhHHHHhhhc
Q psy8499         530 HMKLHLGIK-NKC--DLCSKEFSTKHTLTEHMKLH  561 (591)
Q Consensus       530 H~~~h~~~~-~~C--~~C~~~f~~~~~l~~H~~~h  561 (591)
                      |+++|++++ ++|  +.|++.|.++..|..|+++|
T Consensus        85 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           85 HTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            766666655 466  66777777777777777665

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=2.6e-20  Score=156.05  Aligned_cols=104  Identities=32%  Similarity=0.559  Sum_probs=60.6

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhh---CCCCC-CCCcchhcccCchhHHHH
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLH---QGIKK-KCDLCSKEFSCKRSVTEH  530 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h---~~~~~-~C~~C~~~f~~~~~l~~H  530 (591)
                      .+|.|++|++.|.+...|..|+++|.+.+ |.|++|++.|.+...|..|++.|   .+.++ .|++|++.|.+...|..|
T Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H   85 (124)
T 2dlq_A            6 SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLH   85 (124)
T ss_dssp             SSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHHH
T ss_pred             CCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHHH
Confidence            45555555555555555555555555443 45555555555555555555542   33333 566666666666666666


Q ss_pred             HHhhcCCC-CCCCcchhhcCChhhHHHHhh
Q psy8499         531 MKLHLGIK-NKCDLCSKEFSTKHTLTEHMK  559 (591)
Q Consensus       531 ~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~  559 (591)
                      +++|++++ |.|++|++.|.++..|..|++
T Consensus        86 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           86 MVSHTGEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             HHHHSSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             HHHcCCCCCccCCCccchhCCHHHHHHHHH
Confidence            66666554 466666666666666666665

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.81  E-value=8.9e-21  Score=158.88  Aligned_cols=107  Identities=30%  Similarity=0.637  Sum_probs=97.7

Q ss_pred             CCCCc--cCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHhhcCCC-CCCCc--chhhcCChhhHHHH
Q psy8499         484 KKKCD--LCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFSTKHTLTEH  557 (591)
Q Consensus       484 ~~~C~--~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~--C~~~f~~~~~l~~H  557 (591)
                      .|.|+  .|++.|.+...|..|+++| +.++ .|++|++.|.+...|..|+++|++.+ +.|.+  |++.|.+...|..|
T Consensus         5 ~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H   83 (124)
T 1ubd_C            5 TIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTH   83 (124)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHHH
T ss_pred             cccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHHH
Confidence            47898  8999999999999999999 5555 99999999999999999999999887 69986  99999999999999


Q ss_pred             hhhcCCc-ccccC--cCccccccchhHHhHhhhccCC
Q psy8499         558 MKLHQGI-RYKCD--LCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       558 ~~~h~~~-~~~C~--~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +++|++. +|.|+  .||++|.+.+.|..|+++|+|+
T Consensus        84 ~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~  120 (124)
T 1ubd_C           84 VRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKA  120 (124)
T ss_dssp             HHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC--
T ss_pred             HHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHccc
Confidence            9999875 89996  5999999999999999999874

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.81  E-value=3.6e-20  Score=161.85  Aligned_cols=108  Identities=29%  Similarity=0.612  Sum_probs=100.5

Q ss_pred             CCCCccCccccCChhhHHHHHhh-hCCCC---------CCCCcchhcccCchhHHHHHHhhcCCC-CCCCc--chhhcCC
Q psy8499         484 KKKCDLCSKEFSTKCSLTEHMKL-HQGIK---------KKCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFST  550 (591)
Q Consensus       484 ~~~C~~C~~~f~~~~~L~~H~~~-h~~~~---------~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~--C~~~f~~  550 (591)
                      .|.|+.|++.|.+...|..|++. |.+..         ..|++|++.|.+...|..|+++|++.+ +.|.+  |++.|.+
T Consensus        25 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~  104 (155)
T 2rpc_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFAR  104 (155)
T ss_dssp             SSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEESC
T ss_pred             ccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccCC
Confidence            47999999999999999999998 66654         379999999999999999999999877 79998  9999999


Q ss_pred             hhhHHHHhhhcCCc-ccccCc--CccccccchhHHhHhhhccCC
Q psy8499         551 KHTLTEHMKLHQGI-RYKCDL--CTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       551 ~~~l~~H~~~h~~~-~~~C~~--C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ...|..|+++|++. ||.|++  |++.|.+...|..|+++|+|+
T Consensus       105 ~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~  148 (155)
T 2rpc_A          105 SENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSD  148 (155)
T ss_dssp             HHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSC
T ss_pred             HHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCC
Confidence            99999999999986 899998  999999999999999999985

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.68  E-value=2e-18  Score=142.18  Aligned_cols=94  Identities=22%  Similarity=0.272  Sum_probs=56.7

Q ss_pred             hhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHh--hcCCC--CCCCcchhhc--CChhhHHHHhhhcCCc-cccc
Q psy8499         497 KCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKL--HLGIK--NKCDLCSKEF--STKHTLTEHMKLHQGI-RYKC  568 (591)
Q Consensus       497 ~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~--h~~~~--~~C~~C~~~f--~~~~~l~~H~~~h~~~-~~~C  568 (591)
                      ...|..|+++|+++++ +|++|++.|.+...|..|+++  |.+.+  +.|++|++.|  .+...|..|+++|++. ||.|
T Consensus         4 ~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C   83 (115)
T 2dmi_A            4 GSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKC   83 (115)
T ss_dssp             CCCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBC
T ss_pred             chhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceEC
Confidence            3445556666665555 566666666666666666665  44333  2466666666  6666666666666653 6666


Q ss_pred             CcCccccccchhHHhHhhhccC
Q psy8499         569 DLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       569 ~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      ++||+.|.+...|..|+++|+.
T Consensus        84 ~~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           84 MYCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             SSSCCBCSSHHHHHHHHHHTTT
T ss_pred             CCCCCccCCHHHHHHHHHHhCC
Confidence            6666666666666666666553

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.67  E-value=3.9e-17  Score=129.62  Aligned_cols=79  Identities=33%  Similarity=0.723  Sum_probs=48.5

Q ss_pred             CCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccC
Q psy8499         513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       513 ~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      +|++|++.|.+...|..|+++|++.+ +.|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|+++|+|
T Consensus        10 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   89 (96)
T 2dmd_A           10 KCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTG   89 (96)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             ECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhcC
Confidence            55555555555555555555555544 46666666666666666666666553 56666666666666666666666665


Q ss_pred             C
Q psy8499         591 I  591 (591)
Q Consensus       591 ~  591 (591)
                      +
T Consensus        90 ~   90 (96)
T 2dmd_A           90 D   90 (96)
T ss_dssp             C
T ss_pred             C
Confidence            3

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.66  E-value=5.3e-17  Score=124.66  Aligned_cols=77  Identities=32%  Similarity=0.777  Sum_probs=33.8

Q ss_pred             cccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHhh
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLH  534 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h  534 (591)
                      |.|+.|++.|.+...|..|+++|.+.+ |.|+.|++.|.+...|..|+++|+++++ +|++|++.|.+...|..|+++|
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            2 FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             ccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            444444444444444444444444332 3444444444444444444444444333 4444444444444444444444

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.66  E-value=3e-17  Score=126.04  Aligned_cols=78  Identities=31%  Similarity=0.724  Sum_probs=58.2

Q ss_pred             CCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccC
Q psy8499         513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       513 ~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      +|++|++.|.+...|..|+++|.+.+ +.|++|++.|.+...|..|+++|++. +|.|++||+.|.+.+.|..|+++|+|
T Consensus         3 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A            3 DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             ECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHHC-
T ss_pred             cCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhhCC
Confidence            46677777777777777777776655 57777777777777777777777664 78888888888888888888888876

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.65  E-value=1.9e-16  Score=128.26  Aligned_cols=83  Identities=29%  Similarity=0.568  Sum_probs=54.0

Q ss_pred             CCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcC
Q psy8499         485 KKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQ  562 (591)
Q Consensus       485 ~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~  562 (591)
                      |.|++|++.|.+...|..|+++|++.++ .|++|++.|.+...|..|+++|++.+ ++|.+|++.|.+...|..|+++|+
T Consensus        18 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~   97 (106)
T 2ee8_A           18 FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM   97 (106)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHHTT
T ss_pred             eECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHHhC
Confidence            5677777777777777777766666555 66666666666666666666666654 566666666666666666666665


Q ss_pred             Cc-ccc
Q psy8499         563 GI-RYK  567 (591)
Q Consensus       563 ~~-~~~  567 (591)
                      +. ||.
T Consensus        98 ~~~~~~  103 (106)
T 2ee8_A           98 QTSSPT  103 (106)
T ss_dssp             SCCCCC
T ss_pred             CCCCCc
Confidence            53 443

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.65  E-value=5.3e-17  Score=127.16  Aligned_cols=79  Identities=35%  Similarity=0.808  Sum_probs=60.7

Q ss_pred             CCC--cchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhc
Q psy8499         513 KCD--LCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLH  588 (591)
Q Consensus       513 ~C~--~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H  588 (591)
                      .|+  .|++.|.+...|..|+++|++.+ +.|++|++.|.+...|..|+++|++. +|.|++|++.|.+.+.|..|+++|
T Consensus         6 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   85 (90)
T 1a1h_A            6 ACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIH   85 (90)
T ss_dssp             ECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             ECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHHHHh
Confidence            566  47777777777777777777655 57888888888888888888877664 788888888888888888888888


Q ss_pred             cCC
Q psy8499         589 LGI  591 (591)
Q Consensus       589 ~~~  591 (591)
                      +|+
T Consensus        86 ~~~   88 (90)
T 1a1h_A           86 LRQ   88 (90)
T ss_dssp             GC-
T ss_pred             ccc
Confidence            774

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.64  E-value=1.5e-17  Score=136.91  Aligned_cols=93  Identities=25%  Similarity=0.307  Sum_probs=55.4

Q ss_pred             hhHHHHHHhhCC-cccccccccccccchhhHHHHHHh--hCCCC--CCCccCcccc--CChhhHHHHHhhhCCCCC-CCC
Q psy8499         444 SHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKL--HQGIK--KKCDLCSKEF--STKCSLTEHMKLHQGIKK-KCD  515 (591)
Q Consensus       444 ~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~--h~~~~--~~C~~C~~~f--~~~~~L~~H~~~h~~~~~-~C~  515 (591)
                      ..|..|+++|++ +||.|++|++.|.....|..|+++  |.+.+  +.|++|++.|  .....|..|+++|+++++ +|+
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            445556666665 566666666666666666666666  44333  2466666665  566666666666665554 555


Q ss_pred             cchhcccCchhHHHHHHhhcC
Q psy8499         516 LCSKEFSCKRSVTEHMKLHLG  536 (591)
Q Consensus       516 ~C~~~f~~~~~l~~H~~~h~~  536 (591)
                      +|++.|..+..|..|+++|+.
T Consensus        85 ~C~k~f~~~~~L~~H~~~hh~  105 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHMIKTKH  105 (115)
T ss_dssp             SSCCBCSSHHHHHHHHHHTTT
T ss_pred             CCCCccCCHHHHHHHHHHhCC
Confidence            555555555555555555543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.64  E-value=4.1e-16  Score=126.19  Aligned_cols=83  Identities=30%  Similarity=0.641  Sum_probs=47.3

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHh
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKL  533 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~  533 (591)
                      ++|.|++|++.|.....|..|+++|++.+ |.|++|++.|.+...|..|+++|+++++ +|++|++.|.+...|..|+++
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~   95 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTL   95 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHH
Confidence            34555555555555555555555555443 4555555555555555555555555544 555566556555556666555


Q ss_pred             hcCCC
Q psy8499         534 HLGIK  538 (591)
Q Consensus       534 h~~~~  538 (591)
                      |++++
T Consensus        96 H~~~~  100 (106)
T 2ee8_A           96 HMQTS  100 (106)
T ss_dssp             TTSCC
T ss_pred             hCCCC
Confidence            55543

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.2e-16  Score=124.93  Aligned_cols=78  Identities=35%  Similarity=0.708  Sum_probs=52.4

Q ss_pred             CCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCC---cccccCcCccccccchhHHhHhh-h
Q psy8499         513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQG---IRYKCDLCTKEFSRKGRLTEHMK-L  587 (591)
Q Consensus       513 ~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~C~~C~~~f~~~~~l~~H~~-~  587 (591)
                      +|++|++.|.+...|..|+++|++.+ +.|++|++.|.+...|..|+++|++   .+|.|++|++.|.+...|..|++ +
T Consensus         9 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~~~   88 (95)
T 2yt9_A            9 ACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQV   88 (95)
T ss_dssp             ECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHHHT
T ss_pred             ECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHHHh
Confidence            56666666666666666666666554 4677777777777777777766665   46777777777777777777764 5


Q ss_pred             ccC
Q psy8499         588 HLG  590 (591)
Q Consensus       588 H~~  590 (591)
                      |.|
T Consensus        89 H~~   91 (95)
T 2yt9_A           89 HSG   91 (95)
T ss_dssp             SCC
T ss_pred             cCC
Confidence            655

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.8e-16  Score=123.88  Aligned_cols=81  Identities=36%  Similarity=0.715  Sum_probs=45.0

Q ss_pred             CCccccccccCChhhHHHHHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhC
Q psy8499         431 NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQ  508 (591)
Q Consensus       431 ~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~  508 (591)
                      |.|++|++.|.+...|..|+++|.+ ++|.|++|++.|.....|..|+++|++.+ |.|++|++.|.+...|..|+++|+
T Consensus         9 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~   88 (96)
T 2dmd_A            9 HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHT   88 (96)
T ss_dssp             CCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHHHTTCC
T ss_pred             eECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHhc
Confidence            4555555555555555555555554 45555555555555555555555555443 455555555555555555555555


Q ss_pred             CCC
Q psy8499         509 GIK  511 (591)
Q Consensus       509 ~~~  511 (591)
                      +++
T Consensus        89 ~~~   91 (96)
T 2dmd_A           89 GDS   91 (96)
T ss_dssp             SCC
T ss_pred             CCC
Confidence            543

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.62  E-value=2.1e-16  Score=123.70  Aligned_cols=82  Identities=34%  Similarity=0.773  Sum_probs=42.5

Q ss_pred             cccccc--cccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHH
Q psy8499         456 ITYKCN--LCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHM  531 (591)
Q Consensus       456 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~  531 (591)
                      +||.|+  .|++.|.....|..|+++|.+.+ |.|++|++.|.+...|..|+++|+++++ .|++|++.|.+...|..|+
T Consensus         3 k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   82 (90)
T 1a1h_A            3 RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHT   82 (90)
T ss_dssp             CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHH
T ss_pred             CceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHHH
Confidence            345554  35555555555555555554433 4555555555555555555555555444 5555555555555555555


Q ss_pred             HhhcCC
Q psy8499         532 KLHLGI  537 (591)
Q Consensus       532 ~~h~~~  537 (591)
                      ++|+|+
T Consensus        83 ~~H~~~   88 (90)
T 1a1h_A           83 KIHLRQ   88 (90)
T ss_dssp             GGGGC-
T ss_pred             HHhccc
Confidence            555443

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=2.5e-16  Score=128.44  Aligned_cols=82  Identities=38%  Similarity=0.826  Sum_probs=46.2

Q ss_pred             hCCCCC-CCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHh
Q psy8499         507 HQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTE  583 (591)
Q Consensus       507 h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~  583 (591)
                      |+++++ .| .|++.|.+...|..|+++|++.+ +.|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|..
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHR   83 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHH
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHH
Confidence            344444 55 55555555555555555555444 45555555555555566665555543 5666666666666666666


Q ss_pred             Hhhhcc
Q psy8499         584 HMKLHL  589 (591)
Q Consensus       584 H~~~H~  589 (591)
                      |+++|+
T Consensus        84 H~~~~~   89 (110)
T 2csh_A           84 HVTSCT   89 (110)
T ss_dssp             HHHHHH
T ss_pred             HHHHcc
Confidence            665554

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.60  E-value=2.5e-16  Score=127.60  Aligned_cols=89  Identities=20%  Similarity=0.335  Sum_probs=57.7

Q ss_pred             HhhCCCC-CCCccCccccCChhhHHHHHhhhCCCCCCCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHH
Q psy8499         478 KLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLT  555 (591)
Q Consensus       478 ~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~  555 (591)
                      +.|.+.+ |.|++|++.|.+...|..|+++|. ...+|++|++.|.....|..|++ |++++ |+|++|++.|.+...|.
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H~-~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~   86 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIW   86 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHHH-HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHHHHCC-CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHH
Confidence            4455544 577777777777777777777763 22367777777777777777764 66655 56777777777777777


Q ss_pred             HHhh-hcCCc-cccc
Q psy8499         556 EHMK-LHQGI-RYKC  568 (591)
Q Consensus       556 ~H~~-~h~~~-~~~C  568 (591)
                      .|++ +|+++ +|.|
T Consensus        87 ~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           87 RHQVEVHNQNNMAPT  101 (107)
T ss_dssp             HHHHHTSCCCCCCCC
T ss_pred             HHHHHHcCCCCCCCC
Confidence            7775 56554 5554

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.59  E-value=4.8e-16  Score=125.93  Aligned_cols=81  Identities=25%  Similarity=0.397  Sum_probs=44.1

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCCCCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHH-h
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMK-L  533 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~-~  533 (591)
                      ++|.|++|++.|.....|..|+++|. ..|.|++|++.|.....|..|++ |+++++ +|++|++.|.....|..|++ +
T Consensus        15 ~~~~C~~C~~~f~~~~~l~~H~~~H~-~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~~H~~~~   92 (107)
T 1wjp_A           15 EVYQCRLCNAKLSSLLEQGSHERLCR-NAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIWRHQVEV   92 (107)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHH-HSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHHHHHHHT
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHCC-CCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHHHHHHHH
Confidence            45555555555555555555555553 23555555555555555555553 555544 55555555555555555554 4


Q ss_pred             hcCCC
Q psy8499         534 HLGIK  538 (591)
Q Consensus       534 h~~~~  538 (591)
                      |.+++
T Consensus        93 H~~~~   97 (107)
T 1wjp_A           93 HNQNN   97 (107)
T ss_dssp             SCCCC
T ss_pred             cCCCC
Confidence            54443

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.58  E-value=4.8e-16  Score=109.29  Aligned_cols=54  Identities=26%  Similarity=0.574  Sum_probs=46.2

Q ss_pred             CCCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         538 KNKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       538 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +|+|++||++|.+...|..|+++|+|. ||.|++||++|.+.+.|..|+++|+|+
T Consensus         4 py~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            4 PFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            368888888888888888888888875 888888888888888888888888885

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.58  E-value=2.4e-15  Score=118.91  Aligned_cols=75  Identities=35%  Similarity=0.693  Sum_probs=39.0

Q ss_pred             CCccccccccCChhhHHHHHHhhCC-cccccccccccccchhhHHHHHHhhCCC---CCCCccCccccCChhhHHHHHh
Q psy8499         431 NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGI---KKKCDLCSKEFSTKCSLTEHMK  505 (591)
Q Consensus       431 ~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~---~~~C~~C~~~f~~~~~L~~H~~  505 (591)
                      +.|++|++.|.+...|..|+++|.+ ++|.|++|++.|.+...|..|++.|++.   .|.|++|++.|.+...|..|++
T Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~H~~   86 (95)
T 2yt9_A            8 VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIK   86 (95)
T ss_dssp             EECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHHHHH
T ss_pred             eECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHHHHH
Confidence            4455555555555555555555544 4555555555555555555555555542   2455555555555555555543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=2e-15  Score=123.05  Aligned_cols=79  Identities=37%  Similarity=0.796  Sum_probs=41.5

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHh
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKL  533 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~  533 (591)
                      ++|.| .|++.|.+...|..|++.|.+.+ |.|++|++.|.+...|..|+++|+++++ +|++|++.|.....|..|+++
T Consensus         9 k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   87 (110)
T 2csh_A            9 KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHVTS   87 (110)
T ss_dssp             CCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHHHHH
Confidence            45555 55555555555555555555443 4555555555555555555555555444 455555555555555555544


Q ss_pred             hc
Q psy8499         534 HL  535 (591)
Q Consensus       534 h~  535 (591)
                      |+
T Consensus        88 ~~   89 (110)
T 2csh_A           88 CT   89 (110)
T ss_dssp             HH
T ss_pred             cc
Confidence            43

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.56  E-value=1.5e-16  Score=123.84  Aligned_cols=78  Identities=22%  Similarity=0.452  Sum_probs=59.4

Q ss_pred             CCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCcccccCcCccccccchhHHhHhhhccC
Q psy8499         513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       513 ~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      .|++|++.|.+...|..|+++|++++ |.|++|+++|.+...|..|+++|++.+|.|+.|++.|.+...|..|++.+++
T Consensus         5 ~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~~~h~   83 (88)
T 1llm_C            5 QCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVARLKK   83 (88)
T ss_dssp             ECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             cCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHHHHHH
Confidence            67777777777777777777777665 5777788888888888888877777778888888888888888888777653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.56  E-value=1.4e-15  Score=106.92  Aligned_cols=57  Identities=28%  Similarity=0.676  Sum_probs=41.8

Q ss_pred             CcccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCCC
Q psy8499         455 GITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIK  511 (591)
Q Consensus       455 ~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~  511 (591)
                      ++||.|++||+.|...+.|..|+++|+|++ |.|++||++|.+.+.|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            367777777777777777777777777766 577777777777777777777777653

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.54  E-value=4.3e-15  Score=118.75  Aligned_cols=78  Identities=35%  Similarity=0.742  Sum_probs=59.1

Q ss_pred             CCCc--chhcccCchhHHHHHHhhcCCC-CCCC--cchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhh
Q psy8499         513 KCDL--CSKEFSCKRSVTEHMKLHLGIK-NKCD--LCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       513 ~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~C~--~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~  586 (591)
                      .|++  |++.|.....|..|+++|++.+ +.|.  .|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|++
T Consensus        17 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   96 (100)
T 2ebt_A           17 YCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMK   96 (100)
T ss_dssp             ECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHH
T ss_pred             EcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHH
Confidence            5665  7777777777777777777655 5775  5888888888888888877764 7888888888888888888888


Q ss_pred             hccC
Q psy8499         587 LHLG  590 (591)
Q Consensus       587 ~H~~  590 (591)
                      +|+|
T Consensus        97 ~H~~  100 (100)
T 2ebt_A           97 RHQN  100 (100)
T ss_dssp             HHCC
T ss_pred             HhCC
Confidence            8875

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.52  E-value=4.2e-15  Score=115.95  Aligned_cols=77  Identities=35%  Similarity=0.767  Sum_probs=56.7

Q ss_pred             CCCc--chhcccCchhHHHHHHhhcCCC-CCCC--cchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhh
Q psy8499         513 KCDL--CSKEFSCKRSVTEHMKLHLGIK-NKCD--LCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       513 ~C~~--C~~~f~~~~~l~~H~~~h~~~~-~~C~--~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~  586 (591)
                      .|++  |++.|.+...|..|+++|++.+ +.|+  .|++.|.+...|..|+++|++. +|.|++||+.|.+.+.|..|++
T Consensus         7 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   86 (89)
T 2wbs_A            7 TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMK   86 (89)
T ss_dssp             ECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGG
T ss_pred             eCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHH
Confidence            5666  7777777777777777666655 5775  4777777777777777777664 7888888888888888888888


Q ss_pred             hcc
Q psy8499         587 LHL  589 (591)
Q Consensus       587 ~H~  589 (591)
                      +|+
T Consensus        87 ~H~   89 (89)
T 2wbs_A           87 RHF   89 (89)
T ss_dssp             GGC
T ss_pred             hhC
Confidence            774

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.52  E-value=1.4e-14  Score=115.74  Aligned_cols=72  Identities=42%  Similarity=0.813  Sum_probs=31.0

Q ss_pred             cccccCChhhHHHHHHhhCC-cccccc--cccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhh
Q psy8499         436 CSKEFSCKSHLKEHMQVHQG-ITYKCN--LCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLH  507 (591)
Q Consensus       436 C~~~f~~~~~l~~H~~~h~~-~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h  507 (591)
                      |++.|.+...|..|+++|.+ ++|.|+  .|++.|.....|..|+++|++.+ |.|++|++.|.+...|..|+++|
T Consensus        23 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   98 (100)
T 2ebt_A           23 CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH   98 (100)
T ss_dssp             CCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHHHHHHHH
T ss_pred             CCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHHHHHHHh
Confidence            44444444444444444443 344443  24444444444444444444333 34444444444444444444444

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.51  E-value=9.6e-15  Score=113.87  Aligned_cols=72  Identities=39%  Similarity=0.790  Sum_probs=30.4

Q ss_pred             cccccCChhhHHHHHHhhCC-cccccc--cccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhh
Q psy8499         436 CSKEFSCKSHLKEHMQVHQG-ITYKCN--LCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLH  507 (591)
Q Consensus       436 C~~~f~~~~~l~~H~~~h~~-~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h  507 (591)
                      |++.|.+...|..|+++|.+ ++|.|+  .|++.|.....|..|+++|++.+ |.|++|++.|.+...|..|+++|
T Consensus        13 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           13 CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             TCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHGGGG
T ss_pred             CCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHHHHHhh
Confidence            44444444444444444443 344443  24444444444444444444332 34444444444444444444433

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.50  E-value=9.2e-16  Score=119.29  Aligned_cols=76  Identities=22%  Similarity=0.514  Sum_probs=33.8

Q ss_pred             ccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCCCCCCCcchhcccCchhHHHHHH
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSKEFSCKRSVTEHMK  532 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~  532 (591)
                      ||.|++|++.|.....|..|+++|++.+ |.|++|++.|.+...|..|+++|++....|+.|++.|.+...|..|++
T Consensus         3 ~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            3 PFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHILPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCCCcchHHHHHHHHHHHhhhHHHHH
Confidence            4444444444444444444444444433 344444444444444444444444322244444444444444444443

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.49  E-value=1.2e-14  Score=112.15  Aligned_cols=72  Identities=31%  Similarity=0.505  Sum_probs=43.8

Q ss_pred             cccccccCChhhHHHHHHhhCC-ccccccc--ccccccchhhHHHHHHhhCCCCCCCcc---CccccCChhhHHHHHhhh
Q psy8499         434 NLCSKEFSCKSHLKEHMQVHQG-ITYKCNL--CSKEFYRKQNLTKHMKLHQGIKKKCDL---CSKEFSTKCSLTEHMKLH  507 (591)
Q Consensus       434 ~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~~~C~~---C~~~f~~~~~L~~H~~~h  507 (591)
                      +.|++.|.+...|..|+++|.+ +||.|+.  |++.|.+...|..|+++|++  |.|+.   |++.|.+...|..|+++|
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~~H~~~h   84 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLKHVAEC   84 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHHHHHHHC
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            5566666666666666665554 5566655  66666666666666666665  55665   666666666666666554

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.49  E-value=8.8e-15  Score=112.98  Aligned_cols=73  Identities=26%  Similarity=0.414  Sum_probs=50.4

Q ss_pred             CcchhcccCchhHHHHHHhhcCCC-CCCCc--chhhcCChhhHHHHhhhcCCcccccCc---CccccccchhHHhHhhhc
Q psy8499         515 DLCSKEFSCKRSVTEHMKLHLGIK-NKCDL--CSKEFSTKHTLTEHMKLHQGIRYKCDL---CTKEFSRKGRLTEHMKLH  588 (591)
Q Consensus       515 ~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~C~~---C~~~f~~~~~l~~H~~~H  588 (591)
                      +.|++.|.+...|..|+++|++++ ++|++  |+++|.+...|..|+++|++  |.|+.   |++.|.+.+.|..|+++|
T Consensus         7 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--~~C~~~~~C~~~f~~~~~l~~H~~~h   84 (85)
T 2j7j_A            7 ENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG--YPCKKDDSCSFVGKTWTLYLKHVAEC   84 (85)
T ss_dssp             TTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS--EECCSCSSCCCEESSHHHHHHHHHHC
T ss_pred             CCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC--CCCCCCCCCCCccCCHHHHHHHHHhc
Confidence            566666666666666666666655 46766  77777777777777777766  77777   777777777777777766


Q ss_pred             c
Q psy8499         589 L  589 (591)
Q Consensus       589 ~  589 (591)
                      +
T Consensus        85 h   85 (85)
T 2j7j_A           85 H   85 (85)
T ss_dssp             C
T ss_pred             C
Confidence            4

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=2.9e-14  Score=113.02  Aligned_cols=70  Identities=17%  Similarity=0.258  Sum_probs=35.7

Q ss_pred             cCChhhHHHHHhhhCCCCC-CCCcchhccc-CchhHHHHHHhhcC-CC-CCCCcchhhcCChhhHHHHhhhcCC
Q psy8499         494 FSTKCSLTEHMKLHQGIKK-KCDLCSKEFS-CKRSVTEHMKLHLG-IK-NKCDLCSKEFSTKHTLTEHMKLHQG  563 (591)
Q Consensus       494 f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~-~~~~l~~H~~~h~~-~~-~~C~~C~~~f~~~~~l~~H~~~h~~  563 (591)
                      +.....+..|+++|.++++ +|++|++.|. ....|..|+++|++ ++ |.|.+|++.|.++..|..|+++|++
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcC
Confidence            3344445555555555444 5555555555 55555555555554 33 4555555555555555555555544

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=4.2e-14  Score=109.37  Aligned_cols=77  Identities=23%  Similarity=0.344  Sum_probs=61.3

Q ss_pred             hHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHhhcCC-----CCCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         499 SLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGI-----KNKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       499 ~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~-----~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +|.+|+++|+++++ .|++|++.|.....|..|+++|++.     +|.|++|++.|.+...|..|+++|++. +|.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            45677888887776 7888888888888888888776654     368888888888888888888888875 7888888


Q ss_pred             cccc
Q psy8499         572 TKEF  575 (591)
Q Consensus       572 ~~~f  575 (591)
                      +.+|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8765

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.41  E-value=9.4e-15  Score=122.78  Aligned_cols=68  Identities=22%  Similarity=0.396  Sum_probs=56.4

Q ss_pred             cCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCcccccCcCccccccchhHHhHhhhccCC
Q psy8499         522 SCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       522 ~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      .....|..|+ .|++++ |.|++||+.|.+...|..|+++| ..||.|++||++|.+.+.|..|+++|+|+
T Consensus        58 ~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           58 DESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            4566677776 466655 68999999999999999999988 67899999999999999999999999885

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=7.6e-14  Score=107.90  Aligned_cols=75  Identities=24%  Similarity=0.413  Sum_probs=45.1

Q ss_pred             HHHHHhhCC-cccccccccccccchhhHHHHHHhhCCC-----CCCCccCccccCChhhHHHHHhhhCCCCC-CCCcchh
Q psy8499         447 KEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGI-----KKKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSK  519 (591)
Q Consensus       447 ~~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~-----~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~  519 (591)
                      ..|+++|++ +||.|++|++.|.....|..|++.|++.     .|.|++|++.|.+...|..|+++|++.++ .|..|+.
T Consensus         4 ~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~   83 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGP   83 (86)
T ss_dssp             TCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCC
T ss_pred             ccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCC
Confidence            445566655 5666666666666666666666655543     25666666666666666666666666554 5666555


Q ss_pred             cc
Q psy8499         520 EF  521 (591)
Q Consensus       520 ~f  521 (591)
                      .|
T Consensus        84 ~~   85 (86)
T 1x6h_A           84 SS   85 (86)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.37  E-value=2.4e-13  Score=106.75  Aligned_cols=74  Identities=14%  Similarity=0.206  Sum_probs=49.2

Q ss_pred             cccCChhhHHHHHhhhCCCCC-CCCcchhcc-cCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHH-hhhcCCccc
Q psy8499         492 KEFSTKCSLTEHMKLHQGIKK-KCDLCSKEF-SCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEH-MKLHQGIRY  566 (591)
Q Consensus       492 ~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f-~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H-~~~h~~~~~  566 (591)
                      .+|.....|..|++.|.+.++ .|+.|++.| .+...|..|+++| +++ |.|.+|+++|..+..|..| +++|+++||
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            455666666777766666655 677777777 6777777777766 554 5677777777777777777 666666553

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=1.3e-13  Score=109.26  Aligned_cols=73  Identities=22%  Similarity=0.282  Sum_probs=41.8

Q ss_pred             cCChhhHHHHHHhhCC-ccccccccccccc-chhhHHHHHHhhCC-CC-CCCccCccccCChhhHHHHHhhhCCCCC
Q psy8499         440 FSCKSHLKEHMQVHQG-ITYKCNLCSKEFY-RKQNLTKHMKLHQG-IK-KKCDLCSKEFSTKCSLTEHMKLHQGIKK  512 (591)
Q Consensus       440 f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~-~~~~L~~H~~~h~~-~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~  512 (591)
                      +.....+..|+++|.+ ++|.|++|++.|. ....|..|+++|++ .+ |.|++|++.|.++..|..|+++|+++++
T Consensus         6 ~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp   82 (98)
T 2gqj_A            6 SGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKP   82 (98)
T ss_dssp             CCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCS
T ss_pred             CCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            3344445555555555 5566666666666 66666666666554 32 5666666666666666666666655544

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=2.8e-13  Score=102.76  Aligned_cols=64  Identities=36%  Similarity=0.703  Sum_probs=44.6

Q ss_pred             CCCc--chhcccCchhHHHHHH-hhcCCC-CCCCc--chhhcCChhhHHHHhhhcCCc-ccccCcCccccc
Q psy8499         513 KCDL--CSKEFSCKRSVTEHMK-LHLGIK-NKCDL--CSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFS  576 (591)
Q Consensus       513 ~C~~--C~~~f~~~~~l~~H~~-~h~~~~-~~C~~--C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~  576 (591)
                      .|+.  |++.|.+...|..|++ +|.+.+ +.|++  |++.|.++..|..|+++|++. ||.|++||++|.
T Consensus         9 ~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            9 PCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             cCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4444  7777777777777776 566655 57776  777777777777777777654 677777777773

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=5.2e-13  Score=104.78  Aligned_cols=70  Identities=17%  Similarity=0.244  Sum_probs=40.7

Q ss_pred             cccCchhHHHHHHhhcCCC-CCCCcchhhc-CChhhHHHHhhhcCCc-ccccCcCccccccchhHHhH-hhhccC
Q psy8499         520 EFSCKRSVTEHMKLHLGIK-NKCDLCSKEF-STKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEH-MKLHLG  590 (591)
Q Consensus       520 ~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f-~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H-~~~H~~  590 (591)
                      .|.....|..|+++|.+.+ +.|++|++.| .+...|..|+++| +. ||.|++||++|.+++.|..| +++|++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            4455555566665555444 4566666666 5666666666666 32 56666666666666666666 555554

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.34  E-value=5.8e-14  Score=117.91  Aligned_cols=67  Identities=24%  Similarity=0.502  Sum_probs=38.7

Q ss_pred             ChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHhhcCCCCCCCcchhhcCChhhHHHHhhhcCCc
Q psy8499         496 TKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGI  564 (591)
Q Consensus       496 ~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  564 (591)
                      ....|..|+ .|+++++ +|++|++.|.....|..|+++| ..+|.|++||++|.+...|..|+++|++.
T Consensus        59 ~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H-~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           59 ESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT-EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             THHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT-CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC-CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            444444444 3554444 5666666666666666666665 33356666666666666666666666553

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.34  E-value=2.1e-13  Score=101.25  Aligned_cols=61  Identities=36%  Similarity=0.644  Sum_probs=48.5

Q ss_pred             HHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         531 MKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       531 ~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      .++|++++ |+|++|++.|.+...|..|+++|++. ||+|++|++.|.+...|..|+++|+++
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            34666666 58888888888888888888888764 788888888888888888888888764

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.33  E-value=1.1e-13  Score=104.36  Aligned_cols=64  Identities=23%  Similarity=0.500  Sum_probs=45.8

Q ss_pred             HHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhh-hcCC--cccccCcCccccccchhHHhHhhhccC
Q psy8499         527 VTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMK-LHQG--IRYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       527 l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~-~h~~--~~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      |.+|+++|++++ |.|++|++.|.+...|..|++ .|.+  .+|+|++|++.|.+...|..|+++|++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            345667777666 577777777777777777776 5654  367777777777777777777777664

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=2.8e-13  Score=98.69  Aligned_cols=60  Identities=30%  Similarity=0.616  Sum_probs=52.6

Q ss_pred             HhhcCCC-CCCCcchhhcCChhhHHHHhhh-c-CC-cccccCcCccccccchhHHhHhhhccCC
Q psy8499         532 KLHLGIK-NKCDLCSKEFSTKHTLTEHMKL-H-QG-IRYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       532 ~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~-h-~~-~~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ++|+|++ |.|++|++.|.+...|..|+++ | .+ .||.|++||++|.+.+.|..|+++|+|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~i   66 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI   66 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC-
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcCC
Confidence            4677776 7999999999999999999998 6 34 4899999999999999999999999986

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=9e-13  Score=99.90  Aligned_cols=59  Identities=31%  Similarity=0.616  Sum_probs=23.2

Q ss_pred             cccccCChhhHHHHHH-hhCC-ccccccc--ccccccchhhHHHHHHhhCCCC-CCCccCcccc
Q psy8499         436 CSKEFSCKSHLKEHMQ-VHQG-ITYKCNL--CSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEF  494 (591)
Q Consensus       436 C~~~f~~~~~l~~H~~-~h~~-~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f  494 (591)
                      |++.|.+...|..|++ .|.+ ++|.|++  |++.|.....|..|+++|++++ |.|++|+++|
T Consensus        15 C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A           15 CGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             TCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4444444444444443 2332 3344433  4444444444444444443322 3344444333

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.30  E-value=6.3e-13  Score=100.78  Aligned_cols=53  Identities=26%  Similarity=0.609  Sum_probs=46.3

Q ss_pred             CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHh-hhccCC
Q psy8499         539 NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHM-KLHLGI  591 (591)
Q Consensus       539 ~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~-~~H~~~  591 (591)
                      +.|++||++|.++..|..|+++|++. ||.|++|+++|.++..|.+|+ ++|.++
T Consensus        29 h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           29 HLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             EECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTC
T ss_pred             EECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCC
Confidence            57999999999999999999999875 899999999999999999996 567764

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.29  E-value=1.5e-12  Score=91.56  Aligned_cols=54  Identities=31%  Similarity=0.648  Sum_probs=47.7

Q ss_pred             CCCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         538 KNKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       538 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +|.|++|++.|.+...|..|+++|++. ||.|++||++|.+.+.|..|+++|+++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            367999999999999999999998875 899999999999999999999999874

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.29  E-value=1.1e-12  Score=96.77  Aligned_cols=58  Identities=29%  Similarity=0.491  Sum_probs=44.0

Q ss_pred             hcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         534 HLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       534 h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |++++ |+|++|++.|.+...|..|+++|++. +|.|++|++.|.+...|..|+++|+|+
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence            44444 57888888888888888888887764 788888888888888888888887764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.28  E-value=1.1e-12  Score=92.21  Aligned_cols=53  Identities=30%  Similarity=0.638  Sum_probs=46.5

Q ss_pred             CCCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccC
Q psy8499         538 KNKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       538 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      +|.|++|++.|.+...|..|+++|++. ||.|++|++.|.+...|..|+++|++
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            478999999999999999999998865 89999999999999999999999885

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.27  E-value=2.2e-12  Score=96.28  Aligned_cols=53  Identities=36%  Similarity=0.811  Sum_probs=42.5

Q ss_pred             CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         539 NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       539 ~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |+|++|++.|.+...|..|+++|++. +|+|++|++.|.+...|.+|+++|+|+
T Consensus        18 ~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~   71 (74)
T 2lce_A           18 YKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGE   71 (74)
T ss_dssp             BCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCS
T ss_pred             eECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCC
Confidence            67888888888888888888888764 788888888888888888888888764

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=1.9e-12  Score=96.03  Aligned_cols=59  Identities=37%  Similarity=0.710  Sum_probs=34.9

Q ss_pred             hhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCC
Q psy8499         452 VHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGI  510 (591)
Q Consensus       452 ~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~  510 (591)
                      +|.+ +||.|++|++.|.....|..|+++|.+.+ |+|++|++.|.+...|..|+++|+++
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            3444 55666666666666666666666665544 46666666666666666666665543

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.25  E-value=4.1e-12  Score=95.63  Aligned_cols=56  Identities=38%  Similarity=0.701  Sum_probs=25.0

Q ss_pred             CCCcchhcccCchhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-cccc
Q psy8499         513 KCDLCSKEFSCKRSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKC  568 (591)
Q Consensus       513 ~C~~C~~~f~~~~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  568 (591)
                      +|++|++.|.....|..|+++|++.+ |+|++|++.|.+...|..|+++|++. ||+|
T Consensus        20 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           20 KCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             BCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             ECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            44444444444444444444444433 34444444444444444444444432 4443

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.24  E-value=3.7e-12  Score=93.83  Aligned_cols=57  Identities=30%  Similarity=0.456  Sum_probs=36.0

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCCCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIKK  512 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~~  512 (591)
                      ++|.|++|++.|.....|..|+++|++.+ |.|++|++.|.....|..|+++|+++++
T Consensus         8 ~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            8 HPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCC
Confidence            56666666666666666666666666554 5666666666666666666666665543

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.24  E-value=5.8e-12  Score=93.94  Aligned_cols=56  Identities=36%  Similarity=0.790  Sum_probs=31.9

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGIK  511 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~~  511 (591)
                      ++|.|+.|++.|.....|..|+++|++.+ |+|++|++.|.....|..|+++|++++
T Consensus        16 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k   72 (74)
T 2lce_A           16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEK   72 (74)
T ss_dssp             CSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSC
T ss_pred             CCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCC
Confidence            45555555555555555555555555544 455555555555555555555555544

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.23  E-value=5.5e-12  Score=94.88  Aligned_cols=58  Identities=38%  Similarity=0.741  Sum_probs=53.1

Q ss_pred             hcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         534 HLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       534 h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +.+.+ |.|++|++.|.+...|..|+++|++. ||.|++|++.|.+...|..|+++|+|+
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   72 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGS   72 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCC
Confidence            44444 79999999999999999999999875 899999999999999999999999985

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.23  E-value=6.2e-12  Score=88.38  Aligned_cols=53  Identities=32%  Similarity=0.631  Sum_probs=26.2

Q ss_pred             cccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCCC
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQGI  510 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~~  510 (591)
                      |.|+.|++.|.....|..|+++|++.+ |.|++|++.|.+...|..|+++|+++
T Consensus         2 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            2 YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSC
T ss_pred             CcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhccc
Confidence            445555555555555555555544433 34555555555555555555544443

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.22  E-value=1.6e-12  Score=97.80  Aligned_cols=62  Identities=23%  Similarity=0.511  Sum_probs=38.8

Q ss_pred             HHHHhhCC-cccccccccccccchhhHHHHHH-hhCCC--CCCCccCccccCChhhHHHHHhhhCC
Q psy8499         448 EHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMK-LHQGI--KKKCDLCSKEFSTKCSLTEHMKLHQG  509 (591)
Q Consensus       448 ~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~-~h~~~--~~~C~~C~~~f~~~~~L~~H~~~h~~  509 (591)
                      .|+++|++ +||.|++|++.|.....|..|++ .|.+.  .|+|++|++.|.+...|..|+++|++
T Consensus         5 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            5 SSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             ccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            45566665 56666666666666666666665 44442  35666666666666666666666554

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.20  E-value=8.5e-12  Score=94.54  Aligned_cols=49  Identities=24%  Similarity=0.549  Sum_probs=27.3

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHH
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHM  504 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~  504 (591)
                      ++|.|++||+.|.++..|..|+++|++++ |.|++|+++|.++..|.+|+
T Consensus        27 ~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~   76 (85)
T 2lv2_A           27 ECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHI   76 (85)
T ss_dssp             TTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHH
T ss_pred             CCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhC
Confidence            34555555555555555555555555544 45555555555555555554

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.19  E-value=1.1e-11  Score=88.19  Aligned_cols=54  Identities=31%  Similarity=0.767  Sum_probs=45.9

Q ss_pred             CCCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHh-hhccCC
Q psy8499         538 KNKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHM-KLHLGI  591 (591)
Q Consensus       538 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~-~~H~~~  591 (591)
                      +|.|++|++.|.+...|..|+++|++. ||.|++|++.|.+.+.|..|+ ++|.|.
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            367899999999999999999988875 899999999999999999996 677763

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.18  E-value=6.6e-12  Score=98.85  Aligned_cols=65  Identities=22%  Similarity=0.319  Sum_probs=49.0

Q ss_pred             CCCC-CCCcchhcccCchhHHHHHH-hh---cCCC-CCCCcchhhcCChhhHHHH-hhhcCCc-ccccCcCcc
Q psy8499         509 GIKK-KCDLCSKEFSCKRSVTEHMK-LH---LGIK-NKCDLCSKEFSTKHTLTEH-MKLHQGI-RYKCDLCTK  573 (591)
Q Consensus       509 ~~~~-~C~~C~~~f~~~~~l~~H~~-~h---~~~~-~~C~~C~~~f~~~~~l~~H-~~~h~~~-~~~C~~C~~  573 (591)
                      |+++ .|+.|++.|..+..|..|++ +|   .+++ |+|++||++|.++..|..| +++|++. ||.|+++..
T Consensus        15 gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           15 VEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            4444 78888888888888888876 47   3344 6888888888888888888 7888875 788887543

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.18  E-value=1.1e-11  Score=87.09  Aligned_cols=52  Identities=33%  Similarity=0.639  Sum_probs=25.5

Q ss_pred             ccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQ  508 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~  508 (591)
                      ||.|+.|++.|.+...|..|+++|++.+ |.|++|++.|.+...|..|+++|+
T Consensus         4 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh   56 (57)
T 3uk3_C            4 SRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHH   56 (57)
T ss_dssp             -CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC
T ss_pred             CccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhc
Confidence            4555555555555555555555554433 345555555555555555554443

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.17  E-value=8e-12  Score=90.81  Aligned_cols=54  Identities=33%  Similarity=0.728  Sum_probs=30.8

Q ss_pred             cccccccccccccchhhHHHHHHh-h-CCCC-CCCccCccccCChhhHHHHHhhhCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKL-H-QGIK-KKCDLCSKEFSTKCSLTEHMKLHQG  509 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~-h-~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~  509 (591)
                      +||.|+.|++.|.+...|..|++. | .+.+ |.|+.|++.|.+...|..|+++|++
T Consensus         9 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            9 HTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            456666666666666666666655 3 2322 4566666666666666666655554

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.16  E-value=9.6e-12  Score=97.92  Aligned_cols=62  Identities=24%  Similarity=0.336  Sum_probs=37.9

Q ss_pred             cccccccccccccchhhHHHHHH-hhC---CCC-CCCccCccccCChhhHHHH-HhhhCCCCC-CCCcc
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMK-LHQ---GIK-KKCDLCSKEFSTKCSLTEH-MKLHQGIKK-KCDLC  517 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~-~h~---~~~-~~C~~C~~~f~~~~~L~~H-~~~h~~~~~-~C~~C  517 (591)
                      +||.|+.||+.|..++.|..|++ +|+   +.+ |.|++||++|.++..|..| +++|+++++ +|.++
T Consensus        17 kpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~   85 (102)
T 2ghf_A           17 GGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMV   85 (102)
T ss_dssp             SSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEEC
T ss_pred             cCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcc
Confidence            46666666666666666666665 352   222 5666666666666666666 566666665 55553

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=2.4e-13  Score=101.35  Aligned_cols=70  Identities=19%  Similarity=0.305  Sum_probs=56.0

Q ss_pred             ChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHHhhcCCCCCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         496 TKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       496 ~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      ++..|..|+++|+++++ .|++|++.|.....|..      ..++.|++||+.|.+...|..|+++|++. ||.|++|
T Consensus         2 ~~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            2 SSGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             cchhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            34567778888887776 88888888888877765      44578999999999999999999988875 7999887

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=1.4e-11  Score=92.92  Aligned_cols=47  Identities=26%  Similarity=0.680  Sum_probs=24.4

Q ss_pred             CCCCcchhhcCChhhHHHHhhhcCC----cccccCcCccccccchhHHhHh
Q psy8499         539 NKCDLCSKEFSTKHTLTEHMKLHQG----IRYKCDLCTKEFSRKGRLTEHM  585 (591)
Q Consensus       539 ~~C~~C~~~f~~~~~l~~H~~~h~~----~~~~C~~C~~~f~~~~~l~~H~  585 (591)
                      |+|++|++.|.+...|..|+++|++    .+|.|++|++.|.+...|..|+
T Consensus         8 ~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~   58 (78)
T 2d9h_A            8 LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHR   58 (78)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHH
T ss_pred             eECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHH
Confidence            3555555555555555555555542    3455555555555555555555

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.12  E-value=3.3e-11  Score=85.62  Aligned_cols=48  Identities=29%  Similarity=0.775  Sum_probs=25.0

Q ss_pred             ccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHH
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHM  504 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~  504 (591)
                      ||.|+.|++.|.....|..|+++|++.+ |.|++|++.|.+...|..|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             cCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            4555555555555555555555554443 45555555555555555554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.11  E-value=4.8e-13  Score=99.65  Aligned_cols=68  Identities=21%  Similarity=0.388  Sum_probs=42.4

Q ss_pred             hhHHHHHHhhCC-cccccccccccccchhhHHHHHHhhCCCCCCCccCccccCChhhHHHHHhhhCCCCC-CCCcc
Q psy8499         444 SHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLC  517 (591)
Q Consensus       444 ~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C  517 (591)
                      ..|..|+++|.+ +||.|+.|++.|.....|..      ...|.|++|++.|.+...|..|+++|+++++ +|++|
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            445566666665 56777777777766666655      3345666666666666666666666666554 56554

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.07  E-value=3.4e-11  Score=89.44  Aligned_cols=57  Identities=32%  Similarity=0.786  Sum_probs=47.1

Q ss_pred             hhcCCC-CCCC--cchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhcc
Q psy8499         533 LHLGIK-NKCD--LCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       533 ~h~~~~-~~C~--~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~  589 (591)
                      +|.+.+ |.|+  .|++.|.+...|..|+++|++. +|.|++||++|.+.+.|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            345555 6886  5999999999999998888765 7999999999999999999998885

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=7.2e-11  Score=88.95  Aligned_cols=58  Identities=24%  Similarity=0.553  Sum_probs=38.6

Q ss_pred             hCC-cccccccccccccchhhHHHHHHhhCC----CCCCCccCccccCChhhHHHHHhh-hCCC
Q psy8499         453 HQG-ITYKCNLCSKEFYRKQNLTKHMKLHQG----IKKKCDLCSKEFSTKCSLTEHMKL-HQGI  510 (591)
Q Consensus       453 h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~----~~~~C~~C~~~f~~~~~L~~H~~~-h~~~  510 (591)
                      |++ +||.|++|++.|.....|..|+++|++    ..|.|++|++.|.....|..|++. |.+.
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~   65 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPAL   65 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTT
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            344 677777777777777777777777763    336777777777777777777743 4433

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.01  E-value=1.9e-10  Score=90.36  Aligned_cols=66  Identities=26%  Similarity=0.483  Sum_probs=40.4

Q ss_pred             CCCccCccccCChhhHHHHHhh-hCCCCC-CCCcchhcccCchhHHHHHHhhcCCCCCCCcchhhcCChhhHHHHhhhcC
Q psy8499         485 KKCDLCSKEFSTKCSLTEHMKL-HQGIKK-KCDLCSKEFSCKRSVTEHMKLHLGIKNKCDLCSKEFSTKHTLTEHMKLHQ  562 (591)
Q Consensus       485 ~~C~~C~~~f~~~~~L~~H~~~-h~~~~~-~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~l~~H~~~h~  562 (591)
                      +.|+.|++.|.+...|..|+++ |.+.++ .+..|                   ..+.|++|++.|.+...|..|+++|+
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c-------------------~~~~C~~C~k~f~~~~~L~~H~~~H~   86 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC-------------------YWEECPREGKSFKAKYKLVNHIRVHT   86 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC-------------------CCTTCSSTTCCCSSHHHHHHHHHHHH
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccce-------------------eccCCCCCCcccCCHHHHHHHHHhcC
Confidence            4566666666666666666665 555443 11111                   11577777777777777777777777


Q ss_pred             Cc-ccccC
Q psy8499         563 GI-RYKCD  569 (591)
Q Consensus       563 ~~-~~~C~  569 (591)
                      +. ||.|+
T Consensus        87 ~~k~~~C~   94 (95)
T 2ej4_A           87 GEKSGPSS   94 (95)
T ss_dssp             TCCCCSSC
T ss_pred             CCCCCCCC
Confidence            64 67775

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.00  E-value=3.3e-10  Score=88.98  Aligned_cols=55  Identities=27%  Similarity=0.532  Sum_probs=26.6

Q ss_pred             cccccccccccchhhHHHHHHh-hCCCC---------CCCccCccccCChhhHHHHHhhhCCCCC
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMKL-HQGIK---------KKCDLCSKEFSTKCSLTEHMKLHQGIKK  512 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~~-h~~~~---------~~C~~C~~~f~~~~~L~~H~~~h~~~~~  512 (591)
                      |.|+.|++.|.....|..|+++ |.+.+         |.|++|++.|.+...|..|+++|+++++
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~   90 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKS   90 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCC
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCC
Confidence            4455555555555555555544 44433         3444455555544445555444444443

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=98.99  E-value=9.4e-11  Score=87.00  Aligned_cols=53  Identities=36%  Similarity=0.826  Sum_probs=35.6

Q ss_pred             cccccc--cccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhC
Q psy8499         456 ITYKCN--LCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQ  508 (591)
Q Consensus       456 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~  508 (591)
                      ++|.|+  .|++.|.....|..|+++|.+.+ |.|++|++.|.+...|..|+++|+
T Consensus        18 ~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           18 RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             CccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            567775  47777777777777777766654 567777777777777777766653

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=3.1e-10  Score=82.21  Aligned_cols=50  Identities=24%  Similarity=0.384  Sum_probs=43.2

Q ss_pred             CCCCcchhhcCChhhHHHHhhhcCCc-ccccC-cCccccccchhHHhHhhhccC
Q psy8499         539 NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD-LCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       539 ~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~-~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      ++|+.|+++|. ...|..|+++ ++. ||.|+ .||++|..++.|..|+++|.+
T Consensus        11 ~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A           11 QPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             EECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             eeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            58999999999 8999999888 654 89999 899999999999999998864

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.89  E-value=6.4e-10  Score=80.49  Aligned_cols=52  Identities=23%  Similarity=0.338  Sum_probs=29.1

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC-CCCc-cCccccCChhhHHHHHhhhCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD-LCSKEFSTKCSLTEHMKLHQG  509 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~-~C~~~f~~~~~L~~H~~~h~~  509 (591)
                      +||.|+.|++.|. ...|..|+++ ++.+ |.|+ .||+.|..+..|..|+++|..
T Consensus         9 ~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            9 RTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            4555555555555 5555555555 4433 4555 555555555555555555544

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.87  E-value=7.6e-10  Score=81.75  Aligned_cols=50  Identities=28%  Similarity=0.721  Sum_probs=44.4

Q ss_pred             CCCCc--chhhcCChhhHHHHhhhcCCc-ccccCc--CccccccchhHHhHhhhc
Q psy8499         539 NKCDL--CSKEFSTKHTLTEHMKLHQGI-RYKCDL--CTKEFSRKGRLTEHMKLH  588 (591)
Q Consensus       539 ~~C~~--C~~~f~~~~~l~~H~~~h~~~-~~~C~~--C~~~f~~~~~l~~H~~~H  588 (591)
                      +.|..  |++.|.+...|..|+++|++. ||+|++  |++.|.+...|..|+++|
T Consensus        18 ~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           18 HICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             EECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             eeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            57888  999999999999999999875 899975  999999999999999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.84  E-value=8.4e-10  Score=73.30  Aligned_cols=43  Identities=26%  Similarity=0.274  Sum_probs=34.7

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +|+++|++++ |+|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            3677787776 68888888888888888888888775 7888877

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.8e-10  Score=73.20  Aligned_cols=43  Identities=28%  Similarity=0.342  Sum_probs=34.7

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      .|+++|++++ |+|++|++.|.+...|..|+++|++. ||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3677787776 68888888888888888888888875 7888877

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.84  E-value=8.2e-10  Score=73.35  Aligned_cols=42  Identities=26%  Similarity=0.353  Sum_probs=34.1

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            667777776 68888888888888888888888775 7888877

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.83  E-value=7.9e-10  Score=73.42  Aligned_cols=42  Identities=33%  Similarity=0.357  Sum_probs=32.4

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566777766 57888888888888888888888764 7888876

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=72.86  Aligned_cols=43  Identities=26%  Similarity=0.348  Sum_probs=34.4

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      .|+++|++++ |+|++|+++|.++..|..|+++|++. ||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3667777776 68888888888888888888888775 7888877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.82  E-value=9.1e-10  Score=73.12  Aligned_cols=43  Identities=26%  Similarity=0.355  Sum_probs=33.5

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +|+++|++++ |+|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3667777766 68888888888888888888888765 7888876

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=7.4e-10  Score=73.56  Aligned_cols=42  Identities=31%  Similarity=0.370  Sum_probs=33.9

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            667777776 68888888888888888888888775 7888877

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1.1e-09  Score=72.69  Aligned_cols=42  Identities=31%  Similarity=0.353  Sum_probs=34.2

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            667777776 68888888888888888888888875 7888877

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=72.93  Aligned_cols=43  Identities=30%  Similarity=0.315  Sum_probs=33.4

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +|+++|++++ |+|++||++|.++..|..|+++|++. ||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3667777766 68888888888888888888888775 7888877

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=8.3e-10  Score=73.33  Aligned_cols=42  Identities=26%  Similarity=0.434  Sum_probs=33.9

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            667777766 68888888888888888888888775 7888877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=72.94  Aligned_cols=43  Identities=26%  Similarity=0.342  Sum_probs=34.4

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +|+++|++++ |+|++|++.|.+...|..|+++|++. ||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3667777776 68888888888888888888888775 7888877

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.82  E-value=1e-09  Score=72.84  Aligned_cols=43  Identities=28%  Similarity=0.394  Sum_probs=34.5

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      .|+++|++++ |.|++|+++|.+...|..|+++|++. ||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3677787776 68888888888888888888888775 7888877

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=9.7e-10  Score=72.98  Aligned_cols=42  Identities=26%  Similarity=0.293  Sum_probs=33.6

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            667777766 68888888888888888888888765 7888877

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.81  E-value=6.8e-10  Score=72.94  Aligned_cols=42  Identities=26%  Similarity=0.227  Sum_probs=31.6

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++||++|.++..|..|+++|++. ||.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            456677766 57888888888888888888887765 7888776

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=1e-09  Score=72.86  Aligned_cols=42  Identities=21%  Similarity=0.255  Sum_probs=33.5

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            567777766 68888888888888888888888765 7888877

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.81  E-value=7.8e-10  Score=73.45  Aligned_cols=43  Identities=28%  Similarity=0.400  Sum_probs=34.1

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +|+++|++++ |+|++||++|.+...|..|+++|++. ||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3667777776 58888888888888888888888765 7888877

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=9.6e-10  Score=73.01  Aligned_cols=43  Identities=23%  Similarity=0.295  Sum_probs=33.2

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +|+++|++++ |.|++|+++|.+...|..|+++|++. ||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3667777766 57888888888888888888888765 7888876

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.81  E-value=8.3e-10  Score=73.32  Aligned_cols=42  Identities=26%  Similarity=0.445  Sum_probs=32.6

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            667777766 57888888888888888888888765 7888876

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=8.1e-10  Score=73.39  Aligned_cols=42  Identities=24%  Similarity=0.381  Sum_probs=31.8

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|++.|.++..|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            666777766 57888888888888888888887764 7888776

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=9.4e-10  Score=73.06  Aligned_cols=42  Identities=26%  Similarity=0.324  Sum_probs=33.4

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            567777776 58888888888888888888888775 7888877

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=8.2e-10  Score=73.35  Aligned_cols=42  Identities=26%  Similarity=0.362  Sum_probs=33.2

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            667777766 58888888888888888888888765 7888877

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.80  E-value=8.2e-10  Score=73.35  Aligned_cols=42  Identities=29%  Similarity=0.396  Sum_probs=32.9

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|+++|.++..|..|+++|++. ||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            667777766 57888888888888888888888765 7888877

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=8.5e-10  Score=73.27  Aligned_cols=43  Identities=21%  Similarity=0.354  Sum_probs=33.6

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +|+++|++++ |.|++||+.|.+...|..|+++|++. ||+|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3667777766 58888888888888888888888765 7888877

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=8.7e-10  Score=73.22  Aligned_cols=42  Identities=26%  Similarity=0.314  Sum_probs=32.3

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++||++|.++..|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            666777766 57888888888888888888888765 7888776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1.2e-09  Score=72.56  Aligned_cols=43  Identities=26%  Similarity=0.356  Sum_probs=33.3

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +|+++|++++ |.|++||+.|.+...|..|+++|++. ||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3667777766 57888888888888888888888765 7888877

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=1e-09  Score=72.88  Aligned_cols=43  Identities=26%  Similarity=0.395  Sum_probs=33.2

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      .|+++|++++ |.|++|+++|.++..|..|+++|++. ||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3667777766 57888888888888888888888765 7888876

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=9.3e-10  Score=73.08  Aligned_cols=42  Identities=26%  Similarity=0.316  Sum_probs=33.1

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            667777766 58888888888888888888888765 7888877

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.79  E-value=9.2e-10  Score=73.09  Aligned_cols=42  Identities=31%  Similarity=0.411  Sum_probs=32.0

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            666777766 57888888888888888888887764 7888776

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.79  E-value=9.9e-10  Score=72.95  Aligned_cols=42  Identities=29%  Similarity=0.396  Sum_probs=32.5

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.+...|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            667777766 57888888888888888888888765 7888877

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.1e-09  Score=72.62  Aligned_cols=42  Identities=29%  Similarity=0.361  Sum_probs=32.2

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.+...|..|+++|++. ||+|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566777766 67888888888888888888888764 7888876

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.78  E-value=1.2e-09  Score=72.59  Aligned_cols=42  Identities=24%  Similarity=0.301  Sum_probs=33.0

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            667777766 57888888888888888888888765 7888877

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.2e-09  Score=72.56  Aligned_cols=43  Identities=26%  Similarity=0.365  Sum_probs=33.9

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      .|+++|++++ |+|++||++|.+...|..|+++|++. ||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3677777776 58888888888888888888888765 7888877

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=8.2e-10  Score=73.36  Aligned_cols=42  Identities=29%  Similarity=0.381  Sum_probs=30.8

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566777665 57777777777777777777777664 7777776

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.78  E-value=1.1e-09  Score=72.67  Aligned_cols=42  Identities=26%  Similarity=0.240  Sum_probs=31.8

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++||++|.++..|..|+++|++. ||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            666777766 57888888888888888888887765 7888776

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=1.3e-09  Score=72.35  Aligned_cols=42  Identities=26%  Similarity=0.270  Sum_probs=33.1

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++. ||+|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            566777766 58888888888888888888888775 7888877

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=8.5e-10  Score=73.27  Aligned_cols=42  Identities=24%  Similarity=0.394  Sum_probs=31.3

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|+++|.++..|..|+++|++. ||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            566777766 57888888888888888887777664 7888776

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.77  E-value=8.4e-10  Score=73.28  Aligned_cols=43  Identities=23%  Similarity=0.280  Sum_probs=31.5

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +|+++|++++ |.|++||++|.+...|..|+++|++. ||+|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3666777766 57777777777777777777777664 7777776

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=1.2e-09  Score=72.57  Aligned_cols=42  Identities=26%  Similarity=0.316  Sum_probs=32.8

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.+...|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            667777766 57888888888888888888888775 7888876

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=98.76  E-value=3.1e-09  Score=78.42  Aligned_cols=52  Identities=27%  Similarity=0.666  Sum_probs=29.2

Q ss_pred             ccccccc--ccccccchhhHHHHHHhhCCCC-CCCcc--CccccCChhhHHHHHhhh
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHMKLHQGIK-KKCDL--CSKEFSTKCSLTEHMKLH  507 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~-~~C~~--C~~~f~~~~~L~~H~~~h  507 (591)
                      ++|.|+.  |++.|.....|..|+++|++.+ |.|++  |++.|.....|..|+++|
T Consensus        16 ~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           16 RSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            3555655  6666666666666655555544 45543  555555555555555543

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.76  E-value=1.1e-09  Score=72.75  Aligned_cols=42  Identities=29%  Similarity=0.392  Sum_probs=33.5

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            667777776 58888888888888888888888765 7888877

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=98.76  E-value=2.8e-09  Score=70.72  Aligned_cols=42  Identities=33%  Similarity=0.479  Sum_probs=24.6

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455555 55666666666666666666666665544 455554

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.76  E-value=1.7e-10  Score=82.19  Aligned_cols=56  Identities=14%  Similarity=0.335  Sum_probs=46.7

Q ss_pred             HHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHh
Q psy8499         527 VTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHM  585 (591)
Q Consensus       527 l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~  585 (591)
                      |..|+++|+|++ |+|+.||++|.....|.   ++|++. ||.|++||++|....++..+.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~~   59 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPKK   59 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCCC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccccccc
Confidence            456788888887 69999999999988886   788875 899999999999888776553

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=2.3e-09  Score=70.30  Aligned_cols=42  Identities=24%  Similarity=0.314  Sum_probs=26.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3455555 56666666666666666666666666654 566655

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=8.7e-10  Score=73.22  Aligned_cols=42  Identities=26%  Similarity=0.356  Sum_probs=30.3

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            566677665 57777777777777777777777664 6777776

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.75  E-value=1.4e-09  Score=72.17  Aligned_cols=42  Identities=24%  Similarity=0.224  Sum_probs=32.0

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++||++|.+...|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566777766 57888888888888888888888765 7888776

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=1.2e-09  Score=72.56  Aligned_cols=42  Identities=29%  Similarity=0.351  Sum_probs=32.4

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++. ||+|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            566777766 57888888888888888888888764 7888776

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.75  E-value=3.6e-09  Score=72.93  Aligned_cols=45  Identities=29%  Similarity=0.387  Sum_probs=36.0

Q ss_pred             hcCCC-CCCCcchhhcCChhhHHHHhh-hcCCc-ccccCcCccccccc
Q psy8499         534 HLGIK-NKCDLCSKEFSTKHTLTEHMK-LHQGI-RYKCDLCTKEFSRK  578 (591)
Q Consensus       534 h~~~~-~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~C~~C~~~f~~~  578 (591)
                      |.+++ |.|++|++.|.+...|..|++ +|++. ||.|++|++.|.++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            44444 588899999999999999986 78775 89999999988763

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=98.75  E-value=2.9e-09  Score=70.64  Aligned_cols=42  Identities=26%  Similarity=0.477  Sum_probs=23.3

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4445554 45566666666666666666655555544 455554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.75  E-value=1.8e-09  Score=71.62  Aligned_cols=42  Identities=26%  Similarity=0.332  Sum_probs=33.1

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|++.|.++..|..|+++|++. ||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566777776 58888888888888888888888765 7888877

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=9.2e-10  Score=73.11  Aligned_cols=42  Identities=26%  Similarity=0.369  Sum_probs=31.8

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            666777766 57888888888888888888887764 7888776

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.75  E-value=2.8e-09  Score=70.68  Aligned_cols=42  Identities=29%  Similarity=0.453  Sum_probs=26.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++.+ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555555 56666666666666666666666666554 566655

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.75  E-value=7.9e-10  Score=76.31  Aligned_cols=45  Identities=16%  Similarity=0.185  Sum_probs=22.8

Q ss_pred             hhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccC
Q psy8499         546 KEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       546 ~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      +.|.....|..|+++|++. ||.|++||+.|.+.+.|..|+++|+|
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   49 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            3444444555555555443 45555555555555555555555544

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.9e-09  Score=70.60  Aligned_cols=42  Identities=31%  Similarity=0.566  Sum_probs=24.8

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455554 55666666666666666666666666554 456555

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=1.6e-09  Score=71.86  Aligned_cols=43  Identities=26%  Similarity=0.367  Sum_probs=33.0

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +|+++|++++ |.|++|+++|.++..|..|+++|++. ||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3667777766 57888888888888888888888765 7888765

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3.3e-09  Score=70.37  Aligned_cols=42  Identities=31%  Similarity=0.429  Sum_probs=23.7

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++.+ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4445554 45666666666666666666666655544 455554

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.8e-09  Score=70.66  Aligned_cols=42  Identities=31%  Similarity=0.470  Sum_probs=27.1

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++.+ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555655 56667777777766666666666666654 566655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.8e-09  Score=70.66  Aligned_cols=42  Identities=29%  Similarity=0.552  Sum_probs=25.8

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            4555555 56666666666666666666666666554 566555

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=3e-09  Score=70.52  Aligned_cols=42  Identities=33%  Similarity=0.479  Sum_probs=21.9

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444 45555555555555555555555555443 455544

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.74  E-value=2.5e-09  Score=71.37  Aligned_cols=42  Identities=24%  Similarity=0.296  Sum_probs=33.8

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhh-hcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMK-LHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |.|++|+++|.+...|..|++ +|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            667777776 688888888888888888888 88765 7888877

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.7e-09  Score=70.11  Aligned_cols=42  Identities=31%  Similarity=0.425  Sum_probs=26.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555655 56666666666666666666666666554 566654

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3e-09  Score=70.58  Aligned_cols=42  Identities=31%  Similarity=0.500  Sum_probs=20.6

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|+.|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            3344444 45555555555555555555555555443 445444

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.8e-09  Score=70.68  Aligned_cols=42  Identities=31%  Similarity=0.421  Sum_probs=27.0

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555655 56666666666666666666666666654 566655

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=2.9e-09  Score=70.65  Aligned_cols=42  Identities=31%  Similarity=0.516  Sum_probs=25.8

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            4555555 56666666666666666666666666554 566655

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.6e-09  Score=70.17  Aligned_cols=42  Identities=24%  Similarity=0.469  Sum_probs=21.6

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444 45555555555555555555555555443 455544

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.73  E-value=3.7e-09  Score=70.08  Aligned_cols=42  Identities=26%  Similarity=0.461  Sum_probs=25.8

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4555555 56666666666666666666666666554 566655

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.2e-09  Score=70.39  Aligned_cols=42  Identities=24%  Similarity=0.392  Sum_probs=22.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3444544 45555555555555555555555555544 455544

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=98.72  E-value=3.2e-09  Score=70.40  Aligned_cols=42  Identities=36%  Similarity=0.556  Sum_probs=26.6

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4555555 56666666666666666666666666654 566655

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.6e-09  Score=70.85  Aligned_cols=42  Identities=31%  Similarity=0.502  Sum_probs=24.3

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455554 55666666666666666666666665544 455554

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=98.72  E-value=2.8e-09  Score=70.68  Aligned_cols=41  Identities=27%  Similarity=0.365  Sum_probs=18.5

Q ss_pred             HHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         450 MQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       450 ~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      +++|++ +||.|+.|++.|...+.|..|+++|++++ |.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            4 GSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             cCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            334443 44444444444444444444444444433 344443

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.4e-09  Score=70.31  Aligned_cols=42  Identities=33%  Similarity=0.537  Sum_probs=27.0

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|+.|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            4555655 56667667776666666666666666654 566655

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=2.8e-09  Score=70.71  Aligned_cols=42  Identities=31%  Similarity=0.422  Sum_probs=27.4

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++||+.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            5556665 56777777777777777777766666654 566655

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.7e-09  Score=70.12  Aligned_cols=42  Identities=29%  Similarity=0.543  Sum_probs=26.7

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            4555555 56666666666666666666666666654 566655

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=3e-09  Score=70.56  Aligned_cols=42  Identities=21%  Similarity=0.370  Sum_probs=25.1

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455555 56666666666666666666666666544 456555

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.9e-09  Score=70.00  Aligned_cols=42  Identities=29%  Similarity=0.531  Sum_probs=26.0

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555555 56666666666666666666666666554 566555

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=1.5e-09  Score=71.99  Aligned_cols=42  Identities=24%  Similarity=0.265  Sum_probs=31.0

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|++.|.++..|..|+++|++. ||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            456677666 57778888888888888888777664 7888776

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.1e-09  Score=70.51  Aligned_cols=42  Identities=33%  Similarity=0.536  Sum_probs=28.0

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5556665 66777777777777777777777776655 566665

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.72  E-value=3.2e-09  Score=70.43  Aligned_cols=42  Identities=31%  Similarity=0.503  Sum_probs=25.3

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455555 56666666666666666666666666554 466555

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.5e-09  Score=70.22  Aligned_cols=42  Identities=26%  Similarity=0.314  Sum_probs=26.6

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++||+.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555555 56666666666666666666666666554 566655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.7e-09  Score=70.09  Aligned_cols=41  Identities=32%  Similarity=0.453  Sum_probs=20.6

Q ss_pred             HHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         450 MQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       450 ~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      +++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            4 GSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             SSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            344444 45555555555555555555555555443 445444

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.5e-09  Score=70.22  Aligned_cols=42  Identities=21%  Similarity=0.325  Sum_probs=21.4

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3444444 45555555555555555555555555443 455444

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.5e-09  Score=70.20  Aligned_cols=42  Identities=29%  Similarity=0.418  Sum_probs=21.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++.+ |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444 45555555555555555555555555443 455544

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.5e-09  Score=70.24  Aligned_cols=42  Identities=31%  Similarity=0.542  Sum_probs=20.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++.+ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            3444444 44555555555555555555555554443 444444

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=3.7e-09  Score=70.06  Aligned_cols=42  Identities=29%  Similarity=0.444  Sum_probs=24.1

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.+.+.|..|+++|++++ |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445554 55666666666666666666666665544 455554

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=98.71  E-value=3e-09  Score=70.58  Aligned_cols=42  Identities=29%  Similarity=0.456  Sum_probs=23.0

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4445544 45555555555555555555555555544 455544

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=3.4e-09  Score=70.30  Aligned_cols=42  Identities=29%  Similarity=0.452  Sum_probs=23.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            3445554 45666666666666666666666555544 455554

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=2.5e-09  Score=70.92  Aligned_cols=42  Identities=26%  Similarity=0.365  Sum_probs=32.3

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      |+++|++++ |+|++|++.|.+...|..|+++|++. ||+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            566777766 57888888888888888888888765 7888765

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.71  E-value=4.2e-09  Score=69.84  Aligned_cols=42  Identities=31%  Similarity=0.455  Sum_probs=27.8

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            4555665 56777777777777777777777776655 566665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=4.2e-09  Score=69.83  Aligned_cols=42  Identities=26%  Similarity=0.471  Sum_probs=24.8

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4555555 55666666666666666666666665544 455554

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=98.70  E-value=3.8e-09  Score=70.07  Aligned_cols=42  Identities=29%  Similarity=0.435  Sum_probs=24.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |+|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4455554 55666666666666666666666665544 455554

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=4.5e-09  Score=69.66  Aligned_cols=42  Identities=26%  Similarity=0.440  Sum_probs=26.7

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4455555 56666666666666666666666666654 566655

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=8.7e-09  Score=70.95  Aligned_cols=41  Identities=32%  Similarity=0.634  Sum_probs=27.7

Q ss_pred             cccccccccccccchhhHHHHHH-hhCCCC-CCCccCccccCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMK-LHQGIK-KKCDLCSKEFST  496 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~-~~C~~C~~~f~~  496 (591)
                      +||.|++|++.|.....|..|++ +|.+++ |.|++|++.|.+
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A           11 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            56777777777777777777765 666654 567777776654

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=4.9e-09  Score=69.51  Aligned_cols=42  Identities=21%  Similarity=0.314  Sum_probs=26.2

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++.+ |+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455555 56666666666666666666666666554 566655

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.70  E-value=3e-09  Score=70.57  Aligned_cols=42  Identities=31%  Similarity=0.508  Sum_probs=26.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4555555 56666666666666666666666666554 566655

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.69  E-value=3.6e-09  Score=70.18  Aligned_cols=42  Identities=31%  Similarity=0.475  Sum_probs=26.6

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++.+ |.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            4555555 56666666666666666666666666654 566655

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=4e-09  Score=69.94  Aligned_cols=42  Identities=24%  Similarity=0.344  Sum_probs=24.9

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |+|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455554 55666666666666666666666666554 456554

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=98.68  E-value=6e-09  Score=69.03  Aligned_cols=42  Identities=29%  Similarity=0.398  Sum_probs=25.2

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            3445555 56666666666666666666666666554 466555

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.67  E-value=5e-09  Score=69.43  Aligned_cols=42  Identities=29%  Similarity=0.456  Sum_probs=27.9

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|.+ +||.|++|++.|.....|..|+++|++++ |.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            4455555 56777777777777777777777776655 566665

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.66  E-value=3.2e-09  Score=70.41  Aligned_cols=42  Identities=26%  Similarity=0.492  Sum_probs=24.1

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |+|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4445554 55666666666666666666666665544 455554

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=6.4e-09  Score=68.92  Aligned_cols=42  Identities=31%  Similarity=0.497  Sum_probs=24.7

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4455555 56666666666666666666666666544 455543

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.65  E-value=7.8e-09  Score=68.48  Aligned_cols=41  Identities=27%  Similarity=0.391  Sum_probs=31.7

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |.|++|+++|.++..|..|+++|++. ||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            667777766 68888888888888888888888765 788764

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.64  E-value=8.2e-09  Score=68.39  Aligned_cols=42  Identities=26%  Similarity=0.350  Sum_probs=31.7

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      +|+++|++.+ |.|++|++.|.++..|..|+++|++. ||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            3667777766 68888888888888888888888765 788764

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=7.6e-09  Score=68.54  Aligned_cols=41  Identities=27%  Similarity=0.368  Sum_probs=31.1

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |+|++|+++|.+...|..|+++|++. ||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            666777766 67888888888888888888888765 787764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=9.7e-09  Score=68.02  Aligned_cols=42  Identities=26%  Similarity=0.501  Sum_probs=26.7

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555655 56677777777777667777766666654 566553

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=8.2e-09  Score=68.76  Aligned_cols=42  Identities=26%  Similarity=0.456  Sum_probs=21.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHH-hhCCCC-CCCccC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMK-LHQGIK-KKCDLC  490 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~-~~C~~C  490 (591)
                      |+++|.+ +||.|++|++.|.....|..|++ +|++.+ |.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            3444444 45555555555555555555555 555443 455444

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=8e-09  Score=68.43  Aligned_cols=41  Identities=27%  Similarity=0.373  Sum_probs=30.9

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |+|++|++.|.++..|..|+++|++. ||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            566777766 67888888888888888888888765 787764

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=7.5e-09  Score=68.57  Aligned_cols=41  Identities=27%  Similarity=0.311  Sum_probs=31.2

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |.|++|++.|.++..|..|+++|++. ||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            666777766 67888888888888888888888765 788764

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.63  E-value=8.8e-09  Score=68.23  Aligned_cols=41  Identities=29%  Similarity=0.396  Sum_probs=31.7

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |.|++|++.|.+...|..|+++|++. ||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            667777766 68888888888888888888888765 788764

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.62  E-value=6.4e-09  Score=67.35  Aligned_cols=40  Identities=25%  Similarity=0.390  Sum_probs=26.8

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            455666655 46777777777777777777777664 67664

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.62  E-value=9.3e-09  Score=66.57  Aligned_cols=40  Identities=25%  Similarity=0.351  Sum_probs=28.0

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |+|++|+++|.+...|..|+++|++. ||+|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666665 57777777777777777777777764 67764

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.62  E-value=6.1e-09  Score=69.01  Aligned_cols=41  Identities=27%  Similarity=0.370  Sum_probs=29.5

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |.|++|++.|.+...|..|+++|++. ||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566677665 57777777777777777777777764 677764

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=9.9e-09  Score=67.96  Aligned_cols=42  Identities=24%  Similarity=0.373  Sum_probs=31.1

Q ss_pred             HHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         529 EHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       529 ~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      +|+++|++++ |.|++|++.|.+...|..|+++|++. ||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            3666777766 57888888888888888888888764 787763

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=9e-09  Score=68.17  Aligned_cols=41  Identities=27%  Similarity=0.408  Sum_probs=31.5

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |+|++|++.|.++..|..|+++|++. ||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            566777766 68888888888888888888888765 788864

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.61  E-value=9.9e-09  Score=67.98  Aligned_cols=41  Identities=34%  Similarity=0.528  Sum_probs=31.0

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |+|++|++.|.+...|..|+++|++. ||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566777766 67888888888888888888888764 787764

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=1e-08  Score=67.90  Aligned_cols=41  Identities=29%  Similarity=0.419  Sum_probs=30.7

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |.|++|++.|.+...|..|+++|++. ||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566777766 67888888888888888888888764 787764

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=7e-09  Score=68.72  Aligned_cols=41  Identities=27%  Similarity=0.323  Sum_probs=29.7

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |+|++|+++|.+...|..|+++|++. ||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            566777666 57777777777777777777777764 677763

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.6e-09  Score=80.28  Aligned_cols=63  Identities=19%  Similarity=0.285  Sum_probs=47.2

Q ss_pred             hhHHHHHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccC
Q psy8499         525 RSVTEHMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       525 ~~l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      ..|..|+++|.+.+ +.|..|++.| ....|..|+ .|.+. ||.|+.|++.|. ...|..|+++|.+
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTT
T ss_pred             hHHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccC
Confidence            45666777777766 4788888888 488888888 67654 788888888776 4778888888776

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.60  E-value=1.3e-08  Score=63.77  Aligned_cols=35  Identities=31%  Similarity=0.611  Sum_probs=30.8

Q ss_pred             HhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         557 HMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       557 H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |+++|++. ||.|++|++.|.+.+.|..|+++|+|+
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            67788875 899999999999999999999999885

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=7.4e-09  Score=68.59  Aligned_cols=41  Identities=32%  Similarity=0.442  Sum_probs=29.5

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++. ||+|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566677665 57777777777777777777777764 677764

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=8.4e-09  Score=68.33  Aligned_cols=41  Identities=27%  Similarity=0.406  Sum_probs=29.4

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |+|++|++.|.+...|..|+++|++. ||+|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            566677665 57777777777777777777777764 677753

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.60  E-value=7.5e-09  Score=68.56  Aligned_cols=41  Identities=27%  Similarity=0.364  Sum_probs=29.6

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |+|++|++.|.+...|..|+++|++. ||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            566677665 57777777777777777777777764 677763

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=8.5e-09  Score=68.30  Aligned_cols=41  Identities=29%  Similarity=0.359  Sum_probs=30.3

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++.+ |.|++|+++|.+...|..|+++|++. ||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566777766 57888888888888888888887764 777764

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=8.7e-09  Score=68.24  Aligned_cols=40  Identities=28%  Similarity=0.275  Sum_probs=30.7

Q ss_pred             HhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         532 KLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       532 ~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      ++|++++ |.|++|++.|.+...|..|+++|++. ||.|++|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4566666 68888888888888888888888764 7888877

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=8e-09  Score=68.43  Aligned_cols=41  Identities=27%  Similarity=0.399  Sum_probs=29.4

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |+|++|++.|.++..|..|+++|++. ||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            566677666 57777777777777777777777764 677753

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=8.5e-09  Score=68.32  Aligned_cols=41  Identities=27%  Similarity=0.370  Sum_probs=30.3

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++.+ |+|++|+++|.+...|..|+++|++. ||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            566777666 57888888888888888888877764 777764

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.59  E-value=8.3e-09  Score=68.35  Aligned_cols=41  Identities=32%  Similarity=0.431  Sum_probs=31.7

Q ss_pred             HHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         531 MKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       531 ~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      +++|++++ |+|++|++.|.+...|..|+++|++. ||+|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            34666666 58888888888888888888888765 7888877

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.59  E-value=8.7e-09  Score=70.95  Aligned_cols=46  Identities=17%  Similarity=0.270  Sum_probs=24.9

Q ss_pred             cccCChhhHHHHHHhhCC-cccccccccccccchhhHHHHHHhhCCC
Q psy8499         438 KEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       438 ~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +.|.....|..|+++|++ +||.|++||+.|...+.|..|+++|+++
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   50 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFA   50 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTT
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            344455555555555554 4555555555555555555555555554

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.58  E-value=1.2e-08  Score=66.74  Aligned_cols=40  Identities=28%  Similarity=0.416  Sum_probs=29.2

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |.|++|++.|.+...|..|+++|++. ||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            566777665 67777777777777777777777764 67774

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=1.6e-08  Score=67.63  Aligned_cols=39  Identities=26%  Similarity=0.409  Sum_probs=31.9

Q ss_pred             cCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCcc
Q psy8499         535 LGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTK  573 (591)
Q Consensus       535 ~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~  573 (591)
                      .+.+ |.|++|++.|.+...|..|+++|++. ||.|++||+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            3444 68999999999999999999998875 899999985

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=1.8e-08  Score=66.28  Aligned_cols=40  Identities=23%  Similarity=0.375  Sum_probs=31.3

Q ss_pred             hhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCc
Q psy8499         533 LHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCT  572 (591)
Q Consensus       533 ~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~  572 (591)
                      +|++++ |+|++|++.|..+..|..|+++|++. +|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            456665 68888888888888888888888775 78888886

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=1.6e-08  Score=67.00  Aligned_cols=40  Identities=25%  Similarity=0.357  Sum_probs=30.1

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |+|++|++.|.+...|..|+++|++. ||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566777766 67888888888888888888888764 67775

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=9.2e-09  Score=68.14  Aligned_cols=41  Identities=29%  Similarity=0.447  Sum_probs=29.7

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++. ||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            566777665 57777777777777777777777764 677753

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=98.57  E-value=2e-09  Score=76.61  Aligned_cols=50  Identities=18%  Similarity=0.367  Sum_probs=29.2

Q ss_pred             HHHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhH
Q psy8499         448 EHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSL  500 (591)
Q Consensus       448 ~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L  500 (591)
                      .|+++|++ +||.|+.||+.|.....|.   ++|.+.+ |.|++||+.|....++
T Consensus         4 ~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            4 TDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            45555555 5666666666666665554   5565544 5666666666555443

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.57  E-value=7.8e-09  Score=68.49  Aligned_cols=41  Identities=27%  Similarity=0.401  Sum_probs=28.0

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      |+++|++++ |.|++|++.|.+...|..|+++|++. ||.|++
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            556666665 57777777777777777777777654 677753

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.56  E-value=3.6e-08  Score=64.85  Aligned_cols=39  Identities=28%  Similarity=0.586  Sum_probs=25.2

Q ss_pred             hCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccCc
Q psy8499         453 HQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCS  491 (591)
Q Consensus       453 h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~  491 (591)
                      |++ +||.|++|++.|.....|..|+++|++.+ |.|++||
T Consensus         5 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            5 SSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             cCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            444 56667777777766666777766666655 5666664

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.56  E-value=1.1e-08  Score=67.01  Aligned_cols=40  Identities=30%  Similarity=0.381  Sum_probs=27.7

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |+|++|+++|.+...|..|+++|++. ||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566666665 57777777777777777777777664 67764

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.55  E-value=1.3e-08  Score=66.66  Aligned_cols=40  Identities=30%  Similarity=0.436  Sum_probs=27.0

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++.+ |+|++|+++|.+...|..|+++|++. ||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            556666665 56777777777777777777777664 67664

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=98.55  E-value=2.2e-08  Score=64.80  Aligned_cols=39  Identities=31%  Similarity=0.566  Sum_probs=23.1

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS   41 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCC
Confidence            3445554 56666666666666666666666666544 444

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=98.55  E-value=2.1e-08  Score=66.31  Aligned_cols=40  Identities=25%  Similarity=0.477  Sum_probs=25.4

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++.+ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4555655 56666666666666666666666666654 4554

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=1.2e-08  Score=67.54  Aligned_cols=41  Identities=27%  Similarity=0.342  Sum_probs=28.8

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCC-c-ccccCc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQG-I-RYKCDL  570 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~-~-~~~C~~  570 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++ . ||+|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            566676665 5777777777777777777777776 4 677753

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=1.1e-08  Score=67.84  Aligned_cols=40  Identities=23%  Similarity=0.382  Sum_probs=28.7

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |+|++|++.|.+...|..|+++|++. ||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566677665 57777777777777777777777764 67775

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.54  E-value=2.1e-08  Score=66.39  Aligned_cols=40  Identities=33%  Similarity=0.522  Sum_probs=29.5

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |.|++|++.|.++..|..|+++|++. ||+|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            456677665 67888888888888888888877764 67775

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.54  E-value=2.4e-08  Score=66.05  Aligned_cols=40  Identities=30%  Similarity=0.438  Sum_probs=26.0

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4555655 56777777777777777777777666654 5554

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.6e-08  Score=65.93  Aligned_cols=40  Identities=35%  Similarity=0.600  Sum_probs=25.9

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++.+ |.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4555655 56777777777777777777777766654 4554

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=2.6e-08  Score=65.92  Aligned_cols=40  Identities=33%  Similarity=0.511  Sum_probs=25.2

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            4555555 56666666666666666666666666654 4554

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.53  E-value=3e-08  Score=64.09  Aligned_cols=35  Identities=26%  Similarity=0.505  Sum_probs=19.5

Q ss_pred             HHhhCC-cccccccccccccchhhHHHHHHhhCCCC
Q psy8499         450 MQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       450 ~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      +++|.+ +||.|++|++.|...+.|..|+++|++.+
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   37 (42)
T 2yte_A            2 SSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKS   37 (42)
T ss_dssp             CSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCS
T ss_pred             CcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCC
Confidence            344444 45566666666665555666655555543

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=1.3e-08  Score=67.36  Aligned_cols=40  Identities=25%  Similarity=0.402  Sum_probs=28.7

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |+|++|++.|.+...|..|+++|++. ||.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            566677665 57777777777777777777777654 67775

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=1.7e-08  Score=66.08  Aligned_cols=40  Identities=20%  Similarity=0.282  Sum_probs=27.3

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++. ||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            556666665 57777777777777777777777664 67664

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=1.9e-08  Score=65.07  Aligned_cols=39  Identities=26%  Similarity=0.496  Sum_probs=22.9

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-cccc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKC  568 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  568 (591)
                      |+++|++++ |+|++|+++|.+...|..|+++|++. ||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            345555554 46666666666666666666666553 5555

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.52  E-value=1.7e-08  Score=66.04  Aligned_cols=40  Identities=20%  Similarity=0.332  Sum_probs=26.0

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |+|++|+++|.+...|..|+++|++. ||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            556666655 46777777777777777777776654 66663

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=1.8e-08  Score=66.71  Aligned_cols=40  Identities=30%  Similarity=0.473  Sum_probs=30.0

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++.+ |.|++|++.|.....|..|+++|++. ||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            666777766 57888888888888888888887764 77775

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.8e-08  Score=65.74  Aligned_cols=40  Identities=30%  Similarity=0.575  Sum_probs=24.7

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ ++|.|++|++.|.....|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            4555555 56666666666666666666666666554 4554

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.5e-08  Score=65.99  Aligned_cols=40  Identities=33%  Similarity=0.560  Sum_probs=23.9

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4455555 56666666666666666666666666554 4554

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.6e-08  Score=65.88  Aligned_cols=40  Identities=30%  Similarity=0.482  Sum_probs=20.4

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444444 45555555555555555555555555443 3443

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=3e-08  Score=65.61  Aligned_cols=40  Identities=28%  Similarity=0.535  Sum_probs=20.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            3 SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             cccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444444 45555555555555555555555555443 3443

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=2.5e-08  Score=65.99  Aligned_cols=39  Identities=33%  Similarity=0.577  Sum_probs=23.4

Q ss_pred             hhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         452 VHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       452 ~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      +|++ +||.|++|++.|.....|..|+++|++.+ |.|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4444 56666666666666666666666666554 466555

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.52  E-value=1.5e-08  Score=67.06  Aligned_cols=40  Identities=30%  Similarity=0.369  Sum_probs=28.0

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |+|++|++.|.++..|..|+++|++. ||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            566666665 57777777777777777777777664 67775

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.6e-08  Score=65.89  Aligned_cols=39  Identities=33%  Similarity=0.564  Sum_probs=19.3

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      |+++|++ +||.|+.|++.|...+.|..|+++|++++ |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCC
Confidence            3444444 45555555555555555555555555443 344

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.6e-08  Score=65.85  Aligned_cols=35  Identities=31%  Similarity=0.667  Sum_probs=16.6

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|+++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   38 (46)
T 2eq2_A            3 SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGE   38 (46)
T ss_dssp             CCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCC
T ss_pred             cccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCC
Confidence            3344443 4455555555555555555554444443

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=1.5e-08  Score=65.49  Aligned_cols=39  Identities=33%  Similarity=0.529  Sum_probs=21.4

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-cccc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKC  568 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  568 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++. ||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            444555544 45555555555555555555555543 5554

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=2.8e-08  Score=65.73  Aligned_cols=40  Identities=28%  Similarity=0.546  Sum_probs=26.2

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            4556655 56777777777777777777777766654 5654

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.51  E-value=3.6e-08  Score=65.21  Aligned_cols=40  Identities=33%  Similarity=0.544  Sum_probs=22.2

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3445554 45666666666666666666666655544 4553

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.8e-08  Score=65.74  Aligned_cols=35  Identities=37%  Similarity=0.674  Sum_probs=17.0

Q ss_pred             HHhhCC-cccccccccccccchhhHHHHHHhhCCCC
Q psy8499         450 MQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       450 ~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      +++|++ +||.|++|++.|.....|..|+++|++.+
T Consensus         4 ~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k   39 (46)
T 2yti_A            4 GSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEK   39 (46)
T ss_dssp             CCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSC
T ss_pred             CcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCC
Confidence            344443 44555555555555555555555554433

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=3.3e-08  Score=65.38  Aligned_cols=40  Identities=25%  Similarity=0.515  Sum_probs=26.8

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5556665 66777777777777777777777776654 5554

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=2.9e-08  Score=64.89  Aligned_cols=40  Identities=25%  Similarity=0.342  Sum_probs=28.5

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ +.|++|++.|.+...|..|+++|++. ||+|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            456666665 57777777777777777777777764 67774

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.50  E-value=4.8e-08  Score=65.24  Aligned_cols=37  Identities=27%  Similarity=0.404  Sum_probs=22.2

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC-CCCccCcc
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSK  492 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~  492 (591)
                      ++|.|++|++.|.....|..|+++|++++ |.|++|++
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A           11 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            45666666666666666666666665544 56666653

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.9e-08  Score=65.64  Aligned_cols=40  Identities=30%  Similarity=0.498  Sum_probs=24.2

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++.+ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4455555 56666666666666666666666666554 4554

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.50  E-value=2.9e-08  Score=65.69  Aligned_cols=35  Identities=29%  Similarity=0.405  Sum_probs=18.7

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      +||.|++|++.|.....|..|+++|++++ |.|++|
T Consensus        11 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A           11 KPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             CTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45555555555555555555555555443 455544

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3e-08  Score=65.60  Aligned_cols=40  Identities=38%  Similarity=0.573  Sum_probs=20.2

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            3444444 45555555555555555555555555443 3443

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.4e-08  Score=65.31  Aligned_cols=39  Identities=26%  Similarity=0.528  Sum_probs=19.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++.+ |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            3 SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             cccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            3444444 45555555555555555555555555443 344

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.4e-08  Score=65.28  Aligned_cols=39  Identities=33%  Similarity=0.624  Sum_probs=19.3

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCT
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCC
Confidence            3344444 45555555555555555555555555443 344

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.49  E-value=3.1e-08  Score=65.50  Aligned_cols=40  Identities=35%  Similarity=0.621  Sum_probs=23.7

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4455554 56666666666666666666666666544 4554

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3e-08  Score=64.84  Aligned_cols=39  Identities=33%  Similarity=0.542  Sum_probs=22.8

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      |+++|++ +||.|++|++.|...+.|..|+++|++.+ |+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            4455554 55666666666666666666666665544 444

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3e-08  Score=65.57  Aligned_cols=39  Identities=28%  Similarity=0.556  Sum_probs=19.1

Q ss_pred             HHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         450 MQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       450 ~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      +++|++ +||.|++|++.|.....|..|+++|++.+ |.|+
T Consensus         4 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            4 GSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             SSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            344444 45555555555555555555555554443 3443

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.1e-08  Score=65.53  Aligned_cols=40  Identities=33%  Similarity=0.593  Sum_probs=21.8

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            4444544 45566666666655555555555555544 4443

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=4.1e-08  Score=64.93  Aligned_cols=39  Identities=26%  Similarity=0.525  Sum_probs=21.1

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP   43 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCST
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            3444544 45555555555555555555555555544 444

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.48  E-value=3.9e-08  Score=64.27  Aligned_cols=39  Identities=33%  Similarity=0.560  Sum_probs=23.9

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++++ |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            4555555 56666666666666666666666666554 444

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.48  E-value=2.4e-08  Score=64.53  Aligned_cols=39  Identities=18%  Similarity=0.236  Sum_probs=22.2

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-cccc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKC  568 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  568 (591)
                      |+++|++++ |+|++|+++|.++..|..|+++|++. ||+|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            344555544 45666666666666666666666553 5554

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=4.3e-08  Score=64.83  Aligned_cols=40  Identities=33%  Similarity=0.516  Sum_probs=24.6

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4555555 56666666666666666666666666554 4554

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.47  E-value=3.4e-08  Score=63.80  Aligned_cols=35  Identities=40%  Similarity=0.762  Sum_probs=32.5

Q ss_pred             HhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         557 HMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       557 H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |+++|++. ||.|++||++|.+.+.|..|+++|+|+
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   37 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGS   37 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCC
Confidence            78889875 899999999999999999999999975

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.46  E-value=4e-08  Score=64.25  Aligned_cols=36  Identities=33%  Similarity=0.533  Sum_probs=17.9

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~   39 (44)
T 2en7_A            3 SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGES   39 (44)
T ss_dssp             SCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSS
T ss_pred             CCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCC
Confidence            3444444 44555555555555555555555554443

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=4.3e-08  Score=63.34  Aligned_cols=35  Identities=26%  Similarity=0.613  Sum_probs=32.2

Q ss_pred             HhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         557 HMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       557 H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |+++|++. ||.|++||++|.+.+.|..|+++|+|+
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   37 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGS   37 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCC
Confidence            67888875 899999999999999999999999875

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=3.9e-08  Score=64.99  Aligned_cols=40  Identities=30%  Similarity=0.502  Sum_probs=26.4

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCC-CC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQG-IK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~-~~-~~C~  488 (591)
                      |+++|.+ +||.|+.|++.|.....|..|+++|++ .+ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4556655 667777777777777777777777766 44 5664

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=5.2e-08  Score=63.69  Aligned_cols=39  Identities=21%  Similarity=0.438  Sum_probs=24.9

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSS   43 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCC
Confidence            4555655 56777777777777777777766666654 454

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.45  E-value=1.8e-08  Score=65.17  Aligned_cols=39  Identities=26%  Similarity=0.392  Sum_probs=19.5

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-cccc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKC  568 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  568 (591)
                      |+++|++++ |+|++|+++|.+...|..|+++|++. ||+|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            344444444 35555555555555555555555443 4544

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=4.8e-08  Score=64.56  Aligned_cols=40  Identities=33%  Similarity=0.563  Sum_probs=23.1

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++.+ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4455554 55666666666666666666666665544 4553

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.44  E-value=4e-08  Score=64.94  Aligned_cols=40  Identities=33%  Similarity=0.556  Sum_probs=22.3

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|.+ +||.|++|++.|.....|..|+++|++++ |.|+
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4445554 55666666666666666666666655544 4543

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.43  E-value=4.9e-08  Score=63.81  Aligned_cols=39  Identities=28%  Similarity=0.391  Sum_probs=23.7

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-cccc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKC  568 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  568 (591)
                      |+++|++++ |.|++|++.|.+...|..|+++|++. ||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            455666555 46666666666666666666666653 5554

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=7.1e-08  Score=63.72  Aligned_cols=40  Identities=20%  Similarity=0.334  Sum_probs=29.7

Q ss_pred             HHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         531 MKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       531 ~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      +++|++++ |+|++|++.|.+...|..|+++|++. ||+|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            34566665 67888888888888888888888765 788764

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=98.43  E-value=6.3e-08  Score=62.53  Aligned_cols=36  Identities=22%  Similarity=0.421  Sum_probs=23.3

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      |+++|++ +||.|+.|++.|...+.|..|+++|++++
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   38 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSG   38 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCC
Confidence            3445555 56777777777777777777776666654

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.43  E-value=5.3e-08  Score=63.64  Aligned_cols=39  Identities=21%  Similarity=0.402  Sum_probs=22.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      |+++|.+ +||.|+.|++.|.....|..|+++|++++ |.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            4455554 55666666666666666666666665544 444

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=5.7e-08  Score=64.19  Aligned_cols=38  Identities=32%  Similarity=0.628  Sum_probs=19.2

Q ss_pred             HHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         450 MQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       450 ~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      +++|++ +||.|++|++.|.....|..|+++|++++ |.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2enh_A            4 GSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP   43 (46)
T ss_dssp             CCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCC
T ss_pred             CCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            334444 45555555555555555555555555443 344

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.42  E-value=2.1e-08  Score=66.39  Aligned_cols=40  Identities=23%  Similarity=0.299  Sum_probs=24.1

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      |+++|++++ |.|++|++.|.+...|..|+++|++. ||+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            455565554 46666666666666666666666543 56664

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.42  E-value=9.9e-08  Score=61.93  Aligned_cols=38  Identities=18%  Similarity=0.144  Sum_probs=28.0

Q ss_pred             hhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         533 LHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       533 ~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      +|++++ |+|+.|++.|.+...|..|+++|++. ||.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            466655 57888888888888888888887765 787764

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=2.2e-08  Score=65.51  Aligned_cols=39  Identities=26%  Similarity=0.353  Sum_probs=22.6

Q ss_pred             HHHhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-cccc
Q psy8499         530 HMKLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKC  568 (591)
Q Consensus       530 H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  568 (591)
                      |+++|++++ |.|++|+++|.+...|..|+++|++. ||.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            455555554 45666666666666666666666553 5655

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=4.2e-08  Score=63.37  Aligned_cols=35  Identities=29%  Similarity=0.570  Sum_probs=32.2

Q ss_pred             HhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         557 HMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       557 H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |+++|++. ||.|++||++|.+.+.|..|+++|+|+
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   37 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGS   37 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCC
Confidence            67889875 899999999999999999999999875

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.41  E-value=4.9e-08  Score=65.21  Aligned_cols=41  Identities=24%  Similarity=0.301  Sum_probs=31.7

Q ss_pred             HHhhcCCC-CCCC--cchhhcCChhhHHHHhhhcCCc-ccccCcC
Q psy8499         531 MKLHLGIK-NKCD--LCSKEFSTKHTLTEHMKLHQGI-RYKCDLC  571 (591)
Q Consensus       531 ~~~h~~~~-~~C~--~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C  571 (591)
                      .++|++++ |+|.  .|++.|.....|..|+++|++. ||+|++|
T Consensus         4 ~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            4 GSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45677666 5787  7888888888888888888765 7888877

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=8.5e-08  Score=62.62  Aligned_cols=38  Identities=26%  Similarity=0.381  Sum_probs=20.1

Q ss_pred             HHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         450 MQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       450 ~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      +++|.+ +||.|++|++.|.....|..|+++|++++ |+|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            4 GSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             SCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            344444 45555555555555555555555555543 344

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.40  E-value=1.6e-08  Score=74.81  Aligned_cols=61  Identities=25%  Similarity=0.389  Sum_probs=30.2

Q ss_pred             HHHHHHHhCCCC-CCccccccccCChhhHHHHHHhhCC-cccccccccccccchhhHHHHHHhhCC
Q psy8499         419 LTEHMKLHLGIK-NKCNLCSKEFSCKSHLKEHMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       419 l~~H~~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~  482 (591)
                      |..|+++|.+.+ +.|+.|++.|. ...|..|+ .|.+ +||.|+.|++.|. ...|..|+++|.+
T Consensus         5 L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            5 SSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTT
T ss_pred             HHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccC
Confidence            444444444444 35555555552 55555555 4443 4555555555544 3555555555444

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.40  E-value=5.2e-08  Score=63.69  Aligned_cols=35  Identities=31%  Similarity=0.534  Sum_probs=22.4

Q ss_pred             HhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         557 HMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       557 H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |+++|++. ||.|++|++.|.+.+.|..|+++|+|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~   38 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGV   38 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCC
Confidence            55666654 566666666666666666666666653

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=5.8e-08  Score=64.14  Aligned_cols=40  Identities=20%  Similarity=0.382  Sum_probs=25.8

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++++ |.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5556655 56777777777777777777777766544 4553

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.38  E-value=6.4e-08  Score=63.23  Aligned_cols=39  Identities=31%  Similarity=0.504  Sum_probs=26.4

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCCC-CCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKC  487 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C  487 (591)
                      |+++|++ +||.|++|++.|.....|..|+++|++.+ |.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            5556665 66777777777777777777777776654 455

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.36  E-value=5.4e-08  Score=63.95  Aligned_cols=39  Identities=28%  Similarity=0.442  Sum_probs=28.0

Q ss_pred             HhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCc
Q psy8499         532 KLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDL  570 (591)
Q Consensus       532 ~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~  570 (591)
                      ++|++++ |+|++|++.|.+...|..|+++|++. ||.|++
T Consensus         5 ~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            4566665 57777888887777788887777764 677763

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.35  E-value=1e-07  Score=59.50  Aligned_cols=33  Identities=24%  Similarity=0.437  Sum_probs=25.5

Q ss_pred             hhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         559 KLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       559 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ++|++. ||.|++||++|.+.+.|..|+++|+|+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   35 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPE   35 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSS
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCC
Confidence            456654 788888888888888888888888764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.34  E-value=1.1e-07  Score=59.41  Aligned_cols=34  Identities=24%  Similarity=0.293  Sum_probs=28.3

Q ss_pred             hhhcCCc-ccccCcCccccccchhHHhH-hhhccCC
Q psy8499         558 MKLHQGI-RYKCDLCTKEFSRKGRLTEH-MKLHLGI  591 (591)
Q Consensus       558 ~~~h~~~-~~~C~~C~~~f~~~~~l~~H-~~~H~~~  591 (591)
                      |++|++. ||+|+.||++|.+++.|..| +++|+|+
T Consensus         1 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            3567764 89999999999999999999 8888875

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=2.2e-07  Score=61.28  Aligned_cols=37  Identities=27%  Similarity=0.508  Sum_probs=20.0

Q ss_pred             hhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         452 VHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       452 ~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      +|++ +||.|++|++.|.....|..|+++|++++ |+|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            3444 45555555555555555555555555544 4443

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.33  E-value=2.8e-07  Score=59.72  Aligned_cols=33  Identities=21%  Similarity=0.360  Sum_probs=18.6

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      +||.|+.|++.|...+.|..|+++|++++ |.|+
T Consensus         9 k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            9 GAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            45556666666665555666655555544 4543

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.33  E-value=1.7e-07  Score=58.33  Aligned_cols=28  Identities=32%  Similarity=0.592  Sum_probs=24.3

Q ss_pred             cccccCc--CccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCDL--CTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~~--C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +||+|++  |+++|.+++.|.+|+++|+|+
T Consensus         8 kp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            8 ILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4899986  999999999999999999885

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.32  E-value=1.4e-07  Score=62.85  Aligned_cols=40  Identities=25%  Similarity=0.498  Sum_probs=23.8

Q ss_pred             HhhCC-cccccc--cccccccchhhHHHHHHhhCCCC-CCCccC
Q psy8499         451 QVHQG-ITYKCN--LCSKEFYRKQNLTKHMKLHQGIK-KKCDLC  490 (591)
Q Consensus       451 ~~h~~-~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C  490 (591)
                      ++|++ +||.|+  .|++.|.....|..|+++|++++ |+|++|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34444 566665  56666666666666666666554 566555

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.30  E-value=1.6e-07  Score=61.60  Aligned_cols=37  Identities=32%  Similarity=0.641  Sum_probs=23.2

Q ss_pred             hhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCc
Q psy8499         452 VHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCD  488 (591)
Q Consensus       452 ~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~  488 (591)
                      +|++ +||.|++|++.|.....|..|+++|++++ |.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            4444 56666666666666666666666666654 4554

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.29  E-value=2.1e-07  Score=59.61  Aligned_cols=36  Identities=31%  Similarity=0.508  Sum_probs=21.8

Q ss_pred             hhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-cccc
Q psy8499         533 LHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKC  568 (591)
Q Consensus       533 ~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  568 (591)
                      +|++++ |+|++|++.|.....|..|+++|++. ||+|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            455544 46666666666666666666666654 5655

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.28  E-value=2.3e-07  Score=57.87  Aligned_cols=34  Identities=26%  Similarity=0.494  Sum_probs=21.8

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~  482 (591)
                      |+++|++ +||.|+.|++.|.....|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            4455555 566666666666666666666666654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.25  E-value=2e-08  Score=76.73  Aligned_cols=55  Identities=20%  Similarity=0.364  Sum_probs=37.9

Q ss_pred             HhhcCCC-CCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhccC
Q psy8499         532 KLHLGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       532 ~~h~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      ++|++++ |+|++|++.|.....|..|+++|++. ||+|..|.    ....|..|+++|.|
T Consensus        18 ~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           18 GPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             CSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             cccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            4566665 57777777777777777787777764 77776543    45566667777665

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.24  E-value=4.3e-07  Score=55.75  Aligned_cols=31  Identities=26%  Similarity=0.657  Sum_probs=24.5

Q ss_pred             cCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         561 HQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       561 h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |++. ||.|++||+.|.+.+.|..|+++|+|+
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            4553 788888888888888888888888774

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.24  E-value=3.8e-07  Score=55.96  Aligned_cols=31  Identities=35%  Similarity=0.647  Sum_probs=24.2

Q ss_pred             cCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         561 HQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       561 h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |++. ||.|++|+++|.+.+.|..|+++|+|+
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~   33 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGA   33 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCC
Confidence            4443 788888888888888888888888764

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=3.8e-07  Score=56.80  Aligned_cols=33  Identities=24%  Similarity=0.422  Sum_probs=27.5

Q ss_pred             hhcCCc-ccccCcCccccccc-hhHHhHhhhccCC
Q psy8499         559 KLHQGI-RYKCDLCTKEFSRK-GRLTEHMKLHLGI  591 (591)
Q Consensus       559 ~~h~~~-~~~C~~C~~~f~~~-~~l~~H~~~H~~~  591 (591)
                      ++|++. ||.|++|++.|.+. +.|..|+++|+|+
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            356654 89999999999998 9999999999875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.21  E-value=4.6e-07  Score=56.01  Aligned_cols=32  Identities=22%  Similarity=0.422  Sum_probs=26.3

Q ss_pred             hcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         560 LHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       560 ~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      .|++. ||+|++|++.|...+.|..|+++|+|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            45554 799999999999999999999998874

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.20  E-value=5.8e-07  Score=51.31  Aligned_cols=27  Identities=37%  Similarity=0.845  Sum_probs=22.2

Q ss_pred             ccccCcCccccccchhHHhHhhhccCC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ||.|++||++|.+++.|..|+++|+|+
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCCC
Confidence            588899999999988999999888874

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=6.3e-07  Score=57.32  Aligned_cols=33  Identities=39%  Similarity=0.721  Sum_probs=29.7

Q ss_pred             hhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         559 KLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       559 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ++|++. ||.|++|+++|.+.+.|..|+++|+|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~   36 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGS   36 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCC
Confidence            467765 899999999999999999999999975

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.18  E-value=6.3e-07  Score=55.77  Aligned_cols=33  Identities=21%  Similarity=0.476  Sum_probs=21.1

Q ss_pred             hhCC-cccccccccccccchhhHHHHHHhhCCCC
Q psy8499         452 VHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       452 ~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      +|++ +||.|+.|++.|.....|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCC
Confidence            4444 56667667766666666666666666543

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.15  E-value=6.9e-07  Score=55.18  Aligned_cols=32  Identities=28%  Similarity=0.415  Sum_probs=25.6

Q ss_pred             hcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         560 LHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       560 ~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      .|++. ||+|++|++.|.+.+.|..|+++|+|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            45554 788888888888888888888888874

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.14  E-value=7.6e-07  Score=54.98  Aligned_cols=32  Identities=28%  Similarity=0.452  Sum_probs=25.6

Q ss_pred             hcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         560 LHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       560 ~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +|++. ||.|++|++.|.....|..|+++|+|+
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            35554 788888888888888888888888874

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.14  E-value=7.8e-07  Score=53.71  Aligned_cols=25  Identities=32%  Similarity=0.643  Sum_probs=13.0

Q ss_pred             CCCCcchhhcCChhhHHHHhhhcCC
Q psy8499         539 NKCDLCSKEFSTKHTLTEHMKLHQG  563 (591)
Q Consensus       539 ~~C~~C~~~f~~~~~l~~H~~~h~~  563 (591)
                      +.|++||++|.+...|..|+++|++
T Consensus         3 ~~C~~C~k~F~~~~~L~~H~~~H~~   27 (33)
T 1rim_A            3 FACPECPKRFMRSDHLSKHITLHEL   27 (33)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTT
T ss_pred             ccCCCCCchhCCHHHHHHHHHHhCC
Confidence            3455555555555555555555544

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.12  E-value=1.3e-06  Score=54.27  Aligned_cols=28  Identities=32%  Similarity=0.580  Sum_probs=21.9

Q ss_pred             ccccccc--ccccccchhhHHHHHHhhCCC
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +||.|+.  |++.|..++.|..|+++|++.
T Consensus         8 kp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            8 ILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             CCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            6788875  888888888888888888764

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.12  E-value=1.1e-06  Score=51.01  Aligned_cols=28  Identities=36%  Similarity=0.674  Sum_probs=24.3

Q ss_pred             cccccCcCccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +||.|++||+.|.+.+.|..|+++|+|+
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3788999999999999999999999875

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.11  E-value=1.2e-06  Score=54.08  Aligned_cols=31  Identities=35%  Similarity=0.593  Sum_probs=24.6

Q ss_pred             cCC-cccccCcCccccccchhHHhHhhhccCC
Q psy8499         561 HQG-IRYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       561 h~~-~~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |++ .||.|++|++.|.++..|..|+++|+|+
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            444 3788888888888888888888888874

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.09  E-value=1.2e-06  Score=50.41  Aligned_cols=27  Identities=37%  Similarity=0.826  Sum_probs=23.4

Q ss_pred             cccccCcCccccccchhHHhHhhhccC
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      +||.|++||++|...+.|..|+++|+|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            478899999999999999999988876

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.08  E-value=1.8e-06  Score=52.81  Aligned_cols=29  Identities=31%  Similarity=0.613  Sum_probs=19.4

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      +||.|+.|++.|...+.|..|+++|++++
T Consensus         6 k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            6 SGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            56677777777777777777766666543

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.08  E-value=1.3e-06  Score=55.09  Aligned_cols=34  Identities=24%  Similarity=0.482  Sum_probs=20.6

Q ss_pred             cCCC-CCCCcchhhcCChhhHHHHhhhcCCc-cccc
Q psy8499         535 LGIK-NKCDLCSKEFSTKHTLTEHMKLHQGI-RYKC  568 (591)
Q Consensus       535 ~~~~-~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C  568 (591)
                      ++++ +.|++||+.|.+...|..|+++|++. ||.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3443 46666666666666666666666654 5543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.08  E-value=1.3e-06  Score=50.70  Aligned_cols=27  Identities=30%  Similarity=0.781  Sum_probs=22.2

Q ss_pred             ccccCcCccccccchhHHhHhhhccCC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ||.|++||++|...+.|..|+++|+|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            688888888888888888888888764

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.07  E-value=1.2e-06  Score=58.29  Aligned_cols=26  Identities=35%  Similarity=0.791  Sum_probs=15.4

Q ss_pred             ccccCcCccccccchhHHhHhh-hccC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMK-LHLG  590 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~-~H~~  590 (591)
                      ||.|++||++|.+...|..|++ +|+|
T Consensus         7 p~~C~~C~k~F~~~~~L~~H~~~~H~~   33 (48)
T 3iuf_A            7 PYACDICGKRYKNRPGLSYHYAHSHLA   33 (48)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHSSCC
T ss_pred             CEECCCcCcccCCHHHHHHHhhhhcCC
Confidence            5666666666666666666655 5554

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.06  E-value=2e-06  Score=52.58  Aligned_cols=28  Identities=29%  Similarity=0.691  Sum_probs=18.7

Q ss_pred             cccccccccccccchhhHHHHHHhhCCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +||.|+.|++.|...+.|..|+++|++.
T Consensus         6 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   33 (35)
T 1srk_A            6 RPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             SCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             cCeeCCCCCcccCCHHHHHHHHHHcCCC
Confidence            5666666666666666666666666654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.05  E-value=4.7e-07  Score=54.26  Aligned_cols=27  Identities=30%  Similarity=0.688  Sum_probs=22.0

Q ss_pred             ccccCcCccccccchhHHhHhhhccCC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ||.|++||++|.+.+.|..|+++|+|+
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~   28 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIV   28 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccC
Confidence            688888888888888888888888764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.03  E-value=1.7e-06  Score=53.36  Aligned_cols=28  Identities=29%  Similarity=0.648  Sum_probs=23.5

Q ss_pred             cccccCcCccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      .||.|++|++.|.....|..|+++|+|+
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            4788888888888888888888888874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.03  E-value=1.5e-06  Score=49.62  Aligned_cols=26  Identities=27%  Similarity=0.598  Sum_probs=22.4

Q ss_pred             cccccCcCccccccchhHHhHhhhcc
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~  589 (591)
                      +||.|++||++|.+.+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            47889999999999999999988875

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.02  E-value=1.5e-06  Score=53.98  Aligned_cols=33  Identities=24%  Similarity=0.450  Sum_probs=23.9

Q ss_pred             HhhCC-cccccccccccccchhhHHHH-HHhhCCC
Q psy8499         451 QVHQG-ITYKCNLCSKEFYRKQNLTKH-MKLHQGI  483 (591)
Q Consensus       451 ~~h~~-~~~~C~~C~~~f~~~~~L~~H-~~~h~~~  483 (591)
                      ++|++ +||.|+.|++.|..++.|..| +++|++.
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            34555 678888888888888888888 7777653

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.02  E-value=2e-06  Score=50.31  Aligned_cols=28  Identities=29%  Similarity=0.552  Sum_probs=23.3

Q ss_pred             cccccCcCccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +||.|+.||++|.....|..|+++|+|+
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            4788888888888888888888888874

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.01  E-value=5.6e-07  Score=59.58  Aligned_cols=38  Identities=24%  Similarity=0.392  Sum_probs=29.8

Q ss_pred             HHHHhhhcCCc-ccccC--cCccccccchhHHhHhhhccCC
Q psy8499         554 LTEHMKLHQGI-RYKCD--LCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       554 l~~H~~~h~~~-~~~C~--~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +..|+..|++. ||.|+  .||++|.+++.|..|+++|+|+
T Consensus         6 ~~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            6 SIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SGGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            34455667765 89995  6999999999999999999875

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.01  E-value=2.4e-06  Score=50.56  Aligned_cols=27  Identities=33%  Similarity=0.754  Sum_probs=22.8

Q ss_pred             ccccC--cCccccccchhHHhHhhhccCC
Q psy8499         565 RYKCD--LCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       565 ~~~C~--~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ||.|+  .||++|.+.+.|..|+++|+|+
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            68887  8888888888888888888874

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.00  E-value=2.1e-06  Score=48.91  Aligned_cols=26  Identities=23%  Similarity=0.554  Sum_probs=21.8

Q ss_pred             cccccCcCccccccchhHHhHhhhcc
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~  589 (591)
                      +||.|+.||++|.+.+.|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHcc
Confidence            47888888888888888888888874

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.00  E-value=2.2e-06  Score=53.23  Aligned_cols=32  Identities=25%  Similarity=0.590  Sum_probs=22.7

Q ss_pred             hhCC-cccccccccccccch-hhHHHHHHhhCCC
Q psy8499         452 VHQG-ITYKCNLCSKEFYRK-QNLTKHMKLHQGI  483 (591)
Q Consensus       452 ~h~~-~~~~C~~C~~~f~~~-~~L~~H~~~h~~~  483 (591)
                      +|.+ +||.|+.|++.|... +.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            3454 677777777777777 7777777777654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.99  E-value=2.3e-06  Score=49.62  Aligned_cols=27  Identities=37%  Similarity=0.805  Sum_probs=22.9

Q ss_pred             ccccCcCccccccchhHHhHhhhccCC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ||.|+.||++|...+.|..|+++|+|+
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            688888888888888888888888774

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.99  E-value=3.3e-06  Score=51.98  Aligned_cols=31  Identities=35%  Similarity=0.541  Sum_probs=21.9

Q ss_pred             hCC-cccccccccccccchhhHHHHHHhhCCC
Q psy8499         453 HQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       453 h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      |.+ +||.|+.|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            444 5777777777777777777777777664

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.98  E-value=2.4e-06  Score=52.68  Aligned_cols=28  Identities=25%  Similarity=0.731  Sum_probs=19.8

Q ss_pred             cccccccccccccchhhHHHHHHhhCCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +||.|++|++.|...+.|..|+++|+++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            8 LLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            5677777777777777777777776654

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=97.98  E-value=3.8e-06  Score=50.56  Aligned_cols=28  Identities=36%  Similarity=0.810  Sum_probs=15.7

Q ss_pred             ccccccccccccchhhHHHHHHhhCCCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      ||.|++||+.|...+.|..|+++|++++
T Consensus         2 p~~C~~C~k~F~~~~~L~~H~~~H~~~~   29 (33)
T 1rim_A            2 KFACPECPKRFMRSDHLSKHITLHELLG   29 (33)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTTTC
T ss_pred             cccCCCCCchhCCHHHHHHHHHHhCCCC
Confidence            4555555555555555555555555543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.22  E-value=9.3e-07  Score=51.46  Aligned_cols=27  Identities=30%  Similarity=0.687  Sum_probs=22.6

Q ss_pred             ccccCcCccccccchhHHhHhhhccCC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ||.|++||++|...+.|..|+++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            688888888888888888888888774

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.97  E-value=2e-06  Score=49.92  Aligned_cols=27  Identities=37%  Similarity=0.838  Sum_probs=23.1

Q ss_pred             ccccCcCccccccchhHHhHhhhccCC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ||.|++||++|.....|..|+++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            688888888888888888888888874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.97  E-value=4e-06  Score=49.98  Aligned_cols=28  Identities=39%  Similarity=0.618  Sum_probs=23.7

Q ss_pred             cccccC--cCccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCD--LCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~--~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +||.|+  .||++|.+.+.|..|+++|+|+
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            478888  7888888888888888888874

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.97  E-value=3.1e-06  Score=52.11  Aligned_cols=31  Identities=32%  Similarity=0.533  Sum_probs=21.7

Q ss_pred             hCC-cccccccccccccchhhHHHHHHhhCCC
Q psy8499         453 HQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       453 h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      |.+ +||.|++|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            444 5777777777777777777777777654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=97.96  E-value=2.9e-06  Score=53.39  Aligned_cols=26  Identities=35%  Similarity=0.795  Sum_probs=15.2

Q ss_pred             ccccCcCccccccchhHHhHhhhccC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      ||.|++||+.|.+.+.|..|+++|+|
T Consensus         6 ~~~C~~C~k~f~~~~~L~~H~~~H~~   31 (39)
T 1njq_A            6 SYTCSFCKREFRSAQALGGHMNVHRR   31 (39)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             ceECCCCCcccCCHHHHHHHHHHcCC
Confidence            55555555555555555555555554

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.95  E-value=3.3e-06  Score=49.35  Aligned_cols=27  Identities=22%  Similarity=0.497  Sum_probs=21.0

Q ss_pred             ccccCcCccccccchhHHhHhhhccCC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ||.|++||+.|...+.|..|+++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~   28 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSK   28 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccC
Confidence            677888888888888888888887764

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.95  E-value=4.9e-06  Score=51.16  Aligned_cols=28  Identities=36%  Similarity=0.592  Sum_probs=18.5

Q ss_pred             cccccccccccccchhhHHHHHHhhCCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         8 ~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            8 KTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             SSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            5666666666666666666666666654

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.93  E-value=4.7e-06  Score=48.73  Aligned_cols=27  Identities=41%  Similarity=0.906  Sum_probs=23.0

Q ss_pred             ccccCcCccccccchhHHhH-hhhccCC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEH-MKLHLGI  591 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H-~~~H~~~  591 (591)
                      ||.|+.||++|.+.+.|..| +++|+|+
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            68888999999988889999 7888874

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.92  E-value=3e-06  Score=52.61  Aligned_cols=31  Identities=23%  Similarity=0.547  Sum_probs=25.1

Q ss_pred             cCC-cccccCc--CccccccchhHHhHhhhccCC
Q psy8499         561 HQG-IRYKCDL--CTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       561 h~~-~~~~C~~--C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |++ +||.|++  ||++|.+++.|..|+++|+|+
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            444 4789985  999999999999999988875

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=97.92  E-value=6e-06  Score=47.76  Aligned_cols=27  Identities=26%  Similarity=0.810  Sum_probs=16.6

Q ss_pred             ccccccccccccchhhHHHHHHhhCCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            566666666666666666666666553

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.14  E-value=1.4e-06  Score=49.14  Aligned_cols=25  Identities=32%  Similarity=0.767  Sum_probs=20.7

Q ss_pred             ccccCcCccccccchhHHhHhhhcc
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~  589 (591)
                      ||.|++||++|.+.+.|..|+++|+
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            6888888888888888888888874

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.14  E-value=1.4e-06  Score=51.03  Aligned_cols=28  Identities=32%  Similarity=0.763  Sum_probs=23.0

Q ss_pred             cccccCcCccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +||.|+.||++|...+.|..|+++|+|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4788888888888888888888888764

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=97.91  E-value=6.5e-06  Score=50.64  Aligned_cols=28  Identities=29%  Similarity=0.681  Sum_probs=20.6

Q ss_pred             cccccccccccccchhhHHHHHHhhCCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +||.|+.|++.|.....|..|+++|+++
T Consensus         8 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            8 KIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            5777777777777777777777777664

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=97.90  E-value=4.7e-06  Score=48.29  Aligned_cols=27  Identities=37%  Similarity=0.773  Sum_probs=18.5

Q ss_pred             ccccccccccccchhhHHHHHHhhCCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      ||.|+.|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            566777777777777777777666654

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.90  E-value=8.3e-06  Score=57.76  Aligned_cols=37  Identities=22%  Similarity=0.295  Sum_probs=26.7

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCCCCCccCcc
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSK  492 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~  492 (591)
                      +||.|+.|++.|.....|..|+++|++....+.+++.
T Consensus        12 kpy~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~~   48 (66)
T 2epp_A           12 GILPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDL   48 (66)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCCC
T ss_pred             cCcCCCCCCCccCCHHHHHhhhhhhCCCccccccccC
Confidence            6777777777777777777777777776666555543

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.86  E-value=1.3e-07  Score=72.09  Aligned_cols=54  Identities=22%  Similarity=0.399  Sum_probs=28.4

Q ss_pred             hhCC-cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCC
Q psy8499         452 VHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQG  509 (591)
Q Consensus       452 ~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~  509 (591)
                      +|++ +||.|++|++.|.....|..|+++|++++ |+|..|.    ....|..|.++|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhccccc
Confidence            3444 55666666666666666666666665544 4554332    33344445555444

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=7.7e-06  Score=47.27  Aligned_cols=27  Identities=37%  Similarity=0.840  Sum_probs=19.2

Q ss_pred             ccccccccccccchhhHHHHHHhhCCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcCC
Confidence            567777777777777777777777654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.81  E-value=8.6e-06  Score=47.01  Aligned_cols=27  Identities=37%  Similarity=0.661  Sum_probs=16.8

Q ss_pred             ccccccccccccchhhHHHHHHhhCCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      ||.|+.|++.|.....|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            2 EHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            566666666666666666666666543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.81  E-value=1.3e-05  Score=56.72  Aligned_cols=36  Identities=22%  Similarity=0.363  Sum_probs=23.5

Q ss_pred             CCCCcchhhcCChhhHHHHhhhcCCcccccCcCccc
Q psy8499         539 NKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKE  574 (591)
Q Consensus       539 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~  574 (591)
                      |+|..|+++|..+..|..|+++|++....+.+++..
T Consensus        14 y~C~~CgK~F~~~s~L~~H~r~Htg~~~~~~~~~~~   49 (66)
T 2epp_A           14 LPCGLCGKVFTDANRLRQHEAQHGVTSLQLGYIDLP   49 (66)
T ss_dssp             CCCTTTCCCCSCHHHHHHHHHHHTTTSCCCCSCCCC
T ss_pred             cCCCCCCCccCCHHHHHhhhhhhCCCccccccccCC
Confidence            567777777777777777777776665555555543

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=97.81  E-value=7.2e-06  Score=46.52  Aligned_cols=24  Identities=42%  Similarity=1.056  Sum_probs=11.8

Q ss_pred             cccccccccccchhhHHHHHHhhC
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMKLHQ  481 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~~h~  481 (591)
                      |.|+.|++.|.....|..|+++|+
T Consensus         2 ~~C~~C~k~f~~~~~l~~H~~~h~   25 (27)
T 1znf_A            2 YKCGLCERSFVEKSALSRHQRVHK   25 (27)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             ccCCCCCCcCCCHHHHHHHHHHcC
Confidence            444555555554444555544444

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=97.80  E-value=9.6e-06  Score=47.84  Aligned_cols=27  Identities=33%  Similarity=0.810  Sum_probs=16.1

Q ss_pred             ccccc--cccccccchhhHHHHHHhhCCC
Q psy8499         457 TYKCN--LCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       457 ~~~C~--~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      ||.|+  .||+.|...+.|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            55665  5666666666666666666553

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=97.80  E-value=7.5e-06  Score=54.25  Aligned_cols=32  Identities=22%  Similarity=0.563  Sum_probs=20.4

Q ss_pred             hCC-cccccccccccccchhhHHHHHH-hhCCCC
Q psy8499         453 HQG-ITYKCNLCSKEFYRKQNLTKHMK-LHQGIK  484 (591)
Q Consensus       453 h~~-~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~  484 (591)
                      |++ +||.|++|++.|.....|..|++ +|+++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            444 56777777777777777777776 666543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.00  E-value=2.9e-06  Score=49.22  Aligned_cols=27  Identities=30%  Similarity=0.706  Sum_probs=17.6

Q ss_pred             ccccccccccccchhhHHHHHHhhCCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      ||.|+.|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            566666666666666666666666553

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.79  E-value=6.9e-06  Score=51.24  Aligned_cols=26  Identities=23%  Similarity=0.484  Sum_probs=16.9

Q ss_pred             ccccC--cCccccccchhHHhHhhhccC
Q psy8499         565 RYKCD--LCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       565 ~~~C~--~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      ||.|+  .||++|.+.+.|..|+++|+|
T Consensus         6 ~~~C~~~~C~k~f~~~~~L~~H~~~H~~   33 (38)
T 1bhi_A            6 PFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             CEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             ceECCCCCCCcccCCHHHHHHHHHHhCC
Confidence            56666  366666666666666666655

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.77  E-value=3.2e-06  Score=55.82  Aligned_cols=35  Identities=26%  Similarity=0.453  Sum_probs=25.1

Q ss_pred             HHHhhCC-cccccc--cccccccchhhHHHHHHhhCCC
Q psy8499         449 HMQVHQG-ITYKCN--LCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       449 H~~~h~~-~~~~C~--~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      |...|++ +||.|+  .|++.|...+.|..|+++|+++
T Consensus         9 ~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A            9 KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3445665 678885  5888888888888888877765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=97.77  E-value=1.5e-05  Score=46.39  Aligned_cols=29  Identities=28%  Similarity=0.547  Sum_probs=23.8

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCCC
Q psy8499         374 EITYKCDLCLKEYSNKIYLTEHLKLHQGI  402 (591)
Q Consensus       374 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  402 (591)
                      ++||.|+.|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            36788888888888888888888888765

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.76  E-value=7.7e-06  Score=46.50  Aligned_cols=25  Identities=28%  Similarity=0.614  Sum_probs=18.4

Q ss_pred             cccccccccccccchhhHHHHHHhh
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLH  480 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h  480 (591)
                      +||.|+.||+.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4677777777777777777777765

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.74  E-value=1.4e-05  Score=56.01  Aligned_cols=37  Identities=16%  Similarity=0.236  Sum_probs=27.5

Q ss_pred             hcCCC-CCCCc--chhhcCChhhHHHHh-hhcCCc-ccccCc
Q psy8499         534 HLGIK-NKCDL--CSKEFSTKHTLTEHM-KLHQGI-RYKCDL  570 (591)
Q Consensus       534 h~~~~-~~C~~--C~~~f~~~~~l~~H~-~~h~~~-~~~C~~  570 (591)
                      .+|++ |+|..  |+++|.....|..|+ ++|++. ||.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            35555 68865  888888888888887 578874 787753

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.73  E-value=1e-05  Score=46.74  Aligned_cols=26  Identities=35%  Similarity=0.834  Sum_probs=22.5

Q ss_pred             ccccC--cCccccccchhHHhHhhhccC
Q psy8499         565 RYKCD--LCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       565 ~~~C~--~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      ||.|+  .||++|...+.|..|+++|+|
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            68888  899999988889999888875

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=97.73  E-value=1.6e-05  Score=46.26  Aligned_cols=26  Identities=31%  Similarity=0.621  Sum_probs=14.2

Q ss_pred             ccccccccccccchhhHHHHHHhhCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~  482 (591)
                      ||.|+.|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHcc
Confidence            45555555555555555555555544

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=97.73  E-value=1.4e-05  Score=49.53  Aligned_cols=28  Identities=25%  Similarity=0.616  Sum_probs=20.5

Q ss_pred             ccccccc--ccccccchhhHHHHHHhhCCC
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +||.|++  |++.|...+.|..|+++|+++
T Consensus         7 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            7 KQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            6777774  777777777777777777664

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.72  E-value=1.9e-05  Score=44.75  Aligned_cols=27  Identities=30%  Similarity=0.613  Sum_probs=21.3

Q ss_pred             CccccccccccccCCHHHHHHHHHHhC
Q psy8499         374 EITYKCDLCLKEYSNKIYLTEHLKLHQ  400 (591)
Q Consensus       374 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  400 (591)
                      ++||.|+.|++.|.....|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            357888888888888888888887763

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.71  E-value=2e-05  Score=46.83  Aligned_cols=28  Identities=39%  Similarity=0.744  Sum_probs=17.1

Q ss_pred             cccccc--cccccccchhhHHHHHHhhCCC
Q psy8499         456 ITYKCN--LCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       456 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +||.|+  .|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            356666  5666666666666666666553

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=97.70  E-value=1.5e-05  Score=45.63  Aligned_cols=28  Identities=32%  Similarity=0.683  Sum_probs=21.6

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCC
Q psy8499         374 EITYKCDLCLKEYSNKIYLTEHLKLHQG  401 (591)
Q Consensus       374 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  401 (591)
                      ++||.|+.|++.|.....|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3578888888888888888888877653

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.88  E-value=5.1e-06  Score=46.73  Aligned_cols=24  Identities=33%  Similarity=0.847  Sum_probs=15.9

Q ss_pred             ccccccccccccchhhHHHHHHhh
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLH  480 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h  480 (591)
                      ||.|+.||+.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            566666666666666666666655

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=96.84  E-value=6.1e-06  Score=48.21  Aligned_cols=28  Identities=29%  Similarity=0.706  Sum_probs=17.9

Q ss_pred             cccccccccccccchhhHHHHHHhhCCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +||.|+.|++.|.....|..|+++|++.
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            3566666666666666666666666553

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=97.65  E-value=2.2e-06  Score=51.22  Aligned_cols=27  Identities=33%  Similarity=0.700  Sum_probs=15.6

Q ss_pred             ccccccccccccchhhHHHHHHhhCCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      ||.|+.|++.|...+.|..|+++|+++
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~   28 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIV   28 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSS
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccC
Confidence            455555666555555555555555554

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.64  E-value=2.8e-05  Score=54.42  Aligned_cols=31  Identities=16%  Similarity=0.356  Sum_probs=18.3

Q ss_pred             CCCCC-CCCc--chhcccCchhHHHHH-HhhcCCC
Q psy8499         508 QGIKK-KCDL--CSKEFSCKRSVTEHM-KLHLGIK  538 (591)
Q Consensus       508 ~~~~~-~C~~--C~~~f~~~~~l~~H~-~~h~~~~  538 (591)
                      ++++| +|+.  |+++|.....|..|+ ++|++++
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEK   57 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDL   57 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCC
Confidence            44555 5643  666666666666665 4566655

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.64  E-value=1.5e-05  Score=48.63  Aligned_cols=20  Identities=35%  Similarity=0.531  Sum_probs=12.1

Q ss_pred             CCCCcchhhcCChhhHHHHh
Q psy8499         539 NKCDLCSKEFSTKHTLTEHM  558 (591)
Q Consensus       539 ~~C~~C~~~f~~~~~l~~H~  558 (591)
                      |+|+.||++|.+++.|..|+
T Consensus         9 ~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            9 FMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CEETTTTEECSCHHHHHHHH
T ss_pred             eECCCCCCccCCHhHccCcC
Confidence            45666666666666666665

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.62  E-value=1.9e-05  Score=46.01  Aligned_cols=26  Identities=42%  Similarity=1.016  Sum_probs=14.5

Q ss_pred             ccccccccccccchhhHHHH-HHhhCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKH-MKLHQG  482 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H-~~~h~~  482 (591)
                      ||.|+.|++.|...+.|..| +++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccC
Confidence            45555555555555555555 455544

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=97.61  E-value=2.7e-05  Score=48.43  Aligned_cols=29  Identities=21%  Similarity=0.445  Sum_probs=19.8

Q ss_pred             cccccc--cccccccchhhHHHHHHhhCCCC
Q psy8499         456 ITYKCN--LCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       456 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      +||.|+  .|++.|...+.|..|+++|++.+
T Consensus         5 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   35 (38)
T 1bhi_A            5 KPFLCTAPGCGQRFTNEDHLAVHKHKHEMTL   35 (38)
T ss_dssp             CCEECCCTTTCCEESSHHHHHHHHHHHHTTT
T ss_pred             cceECCCCCCCcccCCHHHHHHHHHHhCCCC
Confidence            567777  47777777777777777776643

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=97.51  E-value=3.9e-05  Score=46.78  Aligned_cols=31  Identities=26%  Similarity=0.510  Sum_probs=23.2

Q ss_pred             cCCccccccccccccCChhhHHHHHHhhCCCccccCc
Q psy8499         102 CQDIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDL  138 (591)
Q Consensus       102 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~  138 (591)
                      .++++|.|+.|++.|...+.|..|+      +|.|..
T Consensus         4 ~gekp~~C~~CgK~F~~~s~L~~H~------py~C~~   34 (36)
T 1fv5_A            4 LKPARFMCLPCGIAFSSPSTLEAHQ------AYYCSH   34 (36)
T ss_dssp             SSCCCCEETTTTEECSCHHHHHHHH------HHTSTT
T ss_pred             CCccCeECCCCCCccCCHhHccCcC------CeECcC
Confidence            4566788888888888888888887      566653

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.47  E-value=4.9e-05  Score=43.69  Aligned_cols=25  Identities=32%  Similarity=0.862  Sum_probs=17.0

Q ss_pred             ccccc--cccccccchhhHHHHHHhhC
Q psy8499         457 TYKCN--LCSKEFYRKQNLTKHMKLHQ  481 (591)
Q Consensus       457 ~~~C~--~C~~~f~~~~~L~~H~~~h~  481 (591)
                      ||.|+  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            56666  67777777777777766665

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.59  E-value=0.0023  Score=44.85  Aligned_cols=44  Identities=20%  Similarity=0.314  Sum_probs=23.4

Q ss_pred             cccccCChhhHHHHHH-hhCC-c------ccccc--cccccccchhhHHHHHHh
Q psy8499         436 CSKEFSCKSHLKEHMQ-VHQG-I------TYKCN--LCSKEFYRKQNLTKHMKL  479 (591)
Q Consensus       436 C~~~f~~~~~l~~H~~-~h~~-~------~~~C~--~C~~~f~~~~~L~~H~~~  479 (591)
                      |++.|.+...|..|+. .|.+ .      +|.|.  .|++.+.....|..|++.
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~   62 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINA   62 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccc
Confidence            5555555555555542 3433 1      45554  565555555555555554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=96.59  E-value=0.0014  Score=45.98  Aligned_cols=46  Identities=20%  Similarity=0.351  Sum_probs=28.9

Q ss_pred             chhhcCChhhHHHHh-hhcCCc-------ccccC--cCccccccchhHHhHhhhcc
Q psy8499         544 CSKEFSTKHTLTEHM-KLHQGI-------RYKCD--LCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       544 C~~~f~~~~~l~~H~-~~h~~~-------~~~C~--~C~~~f~~~~~l~~H~~~H~  589 (591)
                      |++.|.+...|..|+ +.|.+.       +|.|.  -|++.+.....|..|+++.|
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            556666666666665 345321       47775  67777777777777777643

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=95.65  E-value=0.032  Score=48.09  Aligned_cols=72  Identities=18%  Similarity=0.295  Sum_probs=31.6

Q ss_pred             ccccccCChhhHHHHHHhhCCcccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhhCC
Q psy8499         435 LCSKEFSCKSHLKEHMQVHQGITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLHQG  509 (591)
Q Consensus       435 ~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h~~  509 (591)
                      -|+..+. ...|..|...-.-.+..|+.|+..+ .+..|..|+...-..+ ..|+.|+..+. ...|..|..++.|
T Consensus        89 GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~~~~  161 (170)
T 3hcs_A           89 GCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQNCPL  161 (170)
T ss_dssp             TCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTTCCC
T ss_pred             CCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHhCcC
Confidence            3444332 3344555433233445555555554 3444555554333222 24555554442 2344555544444

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.04  E-value=0.011  Score=37.01  Aligned_cols=22  Identities=32%  Similarity=0.552  Sum_probs=10.7

Q ss_pred             ccccCcCccccccchhHHhHhh
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~  586 (591)
                      +|.|+-|+..|.....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4444455555544444444443

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=94.20  E-value=0.012  Score=46.68  Aligned_cols=27  Identities=22%  Similarity=0.410  Sum_probs=18.8

Q ss_pred             cCCc-ccccCcCccccccchhHHhHhhh
Q psy8499         561 HQGI-RYKCDLCTKEFSRKGRLTEHMKL  587 (591)
Q Consensus       561 h~~~-~~~C~~C~~~f~~~~~l~~H~~~  587 (591)
                      |+|. ||.|..|++.|.+.+.|..|+++
T Consensus        45 ~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           45 LPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             CCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            4443 67777777777777777777665

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.15  E-value=0.038  Score=44.78  Aligned_cols=20  Identities=25%  Similarity=0.567  Sum_probs=14.2

Q ss_pred             CCccccccccCChhhHHHHH
Q psy8499         431 NKCNLCSKEFSCKSHLKEHM  450 (591)
Q Consensus       431 ~~C~~C~~~f~~~~~l~~H~  450 (591)
                      +.|.+|+..|.+.+.+..|.
T Consensus        33 ~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           33 TQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             SEETTTTEECCSHHHHHHHH
T ss_pred             CcCcCCCCEeCCHHHHHHHH
Confidence            45777777777777777776

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.02  E-value=0.058  Score=43.69  Aligned_cols=20  Identities=30%  Similarity=0.526  Sum_probs=15.6

Q ss_pred             CcccccccccCChhHHHHHH
Q psy8499         161 NKCVLCSKEFSSKSYLTEHM  180 (591)
Q Consensus       161 ~~C~~C~~~f~~~~~l~~H~  180 (591)
                      +.|.+|+..|.+.+.+..|.
T Consensus        33 ~~C~~C~v~~~S~s~~~~H~   52 (127)
T 1zu1_A           33 TQCKVCSAVLISESQKLAHY   52 (127)
T ss_dssp             SEETTTTEECCSHHHHHHHH
T ss_pred             CcCcCCCCEeCCHHHHHHHH
Confidence            56888888888777777777

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=93.73  E-value=0.048  Score=34.18  Aligned_cols=23  Identities=30%  Similarity=0.603  Sum_probs=13.3

Q ss_pred             CCCCccCccccCChhhHHHHHhh
Q psy8499         484 KKKCDLCSKEFSTKCSLTEHMKL  506 (591)
Q Consensus       484 ~~~C~~C~~~f~~~~~L~~H~~~  506 (591)
                      ++.|+.|+..|.....|+.||+.
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhhh
Confidence            35566666666666666666553

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.05  E-value=0.038  Score=47.64  Aligned_cols=79  Identities=18%  Similarity=0.312  Sum_probs=43.8

Q ss_pred             ccccc--ccccccccchhhHHHHHHhhCCCCCCCccCccccCChhhHHHHHhhhCCCCC-CCCcchhcccCchhHHHHHH
Q psy8499         456 ITYKC--NLCSKEFYRKQNLTKHMKLHQGIKKKCDLCSKEFSTKCSLTEHMKLHQGIKK-KCDLCSKEFSCKRSVTEHMK  532 (591)
Q Consensus       456 ~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~-~C~~C~~~f~~~~~l~~H~~  532 (591)
                      ....|  .-|+..+. ...|..|...-.-....|+.|+..+ .+..|..|+...-..+. .|+.|+..+.. ..|..|..
T Consensus        81 l~v~C~n~GC~~~~~-~~~l~~H~~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~H~~  157 (170)
T 3hcs_A           81 LMVKCPNEGCLHKME-LRHLEDHQAHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEIHDQ  157 (170)
T ss_dssp             SEEECCSTTCCCEEE-GGGHHHHHTTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHHHHT
T ss_pred             cccCCCCCCCCceec-HhHHHHHHhcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHhHHH
Confidence            34556  35666544 4566677532222223577777766 55667777754444444 67777665543 45666666


Q ss_pred             hhcCC
Q psy8499         533 LHLGI  537 (591)
Q Consensus       533 ~h~~~  537 (591)
                      ++.|.
T Consensus       158 ~~~~~  162 (170)
T 3hcs_A          158 NCPLA  162 (170)
T ss_dssp             TCCC-
T ss_pred             hCcCh
Confidence            66554

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=92.82  E-value=0.024  Score=45.02  Aligned_cols=28  Identities=25%  Similarity=0.459  Sum_probs=22.1

Q ss_pred             hhCC-cccccccccccccchhhHHHHHHh
Q psy8499         452 VHQG-ITYKCNLCSKEFYRKQNLTKHMKL  479 (591)
Q Consensus       452 ~h~~-~~~~C~~C~~~f~~~~~L~~H~~~  479 (591)
                      .|+| .||.|..|++.|.+...|..|+++
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTC
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhh
Confidence            3555 688888888888888888888654

>1v65_A Riken cDNA 2610044O15; transcriptional repressor, heterochromatin, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.212.1.1

Probab=91.71  E-value=0.024  Score=39.37  Aligned_cols=34  Identities=9%  Similarity=-0.004  Sum_probs=29.1

Q ss_pred             cccccccccccccCcchhh-hhhhccccCCCcccc
Q psy8499          43 NESDRINIEENDWNDAVTR-DCLEFFKSCPKVEVK   76 (591)
Q Consensus        43 ~~~~~~~~~~~~~q~~l~~-vmle~~~~~~s~~~~   76 (591)
                      +++.++|..++++|+.+|+ +|++||.++.+++..
T Consensus        16 ~fs~eew~~l~~~qk~ly~~v~le~~~~l~slg~~   50 (64)
T 1v65_A           16 NFTEEEWDLLDSSQKRLYEEVMLETYQNLTDIGYN   50 (64)
T ss_dssp             CCCHHHHHTSCHHHHHHHHHHHHHTTTSCCCSCCC
T ss_pred             ecCHHHHhCCCHHHhhheeehhhhhhcceeecccc
Confidence            3566789999999999999 999999999888743

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=82.64  E-value=2  Score=27.78  Aligned_cols=45  Identities=22%  Similarity=0.446  Sum_probs=23.9

Q ss_pred             CCccCccccCChhhHHHHHhhhCCCCCCCCcchh-cccCchhHHHHHH
Q psy8499         486 KCDLCSKEFSTKCSLTEHMKLHQGIKKKCDLCSK-EFSCKRSVTEHMK  532 (591)
Q Consensus       486 ~C~~C~~~f~~~~~L~~H~~~h~~~~~~C~~C~~-~f~~~~~l~~H~~  532 (591)
                      .|++|.....+...|..|...--..  +|++|-. .-++.++|+.|.+
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g--qCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING--QCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT--BCTTTCCBCCSSHHHHHHHHT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC--CCCcccCcCCcCHHHHHHHHH
Confidence            4566666666666666665543222  4666533 2344555555543

>1v65_A Riken cDNA 2610044O15; transcriptional repressor, heterochromatin, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.212.1.1

Probab=81.51  E-value=0.5  Score=32.28  Aligned_cols=24  Identities=13%  Similarity=0.086  Sum_probs=19.3

Q ss_pred             CccccccccccCCCCCCCCCcccc
Q psy8499           2 ELNVEESKDHVGLSPPFYDPSRVI   25 (591)
Q Consensus         2 ~~~~e~~~~~~~~~~~~~~p~~~~   25 (591)
                      |||+||+.+++++|.+...|+.+.
T Consensus        35 ~v~le~~~~l~slg~~~~~~~~~~   58 (64)
T 1v65_A           35 EVMLETYQNLTDIGYNWQDHHIEE   58 (64)
T ss_dssp             HHHHHTTTSCCCSCCCCCCCCCCC
T ss_pred             ehhhhhhcceeeccccccCCcccc
Confidence            789999999999998766665543

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=81.15  E-value=1.2  Score=26.06  Aligned_cols=25  Identities=20%  Similarity=0.420  Sum_probs=18.2

Q ss_pred             cccccccccccCCHHHHHHHHHHhC
Q psy8499         376 TYKCDLCLKEYSNKIYLTEHLKLHQ  400 (591)
Q Consensus       376 ~~~C~~C~~~f~~~~~l~~H~~~h~  400 (591)
                      .|.|++|.+.|.+...|..|....+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            3778888888888888888865544

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=81.02  E-value=1.5  Score=25.66  Aligned_cols=25  Identities=24%  Similarity=0.469  Sum_probs=18.1

Q ss_pred             eeecccCccccCCHHHHHHHHHHhc
Q psy8499         295 TYKCDLCSKEFYRKQNLTKHMKVHQ  319 (591)
Q Consensus       295 ~~~C~~C~~~f~~~~~L~~H~~~h~  319 (591)
                      .|.|++|.+.|.+...|..|....+
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            4778888888888888888765443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	591
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	3e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.002
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.003
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.004
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.004
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.004
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	0.004

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (85), Expect = 2e-04
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 274 CSKEFSCKSHLKEHM-QVHQGITYKCDLCSKEFYRKQNLTKHMKVH 318
           C K F+ KS    HM        Y C +C K+F  K +L  HMK+H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 3e-04
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 1/46 (2%)

Query: 436 CSKEFSCKSHLKEHM-QVHQGITYKCNLCSKEFYRKQNLTKHMKLH 480
           C K F+ KS    HM        Y C +C K+F  K +L  HMK+H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.2 bits (83), Expect = 6e-04
 Identities = 20/51 (39%), Positives = 26/51 (50%), Gaps = 2/51 (3%)

Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQG-MKNKCVLCSKEFSSKSYLTEHMKLH 345
           Y C  C K F  K    +HM +H G     C +C K+F  K +L  HMK+H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (82), Expect = 6e-04
 Identities = 20/46 (43%), Positives = 25/46 (54%), Gaps = 1/46 (2%)

Query: 166 CSKEFSSKSYLTEHMKRHQG-IKYKCNLCSKEFSSKSYLTEHMKLH 210
           C K F+ KS    HM  H G   Y C +C K+F  K +L  HMK+H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 9e-04
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 134 YKCDLCSKEFSCKRYLTEHMKVHQG-MKNKCVLCSKEFSSKSYLTEHMKRH 183
           Y C  C K F+ K     HM +H G     C +C K+F  K +L  HMK H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 247 CSKEFSRKRRLTEHMKLHLG-IKNKCNLCSKEFSCKSHLKEHMQVH 291
           C K F+ K +   HM +HLG     C +C K+F  K HL  HM++H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (80), Expect = 0.001
 Identities = 19/46 (41%), Positives = 26/46 (56%), Gaps = 1/46 (2%)

Query: 409 CSKEFSRKRRLTEHMKLHLG-IKNKCNLCSKEFSCKSHLKEHMQVH 453
           C K F+ K +   HM +HLG     C +C K+F  K HL  HM++H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 0.002
 Identities = 20/51 (39%), Positives = 25/51 (49%), Gaps = 2/51 (3%)

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQG-IKKKCDLCSKEFSTKCSLTEHMKLH 507
           Y C  C K F  K    +HM +H G     C +C K+F  K  L  HMK+H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.002
 Identities = 20/51 (39%), Positives = 28/51 (54%), Gaps = 2/51 (3%)

Query: 107 YKCDLCSKEYSYKHTLTEHMKLHQG-IRYKCDLCSKEFSCKRYLTEHMKVH 156
           Y C  C K +++K     HM +H G   Y C +C K+F  K +L  HMK+H
Sbjct: 4   YPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 0.003
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 296 YKCDLCSKEFYRKQNLTKHMKVHQG 320
           Y C  C K F R   L +H +VH G
Sbjct: 8   YGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.004
 Identities = 13/29 (44%), Positives = 16/29 (55%), Gaps = 1/29 (3%)

Query: 183 HQGIK-YKCNLCSKEFSSKSYLTEHMKLH 210
           H G K Y C  C K FS  S L +H ++H
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVH 30

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.004
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 270 KCNLCSKEFSCKSHLKEHMQVHQG 293
            C  C K FS  S L +H +VH G
Sbjct: 9   GCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.004
 Identities = 11/24 (45%), Positives = 13/24 (54%)

Query: 432 KCNLCSKEFSCKSHLKEHMQVHQG 455
            C  C K FS  S L +H +VH G
Sbjct: 9   GCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.004
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 458 YKCNLCSKEFYRKQNLTKHMKLHQG 482
           Y C  C K F R   L +H ++H G
Sbjct: 8   YGCVECGKAFSRSSILVQHQRVHTG 32

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	591
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.45
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.42
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.13
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.07
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.05
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.98
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.97
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.97
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.96
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	98.91
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.88
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.86
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.85
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.82
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.82
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.78
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.78
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	98.77
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.77
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.75
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.74
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.73
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.72
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	98.7
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.68
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.63
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.62
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.61
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.56
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.53
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.52
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.5
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.47
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.42
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.41
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.4
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.39
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.31
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.26
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.19
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.18
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.15
d1v65a_	64	hypotheical protein 2610044O15Rik {Mouse (Mus musc	98.13
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.1
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.02
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.86
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.82
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.75
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.7
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.7
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.63
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.63
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.54
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.52
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.46
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.45
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.4
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.36
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.3
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.3
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.26
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.24
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.18
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.11
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.09
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.04
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.02
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.91
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.91
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.61
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.59
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.57
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.54
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.44
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.43
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.37
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	96.36
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.32
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.24
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.01
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	95.99
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.87
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.85
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	95.76
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.64
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.4
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.39
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.34
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.33
d1v65a_	64	hypotheical protein 2610044O15Rik {Mouse (Mus musc	95.26
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.15
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	94.87
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.49
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	94.16
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.98
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	93.96
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.68
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	93.29
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	92.57
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	92.27
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.22
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	91.64
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	91.54
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	91.29
d1y0jb1	36	U-shaped transcription factor, different fingers {	90.11
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	87.84
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	86.55
d1y0jb1	36	U-shaped transcription factor, different fingers {	86.23
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	86.1
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	82.64
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	81.85
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	80.76
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	80.62

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.5e-14  Score=97.21  Aligned_cols=50  Identities=40%  Similarity=0.848  Sum_probs=45.4

Q ss_pred             CCCCCcchhhcCChhhHHHHhhhcCCc-ccccCcCccccccchhHHhHhhhc
Q psy8499         538 KNKCDLCSKEFSTKHTLTEHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLH  588 (591)
Q Consensus       538 ~~~C~~C~~~f~~~~~l~~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H  588 (591)
                      +|+|+ ||++|..+.+|..|+++|+|+ ||.|++||++|.+.+.|..|+++|
T Consensus         3 ~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           3 LYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            36895 999999999999999999986 899999999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3.5e-14  Score=95.35  Aligned_cols=51  Identities=39%  Similarity=0.859  Sum_probs=33.9

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC-CCCccCccccCChhhHHHHHhhh
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK-KKCDLCSKEFSTKCSLTEHMKLH  507 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~-~~C~~C~~~f~~~~~L~~H~~~h  507 (591)
                      +||.|+ ||++|..+.+|..|+++|+|++ |.|++||++|.+.+.|..|+++|
T Consensus         2 K~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           2 KLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             cCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            466663 6666666666666666666665 46666666666666666666655

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.13  E-value=5.7e-12  Score=76.51  Aligned_cols=36  Identities=36%  Similarity=0.616  Sum_probs=32.6

Q ss_pred             HHhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         556 EHMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       556 ~H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +|+++|+++ ||.|++||++|.++++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            478889886 899999999999999999999999997

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=1.6e-11  Score=73.91  Aligned_cols=35  Identities=31%  Similarity=0.611  Sum_probs=31.8

Q ss_pred             HhhhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         557 HMKLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       557 H~~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |.|+|+|+ ||+|++||++|.++++|.+|+++|.++
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~v   37 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcCC
Confidence            67899986 999999999999999999999999875

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=2.8e-11  Score=69.98  Aligned_cols=32  Identities=41%  Similarity=0.770  Sum_probs=29.0

Q ss_pred             hcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         560 LHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       560 ~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +|+|+ ||+|..||++|.++++|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            57775 899999999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.98  E-value=7.5e-11  Score=66.10  Aligned_cols=28  Identities=29%  Similarity=0.725  Sum_probs=25.4

Q ss_pred             cccccCcCccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +||+|++||++|++++.|.+|+++|+||
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgE   28 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCC
Confidence            4899999999999999999999999986

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.97  E-value=6.1e-11  Score=65.50  Aligned_cols=28  Identities=36%  Similarity=0.873  Sum_probs=25.8

Q ss_pred             CcccccCcCccccccchhHHhHhhhccC
Q psy8499         563 GIRYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       563 ~~~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      ++||+|++||++|.++++|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3689999999999999999999999987

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.97  E-value=9e-11  Score=69.98  Aligned_cols=33  Identities=33%  Similarity=0.554  Sum_probs=25.9

Q ss_pred             hhcCCc-ccccCcCccccccchhHHhHhhhccCC
Q psy8499         559 KLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       559 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |+|+|+ ||+|++||++|.+++.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            567775 788888888888888888888888764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.96  E-value=1.2e-10  Score=65.10  Aligned_cols=28  Identities=32%  Similarity=0.707  Sum_probs=25.6

Q ss_pred             cccccCcCccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +||.|++||++|.++++|.+|+++|+|+
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htge   28 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNK   28 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCc
Confidence            4899999999999999999999999986

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.91  E-value=8.3e-11  Score=71.26  Aligned_cols=35  Identities=31%  Similarity=0.597  Sum_probs=25.0

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      |+++|++ +||.|++||++|...++|..|+++|+|+
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5666666 6777777777777777777777777763

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=4.1e-10  Score=67.05  Aligned_cols=35  Identities=34%  Similarity=0.571  Sum_probs=27.2

Q ss_pred             HhhCC-cccccccccccccchhhHHHHHHhhCCCCC
Q psy8499         451 QVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGIKK  485 (591)
Q Consensus       451 ~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~  485 (591)
                      ++|+| +||+|++||++|..++.|..|+++|++..|
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~f   36 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNF   36 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCCC
Confidence            46777 788888888888888888888888877653

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=5.2e-10  Score=64.54  Aligned_cols=32  Identities=38%  Similarity=0.775  Sum_probs=24.8

Q ss_pred             hhCC-cccccccccccccchhhHHHHHHhhCCC
Q psy8499         452 VHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       452 ~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +|++ +||.|+.||++|..++.|..|+++|+|+
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            4666 7888888888888888888888888764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.85  E-value=4.8e-10  Score=65.66  Aligned_cols=30  Identities=27%  Similarity=0.686  Sum_probs=25.0

Q ss_pred             cCCc-ccccCcCccccccchhHHhHhhhccC
Q psy8499         561 HQGI-RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       561 h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      |+|+ ||+|++|+++|.++++|.+|+++|++
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            4564 88888888888888888888888876

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.82  E-value=7.9e-10  Score=61.87  Aligned_cols=29  Identities=28%  Similarity=0.763  Sum_probs=20.8

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      +||.|++||++|...+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46777777777777777777777777653

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=4.7e-10  Score=66.63  Aligned_cols=32  Identities=25%  Similarity=0.647  Sum_probs=25.9

Q ss_pred             hhcCCc-ccccCcCccccccchhHHhHhhhccC
Q psy8499         559 KLHQGI-RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       559 ~~h~~~-~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      |+|+|+ ||+|++||++|.++++|+.|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            568875 89999999999999999999766554

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.4e-09  Score=60.69  Aligned_cols=29  Identities=41%  Similarity=0.793  Sum_probs=20.4

Q ss_pred             cccccccccccccchhhHHHHHHhhCCCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      +||.|++||++|..++.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46777777777777777777777777653

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.7e-09  Score=65.11  Aligned_cols=33  Identities=36%  Similarity=0.797  Sum_probs=21.2

Q ss_pred             cccccccccccccchhhHHHHHH-hhCCCC-CCCc
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMK-LHQGIK-KKCD  488 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~-~h~~~~-~~C~  488 (591)
                      +||+|+.||+.|...++|..|++ +|+|++ |+|+
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            56666666666666666666654 566655 4665

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.77  E-value=9.1e-10  Score=66.06  Aligned_cols=34  Identities=26%  Similarity=0.494  Sum_probs=24.5

Q ss_pred             HHHhhCC-cccccccccccccchhhHHHHHHhhCC
Q psy8499         449 HMQVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       449 H~~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~  482 (591)
                      |.++|+| +||+|+.|+++|..+++|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            4566776 677777777777777777777777753

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.2e-09  Score=61.34  Aligned_cols=28  Identities=36%  Similarity=0.686  Sum_probs=25.5

Q ss_pred             cccccCc--CccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCDL--CTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~~--C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +||+|++  ||++|.++++|++|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4899988  999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.75  E-value=1.6e-09  Score=65.22  Aligned_cols=34  Identities=32%  Similarity=0.609  Sum_probs=26.8

Q ss_pred             CCCCCCcchhhcCChhhHHHHhh-hcCCc-ccccCc
Q psy8499         537 IKNKCDLCSKEFSTKHTLTEHMK-LHQGI-RYKCDL  570 (591)
Q Consensus       537 ~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~C~~  570 (591)
                      .+|+|++||++|.....|..||+ +|+|+ ||+|++
T Consensus         4 Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           4 KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            34688888888888888888875 68875 888875

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.74  E-value=1e-09  Score=58.74  Aligned_cols=26  Identities=38%  Similarity=0.727  Sum_probs=23.6

Q ss_pred             cccccCcCccccccchhHHhHhhhcc
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~  589 (591)
                      +||+|+.||++|.+++.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            48999999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.73  E-value=1.2e-09  Score=61.49  Aligned_cols=28  Identities=32%  Similarity=0.691  Sum_probs=25.8

Q ss_pred             cccccCc--CccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCDL--CTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~~--C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +||.|++  ||++|.++++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4899988  999999999999999999996

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.72  E-value=4.4e-10  Score=71.27  Aligned_cols=39  Identities=26%  Similarity=0.523  Sum_probs=32.4

Q ss_pred             hhHHHHhhhcCCc-ccccCc--CccccccchhHHhHhhhccCC
Q psy8499         552 HTLTEHMKLHQGI-RYKCDL--CTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       552 ~~l~~H~~~h~~~-~~~C~~--C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ..|..|++ |+|. ||+|++  ||++|.++++|..|+++|+|+
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            45666775 7665 899987  999999999999999999986

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.70  E-value=3.2e-09  Score=62.06  Aligned_cols=31  Identities=29%  Similarity=0.695  Sum_probs=23.4

Q ss_pred             hCC-cccccccccccccchhhHHHHHHhhCCC
Q psy8499         453 HQG-ITYKCNLCSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       453 h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      |+| +||+|++|++.|.++++|.+|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            445 7888888888888888888888887753

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.68  E-value=3.4e-09  Score=58.37  Aligned_cols=28  Identities=29%  Similarity=0.822  Sum_probs=25.1

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCC
Q psy8499         374 EITYKCDLCLKEYSNKIYLTEHLKLHQG  401 (591)
Q Consensus       374 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  401 (591)
                      |+||+|++|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5799999999999999999999999876

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.63  E-value=4.8e-09  Score=56.08  Aligned_cols=26  Identities=35%  Similarity=0.750  Sum_probs=21.2

Q ss_pred             cccccccccccccchhhHHHHHHhhC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQ  481 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~  481 (591)
                      +||+|+.||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            47888888888888888888888874

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.62  E-value=7e-09  Score=58.84  Aligned_cols=28  Identities=32%  Similarity=0.699  Sum_probs=24.3

Q ss_pred             cccccC--cCccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCD--LCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~--~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +||.|+  .||++|.+.++|.+|+++|+|+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htge   30 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCccccc
Confidence            478996  4999999999999999999986

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.61  E-value=7.6e-09  Score=61.30  Aligned_cols=32  Identities=22%  Similarity=0.612  Sum_probs=23.3

Q ss_pred             HhhCC-cccccccccccccchhhHHHHHHhhCC
Q psy8499         451 QVHQG-ITYKCNLCSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       451 ~~h~~-~~~~C~~C~~~f~~~~~L~~H~~~h~~  482 (591)
                      ++|+| +||.|++|++.|..+++|..|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            35677 778888888888888888888665544

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.56  E-value=1.4e-08  Score=51.01  Aligned_cols=26  Identities=50%  Similarity=0.940  Sum_probs=20.4

Q ss_pred             ccccCcCccccccchhHHhHhhhccC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      |.+|++||+.|+++..|+.||+.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45788888888888888888888876

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.53  E-value=9.7e-09  Score=56.96  Aligned_cols=27  Identities=41%  Similarity=0.958  Sum_probs=24.8

Q ss_pred             cccccCc--CccccccchhHHhHhhhccC
Q psy8499         564 IRYKCDL--CTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       564 ~~~~C~~--C~~~f~~~~~l~~H~~~H~~  590 (591)
                      +||+|++  ||++|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4899988  99999999999999999987

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.52  E-value=4.5e-09  Score=66.50  Aligned_cols=40  Identities=23%  Similarity=0.542  Sum_probs=28.8

Q ss_pred             hhHHHHHHhhCC-ccccccc--ccccccchhhHHHHHHhhCCCC
Q psy8499         444 SHLKEHMQVHQG-ITYKCNL--CSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       444 ~~l~~H~~~h~~-~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      ..|..|+. |++ +||.|++  |++.|...++|..|+++|+|++
T Consensus         5 ~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           5 GSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             chhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            34455654 555 7888876  8888888888888888888764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.50  E-value=2.7e-08  Score=55.70  Aligned_cols=28  Identities=36%  Similarity=0.744  Sum_probs=18.9

Q ss_pred             ccccccc--ccccccchhhHHHHHHhhCCC
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +||.|++  |+++|.+.+.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            3667766  777777777777777777663

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=2.6e-08  Score=55.90  Aligned_cols=28  Identities=32%  Similarity=0.768  Sum_probs=21.9

Q ss_pred             ccccccc--ccccccchhhHHHHHHhhCCC
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +||.|++  ||++|...++|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            4788876  888888888888888888764

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=4.9e-08  Score=55.27  Aligned_cols=29  Identities=34%  Similarity=0.763  Sum_probs=19.5

Q ss_pred             cccccc--cccccccchhhHHHHHHhhCCCC
Q psy8499         456 ITYKCN--LCSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       456 ~~~~C~--~C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      +||.|+  .|+++|...++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            367774  47777777777777777777653

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.41  E-value=2.4e-08  Score=58.88  Aligned_cols=30  Identities=47%  Similarity=0.923  Sum_probs=21.6

Q ss_pred             CCCc--chhhcCChhhHHHHhhhcCCc-ccccC
Q psy8499         540 KCDL--CSKEFSTKHTLTEHMKLHQGI-RYKCD  569 (591)
Q Consensus       540 ~C~~--C~~~f~~~~~l~~H~~~h~~~-~~~C~  569 (591)
                      .|+.  ||++|.++..|++|+++|+|+ ||+|+
T Consensus         3 ~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           3 SCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             ECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             ECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            4554  777777777777777777765 67775

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.40  E-value=3.8e-08  Score=53.80  Aligned_cols=26  Identities=31%  Similarity=0.706  Sum_probs=23.1

Q ss_pred             cccccCc--CccccccchhHHhHhhhcc
Q psy8499         564 IRYKCDL--CTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       564 ~~~~C~~--C~~~f~~~~~l~~H~~~H~  589 (591)
                      +||.|+.  ||++|.+.++|++|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4799988  9999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.39  E-value=8.5e-08  Score=54.51  Aligned_cols=27  Identities=41%  Similarity=0.698  Sum_probs=24.1

Q ss_pred             cccccCc--CccccccchhHHhHhhhccC
Q psy8499         564 IRYKCDL--CTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       564 ~~~~C~~--C~~~f~~~~~l~~H~~~H~~  590 (591)
                      +||.|++  ||++|++.++|.+|+++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            5899988  99999999999999999975

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=1.3e-07  Score=55.64  Aligned_cols=22  Identities=45%  Similarity=0.830  Sum_probs=9.7

Q ss_pred             ccccccchhhHHHHHHhhCCCC
Q psy8499         463 CSKEFYRKQNLTKHMKLHQGIK  484 (591)
Q Consensus       463 C~~~f~~~~~L~~H~~~h~~~~  484 (591)
                      ||+.|.+++.|++|+++|+|++
T Consensus         9 C~k~F~~~~~L~~H~r~Htgek   30 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTR   30 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSC
T ss_pred             CCCeeCChhHhccccCeeCCCC
Confidence            4444444444444444444443

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.26  E-value=1.2e-07  Score=52.54  Aligned_cols=27  Identities=37%  Similarity=0.990  Sum_probs=20.8

Q ss_pred             ccccccc--ccccccchhhHHHHHHhhCC
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  482 (591)
                      +||.|++  |+++|.+.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            4778866  88888888888888887765

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.19  E-value=3.5e-07  Score=47.63  Aligned_cols=26  Identities=35%  Similarity=0.873  Sum_probs=24.3

Q ss_pred             cccccCcCccccccchhHHhHhhhcc
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~  589 (591)
                      +||.|++||+.|.++...++|.++|.
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            58999999999999999999999986

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=2.9e-07  Score=50.23  Aligned_cols=26  Identities=35%  Similarity=0.750  Sum_probs=18.8

Q ss_pred             ccccccc--ccccccchhhHHHHHHhhC
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHMKLHQ  481 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~~~h~  481 (591)
                      +||.|+.  ||++|.+.++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            4677766  7777777777777777764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.15  E-value=6.2e-07  Score=44.92  Aligned_cols=24  Identities=50%  Similarity=1.000  Sum_probs=16.7

Q ss_pred             CCCcchhhcCChhhHHHHhhhcCC
Q psy8499         540 KCDLCSKEFSTKHTLTEHMKLHQG  563 (591)
Q Consensus       540 ~C~~C~~~f~~~~~l~~H~~~h~~  563 (591)
                      +|++|++.|+.+..|..|||.|+|
T Consensus         3 kc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           3 KCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             ccchhhhHhcchhHHHHHhhccCC
Confidence            567777777777777777776664

>d1v65a_ a.212.1.1 (A:) hypotheical protein 2610044O15Rik {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: KRAB domain (Kruppel-associated box)
superfamily: KRAB domain (Kruppel-associated box)
family: KRAB domain (Kruppel-associated box)
domain: hypotheical protein 2610044O15Rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.13  E-value=1.2e-07  Score=62.96  Aligned_cols=36  Identities=8%  Similarity=-0.047  Sum_probs=32.9

Q ss_pred             ccccccccccccccCcchhh-hhhhccccCCCccccc
Q psy8499          42 SNESDRINIEENDWNDAVTR-DCLEFFKSCPKVEVKS   77 (591)
Q Consensus        42 ~~~~~~~~~~~~~~q~~l~~-vmle~~~~~~s~~~~~   77 (591)
                      ..+++++|..|+++|++||+ ||+|||.++.++|..+
T Consensus        15 V~Fs~EEW~~Ld~~Qk~LyrdVm~Eny~~l~slg~~~   51 (64)
T d1v65a_          15 MNFTEEEWDLLDSSQKRLYEEVMLETYQNLTDIGYNW   51 (64)
T ss_dssp             TCCCHHHHHTSCHHHHHHHHHHHHHTTTSCCCSCCCC
T ss_pred             EEcCHHHHhCcCHHHHHHHHHhHHHHhhhhheeccCc
Confidence            35788999999999999999 9999999999999754

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.10  E-value=8.1e-07  Score=50.38  Aligned_cols=27  Identities=41%  Similarity=0.828  Sum_probs=19.8

Q ss_pred             ccccccc--ccccccchhhHHHHHHhhCC
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  482 (591)
                      +||.|++  |+++|.+.++|.+|+++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            5777766  77777777777777777764

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.02  E-value=1.1e-06  Score=45.00  Aligned_cols=26  Identities=31%  Similarity=0.584  Sum_probs=23.3

Q ss_pred             cccCcCccccccchhHHhHhhhccCC
Q psy8499         566 YKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       566 ~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ..|..||++|...+.|++|+.+|+|+
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccCC
Confidence            46899999999999999999999986

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=2.3e-06  Score=45.07  Aligned_cols=27  Identities=37%  Similarity=0.795  Sum_probs=22.1

Q ss_pred             cccccCcCccccccchhHHhHhhhccC
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      +||.|++|+..|.++..+.-|++.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            578888888888888888888888866

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.82  E-value=3.8e-06  Score=43.69  Aligned_cols=26  Identities=27%  Similarity=0.805  Sum_probs=22.1

Q ss_pred             cccccccccccccchhhHHHHHHhhC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQ  481 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~  481 (591)
                      +||.|++||+.|.......+|.++|-
T Consensus         2 kPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           2 KPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCcccchhhhhhhcchhhhhhhhhcc
Confidence            68888889988888888888888874

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=5e-06  Score=43.97  Aligned_cols=27  Identities=37%  Similarity=0.738  Sum_probs=24.1

Q ss_pred             cccccCc--CccccccchhHHhHhhhccC
Q psy8499         564 IRYKCDL--CTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       564 ~~~~C~~--C~~~f~~~~~l~~H~~~H~~  590 (591)
                      +||.|.+  |+++++..++|+.|++++||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4788988  99999999999999999886

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=8.9e-06  Score=41.80  Aligned_cols=28  Identities=29%  Similarity=0.602  Sum_probs=23.0

Q ss_pred             cccccCcCccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      .||+|.+|.++-...+.|..|++.|+|.
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CcceeeecccccCCchheEEeeecccCc
Confidence            4788888888888888888888888874

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.70  E-value=1.6e-05  Score=41.88  Aligned_cols=29  Identities=28%  Similarity=0.602  Sum_probs=25.4

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCCC
Q psy8499         374 EITYKCDLCLKEYSNKIYLTEHLKLHQGI  402 (591)
Q Consensus       374 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  402 (591)
                      ++||.|++|+..|..+..+..|.++|.|.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            57899999999999999999999998774

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=1.2e-05  Score=41.28  Aligned_cols=29  Identities=38%  Similarity=0.623  Sum_probs=25.8

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCCC
Q psy8499         374 EITYKCDLCLKEYSNKIYLTEHLKLHQGI  402 (591)
Q Consensus       374 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  402 (591)
                      ++||+|..|...-.+.+.|..|++.|+|.
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            57999999999999999999999999873

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.63  E-value=2.3e-05  Score=40.60  Aligned_cols=25  Identities=20%  Similarity=0.464  Sum_probs=11.4

Q ss_pred             CCCccCccccCChhhHHHHHhhhCC
Q psy8499         485 KKCDLCSKEFSTKCSLTEHMKLHQG  509 (591)
Q Consensus       485 ~~C~~C~~~f~~~~~L~~H~~~h~~  509 (591)
                      |.|++||......+-|+.|+++|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccccCcccCCHHHHHHHHHHhcC
Confidence            3444444444444444444444444

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=2.1e-05  Score=40.75  Aligned_cols=27  Identities=22%  Similarity=0.620  Sum_probs=19.5

Q ss_pred             ccccCcCccccccchhHHhHhhhccCC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +|.|+.||..-...+.|+.|+++|+|+
T Consensus         1 kYvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           1 KYICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             CccccccCcccCCHHHHHHHHHHhcCC
Confidence            366777777777777777777777764

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.52  E-value=2.5e-05  Score=38.55  Aligned_cols=24  Identities=42%  Similarity=0.966  Sum_probs=17.4

Q ss_pred             cccCcCccccccchhHHhHhhhcc
Q psy8499         566 YKCDLCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       566 ~~C~~C~~~f~~~~~l~~H~~~H~  589 (591)
                      |+|.+|.++|..++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            567777777777777777777764

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.46  E-value=2.8e-05  Score=40.09  Aligned_cols=28  Identities=32%  Similarity=0.654  Sum_probs=24.5

Q ss_pred             cccccCcCccccccchhHHhHhhhccCC
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      .-|.|.+|...|.++-.|+.||..|+|+
T Consensus         3 qvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           3 QVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             ceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            3588999999999999999999999886

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.45  E-value=4.9e-05  Score=38.17  Aligned_cols=25  Identities=36%  Similarity=0.668  Sum_probs=13.8

Q ss_pred             CCccCccccCChhhHHHHHhhhCCC
Q psy8499         486 KCDLCSKEFSTKCSLTEHMKLHQGI  510 (591)
Q Consensus       486 ~C~~C~~~f~~~~~L~~H~~~h~~~  510 (591)
                      +|+.|.++|.++.-|+.|-|.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            3555555555555555555555554

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.40  E-value=3.2e-05  Score=38.88  Aligned_cols=24  Identities=38%  Similarity=0.589  Sum_probs=12.3

Q ss_pred             cCcCccccccchhHHhHhhhccCC
Q psy8499         568 CDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       568 C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      |+.|.++|.++.-|+.|.+.|+|+
T Consensus         3 cp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           3 CPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             CcchHHHHHHhHhhhhccccccCC
Confidence            555555555555555555555543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.36  E-value=4.7e-05  Score=40.19  Aligned_cols=27  Identities=37%  Similarity=0.774  Sum_probs=19.4

Q ss_pred             ccccccc--ccccccchhhHHHHHHhhCC
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~  482 (591)
                      +||.|.+  |++++...+.|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4677765  77777777777777776654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=3.8e-05  Score=39.71  Aligned_cols=23  Identities=48%  Similarity=0.927  Sum_probs=21.2

Q ss_pred             ccccCcCccccccchhHHhHhhh
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKL  587 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~  587 (591)
                      ||.|..|+.+|.++++|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            78999999999999999999976

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=5e-05  Score=38.65  Aligned_cols=26  Identities=27%  Similarity=0.652  Sum_probs=20.1

Q ss_pred             cccccCcCccccccchhHHhHhhhcc
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~  589 (591)
                      +||+|..|+++-...++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            47778888888888888888887775

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=6.4e-05  Score=40.55  Aligned_cols=27  Identities=33%  Similarity=0.635  Sum_probs=18.6

Q ss_pred             CCccCccccCChhhHHHHHhhhCCCCC
Q psy8499         486 KCDLCSKEFSTKCSLTEHMKLHQGIKK  512 (591)
Q Consensus       486 ~C~~C~~~f~~~~~L~~H~~~h~~~~~  512 (591)
                      .|+.||+.|.....|.+|...|++++|
T Consensus         7 ~ce~cgk~frdvyhlnrhklshs~ekp   33 (35)
T d2epra1           7 ACEICGKIFRDVYHLNRHKLSHSGEKP   33 (35)
T ss_dssp             EETTTTEEESSHHHHHHHGGGSCSCCC
T ss_pred             hHHHHHHHHHHHHHHHhhhcccCCCCC
Confidence            467777777777777777777776654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.24  E-value=5.8e-05  Score=40.19  Aligned_cols=26  Identities=42%  Similarity=0.974  Sum_probs=21.4

Q ss_pred             ccccCcCccccccchhHHhHh-hhccC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHM-KLHLG  590 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~-~~H~~  590 (591)
                      ||.|.+|++.|.++..|.+|. +.|.|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcC
Confidence            789999999999999999995 44554

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.18  E-value=0.0001  Score=37.45  Aligned_cols=26  Identities=31%  Similarity=0.699  Sum_probs=19.2

Q ss_pred             cccccccccccccchhhHHHHHHhhC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQ  481 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~  481 (591)
                      +||+|..|++.-...+.|.+|+|+|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            46777777777777777777777765

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.11  E-value=9.5e-05  Score=39.86  Aligned_cols=26  Identities=31%  Similarity=0.525  Sum_probs=19.9

Q ss_pred             cccCcCccccccchhHHhHhhhccCC
Q psy8499         566 YKCDLCTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       566 ~~C~~C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ..|++||+.|.....|.+|...|.|+
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~e   31 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGE   31 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCC
Confidence            45778888888888888887777765

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=0.00015  Score=37.06  Aligned_cols=23  Identities=35%  Similarity=0.746  Sum_probs=10.5

Q ss_pred             CccCccccCChhhHHHHHhhhCC
Q psy8499         487 CDLCSKEFSTKCSLTEHMKLHQG  509 (591)
Q Consensus       487 C~~C~~~f~~~~~L~~H~~~h~~  509 (591)
                      |..||+.|...+.|++|...|+|
T Consensus         5 c~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           5 CAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             CTTTCCEESSHHHHHHHGGGTSC
T ss_pred             HHHHhHHHHHHHHHHHHhhcccC
Confidence            44444444444444444444443

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.04  E-value=0.00014  Score=35.86  Aligned_cols=19  Identities=37%  Similarity=0.978  Sum_probs=7.3

Q ss_pred             cccccccccchhhHHHHHH
Q psy8499         460 CNLCSKEFYRKQNLTKHMK  478 (591)
Q Consensus       460 C~~C~~~f~~~~~L~~H~~  478 (591)
                      |..|.++|..++.|.+|++
T Consensus         3 cglcersfveksalsrhqr   21 (26)
T d1znfa_           3 CGLCERSFVEKSALSRHQR   21 (26)
T ss_dssp             CSSSCCBCSSHHHHHHHGG
T ss_pred             ccchHHHHHHHHHHHHHHH
Confidence            3333333333333333333

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.02  E-value=0.0001  Score=37.98  Aligned_cols=25  Identities=44%  Similarity=0.878  Sum_probs=21.8

Q ss_pred             cccccCc--CccccccchhHHhHhhhc
Q psy8499         564 IRYKCDL--CTKEFSRKGRLTEHMKLH  588 (591)
Q Consensus       564 ~~~~C~~--C~~~f~~~~~l~~H~~~H  588 (591)
                      .||+|+.  |+++|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3788876  999999999999999887

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.91  E-value=0.00031  Score=36.27  Aligned_cols=24  Identities=50%  Similarity=0.872  Sum_probs=20.7

Q ss_pred             eeecccCccccCCHHHHHHHHHHh
Q psy8499         295 TYKCDLCSKEFYRKQNLTKHMKVH  318 (591)
Q Consensus       295 ~~~C~~C~~~f~~~~~L~~H~~~h  318 (591)
                      ||.|..|..+|.++.+|..||+.-
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            688999999999999999998753

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.91  E-value=0.00018  Score=37.16  Aligned_cols=27  Identities=33%  Similarity=0.602  Sum_probs=23.4

Q ss_pred             ccccCc--CccccccchhHHhHhhhccCC
Q psy8499         565 RYKCDL--CTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       565 ~~~C~~--C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      ||.|..  |++.|.+...|.+|..+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            677865  999999999999999999886

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.00043  Score=36.80  Aligned_cols=28  Identities=29%  Similarity=0.580  Sum_probs=23.5

Q ss_pred             cccccCc--CccccccchhHHhHh-hhccCC
Q psy8499         564 IRYKCDL--CTKEFSRKGRLTEHM-KLHLGI  591 (591)
Q Consensus       564 ~~~~C~~--C~~~f~~~~~l~~H~-~~H~~~  591 (591)
                      +||.|.+  |+++|+..++-..|+ ++|..+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            4788988  999999999999996 888654

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.59  E-value=0.00083  Score=34.53  Aligned_cols=25  Identities=40%  Similarity=0.834  Sum_probs=20.1

Q ss_pred             ceeeccc--CccccCCHHHHHHHHHHh
Q psy8499         294 ITYKCDL--CSKEFYRKQNLTKHMKVH  318 (591)
Q Consensus       294 ~~~~C~~--C~~~f~~~~~L~~H~~~h  318 (591)
                      .||+|+.  |++.|...+.|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3788875  888888888888888876

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.57  E-value=0.00059  Score=35.38  Aligned_cols=27  Identities=22%  Similarity=0.497  Sum_probs=22.2

Q ss_pred             cccccCcCccccccchhHHhHhhhccC
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      +||+|..|.+.-...++|+.|+++-|+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            478888888888888888888887554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.54  E-value=0.00074  Score=35.01  Aligned_cols=27  Identities=30%  Similarity=0.572  Sum_probs=18.1

Q ss_pred             cccccccccccccchhhHHHHHHhhCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  482 (591)
                      +||.|..|.+.....++|+.|+++-++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            367777777777777777777665443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.44  E-value=0.0014  Score=33.62  Aligned_cols=29  Identities=24%  Similarity=0.636  Sum_probs=20.4

Q ss_pred             CccccccccccccCCHHHHHHHHHHhCCC
Q psy8499         374 EITYKCDLCLKEYSNKIYLTEHLKLHQGI  402 (591)
Q Consensus       374 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  402 (591)
                      +..|.|..|...|..+..|+.|+..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            34567777777777777777777777663

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.43  E-value=0.00073  Score=34.99  Aligned_cols=27  Identities=44%  Similarity=0.775  Sum_probs=21.2

Q ss_pred             cccccccccccccchhhHHHHHHhhCC
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~~~h~~  482 (591)
                      +||+|+.|....++.++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            478888888888888888888776544

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.37  E-value=0.00049  Score=36.56  Aligned_cols=22  Identities=36%  Similarity=0.933  Sum_probs=16.7

Q ss_pred             ccccccccccccchhhHHHHHH
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMK  478 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~  478 (591)
                      ||.|.+|++.|..+.-|.+|..
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            6777888888887777777754

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=96.36  E-value=0.00098  Score=38.12  Aligned_cols=26  Identities=38%  Similarity=0.896  Sum_probs=16.1

Q ss_pred             ccccccccccccchhhHHHHHHhhCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~  482 (591)
                      .|.|.+|++.|.+..+|--||+.|..
T Consensus         5 ~~~C~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           5 SYTCSFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SEECTTTCCEESSHHHHHHHHHTTCC
T ss_pred             ccCCCCCCCccCCcccccchHhhhcc
Confidence            46666666666666666666666644

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.32  E-value=0.00066  Score=35.15  Aligned_cols=26  Identities=31%  Similarity=0.714  Sum_probs=22.4

Q ss_pred             ccccCcCccccccchhHHhHhhhccC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      ||+|+.|..-..+.++|..|++.-||
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CcccceecccccCcchHHHHHHHHcc
Confidence            78999999999999999999887555

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.00089  Score=35.56  Aligned_cols=27  Identities=33%  Similarity=0.664  Sum_probs=20.9

Q ss_pred             ccccccc--ccccccchhhHHHHH-HhhCC
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHM-KLHQG  482 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~-~~h~~  482 (591)
                      +||.|++  |.|.|...+...+|+ |+|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4788876  888888888888886 77654

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.01  E-value=0.0015  Score=37.32  Aligned_cols=22  Identities=32%  Similarity=0.954  Sum_probs=17.2

Q ss_pred             cccccccccccccchhhHHHHH
Q psy8499         456 ITYKCNLCSKEFYRKQNLTKHM  477 (591)
Q Consensus       456 ~~~~C~~C~~~f~~~~~L~~H~  477 (591)
                      +||.|..|+|.|-.+..+.+|.
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhh
Confidence            6788888888888888777775

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=95.99  E-value=0.0024  Score=36.45  Aligned_cols=28  Identities=25%  Similarity=0.646  Sum_probs=18.0

Q ss_pred             ccccccccccccCCHHHHHHHHHHhCCC
Q psy8499         375 ITYKCDLCLKEYSNKIYLTEHLKLHQGI  402 (591)
Q Consensus       375 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  402 (591)
                      +.|.|.+|++.|.+..+|--|++.|...
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCCCCCccCCcccccchHhhhcch
Confidence            3466666666666666666666666543

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.87  E-value=0.0023  Score=33.01  Aligned_cols=28  Identities=32%  Similarity=0.615  Sum_probs=19.9

Q ss_pred             ccccccc--ccccccchhhHHHHHHhhCCC
Q psy8499         456 ITYKCNL--CSKEFYRKQNLTKHMKLHQGI  483 (591)
Q Consensus       456 ~~~~C~~--C~~~f~~~~~L~~H~~~h~~~  483 (591)
                      +||.|..  |.+.|.+...|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            3677754  777787777777777777663

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.85  E-value=0.0016  Score=31.97  Aligned_cols=22  Identities=41%  Similarity=0.871  Sum_probs=19.3

Q ss_pred             ccccCcCccccccchhHHhHhh
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~  586 (591)
                      ||+|..|...|.++.+|..||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7889999999999999998875

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0021  Score=36.77  Aligned_cols=23  Identities=26%  Similarity=0.791  Sum_probs=19.1

Q ss_pred             cccccCcCccccccchhHHhHhh
Q psy8499         564 IRYKCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       564 ~~~~C~~C~~~f~~~~~l~~H~~  586 (591)
                      +||.|.+|++.|-.+.++.+|.-
T Consensus         4 KPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           4 KPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCEECSSSCCEESCHHHHHHHHH
T ss_pred             CceeccchhhhhhhHHHHHHhhh
Confidence            48889999999888888888853

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.64  E-value=0.004  Score=30.57  Aligned_cols=22  Identities=45%  Similarity=0.990  Sum_probs=18.0

Q ss_pred             eeecccCccccCCHHHHHHHHH
Q psy8499         295 TYKCDLCSKEFYRKQNLTKHMK  316 (591)
Q Consensus       295 ~~~C~~C~~~f~~~~~L~~H~~  316 (591)
                      ||+|..|...|..+..|..|+-
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            6888888888888888888864

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.40  E-value=0.0032  Score=32.04  Aligned_cols=23  Identities=39%  Similarity=0.642  Sum_probs=16.6

Q ss_pred             CCCcchhhcCChhhHHHHhhhcC
Q psy8499         540 KCDLCSKEFSTKHTLTEHMKLHQ  562 (591)
Q Consensus       540 ~C~~C~~~f~~~~~l~~H~~~h~  562 (591)
                      +|+.|+++.+++.+|+.|.|+|-
T Consensus         4 kc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGGC
T ss_pred             cCcccccccCcHHHHHHhhcccc
Confidence            57777777777777777777763

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.39  E-value=0.0026  Score=37.74  Aligned_cols=24  Identities=38%  Similarity=0.704  Sum_probs=19.7

Q ss_pred             ccccCcCccccccchhHHhHhhhc
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLH  588 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H  588 (591)
                      .|.|.+||+.|+....|++|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            578888888888888888887766

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.34  E-value=0.0038  Score=31.52  Aligned_cols=22  Identities=36%  Similarity=0.671  Sum_probs=19.4

Q ss_pred             ccccCcCccccccchhHHhHhh
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~  586 (591)
                      ||+|..||+.+.++.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            6899999999999999998854

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.33  E-value=0.0039  Score=31.46  Aligned_cols=22  Identities=36%  Similarity=0.880  Sum_probs=15.8

Q ss_pred             ccccccccccccchhhHHHHHH
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMK  478 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~  478 (591)
                      ||+|..||+.+..+.+|..|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5777777777777777777753

>d1v65a_ a.212.1.1 (A:) hypotheical protein 2610044O15Rik {Mouse (Mus musculus) [TaxId: 10090]}

class: All alpha proteins
fold: KRAB domain (Kruppel-associated box)
superfamily: KRAB domain (Kruppel-associated box)
family: KRAB domain (Kruppel-associated box)
domain: hypotheical protein 2610044O15Rik
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.26  E-value=0.002  Score=42.40  Aligned_cols=21  Identities=14%  Similarity=0.208  Sum_probs=18.2

Q ss_pred             CccccccccccCCCCCCCCCc
Q psy8499           2 ELNVEESKDHVGLSPPFYDPS   22 (591)
Q Consensus         2 ~~~~e~~~~~~~~~~~~~~p~   22 (591)
                      |||+|||.+++++|....+|.
T Consensus        35 dVm~Eny~~l~slg~~~~~~~   55 (64)
T d1v65a_          35 EVMLETYQNLTDIGYNWQDHH   55 (64)
T ss_dssp             HHHHHTTTSCCCSCCCCCCCC
T ss_pred             HhHHHHhhhhheeccCcCCCC
Confidence            899999999999998766654

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.15  E-value=0.0039  Score=30.76  Aligned_cols=22  Identities=50%  Similarity=1.087  Sum_probs=18.1

Q ss_pred             cccCcCccccccchhHHhHhhh
Q psy8499         566 YKCDLCTKEFSRKGRLTEHMKL  587 (591)
Q Consensus       566 ~~C~~C~~~f~~~~~l~~H~~~  587 (591)
                      |.|++|-+.|+++.++..|+++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888888776

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.87  E-value=0.007  Score=30.76  Aligned_cols=22  Identities=36%  Similarity=0.631  Sum_probs=10.2

Q ss_pred             ccccccccccchhhHHHHHHhh
Q psy8499         459 KCNLCSKEFYRKQNLTKHMKLH  480 (591)
Q Consensus       459 ~C~~C~~~f~~~~~L~~H~~~h  480 (591)
                      +|+.|.++..++..|+.|.|+|
T Consensus         4 kc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           4 KCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             ECSSSSCEESSHHHHHHHHGGG
T ss_pred             cCcccccccCcHHHHHHhhccc
Confidence            3444444444444444444444

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.49  E-value=0.0097  Score=29.30  Aligned_cols=22  Identities=55%  Similarity=1.082  Sum_probs=17.6

Q ss_pred             cccccccccccchhhHHHHHHh
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMKL  479 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~~  479 (591)
                      |.|+.|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6788888888888888888765

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.16  E-value=0.017  Score=32.58  Aligned_cols=27  Identities=22%  Similarity=0.464  Sum_probs=23.4

Q ss_pred             Cccccc--cccccccCCHHHHHHHHHHhC
Q psy8499         374 EITYKC--DLCLKEYSNKIYLTEHLKLHQ  400 (591)
Q Consensus       374 ~~~~~C--~~C~~~f~~~~~l~~H~~~h~  400 (591)
                      ++||.|  +-|+.+|.+...|..|...|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            789999  569999999999999988774

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.98  E-value=0.012  Score=31.78  Aligned_cols=26  Identities=27%  Similarity=0.680  Sum_probs=18.2

Q ss_pred             ccccCcCccccccchhHHhHhhhccC
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMKLHLG  590 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~~H~~  590 (591)
                      .|.|..||+.|.++..+.+|-..-+|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            37777777777777777777655444

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.96  E-value=0.011  Score=33.38  Aligned_cols=27  Identities=22%  Similarity=0.476  Sum_probs=22.6

Q ss_pred             Cccccc--CcCccccccchhHHhHhhhcc
Q psy8499         563 GIRYKC--DLCTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       563 ~~~~~C--~~C~~~f~~~~~l~~H~~~H~  589 (591)
                      .+||.|  +-|+.+|.+...|..|.+.|.
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhhe
Confidence            468999  559999999999999988774

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.68  E-value=0.016  Score=34.31  Aligned_cols=24  Identities=33%  Similarity=0.648  Sum_probs=17.2

Q ss_pred             ccccccccccccchhhHHHHHHhh
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLH  480 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h  480 (591)
                      .|.|..|||.|.....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            466777777777777777776666

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.29  E-value=0.022  Score=30.76  Aligned_cols=26  Identities=27%  Similarity=0.731  Sum_probs=19.4

Q ss_pred             ccccccccccccchhhHHHHHHhhCC
Q psy8499         457 TYKCNLCSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       457 ~~~C~~C~~~f~~~~~L~~H~~~h~~  482 (591)
                      .|.|..||+.|..+..+.+|...-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            47788888888888888888765544

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.57  E-value=0.024  Score=31.22  Aligned_cols=18  Identities=28%  Similarity=0.558  Sum_probs=7.9

Q ss_pred             hcccCchhHHHHHHhhcC
Q psy8499         519 KEFSCKRSVTEHMKLHLG  536 (591)
Q Consensus       519 ~~f~~~~~l~~H~~~h~~  536 (591)
                      +.|..+..|..|||+|+|
T Consensus        15 ~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          15 RPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CCCSSHHHHHHHTHHHHC
T ss_pred             CcchhHHHHHHHHhhcCC
Confidence            334444444444444443

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.27  E-value=0.045  Score=27.62  Aligned_cols=22  Identities=27%  Similarity=0.671  Sum_probs=13.6

Q ss_pred             cccccccccccchhhHHHHHHh
Q psy8499         458 YKCNLCSKEFYRKQNLTKHMKL  479 (591)
Q Consensus       458 ~~C~~C~~~f~~~~~L~~H~~~  479 (591)
                      |.|+.|+-....++.|+.|++.
T Consensus         3 ~qcphc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhhh
Confidence            5566666666666666666554

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.22  E-value=0.027  Score=29.49  Aligned_cols=27  Identities=30%  Similarity=0.765  Sum_probs=20.3

Q ss_pred             ccccCc--CccccccchhHHhHhhhccCC
Q psy8499         565 RYKCDL--CTKEFSRKGRLTEHMKLHLGI  591 (591)
Q Consensus       565 ~~~C~~--C~~~f~~~~~l~~H~~~H~~~  591 (591)
                      +|.|.+  |+.+|.....|..|+-.|+|+
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            466655  788888888888888888775

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=91.64  E-value=0.031  Score=27.98  Aligned_cols=19  Identities=32%  Similarity=0.569  Sum_probs=13.8

Q ss_pred             CccccccchhHHhHhhhcc
Q psy8499         571 CTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       571 C~~~f~~~~~l~~H~~~H~  589 (591)
                      ||++|..-..|+.|+-+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            7777777777777776665

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.54  E-value=0.1  Score=26.33  Aligned_cols=23  Identities=26%  Similarity=0.668  Sum_probs=16.2

Q ss_pred             eecccCccccCCHHHHHHHHHHh
Q psy8499         296 YKCDLCSKEFYRKQNLTKHMKVH  318 (591)
Q Consensus       296 ~~C~~C~~~f~~~~~L~~H~~~h  318 (591)
                      |+|+.|+-...+++.|+.|++.-
T Consensus         3 ~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHT
T ss_pred             ccCCcchhheeehhhhhHHhhhc
Confidence            66777777777777777776643

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.29  E-value=0.046  Score=30.11  Aligned_cols=20  Identities=30%  Similarity=0.504  Sum_probs=12.0

Q ss_pred             ccccCChhhHHHHHhhhCCC
Q psy8499         491 SKEFSTKCSLTEHMKLHQGI  510 (591)
Q Consensus       491 ~~~f~~~~~L~~H~~~h~~~  510 (591)
                      ++.|.....|..|||+|+|+
T Consensus        14 ~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          14 LRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TCCCSSHHHHHHHTHHHHCC
T ss_pred             CCcchhHHHHHHHHhhcCCC
Confidence            34566666666666666653

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=90.11  E-value=0.072  Score=28.43  Aligned_cols=22  Identities=32%  Similarity=0.591  Sum_probs=16.9

Q ss_pred             ccccCcCccccccchhHHhHhh
Q psy8499         565 RYKCDLCTKEFSRKGRLTEHMK  586 (591)
Q Consensus       565 ~~~C~~C~~~f~~~~~l~~H~~  586 (591)
                      +|-|.-||-.|+..+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            5778888888888888877764

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=87.84  E-value=0.16  Score=26.56  Aligned_cols=26  Identities=27%  Similarity=0.689  Sum_probs=17.1

Q ss_pred             ccccc--cccccccchhhHHHHHHhhCC
Q psy8499         457 TYKCN--LCSKEFYRKQNLTKHMKLHQG  482 (591)
Q Consensus       457 ~~~C~--~C~~~f~~~~~L~~H~~~h~~  482 (591)
                      .|.|.  .|+..|.....|..|+-.|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            45563  477777777777777766665

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.55  E-value=0.14  Score=26.04  Aligned_cols=18  Identities=33%  Similarity=0.744  Sum_probs=12.6

Q ss_pred             CccccccchhHHhHhhhc
Q psy8499         571 CTKEFSRKGRLTEHMKLH  588 (591)
Q Consensus       571 C~~~f~~~~~l~~H~~~H  588 (591)
                      |++.|+..+.++.|+-+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            667777777777776665

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=86.23  E-value=0.19  Score=26.76  Aligned_cols=21  Identities=33%  Similarity=0.618  Sum_probs=13.2

Q ss_pred             ccccCccccccCChhHHHHHH
Q psy8499         133 RYKCDLCSKEFSCKRYLTEHM  153 (591)
Q Consensus       133 ~~~C~~C~~~f~~~~~l~~H~  153 (591)
                      +|.|.-||-.|++.+.|..|+
T Consensus         8 rf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHT
T ss_pred             ceeccccceeecChhHHHhhh
Confidence            466666666666666666664

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.10  E-value=0.18  Score=25.56  Aligned_cols=18  Identities=33%  Similarity=0.735  Sum_probs=12.7

Q ss_pred             ccccccchhhHHHHHHhh
Q psy8499         463 CSKEFYRKQNLTKHMKLH  480 (591)
Q Consensus       463 C~~~f~~~~~L~~H~~~h  480 (591)
                      |++.|...+.+++|+.+|
T Consensus         9 C~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCCEESSHHHHHHHHGGG
T ss_pred             HHHHhhchHHHHHHhhcc
Confidence            677777777777776665

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.64  E-value=0.8  Score=23.35  Aligned_cols=18  Identities=22%  Similarity=0.652  Sum_probs=8.6

Q ss_pred             CCccCccccCChhhHHHH
Q psy8499         486 KCDLCSKEFSTKCSLTEH  503 (591)
Q Consensus       486 ~C~~C~~~f~~~~~L~~H  503 (591)
                      .|..||+...+...++.|
T Consensus         4 tc~hcgkqlks~~gmkyh   21 (30)
T d2ctda2           4 TCHHCGKQLRSLAGMKYH   21 (30)
T ss_dssp             CCSSSCCCCSSHHHHHHH
T ss_pred             echhHHHHHhhccCceEE
Confidence            444444444444444444

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=81.85  E-value=0.33  Score=24.77  Aligned_cols=24  Identities=25%  Similarity=0.690  Sum_probs=15.6

Q ss_pred             cccCc--CccccccchhHHhHhhhcc
Q psy8499         566 YKCDL--CTKEFSRKGRLTEHMKLHL  589 (591)
Q Consensus       566 ~~C~~--C~~~f~~~~~l~~H~~~H~  589 (591)
                      |.|+.  |+..|+++.+++.|...-+
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            45543  7777777777777765543

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.76  E-value=0.23  Score=32.10  Aligned_cols=37  Identities=19%  Similarity=0.468  Sum_probs=25.0

Q ss_pred             CccccccccccccCChhhHHHHHHhhCCCccccCccccc
Q psy8499         104 DIGYKCDLCSKEYSYKHTLTEHMKLHQGIRYKCDLCSKE  142 (591)
Q Consensus       104 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~  142 (591)
                      ...|.|+.|+++|+....+..  -......|.|..|+..
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L--~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL--FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH--EETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh--cCcCCCeEEecCCCCE
Confidence            356999999999976655432  1223346899999754

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=80.62  E-value=0.15  Score=33.08  Aligned_cols=35  Identities=23%  Similarity=0.468  Sum_probs=24.5

Q ss_pred             CCCCcchhhcCChhhHHHHhhhcCCcccccCcCcccc
Q psy8499         539 NKCDLCSKEFSTKHTLTEHMKLHQGIRYKCDLCTKEF  575 (591)
Q Consensus       539 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~C~~C~~~f  575 (591)
                      |+|+.|+++|+...+++.  -......|.|..|+-..
T Consensus        15 y~Cp~C~~~ys~Lda~~L--~d~~~~~F~C~~C~~el   49 (62)
T d1vd4a_          15 FKCPVCSSTFTDLEANQL--FDPMTGTFRCTFCHTEV   49 (62)
T ss_dssp             EECSSSCCEEEHHHHHHH--EETTTTEEBCSSSCCBC
T ss_pred             eECCCCCCCcchhhHHHh--cCcCCCeEEecCCCCEE
Confidence            689999999888777654  22233468899997653