Psyllid ID: psy8793

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-----
Protein Sequence
WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARNVLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccHHHHHccccccccccccccccccccccccHHHHcccccccccccHHHHHcccccccccccccHHHHHcccccccccccccccHHcccccccccccccccccccccccccccccccHHHHHHHcccccccccccccccccccccccccHHHHHccccccccccccccccccccccccccHHHHHcccccccccccccccccccccccHHHHcccccccccccccccccccccccHHHHHHcccccccccccccccccccccccHHHHccccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHccccccccccccccEcccccHHHccccccEccccccccccccccccEcccccccHHHHHHHHccccccccccHHcHHHHHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHccccccEEccccccccEEccHHHHHHHHHHHcccccccccccccccccEccccHHHHHHHHcccccccccccccccEccccHHHHHHHHccccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHH
Coil and Loop (DISEMBL)
whqgikqyqcsqcpkafnqkgnlkehfrihtgekpftcnicsrkfttySQVRRSSNTSARNVLKLStrkgtsrsISESIRernrspviyvaessplilRLGGILFIFTNLSGALVNAFyfgsggwwfksksshkiylghklhlkrhtgekphtcelcskgflsaesykchlrrhkgekpvtctfencTETFVESWAMRkhvrtchnkptvnrfpcdkcekvySCASSLTKHMkarlgrqpvscdichkefthpssvlyhkqsihnneifkctkcdKVFQHIQLLNRhqlvhmdtrpyqcpqcpmayktNISLSAHLMkhtgakpyVCEICNKVLTHRSSLISHYR
Flexible Loop (DISEMBL)
whqgikqyqcsqcpKAFNQKGNLKEHFRIHtgekpftcnicsRKFTtysqvrrssntsarnvlklstrkgtsrsisesirernrspviyvAESSPLILRLGGILFIFTNLSGALVNAFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHlrrhkgekpvtctfeNCTETFVESWAMRKHVRtchnkptvnrfpcdkcEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRsslishyr
Low Complexity Region (SEG)
WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARNVLKLSTRKGTsrsisesirernrsPVIYVAESSPlilrlggilfifTNLSGALVNAFYfgsggwwfkskssHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR
Disordered region (IsUnstruct)
*********CSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS*************************************VIYVAESSPLILRLGGILFIFTNLSGALVNAFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRS*******
Disordered Region (DISOPRED)
WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARNVLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLI*HY*
Disordered Region (DISEMBL)
WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTY***********RNVLK*****************RNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR
Disordered Region (DISPRO)
****IKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARNVLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLI****
Transmembrane Helix (TMHMM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiHHHHHHHHHHHHHHHHHHHHHHHHHooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
oooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooHHHHHHHHHHHHHHHHHHHHHHHHHiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARNVLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	345	2.2.26 [Sep-21-2011]
P35789	620	Zinc finger protein 93 OS	yes	N/A	0.950	0.529	0.340	4e-43
Q9P2J8	865	Zinc finger protein 624 O	no	N/A	0.959	0.382	0.324	3e-41
Q6ZN57	461	Zinc finger protein 2 hom	no	N/A	0.956	0.715	0.327	1e-40
Q14591	655	Zinc finger protein 271 O	no	N/A	0.950	0.500	0.336	1e-40
Q9HCG1	818	Zinc finger protein 160 O	no	N/A	0.950	0.400	0.327	3e-40
Q5R8X1	613	Zinc finger protein 665 O	no	N/A	0.950	0.535	0.327	4e-40
P08043	459	Zinc finger protein 2 OS=	no	N/A	0.950	0.714	0.331	7e-40
Q8IYB9	648	Zinc finger protein 595 O	no	N/A	0.878	0.467	0.328	9e-40
Q8C827	914	Zinc finger protein 62 OS	no	N/A	0.889	0.335	0.323	2e-39
Q3SYV7	487	Zinc finger protein 345 O	no	N/A	0.959	0.679	0.318	2e-39

>sp|P35789|ZNF93_HUMAN Zinc finger protein 93 OS=Homo sapiens GN=ZNF93 PE=2 SV=4

 Score =  175 bits (444), Expect = 4e-43,   Method: Compositional matrix adjust.
 Identities = 118/347 (34%), Positives = 167/347 (48%), Gaps = 19/347 (5%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
           H G K Y+C +C KAFNQ   L +H +IHTGEKP+ C  C + F   S + +        
Sbjct: 251 HTGKKPYKCEECGKAFNQSSTLTKHKKIHTGEKPYKCEECGKAFNQSSTLTKHKKIHTGE 310

Query: 62  VLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFG 121
              +    G +   S  +    R   I+  E  P      G  FI    S  L    +  
Sbjct: 311 KPYVCEECGKAFKYSRILTTHKR---IHTGEK-PYKCNKCGKAFI---ASSTLSRHEFIH 363

Query: 122 SGGWWFKSKSSHKIYLGHKL---HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEK 178
            G   +K +   K ++   +   H + HTGEKP+ CE C K F  + +   H R H GEK
Sbjct: 364 MGKKHYKCEECGKAFIWSSVLTRHKRVHTGEKPYKCEECGKAFKYSSTLSSHKRSHTGEK 423

Query: 179 PVTCTFENCTETFVESWAMRKH-VRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLG 237
           P  C  E C + FV S  + KH +     KP    + C++C K ++ +SSLTKH K   G
Sbjct: 424 PYKC--EECGKAFVASSTLSKHEIIHTGKKP----YKCEECGKAFNQSSSLTKHKKIHTG 477

Query: 238 RQPVSCDICHKEFTHPSSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDTRP 296
            +P  C+ C K F   SS+  HK+ IH  E  +KC +C K F     L +H+ +H   +P
Sbjct: 478 EKPYKCEECGKAFNQSSSLTKHKK-IHTGEKPYKCEECGKAFNQSSTLIKHKKIHTREKP 536

Query: 297 YQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH 343
           Y+C +C  A+  +  L+ H + HTG KPY C  C K   H ++L SH
Sbjct: 537 YKCEECGKAFHLSTHLTTHKILHTGEKPYRCRECGKAFNHSATLSSH 583

May be involved in transcriptional regulation.
Homo sapiens (taxid: 9606)

>sp|Q9P2J8|ZN624_HUMAN Zinc finger protein 624 OS=Homo sapiens GN=ZNF624 PE=2 SV=3

 Score =  169 bits (427), Expect = 3e-41,   Method: Compositional matrix adjust.
 Identities = 122/376 (32%), Positives = 164/376 (43%), Gaps = 45/376 (11%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS--QVRRSSNTSA 59
           H G K Y+C++C KAFN+  N  EH RIHTGEKP+ CN C + F  YS   V    +T  
Sbjct: 494 HTGEKPYECNECGKAFNRIANFTEHQRIHTGEKPYKCNECGKAFINYSCLTVHHRMHTGE 553

Query: 60  RNVLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFY 119
           +        K   RS S  I +R     I+  E   L    G    I ++L+  +    +
Sbjct: 554 KPYKCTECGKAFMRSSSLIIHQR-----IHTEEKPYLCNECGESFRIKSHLT--VHQRIH 606

Query: 120 FGSGGW-----------WFKSKSSHKIYLGHK------------------LHLKRHTGEK 150
            G   +               K   KI+ G K                  +H + HTGEK
Sbjct: 607 TGEKPYKCTDCERAFTKMVNLKEHQKIHTGVKPYKCYDCGKSFRTKSYLIVHQRTHTGEK 666

Query: 151 PHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRT-CHNKPT 209
           P+ C  C K F +      H RRH GEKP  C    C + F  +     H RT    KP 
Sbjct: 667 PYKCNECEKAFTNTSQLTVHQRRHTGEKPYKCN--ECGKVFTSNSGFNTHQRTHTGEKP- 723

Query: 210 VNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIF 269
              F C+ C K +S    +T+H K   G +P  CD+C K F   S +  H ++    + +
Sbjct: 724 ---FKCNDCGKAFSQMVHVTEHQKIHSGEKPYKCDVCGKAFRRGSYLTVHWRTHTGEKPY 780

Query: 270 KCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI 329
            C +C K    +  L  HQ +H   RPY+C +C  A++TN   + HL  HTG KPY C  
Sbjct: 781 TCKECGKGCITLSQLTLHQRIHTGERPYKCEECGKAFRTNSDFTVHLRMHTGEKPYKCNE 840

Query: 330 CNKVLTHRSSLISHYR 345
           C K     SSL  H R
Sbjct: 841 CGKAFRSSSSLTVHQR 856

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q6ZN57|ZFP2_HUMAN Zinc finger protein 2 homolog OS=Homo sapiens GN=ZFP2 PE=2 SV=1

 Score =  167 bits (423), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 122/373 (32%), Positives = 173/373 (46%), Gaps = 43/373 (11%)

Query: 4   GIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQ--VRRSSNTSARN 61
           G K Y+C+QC K F+Q  +L +H RIHTGEKP+ CN+C + F   S   V +  +T  + 
Sbjct: 98  GKKIYECNQCSKTFSQSSSLLKHQRIHTGEKPYKCNVCGKHFIERSSLTVHQRIHTGEKP 157

Query: 62  VLKLSTRKGTSRSISESIRER-------------------NRSPV----IYVAESSPLIL 98
                  K  S+S++ ++ +R                   N S +    I+  E      
Sbjct: 158 YKCNECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFHKNSSLIQHERIHTGEKPYKCN 217

Query: 99  RLGGILFIFTNL-----SGALVNAFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHT 153
             G       NL     +      +     G  F S+S H I     +H + HTGEKP+ 
Sbjct: 218 ECGKAFTQSMNLTVHQRTHTGEKPYECNECGKAF-SQSMHLI-----VHQRSHTGEKPYE 271

Query: 154 CELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRF 213
           C  C K F  + +   H R H GEKP  C    C ++F +S  + +H R       V  F
Sbjct: 272 CSQCGKAFSKSSTLTLHQRNHTGEKPYKCN--KCGKSFSQSTYLIEHQRL---HSGVKPF 326

Query: 214 PCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE-IFKCT 272
            C++C K +S  SSLT+H +   G +P  C +C K FT  SS+  H Q IH  E  ++C 
Sbjct: 327 ECNECGKAFSKNSSLTQHRRIHTGEKPYECMVCGKHFTGRSSLTVH-QVIHTGEKPYECN 385

Query: 273 KCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNK 332
           +C K F     L  HQ +H   +PY+C QC  A+  N SL+ H   HTG KPY C  C K
Sbjct: 386 ECGKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLTVHQRTHTGEKPYQCNECGK 445

Query: 333 VLTHRSSLISHYR 345
             +  ++L  H R
Sbjct: 446 AFSRSTNLTRHQR 458

Probable transcription factor involved in neuronal differentiation and/or phenotypic maintenance.

Homo sapiens (taxid: 9606)

>sp|Q14591|ZN271_HUMAN Zinc finger protein 271 OS=Homo sapiens GN=ZNF271 PE=2 SV=4

 Score =  167 bits (422), Expect = 1e-40,   Method: Compositional matrix adjust.
 Identities = 118/351 (33%), Positives = 176/351 (50%), Gaps = 23/351 (6%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQV--RRSSNTSA 59
           H G K Y+C  C KAF+Q  +L  H RIHTGEKP+ CN CS+ F+  S +   R  +T  
Sbjct: 224 HTGEKPYKCDVCGKAFSQSSDLILHQRIHTGEKPYPCNQCSKSFSQNSDLIKHRRIHTGE 283

Query: 60  RNVLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFY 119
           +        K  ++S    + +R     I+  E      +       F+ LS  L+N   
Sbjct: 284 KPYKCNECGKAFNQSSVLILHQR-----IHTGEKPYPCDQCSKT---FSRLSD-LINHQR 334

Query: 120 FGSGGWWFKSKSSHKIYLGHKL---HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKG 176
             +G   +     +K++        H + HTGEKP+ C+ C K F  + +   H R H G
Sbjct: 335 IHTGEKPYPCNQCNKMFSRRSDLVKHHRIHTGEKPYECDECGKTFSQSSNLILHQRIHTG 394

Query: 177 EKPVTCTFENCTETFVESWAMRKHVRT-CHNKPTVNRFPCDKCEKVYSCASSLTKHMKAR 235
           EKP  C+  +CT++F     + KH R     KP    + C++C+K +S +S LTKH +  
Sbjct: 395 EKPYACS--DCTKSFSRRSDLVKHQRIHTGEKP----YACNQCDKSFSQSSDLTKHQRVH 448

Query: 236 LGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDT 294
            G +P  C+ C K F+  S ++ H Q IH  E  + CT+C K F  I  L +HQ +H   
Sbjct: 449 SGEKPYHCNSCEKAFSQSSDLILH-QRIHTGEKYYLCTQCSKSFSQISDLIKHQRIHTGE 507

Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +PY+C +C  A+    +L+ H   HTG KP  C+ C K  + RS LI+H +
Sbjct: 508 KPYKCSECRKAFSQCSALTLHQRIHTGKKPNPCDECGKSFSRRSDLINHQK 558

May be involved in transcriptional regulation. Plays a role in the EBV-mediated transformation process.

Homo sapiens (taxid: 9606)

>sp|Q9HCG1|ZN160_HUMAN Zinc finger protein 160 OS=Homo sapiens GN=ZNF160 PE=2 SV=3

 Score =  166 bits (419), Expect = 3e-40,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 172/351 (49%), Gaps = 23/351 (6%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVR-RSSNTSAR 60
           H G K ++C++C K F Q  +L  H+RIHTGEKP+ CN C + F+  S +    +  +  
Sbjct: 363 HTGEKPFKCNECGKLFTQNSHLISHWRIHTGEKPYKCNECGKAFSVRSSLAIHQTIHTGE 422

Query: 61  NVLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYF 120
              K +      R  S   R R     ++  E        G    + +NL+   V     
Sbjct: 423 KPYKCNECGKVFRYNSYLGRHRR----VHTGEKPYKCNECGKAFSMHSNLATHQV----I 474

Query: 121 GSGGWWFKSKSSHKIYLGHKL---HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGE 177
            +G   FK     K++  +     H + HTGEKP+ C  C K F    S   H   H GE
Sbjct: 475 HTGTKPFKCNECSKVFTQNSQLANHRRIHTGEKPYKCNECGKAFSVRSSLTTHQAIHSGE 534

Query: 178 KPVTCTFENCTETFVESWAMRKHVRTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKAR 235
           KP  C    C ++F +   +R H R  H+  KP    + C++C KV++  S L +H +  
Sbjct: 535 KPYKCI--ECGKSFTQKSHLRSH-RGIHSGEKP----YKCNECGKVFAQTSQLARHWRVH 587

Query: 236 LGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDT 294
            G +P  C+ C + F+  SS+ +H Q+IH  E  +KC +C KVF+H   L  H+ +H   
Sbjct: 588 TGEKPYKCNDCGRAFSDRSSLTFH-QAIHTGEKPYKCHECGKVFRHNSYLATHRRIHTGE 646

Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +PY+C +C  A+  + +L+ H + HTG KPY C  C KV T  S L +H R
Sbjct: 647 KPYKCNECGKAFSMHSNLTTHKVIHTGEKPYKCNQCGKVFTQNSHLANHQR 697

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q5R8X1|ZN665_PONAB Zinc finger protein 665 OS=Pongo abelii GN=ZNF665 PE=2 SV=1

 Score =  165 bits (418), Expect = 4e-40,   Method: Compositional matrix adjust.
 Identities = 115/351 (32%), Positives = 168/351 (47%), Gaps = 23/351 (6%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNT-SAR 60
           H G K Y+C++C K F Q  +L  H RIHTGEKP+ CN C + F+  S +       +  
Sbjct: 219 HTGEKPYKCNECGKCFTQNSHLASHRRIHTGEKPYKCNECGKAFSVRSSLTTHQTIHTGE 278

Query: 61  NVLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYF 120
              K +      R  S   + R     ++  E        G    + +NL+   +     
Sbjct: 279 KPYKCNECGKVFRHNSYLTKHRR----VHTGEKPYKCNECGKAFSMHSNLTKHQI----I 330

Query: 121 GSGGWWFKSKSSHKIYLGHK---LHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGE 177
            +G   FK     K++  +     H + HTGEKP+ C+ C K F    S   H   H GE
Sbjct: 331 HTGEKPFKCNECVKVFTQYSHLANHRRIHTGEKPYRCDECGKAFSVRSSLTTHQAIHTGE 390

Query: 178 KPVTCTFENCTETFVESWAMRKHVRTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKAR 235
           KP  C   +C + F ++  +  H R  H+  KP    + CD+C K +S  S L +H +  
Sbjct: 391 KPYKCN--DCGKVFTQNSHLASH-RGIHSGEKP----YKCDECGKAFSQTSQLARHWRVH 443

Query: 236 LGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDT 294
            G +P  C+ C K F+  SS+  H Q+IH  +  +KC  C KVF+H   L  HQ +H   
Sbjct: 444 TGEKPYKCNECGKAFSVHSSLTTH-QTIHTGQKPYKCNDCGKVFRHNSYLAVHQRIHTGE 502

Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +PY+C +C  A+  + +L+ H + HTG KPY C  C KV T  S L +H R
Sbjct: 503 KPYKCNECGKAFSVHSNLATHQVIHTGEKPYKCNECGKVFTQNSHLANHRR 553

May be involved in transcriptional regulation.

Pongo abelii (taxid: 9601)

>sp|P08043|ZFP2_MOUSE Zinc finger protein 2 OS=Mus musculus GN=Zfp2 PE=2 SV=2

 Score =  164 bits (416), Expect = 7e-40,   Method: Compositional matrix adjust.
 Identities = 123/371 (33%), Positives = 171/371 (46%), Gaps = 43/371 (11%)

Query: 6   KQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQ--VRRSSNTSARNVL 63
           K Y C +C K F Q  +L +H RIHTGEKP+TCN+C + F   S   V + ++T  +   
Sbjct: 98  KVYGCDECGKTFRQSSSLLKHQRIHTGEKPYTCNVCDKHFIERSSLTVHQRTHTGEKPYK 157

Query: 64  KLSTRKGTSRSISESIRER-------------------NRSPV----IYVAESSPLILRL 100
                K  S+S++ ++ +R                   N S +    I+  E        
Sbjct: 158 CHECGKAFSQSMNLTVHQRTHTGEKPYQCKECGKAFRKNSSLIQHERIHTGEKPYKCHDC 217

Query: 101 GGILFIFTNL-----SGALVNAFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCE 155
           G       NL     +      +     G  F S+S H I     +H + HTGEKP+ C 
Sbjct: 218 GKAFTQSMNLTVHQRTHTGEKPYECNQCGKAF-SQSMHLI-----VHQRSHTGEKPYECS 271

Query: 156 LCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPC 215
            C K F  + +   H R H GEKP  C    C ++F +S  + +H R       V  F C
Sbjct: 272 ECGKAFSKSSTLTLHQRNHTGEKPYKCN--KCGKSFSQSTYLIEHQRL---HSGVKPFEC 326

Query: 216 DKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE-IFKCTKC 274
           ++C K +S  SSLT+H +   G +P  C IC K FT  SS+  H Q IH  E  ++CT+C
Sbjct: 327 NQCGKAFSKNSSLTQHRRIHTGEKPYECMICGKHFTGRSSLTVH-QVIHTGEKPYECTEC 385

Query: 275 DKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVL 334
            K F     L  HQ +H   +PY+C QC  A+  N SL  H   HTG KPY C  C K  
Sbjct: 386 GKAFSQSAYLIEHQRIHTGEKPYECDQCGKAFIKNSSLIVHQRIHTGEKPYQCNECGKSF 445

Query: 335 THRSSLISHYR 345
           +  ++L  H R
Sbjct: 446 SRSTNLTRHQR 456

Probable transcription factor involved in neuronal differentiation and/or phenotypic maintenance.

Mus musculus (taxid: 10090)

>sp|Q8IYB9|ZN595_HUMAN Zinc finger protein 595 OS=Homo sapiens GN=ZNF595 PE=2 SV=1

 Score =  164 bits (415), Expect = 9e-40,   Method: Compositional matrix adjust.
 Identities = 113/344 (32%), Positives = 161/344 (46%), Gaps = 41/344 (11%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
           H G K Y+C +C KAF Q  +L EH  IHTGEKP+TC  C + F   S +    +  +  
Sbjct: 306 HTGEKPYKCKECGKAFRQSRSLNEHKNIHTGEKPYTCEKCGKAFNQSSSLIIHRSIHSEQ 365

Query: 62  VLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFG 121
            L      G + + S S+ +  R   I+  E        G               AFY  
Sbjct: 366 KLYKCEECGKAFTWSSSLNKHKR---IHTGEKPYACEECG--------------KAFY-- 406

Query: 122 SGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVT 181
                   +SSH        H + HTGEKP+TCE C K F  + +   H R H G+KP  
Sbjct: 407 --------RSSHLA-----KHKRIHTGEKPYTCEECGKAFNQSSTLILHKRIHSGQKPYK 453

Query: 182 CTFENCTETFVESWAMRKHVRT-CHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQP 240
           C  E C + F  S  + +H +     KP    + C++C K +  ++SL +H     G +P
Sbjct: 454 C--EECGKAFTRSTTLNEHKKIHTGEKP----YKCEECGKAFIWSASLNEHKNIHTGEKP 507

Query: 241 VSCDICHKEFTHPSSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQC 299
             C  C K F   S ++ H+ SIH+ + ++KC +C K F     LN H+ +H   +PY+C
Sbjct: 508 YKCKECGKAFNQSSGLIIHR-SIHSEQKLYKCEECGKAFTRSTALNEHKKIHSGEKPYKC 566

Query: 300 PQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH 343
            +C  AY  + +L+ H   HTG KP+ CE C K     SSL  H
Sbjct: 567 KECGKAYNLSSTLTKHKRIHTGEKPFTCEECGKAFNWSSSLTKH 610

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q8C827|ZFP62_MOUSE Zinc finger protein 62 OS=Mus musculus GN=Zfp62 PE=2 SV=1

 Score =  163 bits (412), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 119/368 (32%), Positives = 172/368 (46%), Gaps = 61/368 (16%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
           H G K Y+C +C KAF     L  H RIHTGEKP+ C+IC + F+  S +  + + S   
Sbjct: 349 HTGEKPYECDECGKAFRNSSGLIVHKRIHTGEKPYKCDICGKAFSYSSGL--AVHKSIHP 406

Query: 62  VLKLSTRKGTSRSIS-ESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYF 120
             K    K   +S S  S+  ++++  I+  E  P +  + G    F N SG        
Sbjct: 407 GKKAHECKDCGKSFSYNSLLLQHKT--IHTGER-PYVCDVCGK--TFRNNSGL------- 454

Query: 121 GSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPV 180
                              K+H + HTGEKP+ C++C K ++S  S K H   H GEKP 
Sbjct: 455 -------------------KVHRRLHTGEKPYKCDVCGKAYISRSSLKNHKGIHMGEKPY 495

Query: 181 TCTFENCTETFVESWAMRKHVRT-CHNKP-----------------------TVNR-FPC 215
            C++  C ++F  S A+ +H R     KP                       T  R + C
Sbjct: 496 KCSY--CEKSFNYSSALEQHKRIHTREKPFGCDECGKAFRNNSGLKVHKRIHTGERPYKC 553

Query: 216 DKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCD 275
           ++C K Y   SSL  H     G +P  CD C K F    ++L HK+     + +KC  C+
Sbjct: 554 EECGKAYISLSSLINHKSVHPGEKPFKCDECEKAFITYRTLLNHKKIHLGEKPYKCDVCE 613

Query: 276 KVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLT 335
           K F +  LL++H+ VH   +P++C +C   ++ N SL  H   HTG KPY C+IC K   
Sbjct: 614 KSFNYTSLLSQHKRVHTREKPFECDRCEKVFRNNSSLKVHKRIHTGEKPYECDICGKAYI 673

Query: 336 HRSSLISH 343
             SSLI+H
Sbjct: 674 SHSSLINH 681

May play a role in differentiating skeletal muscle.

Mus musculus (taxid: 10090)

>sp|Q3SYV7|ZN345_BOVIN Zinc finger protein 345 OS=Bos taurus GN=ZNF345 PE=2 SV=1

 Score =  163 bits (412), Expect = 2e-39,   Method: Compositional matrix adjust.
 Identities = 111/348 (31%), Positives = 159/348 (45%), Gaps = 17/348 (4%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
           H G K Y+C +C KAF    NL  H RIHTGEKP+ CN C + F + S +          
Sbjct: 84  HTGEKPYECKECGKAFGSGANLAYHQRIHTGEKPYECNECGKAFGSGSNLTHHQRIHTGE 143

Query: 62  VLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFG 121
                   G + S    +    R  +I+  E  P   ++ G  F F +   AL       
Sbjct: 144 KPYECKECGKAFSFGSGL---IRHQIIHSGEK-PYECKVCGKSFSFES---ALTRHHRIH 196

Query: 122 SGGWWFKSKSSHKIY-LGHKL--HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEK 178
           +G   ++ K   K +  G  L  H + HTGEKP+ C+ C   F S  +   H R H GEK
Sbjct: 197 TGEKPYECKDCGKAFGSGSNLTQHRRVHTGEKPYECKGCGMAFSSGSALTRHQRIHTGEK 256

Query: 179 PVTCTFENCTETFVESWAMRKHVRT-CHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLG 237
           P  C    C + F    A+ +H R     KP V    C +C K ++  S LT+H +   G
Sbjct: 257 PYICN--ECGKAFSFGSALTRHQRIHTGEKPYV----CKECGKAFNSGSDLTQHQRIHTG 310

Query: 238 RQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPY 297
            +P  C  C K F   S ++ H++     + ++C +C K F     L +HQ +H   +PY
Sbjct: 311 EKPYECKECEKAFRSGSKLIQHQRMHTGEKPYECKECGKAFSSGSDLTQHQRIHTGEKPY 370

Query: 298 QCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +C +C  A+ +   L  H + HTG KPY C  C K  +  S+L  H R
Sbjct: 371 ECKECGKAFASGSKLIQHQLIHTGEKPYECRECRKSFSSGSALNRHQR 418

May be involved in transcriptional regulation.

Bos taurus (taxid: 9913)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
326666708	839	PREDICTED: zinc finger protein 135 [Dani	0.950	0.390	0.357	2e-44
326667255	908	PREDICTED: zinc finger protein 91-like [	0.965	0.366	0.336	6e-43
326667110	1395	PREDICTED: zinc finger protein 729-like,	0.950	0.235	0.336	8e-43
326681231	468	PREDICTED: zinc finger protein 271-like	0.933	0.688	0.362	1e-42
328711363	643	PREDICTED: zinc finger protein 845-like	0.947	0.508	0.318	1e-42
326666826	434	PREDICTED: zinc finger protein 135-like	0.956	0.760	0.352	2e-42
326667224	437	PREDICTED: zinc finger protein 135-like	0.950	0.750	0.350	3e-42
397522308	1103	PREDICTED: zinc finger protein 624-like	0.947	0.296	0.346	8e-42
260795613	583	hypothetical protein BRAFLDRAFT_65381 [B	0.971	0.574	0.317	8e-42
326667171	681	PREDICTED: zinc finger protein 850-like	0.953	0.483	0.337	2e-41

>gi|326666708|ref|XP_003198345.1| PREDICTED: zinc finger protein 135 [Danio rerio]

 Score =  186 bits (471), Expect = 2e-44,   Method: Compositional matrix adjust.
 Identities = 124/347 (35%), Positives = 176/347 (50%), Gaps = 19/347 (5%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
           H G K + C+QC K+FN+  +L +H RIHTGEKPFTC  C + F   S + + +      
Sbjct: 71  HTGEKPFTCTQCGKSFNRSEHLNDHMRIHTGEKPFTCIQCGKSFNCLSNLNKHTRIHTGK 130

Query: 62  VLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFG 121
                T+ G S S S S+   N+  +I+  E  P      G  FI    S +L       
Sbjct: 131 KPFTCTQCGNSFSCSSSL---NQHMMIHTGEK-PFTCTQCGKSFI---RSSSLKLHMRIH 183

Query: 122 SGGWWFKSKSSHKIYLGH---KLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEK 178
           +G   F      K ++     KLH++ HTG+KP TC  C K F  + S   H+R H GEK
Sbjct: 184 TGEKPFTCTQCGKSFIKSSSLKLHMRIHTGDKPFTCTQCGKSFSQSSSLNHHMRIHTGEK 243

Query: 179 PVTCTFENCTETFVESWAMRKHVRT-CHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLG 237
           P TCT   C + F++S ++  H+     ++P    F C +C K +SC+S L  H++   G
Sbjct: 244 PFTCT--QCGKNFIKSSSLNHHIGIHTGDRP----FTCTQCGKSFSCSSHLNHHIRIHTG 297

Query: 238 RQPVSCDICHKEFTHPSSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDTRP 296
            +P +C  C K F+  SS L H   IH  E  F CT+C K F     LN H ++H   +P
Sbjct: 298 EKPFTCTQCGKSFS-CSSHLNHHMRIHTGEKPFTCTQCGKSFSRSSSLNIHMMIHTGEKP 356

Query: 297 YQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH 343
           + C QC  ++  ++SL+ H M HTG KP+ C  C K  +  SSL  H
Sbjct: 357 FTCTQCGKSFNKSLSLNLHKMSHTGEKPFTCNQCGKSFSQSSSLNIH 403

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667255|ref|XP_003198540.1| PREDICTED: zinc finger protein 91-like [Danio rerio]

 Score =  181 bits (458), Expect = 6e-43,   Method: Compositional matrix adjust.
 Identities = 126/374 (33%), Positives = 180/374 (48%), Gaps = 41/374 (10%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
           H G K + C+QC K+FN+  NL +H RIHTGEKP TC +C + F   S + +   T    
Sbjct: 367 HTGEKPFTCTQCGKSFNRSSNLDQHIRIHTGEKPITCTLCGKSFRQSSSLSKHMRTHTGE 426

Query: 62  VLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGAL-----VN 116
                T+ G S S S +     R   I+  E      + G      ++L+  +       
Sbjct: 427 KPFTCTQCGKSFSQSSNFNLHMR---IHTGEKPFTCTQCGKSFRQASSLNKHMRTHTGEK 483

Query: 117 AFYFGSGGWWFKSKSSH-----KIYLGHK------------------LHLKRHTGEKPHT 153
            F     G  F ++SSH     +I+ G K                   H++ HTGEKP T
Sbjct: 484 PFTCTQCGKSF-NRSSHLNQHIRIHTGEKPITCTQCGKSFRQSSSLYKHMRIHTGEKPFT 542

Query: 154 CELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRT-CHNKPTVNR 212
           C  C K F  + ++  H+R H GEKP+TCT   C ++F +S ++ KH+R     KP    
Sbjct: 543 CTQCGKSFSQSSNFNLHMRIHTGEKPITCT--QCGKSFHQSSSLYKHMRIHTGEKP---- 596

Query: 213 FPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE-IFKC 271
           F C +C K +  ASSL KHM+   G +P++C  C K F   SS LY    IH  E  F C
Sbjct: 597 FTCTQCGKSFRQASSLNKHMRIHTGEKPITCTQCGKSFRQ-SSSLYKHMRIHTGEKPFTC 655

Query: 272 TKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICN 331
           T+C K F+    LN+H  +H   +P+ C QC +++  +  L  H+  HTG KP+ C  C 
Sbjct: 656 TQCGKSFRQTSSLNKHMRIHTGEKPFTCTQCGISFNCSSYLKQHMRIHTGEKPFTCTQCG 715

Query: 332 KVLTHRSSLISHYR 345
           +     S+L  H R
Sbjct: 716 RSFNRSSNLDHHMR 729

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667110|ref|XP_003198489.1| PREDICTED: zinc finger protein 729-like, partial [Danio rerio]

 Score =  180 bits (457), Expect = 8e-43,   Method: Compositional matrix adjust.
 Identities = 126/375 (33%), Positives = 182/375 (48%), Gaps = 47/375 (12%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
           H G K +QC+QC K+F+   +L +H RIHTGEKPFTC+ C + F + S + +        
Sbjct: 4   HTGEKPFQCTQCGKSFSHSSSLNQHMRIHTGEKPFTCSQCGKSFNSLSLLNKHMKIHTGE 63

Query: 62  VLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFG 121
                T+ G S S S S+ +  R   I+  E  P      G  F     S +L       
Sbjct: 64  KPFTCTQCGKSFSQSTSLNQHMR---IHTGEK-PFTCTQCGKSF---RQSSSLNQHMKIH 116

Query: 122 SG-------------GWWFKSKSSHKIYLGHK------------------LHLKRHTGEK 150
           +G              W  K K+  +I+ G K                   H+K HTGEK
Sbjct: 117 TGEKPFTCTQCGKSFNWSCKLKTHMRIHTGEKPFTCTQCGKSFSKSSSLYRHMKIHTGEK 176

Query: 151 PHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRT-CHNKPT 209
           P TC  C K F  +     H+R H GEKP+TC    C ++F +S ++ +H++     KP 
Sbjct: 177 PFTCTHCGKSFNHSSFLNLHMRIHTGEKPLTC--PQCGKSFSKSSSLYRHMKIHTGEKP- 233

Query: 210 VNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE-I 268
              F C +C K ++C+SSL KHM+   G +P +C  C K F+H SS+  H + IH  E  
Sbjct: 234 ---FTCTQCGKSFNCSSSLNKHMRIHTGEKPFTCTQCGKSFSHSSSLNQHMR-IHTGEKP 289

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
           F C +C K F +   LN+H ++H   +P+ C QC  ++  + SL+ H+  HTG KP+ C 
Sbjct: 290 FTCPQCGKSFINSSHLNQHIMIHTGEKPFTCTQCGKSFNCSSSLNKHMRIHTGEKPFTCT 349

Query: 329 ICNKVLTHRSSLISH 343
            C K  +  SSL  H
Sbjct: 350 QCGKSFSQSSSLNQH 364

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326681231|ref|XP_003201754.1| PREDICTED: zinc finger protein 271-like [Danio rerio]

 Score =  180 bits (456), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 125/345 (36%), Positives = 175/345 (50%), Gaps = 23/345 (6%)

Query: 8   YQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARNVLKLST 67
           + C++C K+   K  LK H RIHTGEKPFTC  C + F+  S + +             T
Sbjct: 77  FTCTKCGKSLASKSKLKTHMRIHTGEKPFTCTQCGKSFSHSSSLNQHMRIHTGEKPFTCT 136

Query: 68  RKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFGSGGWWF 127
           + G S S S S+ +  R   I+  E  P      G  F   + S +L       +GG  F
Sbjct: 137 QCGKSFSHSSSLNQHMR---IHTGEK-PFSCTQCGKSF---SKSSSLYKHMKIHTGGKPF 189

Query: 128 K----SKS-SHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                 KS +H  +L   LH++ HTGEKP TC  C K F  + S   H++ H GEKP TC
Sbjct: 190 TCTHCGKSFNHSSFLN--LHMRIHTGEKPLTCPQCGKSFSKSSSLYKHMKIHIGEKPFTC 247

Query: 183 TFENCTETFVESWAMRKHVRT-CHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPV 241
           T   C ++F +S  ++KH+R     KP    F C +C K ++C+S L KHM    G +P 
Sbjct: 248 T--QCGKSFYDSSYLKKHMRIHTGEKP----FTCAQCGKSFNCSSHLKKHMMIHTGEKPF 301

Query: 242 SCDICHKEFTHPSSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP 300
           +C  C K F+  SS LY    IH  E  F CT+C K F H   LN+H ++H   +P+ CP
Sbjct: 302 TCTQCGKSFS-KSSSLYRHMRIHTGEKPFTCTQCGKSFSHSSSLNQHIMIHTGEKPFTCP 360

Query: 301 QCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           QC  ++  + +L+ H+  HTG KP+ C  C K  +  S L  H +
Sbjct: 361 QCGKSFIHSSNLNLHMRIHTGEKPFTCSQCGKSFSTSSHLKQHMK 405

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|328711363|ref|XP_001946669.2| PREDICTED: zinc finger protein 845-like [Acyrthosiphon pisum]

 Score =  179 bits (455), Expect = 1e-42,   Method: Compositional matrix adjust.
 Identities = 112/352 (31%), Positives = 172/352 (48%), Gaps = 25/352 (7%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKF---TTYSQVRRSSNTS 58
           H G K Y C  C K+F+Q+G L+ H R HTGEKP+ C++C + F   +T ++ RR+    
Sbjct: 39  HTGEKPYSCDVCDKSFSQRGTLEYHLRTHTGEKPYPCDVCEKTFGSSSTLTKHRRTHTGE 98

Query: 59  ARNVLKLSTRK-GTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNA 117
                 +  +  G+S +++E  R        +  E  P    +    F     SG L   
Sbjct: 99  KPYPCDVCDKTFGSSSTLTEHRR-------THTGE-KPYSCDVCDKTF---GSSGTLTKH 147

Query: 118 FYFGSGGWWFKSKSSHKIYLGHKL---HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRH 174
               +G   +      K +        H + HTGEKP+ C++C K F S+ +   H R H
Sbjct: 148 RRTHTGEKPYPCDVCDKTFGSSSTLTEHRRTHTGEKPYPCDVCDKTFGSSSNLTEHRRTH 207

Query: 175 KGEKPVTCTFENCTETFVESWAMRKHVRT-CHNKPTVNRFPCDKCEKVYSCASSLTKHMK 233
            GEKP  C  + C +TF  S  + +H RT    KP    +PCD C+K +  +S+LTKH +
Sbjct: 208 TGEKPYPC--DVCDKTFGSSSNLTEHRRTHTGEKP----YPCDVCDKTFGSSSTLTKHRR 261

Query: 234 ARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMD 293
              G +P SCD+C K F   S++  H+++    + + C  CDK F     L +H+  H  
Sbjct: 262 THTGEKPYSCDVCDKTFGSSSNLTKHRRTHTGEKPYSCDVCDKTFGSSSNLTKHRRTHTG 321

Query: 294 TRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
            +PY C  C   + ++ +L+ H   HTG KPY C++C+K      +L  H R
Sbjct: 322 EKPYPCDVCDKTFGSSNTLTEHRRTHTGEKPYPCDVCDKTFGSSGTLTKHRR 373

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|326666826|ref|XP_003198388.1| PREDICTED: zinc finger protein 135-like [Danio rerio]

 Score =  179 bits (454), Expect = 2e-42,   Method: Compositional matrix adjust.
 Identities = 123/349 (35%), Positives = 167/349 (47%), Gaps = 19/349 (5%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
           H G + + C+QC K+FNQ  NL  H RIHTGEKPFTC  C + F   S +        R 
Sbjct: 31  HTGEQPFTCTQCGKSFNQPSNLNLHMRIHTGEKPFTCTQCGKNFIHSSHLNEHMRIHTRE 90

Query: 62  VLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGALVNAFYFG 121
                T+ G S S S S+   NR   I+  ES P      G  F   +LS  L       
Sbjct: 91  KPFTCTQCGKSFSQSASL---NRHMRIHTGES-PFTCTQCGKSF---SLSSYLNKHMRIH 143

Query: 122 SGGWWFKSKSSHKIY---LGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEK 178
           +G   F      KI+       +H++ HTGEKP TC  C + F  + S   H+R H GEK
Sbjct: 144 TGEKPFTCTQCGKIFSNLFSFTIHMRIHTGEKPFTCTHCGRSFNRSSSLNLHMRIHTGEK 203

Query: 179 PVTCTFENCTETFVESWAMRKHVRT-CHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLG 237
           P TCT   C ++F +S  +  H++     KP    F C +C K ++  S L  HM+   G
Sbjct: 204 PFTCT--QCGKSFNQSSHLNNHMKIHTGEKP----FTCTQCGKSFNQLSYLNLHMRIHTG 257

Query: 238 RQPVSCDICHKEFTHPSSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDTRP 296
            +P +C  C + F   SS+  H + IH  E  F CT+C K F     LN H  +H   +P
Sbjct: 258 EKPFTCTQCGRSFNRSSSLNLHMR-IHTGEKPFTCTQCGKSFNRSSHLNNHMKIHTGEKP 316

Query: 297 YQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           + C QC  ++  +  L+ H+  HTG KP+ C  C K     SSL  H +
Sbjct: 317 FTCTQCGKSFSQSTYLNKHMRIHTGEKPFTCTQCEKSFNQSSSLNKHMK 365

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667224|ref|XP_003198532.1| PREDICTED: zinc finger protein 135-like [Danio rerio]

 Score =  178 bits (452), Expect = 3e-42,   Method: Compositional matrix adjust.
 Identities = 123/351 (35%), Positives = 170/351 (48%), Gaps = 23/351 (6%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
           H G K + C+QC K+FN+  +L +H RIHTGEKPFTC  C + F   S + +        
Sbjct: 92  HTGEKPFTCTQCGKSFNRSAHLDQHMRIHTGEKPFTCTQCGKSFNRSSNLDQHIRIHTGE 151

Query: 62  VLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGAL-----VN 116
                T+ G S   S SI +  R   I+  E      + G      +N +  +       
Sbjct: 152 KPITCTQCGKSFRQSSSIYKHMR---IHTGEKPFTCTQCGKSFIQSSNFNLHMRIHTGEK 208

Query: 117 AFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKG 176
            F     G  F+  SS         H++ HTGEKP TC  C K F S+     H+R H G
Sbjct: 209 PFTCTQCGKSFRQASS------LNKHMRTHTGEKPFTCTQCGKSFNSSSHLNQHMRIHTG 262

Query: 177 EKPVTCTFENCTETFVESWAMRKHVRT-CHNKPTVNRFPCDKCEKVYSCASSLTKHMKAR 235
           EKP+TCT   C ++F +S ++ KH+R     KP    F C +C K +  ASSL KHM+  
Sbjct: 263 EKPITCT--QCGKSFRQSSSLYKHMRIHTGEKP----FTCTQCGKSFRQASSLNKHMRIH 316

Query: 236 LGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDT 294
            G +P +C  C K F + SS L    +IH  E  F CT+C K F+    LN H  +H   
Sbjct: 317 TGEKPFTCTQCGKSF-NCSSYLKQHMTIHTGEKPFTCTQCGKSFRQASSLNIHMRIHTGE 375

Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +P+ C QC  ++  +  L  H+  HTG KP+ C  C K  +  S+L  H R
Sbjct: 376 KPFTCTQCGKSFNRSSHLDQHMRIHTGEKPFTCTQCGKSFSQSSNLNLHMR 426

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

>gi|397522308|ref|XP_003831216.1| PREDICTED: zinc finger protein 624-like isoform 3 [Pan paniscus]

 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/352 (34%), Positives = 163/352 (46%), Gaps = 25/352 (7%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS--QVRRSSNTSA 59
           H G K Y+C++C KAFN+  N  EH RIHTGEKP+ CN C + F  YS   V    +T  
Sbjct: 368 HTGEKPYECNECGKAFNRIANFTEHQRIHTGEKPYKCNECGKAFINYSCLTVHHRMHTGE 427

Query: 60  RNVLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLS-----GAL 114
           +        K   RS S  I +R     I+  E   L    G    I ++L+        
Sbjct: 428 KPYKCTECGKAFMRSSSLIIHQR-----IHTEEKPYLCNECGESFRIKSHLTVHQRIHTG 482

Query: 115 VNAFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRH 174
              +     G  F++KS    YL   +H + HTGEKP+ C  C K F +      H RRH
Sbjct: 483 EKPYKCNDCGKSFRTKS----YL--IVHQRTHTGEKPYKCNECEKAFTNTSQLTVHQRRH 536

Query: 175 KGEKPVTCTFENCTETFVESWAMRKHVRT-CHNKPTVNRFPCDKCEKVYSCASSLTKHMK 233
            GEKP  C    C + F  +     H RT    KP    F C+ C K +S    +T+H K
Sbjct: 537 TGEKPYKCN--ECGKVFTSNSGFNTHQRTHTGEKP----FKCNDCGKAFSQMVHVTEHQK 590

Query: 234 ARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMD 293
              G +P  CD+C K F   S +  H ++    + + C +C K    +  L  HQ +H  
Sbjct: 591 IHSGEKPYKCDVCGKAFRRGSYLTVHWRTHTGEKPYTCKECGKGCITLSQLTLHQRIHTG 650

Query: 294 TRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
            RPY+C +C  A++TN   + HL  HTG KPY C  C K     SSL  H R
Sbjct: 651 ERPYKCEECGKAFRTNSDFTVHLRMHTGEKPYKCNECGKAFRSSSSLTVHQR 702

Source: Pan paniscus

Species: Pan paniscus

Genus: Pan

Family: Hominidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|260795613|ref|XP_002592799.1| hypothetical protein BRAFLDRAFT_65381 [Branchiostoma floridae] gi|229278023|gb|EEN48810.1| hypothetical protein BRAFLDRAFT_65381 [Branchiostoma floridae]

 Score =  177 bits (448), Expect = 8e-42,   Method: Compositional matrix adjust.
 Identities = 122/384 (31%), Positives = 184/384 (47%), Gaps = 49/384 (12%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFT----------TYS-- 49
           H G K Y C +C + FN+ G+LK H R HTGEKP+ C  CS++F+          TY+  
Sbjct: 66  HTGEKPYMCEECSRQFNELGHLKRHMRTHTGEKPYGCEKCSKQFSQLGHLKAHMRTYTGE 125

Query: 50  -------QVRRSSNTSARNVLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGG 102
                  + RR S TS+   L    RK    S   S+RE  R       E +    +LGG
Sbjct: 126 TLQVKCNRSRRMSTTSSAKSLGDVERKAKRDSSVRSVREEKR---YKCEECNKQFSQLGG 182

Query: 103 I-LFIFTNLS----------------GALVNAFYFGSGGWWFKSKSSHKIY--LGH-KLH 142
           +   + T+                  G L +     +G   ++ +   K +  LGH  +H
Sbjct: 183 LKAHVRTHTGEKPYRCEECSRQFSQVGHLKSHMQTHTGEKPYRCEKCSKQFSQLGHLNIH 242

Query: 143 LKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVR 202
           ++ HTGEKP  CE CSK F   ++ K H+R H GE+P  C  E C+  F     ++KH+R
Sbjct: 243 MRSHTGEKPFRCEECSKQFSRMDTLKTHMRTHTGERPYRC--EECSRQFSHLGTLKKHMR 300

Query: 203 T-CHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQ 261
           T    KP    + C++C K +S  S+L KH++   G +P  C+ C K+F+  S++  H +
Sbjct: 301 THTGEKP----YRCEECSKQFSQLSNLKKHVRTHTGEKPYRCEECSKQFSQLSNLKKHVR 356

Query: 262 SIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTG 321
           +    + ++C +C K F  +  L  H   H   +PY+C +C   +     L  H+  HTG
Sbjct: 357 THTGEKPYRCEECSKQFSRLGHLKGHMRTHTGEKPYRCEECRRQFSLFHHLKNHMRTHTG 416

Query: 322 AKPYVCEICNKVLTHRSSLISHYR 345
            KPY CE C++  +  S L  H R
Sbjct: 417 EKPYRCEECSRQFSQLSDLKRHVR 440

Source: Branchiostoma floridae

Species: Branchiostoma floridae

Genus: Branchiostoma

Family: Branchiostomidae

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326667171|ref|XP_003198510.1| PREDICTED: zinc finger protein 850-like [Danio rerio]

 Score =  176 bits (445), Expect = 2e-41,   Method: Compositional matrix adjust.
 Identities = 118/350 (33%), Positives = 170/350 (48%), Gaps = 21/350 (6%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
           H G K Y C QC K+F+Q   L +H RIHTGEKPFT N C + F   S + +        
Sbjct: 256 HTGEKPYTCPQCGKSFSQSSYLNKHMRIHTGEKPFTSNQCGKNFYCSSNLNQHMRIHTGE 315

Query: 62  VLKLSTRKGTSRSISESIRERNRSPVIYVAESSPLILRLGGILFIFTNLSGAL-----VN 116
            L   T+ G S S S ++ +  R   I+  E      + G      +NL+  +       
Sbjct: 316 KLFTCTQCGKSFSNSTNLNQHMR---IHTGEKPFTCTQCGKSFSQSSNLNHHMRIHTGEK 372

Query: 117 AFYFGSGGWWFKSKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKG 176
            F     G  F   SS        LH+  HTGEKP TC  C K F  +     H+R H G
Sbjct: 373 PFTCSQCGKSFSQSSSLN------LHMMIHTGEKPFTCTQCGKSFSQSSILNIHMRNHTG 426

Query: 177 EKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARL 236
           EKP TC    C ++F +S ++ +H+R  H    +  F C +C K +S +++L +HM+   
Sbjct: 427 EKPFTCL--QCGKSFSQSTSLNQHMRI-HTGEKL--FTCTQCGKSFSNSANLNQHMRIHT 481

Query: 237 GRQPVSCDICHKEFTHPSSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDTR 295
           G +P +C  C K F+  S++  H + IH  E  F C++C K F     LN H  +H   +
Sbjct: 482 GEKPFTCTQCGKSFSQSSNLNIHMR-IHTGEKPFTCSQCGKSFSQSPYLNHHMRIHTGEK 540

Query: 296 PYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           P+ C QC  ++  + SL+ H+  HTG KP+ C  C K  +  S+L  H R
Sbjct: 541 PFTCSQCGKSFSQSSSLNLHMRIHTGEKPFTCTQCGKSFSQSSNLNIHMR 590

Source: Danio rerio

Species: Danio rerio

Genus: Danio

Family: Cyprinidae

Order: Cypriniformes

Class: Actinopterygii

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	345
ZFIN|ZDB-GENE-110913-144	429	si:dkeyp-85d8.5 "si:dkeyp-85d8	0.588	0.473	0.398	1.8e-54
ZFIN|ZDB-GENE-110913-126	346	si:dkeyp-4f2.5 "si:dkeyp-4f2.5	0.588	0.586	0.402	4.8e-54
ZFIN|ZDB-GENE-110914-67	357	si:ch211-64i20.4 "si:ch211-64i	0.568	0.549	0.405	6.1e-54
ZFIN|ZDB-GENE-110914-127	580	si:dkey-54f18.1 "si:dkey-54f18	0.568	0.337	0.410	9.9e-54
ZFIN|ZDB-GENE-110913-155	460	si:dkey-40n15.2 "si:dkey-40n15	0.568	0.426	0.391	9.9e-54
ZFIN|ZDB-GENE-110913-177	400	si:ch211-223a21.6 "si:ch211-22	0.568	0.49	0.405	1.6e-53
ZFIN|ZDB-GENE-110913-159	733	si:ch211-197f20.2 "si:ch211-19	0.568	0.267	0.400	2.5e-53
UNIPROTKB|F1MRQ1	560	F1MRQ1 "Uncharacterized protei	0.571	0.351	0.362	1.1e-52
UNIPROTKB|J9P3X3	703	LOC100684599 "Uncharacterized	0.568	0.278	0.391	1.1e-52
ZFIN|ZDB-GENE-110913-173	819	si:dkey-78k22.1 "si:dkey-78k22	0.571	0.240	0.386	1.3e-52

ZFIN|ZDB-GENE-110913-144 si:dkeyp-85d8.5 "si:dkeyp-85d8.5" [Danio rerio (taxid:7955)]

 Score = 429 (156.1 bits), Expect = 1.8e-54, Sum P(2) = 1.8e-54
 Identities = 86/216 (39%), Positives = 120/216 (55%)

Query:   133 HKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFV 192
             H  +L   LH++ HTGEKP TC  C K F  + S   H++ H GEKP TCT   C ++F 
Sbjct:   161 HSSFLN--LHMRIHTGEKPLTCPQCGKSFSKSSSLYKHMKIHTGEKPFTCT--QCGKSFY 216

Query:   193 ESWAMRKHVRTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEF 250
             +S  ++KH+R  H   KP    F C +C K ++C+S L KHM    G +P +C  C K F
Sbjct:   217 DSSYLKKHIRI-HTGEKP----FTCAQCGKSFNCSSHLKKHMMIHTGEKPFTCTQCGKSF 271

Query:   251 THPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTN 309
             +  SS LY    IH  E  F CT+C K F H   LN+H ++H   +P+ CPQC  ++  +
Sbjct:   272 SKSSS-LYRHMRIHTGEKPFTCTQCGKSFSHSSSLNQHIMIHTGEKPFTCPQCGKSFIHS 330

Query:   310 ISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
              +L+ H+  HTG KP+ C  C K  +  S L  H +
Sbjct:   331 SNLNLHMRIHTGEKPFTCSQCGKSFSTSSHLKQHMK 366

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-126 si:dkeyp-4f2.5 "si:dkeyp-4f2.5" [Danio rerio (taxid:7955)]

 Score = 425 (154.7 bits), Expect = 4.8e-54, Sum P(2) = 4.8e-54
 Identities = 87/216 (40%), Positives = 117/216 (54%)

Query:   133 HKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFV 192
             H  +L   LH++ HTGEKP TC  C K F  + S   H++ H GEKP TCT   C ++F 
Sbjct:   104 HSSFLN--LHMRIHTGEKPLTCPQCGKSFSKSSSLYKHMKIHTGEKPFTCT--QCGKSFY 159

Query:   193 ESWAMRKHVRTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEF 250
             +S  ++KH+R  H   KP    F C +C K ++C+S L KHM    G +P +C  C K F
Sbjct:   160 DSSYLKKHMRI-HTGEKP----FTCAQCGKSFNCSSHLKKHMMIHTGEKPFTCTQCGKSF 214

Query:   251 THPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTN 309
             +  SS LY    IH  E  F CT+C K F H   LN H  +H   +P+ CPQC  ++  +
Sbjct:   215 SKSSS-LYRHMRIHTGEKPFTCTQCGKSFSHSSSLNLHMRIHTGEKPFTCPQCGKSFIHS 273

Query:   310 ISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
               L  H+M HTG KP+ C  C K  +  S L  H +
Sbjct:   274 SHLKQHIMIHTGEKPFTCTQCGKSFSTSSHLKQHMK 309

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110914-67 si:ch211-64i20.4 "si:ch211-64i20.4" [Danio rerio (taxid:7955)]

 Score = 413 (150.4 bits), Expect = 6.1e-54, Sum P(2) = 6.1e-54
 Identities = 84/207 (40%), Positives = 112/207 (54%)

Query:   142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
             H+K HTGEKP TC  C K F    + K H+R H GEKP TCT   C  +F +S ++  H+
Sbjct:   128 HMKSHTGEKPFTCTQCGKSFGIQNTLKIHMRIHTGEKPFTCT--QCGRSFNQSSSLNLHM 185

Query:   202 RTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYH 259
                H   KP    F C +C K +S +S+  KHMK   G +P +C  C K F+ PS    H
Sbjct:   186 MI-HTGEKP----FTCTQCGKRFSQSSNFNKHMKIHSGEKPFTCHQCGKSFSIPSHFNLH 240

Query:   260 KQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK 318
              + IH  E +F CT+C K F H   LN H  +H   +P+ C QC  ++  + SL+ H+  
Sbjct:   241 MR-IHTGEKLFTCTQCGKSFSHSSNLNSHMRIHTGEKPFTCTQCGKSFSQSSSLNLHMRL 299

Query:   319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
             HTG KP+ C  C K  +  SSL  H R
Sbjct:   300 HTGEKPFTCTQCGKSFSQLSSLNIHMR 326

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110914-127 si:dkey-54f18.1 "si:dkey-54f18.1" [Danio rerio (taxid:7955)]

 Score = 425 (154.7 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
 Identities = 85/207 (41%), Positives = 115/207 (55%)

Query:   142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
             H++ HTGEKP TC LC K F  + S   H+R H GEKP TCT   C ++F +S ++ +H+
Sbjct:   131 HIRIHTGEKPITCTLCGKSFRQSSSLSKHMRTHTGEKPFTCT--QCGKSFRQSSSLYRHM 188

Query:   202 RTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYH 259
             R  H   KP    F C +C K +S +S+   HM+   G +P++C  C K F H SS LY 
Sbjct:   189 RI-HTGEKP----FTCTQCGKSFSQSSNFNLHMRIHTGEKPITCTQCGKSF-HQSSSLYK 242

Query:   260 KQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK 318
                IH  E  F CT+C K F  +  LNRH ++H   +P+ C QC  ++     L  H+M 
Sbjct:   243 HMRIHTGEKPFTCTQCGKSFSRLSHLNRHMMIHTGEKPFTCNQCGKSFSRLSHLIRHMMI 302

Query:   319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
             HTG KP+ C  C K  +  SSL  H R
Sbjct:   303 HTGEKPFTCSQCRKSFSILSSLYRHMR 329

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-155 si:dkey-40n15.2 "si:dkey-40n15.2" [Danio rerio (taxid:7955)]

 Score = 421 (153.3 bits), Expect = 9.9e-54, Sum P(2) = 9.9e-54
 Identities = 81/207 (39%), Positives = 115/207 (55%)

Query:   142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
             H++ HTGEKP TC  C K F+ + ++  H+R H GEKP TCT   C ++F ++ ++ KH+
Sbjct:   195 HMRIHTGEKPFTCTQCGKSFIQSSNFNLHMRIHTGEKPFTCT--QCGKSFRQASSLNKHM 252

Query:   202 RTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYH 259
             RT H   KP    F C +C K ++ +S L +HM+   G +P++C  C K F   SS LY 
Sbjct:   253 RT-HTGEKP----FTCTQCGKSFNSSSHLNQHMRIHTGEKPITCTQCGKSFRQSSS-LYK 306

Query:   260 KQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK 318
                IH  E  F CT+C K F+    LN+H  +H   +P+ C QC  ++  +  L  H+  
Sbjct:   307 HMRIHTGEKPFTCTQCGKSFRQASSLNKHMRIHTGEKPFTCTQCGKSFNCSSYLKQHMTI 366

Query:   319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
             HTG KP+ C  C K     SSL  H R
Sbjct:   367 HTGEKPFTCTQCGKSFRQASSLNIHMR 393

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-177 si:ch211-223a21.6 "si:ch211-223a21.6" [Danio rerio (taxid:7955)]

 Score = 420 (152.9 bits), Expect = 1.6e-53, Sum P(2) = 1.6e-53
 Identities = 84/207 (40%), Positives = 115/207 (55%)

Query:   142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
             H+K HTGEKP TC  C K F  +     H+R H GEKP TCT   C ++F +S  ++KH+
Sbjct:   140 HMKIHTGEKPLTCTHCGKSFNHSSFLNLHMRIHTGEKPFTCT--QCGKSFYDSSYLKKHM 197

Query:   202 RTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYH 259
             R  H   KP    F C +C K ++C+S L KHM    G +P +C  C K F+  SS LY 
Sbjct:   198 RI-HTGEKP----FTCAQCGKSFNCSSHLKKHMMIHTGEKPFTCTQCGKSFSKYSS-LYR 251

Query:   260 KQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK 318
                IH  E  F CT+C K F H   LN+H ++H   +P+ CPQC  ++  + +L+ H+  
Sbjct:   252 HMRIHTGEKPFTCTQCGKSFSHSSSLNQHIMIHTGEKPFTCPQCGKSFIHSSNLNLHMRI 311

Query:   319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
             HTG KP+ C  C K  +  S L  H +
Sbjct:   312 HTGEKPFTCSQCGKSFSTSSHLKQHMK 338

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

ZFIN|ZDB-GENE-110913-159 si:ch211-197f20.2 "si:ch211-197f20.2" [Danio rerio (taxid:7955)]

 Score = 423 (154.0 bits), Expect = 2.5e-53, Sum P(2) = 2.5e-53
 Identities = 83/207 (40%), Positives = 115/207 (55%)

Query:   142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
             H++ HTGEKP TC  C K F  +     H+R H GEKP+TCT   C ++F +S ++ +H+
Sbjct:   279 HMRTHTGEKPFTCTQCGKSFNRSSHLNQHIRIHTGEKPITCT--QCGKSFRQSSSLYRHM 336

Query:   202 RTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYH 259
             R  H   KP    F C +C K +S +S+   HM+   G +P++C  C K F H SS LY 
Sbjct:   337 RI-HTGEKP----FTCTQCGKSFSQSSNFNLHMRIHTGEKPITCTQCGKSF-HQSSSLYK 390

Query:   260 KQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK 318
                IH  E  F CT+C K F  +  LNRH ++H   +P+ C QC  ++     L  H+M 
Sbjct:   391 HMRIHTGEKPFTCTQCGKSFSRLSHLNRHMMIHTGEKPFTCTQCGKSFSRLSHLIRHMMI 450

Query:   319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
             HTG KP+ C  C K  ++ SSL  H R
Sbjct:   451 HTGEKPFTCSQCRKSFSNLSSLYRHMR 477

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1MRQ1 F1MRQ1 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 420 (152.9 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
 Identities = 75/207 (36%), Positives = 118/207 (57%)

Query:   141 LHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKH 200
             LH + H+GE+P+ C  C K F S  +   H + H GEKP +C    C +TF +   +++H
Sbjct:   356 LHQRVHSGERPYKCNDCEKSFKSQSNLNKHQKIHTGEKPFSCN--ECEKTFTQLVDLKRH 413

Query:   201 VRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHK 260
              +  H    +  + CD C+K + C S LT+H +   G +P  C++C K F H S+V+ H+
Sbjct:   414 -KQIHTGEKL--YSCDNCKKTFVCFSDLTRHRRTHTGERPYKCNVCEKTFKHQSNVIRHQ 470

Query:   261 QSIHNNEI----FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHL 316
             +S H+ E     F C  C+K F++   LNRH+ +H + +PY+C +C  A+  + +LS H+
Sbjct:   471 KS-HSEERPETPFSCDGCEKTFRYYSDLNRHKKIHTEEKPYKCSECQKAFNHSSNLSKHM 529

Query:   317 MKHTGAKPYVCEICNKVLTHRSSLISH 343
               HTG KP+VC+ C K  +  S L  H
Sbjct:   530 KIHTGEKPFVCDQCGKAFSLNSKLSRH 556

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|J9P3X3 LOC100684599 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 411 (149.7 bits), Expect = 1.1e-52, Sum P(2) = 1.1e-52
 Identities = 81/207 (39%), Positives = 116/207 (56%)

Query:   142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
             H + HTGEKP+ C+ C K F  + +   H R H GEKP  C+  +CT++F     + KH 
Sbjct:   394 HHRIHTGEKPYECDECGKTFSQSSNLILHQRIHTGEKPYPCS--DCTKSFSRRSDLVKHQ 451

Query:   202 RTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYH 259
             R  H   KP    + CD+C+K +S +S LTKH +   G +P  CD C K F+  S ++ H
Sbjct:   452 RI-HTGEKP----YACDQCKKSFSQSSDLTKHQRVHSGEKPYHCDHCEKAFSQSSDLILH 506

Query:   260 KQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK 318
              Q +H  E  + C +C K F     L +HQ +H   +PY+CP+C  A+    +L  H   
Sbjct:   507 -QRVHTGEKPYPCIQCSKSFSQNSDLIKHQRIHTGEKPYKCPECGKAFSQCSALILHQRI 565

Query:   319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
             HTG KPY C++C+K  + RS LI+H R
Sbjct:   566 HTGEKPYSCDLCDKSFSRRSDLINHQR 592

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

ZFIN|ZDB-GENE-110913-173 si:dkey-78k22.1 "si:dkey-78k22.1" [Danio rerio (taxid:7955)]

 Score = 420 (152.9 bits), Expect = 1.3e-52, Sum P(2) = 1.3e-52
 Identities = 80/207 (38%), Positives = 115/207 (55%)

Query:   142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
             H++ HTGEKP TC  C K F  +     H+R H GEKP+TCT   C ++F +S ++ KH 
Sbjct:   576 HMRIHTGEKPFTCTQCGKSFNRSSHLNQHIRIHTGEKPITCT--QCGKSFRQSSSLYKHH 633

Query:   202 RTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYH 259
                H   KP    F C +CEK ++C+S+L  HM+   G +P +C  C K F   S++  H
Sbjct:   634 MRIHTGEKP----FTCTQCEKSFNCSSNLNTHMRIHTGEKPFTCTQCGKSFNFSSNLHQH 689

Query:   260 KQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK 318
              + IH  E  F C +C K F H+  LNRH ++H   +P++C QC  ++  +  L  H+  
Sbjct:   690 MR-IHTGEKPFTCPQCGKSFFHLSHLNRHMMIHTREKPFKCTQCGKSFNRSSDLHQHIRI 748

Query:   319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
             HTG KP+ C  C K     S+L +H R
Sbjct:   749 HTGEKPFTCTQCEKSFNCSSNLYTHMR 775

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	345
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	3e-04

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 37.4 bits (87), Expect = 3e-04
 Identities = 13/26 (50%), Positives = 19/26 (73%)

Query: 22 NLKEHFRIHTGEKPFTCNICSRKFTT 47
          NL+ H R HTGEKP+ C +C + F++
Sbjct: 1  NLRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	345
KOG1074|consensus	958		99.97
KOG2462|consensus	279		99.96
KOG1074|consensus	958		99.95
KOG2462|consensus	279		99.94
KOG3608|consensus	467		99.94
KOG3623|consensus	1007		99.91
KOG3608|consensus	467		99.91
KOG3623|consensus	1007		99.87
KOG3576|consensus	267		99.71
KOG3576|consensus	267		99.59
PLN03086	567	PRLI-interacting factor K; Provisional	99.34
PLN03086	567	PRLI-interacting factor K; Provisional	99.28
PHA00733	128	hypothetical protein	99.22
PHA00733	128	hypothetical protein	99.21
PHA02768	55	hypothetical protein; Provisional	99.17
PHA02768	55	hypothetical protein; Provisional	99.0
KOG3993|consensus	500		98.87
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.87
KOG3993|consensus	500		98.86
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.76
PHA00616	44	hypothetical protein	98.71
PHA00616	44	hypothetical protein	98.58
PHA00732	79	hypothetical protein	98.5
PHA00732	79	hypothetical protein	98.5
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.24
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.23
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.11
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.99
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.93
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.81
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.81
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.69
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.65
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.59
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.55
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.5
KOG2785|consensus	390		97.33
smart00355	26	ZnF_C2H2 zinc finger.	97.1
KOG2231|consensus	669		97.04
smart00355	26	ZnF_C2H2 zinc finger.	97.03
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.91
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.89
PRK04860	160	hypothetical protein; Provisional	96.89
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.89
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.87
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.82
COG5048	467	FOG: Zn-finger [General function prediction only]	96.81
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.8
PRK04860	160	hypothetical protein; Provisional	96.73
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.63
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.59
KOG2482|consensus	423		96.51
KOG2785|consensus	390		96.47
KOG1146|consensus	1406		96.15
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.98
KOG2231|consensus	669		95.94
KOG2482|consensus	423		95.92
COG5236	493	Uncharacterized conserved protein, contains RING Z	95.57
KOG1146|consensus	1406		95.4
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.95
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.83
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.72
KOG4173|consensus	253		94.46
COG5048	467	FOG: Zn-finger [General function prediction only]	94.39
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	94.18
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	94.13
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.01
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	93.74
KOG4173|consensus	253		93.71
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	92.92
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	91.98
KOG2893|consensus	341		91.9
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	91.04
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	90.78
COG4049	65	Uncharacterized protein containing archaeal-type C	90.0
KOG2186|consensus	276		89.94
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	89.73
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	89.69
KOG2893|consensus	341		89.51
COG4049	65	Uncharacterized protein containing archaeal-type C	88.59
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	88.26
PRK06266	178	transcription initiation factor E subunit alpha; V	86.51
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	86.16
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	84.91
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	84.62
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	84.48
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	83.96
KOG2186|consensus	276		83.78
smart00531	147	TFIIE Transcription initiation factor IIE.	83.57
KOG2807|consensus	378		83.51
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	83.4
COG1592	166	Rubrerythrin [Energy production and conversion]	82.79
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	82.48
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	82.03
PF03604	32	DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa	81.77
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	81.3
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	81.0
PF13878	41	zf-C2H2_3: zinc-finger of acetyl-transferase ESCO	80.53
TIGR02605	52	CxxC_CxxC_SSSS putative regulatory protein, FmdB f	80.46
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	80.39
PHA00626	59	hypothetical protein	80.23

>KOG1074|consensus

Probab=99.97  E-value=3.3e-32  Score=241.67  Aligned_cols=113  Identities=27%  Similarity=0.620  Sum_probs=96.9

Q ss_pred             CCcccccccccccCCHHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCCCCC-CccccC---CCcccccC
Q psy8793         149 EKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTV-NRFPCD---KCEKVYSC  224 (345)
Q Consensus       149 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~-~~~~C~---~C~~~f~~  224 (345)
                      ..|..|-+|-++..-+..|+.|++.|.+++||+|.  .|++.|+++.+|+.|+-.|-..+.. ..+.|+   +|.+.|.+
T Consensus       603 TdPNqCiiC~rVlSC~saLqmHyrtHtGERPFkCK--iCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn  680 (958)
T KOG1074|consen  603 TDPNQCIICLRVLSCPSALQMHYRTHTGERPFKCK--ICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTN  680 (958)
T ss_pred             CCccceeeeeecccchhhhhhhhhcccCcCccccc--cccchhccccchhhcccccccCccccccccCCchhhhcccccc
Confidence            34689999999999999999999999999999998  6999999999999999998776544 458899   99999999


Q ss_pred             hhhHHHHHHHhcCCC-------------CccCccccccCCChhHHHHHhhhh
Q psy8793         225 ASSLTKHMKARLGRQ-------------PVSCDICHKEFTHPSSVLYHKQSI  263 (345)
Q Consensus       225 ~~~l~~H~~~~~~~~-------------~~~C~~C~~~f~~~~~l~~H~~~~  263 (345)
                      .-.+..|+++|.+..             .-.|+.|.+.|.....+..++..+
T Consensus       681 ~V~lpQhIriH~~~~~s~g~~a~e~~~~adq~~~~qk~~~~a~~f~~~~se~  732 (958)
T KOG1074|consen  681 AVTLPQHIRIHLGGQISNGGTAAEGILAADQCSSCQKTFSDARSFSQQISEQ  732 (958)
T ss_pred             cccccceEEeecCCCCCCCcccccccchhcccchhhhcccccccchhhhhcc
Confidence            999999999987321             135888999887777777776655

>KOG2462|consensus

Probab=99.96  E-value=1.1e-30  Score=205.16  Aligned_cols=132  Identities=29%  Similarity=0.599  Sum_probs=116.3

Q ss_pred             CccccCCCcccccChhhHHHHHHHhcC---CCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHH
Q psy8793         211 NRFPCDKCEKVYSCASSLTKHMKARLG---RQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRH  287 (345)
Q Consensus       211 ~~~~C~~C~~~f~~~~~l~~H~~~~~~---~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H  287 (345)
                      ..|+|+.|++.+++...|-.|...|..   .+.+.|..|+++|.+...|.+|+++|.  -++.|++|||.|...=.|+-|
T Consensus       129 ~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGH  206 (279)
T KOG2462|consen  129 PRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGH  206 (279)
T ss_pred             CceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcc
Confidence            458899999999988888888888864   456889999999999999999998887  568899999999888889999


Q ss_pred             HHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhhhcc
Q psy8793         288 QLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHY  344 (345)
Q Consensus       288 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  344 (345)
                      +|+|+|+|||.|+.|++.|++.++|+.||++|.+.++|.|..|+|+|...+-|.+|.
T Consensus       207 iRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~  263 (279)
T KOG2462|consen  207 IRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHS  263 (279)
T ss_pred             cccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhh
Confidence            999999999999999999999999999999999999999999999999999998885

>KOG1074|consensus

Probab=99.95  E-value=1.6e-29  Score=224.65  Aligned_cols=79  Identities=30%  Similarity=0.623  Sum_probs=73.0

Q ss_pred             cccCCCcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcCC----ceeecC---cCccccCChHHHH
Q psy8793         213 FPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNN----EIFKCT---KCDKVFQHIQLLN  285 (345)
Q Consensus       213 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~----~~~~C~---~C~~~f~~~~~l~  285 (345)
                      ..|=+|.++++-...|+.|.++|.|++||+|.+|++.|.++.+|+.|+.+|...    -+|.|+   +|-+.|...-.|.
T Consensus       606 NqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  606 NQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             cceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            789999999999999999999999999999999999999999999999988764    457899   8999999999999


Q ss_pred             HHHHHh
Q psy8793         286 RHQLVH  291 (345)
Q Consensus       286 ~H~~~h  291 (345)
                      .|+++|
T Consensus       686 QhIriH  691 (958)
T KOG1074|consen  686 QHIRIH  691 (958)
T ss_pred             ceEEee
Confidence            999988

>KOG2462|consensus

Probab=99.94  E-value=6.3e-28  Score=189.68  Aligned_cols=130  Identities=27%  Similarity=0.572  Sum_probs=113.1

Q ss_pred             ccCccccchHhHHHHhhhhcCCCCCCccccCCCcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcC
Q psy8793         186 NCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHN  265 (345)
Q Consensus       186 ~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~  265 (345)
                      .|++.+.+...|.+|.+.|-.....+-+.|..|++++.+-..|..|+++|.  -+++|.+||+.|..++.|+-|++.|+|
T Consensus       135 eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQGHiRTHTG  212 (279)
T KOG2462|consen  135 ECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQGHIRTHTG  212 (279)
T ss_pred             ccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhcccccccC
Confidence            455555555555555555544444466999999999999999999999994  579999999999999999999999999


Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhh
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLM  317 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  317 (345)
                      ++||.|+.|++.|.+.++|+.||++|.+.|+|+|+.|+++|+..+-|.+|.-
T Consensus       213 EKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~E  264 (279)
T KOG2462|consen  213 EKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSE  264 (279)
T ss_pred             CCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhh
Confidence            9999999999999999999999999999999999999999999999999964

>KOG3608|consensus

Probab=99.94  E-value=9.3e-27  Score=187.80  Aligned_cols=188  Identities=27%  Similarity=0.541  Sum_probs=163.9

Q ss_pred             ccccc--cccccCCHHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCCCCCCccccCCCcccccChhhHH
Q psy8793         152 HTCEL--CSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLT  229 (345)
Q Consensus       152 ~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~  229 (345)
                      +.|.+  |...+.+++.|++|++.|.+++-..|+  .|+..|.+...|-.|++....-. ..+|.|..|-+.|.+...|.
T Consensus       178 ~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp--~Cg~~F~~~tkl~DH~rRqt~l~-~n~fqC~~C~KrFaTeklL~  254 (467)
T KOG3608|consen  178 TMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACP--HCGELFRTKTKLFDHLRRQTELN-TNSFQCAQCFKRFATEKLLK  254 (467)
T ss_pred             eeccchhhhhhhccHHHHHHHHHhcCCCeEEecc--hHHHHhccccHHHHHHHhhhhhc-CCchHHHHHHHHHhHHHHHH
Confidence            56776  999999999999999999999999997  79999999999999977653322 25799999999999999999


Q ss_pred             HHHHHhcCCCCccCccccccCCChhHHHHHhh-hhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC--Ccccc
Q psy8793         230 KHMKARLGRQPVSCDICHKEFTHPSSVLYHKQ-SIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMAY  306 (345)
Q Consensus       230 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f  306 (345)
                      .|+..|..  .|+|+.|+.+...++.|..|++ +|..++||+|..|++.|...++|++|..+|. +..|+|..  |.++|
T Consensus       255 ~Hv~rHvn--~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~  331 (467)
T KOG3608|consen  255 SHVVRHVN--CYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSV  331 (467)
T ss_pred             HHHHHhhh--cccccccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHH
Confidence            99999954  5999999999999999999987 5667899999999999999999999999888 66799966  99999


Q ss_pred             CChHHHHHHhhhhc-CCC--ccccccchhhccccchhhhccC
Q psy8793         307 KTNISLSAHLMKHT-GAK--PYVCEICNKVLTHRSSLISHYR  345 (345)
Q Consensus       307 ~~~~~l~~H~~~h~-~~~--~~~C~~C~~~f~~~~~l~~H~r  345 (345)
                      .+...|++|++.++ |..  +|.|-.|++.|++..+|-.|++
T Consensus       332 r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~~L~~HL~  373 (467)
T KOG3608|consen  332 RTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGKSLSAHLM  373 (467)
T ss_pred             HHHHHHHHHHHHhccCCCCCceeeecchhhhccchhHHHHHH
Confidence            99999999988544 554  4999999999999999998874

>KOG3623|consensus

Probab=99.91  E-value=2.7e-25  Score=194.92  Aligned_cols=108  Identities=26%  Similarity=0.597  Sum_probs=96.1

Q ss_pred             ccccccccccCCHHHHHHHHhhhcC--CCCccccccccCccccchHhHHHHhhhhcCCC----------CCCccccCCCc
Q psy8793         152 HTCELCSKGFLSAESYKCHLRRHKG--EKPVTCTFENCTETFVESWAMRKHVRTCHNKP----------TVNRFPCDKCE  219 (345)
Q Consensus       152 ~~C~~C~~~f~~~~~l~~H~~~~~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~----------~~~~~~C~~C~  219 (345)
                      ..|++|++.+.....|++|++.-+.  +..|.|.  .|.++|.++..|.+|+..|...+          ..+.|+|..|+
T Consensus       211 ltcpycdrgykrltslkeHikyrhekne~nfsC~--lCsytFAyRtQLErhm~~hkpg~dqa~sltqsa~lRKFKCtECg  288 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHEKNEPNFSCM--LCSYTFAYRTQLERHMQLHKPGGDQAISLTQSALLRKFKCTECG  288 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHhhCCCCCcch--hhhhhhhhHHHHHHHHHhhcCCCcccccccchhhhccccccccc
Confidence            6899999999999999999986443  4568887  69999999999999999986432          24679999999


Q ss_pred             ccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhh
Q psy8793         220 KVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQ  261 (345)
Q Consensus       220 ~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~  261 (345)
                      +.|+-+..|+.|+|+|.|++||.|+-|.+.|.....+..|+.
T Consensus       289 KAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmS  330 (1007)
T KOG3623|consen  289 KAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMS  330 (1007)
T ss_pred             hhhhhHHHHHhhheeecCCCCcCCcccccccccCCccccccc
Confidence            999999999999999999999999999999999999888865

>KOG3608|consensus

Probab=99.91  E-value=6e-25  Score=177.42  Aligned_cols=189  Identities=23%  Similarity=0.541  Sum_probs=171.7

Q ss_pred             cccccc--cccccCCHHHHHHHHhhhcC------------C-CCccccccccCccccchHhHHHHhhhhcCCCCCCcccc
Q psy8793         151 PHTCEL--CSKGFLSAESYKCHLRRHKG------------E-KPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPC  215 (345)
Q Consensus       151 ~~~C~~--C~~~f~~~~~l~~H~~~~~~------------~-~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C  215 (345)
                      .+.|.+  |+..|.+..+|..|+..|.-            + .-+.|.|-.|...+.++..|+.|++.|.++   +...|
T Consensus       134 ~f~C~WedCe~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~e---KvvAC  210 (467)
T KOG3608|consen  134 NFRCGWEDCEREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNE---KVVAC  210 (467)
T ss_pred             hhccChhhcCCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCC---eEEec
Confidence            377765  99999999999999876632            1 236899999999999999999999999998   67899


Q ss_pred             CCCcccccChhhHHHHHHHhc--CCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHH-hC
Q psy8793         216 DKCEKVYSCASSLTKHMKARL--GRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLV-HM  292 (345)
Q Consensus       216 ~~C~~~f~~~~~l~~H~~~~~--~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h~  292 (345)
                      +.||..|++...|.+|++...  ..++|.|..|.+.|.+...|.+|+..|-.-  |+|+.|+.+....++|..||+. |.
T Consensus       211 p~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~--ykCplCdmtc~~~ssL~~H~r~rHs  288 (467)
T KOG3608|consen  211 PHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNC--YKCPLCDMTCSSASSLTTHIRYRHS  288 (467)
T ss_pred             chHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhc--ccccccccCCCChHHHHHHHHhhhc
Confidence            999999999999999988654  467899999999999999999999988765  9999999999999999999996 99


Q ss_pred             CCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc--chhhccccchhhhccC
Q psy8793         293 DTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI--CNKVLTHRSSLISHYR  345 (345)
Q Consensus       293 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~r  345 (345)
                      ..+||+|..|++.|.+.+.|.+|+..|. +..|.|..  |.++|.+...|++|++
T Consensus       289 ~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~  342 (467)
T KOG3608|consen  289 KDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFL  342 (467)
T ss_pred             cCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHH
Confidence            9999999999999999999999999998 67899977  9999999999999985

>KOG3623|consensus

Probab=99.87  E-value=4.8e-23  Score=180.89  Aligned_cols=76  Identities=39%  Similarity=0.800  Sum_probs=74.4

Q ss_pred             eecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhhhcc
Q psy8793         269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHY  344 (345)
Q Consensus       269 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  344 (345)
                      |-|+.|+|.|...+.|.+|.=.|+|.+||+|.+|.+.|..+-.|..|++.|.|+|||.|..|+|.|+.....-.||
T Consensus       895 yaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  895 YACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             chHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            9999999999999999999999999999999999999999999999999999999999999999999999888887

>KOG3576|consensus

Probab=99.71  E-value=1.2e-18  Score=130.51  Aligned_cols=110  Identities=23%  Similarity=0.445  Sum_probs=61.6

Q ss_pred             ccccCCCcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHh
Q psy8793         212 RFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                      .|.|.+|++.|....-|.+|++-|...+.+-|..|++.|...-.|.+|++.|++-+||+|..|+++|...-.|.+|++.-
T Consensus       117 ~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~kv  196 (267)
T KOG3576|consen  117 SFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLKKV  196 (267)
T ss_pred             eeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHHHH
Confidence            35566666666655555666665555555555555555555555555555555555555555555555555555555432


Q ss_pred             CC-----------CCCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         292 MD-----------TRPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       292 ~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      +|           .+-|.|++||.+-.....+..|++.|+.
T Consensus       197 hgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp  237 (267)
T KOG3576|consen  197 HGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHP  237 (267)
T ss_pred             cCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCC
Confidence            22           2335555555555555555555555544

>KOG3576|consensus

Probab=99.59  E-value=3.4e-16  Score=117.43  Aligned_cols=107  Identities=32%  Similarity=0.566  Sum_probs=75.2

Q ss_pred             CCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhh
Q psy8793         238 RQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLM  317 (345)
Q Consensus       238 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  317 (345)
                      ...|.|.+|++.|....-|.+|++-|.+-+.|-|..||+.|.+.-+|++|+++|+|.+||+|..|++.|+..-.|..|.+
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl~  194 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHLK  194 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHHH
Confidence            44567777777777777777777777777777777777777777777777777777777777777777777777777766


Q ss_pred             hhcC-----------CCccccccchhhccccchhhhcc
Q psy8793         318 KHTG-----------AKPYVCEICNKVLTHRSSLISHY  344 (345)
Q Consensus       318 ~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~  344 (345)
                      .-+|           ++.|.|+.||++-.....+..|+
T Consensus       195 kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~  232 (267)
T KOG3576|consen  195 KVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHL  232 (267)
T ss_pred             HHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHH
Confidence            4333           34577777777766666555554

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.34  E-value=1.7e-12  Score=115.88  Aligned_cols=141  Identities=22%  Similarity=0.474  Sum_probs=102.0

Q ss_pred             ccccccccCccccchHhHHHHhhhhcCCCCCCccccCC--CcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHH
Q psy8793         180 VTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDK--CEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVL  257 (345)
Q Consensus       180 ~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~  257 (345)
                      ..|.  +|.+..... .|..|.....-    ....|+.  |+..|. ...+..|         +.|+.|++.|. ...|.
T Consensus       408 V~C~--NC~~~i~l~-~l~lHe~~C~r----~~V~Cp~~~Cg~v~~-r~el~~H---------~~C~~Cgk~f~-~s~Le  469 (567)
T PLN03086        408 VECR--NCKHYIPSR-SIALHEAYCSR----HNVVCPHDGCGIVLR-VEEAKNH---------VHCEKCGQAFQ-QGEME  469 (567)
T ss_pred             EECC--CCCCccchh-HHHHHHhhCCC----cceeCCcccccceee-ccccccC---------ccCCCCCCccc-hHHHH
Confidence            4555  566655543 34455544322    2246774  888884 3233333         58999999885 67889


Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccC----------ChHHHHHHhhhhcCCCcccc
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYK----------TNISLSAHLMKHTGAKPYVC  327 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~~C  327 (345)
                      .|+..+|  .++.|+ |++.+ ....|..|+.+|...+++.|+.|++.|.          ..+.|..|+..+ |.+++.|
T Consensus       470 kH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C  544 (567)
T PLN03086        470 KHMKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPC  544 (567)
T ss_pred             HHHHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEc
Confidence            9999886  789999 99755 6688999999999999999999999885          245899998886 8899999


Q ss_pred             ccchhhccccchhhhcc
Q psy8793         328 EICNKVLTHRSSLISHY  344 (345)
Q Consensus       328 ~~C~~~f~~~~~l~~H~  344 (345)
                      ..|++.+..+ +|..|+
T Consensus       545 ~~Cgk~Vrlr-dm~~H~  560 (567)
T PLN03086        545 DSCGRSVMLK-EMDIHQ  560 (567)
T ss_pred             cccCCeeeeh-hHHHHH
Confidence            9999886554 566664

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.28  E-value=1.5e-11  Score=109.94  Aligned_cols=145  Identities=20%  Similarity=0.450  Sum_probs=114.2

Q ss_pred             ccccccccccCCHHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCCCCCCccccCCCcccccChhhHHHH
Q psy8793         152 HTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKH  231 (345)
Q Consensus       152 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  231 (345)
                      ..|+.|....... .|..|..... -....|+-..|+..|. +..+..|            +.|+.|++.|. ...|..|
T Consensus       408 V~C~NC~~~i~l~-~l~lHe~~C~-r~~V~Cp~~~Cg~v~~-r~el~~H------------~~C~~Cgk~f~-~s~LekH  471 (567)
T PLN03086        408 VECRNCKHYIPSR-SIALHEAYCS-RHNVVCPHDGCGIVLR-VEEAKNH------------VHCEKCGQAFQ-QGEMEKH  471 (567)
T ss_pred             EECCCCCCccchh-HHHHHHhhCC-CcceeCCcccccceee-ccccccC------------ccCCCCCCccc-hHHHHHH
Confidence            4799999886544 5678885433 3446676335999884 3333333            68999999996 6789999


Q ss_pred             HHHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccC----------ChHHHHHHHHHhCCCCCcCCCC
Q psy8793         232 MKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQ----------HIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       232 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~----------~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      +.+++  .++.|+ |+..+ .+..|..|+..+.+.+++.|++|++.|.          ..+.|..|.... +.+++.|..
T Consensus       472 ~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~  546 (567)
T PLN03086        472 MKVFH--EPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDS  546 (567)
T ss_pred             HHhcC--CCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccc
Confidence            99985  789999 99755 6789999999999999999999999995          245899998885 889999999


Q ss_pred             CccccCChHHHHHHhhh
Q psy8793         302 CPMAYKTNISLSAHLMK  318 (345)
Q Consensus       302 C~~~f~~~~~l~~H~~~  318 (345)
                      ||+.+. ...|..|+..
T Consensus       547 Cgk~Vr-lrdm~~H~~~  562 (567)
T PLN03086        547 CGRSVM-LKEMDIHQIA  562 (567)
T ss_pred             cCCeee-ehhHHHHHHH
Confidence            998885 4778888664

>PHA00733 hypothetical protein

Probab=99.22  E-value=1.3e-11  Score=89.84  Aligned_cols=83  Identities=14%  Similarity=0.225  Sum_probs=59.4

Q ss_pred             CCCccCccccccCCChhHHHHH--h---hhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHH
Q psy8793         238 RQPVSCDICHKEFTHPSSVLYH--K---QSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISL  312 (345)
Q Consensus       238 ~~~~~C~~C~~~f~~~~~l~~H--~---~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  312 (345)
                      .+++.|.+|...|.++..|..+  +   ..+++.+||.|+.|++.|.+.+.|..|++.|  ..+|.|+.|++.|.....|
T Consensus        38 ~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~~sL  115 (128)
T PHA00733         38 QKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNTDST  115 (128)
T ss_pred             hhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCHHHH
Confidence            3456666666666555555444  1   2334577888888888888888888888876  3568888888888888888


Q ss_pred             HHHhhhhcCC
Q psy8793         313 SAHLMKHTGA  322 (345)
Q Consensus       313 ~~H~~~h~~~  322 (345)
                      ..|+...++.
T Consensus       116 ~~H~~~~h~~  125 (128)
T PHA00733        116 LDHVCKKHNI  125 (128)
T ss_pred             HHHHHHhcCc
Confidence            8888876653

>PHA00733 hypothetical protein

Probab=99.21  E-value=5.6e-12  Score=91.79  Aligned_cols=91  Identities=20%  Similarity=0.382  Sum_probs=73.8

Q ss_pred             hhHHHHHhhhhcCCceeecCcCccccCChHHHHHH--HH---HhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccc
Q psy8793         253 PSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRH--QL---VHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC  327 (345)
Q Consensus       253 ~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H--~~---~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  327 (345)
                      ...|..+-..-...+++.|.+|...|.....|..|  +.   .+++.+||.|+.|++.|...+.|..|++.|  ..+|.|
T Consensus        25 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C  102 (128)
T PHA00733         25 LEELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVC  102 (128)
T ss_pred             HHHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccC
Confidence            44455544444456789999999999888777766  22   245588999999999999999999999977  357999


Q ss_pred             ccchhhccccchhhhccC
Q psy8793         328 EICNKVLTHRSSLISHYR  345 (345)
Q Consensus       328 ~~C~~~f~~~~~l~~H~r  345 (345)
                      ..|+++|.....|.+|++
T Consensus       103 ~~CgK~F~~~~sL~~H~~  120 (128)
T PHA00733        103 PVCGKEFRNTDSTLDHVC  120 (128)
T ss_pred             CCCCCccCCHHHHHHHHH
Confidence            999999999999999974

>PHA02768 hypothetical protein; Provisional

Probab=99.17  E-value=1.3e-11  Score=73.32  Aligned_cols=44  Identities=27%  Similarity=0.539  Sum_probs=37.2

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhh
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLI  341 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  341 (345)
                      .|.|+.||+.|+..++|..|+++|+  ++|+|..|+++|.+.+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            5788888888888888888888888  6888888888888887775

>PHA02768 hypothetical protein; Provisional

Probab=99.00  E-value=1.9e-10  Score=68.41  Aligned_cols=43  Identities=12%  Similarity=0.254  Sum_probs=38.8

Q ss_pred             eeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHH
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISL  312 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  312 (345)
                      -|+|+.||+.|...+.|..|+++|+  ++|+|..|++.|...+.|
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            3899999999999999999999998  689999999999987766

>KOG3993|consensus

Probab=98.87  E-value=3.1e-10  Score=95.17  Aligned_cols=77  Identities=22%  Similarity=0.341  Sum_probs=52.9

Q ss_pred             eeecCcCccccCChHHHHHHHHHhCCC----------------------------------------------CCcCCCC
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVHMDT----------------------------------------------RPYQCPQ  301 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h~~~----------------------------------------------~~~~C~~  301 (345)
                      .|.|..|++.|...+-|+.|+.+|...                                              ....|++
T Consensus       356 i~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a~sael~~pp~  435 (500)
T KOG3993|consen  356 IFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVAGSAELELPPY  435 (500)
T ss_pred             eeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeeeccccccCCCC
Confidence            588999999999999999997776320                                              1145677


Q ss_pred             CccccCChHHHHHHhhhhcCCCccccccchhhccccchhhhcc
Q psy8793         302 CPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHY  344 (345)
Q Consensus       302 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  344 (345)
                      |+..++.+..--.+.+.=..+..|.|.+|.-+|.....|.+|+
T Consensus       436 ~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhi  478 (500)
T KOG3993|consen  436 DGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHI  478 (500)
T ss_pred             CCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHh
Confidence            7766665554333333333345588888888888888888775

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.87  E-value=1.1e-09  Score=55.73  Aligned_cols=25  Identities=44%  Similarity=0.949  Sum_probs=15.9

Q ss_pred             HHHHHhhhhcCCCccccccchhhcc
Q psy8793         311 SLSAHLMKHTGAKPYVCEICNKVLT  335 (345)
Q Consensus       311 ~l~~H~~~h~~~~~~~C~~C~~~f~  335 (345)
                      +|.+|+++|+|++||.|+.|+++|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3566666666666666666666664

...

>KOG3993|consensus

Probab=98.86  E-value=3.4e-10  Score=94.97  Aligned_cols=59  Identities=14%  Similarity=0.286  Sum_probs=48.4

Q ss_pred             CccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhcccccccccccccc
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARNVLKL   65 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~   65 (345)
                      -|-|.+|...|.+...|.+|.-.--...-|+|+.|+|.|+--.+|..|.+=|.+.....
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa  325 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAA  325 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhh
Confidence            48999999999999999999543222234999999999999999999999887664443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.76  E-value=4.1e-09  Score=53.58  Aligned_cols=25  Identities=36%  Similarity=0.879  Sum_probs=19.9

Q ss_pred             HHHHHHHHhCCCCCcCCCCCccccC
Q psy8793         283 LLNRHQLVHMDTRPYQCPQCPMAYK  307 (345)
Q Consensus       283 ~l~~H~~~h~~~~~~~C~~C~~~f~  307 (345)
                      +|.+|+++|++++||.|++|+++|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            4777888888888888888888875

...

>PHA00616 hypothetical protein

Probab=98.71  E-value=5.5e-09  Score=59.00  Aligned_cols=33  Identities=21%  Similarity=0.433  Sum_probs=20.9

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      ||+|+.||+.|..++.|..|++.|+|++++.|+
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~   33 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLE   33 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCcccee
Confidence            456666666666666666666666666666653

>PHA00616 hypothetical protein

Probab=98.58  E-value=2.2e-08  Score=56.61  Aligned_cols=38  Identities=13%  Similarity=0.332  Sum_probs=32.3

Q ss_pred             eeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccc
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMA  305 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  305 (345)
                      ||+|+.||+.|...++|.+|++.|++++++.|++=-..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~y~~   38 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEYFYIY   38 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeEEEEE
Confidence            58999999999999999999999999999888754433

>PHA00732 hypothetical protein

Probab=98.50  E-value=8.9e-08  Score=63.04  Aligned_cols=48  Identities=27%  Similarity=0.588  Sum_probs=35.9

Q ss_pred             eeecCcCccccCChHHHHHHHHH-hCCCCCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLV-HMDTRPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      ||.|+.|++.|.+.+.|..|++. |.+   +.|+.|++.|.   .|..|+..+.+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~---~l~~H~~~~~~   49 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYR---RLNQHFYSQYD   49 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeC---ChhhhhcccCC
Confidence            47788888888888888888874 543   57888888886   47778766554

>PHA00732 hypothetical protein

Probab=98.50  E-value=8.9e-08  Score=63.04  Aligned_cols=43  Identities=33%  Similarity=0.678  Sum_probs=37.2

Q ss_pred             CcCCCCCccccCChHHHHHHhhh-hcCCCccccccchhhccccchhhhcc
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMK-HTGAKPYVCEICNKVLTHRSSLISHY  344 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~  344 (345)
                      ||.|..|++.|...+.|+.|++. |.   ++.|+.|+++|.   .|..|+
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~   44 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHF   44 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhh
Confidence            68999999999999999999985 65   368999999998   477775

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.24  E-value=2e-06  Score=52.61  Aligned_cols=50  Identities=26%  Similarity=0.365  Sum_probs=33.5

Q ss_pred             eeecCcCccccCChHHHHHHHHH-hCCC-CCcCCCCCccccCChHHHHHHhhhhc
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLV-HMDT-RPYQCPQCPMAYKTNISLSAHLMKHT  320 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~  320 (345)
                      .|.||+|++ ..+...|..|+.. |..+ +.+.||+|...+.  .+|..|+..++
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            377888888 4456778888665 4443 4577888887654  47777877554

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.23  E-value=5.2e-07  Score=55.17  Aligned_cols=51  Identities=33%  Similarity=0.587  Sum_probs=40.7

Q ss_pred             CccCCCCCCCCCCCchhHHHHh-hhcCC-CCccCCcCCccccchhhhccccccccc
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFR-IHTGE-KPFTCNICSRKFTTYSQVRRSSNTSAR   60 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (345)
                      .|+|++|++ ..+...|..|+. .|..+ +.+.||+|...+.  .+|..||...|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            589999999 566789999965 56654 4699999998755  499999987663

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.11  E-value=2.8e-06  Score=41.89  Aligned_cols=23  Identities=39%  Similarity=0.725  Sum_probs=15.2

Q ss_pred             eecCcCccccCChHHHHHHHHHh
Q psy8793         269 FKCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       269 ~~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                      |.|+.|++.|.+.+.|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56666666666666666666653

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.99  E-value=3.3e-06  Score=68.78  Aligned_cols=55  Identities=25%  Similarity=0.684  Sum_probs=47.2

Q ss_pred             CCCCccCCC--CCCCCCCCchhHHHHh-hhc------------------CCCCccCCcCCccccchhhhccccccc
Q psy8793           4 GIKQYQCSQ--CPKAFNQKGNLKEHFR-IHT------------------GEKPFTCNICSRKFTTYSQVRRSSNTS   58 (345)
Q Consensus         4 ~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~------------------~~~~~~C~~C~~~f~~~~~l~~H~~~~   58 (345)
                      ++|||+|++  |++.|+++..|+.|+. -|.                  +++||.|++|+|+|.+...|+.|....
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~Hs  421 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRKHS  421 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccccc
Confidence            569999987  9999999999999965 451                  348899999999999999999998653

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.93  E-value=4e-06  Score=41.31  Aligned_cols=23  Identities=30%  Similarity=0.898  Sum_probs=16.9

Q ss_pred             cCCCCCccccCChHHHHHHhhhh
Q psy8793         297 YQCPQCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~~h  319 (345)
                      |.|+.|++.|.+...|.+|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            56777777777777777777654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.81  E-value=2.3e-05  Score=38.90  Aligned_cols=23  Identities=35%  Similarity=0.725  Sum_probs=14.1

Q ss_pred             eecCcCccccCChHHHHHHHHHh
Q psy8793         269 FKCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       269 ~~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                      |.|++|++.|.+...|..|++.|
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHH
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhh
Confidence            56667777777777777776654

...

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.81  E-value=4.1e-06  Score=59.08  Aligned_cols=73  Identities=19%  Similarity=0.417  Sum_probs=20.4

Q ss_pred             cCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhh
Q psy8793         242 SCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       242 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  319 (345)
                      .|..|+..|.+...|..|+...|+-..-    ....+.....+..+++.-. ...+.|..|++.|.+...|..|++.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~~-~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKKV-KESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc----ccccccccccccccccccc-CCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            3777888888888888888766653211    1112223344444443321 12588999999999999999998854

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.69  E-value=2.7e-05  Score=39.96  Aligned_cols=25  Identities=32%  Similarity=0.747  Sum_probs=15.4

Q ss_pred             eeecCcCccccCChHHHHHHHHHhC
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVHM  292 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h~  292 (345)
                      +|+|..|++.|.+...|..|++.|.
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhc
Confidence            3566666666666666666665553

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.65  E-value=3.8e-05  Score=54.02  Aligned_cols=73  Identities=26%  Similarity=0.476  Sum_probs=21.2

Q ss_pred             ccCCCcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHh
Q psy8793         214 PCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       214 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                      .|..|+..|.+...|..|+...++-..-    ....+.....+..++... -...+.|..|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc----cccccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            4788888888888888888776653211    111122333344443322 223689999999999999999999864

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.59  E-value=3.5e-05  Score=38.21  Aligned_cols=24  Identities=29%  Similarity=0.827  Sum_probs=17.9

Q ss_pred             cCCCCCccccCChHHHHHHhhhhc
Q psy8793         297 YQCPQCPMAYKTNISLSAHLMKHT  320 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~~h~  320 (345)
                      |.|++|++.|.+...|..|+..|+
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            578888888888888888887664

...

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.55  E-value=3.6e-05  Score=62.92  Aligned_cols=70  Identities=26%  Similarity=0.496  Sum_probs=41.9

Q ss_pred             CCceeecCc--CccccCChHHHHHHHHH-hCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhh
Q psy8793         265 NNEIFKCTK--CDKVFQHIQLLNRHQLV-HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLI  341 (345)
Q Consensus       265 ~~~~~~C~~--C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  341 (345)
                      +++||+|++  |+|.|++..-|+-|+.- |-..+...=+.=.          .|.-.-...|||+|++|+|.|.....|+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~----------~~~~F~~~~KPYrCevC~KRYKNlNGLK  415 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPE----------KMNIFSAKDKPYRCEVCDKRYKNLNGLK  415 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhccccCcccCCCCCcc----------ccccccccCCceeccccchhhccCccce
Confidence            468999988  99999999999999764 4332221111000          1111122346677777777776666666


Q ss_pred             hcc
Q psy8793         342 SHY  344 (345)
Q Consensus       342 ~H~  344 (345)
                      -|.
T Consensus       416 YHr  418 (423)
T COG5189         416 YHR  418 (423)
T ss_pred             ecc
Confidence            664

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.50  E-value=5.2e-05  Score=38.90  Aligned_cols=26  Identities=23%  Similarity=0.654  Sum_probs=21.9

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      ||.|..|++.|.+...|..|++.|.+
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~   26 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCS   26 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcC
Confidence            57899999999999999999887753

>KOG2785|consensus

Probab=97.33  E-value=0.00075  Score=57.13  Aligned_cols=75  Identities=20%  Similarity=0.288  Sum_probs=49.7

Q ss_pred             CcccccccccccCCHHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCCCCCCccccCCCc---ccccChh
Q psy8793         150 KPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCE---KVYSCAS  226 (345)
Q Consensus       150 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~---~~f~~~~  226 (345)
                      -|-.|-.|+..+.+...-..||..+|+-..-     .=.+ ......|..=+...-+    ..+.|..|+   +.|.+..
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIP-----dreY-L~D~~GLl~YLgeKV~----~~~~CL~CN~~~~~f~sle  234 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIP-----DREY-LTDEKGLLKYLGEKVG----IGFICLFCNELGRPFSSLE  234 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCC-----chHh-hhchhHHHHHHHHHhc----cCceEEEeccccCcccccH
Confidence            3578999999999999999999998875210     0011 1222222222222222    348888888   9999999


Q ss_pred             hHHHHHHH
Q psy8793         227 SLTKHMKA  234 (345)
Q Consensus       227 ~l~~H~~~  234 (345)
                      ..+.||..
T Consensus       235 avr~HM~~  242 (390)
T KOG2785|consen  235 AVRAHMRD  242 (390)
T ss_pred             HHHHHHhh
Confidence            99999875

>smart00355 ZnF_C2H2 zinc finger

Probab=97.10  E-value=0.0005  Score=34.57  Aligned_cols=21  Identities=33%  Similarity=0.744  Sum_probs=9.8

Q ss_pred             ecCcCccccCChHHHHHHHHH
Q psy8793         270 KCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       270 ~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      .|+.|++.|.+.+.|..|++.
T Consensus         2 ~C~~C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        2 RCPECGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CCCCCcchhCCHHHHHHHHHH
Confidence            344444444444444444443

>KOG2231|consensus

Probab=97.04  E-value=0.0021  Score=59.33  Aligned_cols=117  Identities=21%  Similarity=0.471  Sum_probs=65.6

Q ss_pred             ccccccccccCCHHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCCCCCCccccCCCcc---ccc-----
Q psy8793         152 HTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEK---VYS-----  223 (345)
Q Consensus       152 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~---~f~-----  223 (345)
                      +.|.+|+..|....            ..-.|.  .| ..|.+...|+.|+..-|..     +.|..|-.   .|.     
T Consensus       100 ~~C~~C~~~~~~~~------------~~~~~~--~c-~~~~s~~~Lk~H~~~~H~~-----~~c~lC~~~~kif~~e~k~  159 (669)
T KOG2231|consen  100 HSCHICDRRFRALY------------NKKECL--HC-TEFKSVENLKNHMRDQHKL-----HLCSLCLQNLKIFINERKL  159 (669)
T ss_pred             hhcCccccchhhhc------------ccCCCc--cc-cchhHHHHHHHHHHHhhhh-----hccccccccceeeeeeeeh
Confidence            67888888763211            011232  45 5666666677776554443     44444422   121     


Q ss_pred             -ChhhHHHHHHHhcC-CCC----ccCccccccCCChhHHHHHhhhhcCCceeecCcC------ccccCChHHHHHHHHHh
Q psy8793         224 -CASSLTKHMKARLG-RQP----VSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKC------DKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       224 -~~~~l~~H~~~~~~-~~~----~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C------~~~f~~~~~l~~H~~~h  291 (345)
                       +...|..|++.-.. +..    --|..|...|.....|..|++..|    |.|.+|      +.-|.+.+.|..|.+.+
T Consensus       160 Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~~  235 (669)
T KOG2231|consen  160 YTRAELNLHLMFGDPDDESCRGHPLCKFCHERFLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRKG  235 (669)
T ss_pred             ehHHHHHHHHhcCCCccccccCCccchhhhhhhccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhhc
Confidence             23456666654322 221    236677777777777777777666    555555      34566777777777765


Q ss_pred             C
Q psy8793         292 M  292 (345)
Q Consensus       292 ~  292 (345)
                      +
T Consensus       236 H  236 (669)
T KOG2231|consen  236 H  236 (669)
T ss_pred             C
Confidence            4

>smart00355 ZnF_C2H2 zinc finger

Probab=97.03  E-value=0.00066  Score=34.12  Aligned_cols=24  Identities=33%  Similarity=0.865  Sum_probs=20.7

Q ss_pred             cCCCCCccccCChHHHHHHhhhhc
Q psy8793         297 YQCPQCPMAYKTNISLSAHLMKHT  320 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~~h~  320 (345)
                      |.|..|++.|.....|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            579999999999999999988664

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.91  E-value=0.00021  Score=35.80  Aligned_cols=22  Identities=32%  Similarity=0.883  Sum_probs=13.5

Q ss_pred             ccCCCCCCCCCCCchhHHHHhh
Q psy8793           8 YQCSQCPKAFNQKGNLKEHFRI   29 (345)
Q Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~   29 (345)
                      |.|.+|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666654

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.89  E-value=0.001  Score=32.90  Aligned_cols=22  Identities=32%  Similarity=0.581  Sum_probs=10.2

Q ss_pred             eecCcCccccCChHHHHHHHHHh
Q psy8793         269 FKCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       269 ~~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                      |+|+.|+.... .+.|..|++.|
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            44555555554 55555555543

>PRK04860 hypothetical protein; Provisional

Probab=96.89  E-value=0.00046  Score=52.38  Aligned_cols=37  Identities=24%  Similarity=0.597  Sum_probs=21.1

Q ss_pred             eeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCC
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKT  308 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  308 (345)
                      +|.|. |+.   ....+.+|.++|+++++|.|..|+..|..
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~  155 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVF  155 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEE
Confidence            46665 654   44455566666666666666666655543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.89  E-value=0.0005  Score=34.01  Aligned_cols=24  Identities=33%  Similarity=0.825  Sum_probs=18.3

Q ss_pred             cCCCCCccccCChHHHHHHhhhhcC
Q psy8793         297 YQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      |+|+.|++..+ ...|.+|++.|++
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            67999998888 8899999887653

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.87  E-value=0.00086  Score=33.52  Aligned_cols=22  Identities=32%  Similarity=0.608  Sum_probs=13.4

Q ss_pred             eecCcCccccCChHHHHHHHHH
Q psy8793         269 FKCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       269 ~~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      |.|..|++.|.+...|..|++.
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTT
T ss_pred             CCCCCCCCCcCCHHHHHHHHCc
Confidence            4566666666666666666554

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.82  E-value=0.00076  Score=34.44  Aligned_cols=22  Identities=23%  Similarity=0.730  Sum_probs=19.1

Q ss_pred             ccCCcCCccccchhhhcccccc
Q psy8793          36 FTCNICSRKFTTYSQVRRSSNT   57 (345)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~   57 (345)
                      |.|.+|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            7888999999999999888876

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=96.81  E-value=0.0021  Score=58.43  Aligned_cols=118  Identities=25%  Similarity=0.461  Sum_probs=78.2

Q ss_pred             ccccCCCcccccChhhHHHHHH--HhcCC--CCccCc--cccccCCChhHHHHHhhhhcCCceeecCc--CccccCChH-
Q psy8793         212 RFPCDKCEKVYSCASSLTKHMK--ARLGR--QPVSCD--ICHKEFTHPSSVLYHKQSIHNNEIFKCTK--CDKVFQHIQ-  282 (345)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~H~~--~~~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~-  282 (345)
                      ++.|..|...|.....+..|.+  .|.++  .++.|+  .|++.|.....+..|...+.+..++.+..  +...+.... 
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  368 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLLN  368 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccccC
Confidence            5788888888888888888888  78888  888888  78888888888888888888766655533  333332222 


Q ss_pred             ----------------------------------HHHHHHHHhCCCC--CcCCCCCccccCChHHHHHHhhhhcCCCccc
Q psy8793         283 ----------------------------------LLNRHQLVHMDTR--PYQCPQCPMAYKTNISLSAHLMKHTGAKPYV  326 (345)
Q Consensus       283 ----------------------------------~l~~H~~~h~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  326 (345)
                                                        .+..|...|....  .+.+..|...|.....+..|++.|....++.
T Consensus       369 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  448 (467)
T COG5048         369 NEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPLL  448 (467)
T ss_pred             CCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCcee
Confidence                                              2222222222212  3556777777777777777777776665555


Q ss_pred             ccc
Q psy8793         327 CEI  329 (345)
Q Consensus       327 C~~  329 (345)
                      |..
T Consensus       449 ~~~  451 (467)
T COG5048         449 CSI  451 (467)
T ss_pred             ecc
Confidence            533

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.80  E-value=0.0018  Score=37.59  Aligned_cols=30  Identities=20%  Similarity=0.375  Sum_probs=15.1

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCCC
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      +.|..|++|+..+.+..+|.+|+...++.+
T Consensus        22 ~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   22 EQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             S--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             CCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            445666666666666666666665555444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.73  E-value=0.00083  Score=51.01  Aligned_cols=40  Identities=25%  Similarity=0.640  Sum_probs=32.8

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccc
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRS  338 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  338 (345)
                      -+|.|. |+.   ....+..|.++|+++++|.|..|+..|....
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFKG  157 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEec
Confidence            368898 887   6678889999999999999999998877544

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.63  E-value=0.001  Score=38.58  Aligned_cols=37  Identities=22%  Similarity=0.375  Sum_probs=19.6

Q ss_pred             HHHHhhh-cCCCCccCCcCCccccchhhhccccccccc
Q psy8793          24 KEHFRIH-TGEKPFTCNICSRKFTTYSQVRRSSNTSAR   60 (345)
Q Consensus        24 ~~H~~~h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (345)
                      ..+.+.+ ..+.|-.|++|+..+....+|++|+...|.
T Consensus        12 ~~~~k~~~~S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   12 TKKPKSKSQSEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             ----CCCCTTS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             hhHHHHhhccCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            3444333 345677888888888888888888876654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.59  E-value=0.00098  Score=34.03  Aligned_cols=21  Identities=24%  Similarity=0.771  Sum_probs=13.7

Q ss_pred             cccccchhhccccchhhhccC
Q psy8793         325 YVCEICNKVLTHRSSLISHYR  345 (345)
Q Consensus       325 ~~C~~C~~~f~~~~~l~~H~r  345 (345)
                      |.|..|++.|.+...|..||+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTT
T ss_pred             CCcccCCCCcCCHHHHHHHHc
Confidence            556666666666666666664

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2482|consensus

Probab=96.51  E-value=0.021  Score=47.75  Aligned_cols=154  Identities=18%  Similarity=0.329  Sum_probs=92.7

Q ss_pred             Cccccccccccc-CCHHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCCCCCCccccCCCcccccChhhH
Q psy8793         150 KPHTCELCSKGF-LSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSL  228 (345)
Q Consensus       150 ~~~~C~~C~~~f-~~~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l  228 (345)
                      ...+|-.|+..+ ..++.+..|+-.-|+-.-      +-......-..|..|++..-.     .+.|-.|.+.|.....|
T Consensus       143 fslqClFCn~e~lgnRs~~l~Hlf~~H~lni------GlpDniVyvnelLehLkekL~-----r~~CLyCekifrdkntL  211 (423)
T KOG2482|consen  143 FSLQCLFCNNEGLGNRSEILEHLFHVHGLNI------GLPDNIVYVNELLEHLKEKLE-----RLRCLYCEKIFRDKNTL  211 (423)
T ss_pred             eeeEEEEecchhcccHHHHHHHHHHHhhhcc------CCCcceeeHHHHHHHHHHHHh-----hheeeeeccccCCcHHH
Confidence            346788887663 566677777765444321      233445555677777766433     38999999999999999


Q ss_pred             HHHHHHh--cCCCC--------ccCcc--ccccCCChhHHHHHh--hhh---------------cCCce--eecCcCccc
Q psy8793         229 TKHMKAR--LGRQP--------VSCDI--CHKEFTHPSSVLYHK--QSI---------------HNNEI--FKCTKCDKV  277 (345)
Q Consensus       229 ~~H~~~~--~~~~~--------~~C~~--C~~~f~~~~~l~~H~--~~~---------------~~~~~--~~C~~C~~~  277 (345)
                      ..||+..  ..-.|        |.=..  -+++   ......+.  ...               .+..+  ..|-+|...
T Consensus       212 keHMrkK~HrrinPknreYDkfyiINY~ev~ks---~t~~~~e~dret~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~  288 (423)
T KOG2482|consen  212 KEHMRKKRHRRINPKNREYDKFYIINYLEVGKS---WTIVHSEDDRETNEDINETDDTWSDWNEDDAEALSVVCLFCTNF  288 (423)
T ss_pred             HHHHHhccCcccCCCccccceEEEEeHhhcCCc---cchhhhhhhhhhhccccccccchhhhhcCCCCccceEEEeeccc
Confidence            9999853  22111        11000  0000   00001111  000               01112  589999999


Q ss_pred             cCChHHHHHHHHHhCC---------------------------CCCcCCCCCccccCChHHHHHHhh
Q psy8793         278 FQHIQLLNRHQLVHMD---------------------------TRPYQCPQCPMAYKTNISLSAHLM  317 (345)
Q Consensus       278 f~~~~~l~~H~~~h~~---------------------------~~~~~C~~C~~~f~~~~~l~~H~~  317 (345)
                      ..+...|..||+.-+.                           .+.-.|..|.-.|-....|+.||.
T Consensus       289 ~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~~~c~~cd~~F~~e~~l~~hm~  355 (423)
T KOG2482|consen  289 YENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKKSRCAECDLSFWKEPGLLIHMV  355 (423)
T ss_pred             hhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhccccccccccccCcchhhhhcc
Confidence            9999999999986321                           123467788888888888888876

>KOG2785|consensus

Probab=96.47  E-value=0.017  Score=49.26  Aligned_cols=168  Identities=15%  Similarity=0.224  Sum_probs=99.0

Q ss_pred             cccccccccccCCHHHHHHHHhhh-cC--CCCccccc-cccCccccchHhHHHHhhhhcCCCCCCccccCCCcccccChh
Q psy8793         151 PHTCELCSKGFLSAESYKCHLRRH-KG--EKPVTCTF-ENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCAS  226 (345)
Q Consensus       151 ~~~C~~C~~~f~~~~~l~~H~~~~-~~--~~~~~C~~-~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~  226 (345)
                      .|.|.-|...|.+...-+.|+++- |.  .+.-.-+. +.--..|..+.....-......+....++.|..|.+.|.+..
T Consensus         3 ~ftC~tC~v~F~~ad~Qr~HyKSdWHRYNLKRkVA~lPPItaE~F~~k~~s~~~~~~~~~e~~~~~~~c~~c~k~~~s~~   82 (390)
T KOG2785|consen    3 GFTCNTCNVEFDDADEQRAHYKSDWHRYNLKRKVASLPPITAEEFNEKVLSDDSEKEENLEEAESVVYCEACNKSFASPK   82 (390)
T ss_pred             cceeeceeeeeccHHHHHHHhhhhHHHhhHHhHhhcCCCcCHHHHhHHHhhhhhhhhhhhhhcccceehHHhhccccChh
Confidence            489999999999999999999752 11  11000000 122234444332222222222233346789999999999999


Q ss_pred             hHHHHHHHhcC----CC-------------Ccc-------------CccccccCCChhHHHHHhh------------hhc
Q psy8793         227 SLTKHMKARLG----RQ-------------PVS-------------CDICHKEFTHPSSVLYHKQ------------SIH  264 (345)
Q Consensus       227 ~l~~H~~~~~~----~~-------------~~~-------------C~~C~~~f~~~~~l~~H~~------------~~~  264 (345)
                      ....|+..-..    .+             .+.             +..+............+..            ...
T Consensus        83 a~~~hl~Sk~h~~~~~~~~r~~e~d~a~~~q~~~~~p~~l~~~~e~e~~~~E~~~~~d~~~e~~~dd~~Edi~~d~~~e~  162 (390)
T KOG2785|consen   83 AHENHLKSKKHVENLSNHQRSEEGDSAKISQLPSRRPSNLQNKGESELKWYEVDSDEDSSEEEEEDDEEEDIEEDGDDED  162 (390)
T ss_pred             hHHHHHHHhhcchhhhhhhccccccchhhhhccccCccccccCCCcccchhhcccccccchhhccCcchhhhhhccchhc
Confidence            98888864211    00             111             1111111111011111100            001


Q ss_pred             CCceeecCcCccccCChHHHHHHHHHhCCC-----------------------CCcCCCCCc---cccCChHHHHHHhhh
Q psy8793         265 NNEIFKCTKCDKVFQHIQLLNRHQLVHMDT-----------------------RPYQCPQCP---MAYKTNISLSAHLMK  318 (345)
Q Consensus       265 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~  318 (345)
                      ...|-.|-+|++.+.+-..-..||..++|-                       ..|.|..|+   +.|.+....+.||..
T Consensus       163 e~~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  163 ELIPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             ccCCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            123567999999999999999999987763                       238899999   899999999999874

>KOG1146|consensus

Probab=96.15  E-value=0.0013  Score=64.50  Aligned_cols=55  Identities=24%  Similarity=0.477  Sum_probs=47.5

Q ss_pred             CCCCccCCCCCCCCCCCchhHHHHhh-hc------------------------CCCCccCCcCCccccchhhhccccccc
Q psy8793           4 GIKQYQCSQCPKAFNQKGNLKEHFRI-HT------------------------GEKPFTCNICSRKFTTYSQVRRSSNTS   58 (345)
Q Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~-h~------------------------~~~~~~C~~C~~~f~~~~~l~~H~~~~   58 (345)
                      -.+.|+|+.|++.|+....|..||++ |.                        ..++|.|..|...+...++|..||+..
T Consensus       462 ~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS~  541 (1406)
T KOG1146|consen  462 FFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQSD  541 (1406)
T ss_pred             ccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHHHHH
Confidence            34789999999999999999999987 21                        235699999999999999999999874

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.98  E-value=0.017  Score=48.35  Aligned_cols=129  Identities=22%  Similarity=0.336  Sum_probs=85.1

Q ss_pred             ccccc--cccccCCHHHHHHHHhhhcCCCCcccccc-------ccCccccchHhHHHHhhhhcCCCCC-CccccCCCccc
Q psy8793         152 HTCEL--CSKGFLSAESYKCHLRRHKGEKPVTCTFE-------NCTETFVESWAMRKHVRTCHNKPTV-NRFPCDKCEKV  221 (345)
Q Consensus       152 ~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~~-------~C~~~f~~~~~l~~H~~~~~~~~~~-~~~~C~~C~~~  221 (345)
                      |.||.  |.........|..|.+..++.  +.|...       .|.-..-++..|..|...-..+... +--.|..|...
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            77875  777777788999999887654  444410       1222333556677776654443222 22359999999


Q ss_pred             ccChhhHHHHHHHhcCCCCccCcccccc-------CCChhHHHHHhhhhcCCceeecCc--Cc----cccCChHHHHHHH
Q psy8793         222 YSCASSLTKHMKARLGRQPVSCDICHKE-------FTHPSSVLYHKQSIHNNEIFKCTK--CD----KVFQHIQLLNRHQ  288 (345)
Q Consensus       222 f~~~~~l~~H~~~~~~~~~~~C~~C~~~-------f~~~~~l~~H~~~~~~~~~~~C~~--C~----~~f~~~~~l~~H~  288 (345)
                      |=+-..|..|++..+..    |-+|+.+       |.+...|.+|.+..|    |.|.+  |.    ..|.....|..|+
T Consensus       230 FYdDDEL~~HcR~~HE~----ChICD~v~p~~~QYFK~Y~~Le~HF~~~h----y~ct~qtc~~~k~~vf~~~~el~~h~  301 (493)
T COG5236         230 FYDDDELRRHCRLRHEA----CHICDMVGPIRYQYFKSYEDLEAHFRNAH----YCCTFQTCRVGKCYVFPYHTELLEHL  301 (493)
T ss_pred             ecChHHHHHHHHhhhhh----hhhhhccCccchhhhhCHHHHHHHhhcCc----eEEEEEEEecCcEEEeccHHHHHHHH
Confidence            99889999999887553    6666643       677778888877655    66644  32    3578888888887


Q ss_pred             HH
Q psy8793         289 LV  290 (345)
Q Consensus       289 ~~  290 (345)
                      .-
T Consensus       302 ~~  303 (493)
T COG5236         302 TR  303 (493)
T ss_pred             HH
Confidence            53

>KOG2231|consensus

Probab=95.94  E-value=0.015  Score=53.95  Aligned_cols=112  Identities=21%  Similarity=0.377  Sum_probs=77.6

Q ss_pred             cccCCCcccccChhhHHHHHHHhcCCCCccCccccc---------cCCChhHHHHHhhhhcC-Cce----eecCcCcccc
Q psy8793         213 FPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHK---------EFTHPSSVLYHKQSIHN-NEI----FKCTKCDKVF  278 (345)
Q Consensus       213 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~---------~f~~~~~l~~H~~~~~~-~~~----~~C~~C~~~f  278 (345)
                      ..|..| -.|.+...|+.|+...|.-  +.|.+|-.         ..-++..|..|+..--. ++.    -.|..|...|
T Consensus       116 ~~~~~c-~~~~s~~~Lk~H~~~~H~~--~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~d~~s~rGhp~C~~C~~~f  192 (669)
T KOG2231|consen  116 KECLHC-TEFKSVENLKNHMRDQHKL--HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDPDDESCRGHPLCKFCHERF  192 (669)
T ss_pred             CCCccc-cchhHHHHHHHHHHHhhhh--hccccccccceeeeeeeehehHHHHHHHHhcCCCccccccCCccchhhhhhh
Confidence            568888 7888889999999665443  45555442         22356678888764433 221    4799999999


Q ss_pred             CChHHHHHHHHHhCCCCCcCC---CCCccccCChHHHHHHhhhhcCCCccccc--cchh
Q psy8793         279 QHIQLLNRHQLVHMDTRPYQC---PQCPMAYKTNISLSAHLMKHTGAKPYVCE--ICNK  332 (345)
Q Consensus       279 ~~~~~l~~H~~~h~~~~~~~C---~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~  332 (345)
                      .....|.+|++.++.... -|   +.++..|.....|..|.+.+|    |.|+  .|--
T Consensus       193 ld~~el~rH~~~~h~~ch-fC~~~~~~neyy~~~~dLe~HfR~~H----flCE~~~C~~  246 (669)
T KOG2231|consen  193 LDDDELYRHLRFDHEFCH-FCDYKTGQNEYYNDYDDLEEHFRKGH----FLCEEEFCRT  246 (669)
T ss_pred             ccHHHHHHhhccceehee-ecCcccccchhcccchHHHHHhhhcC----cccccccccc
Confidence            999999999987664321 12   344678888999999988776    5665  5543

>KOG2482|consensus

Probab=95.92  E-value=0.02  Score=47.92  Aligned_cols=124  Identities=17%  Similarity=0.359  Sum_probs=78.3

Q ss_pred             CCHHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCC--CCCC-c----cccCCCcccccChhhHHHHHH-
Q psy8793         162 LSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNK--PTVN-R----FPCDKCEKVYSCASSLTKHMK-  233 (345)
Q Consensus       162 ~~~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~--~~~~-~----~~C~~C~~~f~~~~~l~~H~~-  233 (345)
                      .....|..|++.....  ++|-+  |.+.|+.+..|+.||+...-.  .+.+ .    |.-+ -...-+++.....+.. 
T Consensus       180 VyvnelLehLkekL~r--~~CLy--CekifrdkntLkeHMrkK~HrrinPknreYDkfyiIN-Y~ev~ks~t~~~~e~dr  254 (423)
T KOG2482|consen  180 VYVNELLEHLKEKLER--LRCLY--CEKIFRDKNTLKEHMRKKRHRRINPKNREYDKFYIIN-YLEVGKSWTIVHSEDDR  254 (423)
T ss_pred             eeHHHHHHHHHHHHhh--heeee--eccccCCcHHHHHHHHhccCcccCCCccccceEEEEe-HhhcCCccchhhhhhhh
Confidence            3456678888765533  67775  999999999999999874321  1111 1    1111 0111112222222221 


Q ss_pred             -Hh--c-------------CCC--CccCccccccCCChhHHHHHhhhhcCC---------------------------ce
Q psy8793         234 -AR--L-------------GRQ--PVSCDICHKEFTHPSSVLYHKQSIHNN---------------------------EI  268 (345)
Q Consensus       234 -~~--~-------------~~~--~~~C~~C~~~f~~~~~l~~H~~~~~~~---------------------------~~  268 (345)
                       +-  .             +..  ...|-.|.....+...|..|+...|.-                           ..
T Consensus       255 et~~d~~E~D~~wsDw~ed~a~a~~v~CLfC~~~~en~~~l~eHmk~vHe~Dl~Ki~sd~~Ln~YqrvrviNyiRkq~~~  334 (423)
T KOG2482|consen  255 ETNEDINETDDTWSDWNEDDAEALSVVCLFCTNFYENPVFLFEHMKIVHEFDLLKIQSDYSLNFYQRVRVINYIRKQKKK  334 (423)
T ss_pred             hhhccccccccchhhhhcCCCCccceEEEeeccchhhHHHHHHHHHHHHHhhHHhhccccccchhhhhhHHHHHHHHhhc
Confidence             10  0             111  257999999999999999999887741                           12


Q ss_pred             eecCcCccccCChHHHHHHHHH
Q psy8793         269 FKCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       269 ~~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      -.|-.|.-+|..+..|..||..
T Consensus       335 ~~c~~cd~~F~~e~~l~~hm~e  356 (423)
T KOG2482|consen  335 SRCAECDLSFWKEPGLLIHMVE  356 (423)
T ss_pred             cccccccccccCcchhhhhccc
Confidence            4688899999999999999875

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=95.57  E-value=0.012  Score=49.12  Aligned_cols=134  Identities=20%  Similarity=0.353  Sum_probs=85.5

Q ss_pred             CccccccccCccccchHhHHHHhhhhcCCCCCCccccCCCc---ccccCh------hhHHHHHHHhcCCCCc----cCcc
Q psy8793         179 PVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCE---KVYSCA------SSLTKHMKARLGRQPV----SCDI  245 (345)
Q Consensus       179 ~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~---~~f~~~------~~l~~H~~~~~~~~~~----~C~~  245 (345)
                      .|.|+...|.........|+.|.+..|+.     +.|..|-   +.|...      ..|..|...-..+..|    .|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~-----~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~F  225 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGF-----VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIF  225 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCc-----EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhh
Confidence            37788778888888888889998887776     7787774   345433      3455554433222223    4888


Q ss_pred             ccccCCChhHHHHHhhhhcCCceeecCcCcc-------ccCChHHHHHHHHHhCCCCCc-CCCCCc-cccCChHHHHHHh
Q psy8793         246 CHKEFTHPSSVLYHKQSIHNNEIFKCTKCDK-------VFQHIQLLNRHQLVHMDTRPY-QCPQCP-MAYKTNISLSAHL  316 (345)
Q Consensus       246 C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~-------~f~~~~~l~~H~~~h~~~~~~-~C~~C~-~~f~~~~~l~~H~  316 (345)
                      |..-|-+...|..|++..|.    .|-+|++       -|.+..+|..|.+.-+-.-.+ -|.+-. ..|.+...|+.|+
T Consensus       226 C~~~FYdDDEL~~HcR~~HE----~ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy~ct~qtc~~~k~~vf~~~~el~~h~  301 (493)
T COG5236         226 CKIYFYDDDELRRHCRLRHE----ACHICDMVGPIRYQYFKSYEDLEAHFRNAHYCCTFQTCRVGKCYVFPYHTELLEHL  301 (493)
T ss_pred             ccceecChHHHHHHHHhhhh----hhhhhhccCccchhhhhCHHHHHHHhhcCceEEEEEEEecCcEEEeccHHHHHHHH
Confidence            88888888888888876663    3444443       377888888887643222111 132222 5678888888887


Q ss_pred             hhhcC
Q psy8793         317 MKHTG  321 (345)
Q Consensus       317 ~~h~~  321 (345)
                      ...++
T Consensus       302 ~~~h~  306 (493)
T COG5236         302 TRFHK  306 (493)
T ss_pred             HHHhh
Confidence            65544

>KOG1146|consensus

Probab=95.40  E-value=0.0047  Score=60.74  Aligned_cols=127  Identities=17%  Similarity=0.287  Sum_probs=66.9

Q ss_pred             CccccCCCcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHH
Q psy8793         211 NRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       211 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      +.++|++|+..|+....|..|++..+.+..-  .+|.. +.+...+.+-....-+.++|.|..|..++....+|..|++.
T Consensus       464 kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~--~~c~~-gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~LsihlqS  540 (1406)
T KOG1146|consen  464 KTLKCPKCNWHYKLAQTLGVHMRSKHPESQS--AYCKA-GQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHLQS  540 (1406)
T ss_pred             ccccCCccchhhhhHHHhhhcccccccccch--hHhHh-ccccccccccccccCCCCcccceeeeeeeecchHHHHHHHH
Confidence            4466666666666666666666653322110  11111 11111111111112235678888888888888888888774


Q ss_pred             --hCCC-----------------------------------------CCcCCCCCccccCChHHHHHHhh-hhcCCCccc
Q psy8793         291 --HMDT-----------------------------------------RPYQCPQCPMAYKTNISLSAHLM-KHTGAKPYV  326 (345)
Q Consensus       291 --h~~~-----------------------------------------~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~  326 (345)
                        |..+                                         -.+.|..|++-.+-..+|+-|+. .++...|--
T Consensus       541 ~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmtss~~s~~p~~  620 (1406)
T KOG1146|consen  541 DLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTASPSSSPPSL  620 (1406)
T ss_pred             HhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhccccccccCCCCCChHH
Confidence              3110                                         12566666666666666666655 344444455


Q ss_pred             cccchhhccccchh
Q psy8793         327 CEICNKVLTHRSSL  340 (345)
Q Consensus       327 C~~C~~~f~~~~~l  340 (345)
                      |-.|+-.+.....+
T Consensus       621 ~Lq~~it~~l~~~~  634 (1406)
T KOG1146|consen  621 VLQQNITSSLASLL  634 (1406)
T ss_pred             Hhhhcchhhccccc
Confidence            55555555444443

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.95  E-value=0.025  Score=28.11  Aligned_cols=19  Identities=26%  Similarity=0.684  Sum_probs=12.0

Q ss_pred             ecCcCccccCChHHHHHHHH
Q psy8793         270 KCTKCDKVFQHIQLLNRHQL  289 (345)
Q Consensus       270 ~C~~C~~~f~~~~~l~~H~~  289 (345)
                      .|+.||..| ..+.|..|++
T Consensus         4 ~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    4 PCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             cCCCCCCEE-CHHHHHHHHH
Confidence            566677766 4555666654

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.83  E-value=0.019  Score=30.77  Aligned_cols=26  Identities=23%  Similarity=0.860  Sum_probs=21.0

Q ss_pred             CccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCcc
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRK   44 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   44 (345)
                      .|.|.+||..|....            .++.||+|+..
T Consensus         1 ~~~C~~CGy~y~~~~------------~~~~CP~Cg~~   26 (33)
T cd00350           1 KYVCPVCGYIYDGEE------------APWVCPVCGAP   26 (33)
T ss_pred             CEECCCCCCEECCCc------------CCCcCcCCCCc
Confidence            378999999987543            68999999863

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.72  E-value=0.016  Score=31.53  Aligned_cols=22  Identities=18%  Similarity=0.631  Sum_probs=14.9

Q ss_pred             CccCCCCCCCCCCCchhHHHHh
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFR   28 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~   28 (345)
                      +|.|.+|++.|.+...+..|+.
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            5667777777776666666664

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG4173|consensus

Probab=94.46  E-value=0.017  Score=44.52  Aligned_cols=79  Identities=22%  Similarity=0.556  Sum_probs=55.8

Q ss_pred             CccccCC--CcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcC----------CceeecCc--Ccc
Q psy8793         211 NRFPCDK--CEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHN----------NEIFKCTK--CDK  276 (345)
Q Consensus       211 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~----------~~~~~C~~--C~~  276 (345)
                      ..+.|+.  |-..|.+...+..|....++.   .|+.|.+.|.+...|..|+...|+          ...|+|-.  |+.
T Consensus        78 ~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~  154 (253)
T KOG4173|consen   78 PAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTE  154 (253)
T ss_pred             ccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhh
Confidence            4466654  556777777777777766664   588888888888888888765553          44588844  888


Q ss_pred             ccCChHHHHHHHH-HhC
Q psy8793         277 VFQHIQLLNRHQL-VHM  292 (345)
Q Consensus       277 ~f~~~~~l~~H~~-~h~  292 (345)
                      .|.+..+-..|+- +|.
T Consensus       155 KFkT~r~RkdH~I~~Hk  171 (253)
T KOG4173|consen  155 KFKTSRDRKDHMIRMHK  171 (253)
T ss_pred             hhhhhhhhhhHHHHhcc
Confidence            8888888888864 564

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.39  E-value=0.045  Score=49.74  Aligned_cols=56  Identities=29%  Similarity=0.624  Sum_probs=51.8

Q ss_pred             CCccCCCCCCCCCCCchhHHHHh--hhcCC--CCccCC--cCCccccchhhhcccccccccc
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHFR--IHTGE--KPFTCN--ICSRKFTTYSQVRRSSNTSARN   61 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~~~~~   61 (345)
                      .++.|..|...|.....|..|..  .|..+  +++.|+  .|++.|.+...+..|...+...
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~  349 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSI  349 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCC
Confidence            47899999999999999999999  79999  999999  8999999999999999887755

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=94.18  E-value=0.11  Score=37.10  Aligned_cols=25  Identities=28%  Similarity=0.756  Sum_probs=16.8

Q ss_pred             cCC----CCCccccCChHHHHHHhhhhcC
Q psy8793         297 YQC----PQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       297 ~~C----~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      |.|    +.|++.+.+...+++|++.++|
T Consensus        81 ~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   81 YRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             eeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            667    7777777777777777665553

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=94.13  E-value=0.047  Score=27.11  Aligned_cols=21  Identities=24%  Similarity=0.444  Sum_probs=16.2

Q ss_pred             cCCCCCccccCChHHHHHHhhh
Q psy8793         297 YQCPQCPMAYKTNISLSAHLMK  318 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~~  318 (345)
                      ..|+.||+.| ....|..|+.+
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~~   23 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEKI   23 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHHh
Confidence            4688999998 66778888754

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.01  E-value=0.046  Score=29.68  Aligned_cols=22  Identities=23%  Similarity=0.410  Sum_probs=14.9

Q ss_pred             eeecCcCccccCChHHHHHHHH
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQL  289 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~  289 (345)
                      +|.|..|+..|.+...+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            3667777777776777777764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=93.74  E-value=0.05  Score=29.15  Aligned_cols=11  Identities=18%  Similarity=0.966  Sum_probs=5.9

Q ss_pred             eecCcCccccC
Q psy8793         269 FKCTKCDKVFQ  279 (345)
Q Consensus       269 ~~C~~C~~~f~  279 (345)
                      |+|..||..+.
T Consensus         2 ~~C~~CGy~y~   12 (33)
T cd00350           2 YVCPVCGYIYD   12 (33)
T ss_pred             EECCCCCCEEC
Confidence            45555555543

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG4173|consensus

Probab=93.71  E-value=0.024  Score=43.79  Aligned_cols=78  Identities=27%  Similarity=0.599  Sum_probs=54.6

Q ss_pred             CccCcc--ccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHH-h---------CCCCCcCC--CCCccc
Q psy8793         240 PVSCDI--CHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLV-H---------MDTRPYQC--PQCPMA  305 (345)
Q Consensus       240 ~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h---------~~~~~~~C--~~C~~~  305 (345)
                      .+.|++  |...|.+...+..|....|+.   -|.+|.+.|.+.-.|-.|+.. |         .|..-|+|  ..|+..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEgCt~K  155 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEGCTEK  155 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHhhhhh
Confidence            456765  667777777777777666655   688888888888888888764 4         34445777  667777


Q ss_pred             cCChHHHHHHhhhhc
Q psy8793         306 YKTNISLSAHLMKHT  320 (345)
Q Consensus       306 f~~~~~l~~H~~~h~  320 (345)
                      |.+...-..|+-.-+
T Consensus       156 FkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  156 FKTSRDRKDHMIRMH  170 (253)
T ss_pred             hhhhhhhhhHHHHhc
Confidence            777777777776443

>TIGR00622 ssl1 transcription factor ssl1

Probab=92.92  E-value=0.17  Score=35.56  Aligned_cols=19  Identities=16%  Similarity=0.394  Sum_probs=11.6

Q ss_pred             ccccCCCcccccChhhHHH
Q psy8793         212 RFPCDKCEKVYSCASSLTK  230 (345)
Q Consensus       212 ~~~C~~C~~~f~~~~~l~~  230 (345)
                      |..|+.|+....+...|.+
T Consensus        15 P~~CpiCgLtLVss~HLAR   33 (112)
T TIGR00622        15 PVECPICGLTLILSTHLAR   33 (112)
T ss_pred             CCcCCcCCCEEeccchHHH
Confidence            4566777766666655544

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=91.98  E-value=0.28  Score=34.91  Aligned_cols=82  Identities=12%  Similarity=0.218  Sum_probs=46.0

Q ss_pred             CccccCCCcccccChhhHHHHHHHhcCCC-CccCccccccCCChhHHHH---HhhhhcC----------Cceeec----C
Q psy8793         211 NRFPCDKCEKVYSCASSLTKHMKARLGRQ-PVSCDICHKEFTHPSSVLY---HKQSIHN----------NEIFKC----T  272 (345)
Q Consensus       211 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~-~~~C~~C~~~f~~~~~l~~---H~~~~~~----------~~~~~C----~  272 (345)
                      +-.+|..|+..... ..+..|++..+... ...-..=...+.....|..   .+..-..          -.-|.|    +
T Consensus        10 ~vlIC~~C~~av~~-~~v~~HL~~~H~~~~~~~~~~i~~~~~~~~~l~~~~~~~~~p~~~~~Pi~gLp~~~G~~C~~~~~   88 (109)
T PF12013_consen   10 RVLICRQCQYAVQP-SEVESHLRKRHHILKSQERQRIVEAIRQWPDLLPDPDDLQIPPDPSPPIPGLPVYDGYRCQCDPP   88 (109)
T ss_pred             CEEEeCCCCcccCc-hHHHHHHHHhcccccHHHHHHHHHHHHhhhhcccCccccCCCCCCCCcCCCCCCCCCeeeecCCC
Confidence            45789999998875 78999998544321 1100000000000000000   0000000          012899    9


Q ss_pred             cCccccCChHHHHHHHHHhCC
Q psy8793         273 KCDKVFQHIQLLNRHQLVHMD  293 (345)
Q Consensus       273 ~C~~~f~~~~~l~~H~~~h~~  293 (345)
                      .|++.+.+...+..|++.++|
T Consensus        89 ~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   89 HCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCCcEeccHHHHHHHHHHhcC
Confidence            999999999999999998764

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>KOG2893|consensus

Probab=91.90  E-value=0.045  Score=43.36  Aligned_cols=45  Identities=27%  Similarity=0.585  Sum_probs=33.5

Q ss_pred             cCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHH-hhhh
Q psy8793         271 CTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAH-LMKH  319 (345)
Q Consensus       271 C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h  319 (345)
                      |.+|+..|.++..|..|++.    +-|+|-+|.+..-+...|..| +++|
T Consensus        13 cwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen   13 CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhh
Confidence            78888888888888888664    337888888777676777766 4444

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=91.04  E-value=0.072  Score=43.02  Aligned_cols=44  Identities=25%  Similarity=0.511  Sum_probs=29.8

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHhh---hc-------CCCC-----ccCCcCCccccch
Q psy8793           5 IKQYQCSQCPKAFNQKGNLKEHFRI---HT-------GEKP-----FTCNICSRKFTTY   48 (345)
Q Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~---h~-------~~~~-----~~C~~C~~~f~~~   48 (345)
                      ++.++||+|+..|.+..-.....+.   ..       +..|     ..||.||+.|...
T Consensus         3 ~k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    3 DKKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CCceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            4678999999999986555545432   11       1122     4699999988653

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=90.78  E-value=0.16  Score=27.42  Aligned_cols=26  Identities=27%  Similarity=0.664  Sum_probs=20.3

Q ss_pred             CccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCcc
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRK   44 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   44 (345)
                      .|.|.+||..+...            ..|..|++|+..
T Consensus         2 ~~~C~~CG~i~~g~------------~~p~~CP~Cg~~   27 (34)
T cd00729           2 VWVCPVCGYIHEGE------------EAPEKCPICGAP   27 (34)
T ss_pred             eEECCCCCCEeECC------------cCCCcCcCCCCc
Confidence            58999999988653            256899999863

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=90.00  E-value=0.085  Score=31.28  Aligned_cols=28  Identities=21%  Similarity=0.341  Sum_probs=14.2

Q ss_pred             CCCccCCcCCccccchhhhccccccccc
Q psy8793          33 EKPFTCNICSRKFTTYSQVRRSSNTSAR   60 (345)
Q Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (345)
                      +.-+.||-|+..|....+..+|.+..|.
T Consensus        15 E~~lrCPRC~~~FR~~K~Y~RHVNKaH~   42 (65)
T COG4049          15 EEFLRCPRCGMVFRRRKDYIRHVNKAHG   42 (65)
T ss_pred             ceeeeCCchhHHHHHhHHHHHHhhHHhh
Confidence            3444555555555555555555544443

>KOG2186|consensus

Probab=89.94  E-value=0.14  Score=41.25  Aligned_cols=47  Identities=15%  Similarity=0.513  Sum_probs=39.2

Q ss_pred             ccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhcccccc
Q psy8793           8 YQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNT   57 (345)
Q Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   57 (345)
                      |.|.+||.+..- ..+..|+..-++. -|.|..|++.|.. .+...|..-
T Consensus         4 FtCnvCgEsvKK-p~vekH~srCrn~-~fSCIDC~k~F~~-~sYknH~kC   50 (276)
T KOG2186|consen    4 FTCNVCGESVKK-PQVEKHMSRCRNA-YFSCIDCGKTFER-VSYKNHTKC   50 (276)
T ss_pred             Eehhhhhhhccc-cchHHHHHhccCC-eeEEeeccccccc-chhhhhhhh
Confidence            899999999974 6888899988874 5999999999987 667777654

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=89.73  E-value=0.18  Score=25.28  Aligned_cols=9  Identities=33%  Similarity=1.191  Sum_probs=4.5

Q ss_pred             CCCCCcccc
Q psy8793         298 QCPQCPMAY  306 (345)
Q Consensus       298 ~C~~C~~~f  306 (345)
                      .|+.||..|
T Consensus        16 ~Cp~CG~~F   24 (26)
T PF10571_consen   16 FCPHCGYDF   24 (26)
T ss_pred             cCCCCCCCC
Confidence            355555544

Several members are annotated as putative helicases.

>TIGR00622 ssl1 transcription factor ssl1

Probab=89.69  E-value=0.6  Score=32.92  Aligned_cols=103  Identities=21%  Similarity=0.331  Sum_probs=51.5

Q ss_pred             ccccccccccCCHHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCCCCCCccccCCCcccccChhhHHHH
Q psy8793         152 HTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKH  231 (345)
Q Consensus       152 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H  231 (345)
                      |.|+.|+...              -+.|..|+  .|+-+..+...|.+-  -||-.+. .+|.         ....    
T Consensus         2 Y~CPrC~skv--------------C~LP~~Cp--iCgLtLVss~HLARS--yHHLfPl-~~f~---------ev~~----   49 (112)
T TIGR00622         2 YFCPQCRAKV--------------CELPVECP--ICGLTLILSTHLARS--YHHLFPL-KAFQ---------EIPL----   49 (112)
T ss_pred             ccCCCCCCCc--------------cCCCCcCC--cCCCEEeccchHHHh--hhccCCC-cccc---------cccc----
Confidence            6777777654              45677776  688887777666643  2222211 1111         0000    


Q ss_pred             HHHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHh
Q psy8793         232 MKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       232 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                         -.......|-.|...|.......  .........|+|+.|...|--.-++-.|..+|
T Consensus        50 ---~~~~~~~~C~~C~~~f~~~~~~~--~~~~~~~~~y~C~~C~~~FC~dCD~fiHe~Lh  104 (112)
T TIGR00622        50 ---EEYNGSRFCFGCQGPFPKPPVSP--FDELKDSHRYVCAVCKNVFCVDCDVFVHESLH  104 (112)
T ss_pred             ---cccCCCCcccCcCCCCCCccccc--ccccccccceeCCCCCCccccccchhhhhhcc
Confidence               00111123666666665432100  00012334577777777776666666665554

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2893|consensus

Probab=89.51  E-value=0.12  Score=41.04  Aligned_cols=49  Identities=20%  Similarity=0.472  Sum_probs=39.7

Q ss_pred             cCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhcccccccccc
Q psy8793           9 QCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN   61 (345)
Q Consensus         9 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   61 (345)
                      .|=.|+..|....-|.+|++.-    -|+|-+|.++..+--.|..|....|..
T Consensus        12 wcwycnrefddekiliqhqkak----hfkchichkkl~sgpglsihcmqvhke   60 (341)
T KOG2893|consen   12 WCWYCNREFDDEKILIQHQKAK----HFKCHICHKKLFSGPGLSIHCMQVHKE   60 (341)
T ss_pred             eeeecccccchhhhhhhhhhhc----cceeeeehhhhccCCCceeehhhhhhh
Confidence            5889999999999999997743    399999999888877888777655543

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=88.59  E-value=0.19  Score=29.87  Aligned_cols=23  Identities=30%  Similarity=0.706  Sum_probs=11.4

Q ss_pred             CceeecCcCccccCChHHHHHHH
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQ  288 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~  288 (345)
                      +.-+.||.|+..|....++.+|+
T Consensus        15 E~~lrCPRC~~~FR~~K~Y~RHV   37 (65)
T COG4049          15 EEFLRCPRCGMVFRRRKDYIRHV   37 (65)
T ss_pred             ceeeeCCchhHHHHHhHHHHHHh
Confidence            33445555555555555555554

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=88.26  E-value=0.7  Score=35.34  Aligned_cols=40  Identities=20%  Similarity=0.394  Sum_probs=26.3

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCcccc
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAY  306 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  306 (345)
                      .-+....+..-|.|+.|+..|+...++.         ..|.||.||...
T Consensus        99 ~~l~~e~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373        99 EKLEFETNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             HHHhhccCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            3334444566688888888887777664         257888888553

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=86.51  E-value=0.85  Score=35.63  Aligned_cols=39  Identities=26%  Similarity=0.588  Sum_probs=26.3

Q ss_pred             hhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccC
Q psy8793         260 KQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYK  307 (345)
Q Consensus       260 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  307 (345)
                      +....+..-|.|+.|+..|+...++.         ..|.|+.||....
T Consensus       109 l~~e~~~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        109 LEEEENNMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLE  147 (178)
T ss_pred             hhhccCCCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCe
Confidence            33344556688888888887776653         3688888886544

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=86.16  E-value=0.68  Score=32.66  Aligned_cols=30  Identities=23%  Similarity=0.671  Sum_probs=24.2

Q ss_pred             ccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccch
Q psy8793           8 YQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTY   48 (345)
Q Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~   48 (345)
                      ..|+.||..|-..           +..|..||.||..|.-.
T Consensus        10 R~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   10 RTCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             ccCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            4899999999652           23689999999999765

The function of members of this family is unknown.

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=84.91  E-value=0.62  Score=25.75  Aligned_cols=9  Identities=33%  Similarity=0.792  Sum_probs=3.6

Q ss_pred             cccccchhh
Q psy8793         325 YVCEICNKV  333 (345)
Q Consensus       325 ~~C~~C~~~  333 (345)
                      ..|+.|+..
T Consensus        26 v~C~~C~~~   34 (38)
T TIGR02098        26 VRCGKCGHV   34 (38)
T ss_pred             EECCCCCCE
Confidence            334444433

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=84.62  E-value=0.74  Score=25.34  Aligned_cols=8  Identities=38%  Similarity=1.244  Sum_probs=3.4

Q ss_pred             cCcCcccc
Q psy8793         271 CTKCDKVF  278 (345)
Q Consensus       271 C~~C~~~f  278 (345)
                      |+.|+..|
T Consensus         5 CP~C~~~f   12 (37)
T PF13719_consen    5 CPNCQTRF   12 (37)
T ss_pred             CCCCCceE
Confidence            44444444

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=84.48  E-value=0.71  Score=26.56  Aligned_cols=11  Identities=18%  Similarity=0.776  Sum_probs=5.9

Q ss_pred             eecCcCccccC
Q psy8793         269 FKCTKCDKVFQ  279 (345)
Q Consensus       269 ~~C~~C~~~f~  279 (345)
                      |.|..||..|.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            55555555553

present in RNA polymerase I, II and III

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=83.96  E-value=0.2  Score=40.52  Aligned_cols=22  Identities=18%  Similarity=0.437  Sum_probs=12.3

Q ss_pred             ceeecCcCccccCChHHHHHHH
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQ  288 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~  288 (345)
                      +.+.||+|+..|.+...+....
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~   25 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKI   25 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCc
Confidence            3456666666666555444443

>KOG2186|consensus

Probab=83.78  E-value=0.69  Score=37.38  Aligned_cols=44  Identities=25%  Similarity=0.621  Sum_probs=19.9

Q ss_pred             ccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHH
Q psy8793         241 VSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRH  287 (345)
Q Consensus       241 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H  287 (345)
                      |.|..|+.... +..+..|+...++ .-|-|-.|++.|.. ..+..|
T Consensus         4 FtCnvCgEsvK-Kp~vekH~srCrn-~~fSCIDC~k~F~~-~sYknH   47 (276)
T KOG2186|consen    4 FTCNVCGESVK-KPQVEKHMSRCRN-AYFSCIDCGKTFER-VSYKNH   47 (276)
T ss_pred             Eehhhhhhhcc-ccchHHHHHhccC-CeeEEeeccccccc-chhhhh
Confidence            44555554433 2334445544444 34455555555544 334444

>smart00531 TFIIE Transcription initiation factor IIE

Probab=83.57  E-value=1.4  Score=33.21  Aligned_cols=15  Identities=27%  Similarity=0.879  Sum_probs=8.0

Q ss_pred             CceeecCcCccccCC
Q psy8793         266 NEIFKCTKCDKVFQH  280 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~  280 (345)
                      ..-|.|+.|+..|..
T Consensus        97 ~~~Y~Cp~C~~~y~~  111 (147)
T smart00531       97 NAYYKCPNCQSKYTF  111 (147)
T ss_pred             CcEEECcCCCCEeeH
Confidence            344555555555543

>KOG2807|consensus

Probab=83.51  E-value=2.6  Score=35.57  Aligned_cols=25  Identities=20%  Similarity=0.453  Sum_probs=14.6

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhh
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h  319 (345)
                      ..|+|+.|...|=.--+..-|...|
T Consensus       344 ~~y~C~~Ck~~FCldCDv~iHesLh  368 (378)
T KOG2807|consen  344 GRYRCESCKNVFCLDCDVFIHESLH  368 (378)
T ss_pred             CcEEchhccceeeccchHHHHhhhh
Confidence            3466777766666555555554444

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=83.40  E-value=0.89  Score=22.76  Aligned_cols=21  Identities=19%  Similarity=0.487  Sum_probs=14.9

Q ss_pred             ccCCCCCCCCCCCchhHHHHhh
Q psy8793           8 YQCSQCPKAFNQKGNLKEHFRI   29 (345)
Q Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~   29 (345)
                      ..|++|++.+ ....+..|+..
T Consensus         2 v~CPiC~~~v-~~~~in~HLD~   22 (26)
T smart00734        2 VQCPVCFREV-PENLINSHLDS   22 (26)
T ss_pred             CcCCCCcCcc-cHHHHHHHHHH
Confidence            3688888888 45677777763

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=82.79  E-value=0.98  Score=34.52  Aligned_cols=25  Identities=24%  Similarity=0.717  Sum_probs=17.1

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCc
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCP  303 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  303 (345)
                      ++.|.|++||..+             -|+.|-+||.||
T Consensus       132 ~~~~vC~vCGy~~-------------~ge~P~~CPiCg  156 (166)
T COG1592         132 GKVWVCPVCGYTH-------------EGEAPEVCPICG  156 (166)
T ss_pred             CCEEEcCCCCCcc-------------cCCCCCcCCCCC
Confidence            3367888887655             346677788887

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=82.48  E-value=0.55  Score=27.32  Aligned_cols=31  Identities=16%  Similarity=0.592  Sum_probs=22.0

Q ss_pred             CCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCcccc
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFT   46 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~   46 (345)
                      ..|+|+.|+..|.-...          ...+.|+.||..+.
T Consensus         2 ~~y~C~~CG~~~~~~~~----------~~~~~Cp~CG~~~~   32 (46)
T PRK00398          2 AEYKCARCGREVELDEY----------GTGVRCPYCGYRIL   32 (46)
T ss_pred             CEEECCCCCCEEEECCC----------CCceECCCCCCeEE
Confidence            36899999999864211          11589999997653

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=82.03  E-value=0.48  Score=35.85  Aligned_cols=45  Identities=18%  Similarity=0.420  Sum_probs=27.6

Q ss_pred             ccCCCCCCCCCCC---chhHHHHhhhcCCCCccCCcCCccccchhhhcccc
Q psy8793           8 YQCSQCPKAFNQK---GNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSS   55 (345)
Q Consensus         8 ~~C~~C~~~f~~~---~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   55 (345)
                      ++||.|+-.+...   ..+..  .... .+.++|+.||++|++...+..=+
T Consensus         1 m~cp~c~~~~~~~~~s~~~~~--~~~~-~~~~~c~~c~~~f~~~e~~~~~~   48 (154)
T PRK00464          1 MRCPFCGHPDTRVIDSRPAED--GNAI-RRRRECLACGKRFTTFERVELVP   48 (154)
T ss_pred             CcCCCCCCCCCEeEeccccCC--CCce-eeeeeccccCCcceEeEeccCcc
Confidence            4799999876321   11111  0011 12389999999999877765544

>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Probab=81.77  E-value=0.53  Score=24.92  Aligned_cols=11  Identities=18%  Similarity=0.779  Sum_probs=5.8

Q ss_pred             eecCcCccccC
Q psy8793         269 FKCTKCDKVFQ  279 (345)
Q Consensus       269 ~~C~~C~~~f~  279 (345)
                      |.|..|+..+.
T Consensus         1 Y~C~~Cg~~~~   11 (32)
T PF03604_consen    1 YICGECGAEVE   11 (32)
T ss_dssp             EBESSSSSSE-
T ss_pred             CCCCcCCCeeE
Confidence            45666665554

Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=81.30  E-value=1.2  Score=24.32  Aligned_cols=9  Identities=22%  Similarity=1.032  Sum_probs=3.9

Q ss_pred             ecCcCcccc
Q psy8793         270 KCTKCDKVF  278 (345)
Q Consensus       270 ~C~~C~~~f  278 (345)
                      .|+.|+..|
T Consensus         4 ~Cp~C~~~y   12 (36)
T PF13717_consen    4 TCPNCQAKY   12 (36)
T ss_pred             ECCCCCCEE
Confidence            344444444

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=81.00  E-value=0.58  Score=26.31  Aligned_cols=31  Identities=23%  Similarity=0.657  Sum_probs=21.1

Q ss_pred             CccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCcc
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRK   44 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   44 (345)
                      .|+|..|+..|.-.....       ....-.|+.||..
T Consensus         5 ~y~C~~Cg~~fe~~~~~~-------~~~~~~CP~Cg~~   35 (41)
T smart00834        5 EYRCEDCGHTFEVLQKIS-------DDPLATCPECGGD   35 (41)
T ss_pred             EEEcCCCCCEEEEEEecC-------CCCCCCCCCCCCc
Confidence            388999999987432221       1345789999874

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>PF13878 zf-C2H2_3: zinc-finger of acetyl-transferase ESCO

Probab=80.53  E-value=1.2  Score=25.12  Aligned_cols=25  Identities=20%  Similarity=0.433  Sum_probs=19.0

Q ss_pred             CccCCCCCCCCC--CCchhHHHHhhhc
Q psy8793           7 QYQCSQCPKAFN--QKGNLKEHFRIHT   31 (345)
Q Consensus         7 ~~~C~~C~~~f~--~~~~l~~H~~~h~   31 (345)
                      .-+|+.|++.|.  ...+-..|.+-|.
T Consensus        13 ~~~C~~CgM~Y~~~~~eD~~~H~~yH~   39 (41)
T PF13878_consen   13 ATTCPTCGMLYSPGSPEDEKLHKKYHD   39 (41)
T ss_pred             CcCCCCCCCEECCCCHHHHHHHHHHHh
Confidence            468999999998  4566777777664

>TIGR02605 CxxC_CxxC_SSSS putative regulatory protein, FmdB family

Probab=80.46  E-value=0.63  Score=27.89  Aligned_cols=29  Identities=24%  Similarity=0.661  Sum_probs=20.0

Q ss_pred             ccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCc
Q psy8793           8 YQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSR   43 (345)
Q Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   43 (345)
                      |+|..|+..|.-...+      .. ...-.|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~~------~~-~~~~~CP~Cg~   34 (52)
T TIGR02605         6 YRCTACGHRFEVLQKM------SD-DPLATCPECGG   34 (52)
T ss_pred             EEeCCCCCEeEEEEec------CC-CCCCCCCCCCC
Confidence            8999999999743211      11 34577999986

This model represents a region of about 50 amino acids found in a number of small proteins in a wide range of bacteria. The region begins usually with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One member of this family is has been noted as a putative regulatory protein, designated FmdB (PubMed:8841393). Most members of this family have a C-terminal region containing highly degenerate sequence, such as SSTSESTKSSGSSGSSGSSESKASGSTEKSTSSTTAAAAV in Mycobacterium tuberculosis and VAVGGSAPAPSPAPRAGGGGGGCCGGGCCG in Streptomyces avermitilis. These low complexity regions, which are not included in the model, resemble low-complexity C-terminal regions of some heterocycle-containing bacteriocin precursors.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=80.39  E-value=1.7  Score=33.31  Aligned_cols=35  Identities=17%  Similarity=0.505  Sum_probs=28.5

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhc
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVL  334 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  334 (345)
                      ..+..-|.|+.|+..|+..-.+.         ..|.|+.||...
T Consensus       104 e~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373       104 ETNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             ccCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            34566799999999999888874         369999999863

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PHA00626 hypothetical protein

Probab=80.23  E-value=0.54  Score=28.11  Aligned_cols=12  Identities=25%  Similarity=0.600  Sum_probs=6.9

Q ss_pred             CcCCCCCccccC
Q psy8793         296 PYQCPQCPMAYK  307 (345)
Q Consensus       296 ~~~C~~C~~~f~  307 (345)
                      .|.|+.||+.|+
T Consensus        23 rYkCkdCGY~ft   34 (59)
T PHA00626         23 DYVCCDCGYNDS   34 (59)
T ss_pred             ceEcCCCCCeec
Confidence            455666665554

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	345
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		7e-22
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-12
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		5e-04
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		5e-04
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-11
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		1e-10
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-10
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-09
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		5e-09
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		6e-09
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-08
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-06
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		4e-08
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		9e-07
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-08
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-07
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		5e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		5e-08
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		5e-07
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-08
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-07
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-08
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		4e-07
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		5e-08
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		6e-07
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-08
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		4e-07
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		6e-08
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		5e-07
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		8e-08
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		2e-07
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		6e-04
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-07
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		7e-04
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-07
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		7e-04
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-07
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		6e-07
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		9e-07
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		1e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		2e-04
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		5e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		7e-06
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		8e-06
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		4e-05
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		5e-05
2yrj_A	46	Solution Structure Of The C2h2-Type Zinc Finger Dom		6e-05
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		7e-05
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		7e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		8e-05
2ytb_A	42	Solution Structure Of C2h2 Type Zinc Finger Domain		2e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		4e-04
2eog_A	44	Solution Structure Of The C2h2 Type Zinc Finger (Re		4e-04
2eq2_A	46	Solution Structure Of The 16th C2h2 Type Zinc Finge		7e-04
2ytf_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		7e-04
2yta_A	41	Solution Structure Of C2h2 Type Zinc Finger Domain		8e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  101 bits (251), Expect = 7e-22,   Method: Compositional matrix adjust.
 Identities = 57/198 (28%), Positives = 85/198 (42%), Gaps = 33/198 (16%)
Query: 148 GEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNK 207
           GEKP+ C  C K F  ++    H R H GEKP                            
Sbjct: 18  GEKPYACPECGKSFSRSDHLAEHQRTHTGEKP---------------------------- 49
Query: 208 PTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE 267
                + C +C K +S    LT+H +   G +P  C  C K F+  +++  H+++    +
Sbjct: 50  -----YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEK 104
Query: 268 IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
            + C +C K F  +  L  HQ  H   +PY+CP+C  ++    +L  H   HTG KPY C
Sbjct: 105 PYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKC 164
Query: 328 EICNKVLTHRSSLISHYR 345
             C K  + R +L  H R
Sbjct: 165 PECGKSFSRRDALNVHQR 182

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 70.1 bits (170), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 44/101 (43%), Positives = 56/101 (55%), Gaps = 6/101 (5%)
Query: 141 LHLKRHTGEKPHTC--ELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMR 198
           +H++RHTGEKPH C  E C K +   E+ K HLR H GEKP  C  E C++ F  +    
Sbjct: 57  VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRA 116
Query: 199 KHVRTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLG 237
           KH    H+  KP V + P   C K Y+  SSL KH+K   G
Sbjct: 117 KHQNRTHSNEKPYVCKLP--GCTKRYTDPSSLRKHVKTVHG 155

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 48/123 (39%), Gaps = 36/123 (29%)
Query: 170 HLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLT 229
           H+RRH GEKP  CTFE C                                K YS   +L 
Sbjct: 58  HMRRHTGEKPHKCTFEGC-------------------------------RKSYSRLENLK 86
Query: 230 KHMKARLGRQPVSC--DICHKEFTHPSSVLYHKQSIHNNE---IFKCTKCDKVFQHIQLL 284
            H+++  G +P  C  + C K F++ S    H+   H+NE   + K   C K +     L
Sbjct: 87  THLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSL 146
Query: 285 NRH 287
            +H
Sbjct: 147 RKH 149

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 42.0 bits (97), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 32/112 (28%), Positives = 51/112 (45%), Gaps = 12/112 (10%)
Query: 244 DICHKEFTHPSSVLYHKQSIHNNEIFK--------CTKCDKVFQHIQLLNRHQLVHMDTR 295
           D C +EF     +++H  S H +   K        C++  + F+   +L  H   H   +
Sbjct: 7   DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEK 66
Query: 296 PYQC--PQCPMAYKTNISLSAHLMKHTGAKPYVC--EICNKVLTHRSSLISH 343
           P++C    C  +Y    +L  HL  HTG KPY+C  E C+K  ++ S    H
Sbjct: 67  PHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKH 118

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 65.9 bits (159), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 30/77 (38%), Positives = 41/77 (53%)
Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
           F C  C K F+    L+ H L+H DTRPY C  C   +     +  H   HTG KP+ C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61
Query: 329 ICNKVLTHRSSLISHYR 345
           +C K  +  S+LI+H R
Sbjct: 62  VCGKAFSQSSNLITHSR 78

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 63.9 bits (154), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 38/77 (49%)
Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
           +KC +C K F     L +HQ  H   +PY+CP+C  ++  +  L  H   HTG KPY C 
Sbjct: 5   YKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPYKCP 64
Query: 329 ICNKVLTHRSSLISHYR 345
            C K  +    L  H R
Sbjct: 65  ECGKSFSRSDHLSRHQR 81

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 62.0 bits (149), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 28/77 (36%), Positives = 41/77 (53%), Gaps = 2/77 (2%)
Query: 271 CTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTG--AKPYVCE 328
           C  C K+F+ +  LNRH+L H   +PY CP C + +K    +S H+  H G   KPY+C+
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 329 ICNKVLTHRSSLISHYR 345
            C K  +    L  H +
Sbjct: 70  SCGKGFSRPDHLNGHIK 86

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 60.1 bits (144), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 36/102 (35%), Positives = 51/102 (50%), Gaps = 5/102 (4%)
Query: 246 CHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQC--PQCP 303
           C K F   S++  H  + H   +  C +C K F     L RHQLVH   +P+QC    C 
Sbjct: 13  CTKMFRDNSAMRKHLHT-HGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCG 71
Query: 304 MAYKTNISLSAHLMKHTGAKPYVC--EICNKVLTHRSSLISH 343
             +  + +L  H+  HTG +PYVC  + CNK     ++L SH
Sbjct: 72  KRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSH 113

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 58.5 bits (140), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 31/46 (67%)
Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTT 47
          H G K +QC  C + F+Q+ +L  H R HTGEKPF C+IC RKF T
Sbjct: 29 HTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGRKFAT 74

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNK 332
           CD+ F     L+ H  +H   +P+QC  C   +    SL+AH+  HTG KP+ C+IC +
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEKPFACDICGR 70

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 58.5 bits (140), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/79 (36%), Positives = 39/79 (49%), Gaps = 1/79 (1%)
Query: 265 NNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKP 324
            ++++ C +C K F H    +RH  +H+  RPY C  C   +K    L  H+  HTG KP
Sbjct: 7   GDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKP 65
Query: 325 YVCEICNKVLTHRSSLISH 343
           Y C IC K    R S   H
Sbjct: 66  YECNICAKRFMWRDSFHRH 84

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 57.0 bits (136), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 25/46 (54%), Positives = 30/46 (65%)
Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTT 47
          H G K +QC  C + F+Q   L +H R HTGEKPF C+IC RKF T
Sbjct: 29 HTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGRKFAT 74

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 49.7 bits (117), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 20/59 (33%), Positives = 32/59 (54%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNK 332
           CD+ F     L+ H  +H   +P+QC  C   +  +  L+ H+  HTG KP+ C+IC +
Sbjct: 12  CDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEKPFACDICGR 70

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 55.5 bits (132), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 5/105 (4%)
Query: 157 CSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCD 216
           C+K +      + H R+H GEKP  C F++C   F  S  +++H R       V  F C 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR---RHTGVKPFQCK 70
Query: 217 KCEKVYSCASSLTKHMKARLGRQPVSCDI--CHKEFTHPSSVLYH 259
            C++ +S +  L  H +   G +P SC    C K+F     ++ H
Sbjct: 71  TCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH 115

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 50.8 bits (120), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 33/129 (25%), Positives = 44/129 (34%), Gaps = 28/129 (21%)
Query: 218 CEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKV 277
           C K Y   S L  H +   G +P  CD                             C++ 
Sbjct: 14  CNKRYFKLSHLQMHSRKHTGEKPYQCDF--------------------------KDCERR 47
Query: 278 FQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI--CNKVLT 335
           F     L RHQ  H   +P+QC  C   +  +  L  H   HTG KP+ C    C K   
Sbjct: 48  FSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFA 107
Query: 336 HRSSLISHY 344
               L+ H+
Sbjct: 108 RSDELVRHH 116

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
          H G K +QC  C + F++  +L  H R HTGEKPF C+IC RKF    + +R +    R 
Sbjct: 29 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNK 332
           CD+ F     L RH  +H   +P+QC  C   +  +  L+ H+  HTG KP+ C+IC +
Sbjct: 12  CDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 27/82 (32%), Positives = 41/82 (50%)
Query: 240 PVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQC 299
           P  C++C K F+    +  H +     + +KC  CD        LN+H  +H D RP++C
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 300 PQCPMAYKTNISLSAHLMKHTG 321
             CP A + +  L+ HL  HTG
Sbjct: 68  QICPYASRNSSQLTVHLRSHTG 89

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 55.5 bits (132), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
          H G K +QC  C + F++  +L  H R HTGEKPF C+IC RKF    + +R +    R 
Sbjct: 29 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNK 332
           CD+ F     L RH  +H   +P+QC  C   +  +  L+ H+  HTG KP+ C+IC +
Sbjct: 12  CDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/59 (42%), Positives = 34/59 (57%)
Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSAR 60
          H G K +QC  C + F++  +L  H R HTGEKPF C+IC RKF    + +R +    R
Sbjct: 29 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLR 87

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 52.4 bits (124), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNK 332
           CD+ F     L RH  +H   +P+QC  C   +  +  L+ H+  HTG KP+ C+IC +
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
          H G K +QC  C + F++  +L  H R HTGEKPF C+IC RKF    + +R +    R 
Sbjct: 29 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNK 332
           CD+ F     L RH  +H   +P+QC  C   +  +  L+ H+  HTG KP+ C+IC +
Sbjct: 12  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          H G K +QC  C + F++  +L  H R HTGEKPF C+IC RKF    + +R
Sbjct: 29 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR 80

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNK 332
           CD+ F     L RH  +H   +P+QC  C   +  +  L+ H+  HTG KP+ C+IC +
Sbjct: 12  CDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 55.1 bits (131), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
          H G K +QC  C + F++  +L  H R HTGEKPF C+IC RKF    + +R +    R 
Sbjct: 28 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ 87

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 52.4 bits (124), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNK 332
           CD+ F     L RH  +H   +P+QC  C   +  +  L+ H+  HTG KP+ C+IC +
Sbjct: 11  CDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 69

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 55.1 bits (131), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 25/60 (41%), Positives = 34/60 (56%)
Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN 61
          H G K +QC  C + F++  +L  H R HTGEKPF C+IC RKF    + +R +    R 
Sbjct: 29 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQ 88

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 21/59 (35%), Positives = 32/59 (54%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNK 332
           CD+ F     L RH  +H   +P+QC  C   +  +  L+ H+  HTG KP+ C+IC +
Sbjct: 12  CDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 54.7 bits (130), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 28/62 (45%), Positives = 34/62 (54%), Gaps = 2/62 (3%)
Query: 142 HLKRHTGEKPHTCEL--CSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRK 199
           H++ HTGEKP  C    C K F  +E+ K H R H GEKP  C FE C   F  S   +K
Sbjct: 81  HIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKK 140
Query: 200 HV 201
           H+
Sbjct: 141 HM 142

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 43/125 (34%), Positives = 56/125 (44%), Gaps = 5/125 (4%)
Query: 142 HLKRHTGEKPHTC--ELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRK 199
           HL +HTGEKP  C  E C KGF S      H   H GEK  TC  + C   F     M+K
Sbjct: 33  HLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK 92
Query: 200 HVRTCHN-KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSC--DICHKEFTHPSSV 256
           H    HN K  V     + C K +   + L  H  +   + P  C  + C K F+ PS +
Sbjct: 93  HFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRL 152
Query: 257 LYHKQ 261
             H++
Sbjct: 153 KRHEK 157

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 41.6 bits (96), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 43/173 (24%), Positives = 59/173 (34%), Gaps = 39/173 (22%)
Query: 157 CSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCD 216
           C   +      + HL +H GEKP  C  E                               
Sbjct: 20  CGAAYNKNWKLQAHLCKHTGEKPFPCKEEG------------------------------ 49
Query: 217 KCEKVYSCASSLTKHMKARLGRQPVSCDI--CHKEFTHPSSVLYHKQSIHNNEI--FKC- 271
            CEK ++    LT+H     G +  +CD   C   FT  +++  H    HN +I  + C 
Sbjct: 50  -CEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCH 108
Query: 272 -TKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTG 321
              C K F+    L  HQ  H    PY+CP   C   +     L  H   H G
Sbjct: 109 FENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 152 HTCEL--CSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPT 209
           HTC+   C K +  +   K HLR H GEKP  C ++ C   F  S  + +H R    K T
Sbjct: 7   HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR----KHT 62
Query: 210 VNR-FPCDKCEKVYSCASSLTKHMK 233
            +R F C KC++ +S +  L  HMK
Sbjct: 63  GHRPFQCQKCDRAFSRSDHLALHMK 87

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGAKPYVCEICN 331
           C K +     L  H   H   +PY C    C   +  +  L+ H  KHTG +P+ C+ C+
Sbjct: 14  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 73
Query: 332 KVLTHRSSLISH 343
           +  +    L  H
Sbjct: 74  RAFSRSDHLALH 85

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 32/85 (37%), Positives = 44/85 (51%), Gaps = 7/85 (8%)
Query: 152 HTCEL--CSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPT 209
           HTC+   C K +  +   K HLR H GEKP  C ++ C   F  S  + +H R    K T
Sbjct: 6   HTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR----KHT 61
Query: 210 VNR-FPCDKCEKVYSCASSLTKHMK 233
            +R F C KC++ +S +  L  HMK
Sbjct: 62  GHRPFQCQKCDRAFSRSDHLALHMK 86

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGAKPYVCEICN 331
           C K +     L  H   H   +PY C    C   +  +  L+ H  KHTG +P+ C+ C+
Sbjct: 13  CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCD 72
Query: 332 KVLTHRSSLISH 343
           +  +    L  H
Sbjct: 73  RAFSRSDHLALH 84

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 53.1 bits (126), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 31/49 (63%)
Query: 5  IKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          +K +QC  C + F++  +L  H R HTGEKPF C+IC RKF    + +R
Sbjct: 1  MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR 49

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 51.6 bits (122), Expect = 6e-07,   Method: Compositional matrix adjust.
 Identities = 31/110 (28%), Positives = 48/110 (43%), Gaps = 3/110 (2%)
Query: 237 GRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRP 296
           G   V C  CHK+F     +  H +     + F+C KC K +   + L  H+  +   R 
Sbjct: 4   GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRS 63
Query: 297 YQ---CPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH 343
            Q   C  C   ++  + L  H++ HTG  PY C  C++    +  L SH
Sbjct: 64  EQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 51.2 bits (121), Expect = 9e-07,   Method: Compositional matrix adjust.
 Identities = 22/53 (41%), Positives = 30/53 (56%)
Query: 293 DTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           + R Y+C +C  ++  +  LS H   HTG KPY C+ C K    RS LI H+R
Sbjct: 15  ERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHR 67

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 50.8 bits (120), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 30/47 (63%)
Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVR 52
          K Y+C +C  +F  KGNL  H  +HTGEKP+ CNIC  +F   + ++
Sbjct: 16 KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 43.5 bits (101), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/51 (35%), Positives = 30/51 (58%)
Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +PY+C +C  +++   +L++H   HTG KPY C IC       ++L +H R
Sbjct: 16  KPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTR 66

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 48.5 bits (114), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 29/67 (43%), Positives = 32/67 (47%), Gaps = 2/67 (2%)
Query: 142 HLKRHTGEKPHTC--ELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRK 199
           HL +HTGEKP  C  E C KGF S      H   H GEK  TC  + C   F     M+K
Sbjct: 24  HLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK 83
Query: 200 HVRTCHN 206
           H    HN
Sbjct: 84  HFNRFHN 90

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 48.1 bits (113), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 29/84 (34%), Positives = 39/84 (46%), Gaps = 5/84 (5%)
Query: 152 HTCEL--CSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPT 209
           H C+   C+K +  +   K HLR H GEKP  CT+E C   F  S  + +H R       
Sbjct: 16  HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR---KHTG 72
Query: 210 VNRFPCDKCEKVYSCASSLTKHMK 233
              F C  C + +S +  L  HMK
Sbjct: 73  AKPFQCGVCNRSFSRSDHLALHMK 96

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 48.1 bits (113), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 24/74 (32%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
Query: 274 CDKVFQHIQLLNRHQLVHMDTRPYQC--PQCPMAYKTNISLSAHLMKHTGAKPYVCEICN 331
           C KV+     L  H   H   +PY+C    C   +  +  L+ H  KHTGAKP+ C +CN
Sbjct: 23  CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCN 82
Query: 332 KVLTHRSSLISHYR 345
           +  +    L  H +
Sbjct: 83  RSFSRSDHLALHMK 96

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 45.4 bits (106), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 26/86 (30%), Positives = 41/86 (47%)
Query: 209 TVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI 268
           T   F C  C + ++ + +L  H +     +P +CDICHK F     +  H+      + 
Sbjct: 14  TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKP 73
Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDT 294
           FKC +C K F   + L  H+ +HM T
Sbjct: 74  FKCQECGKGFCQSRTLAVHKTLHMQT 99

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 42.4 bits (98), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 32/75 (42%)
Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
           F C  C + F     L  H+  H D RPY C  C  A++    L  H   H+  KP+ C+
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQ 77
Query: 329 ICNKVLTHRSSLISH 343
            C K      +L  H
Sbjct: 78  ECGKGFCQSRTLAVH 92

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 45.4 bits (106), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 18/39 (46%), Positives = 27/39 (69%)
Query: 8  YQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFT 46
          + C  C +AF ++ +LK H+R HT EKP+ C +C+R FT
Sbjct: 3  FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFT 41

>pdb|2YRJ|A Chain A, Solution Structure Of The C2h2-Type Zinc Finger Domain (781- 813) From Zinc Finger Protein 473 Length = 46

Iteration: 1
 Score = 45.1 bits (105), Expect = 6e-05,   Method: Compositional matrix adjust.
 Identities = 20/30 (66%), Positives = 23/30 (76%)
Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTGEKP 35
          K Y+C +C KAF QK NL +H RIHTGEKP
Sbjct: 11 KPYRCGECGKAFAQKANLTQHQRIHTGEKP 40

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 45.1 bits (105), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQV 51
          K Y C +C KAF++   L +H R+HTGEKP+ C  C + F+  S +
Sbjct: 13 KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGL 58

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 44.7 bits (104), Expect = 7e-05,   Method: Compositional matrix adjust.
 Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +PY C +C  A+  +  L  H   HTG KPY C  C K  +  S LI+H R
Sbjct: 13  KPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQR 63

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 44.7 bits (104), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 19/44 (43%), Positives = 26/44 (59%), Gaps = 2/44 (4%)
Query: 5  IKQYQC--SQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFT 46
          ++ Y C    C + F++   L  H RIHTG+KPF C IC R F+
Sbjct: 17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFS 60

>pdb|2YTB|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 5 In Zinc Finger Protein 32 Length = 42

Iteration: 1
 Score = 43.1 bits (100), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTGEKP 35
          K Y+C QC KAF+QKG+L  H R+HTG  P
Sbjct: 10 KPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/46 (39%), Positives = 25/46 (54%)
Query: 298 QCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH 343
           +C  C   +++N  L+ HL  HTG KPY CE C      ++SL  H
Sbjct: 6   ECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYH 51

>pdb|2EOG|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 693- 723) Of Human Zinc Finger Protein 268 Length = 44

Iteration: 1
 Score = 42.4 bits (98), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 3  QGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKP 35
           G+K Y CS+C KAF  K  L  H R HTGEKP
Sbjct: 6  SGVKPYGCSECGKAFRSKSYLIIHMRTHTGEKP 38

>pdb|2EQ2|A Chain A, Solution Structure Of The 16th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 22/30 (73%)
Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTGEKP 35
          K YQC++C KAF+Q   L  H R+HTGEKP
Sbjct: 11 KPYQCNECGKAFSQTSKLARHQRVHTGEKP 40

>pdb|2YTF|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 607- 639) Of Human Zinc Finger Protein 268 Length = 46

Iteration: 1
 Score = 41.6 bits (96), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 19/30 (63%), Positives = 22/30 (73%)
Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTGEKP 35
          K ++CS+C KAFN K NL  H R HTGEKP
Sbjct: 11 KPFECSECQKAFNTKSNLIVHQRTHTGEKP 40

>pdb|2YTA|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 3 In Zinc Finger Protein 32 Length = 41

Iteration: 1
 Score = 41.2 bits (95), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 17/32 (53%), Positives = 23/32 (71%)
Query: 4  GIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKP 35
          G K YQC +C K+F+Q+G+L  H R+HTG  P
Sbjct: 7  GEKPYQCKECGKSFSQRGSLAVHERLHTGSGP 38

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	345
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-31
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-21
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-20
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-12
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-08
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	1e-06
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-05
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	7e-05
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-24
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-10
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-09
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-08
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-18
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-17
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	6e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	8e-14
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-13
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	4e-12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-12
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-08
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	1e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	5e-04
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-17
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-14
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-14
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	5e-13
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	7e-13
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	8e-13
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-11
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	6e-11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	5e-17
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-11
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-10
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	3e-09
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-08
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-04
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-15
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	3e-13
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	7e-10
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-09
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-08
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	5e-04
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	9e-17
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-14
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-12
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	3e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	8e-11
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-09
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-08
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	6e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	3e-16
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-13
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-09
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	8e-07
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-06
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-04
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-15
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-13
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	9e-12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-11
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-11
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-07
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-04
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-15
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-14
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-13
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-11
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	9e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	4e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-15
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-11
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-11
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-09
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-07
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-04
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	4e-04
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-15
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-13
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	3e-11
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-10
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-08
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-15
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	9e-14
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-11
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	7e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-06
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	4e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	4e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-12
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	9e-09
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-14
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-10
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-09
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-08
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	4e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-05
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-05
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-11
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-10
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	4e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-14
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-08
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	3e-06
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-04
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	8e-04
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-14
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-11
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-09
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-08
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-05
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-13
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-10
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-09
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-08
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-06
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-05
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	3e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-13
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	8e-07
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-06
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-04
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-04
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-11
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-09
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-08
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	6e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-07
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	4e-13
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-08
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-04
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-04
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	4e-13
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-11
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-08
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	9e-06
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-05
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	9e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-13
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	6e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	7e-13
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-07
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-04
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	8e-04
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-10
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-07
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-06
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	4e-04
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-12
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	6e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-09
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-05
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	8e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-12
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-12
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-05
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	3e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-12
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-12
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-12
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-06
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-12
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-12
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-12
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-12
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-12
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-10
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	5e-08
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-12
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-04
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-12
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-12
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-05
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-04
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-12
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-04
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-12
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-12
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-12
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-12
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-12
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-12
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-12
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-12
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	7e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-12
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-12
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-12
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-04
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-12
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-12
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-12
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-12
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-12
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-12
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-04
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-12
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	7e-12
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-06
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-04
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	6e-04
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-12
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-04
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-12
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-12
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	8e-12
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	6e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	2e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-12
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-04
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-04
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	7e-04
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-12
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	9e-12
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	9e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	9e-12
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-06
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	4e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	1e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-04
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	9e-12
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-07
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	7e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	9e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	8e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-12
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-05
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-12
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-05
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-11
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-06
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-04
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-04
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-04
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-04
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-11
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-05
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-11
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-11
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	4e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-11
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-04
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-11
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-05
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-05
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-04
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-11
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-11
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-04
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	8e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-04
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-11
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-05
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	3e-11
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-04
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-04
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-11
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-11
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-11
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	3e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-04
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	5e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	8e-08
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-05
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	9e-09
2epa_A	72	Krueppel-like factor 10; transforming growth facto	1e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-04
2epa_A	72	Krueppel-like factor 10; transforming growth facto	4e-04
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	4e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-08
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	9e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-05
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	7e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-09
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	5e-08
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-08
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	1e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-04
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	4e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	7e-06
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	6e-05
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-04
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	7e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	3e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	7e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	1e-05
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	8e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	4e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-04
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	4e-05
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	6e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	2e-04
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	3e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  116 bits (294), Expect = 1e-31
 Identities = 60/205 (29%), Positives = 84/205 (40%), Gaps = 35/205 (17%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
                 GEKP+ C  C K F  ++    H R H GEKP                      
Sbjct: 12  QAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKP---------------------- 49

Query: 202 RTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQ 261
                      + C +C K +S    LT+H +   G +P  C  C K F+  +++  H Q
Sbjct: 50  -----------YKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH-Q 97

Query: 262 SIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHT 320
             H  E  + C +C K F  +  L  HQ  H   +PY+CP+C  ++    +L  H   HT
Sbjct: 98  RTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT 157

Query: 321 GAKPYVCEICNKVLTHRSSLISHYR 345
           G KPY C  C K  + R +L  H R
Sbjct: 158 GEKPYKCPECGKSFSRRDALNVHQR 182

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 87.9 bits (219), Expect = 6e-21
 Identities = 54/153 (35%), Positives = 72/153 (47%), Gaps = 11/153 (7%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
           H + HTGEKP+ C  C K F   +    H R H GEKP  C    C ++F +   +R H 
Sbjct: 40  HQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCP--ECGKSFSQRANLRAHQ 97

Query: 202 RTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYH 259
           RT H   KP    + C +C K +S  + L  H +   G +P  C  C K F+   ++  H
Sbjct: 98  RT-HTGEKP----YACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTH 152

Query: 260 KQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVH 291
            Q  H  E  +KC +C K F     LN HQ  H
Sbjct: 153 -QRTHTGEKPYKCPECGKSFSRRDALNVHQRTH 184

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 85.2 bits (212), Expect = 6e-20
 Identities = 42/121 (34%), Positives = 58/121 (47%), Gaps = 2/121 (1%)

Query: 226 SSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLL 284
           SS         G +P +C  C K F+    +  H Q  H  E  +KC +C K F   + L
Sbjct: 7   SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEH-QRTHTGEKPYKCPECGKSFSDKKDL 65

Query: 285 NRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHY 344
            RHQ  H   +PY+CP+C  ++    +L AH   HTG KPY C  C K  +  + L +H 
Sbjct: 66  TRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQ 125

Query: 345 R 345
           R
Sbjct: 126 R 126

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 65.5 bits (161), Expect = 7e-13
 Identities = 21/52 (40%), Positives = 30/52 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
            G K Y C +C K+F++  +L EH R HTGEKP+ C  C + F+    + R
Sbjct: 16 EPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTR 67

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 64.8 bits (159), Expect = 1e-12
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
           H G K Y+C +C K+F+++ NL  H R HTGEKP+ C  C + F+    +  
Sbjct: 128 HTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNV 179

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 64.8 bits (159), Expect = 1e-12
 Identities = 23/52 (44%), Positives = 34/52 (65%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
           H G K Y+C +C K+F+Q+ NL+ H R HTGEKP+ C  C + F+  + +R 
Sbjct: 72  HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRA 123

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 64.4 bits (158), Expect = 2e-12
 Identities = 21/52 (40%), Positives = 30/52 (57%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
           H G K Y C +C K+F+Q  +L+ H R HTGEKP+ C  C + F+    +  
Sbjct: 100 HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHT 151

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 64.0 bits (157), Expect = 2e-12
 Identities = 22/52 (42%), Positives = 32/52 (61%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          H G K Y+C +C K+F+ K +L  H R HTGEKP+ C  C + F+  + +R 
Sbjct: 44 HTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRA 95

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 52.8 bits (128), Expect = 2e-08
 Identities = 15/34 (44%), Positives = 22/34 (64%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKP 35
           H G K Y+C +C K+F+++  L  H R HTG+K 
Sbjct: 156 HTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 47.4 bits (114), Expect = 1e-06
 Identities = 7/38 (18%), Positives = 14/38 (36%)

Query: 16 AFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          +     +      +  GEKP+ C  C + F+    +  
Sbjct: 2  SEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAE 39

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 43.6 bits (104), Expect = 2e-05
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKP 179
           H + HTGEKP+ C  C K F   ++   H R H G+K 
Sbjct: 152 HQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 42.0 bits (100), Expect = 7e-05
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 304 MAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           ++   + S  A      G KPY C  C K  +    L  H R
Sbjct: 1   ISEFGSSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQR 42

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 96.5 bits (241), Expect = 4e-24
 Identities = 45/217 (20%), Positives = 68/217 (31%), Gaps = 47/217 (21%)

Query: 142 HLKRHTGEKPHTCEL--CSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRK 199
                   K + C    C   +      + HL +H GEKP  C  E C + F     + +
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 200 HVRTCHN--KPTVNRFPCD--KCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSS 255
           H  T H   K     F CD   C+  ++  +++ KH                        
Sbjct: 63  HSLT-HTGEKN----FTCDSDGCDLRFTTKANMKKHFN---------------------- 95

Query: 256 VLYHKQSIHNNE---IFKCTK--CDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMAYKT 308
                    +N    ++ C    C K F+    L  HQ  H    PY+CP   C   +  
Sbjct: 96  -------RFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSL 148

Query: 309 NISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
              L  H   H G      + C+ V    +  + H  
Sbjct: 149 PSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKHVA 185

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 70.3 bits (173), Expect = 1e-14
 Identities = 37/132 (28%), Positives = 51/132 (38%), Gaps = 13/132 (9%)

Query: 142 HLKRHTGEKPHTCE--LCSKGFLSAESYKCHLRRHKGEK--PVTCTFENCTETFVESWAM 197
           H   HTGEK  TC+   C   F +  + K H  R    K     C FENC + F +   +
Sbjct: 63  HSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQL 122

Query: 198 RKHVRTCHN--KPTVNRFPC--DKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHP 253
           + H  + H    P    + C  + C+K +S  S L +H K   G      D C       
Sbjct: 123 KVHQFS-HTQQLP----YECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTW 177

Query: 254 SSVLYHKQSIHN 265
           +  L H    H 
Sbjct: 178 TLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 58.8 bits (143), Expect = 1e-10
 Identities = 21/56 (37%), Positives = 30/56 (53%), Gaps = 4/56 (7%)

Query: 2  HQGIKQYQCSQ--CPKAFNQKGNLKEHFRIHTGEKPFTCN--ICSRKFTTYSQVRR 53
          H G K + C +  C K F    +L  H   HTGEK FTC+   C  +FTT + +++
Sbjct: 37 HTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKK 92

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 57.2 bits (139), Expect = 5e-10
 Identities = 21/56 (37%), Positives = 28/56 (50%), Gaps = 4/56 (7%)

Query: 2  HQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCN--ICSRKFTTYSQVRR 53
              K+Y CS   C  A+N+   L+ H   HTGEKPF C    C + FT+   + R
Sbjct: 7  PVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 54.9 bits (133), Expect = 3e-09
 Identities = 19/58 (32%), Positives = 28/58 (48%), Gaps = 6/58 (10%)

Query: 2   HQGIKQ--YQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCN--ICSRKFTTYSQVRR 53
              IK   Y C    C KAF +   LK H   HT + P+ C    C ++F+  S+++R
Sbjct: 97  FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKR 154

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 53.4 bits (129), Expect = 1e-08
 Identities = 16/55 (29%), Positives = 24/55 (43%), Gaps = 6/55 (10%)

Query: 2   HQGIKQYQCSQ--CPKAFNQKGNLKEHFRIHTGEK--PFTCNI--CSRKFTTYSQ 50
           H G K + C    C   F  K N+K+HF      K   + C+   C + F  ++Q
Sbjct: 67  HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 53.0 bits (128), Expect = 1e-08
 Identities = 14/55 (25%), Positives = 22/55 (40%), Gaps = 2/55 (3%)

Query: 2   HQGIKQYQCSQ--CPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRS 54
           H     Y+C    C K F+    LK H ++H G      + CS    T++   + 
Sbjct: 129 HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYLKH 183

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 79.5 bits (197), Expect = 1e-18
 Identities = 31/111 (27%), Positives = 49/111 (44%), Gaps = 5/111 (4%)

Query: 237 GRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLLNRHQ---LVHM 292
           G   V C  CHK+F     +  H    H  E  F+C KC K +   + L  H+    ++ 
Sbjct: 4   GSSGVECPTCHKKFLSKYYLKVH-NRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNR 62

Query: 293 DTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH 343
             + + C  C   ++  + L  H++ HTG  PY C  C++    +  L SH
Sbjct: 63  SEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSH 113

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 76.4 bits (189), Expect = 2e-17
 Identities = 31/126 (24%), Positives = 47/126 (37%), Gaps = 10/126 (7%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCH 205
            +G     C  C K FLS    K H R+H GEKP  C    C + +     + +H     
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECP--KCGKCYFRKENLLEHEARNC 59

Query: 206 ----NKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQ 261
                +     F C  C++ +     L  HM +  G  P  C  C ++F     +  H  
Sbjct: 60  MNRSEQV----FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115

Query: 262 SIHNNE 267
            +H+  
Sbjct: 116 KLHSGP 121

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 66.8 bits (164), Expect = 6e-14
 Identities = 19/80 (23%), Positives = 31/80 (38%), Gaps = 3/80 (3%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK---HTGAKPY 325
            +C  C K F     L  H   H   +P++CP+C   Y    +L  H  +   +   + +
Sbjct: 8   VECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVF 67

Query: 326 VCEICNKVLTHRSSLISHYR 345
            C +C +    R  L  H  
Sbjct: 68  TCSVCQETFRRRMELRLHMV 87

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 66.4 bits (163), Expect = 8e-14
 Identities = 15/52 (28%), Positives = 29/52 (55%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
           ++  + + CS C + F ++  L+ H   HTGE P+ C+ CS++F     ++ 
Sbjct: 61  NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQS 112

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 65.6 bits (161), Expect = 1e-13
 Identities = 19/52 (36%), Positives = 23/52 (44%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
            G    +C  C K F  K  LK H R HTGEKPF C  C + +     +  
Sbjct: 2  SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLE 53

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 61.8 bits (151), Expect = 4e-12
 Identities = 33/111 (29%), Positives = 47/111 (42%), Gaps = 22/111 (19%)

Query: 132 SHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHK-------GEKPVTCTF 184
             K YL  K+H ++HTGEKP  C  C K +      K +L  H+        E+  TC+ 
Sbjct: 18  LSKYYL--KVHNRKHTGEKPFECPKCGKCY----FRKENLLEHEARNCMNRSEQVFTCS- 70

Query: 185 ENCTETFVESWAMRKHVRTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMK 233
             C ETF     +R H+ + H    P    + C  C + +     L  HM 
Sbjct: 71  -VCQETFRRRMELRLHMVS-HTGEMP----YKCSSCSQQFMQKKDLQSHMI 115

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 61.0 bits (149), Expect = 7e-12
 Identities = 18/55 (32%), Positives = 30/55 (54%), Gaps = 3/55 (5%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFR---IHTGEKPFTCNICSRKFTTYSQVRR 53
          H G K ++C +C K + +K NL EH     ++  E+ FTC++C   F    ++R 
Sbjct: 30 HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRL 84

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 51.7 bits (125), Expect = 1e-08
 Identities = 16/51 (31%), Positives = 23/51 (45%)

Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
              +CP C   + +   L  H  KHTG KP+ C  C K    + +L+ H  
Sbjct: 6   SGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEA 56

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 48.7 bits (117), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 20/34 (58%), Gaps = 1/34 (2%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEH-FRIHTGEK 34
           H G   Y+CS C + F QK +L+ H  ++H+G  
Sbjct: 89  HTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 38.6 bits (91), Expect = 5e-04
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 9/43 (20%)

Query: 141 LHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHK-----GEK 178
           LH+  HTGE P+ C  CS+ F      K  L+ H      G  
Sbjct: 84  LHMVSHTGEMPYKCSSCSQQF----MQKKDLQSHMIKLHSGPS 122

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 76.4 bits (189), Expect = 2e-17
 Identities = 36/124 (29%), Positives = 59/124 (47%), Gaps = 12/124 (9%)

Query: 147 TGEKPHTCE--LCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTC 204
           + ++P  C    C+K +      + H R+H GEKP  C F++C   F  S  +++H R  
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR- 60

Query: 205 HN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDI--CHKEFTHPSSVLYHK 260
           H   KP    F C  C++ +S +  L  H +   G +P SC    C K+F     ++ H 
Sbjct: 61  HTGVKP----FQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRH- 115

Query: 261 QSIH 264
            ++H
Sbjct: 116 HNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 67.5 bits (166), Expect = 3e-14
 Identities = 23/54 (42%), Positives = 33/54 (61%), Gaps = 2/54 (3%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNI--CSRKFTTYSQVRR 53
           H G+K +QC  C + F++  +LK H R HTGEKPF+C    C +KF    ++ R
Sbjct: 61  HTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVR 114

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 67.5 bits (166), Expect = 3e-14
 Identities = 30/105 (28%), Positives = 44/105 (41%), Gaps = 6/105 (5%)

Query: 246 CHKEFTHPSSVLYHKQSIHNNE-IFKCTK--CDKVFQHIQLLNRHQLVHMDTRPYQCPQC 302
           C+K +   S +  H    H  E  ++C    C++ F     L RHQ  H   +P+QC  C
Sbjct: 14  CNKRYFKLSHLQMH-SRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTC 72

Query: 303 PMAYKTNISLSAHLMKHTGAKPYVCEI--CNKVLTHRSSLISHYR 345
              +  +  L  H   HTG KP+ C    C K       L+ H+ 
Sbjct: 73  QRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHN 117

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 64.1 bits (157), Expect = 5e-13
 Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 13/100 (13%)

Query: 140 KLHLKRHTGEKPHTCEL--CSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAM 197
           ++H ++HTGEKP+ C+   C + F  ++  K H RRH G KP  C  + C   F  S  +
Sbjct: 25  QMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC--KTCQRKFSRSDHL 82

Query: 198 RKHVRTCHN--KPTVNRFPCDK--CEKVYSCASSLTKHMK 233
           + H RT H   KP    F C    C+K ++ +  L +H  
Sbjct: 83  KTHTRT-HTGEKP----FSCRWPSCQKKFARSDELVRHHN 117

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 63.7 bits (156), Expect = 7e-13
 Identities = 24/64 (37%), Positives = 35/64 (54%)

Query: 140 KLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRK 199
           K H +RHTG KP  C+ C + F  ++  K H R H GEKP +C + +C + F  S  + +
Sbjct: 55  KRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVR 114

Query: 200 HVRT 203
           H   
Sbjct: 115 HHNM 118

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 63.3 bits (155), Expect = 8e-13
 Identities = 23/50 (46%), Positives = 27/50 (54%), Gaps = 2/50 (4%)

Query: 2  HQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS 49
          H G K YQC    C + F++   LK H R HTG KPF C  C RKF+   
Sbjct: 31 HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSD 80

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 59.5 bits (145), Expect = 2e-11
 Identities = 24/81 (29%), Positives = 36/81 (44%), Gaps = 4/81 (4%)

Query: 269 FKCT--KCDKVFQHIQLLNRHQLVHMDTRPYQC--PQCPMAYKTNISLSAHLMKHTGAKP 324
           F C    C+K +  +  L  H   H   +PYQC    C   +  +  L  H  +HTG KP
Sbjct: 7   FMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKP 66

Query: 325 YVCEICNKVLTHRSSLISHYR 345
           + C+ C +  +    L +H R
Sbjct: 67  FQCKTCQRKFSRSDHLKTHTR 87

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 57.9 bits (141), Expect = 6e-11
 Identities = 18/52 (34%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 6  KQYQCSQ--CPKAFNQKGNLKEHFRIHTGEKPFTCNI--CSRKFTTYSQVRR 53
          + + C+   C K + +  +L+ H R HTGEKP+ C+   C R+F+   Q++R
Sbjct: 5  RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKR 56

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 76.1 bits (188), Expect = 5e-17
 Identities = 41/135 (30%), Positives = 58/135 (42%), Gaps = 19/135 (14%)

Query: 139 HKLHLKRHTGEKPHTCELC-----SKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVE 193
           H      H   K   C         + F +      H+RRH GEKP  CTFE C +++  
Sbjct: 22  HINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR 81

Query: 194 SWAMRKHVRTCHN--KPTVNRFPC--DKCEKVYSCASSLTKHMKARL--GRQPVSCDI-- 245
              ++ H+R+ H   KP    + C  + C K +S AS   KH   R     +P  C +  
Sbjct: 82  LENLKTHLRS-HTGEKP----YMCEHEGCSKAFSNASDRAKHQN-RTHSNEKPYVCKLPG 135

Query: 246 CHKEFTHPSSVLYHK 260
           C K +T PSS+  H 
Sbjct: 136 CTKRYTDPSSLRKHV 150

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 74.6 bits (184), Expect = 2e-16
 Identities = 37/149 (24%), Positives = 57/149 (38%), Gaps = 17/149 (11%)

Query: 213 FPCDKCEKVYSCASSLTKHMKARL---GRQPVSCDIC-----HKEFTHPSSVLYHKQSIH 264
              D C + +     L  H+ +      R+   C         + F     ++ H +  H
Sbjct: 4   CRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RH 62

Query: 265 NNEI-FKCT--KCDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMAYKTNISLSAHLMK- 318
             E   KCT   C K +  ++ L  H   H   +PY C    C  A+      + H  + 
Sbjct: 63  TGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRT 122

Query: 319 HTGAKPYVCEI--CNKVLTHRSSLISHYR 345
           H+  KPYVC++  C K  T  SSL  H +
Sbjct: 123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 74.2 bits (183), Expect = 3e-16
 Identities = 40/158 (25%), Positives = 61/158 (38%), Gaps = 20/158 (12%)

Query: 149 EKPHTCELCSKGFLSAESYKCHLRR---HKGEKPVTCTFENCTE---TFVESWAMRKHVR 202
           E     + CS+ F S E    H+     H   K   C +  C+     F   + +  H+R
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 203 TCHN--KPTVNRFPCD--KCEKVYSCASSLTKHMKARLGRQPVSC--DICHKEFTHPSSV 256
             H   KP      C    C K YS   +L  H+++  G +P  C  + C K F++ S  
Sbjct: 61  R-HTGEKP----HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDR 115

Query: 257 LYHKQSIHNNEI-FKCTK--CDKVFQHIQLLNRHQLVH 291
             H+   H+NE  + C    C K +     L +H    
Sbjct: 116 AKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTV 153

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 58.8 bits (143), Expect = 9e-11
 Identities = 22/52 (42%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 2   HQGIKQYQC--SQCPKAFNQKGNLKEHFRIHTGEKPFTCN--ICSRKFTTYS 49
           H G K ++C    C K++++  NLK H R HTGEKP+ C    CS+ F+  S
Sbjct: 62  HTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNAS 113

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 58.4 bits (142), Expect = 1e-10
 Identities = 15/55 (27%), Positives = 22/55 (40%), Gaps = 7/55 (12%)

Query: 2  HQGIKQYQCSQC-----PKAFNQKGNLKEHFRIHTGEKPFTCNI--CSRKFTTYS 49
          H   K++ C         + F  +  L  H R HTGEKP  C    C + ++   
Sbjct: 29 HGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLE 83

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 54.1 bits (131), Expect = 3e-09
 Identities = 20/57 (35%), Positives = 32/57 (56%), Gaps = 5/57 (8%)

Query: 2   HQGIKQYQCSQ--CPKAFNQKGNLKEH-FRIHTGEKPFTCNI--CSRKFTTYSQVRR 53
           H G K Y C    C KAF+   +  +H  R H+ EKP+ C +  C++++T  S +R+
Sbjct: 92  HTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRK 148

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 52.2 bits (126), Expect = 2e-08
 Identities = 9/39 (23%), Positives = 14/39 (35%), Gaps = 3/39 (7%)

Query: 6  KQYQCSQCPKAFNQKGNLKEHF---RIHTGEKPFTCNIC 41
             +   C + F+ +  L  H     IH   K F C+  
Sbjct: 2  TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWG 40

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 9/33 (27%), Positives = 14/33 (42%), Gaps = 2/33 (6%)

Query: 2   HQGIKQYQC--SQCPKAFNQKGNLKEHFRIHTG 32
           H   K Y C    C K +    +L++H +   G
Sbjct: 123 HSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 75.8 bits (187), Expect = 7e-17
 Identities = 27/166 (16%), Positives = 44/166 (26%), Gaps = 30/166 (18%)

Query: 139 HKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMR 198
                     +     + C + F +      H+       P         E         
Sbjct: 13  ELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE-------- 64

Query: 199 KHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDI--CHKEFTHPSSV 256
                           C +  K +     L  H++   G +P  C    C K F    ++
Sbjct: 65  ----------------CPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENL 108

Query: 257 LYHKQSIHNNEI-FKCTK--CDKVFQHIQLLNRHQLVHMDTRPYQC 299
             H +  H  E  FKC    CD+ F +     +H  VH   +    
Sbjct: 109 KIH-KRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 71.5 bits (176), Expect = 3e-15
 Identities = 28/142 (19%), Positives = 46/142 (32%), Gaps = 13/142 (9%)

Query: 217 KCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHK---------QSIHNNE 267
                                +       C + F+    ++ H          Q+ H   
Sbjct: 2   SSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCY 61

Query: 268 IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQC--PQCPMAYKTNISLSAHLMKHTGAKPY 325
             +C +  K F+    L  H  VH   +P+ C  P C   +  + +L  H   HTG KP+
Sbjct: 62  WEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPF 121

Query: 326 VCEI--CNKVLTHRSSLISHYR 345
            CE   C++   + S    H  
Sbjct: 122 KCEFEGCDRRFANSSDRKKHMH 143

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 65.8 bits (161), Expect = 3e-13
 Identities = 30/118 (25%), Positives = 43/118 (36%), Gaps = 18/118 (15%)

Query: 140 KLHLKRHTGEKPHT---------CELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTET 190
             H+       P           C    K F +      H+R H GEKP  C F  C + 
Sbjct: 42  VTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI 101

Query: 191 FVESWAMRKHVRTCHN--KPTVNRFPC--DKCEKVYSCASSLTKHMKARLGRQPVSCD 244
           F  S  ++ H RT H   KP    F C  + C++ ++ +S   KHM      +     
Sbjct: 102 FARSENLKIHKRT-HTGEKP----FKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 57.7 bits (140), Expect = 2e-10
 Identities = 24/52 (46%), Positives = 27/52 (51%), Gaps = 4/52 (7%)

Query: 2   HQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCNI--CSRKFTTYS 49
           H G K + C    C K F +  NLK H R HTGEKPF C    C R+F   S
Sbjct: 85  HTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSS 136

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 56.1 bits (136), Expect = 7e-10
 Identities = 17/46 (36%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 6   KQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNI--CSRKFTTYS 49
              +C +  K+F  K  L  H R+HTGEKPF C    C + F    
Sbjct: 61  YWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSE 106

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 53.8 bits (130), Expect = 4e-09
 Identities = 7/57 (12%), Positives = 12/57 (21%), Gaps = 9/57 (15%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFT---------CNICSRKFTTYS 49
           +         C + F+    L  H  +     P           C    + F    
Sbjct: 20 DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 52.3 bits (126), Expect = 1e-08
 Identities = 11/40 (27%), Positives = 19/40 (47%), Gaps = 2/40 (5%)

Query: 2   HQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
           H G K ++C    C + F    + K+H  +HT +K    +
Sbjct: 115 HTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 39.2 bits (92), Expect = 5e-04
 Identities = 5/38 (13%), Positives = 9/38 (23%)

Query: 13 CPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQ 50
             +            I   +       C R F+T  +
Sbjct: 3  SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHE 40

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 74.5 bits (184), Expect = 9e-17
 Identities = 37/112 (33%), Positives = 52/112 (46%), Gaps = 7/112 (6%)

Query: 240 PVSCDI--CHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPY 297
            ++C    C K F   S++  H    H   +  C +C K F     L RHQLVH   +P+
Sbjct: 5   TIACPHKGCTKMFRDNSAMRKH-LHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPF 63

Query: 298 QCP--QCPMAYKTNISLSAHLMKHTGAKPYVCEI--CNKVLTHRSSLISHYR 345
           QC    C   +  + +L  H+  HTG +PYVC    CNK     ++L SH  
Sbjct: 64  QCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL 115

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 69.9 bits (172), Expect = 5e-15
 Identities = 32/99 (32%), Positives = 50/99 (50%), Gaps = 12/99 (12%)

Query: 142 HLKRHT---GEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMR 198
            +++H    G + H C  C K F+ +   K H   H GEKP  CTFE C + F   + +R
Sbjct: 22  AMRKHLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR 81

Query: 199 KHVRTCH--NKPTVNRFPC--DKCEKVYSCASSLTKHMK 233
            HVR  H  ++P    + C  D C K ++ +++L  H+ 
Sbjct: 82  THVRI-HTGDRP----YVCPFDGCNKKFAQSTNLKSHIL 115

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 68.3 bits (168), Expect = 1e-14
 Identities = 38/154 (24%), Positives = 59/154 (38%), Gaps = 38/154 (24%)

Query: 177 EKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARL 236
            + + C  + CT+ F ++ AMRKH+ T   +       C +C K +  +S L +H     
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTHGPRV----HVCAECGKAFVESSKLKRHQL--- 55

Query: 237 GRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI-FKCTK--CDKVFQHIQLLNRHQLVHMD 293
                                     +H  E  F+CT   C K F     L  H  +H  
Sbjct: 56  --------------------------VHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89

Query: 294 TRPYQCP--QCPMAYKTNISLSAHLMKHTGAKPY 325
            RPY CP   C   +  + +L +H++ H  AK  
Sbjct: 90  DRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 62.1 bits (152), Expect = 2e-12
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 5/57 (8%)

Query: 2  HQGI---KQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNI--CSRKFTTYSQVRR 53
          H      + + C++C KAF +   LK H  +HTGEKPF C    C ++F+    +R 
Sbjct: 26 HLHTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 82

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 60.2 bits (147), Expect = 1e-11
 Identities = 32/130 (24%), Positives = 52/130 (40%), Gaps = 23/130 (17%)

Query: 149 EKPHTCEL--CSKGFLSAESYKCHLRRHK---GEKPVTCTFENCTETFVESWAMRKHVRT 203
            +   C    C+K F         +R+H    G +   C    C + FVES  +++H   
Sbjct: 3   PRTIACPHKGCTKMF----RDNSAMRKHLHTHGPRVHVC--AECGKAFVESSKLKRHQLV 56

Query: 204 CHN--KPTVNRFPC--DKCEKVYSCASSLTKHMKARLGRQPVSCDI--CHKEFTHPSSVL 257
            H   KP    F C  + C K +S   +L  H++   G +P  C    C+K+F   +++ 
Sbjct: 57  -HTGEKP----FQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLK 111

Query: 258 YHKQSIHNNE 267
            H    H   
Sbjct: 112 SH-ILTHAKA 120

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 59.1 bits (144), Expect = 3e-11
 Identities = 21/52 (40%), Positives = 31/52 (59%), Gaps = 4/52 (7%)

Query: 2   HQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCNI--CSRKFTTYS 49
           H G K +QC+   C K F+   NL+ H RIHTG++P+ C    C++KF   +
Sbjct: 57  HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQST 108

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 57.9 bits (141), Expect = 8e-11
 Identities = 24/66 (36%), Positives = 35/66 (53%), Gaps = 2/66 (3%)

Query: 140 KLHLKRHTGEKPHTCEL--CSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAM 197
           K H   HTGEKP  C    C K F    + + H+R H G++P  C F+ C + F +S  +
Sbjct: 51  KRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNL 110

Query: 198 RKHVRT 203
           + H+ T
Sbjct: 111 KSHILT 116

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 52.5 bits (127), Expect = 6e-09
 Identities = 12/50 (24%), Positives = 21/50 (42%), Gaps = 3/50 (6%)

Query: 6  KQYQCSQ--CPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          +   C    C K F     +++H   H G +   C  C + F   S+++R
Sbjct: 4  RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKR 52

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 51.0 bits (123), Expect = 2e-08
 Identities = 14/37 (37%), Positives = 15/37 (40%), Gaps = 2/37 (5%)

Query: 2   HQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPF 36
           H G + Y C    C K F Q  NLK H   H   K  
Sbjct: 87  HTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 44.0 bits (105), Expect = 6e-06
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 3/56 (5%)

Query: 292 MDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           M+ R   CP   C   ++ N ++  HL  H G + +VC  C K     S L  H  
Sbjct: 1   MEPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQL 55

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 71.7 bits (177), Expect = 3e-16
 Identities = 30/77 (38%), Positives = 41/77 (53%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
           F C  C K F+    L+ H L+H DTRPY C  C   +     +  H   HTG KP+ C+
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQ 61

Query: 329 ICNKVLTHRSSLISHYR 345
           +C K  +  S+LI+H R
Sbjct: 62  VCGKAFSQSSNLITHSR 78

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 64.0 bits (157), Expect = 2e-13
 Identities = 21/48 (43%), Positives = 29/48 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS 49
          H   + Y C  C K F+QK ++K+H  IHTGEKP  C +C + F+  S
Sbjct: 24 HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSS 71

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 59.0 bits (144), Expect = 1e-11
 Identities = 13/42 (30%), Positives = 21/42 (50%)

Query: 8  YQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS 49
          + C  C K+F +   L  H  IH+  +P+ C  C ++F   S
Sbjct: 2  FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKS 43

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 51.3 bits (124), Expect = 6e-09
 Identities = 25/80 (31%), Positives = 39/80 (48%), Gaps = 2/80 (2%)

Query: 243 CDICHKEFTHPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ 301
           C IC K F   S++  H   IH++   + C  C K F     + +H  +H   +P++C  
Sbjct: 4   CKICGKSFKRSSTLSTH-LLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 302 CPMAYKTNISLSAHLMKHTG 321
           C  A+  + +L  H  KHTG
Sbjct: 63  CGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 45.5 bits (109), Expect = 8e-07
 Identities = 16/31 (51%), Positives = 19/31 (61%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTG 32
          H G K ++C  C KAF+Q  NL  H R HTG
Sbjct: 52 HTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 44.7 bits (107), Expect = 1e-06
 Identities = 21/62 (33%), Positives = 29/62 (46%), Gaps = 2/62 (3%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
           HL  H+  +P+ C+ C K F      K H   H GEKP  C  + C + F +S  +  H 
Sbjct: 20  HLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKC--QVCGKAFSQSSNLITHS 77

Query: 202 RT 203
           R 
Sbjct: 78  RK 79

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 39.3 bits (93), Expect = 1e-04
 Identities = 24/111 (21%), Positives = 38/111 (34%), Gaps = 34/111 (30%)

Query: 154 CELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRF 213
           C++C K F  + +   HL  H   +P                                 +
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRP---------------------------------Y 30

Query: 214 PCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIH 264
           PC  C K +   S + KH     G +P  C +C K F+  S+++ H    H
Sbjct: 31  PCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH-SRKH 80

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 70.9 bits (175), Expect = 1e-15
 Identities = 26/93 (27%), Positives = 36/93 (38%), Gaps = 1/93 (1%)

Query: 254 SSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISL 312
           SS     +     +  F C  C + F     L  H+  H D RPY C  C  A++    L
Sbjct: 2   SSGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHL 61

Query: 313 SAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
             H   H+  KP+ C+ C K      +L  H  
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKT 94

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 67.8 bits (167), Expect = 1e-14
 Identities = 22/103 (21%), Positives = 42/103 (40%), Gaps = 2/103 (1%)

Query: 226 SSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLL 284
           S  +        ++   C  C + FT   ++L H +  H +E  + C  C K F+    L
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIH-ERTHTDERPYTCDICHKAFRRQDHL 61

Query: 285 NRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
             H+ +H   +P++C +C   +  + +L+ H   H        
Sbjct: 62  RDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 64.8 bits (159), Expect = 2e-13
 Identities = 17/48 (35%), Positives = 26/48 (54%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS 49
           +  K++ C  C + F +  NL  H R HT E+P+TC+IC + F    
Sbjct: 12 SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQD 59

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 62.8 bits (154), Expect = 9e-13
 Identities = 18/48 (37%), Positives = 26/48 (54%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS 49
          H   + Y C  C KAF ++ +L++H  IH+ EKPF C  C + F    
Sbjct: 40 HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSR 87

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 60.1 bits (147), Expect = 9e-12
 Identities = 11/38 (28%), Positives = 15/38 (39%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
           H   K ++C +C K F Q   L  H  +H      T  
Sbjct: 68  HSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTAA 105

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 2/88 (2%)

Query: 213 FPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI-FKC 271
           F C  C + ++ + +L  H +     +P +CDICHK F     +  H + IH+ E  FKC
Sbjct: 18  FICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH-RYIHSKEKPFKC 76

Query: 272 TKCDKVFQHIQLLNRHQLVHMDTRPYQC 299
            +C K F   + L  H+ +HM T     
Sbjct: 77  QECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 59.0 bits (144), Expect = 2e-11
 Identities = 24/94 (25%), Positives = 38/94 (40%), Gaps = 9/94 (9%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
                  +K   C+ C + F  + +   H R H  E+P TC  + C + F     +R H 
Sbjct: 8   GRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTC--DICHKAFRRQDHLRDHR 65

Query: 202 RTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMK 233
              H+  KP    F C +C K +  + +L  H  
Sbjct: 66  YI-HSKEKP----FKCQECGKGFCQSRTLAVHKT 94

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 47.4 bits (114), Expect = 2e-07
 Identities = 22/75 (29%), Positives = 37/75 (49%), Gaps = 7/75 (9%)

Query: 129 SKSSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCT 188
           +KS + +     +H + HT E+P+TC++C K F   +  + H   H  EKP  C  + C 
Sbjct: 28  TKSYNLL-----IHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC--QECG 80

Query: 189 ETFVESWAMRKHVRT 203
           + F +S  +  H   
Sbjct: 81  KGFCQSRTLAVHKTL 95

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 39.7 bits (94), Expect = 1e-04
 Identities = 7/31 (22%), Positives = 8/31 (25%)

Query: 20 KGNLKEHFRIHTGEKPFTCNICSRKFTTYSQ 50
                       +K F C  C R FT    
Sbjct: 2  SSGSSGGRLPSKTKKEFICKFCGRHFTKSYN 32

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 70.5 bits (174), Expect = 1e-15
 Identities = 26/77 (33%), Positives = 35/77 (45%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
            KC  C K F     L  H   H   +PY+C  C  A   + SL+ HL  H+  +P+ C+
Sbjct: 9   HKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ 68

Query: 329 ICNKVLTHRSSLISHYR 345
           IC     + S L  H R
Sbjct: 69  ICPYASRNSSQLTVHLR 85

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 67.4 bits (166), Expect = 2e-14
 Identities = 28/92 (30%), Positives = 40/92 (43%), Gaps = 2/92 (2%)

Query: 237 GRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTR 295
              P  C++C K F+    +  H    H     +KC  CD        LN+H  +H D R
Sbjct: 5   SSGPHKCEVCGKCFSRKDKLKTH-MRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDER 63

Query: 296 PYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
           P++C  CP A + +  L+ HL  HTG      
Sbjct: 64  PFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 65.9 bits (162), Expect = 5e-14
 Identities = 20/52 (38%), Positives = 27/52 (51%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          H G+K Y+C  C  A     +L +H RIH+ E+PF C IC       SQ+  
Sbjct: 31 HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV 82

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 31/100 (31%), Positives = 45/100 (45%), Gaps = 9/100 (9%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCH 205
                PH CE+C K F   +  K H+R H G KP  C  + C     +S ++ KH+R  H
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRI-H 59

Query: 206 N--KPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSC 243
           +  +P    F C  C      +S LT H+++  G    S 
Sbjct: 60  SDERP----FKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 64.4 bits (158), Expect = 2e-13
 Identities = 17/48 (35%), Positives = 22/48 (45%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS 49
                ++C  C K F++K  LK H R HTG KP+ C  C       S
Sbjct: 3  SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSS 50

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 59.0 bits (144), Expect = 2e-11
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
          H   + ++C  CP A      L  H R HTG+   + 
Sbjct: 59 HSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 51.7 bits (125), Expect = 7e-09
 Identities = 18/51 (35%), Positives = 24/51 (47%)

Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
            P++C  C   +     L  H+  HTG KPY C+ C+      SSL  H R
Sbjct: 7   GPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR 57

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 51.3 bits (124), Expect = 9e-09
 Identities = 20/62 (32%), Positives = 30/62 (48%), Gaps = 2/62 (3%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
           H++ HTG KP+ C+ C      + S   HLR H  E+P  C  + C      S  +  H+
Sbjct: 27  HMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC--QICPYASRNSSQLTVHL 84

Query: 202 RT 203
           R+
Sbjct: 85  RS 86

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 38.2 bits (90), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
              + P+ CE+C K  + +  L +H R
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMR 29

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 69.9 bits (172), Expect = 2e-15
 Identities = 28/89 (31%), Positives = 39/89 (43%), Gaps = 3/89 (3%)

Query: 145 RHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTC 204
           + T         C K +  +   K HLR H GEKP  C ++ C   F  S  + +H R  
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK- 59

Query: 205 HNKPTVNRFPCDKCEKVYSCASSLTKHMK 233
           H       F C KC++ +S +  L  HMK
Sbjct: 60  HTG--HRPFQCQKCDRAFSRSDHLALHMK 86

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 59.1 bits (144), Expect = 2e-11
 Identities = 17/54 (31%), Positives = 25/54 (46%), Gaps = 2/54 (3%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNI--CSRKFTTYSQVRR 53
                   + C K + +  +LK H R HTGEKP+ C+   C  KF    ++ R
Sbjct: 2  RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTR 55

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 58.3 bits (142), Expect = 2e-11
 Identities = 19/48 (39%), Positives = 23/48 (47%), Gaps = 2/48 (4%)

Query: 1  WHQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFT 46
           H G K Y C    C   F +   L  H+R HTG +PF C  C R F+
Sbjct: 29 THTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFS 76

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 56.0 bits (136), Expect = 2e-10
 Identities = 20/80 (25%), Positives = 32/80 (40%), Gaps = 2/80 (2%)

Query: 268 IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQC--PQCPMAYKTNISLSAHLMKHTGAKPY 325
                 C K +     L  H   H   +PY C    C   +  +  L+ H  KHTG +P+
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66

Query: 326 VCEICNKVLTHRSSLISHYR 345
            C+ C++  +    L  H +
Sbjct: 67  QCQKCDRAFSRSDHLALHMK 86

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 52.9 bits (128), Expect = 2e-09
 Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 9/77 (11%)

Query: 129 SKSSHKIYLGHKLHLKRHTGEKPHTC--ELCSKGFLSAESYKCHLRRHKGEKPVTCTFEN 186
           +KSSH      K HL+ HTGEKP+ C  + C   F  ++    H R+H G +P  C    
Sbjct: 18  TKSSHL-----KAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK-- 70

Query: 187 CTETFVESWAMRKHVRT 203
           C   F  S  +  H++ 
Sbjct: 71  CDRAFSRSDHLALHMKR 87

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 47.1 bits (113), Expect = 2e-07
 Identities = 19/57 (33%), Positives = 21/57 (36%), Gaps = 2/57 (3%)

Query: 291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC--EICNKVLTHRSSLISHYR 345
              T       C   Y  +  L AHL  HTG KPY C  + C         L  HYR
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR 58

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 39.8 bits (94), Expect = 1e-04
 Identities = 11/33 (33%), Positives = 20/33 (60%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRH 174
           H ++HTG +P  C+ C + F  ++    H++RH
Sbjct: 56  HYRKHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 37.9 bits (89), Expect = 4e-04
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIH 30
          H G + +QC +C +AF++  +L  H + H
Sbjct: 60 HTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 69.8 bits (172), Expect = 2e-15
 Identities = 24/52 (46%), Positives = 32/52 (61%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          H G K +QC  C + F++  +L  H R HTGEKPF C+IC RKF    + +R
Sbjct: 29 HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR 80

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 65.2 bits (160), Expect = 1e-13
 Identities = 23/79 (29%), Positives = 36/79 (45%), Gaps = 2/79 (2%)

Query: 269 FKC--TKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYV 326
           + C    CD+ F     L RH  +H   +P+QC  C   +  +  L+ H+  HTG KP+ 
Sbjct: 5   YACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA 64

Query: 327 CEICNKVLTHRSSLISHYR 345
           C+IC +          H +
Sbjct: 65  CDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 62.5 bits (153), Expect = 9e-13
 Identities = 21/43 (48%), Positives = 27/43 (62%), Gaps = 2/43 (4%)

Query: 6  KQYQC--SQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFT 46
          + Y C    C + F+Q G+L  H RIHTG+KPF C IC R F+
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFS 45

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 58.2 bits (142), Expect = 3e-11
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 140 KLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRK 199
             H++ HTG+KP  C +C + F  ++    H+R H GEKP  C  + C   F  S   ++
Sbjct: 23  TRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKR 80

Query: 200 HVRT 203
           H + 
Sbjct: 81  HTKI 84

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 57.9 bits (141), Expect = 3e-11
 Identities = 28/89 (31%), Positives = 42/89 (47%), Gaps = 11/89 (12%)

Query: 149 EKPHTCEL--CSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHN 206
           E+P+ C +  C + F  + S   H+R H G+KP  C    C   F  S  +  H+RT H 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRT-HT 58

Query: 207 --KPTVNRFPCDKCEKVYSCASSLTKHMK 233
             KP    F CD C + ++ +    +H K
Sbjct: 59  GEKP----FACDICGRKFARSDERKRHTK 83

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 56.3 bits (137), Expect = 1e-10
 Identities = 29/93 (31%), Positives = 46/93 (49%), Gaps = 8/93 (8%)

Query: 177 EKPVTCTFENCTETFVESWAMRKHVRTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKA 234
           E+P  C  E+C   F +S ++ +H+R  H   KP    F C  C + +S +  LT H++ 
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRI-HTGQKP----FQCRICMRNFSRSDHLTTHIRT 56

Query: 235 RLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE 267
             G +P +CDIC ++F        H   IH  +
Sbjct: 57  HTGEKPFACDICGRKFARSDERKRH-TKIHLRQ 88

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 50.9 bits (123), Expect = 1e-08
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEK 34
          H G K + C  C + F +    K H +IH  +K
Sbjct: 57 HTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 49.8 bits (120), Expect = 2e-08
 Identities = 19/79 (24%), Positives = 29/79 (36%), Gaps = 2/79 (2%)

Query: 246 CHKEFTHPSSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPM 304
           C + F+   S+  H   IH  +  F+C  C + F     L  H   H   +P+ C  C  
Sbjct: 12  CDRRFSQSGSLTRH-IRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGR 70

Query: 305 AYKTNISLSAHLMKHTGAK 323
            +  +     H   H   K
Sbjct: 71  KFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 45.1 bits (108), Expect = 1e-06
 Identities = 14/39 (35%), Positives = 23/39 (58%)

Query: 140 KLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEK 178
             H++ HTGEKP  C++C + F  ++  K H + H  +K
Sbjct: 51  TTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 69.1 bits (170), Expect = 4e-15
 Identities = 28/79 (35%), Positives = 41/79 (51%), Gaps = 2/79 (2%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTG--AKPYV 326
             C  C K+F+ +  LNRH+L H   +PY CP C + +K    +S H+  H G   KPY+
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYI 67

Query: 327 CEICNKVLTHRSSLISHYR 345
           C+ C K  +    L  H +
Sbjct: 68  CQSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 65.6 bits (161), Expect = 8e-14
 Identities = 29/92 (31%), Positives = 36/92 (39%), Gaps = 11/92 (11%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCH 205
            +G     CE+C K F        H   H GEKP +C    C   F     M  HVR+ H
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSC--PVCGLRFKRKDRMSYHVRS-H 58

Query: 206 ----NKPTVNRFPCDKCEKVYSCASSLTKHMK 233
                KP    + C  C K +S    L  H+K
Sbjct: 59  DGSVGKP----YICQSCGKGFSRPDHLNGHIK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 65.2 bits (160), Expect = 9e-14
 Identities = 15/48 (31%), Positives = 21/48 (43%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS 49
            G     C  C K F    +L  H   H+GEKP++C +C  +F    
Sbjct: 2  SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKD 49

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 17/50 (34%), Positives = 22/50 (44%), Gaps = 2/50 (4%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE--KPFTCNICSRKFTTYS 49
          H G K Y C  C   F +K  +  H R H G   KP+ C  C + F+   
Sbjct: 30 HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPD 79

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 53.6 bits (130), Expect = 1e-09
 Identities = 23/83 (27%), Positives = 35/83 (42%), Gaps = 5/83 (6%)

Query: 213 FPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI---F 269
             C+ C K++     L +H  +  G +P SC +C   F     + YH    H+  +   +
Sbjct: 8   VACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYH-VRSHDGSVGKPY 66

Query: 270 KCTKCDKVFQHIQLLNRH-QLVH 291
            C  C K F     LN H + VH
Sbjct: 67  ICQSCGKGFSRPDHLNGHIKQVH 89

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 51.3 bits (124), Expect = 7e-09
 Identities = 13/50 (26%), Positives = 21/50 (42%)

Query: 296 PYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
              C  C   ++    L+ H + H+G KPY C +C      +  +  H R
Sbjct: 7   GVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR 56

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 44.8 bits (107), Expect = 2e-06
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 6  KQYQCSQCPKAFNQKGNLKEHF-RIHTGEK 34
          K Y C  C K F++  +L  H  ++H+G  
Sbjct: 64 KPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 38.2 bits (90), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 11/27 (40%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
            +G+    CEIC K+      L  H  
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKL 28

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 67.9 bits (167), Expect = 8e-15
 Identities = 22/49 (44%), Positives = 31/49 (63%)

Query: 5  IKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          +K +QC  C + F++  +L  H R HTGEKPF C+IC RKF    + +R
Sbjct: 1  MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR 49

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 61.0 bits (149), Expect = 3e-12
 Identities = 24/84 (28%), Positives = 35/84 (41%), Gaps = 6/84 (7%)

Query: 150 KPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPT 209
           KP  C +C + F  ++    H+R H GEKP  C  + C   F  S   ++H    H  P 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQHILP- 58

Query: 210 VNRFPCDKCEKVYSCASSLTKHMK 233
                 DK E++ S    L   + 
Sbjct: 59  ---ILEDKVEELLSKNYHLENEVA 79

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 60.6 bits (148), Expect = 4e-12
 Identities = 10/48 (20%), Positives = 15/48 (31%), Gaps = 1/48 (2%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS 49
          H G K + C  C + F +    K H  I     P   +      +   
Sbjct: 26 HTGEKPFACDICGRKFARSDERKRHRDIQH-ILPILEDKVEELLSKNY 72

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 59.8 bits (146), Expect = 8e-12
 Identities = 14/75 (18%), Positives = 26/75 (34%), Gaps = 1/75 (1%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
           F+C  C + F     L  H   H   +P+ C  C   +  +     H        P + +
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILED 62

Query: 329 ICNKVLTHRSSLISH 343
              ++L+    L + 
Sbjct: 63  KVEELLSKNYHLENE 77

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 53.3 bits (129), Expect = 2e-09
 Identities = 18/76 (23%), Positives = 32/76 (42%), Gaps = 1/76 (1%)

Query: 213 FPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCT 272
           F C  C + +S +  LT H++   G +P +CDIC ++F        H + I +       
Sbjct: 4   FQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH-RDIQHILPILED 62

Query: 273 KCDKVFQHIQLLNRHQ 288
           K +++      L    
Sbjct: 63  KVEELLSKNYHLENEV 78

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 51.0 bits (123), Expect = 9e-09
 Identities = 15/51 (29%), Positives = 24/51 (47%)

Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +P+QC  C   +  +  L+ H+  HTG KP+ C+IC +          H  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD 52

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 3/32 (9%), Positives = 11/32 (34%), Gaps = 3/32 (9%)

Query: 6  KQYQCSQCPKAFNQKGNLKEH---FRIHTGEK 34
                +  +  ++  +L+      +   GE+
Sbjct: 57 LPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 66.3 bits (163), Expect = 2e-14
 Identities = 21/48 (43%), Positives = 28/48 (58%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS 49
              K Y+C +C  +F  KGNL  H  +HTGEKP+ CNIC  +F   +
Sbjct: 12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPA 59

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.4 bits (145), Expect = 8e-12
 Identities = 19/62 (30%), Positives = 33/62 (53%)

Query: 284 LNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH 343
            + H  +    +PY+C +C  +++   +L++H   HTG KPY C IC       ++L +H
Sbjct: 5   HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 344 YR 345
            R
Sbjct: 65  TR 66

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 55.2 bits (134), Expect = 2e-10
 Identities = 19/35 (54%), Positives = 24/35 (68%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPF 36
          H G K Y+C+ C   FN+  NLK H RIH+GEKP+
Sbjct: 40 HTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 20/73 (27%), Positives = 35/73 (47%), Gaps = 1/73 (1%)

Query: 254 SSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISL 312
               +H   + +++  +KC +C   F++   L  H+ VH   +PY+C  C   +    +L
Sbjct: 2   GHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANL 61

Query: 313 SAHLMKHTGAKPY 325
             H   H+G KPY
Sbjct: 62  KTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 48.6 bits (117), Expect = 5e-08
 Identities = 22/77 (28%), Positives = 28/77 (36%), Gaps = 15/77 (19%)

Query: 131 SSHKIYLGHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHK----GEKPVTCTFEN 186
             H     H  H      +KP+ C+ C   F     YK +L  HK    GEKP  C    
Sbjct: 2   GHH-----HHHHSHMTHSDKPYKCDRCQASF----RYKGNLASHKTVHTGEKPYRC--NI 50

Query: 187 CTETFVESWAMRKHVRT 203
           C   F     ++ H R 
Sbjct: 51  CGAQFNRPANLKTHTRI 67

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 45.1 bits (108), Expect = 9e-07
 Identities = 17/73 (23%), Positives = 28/73 (38%), Gaps = 2/73 (2%)

Query: 226 SSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLL 284
                H       +P  CD C   F +  ++  H +++H  E  ++C  C   F     L
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASH-KTVHTGEKPYRCNICGAQFNRPANL 61

Query: 285 NRHQLVHMDTRPY 297
             H  +H   +PY
Sbjct: 62  KTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 40.1 bits (95), Expect = 4e-05
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 215 CDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE 267
           CD+C+  +    +L  H     G +P  C+IC  +F  P+++  H   IH+ E
Sbjct: 20  CDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH-TRIHSGE 71

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 39.7 bits (94), Expect = 6e-05
 Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 4/38 (10%)

Query: 312 LSAHLMKH----TGAKPYVCEICNKVLTHRSSLISHYR 345
           +  H   H       KPY C+ C     ++ +L SH  
Sbjct: 1   MGHHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKT 38

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 39.4 bits (93), Expect = 8e-05
 Identities = 6/28 (21%), Positives = 11/28 (39%)

Query: 22 NLKEHFRIHTGEKPFTCNICSRKFTTYS 49
          +   H  +   +KP+ C+ C   F    
Sbjct: 4  HHHHHSHMTHSDKPYKCDRCQASFRYKG 31

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 67.1 bits (165), Expect = 3e-14
 Identities = 27/98 (27%), Positives = 37/98 (37%), Gaps = 4/98 (4%)

Query: 246 CHKEFTHPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPM 304
           C K FTH S    H  S+H     + C  C K F+    L  H  +H   +PY+C  C  
Sbjct: 15  CGKSFTHKSQRDRH-MSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAK 73

Query: 305 AYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLIS 342
            +    S   H+   +  K Y      +  T  S   S
Sbjct: 74  RFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 66.7 bits (164), Expect = 4e-14
 Identities = 21/49 (42%), Positives = 29/49 (59%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQ 50
          H G++ Y C  C K F  K +L  H +IHTG KP+ CNIC+++F     
Sbjct: 32 HLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDS 80

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 63.2 bits (155), Expect = 7e-13
 Identities = 29/75 (38%), Positives = 36/75 (48%), Gaps = 1/75 (1%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
           + C +C K F H    +RH  +H+  RPY C  C   +K    L  H+  HTG KPY C 
Sbjct: 11  YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN 69

Query: 329 ICNKVLTHRSSLISH 343
           IC K    R S   H
Sbjct: 70  ICAKRFMWRDSFHRH 84

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 60.1 bits (147), Expect = 8e-12
 Identities = 13/49 (26%), Positives = 21/49 (42%), Gaps = 2/49 (4%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQ 50
           H GIK Y+C+ C K F  + +   H  + +  K +      +  T  S 
Sbjct: 60  HTGIKPYECNICAKRFMWRDSF--HRHVTSCTKSYEAAKAEQNTTEASG 106

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 60.1 bits (147), Expect = 1e-11
 Identities = 27/136 (19%), Positives = 44/136 (32%), Gaps = 38/136 (27%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCH 205
            +G+K + C+ C K F        H+  H G +P                          
Sbjct: 5   SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRP-------------------------- 37

Query: 206 NKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHN 265
                  + C  C K +     L  HMK   G +P  C+IC K F    S   H + + +
Sbjct: 38  -------YGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSF--H-RHVTS 87

Query: 266 NEI-FKCTKCDKVFQH 280
               ++  K ++    
Sbjct: 88  CTKSYEAAKAEQNTTE 103

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 59.8 bits (146), Expect = 1e-11
 Identities = 17/48 (35%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYS 49
            G K Y C QC K+F  K     H  +H G +P+ C +C +KF    
Sbjct: 5  SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKH 51

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 55.9 bits (136), Expect = 3e-10
 Identities = 24/88 (27%), Positives = 39/88 (44%), Gaps = 7/88 (7%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
           H+  H G +P+ C +C K F        H++ H G KP  C    C + F+   +  +HV
Sbjct: 28  HMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECN--ICAKRFMWRDSFHRHV 85

Query: 202 RTCHNKPTVNRFPCDKCEKVYSCASSLT 229
            +C  K     +   K E+  + AS  +
Sbjct: 86  TSCT-KS----YEAAKAEQNTTEASGPS 108

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 47.1 bits (113), Expect = 4e-07
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           + Y C QC  ++        H+  H G +PY C +C K    +  L+ H +
Sbjct: 9   KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 65.2 bits (160), Expect = 4e-14
 Identities = 19/48 (39%), Positives = 30/48 (62%)

Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          + + C  C +AF ++ +LK H+R HT EKP+ C +C+R FT    + R
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIR 48

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 49.4 bits (119), Expect = 2e-08
 Identities = 19/51 (37%), Positives = 24/51 (47%)

Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           R + C  C  A+     L  H   HT  KPY C +CN+  T R  LI H +
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQ 51

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 43.2 bits (103), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%), Gaps = 1/34 (2%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHF-RIHTGEK 34
          H   K Y C  C +AF ++  L  H  +IH+G  
Sbjct: 25 HTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 18/54 (33%), Positives = 24/54 (44%), Gaps = 1/54 (1%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK-HTG 321
           F C  C + F   + L RH   H + +PY C  C  A+     L  H  K H+G
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 14/56 (25%), Positives = 29/56 (51%)

Query: 213 FPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI 268
           F C+ C + ++    L +H ++    +P  C +C++ FT    ++ H Q IH+  +
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 8/38 (21%)

Query: 142 HLKRH----TGEKPHTCELCSKGFLSAESYKCHLRRHK 175
           HLKRH    T EKP+ C LC++ F    + +  L RH 
Sbjct: 17  HLKRHYRSHTNEKPYPCGLCNRAF----TRRDLLIRHA 50

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 36.3 bits (85), Expect = 8e-04
 Identities = 17/56 (30%), Positives = 24/56 (42%), Gaps = 2/56 (3%)

Query: 150 KPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCH 205
           +   CE+C++ F   E  K H R H  EKP  C    C   F     + +H +  H
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIH 54

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 65.6 bits (161), Expect = 5e-14
 Identities = 16/54 (29%), Positives = 19/54 (35%), Gaps = 2/54 (3%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE--KPFTCNICSRKFTTYSQVRR 53
          H G K Y+C  C   F Q G +K H      E    F C  C       S +  
Sbjct: 10 HSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGV 63

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.9 bits (141), Expect = 3e-11
 Identities = 13/64 (20%), Positives = 26/64 (40%), Gaps = 2/64 (3%)

Query: 284 LNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTG--AKPYVCEICNKVLTHRSSLI 341
                  H   +PY+C  C   +  + ++  H+++        + C  C+ V+  +S L 
Sbjct: 3   SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 342 SHYR 345
            H R
Sbjct: 63  VHLR 66

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.9 bits (141), Expect = 3e-11
 Identities = 16/68 (23%), Positives = 27/68 (39%), Gaps = 4/68 (5%)

Query: 140 KLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGE--KPVTCTFENCTETFVESWAM 197
               + H+GEKP+ C +C   F  + + K H+ +   E      C   +C         +
Sbjct: 4   GSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHC--PHCDTVIARKSDL 61

Query: 198 RKHVRTCH 205
             H+R  H
Sbjct: 62  GVHLRKQH 69

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 51.4 bits (124), Expect = 5e-09
 Identities = 8/33 (24%), Positives = 14/33 (42%), Gaps = 1/33 (3%)

Query: 6  KQYQCSQCPKAFNQKGNLKEHFR-IHTGEKPFT 37
           ++ C  C     +K +L  H R  H+   P +
Sbjct: 44 AKFHCPHCDTVIARKSDLGVHLRKQHSYSGPSS 76

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 14/60 (23%), Positives = 21/60 (35%), Gaps = 3/60 (5%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHM--DTRPYQCPQCPMAYKTNISLSAHLMK-HTGAKPY 325
           ++C  C   F     +  H L     +   + CP C         L  HL K H+ + P 
Sbjct: 16  YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.4 bits (119), Expect = 3e-08
 Identities = 12/33 (36%), Positives = 18/33 (54%)

Query: 21 GNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          G+     R H+GEKP+ C IC  +FT    ++ 
Sbjct: 1  GSSGSSGRTHSGEKPYECYICHARFTQSGTMKM 33

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 42.1 bits (100), Expect = 1e-05
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 311 SLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           S  +    H+G KPY C IC+   T   ++  H  
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHIL 36

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 13/74 (17%), Positives = 25/74 (33%), Gaps = 9/74 (12%)

Query: 198 RKHVRTCHN--KPTVNRFPCDKCEKVYSCASSLTKHMKARLG--RQPVSCDICHKEFTHP 253
               RT H+  KP    + C  C   ++ + ++  H+  +         C  C       
Sbjct: 4   GSSGRT-HSGEKP----YECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARK 58

Query: 254 SSVLYHKQSIHNNE 267
           S +  H +  H+  
Sbjct: 59  SDLGVHLRKQHSYS 72

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 64.4 bits (158), Expect = 1e-13
 Identities = 16/52 (30%), Positives = 25/52 (48%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
                 +CS+C  + + K  L+ H RIH  ++PF CN CS      S + +
Sbjct: 4  GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSK 55

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 53.7 bits (130), Expect = 7e-10
 Identities = 8/37 (21%), Positives = 15/37 (40%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
          H   + ++C+ C     Q  NL +H +   G+     
Sbjct: 32 HCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 51.7 bits (125), Expect = 4e-09
 Identities = 12/56 (21%), Positives = 22/56 (39%)

Query: 290 VHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                 P +C +C  +  +  +L  H   H   +P+ C  C+      S+L  H +
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK 58

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 13/58 (22%), Positives = 23/58 (39%), Gaps = 2/58 (3%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRT 203
            +   P  C  CS    S  + + H R H  ++P  C    C+    +   + KH++ 
Sbjct: 4   GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKC--NYCSFDTKQPSNLSKHMKK 59

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 49.8 bits (120), Expect = 1e-08
 Identities = 16/57 (28%), Positives = 24/57 (42%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPY 325
            KC++C         L  H+ +H   RP++C  C    K   +LS H+ K  G    
Sbjct: 10  EKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSG 66

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 43.3 bits (103), Expect = 3e-06
 Identities = 8/44 (18%), Positives = 19/44 (43%)

Query: 140 KLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
           ++H + H  ++P  C  CS       +   H+++  G+     +
Sbjct: 26  RIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 39.8 bits (94), Expect = 6e-05
 Identities = 18/64 (28%), Positives = 26/64 (40%), Gaps = 9/64 (14%)

Query: 172 RRHKGEKPVTCTFENCTETFVESWAMRKHVRTCH--NKPTVNRFPCDKCEKVYSCASSLT 229
                  P  C    C+ +     A+R H R  H  ++P    F C+ C       S+L+
Sbjct: 2   SSGSSGHPEKC--SECSYSCSSKAALRIHERI-HCTDRP----FKCNYCSFDTKQPSNLS 54

Query: 230 KHMK 233
           KHMK
Sbjct: 55  KHMK 58

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 37.5 bits (88), Expect = 3e-04
 Identities = 11/50 (22%), Positives = 20/50 (40%), Gaps = 1/50 (2%)

Query: 215 CDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIH 264
           C +C    S  ++L  H +     +P  C+ C  +   PS++  H     
Sbjct: 12  CSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKH-MKKF 60

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 63.6 bits (156), Expect = 2e-13
 Identities = 22/49 (44%), Positives = 30/49 (61%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQ 50
          H G K Y C +C KAF++   L +H R+HTGEKP+ C  C + F+  S 
Sbjct: 9  HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSG 57

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 58.6 bits (143), Expect = 1e-11
 Identities = 22/62 (35%), Positives = 30/62 (48%)

Query: 284 LNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH 343
            +    +H   +PY C +C  A+  +  L  H   HTG KPY C  C K  +  S LI+H
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 344 YR 345
            R
Sbjct: 62  QR 63

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 54.4 bits (132), Expect = 4e-10
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPF 36
          H G K Y+C +C KAF+Q   L  H RIHT     
Sbjct: 37 HTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)

Query: 261 QSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKH 319
             IH+ E  + C +C K F    +L +HQ VH   +PY+C +C  A+  N  L  H   H
Sbjct: 6   SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIH 65

Query: 320 TGAKPY 325
           T     
Sbjct: 66  TSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 45.2 bits (108), Expect = 8e-07
 Identities = 21/62 (33%), Positives = 28/62 (45%), Gaps = 2/62 (3%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
               H+GEKP+ C  C K F  +     H R H GEKP  C    C + F ++  +  H 
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKC--LECGKAFSQNSGLINHQ 62

Query: 202 RT 203
           R 
Sbjct: 63  RI 64

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 43.6 bits (104), Expect = 2e-06
 Identities = 20/71 (28%), Positives = 29/71 (40%), Gaps = 2/71 (2%)

Query: 228 LTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLLNR 286
            +       G +P  C  C K F+  S ++ H Q +H  E  +KC +C K F     L  
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQH-QRVHTGEKPYKCLECGKAFSQNSGLIN 60

Query: 287 HQLVHMDTRPY 297
           HQ +H      
Sbjct: 61  HQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 38.6 bits (91), Expect = 1e-04
 Identities = 18/53 (33%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 215 CDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE 267
           C +C K +S +S L +H +   G +P  C  C K F+  S ++ H Q IH + 
Sbjct: 17  CVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH-QRIHTSG 68

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 38.2 bits (90), Expect = 2e-04
 Identities = 10/28 (35%), Positives = 14/28 (50%)

Query: 23 LKEHFRIHTGEKPFTCNICSRKFTTYSQ 50
                IH+GEKP+ C  C + F+  S 
Sbjct: 2  SSGSSGIHSGEKPYGCVECGKAFSRSSI 29

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 63.2 bits (154), Expect = 3e-13
 Identities = 15/55 (27%), Positives = 18/55 (32%), Gaps = 3/55 (5%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHT---GEKPFTCNICSRKFTTYSQVRR 53
            G    QC  C     QK +L  H R H        F C  C ++F     V  
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAA 56

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 57.0 bits (138), Expect = 6e-11
 Identities = 15/79 (18%), Positives = 24/79 (30%), Gaps = 7/79 (8%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRH---KGEKPVTCTFENCTETFVESWAMRKHVR 202
            +G     CE+C        S   H R+H          C F  C + F +  ++  H  
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRS 59

Query: 203 TCHNKPTVNRFPCDKCEKV 221
             H    +   P +     
Sbjct: 60  KSHPALLL--APQESSGPS 76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 51.3 bits (123), Expect = 6e-09
 Identities = 15/54 (27%), Positives = 20/54 (37%), Gaps = 3/54 (5%)

Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHT---GAKPYVCEICNKVLTHRSSLISHYR 345
              QC  C    +   SL+ H  KH     A  + CE C K      S+ +H  
Sbjct: 6   SGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRS 59

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 48.9 bits (117), Expect = 4e-08
 Identities = 14/71 (19%), Positives = 24/71 (33%), Gaps = 5/71 (7%)

Query: 237 GRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI----FKCTKCDKVFQHIQLLNRHQLVHM 292
           G   + C+IC       +S+ +H Q  H   +    F C  C K F+    +  H+    
Sbjct: 4   GSSGLQCEICGFTCRQKASLNWH-QRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH 62

Query: 293 DTRPYQCPQCP 303
                   +  
Sbjct: 63  PALLLAPQESS 73

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 47.0 bits (112), Expect = 2e-07
 Identities = 15/63 (23%), Positives = 24/63 (38%), Gaps = 3/63 (4%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDT---RPYQCPQCPMAYKTNISLSAHLMKHTGAKPY 325
            +C  C    +    LN HQ  H +T     + C  C   ++   S++AH  K   A   
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 326 VCE 328
             +
Sbjct: 68  APQ 70

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.5 bits (108), Expect = 6e-07
 Identities = 6/42 (14%), Positives = 11/42 (26%)

Query: 3  QGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRK 44
              ++ C  C K F +  ++  H               S  
Sbjct: 34 VAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQESSGP 75

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 45.5 bits (108), Expect = 8e-07
 Identities = 14/67 (20%), Positives = 22/67 (32%), Gaps = 3/67 (4%)

Query: 213 FPCDKCEKVYSCASSLTKHMK---ARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIF 269
             C+ C       +SL  H +     +      C+ C K F  P SV  H+   H   + 
Sbjct: 8   LQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLL 67

Query: 270 KCTKCDK 276
              +   
Sbjct: 68  APQESSG 74

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 38.2 bits (89), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
            +G+    CEIC      ++SL  H R
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQR 28

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 63.0 bits (154), Expect = 4e-13
 Identities = 13/57 (22%), Positives = 21/57 (36%), Gaps = 8/57 (14%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRI--HTGEKPFTCNICSRKFTTYSQVRRSSN 56
           +G   Y+C  C + +    N   H+        K + C  C ++FT      R  N
Sbjct: 5  KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFT------RKDN 55

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 52.2 bits (126), Expect = 2e-09
 Identities = 15/62 (24%), Positives = 25/62 (40%), Gaps = 4/62 (6%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLR--RHKGEKPVTCTFENCTETFVESWAMRKHVRT 203
             GE  + C++CS+ +    ++  H      +  K   C F  C + F     M  HV+ 
Sbjct: 5   KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKI 62

Query: 204 CH 205
            H
Sbjct: 63  IH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 50.2 bits (121), Expect = 1e-08
 Identities = 12/60 (20%), Positives = 21/60 (35%), Gaps = 2/60 (3%)

Query: 288 QLVHMDTRPYQCPQCPMAYKTNISLSAHLM--KHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +        Y+C  C   Y    +   H +       K Y C  C K  T + ++ +H +
Sbjct: 2   EFTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVK 61

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTG 32
           + +K Y C  C K F +K N+  H +I   
Sbjct: 35 KRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.7 bits (91), Expect = 1e-04
 Identities = 13/57 (22%), Positives = 22/57 (38%), Gaps = 2/57 (3%)

Query: 237 GRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI--FKCTKCDKVFQHIQLLNRHQLVH 291
           G     C +C + +TH S+   H  + H   +  + C  C K F     +  H  + 
Sbjct: 7   GEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKII 63

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 9/26 (34%), Positives = 12/26 (46%)

Query: 28 RIHTGEKPFTCNICSRKFTTYSQVRR 53
              GE  + C +CSR +T  S   R
Sbjct: 3  FTKEGEHTYRCKVCSRVYTHISNFCR 28

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.3 bits (90), Expect = 2e-04
 Identities = 15/54 (27%), Positives = 24/54 (44%), Gaps = 2/54 (3%)

Query: 213 FPCDKCEKVYSCASSLTKHMKARL--GRQPVSCDICHKEFTHPSSVLYHKQSIH 264
           + C  C +VY+  S+  +H         +   C  C KEFT   ++  H + IH
Sbjct: 11  YRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 63.8 bits (156), Expect = 4e-13
 Identities = 30/92 (32%), Positives = 41/92 (44%), Gaps = 7/92 (7%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
             + H  + P     C+K +  +   K HLR H GEKP  CT+E C   F  S  + +H 
Sbjct: 12  KRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHY 67

Query: 202 RTCHNKPTVNRFPCDKCEKVYSCASSLTKHMK 233
           R  H       F C  C + +S +  L  HMK
Sbjct: 68  RK-HTG--AKPFQCGVCNRSFSRSDHLALHMK 96

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 59.2 bits (144), Expect = 2e-11
 Identities = 20/48 (41%), Positives = 27/48 (56%), Gaps = 2/48 (4%)

Query: 1  WHQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFT 46
           H G K Y+C+   C   F +   L  H+R HTG KPF C +C+R F+
Sbjct: 39 THTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFS 86

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 56.1 bits (136), Expect = 2e-10
 Identities = 26/82 (31%), Positives = 37/82 (45%), Gaps = 4/82 (4%)

Query: 268 IFKCTK--CDKVFQHIQLLNRHQLVHMDTRPYQC--PQCPMAYKTNISLSAHLMKHTGAK 323
           I  C    C KV+     L  H   H   +PY+C    C   +  +  L+ H  KHTGAK
Sbjct: 15  IHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAK 74

Query: 324 PYVCEICNKVLTHRSSLISHYR 345
           P+ C +CN+  +    L  H +
Sbjct: 75  PFQCGVCNRSFSRSDHLALHMK 96

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 50.3 bits (121), Expect = 2e-08
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 4/45 (8%)

Query: 6  KQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCNI--CSRKFT 46
          + + C    C K + +  +LK H R HTGEKP+ C    C  +F 
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFA 58

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 43.0 bits (102), Expect = 9e-06
 Identities = 25/109 (22%), Positives = 38/109 (34%), Gaps = 15/109 (13%)

Query: 190 TFVESWAMRKHVRTCHNKPTVNRFPCDK--CEKVYSCASSLTKHMKARLGRQPVSCDI-- 245
           +   S    +  R            CD   C KVY+ +S L  H++   G +P  C    
Sbjct: 2   SSGSSGPDLEKRRI---------HYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEG 52

Query: 246 CHKEFTHPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMD 293
           C   F     +  H +  H     F+C  C++ F     L  H   H +
Sbjct: 53  CDWRFARSDELTRHYR-KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQN 100

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 42.2 bits (100), Expect = 2e-05
 Identities = 12/33 (36%), Positives = 21/33 (63%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRH 174
           H ++HTG KP  C +C++ F  ++    H++RH
Sbjct: 66  HYRKHTGAKPFQCGVCNRSFSRSDHLALHMKRH 98

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 39.9 bits (94), Expect = 9e-05
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHT 31
          H G K +QC  C ++F++  +L  H + H 
Sbjct: 70 HTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 61.8 bits (151), Expect = 6e-13
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K ++C+ C K+F  KGNL  H RIHTGEK    +
Sbjct: 7  GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TG+KP  C  C K F +  +   H R H GEK    +
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 9/41 (21%), Positives = 16/41 (39%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   +P++C  C  +++   +L  H   HTG K    
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KP+ C  C K    + +L++H R
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQR 33

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 8/25 (32%), Positives = 10/25 (40%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TG+KPF C  C + F     
Sbjct: 3  SGSSGTGQKPFECTHCGKSFRAKGN 27

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 61.4 bits (150), Expect = 7e-13
 Identities = 13/47 (27%), Positives = 22/47 (46%), Gaps = 1/47 (2%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHF-RIHTGEKPFTCNICSRKFTT 47
              K Y C  C K F++  +L  H  ++HT E+P  C +     ++
Sbjct: 7  GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 46.8 bits (112), Expect = 1e-07
 Identities = 12/51 (23%), Positives = 21/51 (41%), Gaps = 3/51 (5%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRR-HKGEKPVTCTFENCTETF 191
                +  KP+ C+ C KGF   +    H+++ H  E+P  C  +      
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGP 51

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 1/47 (2%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK-HTGAKPYVCEICNK 332
                   +PY C  C   +     L+ H+ + HT  +P+ C++   
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVS 49

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 10/24 (41%), Positives = 15/24 (62%), Gaps = 1/24 (4%)

Query: 142 HLKR-HTGEKPHTCELCSKGFLSA 164
           H+K+ HT E+PH C++   G  S 
Sbjct: 31  HIKQVHTSERPHKCQVWVSGPSSG 54

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 11/40 (27%), Positives = 16/40 (40%), Gaps = 1/40 (2%)

Query: 240 PVSCDICHKEFTHPSSVLYHKQSIHNNEI-FKCTKCDKVF 278
           P  C  C K F+ P  +  H + +H +E   KC       
Sbjct: 12  PYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGP 51

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.7 bits (151), Expect = 1e-12
 Identities = 17/45 (37%), Positives = 29/45 (64%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFT 46
           +  ++Y+C +C K+F+   +L +H R HTGEKP+ C+ C + F 
Sbjct: 13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFI 57

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 57.8 bits (141), Expect = 3e-11
 Identities = 23/62 (37%), Positives = 32/62 (51%)

Query: 284 LNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH 343
             R +    + R Y+C +C  ++  +  LS H   HTG KPY C+ C K    RS LI H
Sbjct: 6   SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 344 YR 345
           +R
Sbjct: 66  HR 67

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 54.0 bits (131), Expect = 6e-10
 Identities = 17/35 (48%), Positives = 22/35 (62%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPF 36
          H G K Y+C +C KAF Q+ +L  H R+HTG  P 
Sbjct: 41 HTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 53.2 bits (129), Expect = 1e-09
 Identities = 21/73 (28%), Positives = 32/73 (43%), Gaps = 1/73 (1%)

Query: 254 SSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISL 312
           S      +        +KC +C K F H   L++H+  H   +PY+C +C  A+     L
Sbjct: 3   SGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 313 SAHLMKHTGAKPY 325
             H   HTG+ P 
Sbjct: 63  IGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 45.5 bits (109), Expect = 6e-07
 Identities = 22/73 (30%), Positives = 31/73 (42%), Gaps = 2/73 (2%)

Query: 226 SSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI-FKCTKCDKVFQHIQLL 284
            S  +    +  R+   CD C K F+H S +  H +  H  E  +KC +C K F     L
Sbjct: 4   GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKH-RRTHTGEKPYKCDECGKAFIQRSHL 62

Query: 285 NRHQLVHMDTRPY 297
             H  VH  + P 
Sbjct: 63  IGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 44.7 bits (107), Expect = 1e-06
 Identities = 18/70 (25%), Positives = 27/70 (38%), Gaps = 6/70 (8%)

Query: 138 GHKLHLKR----HTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVE 193
           G      R        + + C+ C K F  +     H R H GEKP  C  + C + F++
Sbjct: 1   GSSGSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQ 58

Query: 194 SWAMRKHVRT 203
              +  H R 
Sbjct: 59  RSHLIGHHRV 68

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 311 SLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           S      +    + Y C+ C K  +H S L  H R
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRR 39

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 41.3 bits (98), Expect = 2e-05
 Identities = 5/31 (16%), Positives = 11/31 (35%)

Query: 19 QKGNLKEHFRIHTGEKPFTCNICSRKFTTYS 49
            G+           + + C+ C + F+  S
Sbjct: 2  SSGSSGRSEWQQRERRRYKCDECGKSFSHSS 32

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 37.4 bits (88), Expect = 4e-04
 Identities = 19/53 (35%), Positives = 28/53 (52%), Gaps = 1/53 (1%)

Query: 215 CDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNE 267
           CD+C K +S +S L+KH +   G +P  CD C K F   S ++ H   +H   
Sbjct: 21  CDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH-HRVHTGS 72

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 62.2 bits (152), Expect = 1e-12
 Identities = 20/56 (35%), Positives = 26/56 (46%), Gaps = 4/56 (7%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE----KPFTCNICSRKFTTYSQVRR 53
          H G K Y CS C K F QK  L  HF+ +         F C+ C + FT  + + R
Sbjct: 10 HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMAR 65

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 61.8 bits (151), Expect = 1e-12
 Identities = 7/44 (15%), Positives = 13/44 (29%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKF 45
          +     + CS+C K F ++  +  H     G             
Sbjct: 42 NFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 57.9 bits (141), Expect = 4e-11
 Identities = 16/77 (20%), Positives = 27/77 (35%), Gaps = 5/77 (6%)

Query: 261 QSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVH----MDTRPYQCPQCPMAYKTNISLSAH 315
              H  E  + C+ CDK F+  QLL+ H   +         + C +C   +    +++ H
Sbjct: 7   GRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARH 66

Query: 316 LMKHTGAKPYVCEICNK 332
                G      E    
Sbjct: 67  ADNCAGPDGVEGENSGP 83

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 54.5 bits (132), Expect = 6e-10
 Identities = 14/66 (21%), Positives = 23/66 (34%), Gaps = 4/66 (6%)

Query: 284 LNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTG----AKPYVCEICNKVLTHRSS 339
                  H   +PY C  C   ++    L  H  ++         +VC  C K  T R++
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 340 LISHYR 345
           +  H  
Sbjct: 63  MARHAD 68

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 54.1 bits (131), Expect = 6e-10
 Identities = 16/81 (19%), Positives = 26/81 (32%), Gaps = 6/81 (7%)

Query: 227 SLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEI-----FKCTKCDKVFQHI 281
           S     +   G +P +C  C K F     +  H    +++       F C+KC K F   
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMH-FKRYHDPNFVPAAFVCSKCGKTFTRR 60

Query: 282 QLLNRHQLVHMDTRPYQCPQC 302
             + RH          +    
Sbjct: 61  NTMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 51.8 bits (125), Expect = 4e-09
 Identities = 21/109 (19%), Positives = 33/109 (30%), Gaps = 29/109 (26%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHV 201
             + HTGEKP+ C  C K F   +    H +R+     V                     
Sbjct: 6   SGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFV--------------------- 44

Query: 202 RTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEF 250
                      F C KC K ++  +++ +H     G   V  +      
Sbjct: 45  ----PAA----FVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 42.5 bits (101), Expect = 1e-05
 Identities = 11/33 (33%), Positives = 16/33 (48%)

Query: 21 GNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          G+     R HTGEKP+ C+ C + F     +  
Sbjct: 1  GSSGSSGRTHTGEKPYACSHCDKTFRQKQLLDM 33

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 39.8 bits (94), Expect = 8e-05
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 311 SLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           S  +    HTG KPY C  C+K    +  L  H++
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK 36

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C +C K +N K NL  H ++HTGE+P   +
Sbjct: 7  GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 6e-07
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ CE C KG+ S  +   H + H GE+P   +
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   +PY+C +C   Y +  +L  H   HTG +P   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY CE C K    + +L  H +
Sbjct: 2   SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK 33

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 60.2 bits (147), Expect = 2e-12
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C  C KAF QK +L +H + HTGEKP   +
Sbjct: 7  GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY+C  C  A+     L+ H   HTG KP    
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C++CSK F        H + H GEKP   +
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 11/32 (34%), Positives = 18/32 (56%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C++C+K  T ++ L  H +
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQK 33

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 2e-12
 Identities = 19/38 (50%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G + Y+CS+C KAF QK  L  H RIH GEKP   +
Sbjct: 7  GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGE+ + C  C K F+   +   H R H+GEKP   +
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 4e-05
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   R Y+C +C  A+    +LS H   H G KP   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG + Y C  C K    +S+L  H R
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQR 33

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 7/26 (26%), Positives = 11/26 (42%)

Query: 25 EHFRIHTGEKPFTCNICSRKFTTYSQ 50
                TGE+ + C+ C + F   S 
Sbjct: 2  SSGSSGTGERHYECSECGKAFIQKST 27

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.8 bits (146), Expect = 3e-12
 Identities = 21/38 (55%), Positives = 25/38 (65%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C +C KAF QK NL +H RIHTGEKP   +
Sbjct: 7  GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F    +   H R H GEKP   +
Sbjct: 3   SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +PY+C +C  A+    +L+ H   HTG KP   
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C K    +++L  H R
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQR 33

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 8/25 (32%), Positives = 11/25 (44%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKP+ C  C + F   + 
Sbjct: 3  SGSSGTGEKPYRCGECGKAFAQKAN 27

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y C++C K F+QK  L  H R HTGEKP   +
Sbjct: 7  GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GEKP+ C  C K F        H R H GEKP   +
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +PY C +C   +     LSAH   HTG KP    
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     +G KPY C  C K  + +S L +H R
Sbjct: 2   SSGSSGSGEKPYGCNECGKTFSQKSILSAHQR 33

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               +GEKP+ CN C + F+  S 
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSI 27

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 3e-12
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G   + CS+C K F  K NL  H +IHTGE+P   +
Sbjct: 7  GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGE P  C  C K F    +   H + H GE+P   +
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/32 (37%), Positives = 19/32 (59%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG  P++C  C KV TH+++LI H +
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQK 33

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 9/41 (21%), Positives = 14/41 (34%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    P+ C +C   +    +L  H   HTG +P   
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGE PF C+ C + FT  + 
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKTN 27

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 59.5 bits (145), Expect = 3e-12
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G+  Y+CSQC K+F+ K  L  H R+HT EKP   +
Sbjct: 7  GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/42 (28%), Positives = 14/42 (33%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                 G  P+ C  C K F        H R H  EKP   +
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 9/27 (33%), Positives = 12/27 (44%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
             G  PY C  C K  + +  L+ H R
Sbjct: 7   GAGVNPYKCSQCEKSFSGKLRLLVHQR 33

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    PY+C QC  ++   + L  H   HT  KP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 4e-12
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+CS C KAF +K  L  H + HTGE+    +
Sbjct: 7  GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F        H + H GE+    +
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS 44

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 10/42 (23%), Positives = 14/42 (33%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +PY+C  C  A+     L  H   HTG +    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KPY C  C K  T +S L  H +
Sbjct: 3   SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQ 33

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 3e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVR 52
               TGEKP+ C+ C + FT  S + 
Sbjct: 3  SGSSGTGEKPYKCSDCGKAFTRKSGLH 29

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.4 bits (145), Expect = 4e-12
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+CS C KAF+ + +L  H RIH+G+KP   +
Sbjct: 7  GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C +C K F   +S   H R H G+KP   +
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY+C  C  A+    SLS H   H+G KP    
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPS 44

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 14/31 (45%), Positives = 16/31 (51%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KPY C +C K  +HR SL  H R
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQR 33

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 9e-04
 Identities = 8/25 (32%), Positives = 13/25 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKP+ C++C + F+    
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQS 27

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 59.0 bits (144), Expect = 4e-12
 Identities = 15/36 (41%), Positives = 16/36 (44%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFT 37
            G K Y C  C   F     LK H RIHTG  P +
Sbjct: 6  SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 51.3 bits (124), Expect = 3e-09
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKP 179
                 GEKP+ CE+C   F   ++ K HLR H G  P
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGP 39

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                  G KPY CEIC     H  +L SH R
Sbjct: 1   GSSGSSGGEKPYPCEICGTRFRHLQTLKSHLR 32

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 8/21 (38%), Positives = 10/21 (47%)

Query: 26 HFRIHTGEKPFTCNICSRKFT 46
                GEKP+ C IC  +F 
Sbjct: 2  SSGSSGGEKPYPCEICGTRFR 22

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 11/39 (28%), Positives = 17/39 (43%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPY 325
                   +PY C  C   ++   +L +HL  HTG+ P 
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 4e-12
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K ++C++C KAF +K  L  H +IHTGEKP   +
Sbjct: 7  GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TG K   C  C K F    +   H + H GEKP   +
Sbjct: 3   SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    + ++C +C  A+    +LS H   HTG KP    
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 313 SAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
            +     TG K + C  C K  T +S+L  H +
Sbjct: 1   GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQK 33

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/25 (36%), Positives = 10/25 (40%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TG K F C  C + FT  S 
Sbjct: 3  SGSSGTGGKHFECTECGKAFTRKST 27

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 60.3 bits (147), Expect = 4e-12
 Identities = 14/46 (30%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 2  HQGIKQYQCSQ--CPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKF 45
          H   K + C +  C K+FN K +LKEH ++H+  + + C       
Sbjct: 33 HIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 56.0 bits (136), Expect = 1e-10
 Identities = 13/80 (16%), Positives = 32/80 (40%), Gaps = 10/80 (12%)

Query: 146 HTGEKPHTCEL--CSKGFLSAESYKCHLR-RHKGEKPVTCTFENCTETFVESWAMRKHVR 202
            +G     C+   C + F + +    H + +H  +K  +C    C ++F     +++H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 203 TCH--NKPTVNRFPCDKCEK 220
             H   +     + C+    
Sbjct: 62  L-HSDTRD----YICEFSGP 76

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 52.9 bits (128), Expect = 1e-09
 Identities = 12/53 (22%), Positives = 19/53 (35%), Gaps = 5/53 (9%)

Query: 2  HQGIKQYQCS--QCPKAFNQKGNLKEHFRI-HTGEKPFTCN--ICSRKFTTYS 49
            G     C    C + F+ +  L  H +  H  +K F+C    C + F    
Sbjct: 2  SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKK 54

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 52.6 bits (127), Expect = 2e-09
 Identities = 17/81 (20%), Positives = 25/81 (30%), Gaps = 8/81 (9%)

Query: 174 HKGEKPVTCTFENCTETFVESWAMRKHVRTCHN--KPTVNRFPCD--KCEKVYSCASSLT 229
             G   + C F  C   F     +  H +  H   K     F C    C K ++    L 
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKS----FSCPEPACGKSFNFKKHLK 57

Query: 230 KHMKARLGRQPVSCDICHKEF 250
           +HMK     +   C+      
Sbjct: 58  EHMKLHSDTRDYICEFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 51.8 bits (125), Expect = 4e-09
 Identities = 17/69 (24%), Positives = 31/69 (44%), Gaps = 5/69 (7%)

Query: 269 FKCTK--CDKVFQHIQLLNRHQ-LVHMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGAK 323
             C    C ++F + Q LN H+   H+  + + CP+  C  ++     L  H+  H+  +
Sbjct: 8   MPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR 67

Query: 324 PYVCEICNK 332
            Y+CE    
Sbjct: 68  DYICEFSGP 76

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 49.1 bits (118), Expect = 4e-08
 Identities = 21/71 (29%), Positives = 32/71 (45%), Gaps = 5/71 (7%)

Query: 237 GRQPVSCDI--CHKEFTHPSSVLYHKQSIHNNEI-FKCT--KCDKVFQHIQLLNRHQLVH 291
           G   + CD   C + F++   + +HK+  H ++  F C    C K F   + L  H  +H
Sbjct: 4   GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLH 63

Query: 292 MDTRPYQCPQC 302
            DTR Y C   
Sbjct: 64  SDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 48.7 bits (117), Expect = 5e-08
 Identities = 11/45 (24%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 146 HTGEKPHTCE--LCSKGFLSAESYKCHLRRHKGEKPVTCTFENCT 188
           H  +K  +C    C K F   +  K H++ H   +   C F   +
Sbjct: 33  HIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPS 77

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 40.6 bits (96), Expect = 3e-05
 Identities = 12/56 (21%), Positives = 18/56 (32%), Gaps = 5/56 (8%)

Query: 295 RPYQC--PQCPMAYKTNISLSAHL-MKHTGAKPYVCE--ICNKVLTHRSSLISHYR 345
               C  P C   +     L+ H   +H   K + C    C K    +  L  H +
Sbjct: 6   SGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 4e-12
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y C++C KAF  + NL +H +IHT +KP   +
Sbjct: 7  GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F    +   H + H  +KP   +
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 14/32 (43%), Positives = 18/32 (56%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY+C  C K  T RS+LI H +
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQK 33

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/42 (26%), Positives = 15/42 (35%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +PY C +C  A+    +L  H   HT  KP    
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKP+ C  C + FT  S 
Sbjct: 3  SGSSGTGEKPYICAECGKAFTIRSN 27

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 4e-12
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C  C K F+Q  +L+ H R+HTGEKP   +
Sbjct: 7  GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                 GEK + C++C K F  +   + H R H GEKP   +
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 11/41 (26%), Positives = 15/41 (36%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                M  + Y+C  C   +  +  L  H   HTG KP   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                 G K Y C++C K  +  S L +H R
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQR 33

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 5e-12
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K ++C++C K F Q  +L  H RIHTGEKP   +
Sbjct: 7  GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                 G+K   C  C K F  + S   H R H GEKP   +
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPS 44

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 11/32 (34%), Positives = 13/32 (40%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +      G K + C  C K  T  SSL  H R
Sbjct: 2   SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQR 33

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/41 (24%), Positives = 17/41 (41%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   + ++C +C   +  + SL+ H   HTG KP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 9/25 (36%), Positives = 11/25 (44%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
                G+K F CN C + FT  S 
Sbjct: 3  SGSSGAGKKLFKCNECKKTFTQSSS 27

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 5e-12
 Identities = 16/38 (42%), Positives = 26/38 (68%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K ++C +C K++NQ+ +L +H R+HTGEKP   +
Sbjct: 7  GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP  C  C K +        H R H GEKP   +
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/42 (26%), Positives = 18/42 (42%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +P++C +C  +Y   + L+ H   HTG KP   
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 8/25 (32%), Positives = 10/25 (40%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKPF C  C + +     
Sbjct: 3  SGSSGTGEKPFKCGECGKSYNQRVH 27

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 5e-12
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+CS C K+F  K  L+ H + HTGE+    +
Sbjct: 7  GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F      + H + H GE+    +
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 9/41 (21%), Positives = 14/41 (34%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   +PY+C  C  ++     L  H   HTG +    
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C K  T +S L  H +
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQK 33

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
               TGEKP+ C+ C + FT  S++R 
Sbjct: 3  SGSSGTGEKPYKCSDCGKSFTWKSRLRI 30

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 5e-12
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C  C KAF+   +L +H R+H+GEKP   +
Sbjct: 7  GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C++C K F    S   H R H GEKP   +
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 13/31 (41%), Positives = 17/31 (54%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KPY C++C K  +H +SL  H R
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQR 33

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +PY+C  C  A+  + SL+ H   H+G KP    
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.1 bits (144), Expect = 5e-12
 Identities = 15/38 (39%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C++C KAF  + +L  H   H+GEKP   +
Sbjct: 7  GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F +  S   H   H GEKP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 12/42 (28%), Positives = 19/42 (45%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +PY+C +C  A++   SL+ H   H+G KP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/31 (41%), Positives = 13/31 (41%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KPY C  C K    RSSL  H  
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQA 33

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKP+ CN C + F   S 
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRARSS 27

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 59.0 bits (144), Expect = 5e-12
 Identities = 18/37 (48%), Positives = 22/37 (59%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
            G K Y+C++C KAFN K NL  H R HTGE   + 
Sbjct: 7  GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 43.2 bits (103), Expect = 2e-06
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                TGEKP+ C  C K F +  +   H R H GE   + 
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   +PY+C +C  A+ T  +L  H   HTG      
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKP+ CN C + F T S 
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSN 27

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C K    +S+L+ H R
Sbjct: 2   SSGSSGTGEKPYECNECQKAFNTKSNLMVHQR 33

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 59.0 bits (144), Expect = 5e-12
 Identities = 18/38 (47%), Positives = 24/38 (63%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C++C K F Q  +L  H+RIHTGEKP   +
Sbjct: 7  GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GEKP+ C  C K F        H R H GEKP   +
Sbjct: 3   SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +PY+C +C   +  N  L+ H   HTG KP   
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     +G KPY C  C KV T  S L +H+R
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWR 33

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 58.7 bits (143), Expect = 5e-12
 Identities = 15/38 (39%), Positives = 19/38 (50%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K + CS C KAF+ K  L  H + H  EKP   +
Sbjct: 5  SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
            +GEKP  C  C K F S      H + H  EKP   +
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPS 42

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 9/27 (33%), Positives = 15/27 (55%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
            +G KP+ C  C K  + +S L+ H +
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQ 31

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 19/38 (50%), Positives = 24/38 (63%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C++C KAF+Q   L  H RIHTGEKP   +
Sbjct: 7  GTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F        H R H GEKP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY+C +C  A+     L+ H   HTG KP    
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 13/31 (41%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KPY C  C K  +  S L  H R
Sbjct: 3   SGSSGTGEKPYKCNECGKAFSQTSKLARHQR 33

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 11/28 (39%), Positives = 16/28 (57%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
               TGEKP+ CN C + F+  S++ R
Sbjct: 3  SGSSGTGEKPYKCNECGKAFSQTSKLAR 30

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+CS+C KAF++  +L EH RIHTG +P   +
Sbjct: 7  GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 7e-06
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GEKP+ C  C K F        H R H G +P   +
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY+C +C  A+  +  L+ H   HTG +P    
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 10/31 (32%), Positives = 12/31 (38%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                +G KPY C  C K     + L  H R
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRR 33

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C++C K F Q  +L  H RIHTG KP   +
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F        H R H G KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY+C +C   +  N  L+ H   HTG KP    
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPS 44

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C KV T  S L +H R
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQR 33

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
               TGEKP+ CN C + FT  S +  
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLAN 30

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K +QC +C K F Q  +L  H R+HTGEKP   +
Sbjct: 7  GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GEKP  CE C K F        H R H GEKP   +
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +P+QC +C   +  N  L +H   HTG KP   
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 25 EHFRIHTGEKPFTCNICSRKFTTYSQ 50
                +GEKPF C  C ++FT  S 
Sbjct: 2  SSGSSGSGEKPFQCEECGKRFTQNSH 27

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                +G KP+ CE C K  T  S L SH R
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQR 33

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K ++C +C KAF Q  +L  H RIHTGEKP   +
Sbjct: 7  GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 5e-06
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +P++C +C  A++ NI L++HL  HTG KP    
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GEKP  C+ C K F        HLR H GEKP   +
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 7e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     +G KP+ C+ C K       L SH R
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLR 33

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 8/25 (32%), Positives = 10/25 (40%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               +GEKPF C  C + F     
Sbjct: 3  SGSSGSGEKPFKCKECGKAFRQNIH 27

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 18/38 (47%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+CS C K+F +K  L  H +IHTGEKP   +
Sbjct: 7  GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C +C K F        H + H GEKP   +
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 11/42 (26%), Positives = 15/42 (35%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +PY+C  C  ++     L  H   HTG KP   
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 5e-05
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KPY C IC K  T +S L  H +
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQ 33

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/25 (48%), Positives = 15/25 (60%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKP+ C+IC + FT  SQ
Sbjct: 3  SGSSGTGEKPYECSICGKSFTKKSQ 27

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G + Y C+ C KAF  + NL +H +IHTGEKP   +
Sbjct: 7  GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                TGE+P+ C +C K F    +   H + H GEKP   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    RPY C  C  A+    +L  H   HTG KP   
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG +PY+C +C K  T RS+LI H +
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQK 33

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGE+P+ C +C + FT  S 
Sbjct: 3  SGSSGTGERPYICTVCGKAFTDRSN 27

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 6e-12
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C +C K + ++ +L  H R+HTGEK    +
Sbjct: 7  GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GEKP+ C  C KG+        H R H GEK    +
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   +PY+C +C   YK  + L  H   HTG K    
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 13/32 (40%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     +G KPY C  C K    R  L  H R
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQR 33

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 19/38 (50%), Positives = 24/38 (63%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K YQC++C KAF+Q   L  H R+HTGEKP   +
Sbjct: 7  GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 6e-06
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TG KP+ C  C K F        H R H GEKP   +
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +PYQC +C  A+     L+ H   HTG KP    
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPS 44

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C K  +  S L  H R
Sbjct: 2   SSGSSGTGGKPYQCNECGKAFSQTSKLARHQR 33

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.6 bits (143), Expect = 7e-12
 Identities = 20/37 (54%), Positives = 23/37 (62%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
            G K ++CS+C KAFN K NL  H R HTGEKP   
Sbjct: 7  GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP  C  C K F +  +   H R H GEKP   +
Sbjct: 3   SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 12/43 (27%), Positives = 18/43 (41%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +P++C +C  A+ T  +L  H   HTG KP    
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS 44

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.8 bits (89), Expect = 1e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KP+ C  C K    +S+LI H R
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR 33

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKPF C+ C + F T S 
Sbjct: 3  SGSSGTGEKPFECSECQKAFNTKSN 27

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 14/38 (36%), Positives = 20/38 (52%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
              K Y+C  C K +N++ NL  H R+H GEK    +
Sbjct: 7  GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                + EKP+ CE C KG+    +   H R H GEK    +
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   +PY+C  C   Y   ++L  H   H G K    
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 1e-04
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     +  KPY CE C K    R +L  H R
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQR 33

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 5/25 (20%), Positives = 9/25 (36%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               + EKP+ C  C + +     
Sbjct: 3  SGSSGSVEKPYKCEDCGKGYNRRLN 27

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G   Y+C +C KAF++K  L  H R H GEKP   +
Sbjct: 7  GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGE P+ C  C K F        H R H GEKP   +
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/42 (26%), Positives = 15/42 (35%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                     PY+C +C  A+     L +H   H G KP   
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 7e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG  PY C  C K  + +  LISH R
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQR 33

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 18/38 (47%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G+K Y CSQC K F+ K  L  H R HTG KP   +
Sbjct: 7  GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TG KP+ C  C+K F        H R H G KP   +
Sbjct: 3   SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 14/42 (33%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +PY C QC   +     L  H   HTG KP   
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C K  + +S LI H R
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR 33

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 9/25 (36%), Positives = 14/25 (56%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TG KP+ C+ C++ F+  SQ
Sbjct: 3  SGSSGTGVKPYGCSQCAKTFSLKSQ 27

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 17/38 (44%), Positives = 24/38 (63%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C+QC KAF+ + +L  H  IHTG+KP   +
Sbjct: 7  GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F    S   H   H G+KP   +
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 1e-05
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY+C QC  A+    SL+ H   HTG KP    
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KPY C  C K  + RSSL +H  
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQA 33

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKP+ CN C + F+  S 
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSS 27

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.7 bits (143), Expect = 7e-12
 Identities = 19/38 (50%), Positives = 24/38 (63%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G + Y+CS+C KAF +K  L  H RIHTGEKP   +
Sbjct: 7  GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGE+ + C  C K F    +   H R H GEKP   +
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS 44

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    R Y+C +C  A+    +L  H   HTG KP   
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 8e-05
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG + Y C  C K    +S+LI H R
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQR 33

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 7/26 (26%), Positives = 11/26 (42%)

Query: 25 EHFRIHTGEKPFTCNICSRKFTTYSQ 50
                TGE+ + C+ C + F   S 
Sbjct: 2  SSGSSGTGERHYECSECGKAFARKST 27

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 58.3 bits (142), Expect = 8e-12
 Identities = 18/38 (47%), Positives = 25/38 (65%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C +C KAF+Q  +L +H R+HTGEKP   +
Sbjct: 7  GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 42.1 bits (100), Expect = 4e-06
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C+ C K F        H R H GEKP   +
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +PY+C +C  A+     L  H   HTG KP   
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 12/31 (38%), Positives = 15/31 (48%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KPY C+ C K  +  + LI H R
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQR 33

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 58.4 bits (142), Expect = 8e-12
 Identities = 13/36 (36%), Positives = 18/36 (50%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFT 37
            G   Y C QC K+F Q+G+L  H R  +   P +
Sbjct: 6  SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 41.9 bits (99), Expect = 6e-06
 Identities = 11/34 (32%), Positives = 12/34 (35%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKP 179
             GE P+ C  C K F    S   H R      P
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGP 39

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 37.6 bits (88), Expect = 2e-04
 Identities = 12/27 (44%), Positives = 13/27 (48%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
             G  PY+C  C K  T R SL  H R
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQR 32

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 8e-12
 Identities = 19/38 (50%), Positives = 24/38 (63%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y C++C K+F QK +L  H RIHTGEKP   +
Sbjct: 7  GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F+       H R H GEKP   +
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +PY C +C  ++     L+ H   HTG KP    
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY+C  C K    +S L  H R
Sbjct: 2   SSGSSGTGEKPYICNECGKSFIQKSHLNRHRR 33

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
               TGEKP+ CN C + F   S + R
Sbjct: 3  SGSSGTGEKPYICNECGKSFIQKSHLNR 30

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 9e-12
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C++C KAF    NL  H  IHTGEKP   +
Sbjct: 7  GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F +  +   H   H GEKP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 12/42 (28%), Positives = 21/42 (50%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +PY+C +C  A++ + +L+ H + HTG KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPS 44

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C K     S+L +H  
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQV 33

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKP+ CN C + F  +S 
Sbjct: 3  SGSSGTGEKPYKCNECGKAFRAHSN 27

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 9e-12
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K ++C +C K F Q   L  H R+HTGEKP   +
Sbjct: 7  GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GEKP  CE C K F        H R H GEKP   +
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +P++C +C   +  N  L +H   HTG KP   
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                +G KP+ CE C K  T  S L SH R
Sbjct: 3   SGSSGSGEKPFKCEECGKRFTQNSQLHSHQR 33

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 11/28 (39%), Positives = 15/28 (53%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
               +GEKPF C  C ++FT  SQ+  
Sbjct: 3  SGSSGSGEKPFKCEECGKRFTQNSQLHS 30

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 58.4 bits (142), Expect = 9e-12
 Identities = 17/36 (47%), Positives = 23/36 (63%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFT 37
            G + Y+C +C K+F QKG+L  H RIHTG  P +
Sbjct: 5  SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 38.7 bits (91), Expect = 6e-05
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKP 179
            +G++ + C+ C K F    S   H R H G  P
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGP 38

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 9/27 (33%), Positives = 13/27 (48%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
            +G + Y C+ C K    + SL  H R
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHER 31

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 58.3 bits (142), Expect = 9e-12
 Identities = 19/36 (52%), Positives = 24/36 (66%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFT 37
            G K Y+C QC KAF+QKG+L  H R+HTG  P +
Sbjct: 6  SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/38 (36%), Positives = 17/38 (44%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKP 179
                 GEKP+ C+ C K F    S   H+R H G  P
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGP 39

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                  G KPY C+ C K  + + SLI H R
Sbjct: 1   GSSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR 32

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPY 325
                   +PY+C QC  A+    SL  H+  HTG+ P 
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.0 bits (84), Expect = 6e-04
 Identities = 7/25 (28%), Positives = 11/25 (44%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
                GEKP+ C+ C + F+    
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGS 26

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 9e-12
 Identities = 15/38 (39%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y C +C K+F++   L +H R+H+GEKP   +
Sbjct: 7  GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 7e-07
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEK + C+ C K F  A     H R H GEKP   +
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 7e-05
 Identities = 9/41 (21%), Positives = 14/41 (34%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   + Y C +C  ++     L  H   H+G KP   
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 9e-05
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG K Y C+ C K  +    L+ H R
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHER 33

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 8e-04
 Identities = 7/25 (28%), Positives = 10/25 (40%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEK + C  C + F+    
Sbjct: 3  SGSSGTGEKLYNCKECGKSFSRAPC 27

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 9e-12
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C +C K F Q G+L +H R+HTGE+    +
Sbjct: 7  GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                +G+KP+ C+ C K F+       H R H GE+    
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 9/43 (20%), Positives = 15/43 (34%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY+C +C   +     L+ H   HTG +     
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.6 bits (83), Expect = 9e-04
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     +G KPY C+ C K       L  H R
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKR 33

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 58.3 bits (142), Expect = 9e-12
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C  C K+F    +L  H RIHTGEKP   +
Sbjct: 7  GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 7e-07
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C++C K F    S   H R H GEKP   +
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPS 44

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 7e-05
 Identities = 13/32 (40%), Positives = 18/32 (56%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C++C+K   + SSL  H R
Sbjct: 2   SSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQR 33

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   +PY+C  C  +++   SL+ H   HTG KP   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 9/25 (36%), Positives = 13/25 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKP+ C++C + F   S 
Sbjct: 3  SGSSGTGEKPYKCDVCHKSFRYGSS 27

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 58.0 bits (141), Expect = 1e-11
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y C +C K+F     L +H R+H+GEKP   +
Sbjct: 7  GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 44.5 bits (106), Expect = 7e-07
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C+ C K F  A     H R H GEKP   +
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.2 bits (100), Expect = 4e-06
 Identities = 10/43 (23%), Positives = 16/43 (37%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY C +C  +++    L  H   H+G KP    
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C+ C K     S L+ H R
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQR 33

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 13/38 (34%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K ++C +C   F+Q  +L+ H  +H GEKP   +
Sbjct: 7  GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 16/42 (38%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                 GEK   C  C   F  A S + H   H GEKP   +
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                M  + ++C +C M +    SL  H   H G KP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 8/32 (25%), Positives = 12/32 (37%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +      G K + C  C+   +  SSL  H  
Sbjct: 2   SSGSSGMGEKTWKCRECDMCFSQASSLRLHQN 33

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 13/42 (30%), Positives = 17/42 (40%), Gaps = 1/42 (2%)

Query: 261 QSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ 301
            S    E  +KC +CD  F     L  HQ VH+  +P     
Sbjct: 4   GSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/38 (42%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C++C K F Q  +L  H R+HTG KP   +
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F        H R H G KP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +PY+C +C   +  N  L+ H   HTG KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K+Y+C++C K F++   L +H +IHTGEKP   +
Sbjct: 7  GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEK + C  C K F        H + H GEKP   +
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    + Y+C +C   +  N  LS H   HTG KP    
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPS 44

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG K Y C  C KV +  S L  H +
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQK 33

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 18/37 (48%), Positives = 23/37 (62%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
            G K Y+C++C KAF  + NL  H +IHTGEKP   
Sbjct: 7  GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 15/41 (36%), Positives = 18/41 (43%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                TGEKP+ C  C K F    +   H + H GEKP   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY+C +C  A+    +L  H   HTG KP    
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 13/32 (40%), Positives = 17/32 (53%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C K  T RS+L +H +
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQK 33

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKP+ C  C + FT  S 
Sbjct: 3  SGSSGTGEKPYRCAECGKAFTDRSN 27

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C++C K F Q  +L  H  IHTGEKP   +
Sbjct: 7  GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TG+KP+ C  C K F        H   H GEKP   +
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +PY+C +C   +  N  L+ H   HTG KP    
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C KV T  S L  H  
Sbjct: 2   SSGSSGTGKKPYKCNECGKVFTQNSHLARHRG 33

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 13/38 (34%), Positives = 19/38 (50%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K ++C  C K+F  +  L  H  +HT EKP   +
Sbjct: 7  GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP  C++C K F        H   H  EKP   +
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 10/42 (23%), Positives = 16/42 (38%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +P++C  C  ++     L+ H M HT  KP    
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KP+ C+IC K    RS L  H  
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSM 33

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
               TGEKPF C+IC + F   S++ R
Sbjct: 3  SGSSGTGEKPFKCDICGKSFCGRSRLNR 30

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C++C K F Q  +L  H  IHTGEKP   +
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 6e-06
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F        H   H GEKP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.5 bits (96), Expect = 2e-05
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY+C +C   +  N  L  H   HTG KP    
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 13/32 (40%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C KV T  S L+ H  
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRG 33

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
               TGEKP+ CN C + FT  S + R
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLVR 30

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 11/38 (28%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G + ++C++C K F ++ +L  H R+H+ EK    +
Sbjct: 7  GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GE+P  C  C KGF        HLR H  EK    +
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPS 44

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 9/42 (21%), Positives = 15/42 (35%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    RP++C +C   +     L+ HL  H+  K    
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.0 bits (84), Expect = 7e-04
 Identities = 10/27 (37%), Positives = 13/27 (48%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
            +G +P+ C  C K    RS L  H R
Sbjct: 7   GSGERPFKCNECGKGFGRRSHLAGHLR 33

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.9 bits (141), Expect = 1e-11
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C  C KAF    +L +H  +H+GE+P   +
Sbjct: 7  GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C++C K F  +     H   H GE+P   +
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +PY+C  C  A++ +  L  H   H+G +P   
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KPY C++C K     S L+ H+ 
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHS 33

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 19/38 (50%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y C +C KAF     L+EH RIHTGEKP   +
Sbjct: 7  GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ CE C K F+     + H R H GEKP   +
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 12/43 (27%), Positives = 16/43 (37%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY C +C  A+  +  L  H   HTG KP    
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS 44

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 5e-05
 Identities = 14/32 (43%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY CE C K   H S L  H R
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQR 33

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 16/38 (42%), Positives = 25/38 (65%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G + ++C++C K+F Q  +L +H RIHTGEKP   +
Sbjct: 7  GTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGE+PH C  C K F+ +     H R H GEKP   +
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 3e-05
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    RP++C +C  ++  +  L  H   HTG KP    
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 10/31 (32%), Positives = 13/31 (41%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG +P+ C  C K     + LI H R
Sbjct: 3   SGSSGTGERPHKCNECGKSFIQSAHLIQHQR 33

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 16/37 (43%), Positives = 20/37 (54%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
            G   Y+CS+C KAFN+K  L  H R H GE   + 
Sbjct: 5  SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.6 bits (96), Expect = 1e-05
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 144 KRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
              +GE P+ C  C K F   +    H R H GE   + 
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/27 (40%), Positives = 13/27 (48%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
            +G  PY C  C K    +  LISH R
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQR 31

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 1e-11
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C++C K F Q  +L  H  IHTGEKP   +
Sbjct: 7  GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 8e-06
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F        H   H GEKP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +PY+C +C   +  N  L+ H   HTG KP    
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 7e-04
 Identities = 12/28 (42%), Positives = 15/28 (53%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
               TGEKP+ CN C + FT  S + R
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLAR 30

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 13/32 (40%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C KV T  S L  H  
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLARHRG 33

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 16/37 (43%), Positives = 20/37 (54%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
            G+K Y C++C KAF  K  L  H R HTGE   + 
Sbjct: 7  GTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 8e-07
 Identities = 14/41 (34%), Positives = 16/41 (39%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                TG KP+ C  C K F S      H R H GE   + 
Sbjct: 3   SGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.5 bits (96), Expect = 2e-05
 Identities = 10/42 (23%), Positives = 15/42 (35%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +PY C +C  A+++   L  H   HTG      
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 14/32 (43%), Positives = 16/32 (50%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPYVC  C K    +S LI H R
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR 33

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.9 bits (84), Expect = 6e-04
 Identities = 9/24 (37%), Positives = 12/24 (50%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYS 49
               TG KP+ CN C + F + S
Sbjct: 3  SGSSGTGMKPYVCNECGKAFRSKS 26

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G + Y+C +C KAF  K +L  H R HTGEKP   +
Sbjct: 7  GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TG++P+ C  C K F +  S  CH R H GEKP   +
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    RPY+C +C  A+KT  SL  H   HTG KP   
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 5e-05
 Identities = 13/31 (41%), Positives = 15/31 (48%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG +PY C  C K    +SSLI H R
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRR 33

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.6 bits (140), Expect = 2e-11
 Identities = 18/38 (47%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+CS C K+F +K  L  H RIHTGE P   +
Sbjct: 7  GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPS 44

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 15/41 (36%), Positives = 17/41 (41%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                TGEKP+ C  C K F+       H R H GE P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   +PY+C  C  ++     L  H   HTG  P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C K    +S L  H R
Sbjct: 2   SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQR 33

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKP+ C+ C + F   SQ
Sbjct: 3  SGSSGTGEKPYECSDCGKSFIKKSQ 27

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 16/38 (42%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C +C K F +  +L  H  IHTGEKP   +
Sbjct: 7  GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 9e-06
 Identities = 15/42 (35%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F        H   H GEKP   +
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 1e-05
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY+C +C   ++ N  L+ H + HTG KP    
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 35.9 bits (84), Expect = 8e-04
 Identities = 12/32 (37%), Positives = 13/32 (40%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C KV    S L  H  
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQL 33

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 17/38 (44%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G+K Y C++C KAF+   +L  H  IHTGEKP   +
Sbjct: 7  GTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY C +C  A+    SL+ H + HTG KP    
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 15/41 (36%), Positives = 16/41 (39%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                TG KP+ C  C K F    S   H   H GEKP   
Sbjct: 3   SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 12/32 (37%), Positives = 16/32 (50%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY+C  C K  +  SSL +H  
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQV 33

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 5e-04
 Identities = 10/25 (40%), Positives = 13/25 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TG KP+ CN C + F+ YS 
Sbjct: 3  SGSSGTGVKPYMCNECGKAFSVYSS 27

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.5 bits (140), Expect = 2e-11
 Identities = 18/38 (47%), Positives = 19/38 (50%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y C  C KAF     L  H RIHTGEKP   +
Sbjct: 7  GSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GEKP+ C+ C K F  +     H R H GEKP   +
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPS 44

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 15/42 (35%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +PY C  C  A+  +  L  H   HTG KP   
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 11/31 (35%), Positives = 15/31 (48%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                +G KPYVC+ C K     + L+ H R
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQR 33

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C++C K F     L  H RIHTGEKP   +
Sbjct: 7  GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 4e-06
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F        H R H GEKP   +
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY+C +C   ++ N  LS H   HTG KP    
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 14/31 (45%), Positives = 14/31 (45%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KPY C  C KV  H S L  H R
Sbjct: 3   SGSSGTGEKPYKCNECGKVFRHNSYLSRHQR 33

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/28 (39%), Positives = 14/28 (50%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
               TGEKP+ CN C + F   S + R
Sbjct: 3  SGSSGTGEKPYKCNECGKVFRHNSYLSR 30

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C +C K F  + +L  H  +HTGEKP   +
Sbjct: 7  GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 5e-07
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ CE C KGF+       H   H GEKP   +
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 16/42 (38%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +PY+C +C   +     L  H M HTG KP    
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY CE C K    R  L +H+ 
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHM 33

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 16/38 (42%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
           +G K YQCS+C K+F+    L +H+  HT EKP   +
Sbjct: 7  GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 3e-06
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                 GEKP+ C  C K F  +     H   H  EKP   +
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.1 bits (92), Expect = 6e-05
 Identities = 11/41 (26%), Positives = 18/41 (43%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   +PYQC +C  ++  +  L+ H + HT  KP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 9/32 (28%), Positives = 12/32 (37%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +      G KPY C  C K  +    L  H+ 
Sbjct: 2   SSGSSGEGEKPYQCSECGKSFSGSYRLTQHWI 33

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 2e-11
 Identities = 14/38 (36%), Positives = 19/38 (50%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y C+ C KAF    +L +H R+HT E     +
Sbjct: 7  GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 1e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP++C +C K F+ +     HLR H  E     +
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 10/43 (23%), Positives = 14/43 (32%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY C  C  A+  +  L+ HL  HT        
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 9/26 (34%), Positives = 14/26 (53%)

Query: 25 EHFRIHTGEKPFTCNICSRKFTTYSQ 50
                TGEKP++CN+C + F   + 
Sbjct: 2  SSGSSGTGEKPYSCNVCGKAFVLSAH 27

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/31 (35%), Positives = 13/31 (41%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KPY C +C K     + L  H R
Sbjct: 3   SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLR 33

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.2 bits (139), Expect = 2e-11
 Identities = 14/38 (36%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K Y+C +C KAF    +  +H R+HTG++P   +
Sbjct: 7  GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP+ C  C K F    S   H R H G++P   +
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 18/42 (42%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +PY+C +C  A+  N S + H   HTG +P    
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 12/32 (37%), Positives = 13/32 (40%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C K     SS   H R
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQR 33

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 14/38 (36%), Positives = 23/38 (60%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K ++C +C K F+++  L  H ++HTGEKP   +
Sbjct: 7  GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 44.4 bits (106), Expect = 6e-07
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP  C  C KGF    +   H + H GEKP   +
Sbjct: 3   SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPS 44

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 38.7 bits (91), Expect = 8e-05
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +P++C +C   +    +L+ H   HTG KP   
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 11/32 (34%), Positives = 17/32 (53%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KP+ C  C K  + RS+L  H++
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK 33

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 36.3 bits (85), Expect = 6e-04
 Identities = 10/25 (40%), Positives = 12/25 (48%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKPF C  C + F+  S 
Sbjct: 3  SGSSGTGEKPFKCVECGKGFSRRSA 27

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 14/36 (38%), Positives = 18/36 (50%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFT 37
            G K Y+C  C   F Q  +L+ H  IHTG  P +
Sbjct: 6  SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.4 bits (111), Expect = 1e-07
 Identities = 12/38 (31%), Positives = 16/38 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKP 179
                 GEKP+ CE C   F+     + H+  H G  P
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGP 39

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.4 bits (93), Expect = 4e-05
 Identities = 9/31 (29%), Positives = 11/31 (35%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                 G KPY CE C       + L +H  
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVL 32

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.3 bits (85), Expect = 4e-04
 Identities = 8/28 (28%), Positives = 12/28 (42%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
                GEKP+ C  C  +F   + +R 
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRA 29

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 57.1 bits (139), Expect = 3e-11
 Identities = 17/38 (44%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K + C  C KAF+    L +H RIHTGEKP   +
Sbjct: 7  GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 16/42 (38%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP  C  C K F        H R H GEKP   +
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 2e-05
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +P+ C  C  A+  +I L+ H   HTG KP    
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 13/32 (40%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KP+ C  C K  +    L  H R
Sbjct: 2   SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR 33

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKPF C  C + F+ +  
Sbjct: 3  SGSSGTGEKPFDCIDCGKAFSDHIG 27

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K  +C++C KAF  K  L  H R H  +K    +
Sbjct: 7  GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 15/42 (35%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP  C  C K F        H R H  +K    +
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPS 44

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 2e-04
 Identities = 12/32 (37%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KP  C  C K    +S LI H R
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQR 33

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 8/42 (19%), Positives = 12/42 (28%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +P +C +C  A+     L  H   H   K    
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 15/38 (39%), Positives = 21/38 (55%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K ++C +C K+F+    L  H RIHTGE P   +
Sbjct: 7  GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 16/42 (38%), Positives = 17/42 (40%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKPH C  C K F        H R H GE P   +
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPS 44

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 10/42 (23%), Positives = 16/42 (38%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +P++C +C  ++  N  L  H   HTG  P   
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 12/31 (38%), Positives = 14/31 (45%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KP+ C  C K  +  S LI H R
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQR 33

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.8 bits (138), Expect = 3e-11
 Identities = 18/37 (48%), Positives = 21/37 (56%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
            G K Y CS+C KAF+ K  L  H R H+GEKP   
Sbjct: 7  GAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 16/42 (38%), Positives = 19/42 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                 GEKP+ C  C K F S      H+R H GEKP   +
Sbjct: 3   SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 11/43 (25%), Positives = 17/43 (39%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +PY C +C  A+ +   L  H+  H+G KP    
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 3e-04
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +      G KPY C  C K  + +S LI H R
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMR 33

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.4 bits (137), Expect = 4e-11
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
              K +QC +C + F  K +L +H RIHTGEKP   
Sbjct: 7  GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 16/42 (38%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +  K H C  C +GF        H R H GEKP   +
Sbjct: 3   SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPS 44

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 12/27 (44%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
            +  K + C  C +  T +S L  H R
Sbjct: 7   GSSTKSHQCHECGRGFTLKSHLNQHQR 33

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.4 bits (85), Expect = 6e-04
 Identities = 11/42 (26%), Positives = 16/42 (38%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   T+ +QC +C   +     L+ H   HTG KP   
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.4 bits (137), Expect = 5e-11
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K ++C +C K F        H R H+GEKP   +
Sbjct: 7  GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 5e-07
 Identities = 17/42 (40%), Positives = 20/42 (47%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GEKP  CE C KGF +      H R H GEKP   +
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 9e-06
 Identities = 10/42 (23%), Positives = 17/42 (40%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                   +P++C +C   + TN    +H   H+G KP    
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 11/32 (34%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     +G KP+ CE C K     S   SH R
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQR 33

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 11/28 (39%), Positives = 13/28 (46%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
               +GEKPF C  C + F T SQ   
Sbjct: 3  SGSSGSGEKPFKCEECGKGFYTNSQCYS 30

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 56.4 bits (137), Expect = 5e-11
 Identities = 16/37 (43%), Positives = 22/37 (59%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
            G K ++C++C K+F+    L  H RIHTGEKP   
Sbjct: 7  GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 43.6 bits (104), Expect = 1e-06
 Identities = 16/42 (38%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP  C  C K F  +     H R H GEKP   +
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 41.3 bits (98), Expect = 9e-06
 Identities = 10/43 (23%), Positives = 18/43 (41%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE 328
                    +P++C +C  ++  +  L+ H   HTG KP    
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 37.5 bits (88), Expect = 2e-04
 Identities = 11/31 (35%), Positives = 14/31 (45%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KP+ C  C K  +  S L +H R
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQR 33

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/25 (44%), Positives = 13/25 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               TGEKPF C  C + F+  SQ
Sbjct: 3  SGSSGTGEKPFECAECGKSFSISSQ 27

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 17/38 (44%), Positives = 22/38 (57%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G + ++CS C K F Q  N  +H RIHTGEKP   +
Sbjct: 7  GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 2e-06
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                 GE+ H C  C K FL A ++  H R H GEKP   +
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 8/31 (25%), Positives = 11/31 (35%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                 G + + C  C K     S+ I H R
Sbjct: 3   SGSSGHGERGHRCSDCGKFFLQASNFIQHRR 33

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 9/42 (21%), Positives = 13/42 (30%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    R ++C  C   +    +   H   HTG KP   
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 56.0 bits (136), Expect = 5e-11
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
            G K Y+C++C KAF  K  L  H R H G    + 
Sbjct: 7  GSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 3e-06
 Identities = 12/41 (29%), Positives = 16/41 (39%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                +GEKP+ C  C K F+       H R H G    + 
Sbjct: 3   SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 9/42 (21%), Positives = 13/42 (30%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                    +PY+C +C  A+     L  H   H G      
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     +G KPY C  C K    +S LI H R
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHER 33

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.4 bits (85), Expect = 5e-04
 Identities = 9/25 (36%), Positives = 12/25 (48%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQ 50
               +GEKP+ CN C + F   S 
Sbjct: 3  SGSSGSGEKPYECNECGKAFIWKSL 27

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
            G   Y+C +C K F++K  L  H + H+G+   + 
Sbjct: 7  GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.8 bits (94), Expect = 3e-05
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                TGE P+ C  C K F   +    H + H G+   + 
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.7 bits (86), Expect = 4e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
            TG  PY C  C KV + +  L+SH +
Sbjct: 7   GTGENPYECCECGKVFSRKDQLVSHQK 33

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 1e-10
 Identities = 12/38 (31%), Positives = 19/38 (50%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G + Y C++C K F +  +L EH + H  EK    +
Sbjct: 7  GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GE+P+ C  C K F        HL+RH  EK    +
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 1e-04
 Identities = 10/41 (24%), Positives = 14/41 (34%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   RPY C +C   +  +  L  HL +H   K    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 2e-10
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
            G K +QC +C   F+   +L +H R H    P   
Sbjct: 7  GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.2 bits (113), Expect = 8e-08
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                TGEKP  C+ C   F  + S   HLR H+   P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.9 bits (94), Expect = 3e-05
 Identities = 11/41 (26%), Positives = 16/41 (39%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC 327
                   +P+QC +C M +  + SL  HL  H    P   
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KP+ C+ C    +   SL  H R
Sbjct: 2   SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLR 33

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 54.3 bits (131), Expect = 4e-10
 Identities = 19/64 (29%), Positives = 29/64 (45%), Gaps = 2/64 (3%)

Query: 142 HLKRHTGEKPHTC--ELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRK 199
                +  + H C    C K +  +   K H R H GEKP +C+++ C   F  S  + +
Sbjct: 8   PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67

Query: 200 HVRT 203
           H RT
Sbjct: 68  HRRT 71

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 50.5 bits (121), Expect = 9e-09
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 2  HQGIKQYQCSQ--CPKAFNQKGNLKEHFRIHTGEKPFTCNI--CSRKFTTYSQVRR 53
             I+ + CS   C K + +  +LK H R HTGEKPF+C+   C R+F    ++ R
Sbjct: 12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 41.6 bits (98), Expect = 1e-05
 Identities = 19/66 (28%), Positives = 26/66 (39%), Gaps = 4/66 (6%)

Query: 284 LNRHQLVHMDTRPYQC--PQCPMAYKTNISLSAHLMKHTGAKPYVC--EICNKVLTHRSS 339
            +  Q+     R + C  P C   Y  +  L AH   HTG KP+ C  + C +       
Sbjct: 5   SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64

Query: 340 LISHYR 345
           L  H R
Sbjct: 65  LSRHRR 70

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 18/48 (37%), Positives = 24/48 (50%), Gaps = 7/48 (14%)

Query: 129 SKSSHKIYLGHKLHLKRHTGEKPHTC--ELCSKGFLSAESYKCHLRRH 174
            KSSH      K H + HTGEKP +C  + C + F  ++    H R H
Sbjct: 30  FKSSHL-----KAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 37.4 bits (87), Expect = 4e-04
 Identities = 16/72 (22%), Positives = 30/72 (41%), Gaps = 9/72 (12%)

Query: 166 SYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHN--KPTVNRFPCD--KCEKV 221
                       +   C+   C +T+ +S  ++ H RT H   KP    F C    CE+ 
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRT-HTGEKP----FSCSWKGCERR 58

Query: 222 YSCASSLTKHMK 233
           ++ +  L++H +
Sbjct: 59  FARSDELSRHRR 70

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 53.7 bits (130), Expect = 4e-10
 Identities = 18/39 (46%), Positives = 23/39 (58%), Gaps = 1/39 (2%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFR-IHTGEKPFTCN 39
            G K Y+C +C KAF Q  +L  H+R  HTGEKP   +
Sbjct: 7  GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 41.0 bits (97), Expect = 1e-05
 Identities = 16/43 (37%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRR-HKGEKPVTCT 183
                TG+KP+ C  C K F+   S   H R  H GEKP   +
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPS 45

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.5 bits (93), Expect = 4e-05
 Identities = 13/32 (40%), Positives = 16/32 (50%)

Query: 314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           +     TG KPY C  C K     +SLI H+R
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWR 33

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 14/42 (33%), Positives = 18/42 (42%), Gaps = 1/42 (2%)

Query: 287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK-HTGAKPYVC 327
                   +PY+C +C  A+  N SL  H    HTG KP   
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 53.4 bits (129), Expect = 1e-09
 Identities = 14/51 (27%), Positives = 21/51 (41%), Gaps = 2/51 (3%)

Query: 2  HQGIKQYQCSQ--CPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQ 50
          H     Y+C    C K F+    LK H ++H G      + CS    T++ 
Sbjct: 26 HTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTL 76

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 52.2 bits (126), Expect = 4e-09
 Identities = 19/81 (23%), Positives = 27/81 (33%), Gaps = 3/81 (3%)

Query: 153 TCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNR 212
             E C K F      K H   H  + P  C  E C + F     +++H +  H       
Sbjct: 5   HFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKV-HAG--YPC 61

Query: 213 FPCDKCEKVYSCASSLTKHMK 233
              D C  V    +   KH+ 
Sbjct: 62  KKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.9 bits (125), Expect = 4e-09
 Identities = 20/82 (24%), Positives = 29/82 (35%), Gaps = 4/82 (4%)

Query: 268 IFKCT--KCDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGAK 323
           ++ C    C K F+    L  HQ  H    PY+CP   C   +     L  H   H G  
Sbjct: 1   MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYP 60

Query: 324 PYVCEICNKVLTHRSSLISHYR 345
               + C+ V    +  + H  
Sbjct: 61  CKKDDSCSFVGKTWTLYLKHVA 82

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 17/50 (34%), Positives = 26/50 (52%), Gaps = 4/50 (8%)

Query: 8  YQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCN--ICSRKFTTYSQVRR 53
          Y C    C KAF +   LK H   HT + P+ C    C ++F+  S+++R
Sbjct: 2  YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKR 51

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 49.5 bits (119), Expect = 3e-08
 Identities = 21/79 (26%), Positives = 29/79 (36%), Gaps = 9/79 (11%)

Query: 129 SKSSHKIYLGHKLHLKRHTGEKPHTC--ELCSKGFLSAESYKCHLRRHKGEKPVTCTFEN 186
            K +       K+H   HT + P+ C  E C K F      K H + H G        ++
Sbjct: 14  KKHNQL-----KVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD--DS 66

Query: 187 CTETFVESWAMRKHVRTCH 205
           C+          KHV  CH
Sbjct: 67  CSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 39.5 bits (93), Expect = 9e-05
 Identities = 20/80 (25%), Positives = 30/80 (37%), Gaps = 4/80 (5%)

Query: 242 SCDICHKEFTHPSSVLYHKQSIHNNE-IFKCT--KCDKVFQHIQLLNRHQLVHMDTRPYQ 298
             + C K F   + +  H Q  H  +  ++C    CDK F     L RH+ VH      +
Sbjct: 5   HFENCGKAFKKHNQLKVH-QFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKK 63

Query: 299 CPQCPMAYKTNISLSAHLMK 318
              C    KT      H+ +
Sbjct: 64  DDSCSFVGKTWTLYLKHVAE 83

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 53.1 bits (128), Expect = 1e-09
 Identities = 19/46 (41%), Positives = 25/46 (54%), Gaps = 2/46 (4%)

Query: 2  HQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKF 45
             ++ Y C    C + F++   L  H RIHTG+KPF C IC R F
Sbjct: 14 VPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNF 59

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 46.1 bits (110), Expect = 4e-07
 Identities = 19/77 (24%), Positives = 30/77 (38%), Gaps = 11/77 (14%)

Query: 129 SKSSHKIYLGHKLHLKRHTGEKPHTC--ELCSKGFLSAESYKCHLRRHKGEKPVTCTFEN 186
              ++       L        +P+ C  E C + F  ++    H+R H G+KP  C    
Sbjct: 4   HPMNN-------LLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RI 54

Query: 187 CTETFVESWAMRKHVRT 203
           C   F  S  +  H+RT
Sbjct: 55  CMRNFSRSDHLTTHIRT 71

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 12/33 (36%), Positives = 20/33 (60%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRH 174
           H++ HTG+KP  C +C + F  ++    H+R H
Sbjct: 40  HIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH 72

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 41.5 bits (98), Expect = 1e-05
 Identities = 17/66 (25%), Positives = 29/66 (43%), Gaps = 5/66 (7%)

Query: 170 HLRRHK--GEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASS 227
           +L  +     +P  C  E+C   F  S  + +H+R  H       F C  C + +S +  
Sbjct: 8   NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRI-HTG--QKPFQCRICMRNFSRSDH 64

Query: 228 LTKHMK 233
           LT H++
Sbjct: 65  LTTHIR 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 40.8 bits (96), Expect = 3e-05
 Identities = 20/64 (31%), Positives = 30/64 (46%), Gaps = 4/64 (6%)

Query: 284 LNRHQLVHMDTRPYQCP--QCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLI 341
           L  + +     RPY CP   C   +  +  L+ H+  HTG KP+ C IC +  +    L 
Sbjct: 9   LLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLT 66

Query: 342 SHYR 345
           +H R
Sbjct: 67  THIR 70

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 39.6 bits (93), Expect = 7e-05
 Identities = 12/30 (40%), Positives = 17/30 (56%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHT 31
          H G K +QC  C + F++  +L  H R HT
Sbjct: 44 HTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 50.3 bits (121), Expect = 6e-09
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN 39
            G K + C +C K F     L+ H R+H GEK    +
Sbjct: 7  GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.9 bits (107), Expect = 5e-07
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                +GEK HTC+ C K F    + + H R H GEK    +
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 36.8 bits (86), Expect = 4e-04
 Identities = 9/31 (29%), Positives = 14/31 (45%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                +G K + C+ C K   + S+L  H R
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQR 33

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.5 bits (119), Expect = 1e-08
 Identities = 12/37 (32%), Positives = 19/37 (51%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
              K Y C++C KAF +  +L  H +IHT +   + 
Sbjct: 7  GTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 8/41 (19%), Positives = 12/41 (29%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                T  K + C  C K F        H + H  +   + 
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.8 bits (86), Expect = 3e-04
 Identities = 8/29 (27%), Positives = 11/29 (37%)

Query: 25 EHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
                T  K + CN C + FT    + R
Sbjct: 2  SSGSSGTDSKSYNCNECGKAFTRIFHLTR 30

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 49.2 bits (118), Expect = 1e-08
 Identities = 12/41 (29%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 1  WHQGIKQYQCSQ--CPKAFNQKGNLKEHFRIHTGEKPFTCN 39
             G K + C+   C   F++   L  H R H+G KP   +
Sbjct: 6  SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 47.7 bits (114), Expect = 5e-08
 Identities = 14/44 (31%), Positives = 17/44 (38%), Gaps = 2/44 (4%)

Query: 142 HLKRHTGEKPHTC--ELCSKGFLSAESYKCHLRRHKGEKPVTCT 183
                TGEKP  C    C   F  ++    H R H G KP   +
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 38.4 bits (90), Expect = 1e-04
 Identities = 11/34 (32%), Positives = 15/34 (44%)

Query: 170 HLRRHKGEKPVTCTFENCTETFVESWAMRKHVRT 203
                 GEKP  CT+  C   F  S  + +H R+
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRS 36

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 48.4 bits (115), Expect = 3e-08
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICS 42
           +  KQ  C  C K F    +L  H   H+GEKP++    S
Sbjct: 7  GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 40.7 bits (95), Expect = 2e-05
 Identities = 12/39 (30%), Positives = 14/39 (35%)

Query: 144 KRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
                 K   CE+C K F        H   H GEKP + 
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSS 43

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 37.6 bits (87), Expect = 2e-04
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC 302
             C  C K+F+ +  LNRH+L H   +PY     
Sbjct: 13  VACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 48.6 bits (115), Expect = 4e-08
 Identities = 14/51 (27%), Positives = 24/51 (47%)

Query: 7  QYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNT 57
          +Y C +C     +   LK+H R HT  +P+ C  C+  F T   + +   +
Sbjct: 1  KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKS 51

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 41.2 bits (96), Expect = 1e-05
 Identities = 16/55 (29%), Positives = 27/55 (49%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAK 323
           + C +C    +   +L +H   H D RPY C  C  ++KT  +L+ H+     +K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 15/49 (30%), Positives = 22/49 (44%)

Query: 297 YQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           Y C +C +  K    L  H+  HT  +PY C  CN     + +L  H +
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK 50

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.5 bits (94), Expect = 3e-05
 Identities = 11/33 (33%), Positives = 17/33 (51%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEK 34
          H  ++ Y C+ C  +F  KGNL +H +     K
Sbjct: 24 HTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.1 bits (93), Expect = 4e-05
 Identities = 10/39 (25%), Positives = 19/39 (48%)

Query: 140 KLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEK 178
           K H++ HT  +P+ C  C+  F +  +   H++     K
Sbjct: 18  KKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.5 bits (111), Expect = 1e-07
 Identities = 10/37 (27%), Positives = 19/37 (51%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
            G K Y C++C + F+    L +H ++HT +   + 
Sbjct: 5  SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.9 bits (86), Expect = 3e-04
 Identities = 9/37 (24%), Positives = 16/37 (43%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTC 182
            +GEKP++C  C + F        H + H  +   + 
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.5 bits (85), Expect = 4e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
            +G KPY C  C +  +  + L+ H +
Sbjct: 5   SSGEKPYSCAECKETFSDNNRLVQHQK 31

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 46.7 bits (110), Expect = 6e-07
 Identities = 18/94 (19%), Positives = 30/94 (31%), Gaps = 7/94 (7%)

Query: 212 RFPCDKCEKVYSCASSLTKHMK-----ARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNN 266
           +F C  C   Y     LT HM           +  + +          S+L  +      
Sbjct: 19  KFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQ 78

Query: 267 EIFKCTKCDKVFQHIQLLNRH--QLVHMDTRPYQ 298
           ++ KC  C   F+ +Q L+ H  +  H       
Sbjct: 79  KVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGP 112

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 45.5 bits (107), Expect = 2e-06
 Identities = 16/95 (16%), Positives = 28/95 (29%), Gaps = 2/95 (2%)

Query: 140 KLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRK 199
           KL+    TG     C+ CS  + +      H+    G         +       S   ++
Sbjct: 8   KLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNET-GHYRDDNHETDNNNPKRWSKPRKR 66

Query: 200 HVRTCHNKPTVNR-FPCDKCEKVYSCASSLTKHMK 233
            +     K    +   C  C   +     L+ HM 
Sbjct: 67  SLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMI 101

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 43.6 bits (102), Expect = 7e-06
 Identities = 16/103 (15%), Positives = 30/103 (29%), Gaps = 5/103 (4%)

Query: 223 SCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIH-----NNEIFKCTKCDKV 277
           S  SS   +     G     C  C   +     +  H          N+E          
Sbjct: 2   SSGSSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWS 61

Query: 278 FQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHT 320
               + L   +      +  +C  C  ++++   LS H++K  
Sbjct: 62  KPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTK 104

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 40.9 bits (95), Expect = 6e-05
 Identities = 9/58 (15%), Positives = 16/58 (27%), Gaps = 1/58 (1%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSA 59
            G  +++C  C  A++    L  H    TG      +             R  +   
Sbjct: 14 FTGASKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKRWSKPRKRSLLE 70

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 37.8 bits (87), Expect = 8e-04
 Identities = 16/95 (16%), Positives = 23/95 (24%), Gaps = 5/95 (5%)

Query: 254 SSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLV--HMDTRPYQCPQCPMAYKT--- 308
           SS   +         F+C  C   +  +  L  H     H     ++         +   
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPR 64

Query: 309 NISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH 343
             SL     K    K   C  C         L  H
Sbjct: 65  KRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVH 99

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.5 bits (105), Expect = 7e-07
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKP 35
            G   ++CS+C + F Q+  L +H R H  +  
Sbjct: 7  GAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.0 bits (106), Expect = 2e-06
 Identities = 12/29 (41%), Positives = 15/29 (51%)

Query: 10 CSQCPKAFNQKGNLKEHFRIHTGEKPFTC 38
          C +  K+F  K  L  H R+HTGEK    
Sbjct: 65 CPREGKSFKAKYKLVNHIRVHTGEKSGPS 93

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.8 bits (90), Expect = 3e-04
 Identities = 9/65 (13%), Positives = 21/65 (32%), Gaps = 7/65 (10%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRR----HKGEKPVTCTFENCT---ETFVESWAMR 198
              +     + C + F +      H+         +    C +E C    ++F   + + 
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLV 79

Query: 199 KHVRT 203
            H+R 
Sbjct: 80  NHIRV 84

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 38.4 bits (89), Expect = 3e-04
 Identities = 15/68 (22%), Positives = 23/68 (33%), Gaps = 9/68 (13%)

Query: 269 FKCTKCDKVFQHIQLLNRH-QLVHMDTRPYQ--------CPQCPMAYKTNISLSAHLMKH 319
                CD+ F  +  L  H  + H+              CP+   ++K    L  H+  H
Sbjct: 26  RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVH 85

Query: 320 TGAKPYVC 327
           TG K    
Sbjct: 86  TGEKSGPS 93

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 44.2 bits (103), Expect = 7e-06
 Identities = 19/89 (21%), Positives = 29/89 (32%), Gaps = 2/89 (2%)

Query: 257 LYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHL 316
           L  +Q      I K    +             L       + CP C M + +++SL  H+
Sbjct: 35  LTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHI 94

Query: 317 MKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                    VC +C K  T   S + H  
Sbjct: 95  RYTE--HTKVCPVCKKEFTSTDSALDHVC 121

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 43.0 bits (100), Expect = 1e-05
 Identities = 21/90 (23%), Positives = 29/90 (32%), Gaps = 2/90 (2%)

Query: 230 KHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQL 289
              + RL R  V   I + +    SS LY   +      F C  C   F     L +H  
Sbjct: 36  TPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIR 95

Query: 290 VHMDTRPYQCPQCPMAYKTNISLSAHLMKH 319
                    CP C   + +  S   H+ K 
Sbjct: 96  YT--EHTKVCPVCKKEFTSTDSALDHVCKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.4 bits (88), Expect = 6e-04
 Identities = 18/68 (26%), Positives = 24/68 (35%), Gaps = 4/68 (5%)

Query: 139 HKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMR 198
           +   L          C LC   F S+ S K H+R    E    C    C + F  + +  
Sbjct: 62  YLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPV--CKKEFTSTDSAL 117

Query: 199 KHVRTCHN 206
            HV   HN
Sbjct: 118 DHVCKKHN 125

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.4 bits (88), Expect = 6e-04
 Identities = 14/52 (26%), Positives = 23/52 (44%), Gaps = 2/52 (3%)

Query: 2   HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
            + I Q+ C  C   F+   +LK+H R    E    C +C ++FT+      
Sbjct: 69  SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALD 118

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.0 bits (87), Expect = 8e-04
 Identities = 28/128 (21%), Positives = 45/128 (35%), Gaps = 11/128 (8%)

Query: 138 GHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAM 197
           G K +L  H G       +  +            +R    + +  T  +  +   ES  +
Sbjct: 9   GSKKYLSNHKGIF---IHVTLEELKRYHQLTPEQKRL--IRAIVKTLIHNPQLLDESSYL 63

Query: 198 RKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVL 257
            + + +         F C  C   +S + SL +H+  R       C +C KEFT   S L
Sbjct: 64  YRLLASKAISQ----FVCPLCLMPFSSSVSLKQHI--RYTEHTKVCPVCKKEFTSTDSAL 117

Query: 258 YHKQSIHN 265
            H    HN
Sbjct: 118 DHVCKKHN 125

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 40.4 bits (94), Expect = 4e-05
 Identities = 16/73 (21%), Positives = 23/73 (31%), Gaps = 7/73 (9%)

Query: 225 ASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLL 284
           + S  K  K  LG +   C  C   F   S++   K          C KC K       L
Sbjct: 3   SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRRKTP-------MCEKCRKDSCQEAAL 55

Query: 285 NRHQLVHMDTRPY 297
           N+ +      +  
Sbjct: 56  NKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.3 bits (91), Expect = 1e-04
 Identities = 8/36 (22%), Positives = 13/36 (36%)

Query: 1  WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPF 36
               K   C +C K   Q+  L +     +G+K  
Sbjct: 33 TLSRRKTPMCEKCRKDSCQEAALNKDEGNESGKKTS 68

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.9 bits (90), Expect = 1e-04
 Identities = 13/62 (20%), Positives = 24/62 (38%), Gaps = 7/62 (11%)

Query: 284 LNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH 343
             + Q +H+  R  +C +C + +    +LS         K  +CE C K     ++L   
Sbjct: 6   SGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAALNKD 58

Query: 344 YR 345
             
Sbjct: 59  EG 60

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 38.5 bits (89), Expect = 2e-04
 Identities = 16/73 (21%), Positives = 26/73 (35%), Gaps = 8/73 (10%)

Query: 254 SSVLYHKQSIHNNE-IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISL 312
           S     +Q IH  +   KC+KC  +F     L+R        +   C +C        +L
Sbjct: 3   SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-------KTPMCEKCRKDSCQEAAL 55

Query: 313 SAHLMKHTGAKPY 325
           +      +G K  
Sbjct: 56  NKDEGNESGKKTS 68

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 41.4 bits (96), Expect = 4e-05
 Identities = 16/94 (17%), Positives = 36/94 (38%), Gaps = 3/94 (3%)

Query: 225 ASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLL 284
            SS +        ++   C +C+ + +       H++   N     C  C   F   +L 
Sbjct: 1   GSSGSSGASPVENKEVYQCRLCNAKLSSLLEQGSHERLCRNA--AVCPYCSLRFFSPELK 58

Query: 285 NRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK 318
             H+    + +   C +C   +K++ S+  H ++
Sbjct: 59  QEHE-SKCEYKKLTCLECMRTFKSSFSIWRHQVE 91

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 107

 Score = 40.7 bits (94), Expect = 6e-05
 Identities = 18/77 (23%), Positives = 26/77 (33%), Gaps = 3/77 (3%)

Query: 212 RFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKC 271
            + C  C    S       H   RL R    C  C   F  P  +    +S    +   C
Sbjct: 16  VYQCRLCNAKLSSLLEQGSHE--RLCRNAAVCPYCSLRFFSPE-LKQEHESKCEYKKLTC 72

Query: 272 TKCDKVFQHIQLLNRHQ 288
            +C + F+    + RHQ
Sbjct: 73  LECMRTFKSSFSIWRHQ 89

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 38.1 bits (89), Expect = 1e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRH 174
             +  TG KP  C  C + F  ++    H +RH
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 37.7 bits (88), Expect = 2e-04
 Identities = 10/21 (47%), Positives = 11/21 (52%)

Query: 26 HFRIHTGEKPFTCNICSRKFT 46
            R  TG KPF C  C R F+
Sbjct: 2  STRGSTGIKPFQCPDCDRSFS 22

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens} Length = 30

 Score = 36.7 bits (84), Expect = 3e-04
 Identities = 15/30 (50%), Positives = 18/30 (60%)

Query: 5  IKQYQCSQCPKAFNQKGNLKEHFRIHTGEK 34
          +K Y C  C + F   G L+ H RIHTGEK
Sbjct: 1  MKPYVCIHCQRQFADPGALQRHVRIHTGEK 30

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	345
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.98
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.95
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.92
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.9
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.89
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.89
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.87
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.83
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.82
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.81
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.81
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.8
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.79
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.78
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.78
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.77
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.77
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.76
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.75
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.73
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.73
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.71
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.7
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.69
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.69
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.67
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.66
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.66
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.64
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.64
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.63
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.62
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.62
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.62
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.61
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.59
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.59
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.56
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.56
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.55
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.54
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.54
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.53
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.53
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.52
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.52
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.51
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.51
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.51
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.51
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.51
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.5
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.49
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.49
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.48
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.47
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.47
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.46
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.45
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.42
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.41
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.4
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.37
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.37
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.36
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.36
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.36
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.35
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.35
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.35
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.35
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.34
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.34
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.34
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.34
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.34
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.33
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.33
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.33
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.33
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.33
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.32
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.31
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.31
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.3
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.29
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.29
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.29
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.28
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.27
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.27
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.27
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.27
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.26
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.26
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.26
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.26
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.26
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.25
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.25
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.25
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.25
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.25
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.24
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.23
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.23
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.22
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.21
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.2
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.2
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.2
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.2
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.2
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.2
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.19
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.19
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.19
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.18
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.17
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.17
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.16
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.16
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.15
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.15
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.15
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.14
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.14
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.13
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.12
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.11
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.1
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.1
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.1
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.1
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.1
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.07
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.05
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.05
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.05
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.04
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.03
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.03
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.03
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.03
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.02
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.02
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.01
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.0
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.96
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.92
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.88
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.86
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.83
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.82
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.8
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.8
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.79
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.78
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.76
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.73
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.69
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.68
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.66
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.65
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.63
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.62
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.61
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.6
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.6
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.59
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.56
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.55
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.49
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.45
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.45
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.41
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.39
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.39
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.36
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.36
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.34
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.33
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.33
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.32
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.31
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.31
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.3
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.3
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.29
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.29
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.28
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.28
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.27
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.26
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.25
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.25
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.25
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.56
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.24
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.23
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.22
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.22
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.21
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.21
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.2
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.2
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.5
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.19
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.47
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.46
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.16
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.34
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.06
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.33
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.9
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.87
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.8
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.72
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	97.27
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.94
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.91
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.89
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.81
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.64
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	96.47
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.43
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.94
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	92.42
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	92.33
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	91.63
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	90.6
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	90.17
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	89.93
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	89.57
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	87.62
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	86.77
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	86.17
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	85.59
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	84.83
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	84.03
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	83.76
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	83.65
4rxn_A	54	Rubredoxin; electron transfer(iron-sulfur protein)	81.05
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	80.98
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	80.58
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	80.56
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	80.35
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	80.24

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=4e-38  Score=251.16  Aligned_cols=183  Identities=30%  Similarity=0.647  Sum_probs=141.8

Q ss_pred             cccceeccccCCCcccccccccccCCHHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCCCCCCccccCC
Q psy8793         138 GHKLHLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDK  217 (345)
Q Consensus       138 ~~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~  217 (345)
                      .+..|+..+.++++|.|+.|++.|.+...|..|++.|.++++|.|.  .|+..|.+...|..|+..|++.   .+|.|+.
T Consensus         8 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~   82 (190)
T 2i13_A            8 SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCP--ECGKSFSDKKDLTRHQRTHTGE---KPYKCPE   82 (190)
T ss_dssp             -----------------------CCSSHHHHHGGGCC---CCEECT--TTCCEESSHHHHHHHHHHHHCC---CCEECTT
T ss_pred             cchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCC--CcCchhCCHHHHHHHHHhcCCC---CCccCcc
Confidence            4556777888889999999999999999999999999999999997  6999999999999999998876   7799999


Q ss_pred             CcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCc
Q psy8793         218 CEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPY  297 (345)
Q Consensus       218 C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  297 (345)
                      |++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+..|+++++|.|++|++.|.+.+.|..|+++|+++++|
T Consensus        83 C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~  162 (190)
T 2i13_A           83 CGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPY  162 (190)
T ss_dssp             TCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCE
T ss_pred             cCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCe
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCccccCChHHHHHHhhhhcCCCcc
Q psy8793         298 QCPQCPMAYKTNISLSAHLMKHTGAKPY  325 (345)
Q Consensus       298 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~  325 (345)
                      .|++|++.|.....|..|+++|+|++||
T Consensus       163 ~C~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          163 KCPECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             ECTTTCCEESSHHHHHHHHTTC------
T ss_pred             ECCCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            9999999999999999999999999886

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=2.1e-37  Score=247.00  Aligned_cols=177  Identities=31%  Similarity=0.668  Sum_probs=146.7

Q ss_pred             HHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCCCCCCccccCCCcccccChhhHHHHHHHhcCCCCccC
Q psy8793         164 AESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSC  243 (345)
Q Consensus       164 ~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C  243 (345)
                      ...|..|+..+.++++|.|.  .|+..|.+...|..|+..+.+.   .+|.|+.|++.|.+...|..|++.|.++++|.|
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   80 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACP--ECGKSFSRSDHLAEHQRTHTGE---KPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKC   80 (190)
T ss_dssp             ---------------------------CCSSHHHHHGGGCC------CCEECTTTCCEESSHHHHHHHHHHHHCCCCEEC
T ss_pred             hccchhhhhhcCCCCCCcCC--CCccccCCHHHHHHHHHHcCCC---CCccCCCcCchhCCHHHHHHHHHhcCCCCCccC
Confidence            35688899999999999998  7999999999999999998876   789999999999999999999999999999999


Q ss_pred             ccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         244 DICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       244 ~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      +.|++.|.+...|..|+..|+++++|.|+.|++.|.+.+.|..|+++|+++++|.|++|++.|.....|..|+++|++++
T Consensus        81 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~  160 (190)
T 2i13_A           81 PECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEK  160 (190)
T ss_dssp             TTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCC
T ss_pred             cccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccccccchhhccccchhhhccC
Q psy8793         324 PYVCEICNKVLTHRSSLISHYR  345 (345)
Q Consensus       324 ~~~C~~C~~~f~~~~~l~~H~r  345 (345)
                      ||.|++|++.|.+..+|..|++
T Consensus       161 ~~~C~~C~~~f~~~~~L~~H~~  182 (190)
T 2i13_A          161 PYKCPECGKSFSRRDALNVHQR  182 (190)
T ss_dssp             CEECTTTCCEESSHHHHHHHHT
T ss_pred             CeECCCCCCccCCHHHHHHHHH
Confidence            9999999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.98  E-value=4.3e-32  Score=216.20  Aligned_cols=168  Identities=26%  Similarity=0.515  Sum_probs=98.7

Q ss_pred             CCCcccc--cccccccCCHHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCCCCCCccccC--CCccccc
Q psy8793         148 GEKPHTC--ELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCD--KCEKVYS  223 (345)
Q Consensus       148 ~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~--~C~~~f~  223 (345)
                      ..++|.|  +.|++.|.+...|..|++.|.++++|.|.++.|+..|.+...|..|+..|.+.   ++|.|+  .|++.|.
T Consensus         9 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~---~~~~C~~~~C~~~f~   85 (190)
T 1tf6_A            9 VYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGE---KNFTCDSDGCDLRFT   85 (190)
T ss_dssp             -CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTC---CCEECCSSSCCCEES
T ss_pred             CCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCC---CceeCCCCCCCCccC
Confidence            4567888  57888888888888888887777776663335666666666666666555554   455565  5666666


Q ss_pred             ChhhHHHHHH-Hh-cCCCCccC--ccccccCCChhHHHHHhhhhcCCceeecCc--CccccCChHHHHHHHHHhCCCCCc
Q psy8793         224 CASSLTKHMK-AR-LGRQPVSC--DICHKEFTHPSSVLYHKQSIHNNEIFKCTK--CDKVFQHIQLLNRHQLVHMDTRPY  297 (345)
Q Consensus       224 ~~~~l~~H~~-~~-~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~  297 (345)
                      +...|..|++ .| .+..+|.|  +.|++.|.+...|..|++.|+++++|.|+.  |++.|.+.+.|..|+++|++   |
T Consensus        86 ~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~  162 (190)
T 1tf6_A           86 TKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---Y  162 (190)
T ss_dssp             CHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---C
T ss_pred             CHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---C
Confidence            6666666653 23 13445555  555555555555555555555555555544  55555555555555555554   4


Q ss_pred             CCCC---CccccCChHHHHHHhhhhcC
Q psy8793         298 QCPQ---CPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       298 ~C~~---C~~~f~~~~~l~~H~~~h~~  321 (345)
                      .|+.   |++.|.....|..|+++|++
T Consensus       163 ~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          163 PCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             CCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             cCCCCCcCCCccccHHHHHHHHHhhcC
Confidence            5555   55555555555555555544

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=1.5e-31  Score=213.14  Aligned_cols=165  Identities=27%  Similarity=0.622  Sum_probs=153.9

Q ss_pred             cCCCCccccccccCccccchHhHHHHhhhhcCCCCCCcccc--CCCcccccChhhHHHHHHHhcCCCCccCc--cccccC
Q psy8793         175 KGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPC--DKCEKVYSCASSLTKHMKARLGRQPVSCD--ICHKEF  250 (345)
Q Consensus       175 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f  250 (345)
                      ...++|.|.++.|+..|.+...|..|+..|.+.   ++|.|  +.|++.|.+...|..|+++|.++++|.|.  .|++.|
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~---~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   84 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGE---KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRF   84 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCC---CSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEE
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCC---CCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCcc
Confidence            346789997778999999999999999999887   78999  88999999999999999999999999999  899999


Q ss_pred             CChhHHHHHhhhhc--CCceeec--CcCccccCChHHHHHHHHHhCCCCCcCCCC--CccccCChHHHHHHhhhhcCCCc
Q psy8793         251 THPSSVLYHKQSIH--NNEIFKC--TKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGAKP  324 (345)
Q Consensus       251 ~~~~~l~~H~~~~~--~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~  324 (345)
                      .+...|..|+...|  ++++|.|  +.|++.|.+.+.|..|+++|+++++|.|+.  |++.|...+.|..|+++|++   
T Consensus        85 ~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---  161 (190)
T 1tf6_A           85 TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---  161 (190)
T ss_dssp             SCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---
T ss_pred             CCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---
Confidence            99999999994444  5789999  889999999999999999999999999988  99999999999999999998   


Q ss_pred             ccccc---chhhccccchhhhccC
Q psy8793         325 YVCEI---CNKVLTHRSSLISHYR  345 (345)
Q Consensus       325 ~~C~~---C~~~f~~~~~l~~H~r  345 (345)
                      |.|..   |++.|.+...|..|++
T Consensus       162 ~~C~~~~~C~~~f~~~~~l~~H~~  185 (190)
T 1tf6_A          162 YPCKKDDSCSFVGKTWTLYLKHVA  185 (190)
T ss_dssp             CCCCSTTTCCCCCSCHHHHHHHHT
T ss_pred             CcCCCCCcCCCccccHHHHHHHHH
Confidence            99999   9999999999999986

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=1.2e-27  Score=184.05  Aligned_cols=107  Identities=25%  Similarity=0.568  Sum_probs=61.1

Q ss_pred             cCCCcccccChhhHHHHHHHhcCCCCccCcc--ccccCCChhHHHHHhhhhcCCceeecCc--CccccCChHHHHHHH-H
Q psy8793         215 CDKCEKVYSCASSLTKHMKARLGRQPVSCDI--CHKEFTHPSSVLYHKQSIHNNEIFKCTK--CDKVFQHIQLLNRHQ-L  289 (345)
Q Consensus       215 C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~  289 (345)
                      |..|++.|.+...|..|++.|.++++|.|++  |++.|.+...|..|++.|+++++|.|++  |++.|.+.+.|..|+ +
T Consensus        42 C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~  121 (155)
T 2gli_A           42 CSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNR  121 (155)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHH
T ss_pred             ccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHH
Confidence            4444555555555555555555555555553  5555555555555555555555555555  555555555555555 4


Q ss_pred             HhCCCCCcCCCC--CccccCChHHHHHHhhhhcC
Q psy8793         290 VHMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       290 ~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  321 (345)
                      +|.++++|.|++  |++.|...+.|..|+++|+|
T Consensus       122 ~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A          122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             TTCSCCCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             hcCCCCCeeCCCCCCccccCCHHHHHHHHHhhcC
Confidence            555555555555  55555555555555555543

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.95  E-value=3.7e-28  Score=186.96  Aligned_cols=135  Identities=26%  Similarity=0.532  Sum_probs=124.8

Q ss_pred             CccccCCCcccccChhhHHHHHH---HhcCCCCccCcc-----ccccCCChhHHHHHhhhhcCCceeecCc--CccccCC
Q psy8793         211 NRFPCDKCEKVYSCASSLTKHMK---ARLGRQPVSCDI-----CHKEFTHPSSVLYHKQSIHNNEIFKCTK--CDKVFQH  280 (345)
Q Consensus       211 ~~~~C~~C~~~f~~~~~l~~H~~---~~~~~~~~~C~~-----C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~  280 (345)
                      .+|.|+.|++.|.+...|..|++   +|.++++|.|.+     |++.|.+...|..|++.|+++++|.|++  |++.|.+
T Consensus         2 ~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~   81 (155)
T 2gli_A            2 TDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSR   81 (155)
T ss_dssp             CBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSS
T ss_pred             CcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccC
Confidence            45889999999999999999988   566778888775     3499999999999999999999999986  9999999


Q ss_pred             hHHHHHHHHHhCCCCCcCCCC--CccccCChHHHHHHh-hhhcCCCcccccc--chhhccccchhhhccC
Q psy8793         281 IQLLNRHQLVHMDTRPYQCPQ--CPMAYKTNISLSAHL-MKHTGAKPYVCEI--CNKVLTHRSSLISHYR  345 (345)
Q Consensus       281 ~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~~l~~H~r  345 (345)
                      ...|..|+++|+++++|.|++  |++.|.+.+.|..|+ ++|+++++|.|++  |++.|.+..+|..|++
T Consensus        82 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~~L~~H~~  151 (155)
T 2gli_A           82 LENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK  151 (155)
T ss_dssp             HHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHHHHHHHHH
T ss_pred             HHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHHHHHHHHH
Confidence            999999999999999999998  999999999999998 7999999999998  9999999999999985

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=2.6e-25  Score=163.04  Aligned_cols=108  Identities=28%  Similarity=0.674  Sum_probs=69.6

Q ss_pred             CCCCccCcc--ccccCCChhHHHHHhhhhcCCceeecC--cCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHH
Q psy8793         237 GRQPVSCDI--CHKEFTHPSSVLYHKQSIHNNEIFKCT--KCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISL  312 (345)
Q Consensus       237 ~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  312 (345)
                      ++++|.|..  |++.|.+...|..|+..|+++++|.|+  .|++.|.+.+.|..|+++|+++++|.|++|++.|.....|
T Consensus         3 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   82 (119)
T 2jp9_A            3 EKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHL   82 (119)
T ss_dssp             SSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             CCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHH
Confidence            345566654  666666666666666666666666666  4666666666666666666666666666666666666666


Q ss_pred             HHHhhhhcCCCcccc--ccchhhccccchhhhcc
Q psy8793         313 SAHLMKHTGAKPYVC--EICNKVLTHRSSLISHY  344 (345)
Q Consensus       313 ~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~  344 (345)
                      ..|+++|+++++|.|  +.|++.|.+..+|..|+
T Consensus        83 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~  116 (119)
T 2jp9_A           83 KTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHH  116 (119)
T ss_dssp             HHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHH
T ss_pred             HHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHH
Confidence            666666666666666  56666666666666665

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=2.8e-25  Score=164.13  Aligned_cols=113  Identities=24%  Similarity=0.594  Sum_probs=102.4

Q ss_pred             CCccccCCCcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhh---hcCCceeecCcCccccCChHHHHH
Q psy8793         210 VNRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQS---IHNNEIFKCTKCDKVFQHIQLLNR  286 (345)
Q Consensus       210 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~---~~~~~~~~C~~C~~~f~~~~~l~~  286 (345)
                      ..+|.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.+...|..|+..   +.++++|.|++|++.|.+...|..
T Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~   84 (124)
T 2dlq_A            5 SSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRL   84 (124)
T ss_dssp             CSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHHH
T ss_pred             CCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHHH
Confidence            46799999999999999999999999999999999999999999999999985   467889999999999999999999


Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhh-hhcCC
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLM-KHTGA  322 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  322 (345)
                      |+++|+++++|.|++|++.|.....|..|++ .|.++
T Consensus        85 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~  121 (124)
T 2dlq_A           85 HMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGP  121 (124)
T ss_dssp             HHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCS
T ss_pred             HHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCC
Confidence            9999999999999999999999999999987 56654

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=1.1e-24  Score=167.32  Aligned_cols=118  Identities=21%  Similarity=0.432  Sum_probs=110.9

Q ss_pred             CccccCCCcccccChhhHHHHHHH-hcCCCC--------ccCccccccCCChhHHHHHhhhhcCCceeecCc--CccccC
Q psy8793         211 NRFPCDKCEKVYSCASSLTKHMKA-RLGRQP--------VSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTK--CDKVFQ  279 (345)
Q Consensus       211 ~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~  279 (345)
                      ..|.|..|++.|.+...|..|++. |.+..+        |.|..|++.|.+...|..|++.|+++++|.|++  |++.|.
T Consensus        24 ~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~  103 (155)
T 2rpc_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFA  103 (155)
T ss_dssp             CSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCEES
T ss_pred             cccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCccC
Confidence            569999999999999999999998 555443        899999999999999999999999999999998  999999


Q ss_pred             ChHHHHHHHHHhCCCCCcCCCC--CccccCChHHHHHHhhhhcCCCccccc
Q psy8793         280 HIQLLNRHQLVHMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       280 ~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      ....|..|+++|+++++|.|++  |++.|.....|..|+++|++++||.|.
T Consensus       104 ~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A          104 RSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             CHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            9999999999999999999997  999999999999999999999999995

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.91  E-value=3.1e-24  Score=158.48  Aligned_cols=109  Identities=27%  Similarity=0.617  Sum_probs=101.8

Q ss_pred             CCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHH---hCCCCCcCCCCCccccCChHHHH
Q psy8793         237 GRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLV---HMDTRPYQCPQCPMAYKTNISLS  313 (345)
Q Consensus       237 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~---h~~~~~~~C~~C~~~f~~~~~l~  313 (345)
                      ++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|.+...|..|++.   |.++++|.|++|++.|.....|.
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~   83 (124)
T 2dlq_A            4 GSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELR   83 (124)
T ss_dssp             CCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCCEECSSSCCEESSHHHHH
T ss_pred             CCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCCeECCCCCCccCCHHHHH
Confidence            567899999999999999999999999999999999999999999999999985   57889999999999999999999


Q ss_pred             HHhhhhcCCCccccccchhhccccchhhhccC
Q psy8793         314 AHLMKHTGAKPYVCEICNKVLTHRSSLISHYR  345 (345)
Q Consensus       314 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~r  345 (345)
                      .|+++|++++||.|++|++.|.+..+|..||+
T Consensus        84 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  115 (124)
T 2dlq_A           84 LHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI  115 (124)
T ss_dssp             HHHHHHSSSCSEECSSSCCEESSHHHHHHHHH
T ss_pred             HHHHHcCCCCCccCCCccchhCCHHHHHHHHH
Confidence            99999999999999999999999999999974

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=2.1e-25  Score=165.24  Aligned_cols=107  Identities=21%  Similarity=0.404  Sum_probs=83.2

Q ss_pred             HHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHH
Q psy8793         233 KARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISL  312 (345)
Q Consensus       233 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  312 (345)
                      .++.|+++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.+.+.|..|+++|++++||.|++|++.|...+.|
T Consensus        15 ~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L   94 (133)
T 2lt7_A           15 LIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFM   94 (133)
T ss_dssp             EEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHH
T ss_pred             eecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHH
Confidence            45566777778788877777778888877777778888888888888888888888888888888888888888888888


Q ss_pred             HHHhhhhcCCC------ccccccchhhccccch
Q psy8793         313 SAHLMKHTGAK------PYVCEICNKVLTHRSS  339 (345)
Q Consensus       313 ~~H~~~h~~~~------~~~C~~C~~~f~~~~~  339 (345)
                      ..|+++|++++      +|+|..|++.|.....
T Consensus        95 ~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~~~  127 (133)
T 2lt7_A           95 SSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQYA  127 (133)
T ss_dssp             HHHHHHHTCCCTTSSSCCEEECCCCSSCCCCCH
T ss_pred             HHHhHHhcCCCCCCCCCCeecCCCCchhhhccc
Confidence            88888777654      4888888887766543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.91  E-value=1.3e-24  Score=160.38  Aligned_cols=114  Identities=29%  Similarity=0.594  Sum_probs=102.5

Q ss_pred             CccccC--CCcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCc--CccccCChHHHHH
Q psy8793         211 NRFPCD--KCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTK--CDKVFQHIQLLNR  286 (345)
Q Consensus       211 ~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~  286 (345)
                      ++|.|+  .|++.|.+...|..|+++| +.++|.|..|++.|.+...|..|+..|+++++|.|++  |++.|.+.+.|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~   82 (124)
T 1ubd_C            4 RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT   82 (124)
T ss_dssp             -CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHHH
T ss_pred             CcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHHH
Confidence            579999  8999999999999999988 8889999999999999999999999999999999986  9999999999999


Q ss_pred             HHHHhCCCCCcCCC--CCccccCChHHHHHHhhhhcCCCcc
Q psy8793         287 HQLVHMDTRPYQCP--QCPMAYKTNISLSAHLMKHTGAKPY  325 (345)
Q Consensus       287 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  325 (345)
                      |+++|+++++|.|+  .|++.|.+.+.|..|+++|++++++
T Consensus        83 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           83 HVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             HHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             HHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            99999999999996  5999999999999999999998876

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.90  E-value=4.7e-24  Score=156.24  Aligned_cols=109  Identities=27%  Similarity=0.611  Sum_probs=104.9

Q ss_pred             CccccCC--CcccccChhhHHHHHHHhcCCCCccCc--cccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHH
Q psy8793         211 NRFPCDK--CEKVYSCASSLTKHMKARLGRQPVSCD--ICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNR  286 (345)
Q Consensus       211 ~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~  286 (345)
                      ++|.|+.  |++.|.+...|..|++.|.++++|.|+  .|++.|.+...|..|+..|+++++|.|+.|++.|.+.+.|..
T Consensus         5 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   84 (119)
T 2jp9_A            5 RPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKT   84 (119)
T ss_dssp             CCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHH
T ss_pred             eeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCCCccCCccCchhCCHHHHHH
Confidence            6799987  999999999999999999999999999  799999999999999999999999999999999999999999


Q ss_pred             HHHHhCCCCCcCC--CCCccccCChHHHHHHhhhh
Q psy8793         287 HQLVHMDTRPYQC--PQCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       287 H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  319 (345)
                      |+++|+++++|.|  +.|++.|.+.+.|..|+++|
T Consensus        85 H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           85 HTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             HHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             HHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            9999999999999  89999999999999999876

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.89  E-value=5.6e-24  Score=157.02  Aligned_cols=107  Identities=34%  Similarity=0.691  Sum_probs=100.9

Q ss_pred             CCCccCc--cccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC--CccccCChHHHH
Q psy8793         238 RQPVSCD--ICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMAYKTNISLS  313 (345)
Q Consensus       238 ~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~  313 (345)
                      .++|.|+  .|++.|.+...|..|+..| ++++|.|+.|++.|.+...|..|+++|+++++|.|+.  |++.|.....|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~   81 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR   81 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEECCSTTCCCEESCHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCeeCCCCCCcCccCCHHHHH
Confidence            4679999  8999999999999999988 8899999999999999999999999999999999986  999999999999


Q ss_pred             HHhhhhcCCCccccc--cchhhccccchhhhccC
Q psy8793         314 AHLMKHTGAKPYVCE--ICNKVLTHRSSLISHYR  345 (345)
Q Consensus       314 ~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~r  345 (345)
                      .|+++|+++++|.|+  .|++.|.+..+|..|++
T Consensus        82 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~  115 (124)
T 1ubd_C           82 THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHIL  115 (124)
T ss_dssp             HHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHH
T ss_pred             HHHHHhCCCCceECCCCCCCCccCCHHHHHHHHH
Confidence            999999999999996  59999999999999974

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.89  E-value=5.4e-24  Score=157.62  Aligned_cols=98  Identities=20%  Similarity=0.419  Sum_probs=92.7

Q ss_pred             CccccCCCcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHH
Q psy8793         211 NRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       211 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      ++|.|++|++.|.+...|..|+++|.++++|.|+.|++.|.+...|..|+..|.+++||.|++|++.|...+.|..|+++
T Consensus        21 k~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~  100 (133)
T 2lt7_A           21 VYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLACGKSFINYQFMSSHIKS  100 (133)
T ss_dssp             EEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEEESSSCCEESSHHHHHHHHHH
T ss_pred             cCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccccCCCccccCCCCCCCcCCHHHHHHHhHH
Confidence            78999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCC------CcCCCCCccccCC
Q psy8793         291 HMDTR------PYQCPQCPMAYKT  308 (345)
Q Consensus       291 h~~~~------~~~C~~C~~~f~~  308 (345)
                      |++++      +|.|..|++.|..
T Consensus       101 hh~~~p~~~~k~~~C~~C~k~~~~  124 (133)
T 2lt7_A          101 VHSQDPSGDSKLYRLHPCRSLQIR  124 (133)
T ss_dssp             HTCCCTTSSSCCEEECCCCSSCCC
T ss_pred             hcCCCCCCCCCCeecCCCCchhhh
Confidence            88754      5889999998864

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.87  E-value=1e-22  Score=156.32  Aligned_cols=109  Identities=25%  Similarity=0.500  Sum_probs=102.0

Q ss_pred             CCCCccCccccccCCChhHHHHHhhhhc-CCce--------eecCcCccccCChHHHHHHHHHhCCCCCcCCCC--Cccc
Q psy8793         237 GRQPVSCDICHKEFTHPSSVLYHKQSIH-NNEI--------FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMA  305 (345)
Q Consensus       237 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~-~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~  305 (345)
                      ....|.|..|++.|.+...|..|+..+| +..+        |.|+.|++.|.+...|..|+++|+++++|.|..  |++.
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~  101 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKI  101 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEECSCTTTCCE
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccCCcCCCCCc
Confidence            4678999999999999999999999844 4433        899999999999999999999999999999998  9999


Q ss_pred             cCChHHHHHHhhhhcCCCcccccc--chhhccccchhhhccC
Q psy8793         306 YKTNISLSAHLMKHTGAKPYVCEI--CNKVLTHRSSLISHYR  345 (345)
Q Consensus       306 f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~r  345 (345)
                      |.....|..|+++|+++++|.|.+  |++.|.+..+|..|++
T Consensus       102 f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~  143 (155)
T 2rpc_A          102 FARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMH  143 (155)
T ss_dssp             ESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSST
T ss_pred             cCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHH
Confidence            999999999999999999999997  9999999999999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.83  E-value=1.5e-20  Score=134.47  Aligned_cols=91  Identities=21%  Similarity=0.573  Sum_probs=77.3

Q ss_pred             CCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHh
Q psy8793         237 GRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHL  316 (345)
Q Consensus       237 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  316 (345)
                      ++++|.|..|++.|.+...|..|++.|+++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|.....|..|+
T Consensus        14 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~   93 (106)
T 2ee8_A           14 TKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHK   93 (106)
T ss_dssp             CCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHH
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHH
Confidence            45677888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             hhhcCCCcccc
Q psy8793         317 MKHTGAKPYVC  327 (345)
Q Consensus       317 ~~h~~~~~~~C  327 (345)
                      ++|+++++|.+
T Consensus        94 ~~H~~~~~~~~  104 (106)
T 2ee8_A           94 TLHMQTSSPTA  104 (106)
T ss_dssp             HHTTSCCCCCC
T ss_pred             HHhCCCCCCcC
Confidence            88888888765

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.82  E-value=2.9e-20  Score=130.41  Aligned_cols=91  Identities=30%  Similarity=0.595  Sum_probs=81.8

Q ss_pred             cCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHH
Q psy8793         236 LGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAH  315 (345)
Q Consensus       236 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  315 (345)
                      .++++|.|.+|++.|.+...|..|++.|+++++|.|+.|++.|.....|..|+++|+++++|.|++|++.|.....|..|
T Consensus         4 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   83 (96)
T 2dmd_A            4 GSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH   83 (96)
T ss_dssp             CCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHHH
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHH
Confidence            35678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hhhhcCCCccc
Q psy8793         316 LMKHTGAKPYV  326 (345)
Q Consensus       316 ~~~h~~~~~~~  326 (345)
                      +++|+++++..
T Consensus        84 ~~~h~~~~~p~   94 (96)
T 2dmd_A           84 LRSHTGDSGPS   94 (96)
T ss_dssp             HTTCCSCCCCC
T ss_pred             HHHhcCCCCCC
Confidence            99999887544

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.81  E-value=2.6e-20  Score=128.92  Aligned_cols=86  Identities=22%  Similarity=0.497  Sum_probs=66.8

Q ss_pred             CCCccCc--cccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHH
Q psy8793         238 RQPVSCD--ICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAH  315 (345)
Q Consensus       238 ~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  315 (345)
                      +++|.|+  .|++.|.+...|..|++.|+++++|.|+.|++.|.+.+.|..|+++|+++++|.|++|++.|...+.|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            4567776  47777777777777777777777888888888888888888888888888888888888888888888888


Q ss_pred             hhhhcCCC
Q psy8793         316 LMKHTGAK  323 (345)
Q Consensus       316 ~~~h~~~~  323 (345)
                      +++|++++
T Consensus        82 ~~~H~~~k   89 (90)
T 1a1h_A           82 TKIHLRQK   89 (90)
T ss_dssp             HGGGGC--
T ss_pred             HHHhcccC
Confidence            88887765

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.81  E-value=1.3e-20  Score=128.05  Aligned_cols=82  Identities=28%  Similarity=0.612  Sum_probs=51.3

Q ss_pred             CccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhh
Q psy8793         240 PVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       240 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  319 (345)
                      +|.|..|++.|.+...|..|+..|+++++|.|+.|++.|.+...|..|++.|+++++|.|+.|++.|...+.|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            35566666666666666666666666666666666666666666666666666666666666666666666666666665


Q ss_pred             cC
Q psy8793         320 TG  321 (345)
Q Consensus       320 ~~  321 (345)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            53

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=1.7e-20  Score=131.55  Aligned_cols=83  Identities=31%  Similarity=0.620  Sum_probs=80.0

Q ss_pred             hcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhhh
Q psy8793         263 IHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLIS  342 (345)
Q Consensus       263 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  342 (345)
                      ..++++|.|++|++.|.+...|..|++.|.++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|.+..+|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            35678999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccC
Q psy8793         343 HYR  345 (345)
Q Consensus       343 H~r  345 (345)
                      |++
T Consensus        83 H~~   85 (96)
T 2dmd_A           83 HLR   85 (96)
T ss_dssp             HHT
T ss_pred             HHH
Confidence            986

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.81  E-value=1.9e-21  Score=141.33  Aligned_cols=91  Identities=19%  Similarity=0.246  Sum_probs=60.4

Q ss_pred             hHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHH--hCCCCCcC-CCCCcccc--CChHHHHHHhhhhcCCCccccc
Q psy8793         254 SSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLV--HMDTRPYQ-CPQCPMAY--KTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       254 ~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--h~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      ..|..|++.|+++++|.|++|++.|.+.+.|..|+++  |.+.+++. |++|++.|  .....|..|+++|++++||.|.
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~   84 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCM   84 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCS
T ss_pred             hhhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECC
Confidence            4455666666666667777777777666667777666  55555443 66776666  6666666666666666667777


Q ss_pred             cchhhccccchhhhcc
Q psy8793         329 ICNKVLTHRSSLISHY  344 (345)
Q Consensus       329 ~C~~~f~~~~~l~~H~  344 (345)
                      +|++.|.+..+|..|+
T Consensus        85 ~C~k~f~~~~~L~~H~  100 (115)
T 2dmi_A           85 YCGHSFESLQDLSVHM  100 (115)
T ss_dssp             SSCCBCSSHHHHHHHH
T ss_pred             CCCCccCCHHHHHHHH
Confidence            7777777766666665

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=4.3e-20  Score=125.47  Aligned_cols=78  Identities=38%  Similarity=0.820  Sum_probs=58.2

Q ss_pred             eeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhhhccC
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR  345 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~r  345 (345)
                      ||.|+.|++.|.+...|..|++.|.++++|.|+.|++.|.....|..|+++|+++++|.|+.|++.|.+..+|..|++
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   78 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSR   78 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHH
Confidence            467777777777777777777777777777777777777777777777777777777777777777777777777763

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=3.1e-20  Score=128.61  Aligned_cols=81  Identities=28%  Similarity=0.701  Sum_probs=76.9

Q ss_pred             CCceeecC--cCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhhh
Q psy8793         265 NNEIFKCT--KCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLIS  342 (345)
Q Consensus       265 ~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  342 (345)
                      ++++|.|+  .|++.|.+.+.|..|+++|.++++|.|+.|++.|.....|..|+++|+++++|.|+.|++.|.+..+|..
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   80 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKR   80 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHH
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHH
Confidence            36789998  5999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ccC
Q psy8793         343 HYR  345 (345)
Q Consensus       343 H~r  345 (345)
                      |++
T Consensus        81 H~~   83 (90)
T 1a1h_A           81 HTK   83 (90)
T ss_dssp             HHG
T ss_pred             HHH
Confidence            985

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=4.1e-20  Score=129.34  Aligned_cols=86  Identities=27%  Similarity=0.560  Sum_probs=68.2

Q ss_pred             CCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCC--CCcCCCCCccccCChHHHHH
Q psy8793         237 GRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDT--RPYQCPQCPMAYKTNISLSA  314 (345)
Q Consensus       237 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~  314 (345)
                      ++++|.|.+|++.|.+...|..|++.|+++++|.|+.|++.|.....|..|+++|+++  ++|.|++|++.|.....|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            4667888888888888888888888888888888888888888888888888888776  77888888888888888888


Q ss_pred             Hhh-hhcCC
Q psy8793         315 HLM-KHTGA  322 (345)
Q Consensus       315 H~~-~h~~~  322 (345)
                      |++ .|.++
T Consensus        84 H~~~~H~~~   92 (95)
T 2yt9_A           84 HIKQVHSGP   92 (95)
T ss_dssp             HHHHTSCCC
T ss_pred             HHHHhcCCC
Confidence            875 66654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=3.7e-20  Score=133.31  Aligned_cols=84  Identities=27%  Similarity=0.471  Sum_probs=43.2

Q ss_pred             cCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHH
Q psy8793         236 LGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAH  315 (345)
Q Consensus       236 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  315 (345)
                      .++++|.| .|++.|.+...|..|++.|+++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.....|..|
T Consensus         6 ~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   84 (110)
T 2csh_A            6 SGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH   84 (110)
T ss_dssp             CCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHHHH
Confidence            34445555 45555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             hhhhc
Q psy8793         316 LMKHT  320 (345)
Q Consensus       316 ~~~h~  320 (345)
                      ++.|+
T Consensus        85 ~~~~~   89 (110)
T 2csh_A           85 VTSCT   89 (110)
T ss_dssp             HHHHH
T ss_pred             HHHcc
Confidence            55443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=2.7e-20  Score=133.23  Aligned_cols=93  Identities=15%  Similarity=0.308  Sum_probs=74.3

Q ss_pred             HHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHH
Q psy8793         233 KARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISL  312 (345)
Q Consensus       233 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  312 (345)
                      +.|.++++|.|.+|++.|.+...|..|++.|  .++|.|++|++.|.....|..|++ |+++++|.|.+|++.|.....|
T Consensus         9 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L   85 (107)
T 1wjp_A            9 SPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSI   85 (107)
T ss_dssp             CCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHH
T ss_pred             cccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHH
Confidence            3456677788888888888888888887776  367888888888888888888885 8888888888888888888888


Q ss_pred             HHHhh-hhcCCCccccc
Q psy8793         313 SAHLM-KHTGAKPYVCE  328 (345)
Q Consensus       313 ~~H~~-~h~~~~~~~C~  328 (345)
                      ..|++ .|+++++|.|.
T Consensus        86 ~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           86 WRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             HHHHHHTSCCCCCCCCC
T ss_pred             HHHHHHHcCCCCCCCCC
Confidence            88886 88888888774

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=5.1e-19  Score=126.40  Aligned_cols=89  Identities=28%  Similarity=0.580  Sum_probs=86.3

Q ss_pred             CccccCCCcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHH
Q psy8793         211 NRFPCDKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       211 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      .+|.|+.|++.|.+...|..|++.|.++++|.|.+|++.|.+...|..|+..|+++++|.|++|++.|.....|..|+++
T Consensus        16 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~   95 (106)
T 2ee8_A           16 KEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTL   95 (106)
T ss_dssp             CCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHHHHHHH
T ss_pred             cCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHHHHHHH
Confidence            67999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hCCCCCcCC
Q psy8793         291 HMDTRPYQC  299 (345)
Q Consensus       291 h~~~~~~~C  299 (345)
                      |+++++|.+
T Consensus        96 H~~~~~~~~  104 (106)
T 2ee8_A           96 HMQTSSPTA  104 (106)
T ss_dssp             TTSCCCCCC
T ss_pred             hCCCCCCcC
Confidence            999998865

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=6.1e-19  Score=123.32  Aligned_cols=80  Identities=35%  Similarity=0.795  Sum_probs=56.7

Q ss_pred             CCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCC--Cccccccchhhccccchhhh
Q psy8793         265 NNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGA--KPYVCEICNKVLTHRSSLIS  342 (345)
Q Consensus       265 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~~  342 (345)
                      ++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.....|..|++.|+++  ++|.|.+|++.|.+..+|..
T Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~~   83 (95)
T 2yt9_A            4 GSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNG   83 (95)
T ss_dssp             CCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHHH
T ss_pred             CCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHHH
Confidence            4566777777777777777777777777777777777777777777777777777665  66777777777777777777


Q ss_pred             cc
Q psy8793         343 HY  344 (345)
Q Consensus       343 H~  344 (345)
                      ||
T Consensus        84 H~   85 (95)
T 2yt9_A           84 HI   85 (95)
T ss_dssp             HH
T ss_pred             HH
Confidence            65

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.78  E-value=2.4e-19  Score=112.12  Aligned_cols=58  Identities=28%  Similarity=0.642  Sum_probs=54.7

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      ++||.|++||+.|...+.|..|+++|++++||.|++||++|...+.|..|+++|+|++
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999999999999999999999999874

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.77  E-value=7.7e-21  Score=138.07  Aligned_cols=99  Identities=12%  Similarity=0.145  Sum_probs=55.8

Q ss_pred             HHHHHHHhcCCCCccCccccccCCChhHHHHHhhh--hcCCceee-cCcCcccc--CChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         228 LTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQS--IHNNEIFK-CTKCDKVF--QHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       228 l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~--~~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      |..|+++|.++++|.|..|++.|.+...|..|++.  +.+.+++. |++|++.|  .....|..|+++|++++||.|++|
T Consensus         7 l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C   86 (115)
T 2dmi_A            7 GKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYC   86 (115)
T ss_dssp             CCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSS
T ss_pred             hhhheeeeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCC
Confidence            44444455555555555555555555555555554  43344333 66666655  555666666666666666666666


Q ss_pred             ccccCChHHHHHHhhhhcCCCccc
Q psy8793         303 PMAYKTNISLSAHLMKHTGAKPYV  326 (345)
Q Consensus       303 ~~~f~~~~~l~~H~~~h~~~~~~~  326 (345)
                      ++.|...+.|..|+++|+......
T Consensus        87 ~k~f~~~~~L~~H~~~hh~~~~~~  110 (115)
T 2dmi_A           87 GHSFESLQDLSVHMIKTKHYQKVS  110 (115)
T ss_dssp             CCBCSSHHHHHHHHHHTTTTTCSC
T ss_pred             CCccCCHHHHHHHHHHhCCcccCC
Confidence            666666666666666655544433

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.77  E-value=1.2e-19  Score=129.93  Aligned_cols=84  Identities=17%  Similarity=0.373  Sum_probs=79.0

Q ss_pred             HhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccc
Q psy8793         259 HKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRS  338 (345)
Q Consensus       259 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  338 (345)
                      +++.+.++++|.|++|++.|.....|..|+++|  .++|.|++|++.|.....|..|+. |++++||.|.+|++.|.+..
T Consensus         7 ~~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~   83 (107)
T 1wjp_A            7 GASPVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSF   83 (107)
T ss_dssp             CCCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHH
T ss_pred             cCcccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHH
Confidence            456778899999999999999999999999999  479999999999999999999995 99999999999999999999


Q ss_pred             hhhhccC
Q psy8793         339 SLISHYR  345 (345)
Q Consensus       339 ~l~~H~r  345 (345)
                      +|..|++
T Consensus        84 ~L~~H~~   90 (107)
T 1wjp_A           84 SIWRHQV   90 (107)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            9999984

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.76  E-value=6.8e-20  Score=126.14  Aligned_cols=79  Identities=18%  Similarity=0.335  Sum_probs=70.7

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhhhccC
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR  345 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~r  345 (345)
                      ++||.|+.|++.|...+.|..|+++|+++++|.|+.|++.|.....|..|+++|++ .+|.|..|++.|.+..+|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            46899999999999999999999999999999999999999999999999998885 78999999999999999999874

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.75  E-value=6e-19  Score=121.75  Aligned_cols=79  Identities=27%  Similarity=0.671  Sum_probs=49.5

Q ss_pred             ceeecCc--CccccCChHHHHHHHHHhCCCCCcCCC--CCccccCChHHHHHHhhhhcCCCccccccchhhccccchhhh
Q psy8793         267 EIFKCTK--CDKVFQHIQLLNRHQLVHMDTRPYQCP--QCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLIS  342 (345)
Q Consensus       267 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  342 (345)
                      .+|.|+.  |++.|.+...|..|++.|.++++|.|+  .|++.|.....|..|+++|+++++|.|+.|++.|.+..+|..
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   83 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLAL   83 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHHH
Confidence            4466666  666666666666666666666666664  466666666666666666666666666666666666666666


Q ss_pred             ccC
Q psy8793         343 HYR  345 (345)
Q Consensus       343 H~r  345 (345)
                      |++
T Consensus        84 H~~   86 (89)
T 2wbs_A           84 HMK   86 (89)
T ss_dssp             HGG
T ss_pred             HHH
Confidence            653

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=9.7e-19  Score=125.79  Aligned_cols=83  Identities=35%  Similarity=0.744  Sum_probs=68.1

Q ss_pred             hhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhh
Q psy8793         262 SIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLI  341 (345)
Q Consensus       262 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  341 (345)
                      .|.++++|.| .|++.|.+...|..|++.|.++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|.+..+|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            3567778888 788888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             hccC
Q psy8793         342 SHYR  345 (345)
Q Consensus       342 ~H~r  345 (345)
                      .||+
T Consensus        83 ~H~~   86 (110)
T 2csh_A           83 RHVT   86 (110)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            8874

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=2.2e-18  Score=121.63  Aligned_cols=83  Identities=30%  Similarity=0.602  Sum_probs=53.3

Q ss_pred             CCCccCcc--ccccCCChhHHHHHhhhhcCCceeecC--cCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHH
Q psy8793         238 RQPVSCDI--CHKEFTHPSSVLYHKQSIHNNEIFKCT--KCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLS  313 (345)
Q Consensus       238 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  313 (345)
                      .++|.|..  |++.|.+...|..|++.|+++++|.|+  .|++.|.....|..|+++|+++++|.|++|++.|.....|.
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   92 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA   92 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHHH
Confidence            34566664  666666666666666666666666664  36666666666666666666666666666666666666666


Q ss_pred             HHhhhhc
Q psy8793         314 AHLMKHT  320 (345)
Q Consensus       314 ~H~~~h~  320 (345)
                      .|+++|+
T Consensus        93 ~H~~~H~   99 (100)
T 2ebt_A           93 LHMKRHQ   99 (100)
T ss_dssp             HHHHHHC
T ss_pred             HHHHHhC
Confidence            6666664

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=9.3e-18  Score=118.44  Aligned_cols=81  Identities=32%  Similarity=0.720  Sum_probs=63.8

Q ss_pred             CCceeecCc--CccccCChHHHHHHHHHhCCCCCcCCC--CCccccCChHHHHHHhhhhcCCCccccccchhhccccchh
Q psy8793         265 NNEIFKCTK--CDKVFQHIQLLNRHQLVHMDTRPYQCP--QCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSL  340 (345)
Q Consensus       265 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  340 (345)
                      ..++|.|.+  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|+++|+++++|.|.+|++.|.+..+|
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l   91 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHL   91 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHHHH
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHHHH
Confidence            345678876  888888888888888888888888885  5888888888888888888888888888888888888888


Q ss_pred             hhccC
Q psy8793         341 ISHYR  345 (345)
Q Consensus       341 ~~H~r  345 (345)
                      ..||+
T Consensus        92 ~~H~~   96 (100)
T 2ebt_A           92 ALHMK   96 (100)
T ss_dssp             HHHHH
T ss_pred             HHHHH
Confidence            87764

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.73  E-value=6.1e-18  Score=116.64  Aligned_cols=83  Identities=28%  Similarity=0.584  Sum_probs=73.3

Q ss_pred             CCCccCcc--ccccCCChhHHHHHhhhhcCCceeecC--cCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHH
Q psy8793         238 RQPVSCDI--CHKEFTHPSSVLYHKQSIHNNEIFKCT--KCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLS  313 (345)
Q Consensus       238 ~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  313 (345)
                      ..+|.|..  |++.|.+...|..|+..|+++++|.|+  .|++.|.+...|..|+++|+++++|.|++|++.|...+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            45688888  888888888888888888888899997  59999999999999999999999999999999999999999


Q ss_pred             HHhhhhc
Q psy8793         314 AHLMKHT  320 (345)
Q Consensus       314 ~H~~~h~  320 (345)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9998873

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=7.7e-18  Score=113.27  Aligned_cols=71  Identities=24%  Similarity=0.647  Sum_probs=65.7

Q ss_pred             cCCceeecCc--CccccCChHHHHHHHH-HhCCCCCcCCCC--CccccCChHHHHHHhhhhcCCCccccccchhhc
Q psy8793         264 HNNEIFKCTK--CDKVFQHIQLLNRHQL-VHMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGAKPYVCEICNKVL  334 (345)
Q Consensus       264 ~~~~~~~C~~--C~~~f~~~~~l~~H~~-~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  334 (345)
                      .++++|.|..  |++.|.+.+.|..|++ .|.++++|.|++  |++.|.....|..|+++|++++||.|.+|+++|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4677899987  9999999999999999 699999999998  999999999999999999999999999999988

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.70  E-value=1e-17  Score=114.71  Aligned_cols=80  Identities=20%  Similarity=0.353  Sum_probs=72.3

Q ss_pred             HHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCC----CCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         255 SVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDT----RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       255 ~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      .+..|++.|.++++|.|++|++.|.....|..|++.|++.    ++|.|.+|++.|.....|..|+++|++++++.|..|
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~   81 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENS   81 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCC
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCC
Confidence            3567888999999999999999999999999999887665    789999999999999999999999999999999999


Q ss_pred             hhhc
Q psy8793         331 NKVL  334 (345)
Q Consensus       331 ~~~f  334 (345)
                      +.+|
T Consensus        82 ~~~~   85 (86)
T 1x6h_A           82 GPSS   85 (86)
T ss_dssp             CCCC
T ss_pred             CCCC
Confidence            8865

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.69  E-value=1.1e-17  Score=114.29  Aligned_cols=74  Identities=30%  Similarity=0.674  Sum_probs=48.7

Q ss_pred             eeec--CcCccccCChHHHHHHHHHhCCCCCcCCCC--CccccCChHHHHHHhhhhcCCCcccccc---chhhccccchh
Q psy8793         268 IFKC--TKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGAKPYVCEI---CNKVLTHRSSL  340 (345)
Q Consensus       268 ~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  340 (345)
                      ||.|  +.|++.|.+.+.|..|+++|.++++|.|+.  |++.|.....|..|+++|++   |.|..   |++.|.+..+|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            4566  666666666666666666666666666655  66666666666666666665   66666   66666666666


Q ss_pred             hhcc
Q psy8793         341 ISHY  344 (345)
Q Consensus       341 ~~H~  344 (345)
                      ..|+
T Consensus        78 ~~H~   81 (85)
T 2j7j_A           78 LKHV   81 (85)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            6665

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.69  E-value=6.2e-18  Score=105.63  Aligned_cols=57  Identities=26%  Similarity=0.569  Sum_probs=54.7

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhcccccccccc
Q psy8793           5 IKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN   61 (345)
Q Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   61 (345)
                      ||||+|.+|+++|.....|..|+++|++++||.|++|++.|.....|..|+++|.+.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htge   58 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNK   58 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCC
Confidence            899999999999999999999999999999999999999999999999999987653

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=4.4e-17  Score=108.89  Aligned_cols=66  Identities=30%  Similarity=0.628  Sum_probs=61.6

Q ss_pred             hhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccc
Q psy8793         262 SIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC  327 (345)
Q Consensus       262 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  327 (345)
                      .+.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|++++||.|
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            455788999999999999999999999999999999999999999999999999999999999988

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.66  E-value=4.1e-18  Score=117.13  Aligned_cols=81  Identities=19%  Similarity=0.396  Sum_probs=53.9

Q ss_pred             CCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhh
Q psy8793         239 QPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMK  318 (345)
Q Consensus       239 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  318 (345)
                      ++|.|..|++.|.+...|..|++.|+++++|.|+.|++.|...+.|..|++.|++ .+|.|+.|++.|.....|..|++.
T Consensus         2 k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~~   80 (88)
T 1llm_C            2 KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVAR   80 (88)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHHH
Confidence            4566666666666666666666666666666777777777766777777666664 566677777777777777777664


Q ss_pred             hc
Q psy8793         319 HT  320 (345)
Q Consensus       319 h~  320 (345)
                      ++
T Consensus        81 ~h   82 (88)
T 1llm_C           81 LK   82 (88)
T ss_dssp             HH
T ss_pred             HH
Confidence            43

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.66  E-value=1.1e-16  Score=109.23  Aligned_cols=78  Identities=28%  Similarity=0.517  Sum_probs=60.9

Q ss_pred             CccC--ccccccCCChhHHHHHhhhhcCCceeecCc--CccccCChHHHHHHHHHhCCCCCcCCCC---CccccCChHHH
Q psy8793         240 PVSC--DICHKEFTHPSSVLYHKQSIHNNEIFKCTK--CDKVFQHIQLLNRHQLVHMDTRPYQCPQ---CPMAYKTNISL  312 (345)
Q Consensus       240 ~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  312 (345)
                      +|.|  +.|++.|.+...|..|++.|+++++|.|+.  |++.|.+.+.|..|+++|++   |.|+.   |++.|...+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            4667  777777777777777777777777788877  88888888888888888777   77877   88888888888


Q ss_pred             HHHhhhhc
Q psy8793         313 SAHLMKHT  320 (345)
Q Consensus       313 ~~H~~~h~  320 (345)
                      ..|+++|+
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            88877664

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=8.7e-17  Score=112.18  Aligned_cols=70  Identities=20%  Similarity=0.383  Sum_probs=63.9

Q ss_pred             hcCCceeecCcCccccCChHHHHHHHH-Hh---CCCCCcCCCCCccccCChHHHHHH-hhhhcCCCccccccchh
Q psy8793         263 IHNNEIFKCTKCDKVFQHIQLLNRHQL-VH---MDTRPYQCPQCPMAYKTNISLSAH-LMKHTGAKPYVCEICNK  332 (345)
Q Consensus       263 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~  332 (345)
                      ..+++||.|+.|++.|...+.|..|++ .|   .+++||.|.+||+.|...+.|..| +++|+|++||.|.++..
T Consensus        13 ~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           13 KKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             CCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            357899999999999999999999998 58   568999999999999999999999 89999999999988654

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=4.4e-16  Score=108.14  Aligned_cols=79  Identities=15%  Similarity=0.243  Sum_probs=69.8

Q ss_pred             ccCCChhHHHHHhhhhcCCceeecCcCcccc-CChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHH-hhhhcCCCcc
Q psy8793         248 KEFTHPSSVLYHKQSIHNNEIFKCTKCDKVF-QHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAH-LMKHTGAKPY  325 (345)
Q Consensus       248 ~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~  325 (345)
                      ..|.....|..|...+.++++|.|+.|++.| .+.+.|..|+++| ++++|.|.+|++.|...+.|..| +++|+++..|
T Consensus        14 ~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPSG   92 (96)
T ss_dssp             CSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSSC
T ss_pred             CCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCCC
Confidence            4567778888999999999999999999999 8999999999999 99999999999999999999999 8889876555


Q ss_pred             cc
Q psy8793         326 VC  327 (345)
Q Consensus       326 ~C  327 (345)
                      .+
T Consensus        93 ~~   94 (96)
T 2ctd_A           93 PS   94 (96)
T ss_dssp             SC
T ss_pred             CC
Confidence            44

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.63  E-value=3.4e-16  Score=103.61  Aligned_cols=64  Identities=31%  Similarity=0.721  Sum_probs=57.9

Q ss_pred             hhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcc
Q psy8793         262 SIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPY  325 (345)
Q Consensus       262 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  325 (345)
                      .+.++++|.|+.|++.|...+.|..|+++|+++++|.|.+|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4456788999999999999999999999999999999999999999999999999999999886

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.62  E-value=6.8e-17  Score=119.61  Aligned_cols=69  Identities=19%  Similarity=0.271  Sum_probs=61.1

Q ss_pred             CChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         251 THPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       251 ~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      .....|..|+ .|++++||.|++|++.|...+.|..|+++|  ++||.|++|++.|...+.|..|+++|+|+
T Consensus        58 ~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           58 DESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             TTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             CCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence            4556666666 688899999999999999999999999998  88999999999999999999999999886

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=5.8e-16  Score=103.98  Aligned_cols=70  Identities=29%  Similarity=0.571  Sum_probs=62.2

Q ss_pred             CCCCccCcc--ccccCCChhHHHHHhh-hhcCCceeecCc--CccccCChHHHHHHHHHhCCCCCcCCCCCcccc
Q psy8793         237 GRQPVSCDI--CHKEFTHPSSVLYHKQ-SIHNNEIFKCTK--CDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAY  306 (345)
Q Consensus       237 ~~~~~~C~~--C~~~f~~~~~l~~H~~-~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  306 (345)
                      ++++|.|..  |++.|.+...|..|++ .|.++++|.|++  |++.|...+.|..|+++|+++++|.|++|++.|
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            456788876  8999988899999988 688889999998  999999999999999999999999999999988

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.62  E-value=1.1e-16  Score=112.13  Aligned_cols=80  Identities=23%  Similarity=0.363  Sum_probs=65.9

Q ss_pred             cCCChhHHHHHhhhhcCCceeecCcCccccC-ChHHHHHHHHHhCC-CCCcCCCCCccccCChHHHHHHhhhhcCCCccc
Q psy8793         249 EFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQ-HIQLLNRHQLVHMD-TRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYV  326 (345)
Q Consensus       249 ~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  326 (345)
                      .+.....+..|++.|.++++|.|++|++.|. ....|..|+++|++ +++|.|.+|++.|.....|..|+++|++++|+.
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            3455566778888888888888888888888 88888888888888 888888888888888888888888888888765


Q ss_pred             cc
Q psy8793         327 CE  328 (345)
Q Consensus       327 C~  328 (345)
                      -.
T Consensus        85 ~~   86 (98)
T 2gqj_A           85 AE   86 (98)
T ss_dssp             CC
T ss_pred             CC
Confidence            43

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=2.5e-16  Score=107.65  Aligned_cols=79  Identities=20%  Similarity=0.371  Sum_probs=70.1

Q ss_pred             HHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcCC----ceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCc
Q psy8793         228 LTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNN----EIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCP  303 (345)
Q Consensus       228 l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  303 (345)
                      +..|+++|.++++|.|..|++.|.....|..|+..++.+    ++|.|++|++.|.....|..|+++|++++++.|..|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~   82 (86)
T 1x6h_A            3 SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSG   82 (86)
T ss_dssp             TTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCC
T ss_pred             cccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCC
Confidence            456778888888899999999999999999998877765    7899999999999999999999999999999999999


Q ss_pred             ccc
Q psy8793         304 MAY  306 (345)
Q Consensus       304 ~~f  306 (345)
                      ..|
T Consensus        83 ~~~   85 (86)
T 1x6h_A           83 PSS   85 (86)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            765

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.2e-15  Score=99.71  Aligned_cols=64  Identities=25%  Similarity=0.439  Sum_probs=58.4

Q ss_pred             hcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccc
Q psy8793         263 IHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYV  326 (345)
Q Consensus       263 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  326 (345)
                      +.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|++++|..
T Consensus         4 ~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            4 GSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            5678899999999999999999999999999999999999999999999999999999988743

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.59  E-value=1.1e-15  Score=100.54  Aligned_cols=64  Identities=30%  Similarity=0.596  Sum_probs=58.4

Q ss_pred             hhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         260 KQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       260 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      .++|.++++|.|++|++.|.....|..|+++|.++++|.|++|++.|.....|..|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            4567888999999999999999999999999999999999999999999999999999998764

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.56  E-value=2.4e-15  Score=101.09  Aligned_cols=63  Identities=19%  Similarity=0.405  Sum_probs=55.7

Q ss_pred             hhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhh-hhcCCC
Q psy8793         261 QSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLM-KHTGAK  323 (345)
Q Consensus       261 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  323 (345)
                      ..+...++|.|++|++.|...+.|..|+++|++++||.|.+|+++|.....|.+|++ +|.+++
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCcCCC
Confidence            345567889999999999999999999999999999999999999999999999974 787764

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=4.9e-15  Score=98.80  Aligned_cols=65  Identities=29%  Similarity=0.568  Sum_probs=59.3

Q ss_pred             hcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCC
Q psy8793         235 RLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQC  299 (345)
Q Consensus       235 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  299 (345)
                      +.++++|.|.+|++.|.....|..|++.|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            34677899999999999999999999999999999999999999999999999999999999987

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.55  E-value=3.1e-15  Score=93.50  Aligned_cols=56  Identities=32%  Similarity=0.583  Sum_probs=42.7

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      +++|.|++|++.|.+.+.|..|+++|++++||.|++|++.|.....|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            56788888888888888888888888888888888888888888888888877763

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.54  E-value=2.4e-16  Score=116.61  Aligned_cols=77  Identities=21%  Similarity=0.424  Sum_probs=66.6

Q ss_pred             CceeecCcCccccC------ChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccch
Q psy8793         266 NEIFKCTKCDKVFQ------HIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSS  339 (345)
Q Consensus       266 ~~~~~C~~C~~~f~------~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  339 (345)
                      .+++.|++|++.|.      ..+.|..|+ .|++++||.|++|++.|...+.|..|+++|  ++||.|.+|++.|.+..+
T Consensus        39 ~~~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~  115 (129)
T 2wbt_A           39 QKRLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDS  115 (129)
T ss_dssp             HHHHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHH
T ss_pred             hCcccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHH
Confidence            44566666665554      667777777 688999999999999999999999999999  899999999999999999


Q ss_pred             hhhccC
Q psy8793         340 LISHYR  345 (345)
Q Consensus       340 l~~H~r  345 (345)
                      |..|++
T Consensus       116 l~~H~~  121 (129)
T 2wbt_A          116 ALDHVC  121 (129)
T ss_dssp             HHHHHH
T ss_pred             HHHHHH
Confidence            999984

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.54  E-value=6.5e-15  Score=91.97  Aligned_cols=56  Identities=29%  Similarity=0.670  Sum_probs=49.5

Q ss_pred             eeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      ||.|+.|++.|...+.|..|+++|+++++|.|++|++.|...+.|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57899999999999999999999998899999999999999999999998888765

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=6.9e-15  Score=94.88  Aligned_cols=61  Identities=23%  Similarity=0.577  Sum_probs=54.7

Q ss_pred             hhhcCCceeecCcCccccCChHHHHHHHHH-h-CCCCCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         261 QSIHNNEIFKCTKCDKVFQHIQLLNRHQLV-H-MDTRPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       261 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      ..|.++++|.|+.|++.|.+.+.|..|++. | .++++|.|+.|++.|...+.|..|++.|++
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            456788999999999999999999999988 7 588999999999999999999999998876

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=3.3e-15  Score=99.61  Aligned_cols=66  Identities=20%  Similarity=0.442  Sum_probs=58.1

Q ss_pred             HHHHhhhhcCCceeecCcCccccCChHHHHHHHH-HhCCC-CCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         256 VLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQL-VHMDT-RPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       256 l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      |.+|++.|.++++|.|++|++.|...+.|..|++ .|.+. ++|.|++|++.|.....|..|++.+++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            4468889999999999999999999999999997 57764 899999999999999999999997554

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=5.8e-15  Score=103.28  Aligned_cols=81  Identities=17%  Similarity=0.293  Sum_probs=73.0

Q ss_pred             cccChhhHHHHHHHhcCCCCccCccccccCC-ChhHHHHHhhhhcC-CceeecCcCccccCChHHHHHHHHHhCCCCCcC
Q psy8793         221 VYSCASSLTKHMKARLGRQPVSCDICHKEFT-HPSSVLYHKQSIHN-NEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQ  298 (345)
Q Consensus       221 ~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  298 (345)
                      .+.....+..|+++|.++++|.|.+|++.|. ....|..|++.|++ +++|.|.+|++.|...+.|..|+++|++++|..
T Consensus         5 s~~~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~   84 (98)
T 2gqj_A            5 SSGPGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSD   84 (98)
T ss_dssp             CCCCCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSC
T ss_pred             CCCCCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCC
Confidence            4555667788999999999999999999999 99999999999998 999999999999999999999999999998865


Q ss_pred             CCC
Q psy8793         299 CPQ  301 (345)
Q Consensus       299 C~~  301 (345)
                      -..
T Consensus        85 ~~~   87 (98)
T 2gqj_A           85 AEA   87 (98)
T ss_dssp             CCC
T ss_pred             CCC
Confidence            443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=2.7e-15  Score=98.60  Aligned_cols=61  Identities=36%  Similarity=0.716  Sum_probs=57.8

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhcccccccccc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN   61 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   61 (345)
                      +|+++++|+|++|++.|.....|..|+++|.++++|.|++|++.|.....|..|++.|+..
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~   68 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSG   68 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCC
Confidence            5899999999999999999999999999999999999999999999999999999987643

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=3.6e-15  Score=97.43  Aligned_cols=61  Identities=26%  Similarity=0.462  Sum_probs=58.1

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhcccccccccc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN   61 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   61 (345)
                      .|+++++|+|++|++.|.+...|..|+++|.++++|.|++|++.|.....|..|++.+++.
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~   63 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGD   63 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCC
Confidence            4789999999999999999999999999999999999999999999999999999998764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.51  E-value=3.2e-15  Score=93.44  Aligned_cols=57  Identities=32%  Similarity=0.616  Sum_probs=50.7

Q ss_pred             CCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhccccccccc
Q psy8793           4 GIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSAR   60 (345)
Q Consensus         4 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (345)
                      |+++|+|++|++.|.+...|..|+++|.+++||.|++|++.|.....|..|++.+|+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            689999999999999999999999999999999999999999999999999998763

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=2.7e-14  Score=99.09  Aligned_cols=80  Identities=19%  Similarity=0.314  Sum_probs=71.3

Q ss_pred             cccccChhhHHHHHHHhcCCCCccCccccccC-CChhHHHHHhhhhcCCceeecCcCccccCChHHHHHH-HHHhCCCCC
Q psy8793         219 EKVYSCASSLTKHMKARLGRQPVSCDICHKEF-THPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRH-QLVHMDTRP  296 (345)
Q Consensus       219 ~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~  296 (345)
                      ...|.....+..|.+.+.++++|.|..|++.| .+...|..|++.| ++++|.|.+|++.|...+.|..| +++|+++..
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~~p~   91 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNSLPS   91 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCCCSS
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCCCCC
Confidence            34667778899999999999999999999999 8999999999999 99999999999999999999999 889987655


Q ss_pred             cCC
Q psy8793         297 YQC  299 (345)
Q Consensus       297 ~~C  299 (345)
                      |.+
T Consensus        92 ~~~   94 (96)
T 2ctd_A           92 GPS   94 (96)
T ss_dssp             CSC
T ss_pred             CCC
Confidence            544

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=5.4e-17  Score=107.31  Aligned_cols=71  Identities=18%  Similarity=0.241  Sum_probs=65.6

Q ss_pred             hhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         253 PSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       253 ~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      ...|..|++.|.++++|.|++|++.|...+.|..       +++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            4567889999999999999999999998888776       7899999999999999999999999999999999988

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.51  E-value=2.8e-14  Score=94.27  Aligned_cols=63  Identities=24%  Similarity=0.562  Sum_probs=56.3

Q ss_pred             hcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCc
Q psy8793         235 RLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPY  297 (345)
Q Consensus       235 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  297 (345)
                      +.++++|.|..|++.|.+...|..|++.|+++++|.|++|++.|...+.|..|+++|++++||
T Consensus        12 ~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           12 THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             cCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            446778999999999999999999999999999999999999999999999999999998876

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.50  E-value=6.2e-15  Score=98.57  Aligned_cols=61  Identities=26%  Similarity=0.444  Sum_probs=57.1

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcC---CCCccCCcCCccccchhhhcccccccccc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTG---EKPFTCNICSRKFTTYSQVRRSSNTSARN   61 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   61 (345)
                      +|+++++|+|.+|++.|.....|..|+++|.+   +++|.|++|++.|.....|..|++.+|..
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~   64 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPA   64 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTT
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCC
Confidence            58999999999999999999999999999985   88999999999999999999999776654

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=9.7e-15  Score=101.78  Aligned_cols=68  Identities=15%  Similarity=0.269  Sum_probs=53.0

Q ss_pred             cCCCCccCccccccCCChhHHHHHhhh-h---cCCceeecCcCccccCChHHHHHH-HHHhCCCCCcCCCCCc
Q psy8793         236 LGRQPVSCDICHKEFTHPSSVLYHKQS-I---HNNEIFKCTKCDKVFQHIQLLNRH-QLVHMDTRPYQCPQCP  303 (345)
Q Consensus       236 ~~~~~~~C~~C~~~f~~~~~l~~H~~~-~---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~  303 (345)
                      .++++|.|..|++.|.....|..|++. |   .+++||.|.+|++.|...+.|..| +++|++++||.|.++.
T Consensus        14 ~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           14 KVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             CCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             CCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            356677777777777777777777763 5   456788888888888888888888 7888888888887755

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=1.2e-15  Score=101.75  Aligned_cols=62  Identities=26%  Similarity=0.586  Sum_probs=57.1

Q ss_pred             HHHHHHHhCCCCCcCCCCCccccCChHHHHHHhh-hhcCC-CccccccchhhccccchhhhccC
Q psy8793         284 LNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLM-KHTGA-KPYVCEICNKVLTHRSSLISHYR  345 (345)
Q Consensus       284 l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~r  345 (345)
                      |.+|+++|+++++|.|++|++.|.....|..|++ .|.++ ++|.|.+|++.|.+..+|..|++
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~   66 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLR   66 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHH
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHH
Confidence            4568899999999999999999999999999997 67764 89999999999999999999984

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.48  E-value=8.2e-15  Score=98.45  Aligned_cols=59  Identities=22%  Similarity=0.495  Sum_probs=55.0

Q ss_pred             CcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhccccccccc
Q psy8793           2 HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSAR   60 (345)
Q Consensus         2 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (345)
                      +.++++|.|++|++.|.++..|..|+++|++++||.|++|++.|.....|..|++..|.
T Consensus        23 ~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           23 SASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             CCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            45788999999999999999999999999999999999999999999999999976554

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=3.9e-15  Score=96.06  Aligned_cols=60  Identities=20%  Similarity=0.544  Sum_probs=56.2

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhh-h-cCCCCccCCcCCccccchhhhccccccccc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRI-H-TGEKPFTCNICSRKFTTYSQVRRSSNTSAR   60 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (345)
                      +|+++++|+|++|++.|.+...|..|+.+ | .++++|.|++|++.|.+...|..|++.+|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            4 TKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             EEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             ccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            47899999999999999999999999998 7 588999999999999999999999998775

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=4.4e-14  Score=89.14  Aligned_cols=56  Identities=30%  Similarity=0.625  Sum_probs=48.4

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHh-hhhcCC
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHL-MKHTGA  322 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  322 (345)
                      +||.|+.|++.|...+.|..|+++|+++++|.|++|++.|...+.|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            46889999999999999999999998889999999999999999999996 577764

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.46  E-value=4.1e-14  Score=94.51  Aligned_cols=65  Identities=20%  Similarity=0.297  Sum_probs=56.5

Q ss_pred             hcCCceeecCcCccccCChHHHHHHHHHhCC---CCCcCCCCCccccCChHHHHHHh-hhhcCCCcccc
Q psy8793         263 IHNNEIFKCTKCDKVFQHIQLLNRHQLVHMD---TRPYQCPQCPMAYKTNISLSAHL-MKHTGAKPYVC  327 (345)
Q Consensus       263 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~~~~~C  327 (345)
                      |.++++|.|.+|++.|...+.|..|+++|++   +++|.|.+|++.|.....|..|+ ..|.++++...
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~   70 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALLLAPQ   70 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTSSCCS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCCCCcc
Confidence            5678899999999999999999999999985   88999999999999999999998 46777776554

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.45  E-value=9.1e-14  Score=96.70  Aligned_cols=61  Identities=25%  Similarity=0.412  Sum_probs=56.0

Q ss_pred             eeecCcCccccCChHHHHHHHHH-hCCCCC--------cCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLV-HMDTRP--------YQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      .|.|+.|++.|.....|..|++. |.+.++        |.|++|++.|.....|..|+++|++++||.|.
T Consensus        25 ~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            46799999999999999999998 888877        99999999999999999999999999999996

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.42  E-value=7.6e-14  Score=88.02  Aligned_cols=50  Identities=38%  Similarity=0.785  Sum_probs=48.6

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhhhcc
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHY  344 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  344 (345)
                      +||.|+.|++.|...+.|..|+++|++++||.|+.|++.|.+...|..|+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~   50 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHA   50 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHH
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHH
Confidence            58999999999999999999999999999999999999999999999996

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=1.9e-13  Score=90.02  Aligned_cols=65  Identities=25%  Similarity=0.544  Sum_probs=50.7

Q ss_pred             HHHHhh-hhcCCceeecC--cCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhc
Q psy8793         256 VLYHKQ-SIHNNEIFKCT--KCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHT  320 (345)
Q Consensus       256 l~~H~~-~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  320 (345)
                      +..|.. .+.++++|.|+  .|++.|.....|..|+++|.++++|.|++|++.|...+.|..|+++|+
T Consensus         6 ~~~~~~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G            6 MNNLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             --CTTSCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccchhhccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            344443 44567788887  488888888888888888888888888888888888888888888774

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.40  E-value=3.6e-13  Score=83.92  Aligned_cols=56  Identities=20%  Similarity=0.408  Sum_probs=49.6

Q ss_pred             CccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCC
Q psy8793         240 PVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       240 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      +|.|..|++.|.+...|..|++.|+++++|.|+.|++.|...+.|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            57888899999989999999988888899999999999999999999999988765

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.37  E-value=1.2e-13  Score=81.94  Aligned_cols=45  Identities=24%  Similarity=0.406  Sum_probs=37.2

Q ss_pred             HHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       286 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      +|+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            366778888888888888888888888888888888888888877

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.37  E-value=1.1e-13  Score=82.09  Aligned_cols=44  Identities=27%  Similarity=0.447  Sum_probs=32.3

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777766

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=3.6e-13  Score=86.60  Aligned_cols=59  Identities=25%  Similarity=0.463  Sum_probs=52.2

Q ss_pred             cCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC-CCccccCChHHHHHHhhhhcCCCc
Q psy8793         264 HNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP-QCPMAYKTNISLSAHLMKHTGAKP  324 (345)
Q Consensus       264 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  324 (345)
                      -+.++|.|++|++.|. .+.|..|+++ ++++||.|+ .|++.|...+.|..|+++|.+..+
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            3567899999999999 9999999998 899999999 999999999999999998877654

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=1.9e-13  Score=81.06  Aligned_cols=44  Identities=27%  Similarity=0.441  Sum_probs=36.2

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            66778888888888888888888888888888888888888876

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.9e-13  Score=81.07  Aligned_cols=44  Identities=20%  Similarity=0.311  Sum_probs=33.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            56677777777777777777777777777777777777777776

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.36  E-value=1.7e-13  Score=90.15  Aligned_cols=58  Identities=34%  Similarity=0.796  Sum_probs=54.8

Q ss_pred             CCcCCCCccCC--CCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhccccccc
Q psy8793           1 WHQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTS   58 (345)
Q Consensus         1 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~   58 (345)
                      +|+++++|+|+  .|++.|.+...|..|+++|.++++|.|++|++.|.....|..|++.|
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   72 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTH   72 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhc
Confidence            47899999997  59999999999999999999999999999999999999999999875

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.5e-13  Score=81.55  Aligned_cols=44  Identities=20%  Similarity=0.336  Sum_probs=31.9

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777766

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.36  E-value=1.8e-13  Score=81.08  Aligned_cols=44  Identities=23%  Similarity=0.419  Sum_probs=34.3

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677777778888888888888888888777877788887776

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.6e-13  Score=81.32  Aligned_cols=45  Identities=27%  Similarity=0.441  Sum_probs=37.8

Q ss_pred             HHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       286 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      +|+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367778888888888888888888888888888888888888877

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=1.5e-13  Score=81.48  Aligned_cols=45  Identities=22%  Similarity=0.334  Sum_probs=35.3

Q ss_pred             HHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       286 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      +|+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            366677778888888888888888888888888888888888776

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.5e-13  Score=80.53  Aligned_cols=44  Identities=27%  Similarity=0.457  Sum_probs=35.6

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            66777888888888888888888888888888888888888776

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.7e-13  Score=81.23  Aligned_cols=44  Identities=25%  Similarity=0.389  Sum_probs=31.4

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777665

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=1.2e-13  Score=81.87  Aligned_cols=44  Identities=30%  Similarity=0.454  Sum_probs=28.0

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.6e-13  Score=80.39  Aligned_cols=44  Identities=25%  Similarity=0.460  Sum_probs=34.9

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            56677778888888888888888888888888888888888776

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.7e-13  Score=80.31  Aligned_cols=44  Identities=23%  Similarity=0.388  Sum_probs=35.7

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            56777888888888888888888888888888888888888776

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=2.4e-13  Score=80.55  Aligned_cols=44  Identities=23%  Similarity=0.360  Sum_probs=33.1

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777766

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.35  E-value=1.3e-13  Score=81.72  Aligned_cols=44  Identities=27%  Similarity=0.409  Sum_probs=29.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666665

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.2e-13  Score=80.77  Aligned_cols=44  Identities=27%  Similarity=0.461  Sum_probs=31.1

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777666

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=1.2e-13  Score=81.86  Aligned_cols=44  Identities=25%  Similarity=0.322  Sum_probs=28.2

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55556666666666666666666666666666666666666655

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.2e-13  Score=81.86  Aligned_cols=44  Identities=30%  Similarity=0.412  Sum_probs=29.2

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666665

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.34  E-value=1.9e-13  Score=81.02  Aligned_cols=44  Identities=27%  Similarity=0.446  Sum_probs=31.0

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666677777777777777777777777777777777777665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2e-13  Score=80.96  Aligned_cols=44  Identities=25%  Similarity=0.355  Sum_probs=25.5

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555555555555555555555555555555555555554

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=1.8e-13  Score=80.33  Aligned_cols=43  Identities=21%  Similarity=0.335  Sum_probs=24.6

Q ss_pred             HHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         288 QLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       288 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      +++|+++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            2 SSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455555555555555555555555555555555555555554

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2.8e-13  Score=80.28  Aligned_cols=44  Identities=27%  Similarity=0.432  Sum_probs=35.4

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56677788888888888888888888888888888888888776

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.2e-13  Score=81.87  Aligned_cols=44  Identities=23%  Similarity=0.331  Sum_probs=27.4

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=2e-13  Score=80.97  Aligned_cols=44  Identities=30%  Similarity=0.471  Sum_probs=28.2

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=1.9e-13  Score=81.00  Aligned_cols=44  Identities=30%  Similarity=0.473  Sum_probs=28.0

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=2.4e-13  Score=80.57  Aligned_cols=44  Identities=27%  Similarity=0.450  Sum_probs=31.1

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777665

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.6e-13  Score=80.42  Aligned_cols=44  Identities=25%  Similarity=0.358  Sum_probs=27.5

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666554

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=9.3e-16  Score=101.25  Aligned_cols=69  Identities=22%  Similarity=0.257  Sum_probs=44.0

Q ss_pred             hHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         227 SLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       227 ~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|..|+++|.++++|.|..|++.|.+...|..       +++|.|+.|++.|...+.|..|+++|+++++|.|++|
T Consensus         5 ~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            5 SSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             SCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             hHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            34445555555556666666666655555444       5667777777777777777777777777777777766

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.4e-13  Score=80.62  Aligned_cols=44  Identities=27%  Similarity=0.508  Sum_probs=29.4

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45566666666666666666666666666666666666666665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=1.6e-13  Score=81.37  Aligned_cols=44  Identities=16%  Similarity=0.120  Sum_probs=29.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            55566666666666666666666666666666666666666665

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.2e-13  Score=80.74  Aligned_cols=44  Identities=27%  Similarity=0.464  Sum_probs=27.2

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.2e-13  Score=80.77  Aligned_cols=44  Identities=25%  Similarity=0.437  Sum_probs=24.2

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            44455555555555555555555555555555555555555554

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.7e-13  Score=80.33  Aligned_cols=44  Identities=25%  Similarity=0.431  Sum_probs=26.9

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666555

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=2.5e-13  Score=80.53  Aligned_cols=44  Identities=25%  Similarity=0.449  Sum_probs=25.7

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            44555555555565566666665666666555655556665554

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.2e-13  Score=80.01  Aligned_cols=44  Identities=27%  Similarity=0.376  Sum_probs=27.3

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.33  E-value=2.9e-13  Score=80.25  Aligned_cols=44  Identities=23%  Similarity=0.399  Sum_probs=30.6

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            55666667777777777777777777777777777777777665

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=3.2e-13  Score=80.05  Aligned_cols=44  Identities=25%  Similarity=0.438  Sum_probs=29.9

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666666666666666666666666666666666666666665

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.1e-13  Score=80.87  Aligned_cols=44  Identities=27%  Similarity=0.460  Sum_probs=31.1

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            55666777777777777777777777777777777777777666

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.5e-13  Score=81.54  Aligned_cols=44  Identities=25%  Similarity=0.485  Sum_probs=32.9

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            56667777777777777777777777777777777777777766

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.7e-13  Score=80.38  Aligned_cols=44  Identities=18%  Similarity=0.210  Sum_probs=27.2

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.4e-13  Score=80.57  Aligned_cols=44  Identities=27%  Similarity=0.448  Sum_probs=29.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            55666666666777777777777777777666766667766654

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.8e-13  Score=81.10  Aligned_cols=44  Identities=30%  Similarity=0.449  Sum_probs=23.1

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            34445555555555555555555555555555555555555544

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=3.5e-13  Score=79.85  Aligned_cols=44  Identities=23%  Similarity=0.400  Sum_probs=26.5

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            44555566666666666666666666666666666666666555

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.31  E-value=3.7e-13  Score=79.74  Aligned_cols=44  Identities=20%  Similarity=0.225  Sum_probs=26.2

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555555666666666666666666666666666666666555

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.7e-13  Score=80.36  Aligned_cols=44  Identities=25%  Similarity=0.502  Sum_probs=28.2

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            45556666666666666666666666666666666666666655

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.31  E-value=3e-13  Score=80.12  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=28.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            44556666666666666666666666666666666666666665

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=6.4e-13  Score=79.10  Aligned_cols=44  Identities=32%  Similarity=0.461  Sum_probs=34.5

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhh-hhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLM-KHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  330 (345)
                      |+++|.++++|.|++|++.|...+.|..|++ +|++++||.|.+|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            5667777778888888888888888888877 7888888888776

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=4.4e-13  Score=79.42  Aligned_cols=44  Identities=27%  Similarity=0.415  Sum_probs=26.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|.++++|.|++|++.|...+.|..|+++|++++||.|.+|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            44555666666666666666666666666666666666666555

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.29  E-value=5.7e-14  Score=89.06  Aligned_cols=56  Identities=11%  Similarity=0.363  Sum_probs=38.2

Q ss_pred             HHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhhhc
Q psy8793         285 NRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISH  343 (345)
Q Consensus       285 ~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  343 (345)
                      ..|+++|++++||.|++|++.|...+.|.   ++|++++||.|.+|++.|....++..+
T Consensus         3 ~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~~~   58 (62)
T 1vd4_A            3 ETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAMPK   58 (62)
T ss_dssp             CCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCSCC
T ss_pred             hhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccccc
Confidence            34666677777777777777777666664   667777777777777777776665543

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.29  E-value=3e-12  Score=88.87  Aligned_cols=69  Identities=20%  Similarity=0.366  Sum_probs=46.4

Q ss_pred             cccCCCcccccChhhHHHHHHH-hcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHh
Q psy8793         213 FPCDKCEKVYSCASSLTKHMKA-RLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       213 ~~C~~C~~~f~~~~~l~~H~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                      +.|..|++.|.+...|..|++. |.++++..+..|                    .+|.|+.|++.|...+.|..|+++|
T Consensus        26 ~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c--------------------~~~~C~~C~k~f~~~~~L~~H~~~H   85 (95)
T 2ej4_A           26 RPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVC--------------------YWEECPREGKSFKAKYKLVNHIRVH   85 (95)
T ss_dssp             SSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCC--------------------CCTTCSSTTCCCSSHHHHHHHHHHH
T ss_pred             CcccccccccCCHHHHHHHHHHhccCCCCCCccce--------------------eccCCCCCCcccCCHHHHHHHHHhc
Confidence            5566666666666666666655 444433222211                    1278889999999999999999999


Q ss_pred             CCCCCcCCCC
Q psy8793         292 MDTRPYQCPQ  301 (345)
Q Consensus       292 ~~~~~~~C~~  301 (345)
                      ++++||.|..
T Consensus        86 ~~~k~~~C~~   95 (95)
T 2ej4_A           86 TGEKSGPSSG   95 (95)
T ss_dssp             HTCCCCSSCC
T ss_pred             CCCCCCCCCC
Confidence            9999998863

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.28  E-value=2.4e-12  Score=76.17  Aligned_cols=45  Identities=24%  Similarity=0.346  Sum_probs=42.7

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=7.9e-13  Score=78.29  Aligned_cols=44  Identities=32%  Similarity=0.569  Sum_probs=26.0

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44555556666666666666666666666666666666666543

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=1.9e-12  Score=79.48  Aligned_cols=44  Identities=23%  Similarity=0.508  Sum_probs=21.7

Q ss_pred             CCCCCcCCCCCccccCChHHHHHHhh-hhcCCCccccccchhhcc
Q psy8793         292 MDTRPYQCPQCPMAYKTNISLSAHLM-KHTGAKPYVCEICNKVLT  335 (345)
Q Consensus       292 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~  335 (345)
                      .++++|.|++|++.|.....|..|++ +|++++||.|.+|++.|.
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~   52 (54)
T 2eps_A            8 SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPS   52 (54)
T ss_dssp             CSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSC
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCC
Confidence            34444555555555555555555543 455555555555555544

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.4e-12  Score=76.15  Aligned_cols=45  Identities=22%  Similarity=0.340  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=2.3e-12  Score=76.21  Aligned_cols=45  Identities=27%  Similarity=0.434  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.27  E-value=2.3e-12  Score=76.25  Aligned_cols=45  Identities=24%  Similarity=0.409  Sum_probs=42.5

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.1e-12  Score=74.86  Aligned_cols=44  Identities=23%  Similarity=0.401  Sum_probs=41.6

Q ss_pred             HhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         259 HKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       259 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      |++.|.++++|.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56788899999999999999999999999999999999999988

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.27  E-value=2.2e-12  Score=79.14  Aligned_cols=47  Identities=28%  Similarity=0.589  Sum_probs=44.2

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHh-hhcCCCCccCCcCCccccc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFR-IHTGEKPFTCNICSRKFTT   47 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~   47 (345)
                      .|+++++|.|++|++.|.....|..|++ +|.+++||.|++|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            3789999999999999999999999997 8999999999999999975

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.3e-12  Score=76.21  Aligned_cols=45  Identities=22%  Similarity=0.385  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.3e-12  Score=76.23  Aligned_cols=45  Identities=20%  Similarity=0.416  Sum_probs=42.4

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=2.3e-12  Score=76.25  Aligned_cols=45  Identities=22%  Similarity=0.361  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.2e-12  Score=75.59  Aligned_cols=45  Identities=24%  Similarity=0.341  Sum_probs=42.7

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.1e-12  Score=75.68  Aligned_cols=45  Identities=27%  Similarity=0.457  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.7e-12  Score=75.90  Aligned_cols=45  Identities=24%  Similarity=0.313  Sum_probs=42.4

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.26  E-value=5.9e-12  Score=82.43  Aligned_cols=56  Identities=23%  Similarity=0.502  Sum_probs=44.5

Q ss_pred             cCCceeecCc--CccccCChHHHHHHHHHhCCCCCcCCCC--CccccCChHHHHHHhhhh
Q psy8793         264 HNNEIFKCTK--CDKVFQHIQLLNRHQLVHMDTRPYQCPQ--CPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       264 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  319 (345)
                      ...++|.|..  |++.|.....|..|+++|+++++|.|++  |++.|.....|..|+++|
T Consensus        13 ~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           13 SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             cccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            4566788877  8888888888888888888888888854  888888888888887765

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.26  E-value=8.4e-13  Score=84.86  Aligned_cols=53  Identities=19%  Similarity=0.385  Sum_probs=49.7

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc-cchhhccccchhhhccC
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE-ICNKVLTHRSSLISHYR  345 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~r  345 (345)
                      ..+.+||.|.+|++.|. .+.|..|+++ ++++||.|+ .|+++|..+.+|..|++
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~   58 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLK   58 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHH
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHH
Confidence            35678999999999999 9999999999 999999999 99999999999999985

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.5e-12  Score=76.10  Aligned_cols=45  Identities=27%  Similarity=0.443  Sum_probs=42.4

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.8e-12  Score=75.26  Aligned_cols=45  Identities=22%  Similarity=0.353  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999987

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=2.6e-12  Score=75.98  Aligned_cols=45  Identities=18%  Similarity=0.231  Sum_probs=42.7

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.3e-12  Score=75.52  Aligned_cols=45  Identities=22%  Similarity=0.380  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.2e-12  Score=75.63  Aligned_cols=45  Identities=31%  Similarity=0.544  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.25  E-value=3e-12  Score=75.73  Aligned_cols=45  Identities=27%  Similarity=0.462  Sum_probs=42.4

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.6e-12  Score=75.96  Aligned_cols=45  Identities=27%  Similarity=0.431  Sum_probs=42.4

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.25  E-value=2.5e-12  Score=76.07  Aligned_cols=45  Identities=22%  Similarity=0.290  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=1.9e-12  Score=74.97  Aligned_cols=42  Identities=21%  Similarity=0.335  Sum_probs=32.4

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|.+++||.|++|++.|...+.|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            456677777888888888888888888888888888888774

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.25  E-value=6e-12  Score=74.39  Aligned_cols=41  Identities=34%  Similarity=0.656  Sum_probs=39.7

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNIC   41 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   41 (345)
                      +|+++++|+|++|++.|.+...|..|+++|.+++||.|++|
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            6 SGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            58999999999999999999999999999999999999998

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.3e-12  Score=75.56  Aligned_cols=45  Identities=22%  Similarity=0.407  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.1e-12  Score=75.67  Aligned_cols=45  Identities=31%  Similarity=0.440  Sum_probs=42.3

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.8e-12  Score=75.83  Aligned_cols=45  Identities=24%  Similarity=0.355  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.5e-12  Score=75.44  Aligned_cols=45  Identities=24%  Similarity=0.409  Sum_probs=42.5

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|+.|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=2.6e-12  Score=76.00  Aligned_cols=45  Identities=27%  Similarity=0.449  Sum_probs=42.0

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.2e-12  Score=75.63  Aligned_cols=45  Identities=31%  Similarity=0.521  Sum_probs=42.3

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.25  E-value=1.4e-12  Score=75.49  Aligned_cols=42  Identities=21%  Similarity=0.395  Sum_probs=27.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            345566666666666666666666666666666666666663

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=3.4e-12  Score=75.51  Aligned_cols=45  Identities=27%  Similarity=0.295  Sum_probs=42.5

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.4e-12  Score=75.48  Aligned_cols=45  Identities=29%  Similarity=0.425  Sum_probs=42.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999988

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.24  E-value=2.6e-12  Score=76.02  Aligned_cols=45  Identities=27%  Similarity=0.422  Sum_probs=41.9

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            477888999999999999999999999999999999999999987

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.3e-12  Score=75.54  Aligned_cols=45  Identities=24%  Similarity=0.369  Sum_probs=42.3

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.5e-12  Score=76.11  Aligned_cols=44  Identities=30%  Similarity=0.471  Sum_probs=37.0

Q ss_pred             HHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc
Q psy8793         286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI  329 (345)
Q Consensus       286 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  329 (345)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778888888888888888888888888888888888888864

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=2.9e-12  Score=75.80  Aligned_cols=45  Identities=22%  Similarity=0.293  Sum_probs=42.3

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.2e-12  Score=75.60  Aligned_cols=45  Identities=27%  Similarity=0.299  Sum_probs=42.5

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.2e-12  Score=75.10  Aligned_cols=45  Identities=20%  Similarity=0.306  Sum_probs=42.1

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            467888999999999999999999999999999999999999988

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=5.8e-12  Score=74.45  Aligned_cols=45  Identities=20%  Similarity=0.334  Sum_probs=42.4

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467888999999999999999999999999999999999999988

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.4e-12  Score=76.16  Aligned_cols=43  Identities=28%  Similarity=0.449  Sum_probs=34.0

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI  329 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  329 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            5667778888888888888888888888888888888888753

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.2e-12  Score=75.11  Aligned_cols=45  Identities=24%  Similarity=0.395  Sum_probs=42.0

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            377888999999999999999999999999999999999999988

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.23  E-value=4.6e-12  Score=74.91  Aligned_cols=45  Identities=24%  Similarity=0.397  Sum_probs=42.4

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999988

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=6.1e-12  Score=74.38  Aligned_cols=45  Identities=24%  Similarity=0.293  Sum_probs=42.3

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999988

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.1e-12  Score=75.12  Aligned_cols=45  Identities=24%  Similarity=0.320  Sum_probs=41.8

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|+.|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367788999999999999999999999999999999999999988

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.8e-12  Score=75.85  Aligned_cols=45  Identities=29%  Similarity=0.461  Sum_probs=42.4

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.7e-12  Score=75.95  Aligned_cols=43  Identities=21%  Similarity=0.395  Sum_probs=33.9

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI  329 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  329 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            3 SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6667777888888888888888888888888888888888753

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.6e-12  Score=76.04  Aligned_cols=43  Identities=28%  Similarity=0.465  Sum_probs=35.3

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI  329 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  329 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            3 SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            6677888888888888888888888888888888888888853

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.9e-12  Score=75.81  Aligned_cols=44  Identities=23%  Similarity=0.426  Sum_probs=35.0

Q ss_pred             HHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc
Q psy8793         286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI  329 (345)
Q Consensus       286 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  329 (345)
                      +|+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36677788888888888888888888888888888888888863

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=3.7e-12  Score=74.93  Aligned_cols=42  Identities=26%  Similarity=0.430  Sum_probs=40.6

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICS   42 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   42 (345)
                      .|+++++|+|++|++.|.....|..|+++|.++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            489999999999999999999999999999999999999996

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4e-12  Score=75.19  Aligned_cols=45  Identities=29%  Similarity=0.382  Sum_probs=42.5

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=2.9e-12  Score=75.81  Aligned_cols=45  Identities=27%  Similarity=0.467  Sum_probs=41.8

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|+++|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.22  E-value=5.9e-12  Score=74.42  Aligned_cols=45  Identities=24%  Similarity=0.331  Sum_probs=42.1

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999988

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.8e-12  Score=75.85  Aligned_cols=42  Identities=26%  Similarity=0.487  Sum_probs=35.0

Q ss_pred             HHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         289 LVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       289 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      ++|.++++|.|.+|++.|...+.|..|+++|++++||.|.+|
T Consensus         5 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            567788888888888888888888888888888888888877

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.3e-12  Score=75.52  Aligned_cols=43  Identities=28%  Similarity=0.482  Sum_probs=34.2

Q ss_pred             HHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       286 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      +|+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            3667777888888888888888888888888888888888875

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.3e-12  Score=76.21  Aligned_cols=45  Identities=27%  Similarity=0.411  Sum_probs=42.3

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999988

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.1e-12  Score=75.69  Aligned_cols=43  Identities=28%  Similarity=0.553  Sum_probs=34.5

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI  329 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  329 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            3 SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             cccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            6677788888888888888888888888888888888888853

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3e-12  Score=75.71  Aligned_cols=43  Identities=26%  Similarity=0.398  Sum_probs=32.7

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI  329 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  329 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            3 SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5667777777777777777777777777777777777777753

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=3.2e-12  Score=75.61  Aligned_cols=43  Identities=23%  Similarity=0.458  Sum_probs=35.5

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI  329 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  329 (345)
                      |+++|+++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            5677888888888888888888888888888888888888863

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.6e-12  Score=74.88  Aligned_cols=45  Identities=24%  Similarity=0.375  Sum_probs=41.7

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999988

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.22  E-value=4.9e-12  Score=82.82  Aligned_cols=55  Identities=31%  Similarity=0.615  Sum_probs=51.3

Q ss_pred             hCCCCCcCCCC--CccccCChHHHHHHhhhhcCCCcccccc--chhhccccchhhhccC
Q psy8793         291 HMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGAKPYVCEI--CNKVLTHRSSLISHYR  345 (345)
Q Consensus       291 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~r  345 (345)
                      ....++|.|..  |++.|.....|..|+++|++++||.|.+  |++.|.+..+|..|++
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~   70 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR   70 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTT
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhh
Confidence            45678899988  9999999999999999999999999965  9999999999999986

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=2.3e-12  Score=76.26  Aligned_cols=42  Identities=29%  Similarity=0.447  Sum_probs=26.6

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.6e-12  Score=74.52  Aligned_cols=45  Identities=22%  Similarity=0.380  Sum_probs=42.2

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999876

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.21  E-value=2.1e-12  Score=76.37  Aligned_cols=42  Identities=24%  Similarity=0.492  Sum_probs=24.0

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555555555555555555555555555555555555554

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.6e-12  Score=74.20  Aligned_cols=44  Identities=23%  Similarity=0.299  Sum_probs=41.7

Q ss_pred             HhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         259 HKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       259 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      |++.|.++++|.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            66788899999999999999999999999999999999999988

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.4e-12  Score=76.20  Aligned_cols=42  Identities=29%  Similarity=0.560  Sum_probs=25.3

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            445555666666666666666666666666666666666654

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.6e-12  Score=75.38  Aligned_cols=43  Identities=23%  Similarity=0.403  Sum_probs=31.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI  329 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  329 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5566777777777777777777777777777777777777753

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.8e-12  Score=74.50  Aligned_cols=43  Identities=23%  Similarity=0.408  Sum_probs=35.4

Q ss_pred             HHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       286 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      +|+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            3667788888888888888888888888888888888888874

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=2.4e-12  Score=76.19  Aligned_cols=42  Identities=38%  Similarity=0.570  Sum_probs=24.7

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            445555555566666666666666666665566666666554

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.8e-12  Score=75.83  Aligned_cols=42  Identities=29%  Similarity=0.445  Sum_probs=26.4

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            455566666666666666666666666666666666666664

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.7e-12  Score=75.95  Aligned_cols=42  Identities=29%  Similarity=0.493  Sum_probs=27.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~   44 (46)
T 2eor_A            3 SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPS   44 (46)
T ss_dssp             SSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSST
T ss_pred             CCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCC
Confidence            555666666666666666666666666666666666666664

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=3.7e-12  Score=75.32  Aligned_cols=42  Identities=21%  Similarity=0.367  Sum_probs=30.9

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556677777777777777777777777777777777777774

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=2.6e-12  Score=75.98  Aligned_cols=42  Identities=29%  Similarity=0.529  Sum_probs=24.9

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445555556666666666666666666666666666666654

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.1e-12  Score=75.66  Aligned_cols=42  Identities=26%  Similarity=0.443  Sum_probs=28.5

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            555666666666766777776677777776666666666664

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=2e-12  Score=75.67  Aligned_cols=42  Identities=14%  Similarity=0.278  Sum_probs=27.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            555666666666666666666666666666666666666663

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=7e-12  Score=73.71  Aligned_cols=42  Identities=24%  Similarity=0.481  Sum_probs=26.4

Q ss_pred             HhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccch
Q psy8793         290 VHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICN  331 (345)
Q Consensus       290 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  331 (345)
                      +|+++++|.|.+|++.|...+.|..|+++|+++++|.|+.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            355566666666666666666666666666666666666664

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.9e-12  Score=75.82  Aligned_cols=42  Identities=29%  Similarity=0.483  Sum_probs=26.7

Q ss_pred             HHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         289 LVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       289 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      ++|+++++|.|++|++.|...+.|..|+++|++++||.|.+|
T Consensus         5 ~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            445666666666666666666666666666666666666655

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=2.9e-12  Score=75.79  Aligned_cols=42  Identities=29%  Similarity=0.540  Sum_probs=25.9

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            3 SGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            445566666666666666666666666666666666666664

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.3e-12  Score=73.93  Aligned_cols=41  Identities=32%  Similarity=0.522  Sum_probs=34.9

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC  327 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  327 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66778888888888888888888888888888888888887

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.20  E-value=6.9e-12  Score=74.86  Aligned_cols=42  Identities=21%  Similarity=0.468  Sum_probs=24.7

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchh
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNK  332 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  332 (345)
                      |.++++|.|.+|++.|.....|..|+++|++++||.|.+|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            344555666666666666666666666666666666666653

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=3.1e-12  Score=74.88  Aligned_cols=42  Identities=19%  Similarity=0.373  Sum_probs=31.1

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            566777777777777777777777777777777777777774

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=4.3e-12  Score=73.42  Aligned_cols=41  Identities=27%  Similarity=0.488  Sum_probs=33.4

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC  327 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  327 (345)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            55677888888888888888888888888888888888877

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=3.1e-12  Score=75.65  Aligned_cols=42  Identities=29%  Similarity=0.517  Sum_probs=27.3

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            455666666666666666666666666666666666666664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.9e-12  Score=76.58  Aligned_cols=42  Identities=24%  Similarity=0.339  Sum_probs=23.7

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            444555555555555555555555555555555555555553

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=2.4e-12  Score=76.13  Aligned_cols=44  Identities=20%  Similarity=0.357  Sum_probs=35.2

Q ss_pred             HHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc
Q psy8793         286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI  329 (345)
Q Consensus       286 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  329 (345)
                      +|+++|.++++|.|.+|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36677888888888888888888888888888888888888853

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.2e-11  Score=73.08  Aligned_cols=45  Identities=24%  Similarity=0.390  Sum_probs=42.1

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999876

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=3.1e-12  Score=74.87  Aligned_cols=42  Identities=14%  Similarity=0.294  Sum_probs=30.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|.++++|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            566677777777777777777777777777777777777763

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.19  E-value=2e-12  Score=79.36  Aligned_cols=50  Identities=24%  Similarity=0.293  Sum_probs=34.2

Q ss_pred             cccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcc
Q psy8793         276 KVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPY  325 (345)
Q Consensus       276 ~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  325 (345)
                      +.|...+.|..|+++|+++++|.|.+|++.|...+.|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45556666666767777777777777777777777777777777776665

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.1e-12  Score=74.35  Aligned_cols=41  Identities=27%  Similarity=0.501  Sum_probs=26.4

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC  327 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  327 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            3 SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            45556666666666666666666666666666666666666

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.5e-12  Score=74.12  Aligned_cols=45  Identities=22%  Similarity=0.321  Sum_probs=42.2

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHH-HhCCCCCcCCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQL-VHMDTRPYQCPQC  302 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  302 (345)
                      .|++.|.++++|.|++|++.|...+.|..|++ +|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            47788899999999999999999999999999 9999999999988

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.5e-12  Score=76.05  Aligned_cols=42  Identities=24%  Similarity=0.449  Sum_probs=24.2

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            445555555555555555555555555555555555555553

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=6.8e-12  Score=74.17  Aligned_cols=42  Identities=29%  Similarity=0.517  Sum_probs=35.1

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566788888888888888888888888888888888888885

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=9.5e-12  Score=73.51  Aligned_cols=41  Identities=39%  Similarity=0.583  Sum_probs=39.5

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNIC   41 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   41 (345)
                      +|+++++|.|++|++.|.+...|..|+++|.+++||.|++|
T Consensus         6 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            6 SGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            58999999999999999999999999999999999999998

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.17  E-value=7.1e-12  Score=74.80  Aligned_cols=42  Identities=33%  Similarity=0.518  Sum_probs=40.4

Q ss_pred             CcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCc
Q psy8793           2 HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSR   43 (345)
Q Consensus         2 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   43 (345)
                      |+++++|.|.+|++.|.+...|..|+++|.+++||.|++|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            7 GRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            678999999999999999999999999999999999999986

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=5.6e-12  Score=74.54  Aligned_cols=42  Identities=33%  Similarity=0.546  Sum_probs=30.6

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            556677777777777777777777777777777777777774

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=4e-12  Score=73.55  Aligned_cols=41  Identities=27%  Similarity=0.511  Sum_probs=28.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC  327 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  327 (345)
                      |+++|++++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            45566677777777777777777777777777777777766

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=4.9e-12  Score=74.80  Aligned_cols=42  Identities=17%  Similarity=0.273  Sum_probs=29.3

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcC-CCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTG-AKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~  328 (345)
                      |+++|.+++||.|.+|++.|...+.|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            55666667777777777777777777777777777 6777765

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.1e-11  Score=73.30  Aligned_cols=41  Identities=41%  Similarity=0.622  Sum_probs=39.6

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNIC   41 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   41 (345)
                      +|+++++|+|++|++.|.....|..|+++|.+++||.|++|
T Consensus         6 ~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            6 SGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            58999999999999999999999999999999999999988

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.16  E-value=5.7e-12  Score=72.89  Aligned_cols=40  Identities=23%  Similarity=0.335  Sum_probs=23.1

Q ss_pred             HHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccc
Q psy8793         288 QLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC  327 (345)
Q Consensus       288 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  327 (345)
                      +++|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         3 ~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            3 SGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3455555555555555555555555555555555555555

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=1.1e-11  Score=72.51  Aligned_cols=42  Identities=14%  Similarity=0.232  Sum_probs=31.2

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|.++++|.|.+|++.|...+.|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            456677777777777777777777777777777777777773

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=8.2e-12  Score=73.01  Aligned_cols=42  Identities=21%  Similarity=0.344  Sum_probs=29.8

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            3 SGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            556677777777777777777777777777777777777663

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.7e-12  Score=74.51  Aligned_cols=42  Identities=21%  Similarity=0.353  Sum_probs=27.3

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            3 SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            455666666666666666666666666666666666666663

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.15  E-value=2.5e-11  Score=70.11  Aligned_cols=42  Identities=19%  Similarity=0.354  Sum_probs=39.2

Q ss_pred             HhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC
Q psy8793         259 HKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP  300 (345)
Q Consensus       259 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  300 (345)
                      |++.|.++++|.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567788999999999999999999999999999999999995

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=4.9e-12  Score=74.80  Aligned_cols=42  Identities=26%  Similarity=0.451  Sum_probs=27.7

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |+++|+++++|.|.+|++.|...+.|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            555666666666666666666666666666666666666664

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.14  E-value=2.7e-11  Score=71.49  Aligned_cols=44  Identities=25%  Similarity=0.416  Sum_probs=41.1

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999974

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=2.4e-11  Score=71.72  Aligned_cols=44  Identities=23%  Similarity=0.402  Sum_probs=41.1

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=2.8e-11  Score=71.42  Aligned_cols=44  Identities=20%  Similarity=0.338  Sum_probs=41.1

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999974

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.13  E-value=3e-12  Score=80.97  Aligned_cols=55  Identities=20%  Similarity=0.413  Sum_probs=48.5

Q ss_pred             HHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHH
Q psy8793         256 VLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLS  313 (345)
Q Consensus       256 l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  313 (345)
                      |..|++.|.+++||.|+.|++.|...+.|.   ++|++++||.|++|++.|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            456888899999999999999999988886   8899999999999999998876543

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.3e-11  Score=71.14  Aligned_cols=44  Identities=25%  Similarity=0.398  Sum_probs=41.0

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.3e-11  Score=71.12  Aligned_cols=44  Identities=23%  Similarity=0.394  Sum_probs=41.1

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999974

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.9e-11  Score=69.29  Aligned_cols=42  Identities=17%  Similarity=0.320  Sum_probs=38.7

Q ss_pred             HhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC
Q psy8793         259 HKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP  300 (345)
Q Consensus       259 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  300 (345)
                      |++.|.++++|.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788999999999999999999999999999999999985

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.9e-11  Score=70.82  Aligned_cols=44  Identities=23%  Similarity=0.413  Sum_probs=41.0

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.11  E-value=3.9e-11  Score=69.66  Aligned_cols=39  Identities=15%  Similarity=0.314  Sum_probs=28.4

Q ss_pred             HhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         290 VHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       290 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      +|+++++|.|..|++.|...+.|..|+++|++++||.|+
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   42 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSS   42 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCC
Confidence            466677777777777777777777777777777777775

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.6e-11  Score=70.96  Aligned_cols=44  Identities=25%  Similarity=0.387  Sum_probs=41.0

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999974

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.7e-11  Score=70.91  Aligned_cols=44  Identities=23%  Similarity=0.286  Sum_probs=41.1

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999974

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.8e-11  Score=70.84  Aligned_cols=44  Identities=25%  Similarity=0.341  Sum_probs=41.0

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTBC
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999963

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=3.3e-11  Score=71.11  Aligned_cols=44  Identities=25%  Similarity=0.440  Sum_probs=40.9

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            47788899999999999999999999999999999999999974

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=3.1e-11  Score=71.23  Aligned_cols=41  Identities=22%  Similarity=0.280  Sum_probs=30.8

Q ss_pred             HHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         288 QLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       288 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      +++|+++++|.|.+|++.|...+.|..|+++|++++||.|.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            34567777777777777777777777777777777777775

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3e-11  Score=71.30  Aligned_cols=44  Identities=27%  Similarity=0.461  Sum_probs=40.5

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999974

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.8e-11  Score=70.88  Aligned_cols=44  Identities=27%  Similarity=0.443  Sum_probs=40.7

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36788899999999999999999999999999999999999974

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.9e-11  Score=70.83  Aligned_cols=44  Identities=25%  Similarity=0.445  Sum_probs=40.9

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=1.8e-11  Score=73.05  Aligned_cols=42  Identities=24%  Similarity=0.415  Sum_probs=26.7

Q ss_pred             HHhCCCCCcCCC--CCccccCChHHHHHHhhhhcCCCccccccc
Q psy8793         289 LVHMDTRPYQCP--QCPMAYKTNISLSAHLMKHTGAKPYVCEIC  330 (345)
Q Consensus       289 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  330 (345)
                      ++|+++++|.|.  .|++.|...+.|..|+++|++++||.|.+|
T Consensus         5 ~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            455666666665  566666666666666666666666666655

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.7e-11  Score=70.91  Aligned_cols=44  Identities=27%  Similarity=0.421  Sum_probs=40.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999974

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.5e-11  Score=71.03  Aligned_cols=44  Identities=27%  Similarity=0.434  Sum_probs=40.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999974

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.10  E-value=6e-11  Score=68.84  Aligned_cols=40  Identities=20%  Similarity=0.331  Sum_probs=38.1

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNI   40 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   40 (345)
                      +|+++++|+|.+|++.|.....|..|+++|.+++||.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            5899999999999999999999999999999999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.6e-11  Score=69.72  Aligned_cols=43  Identities=21%  Similarity=0.292  Sum_probs=40.2

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP  300 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  300 (345)
                      .|++.|.++++|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4778889999999999999999999999999999999999985

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.6e-11  Score=70.94  Aligned_cols=44  Identities=32%  Similarity=0.455  Sum_probs=40.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999974

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.5e-11  Score=70.52  Aligned_cols=44  Identities=23%  Similarity=0.434  Sum_probs=40.9

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.9e-11  Score=70.82  Aligned_cols=44  Identities=23%  Similarity=0.386  Sum_probs=40.7

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      +|++.|.++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=4.8e-11  Score=70.40  Aligned_cols=44  Identities=27%  Similarity=0.490  Sum_probs=40.6

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46778899999999999999999999999999999999999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.8e-11  Score=69.67  Aligned_cols=43  Identities=28%  Similarity=0.438  Sum_probs=40.2

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP  300 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  300 (345)
                      +|++.|.++++|.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4778889999999999999999999999999999999999985

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.5e-11  Score=70.13  Aligned_cols=40  Identities=35%  Similarity=0.647  Sum_probs=37.9

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNI   40 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   40 (345)
                      +|+++++|+|++|++.|.+...|..|+++|.+++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            6 SGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             SCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            5899999999999999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=3.3e-11  Score=71.16  Aligned_cols=44  Identities=27%  Similarity=0.475  Sum_probs=40.3

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            46778889999999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.1e-11  Score=70.70  Aligned_cols=44  Identities=25%  Similarity=0.468  Sum_probs=40.5

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=8.7e-11  Score=69.28  Aligned_cols=40  Identities=48%  Similarity=0.743  Sum_probs=37.9

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNI   40 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   40 (345)
                      +|+++++|+|++|++.|.....|..|+++|.+++||.|++
T Consensus         6 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            6 SGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             ccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            5899999999999999999999999999999999999974

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=3.8e-11  Score=70.09  Aligned_cols=43  Identities=23%  Similarity=0.330  Sum_probs=40.1

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP  300 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  300 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4778899999999999999999999999999999999999985

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.07  E-value=8.2e-11  Score=67.87  Aligned_cols=41  Identities=22%  Similarity=0.308  Sum_probs=38.5

Q ss_pred             HhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCC
Q psy8793         259 HKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQC  299 (345)
Q Consensus       259 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  299 (345)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56778899999999999999999999999999999999988

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.07  E-value=5.7e-11  Score=69.35  Aligned_cols=43  Identities=23%  Similarity=0.358  Sum_probs=40.2

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP  300 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  300 (345)
                      .|++.|.++++|.|+.|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4778899999999999999999999999999999999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=4.6e-11  Score=69.74  Aligned_cols=43  Identities=19%  Similarity=0.241  Sum_probs=39.7

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP  300 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  300 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4778888999999999999999999999999999999999985

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1e-10  Score=68.96  Aligned_cols=40  Identities=43%  Similarity=0.600  Sum_probs=38.0

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNI   40 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   40 (345)
                      +|+++++|+|++|++.|.....|..|+++|.+++||.|.+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            6 SGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            5899999999999999999999999999999999999974

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=5.9e-11  Score=68.08  Aligned_cols=38  Identities=29%  Similarity=0.510  Sum_probs=26.6

Q ss_pred             HhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccc
Q psy8793         290 VHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC  327 (345)
Q Consensus       290 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  327 (345)
                      +|+++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            46666777777777777777777777777777777766

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.1e-11  Score=69.95  Aligned_cols=44  Identities=23%  Similarity=0.420  Sum_probs=40.7

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|+.|++.|...+.|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999964

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=1.5e-10  Score=68.20  Aligned_cols=40  Identities=40%  Similarity=0.726  Sum_probs=37.7

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNI   40 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   40 (345)
                      +|+++++|+|++|++.|.....|..|+++|.+++||.|+.
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            6 SGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5899999999999999999999999999999999999973

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=2.9e-11  Score=71.03  Aligned_cols=39  Identities=23%  Similarity=0.510  Sum_probs=22.8

Q ss_pred             HhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccc
Q psy8793         290 VHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       290 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      +|+++++|.|.+|++.|.....|..|+++|++++||.|+
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            455555556666666666666666665566655665554

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=6e-11  Score=68.46  Aligned_cols=41  Identities=24%  Similarity=0.487  Sum_probs=38.1

Q ss_pred             HhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCC
Q psy8793         259 HKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQC  299 (345)
Q Consensus       259 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  299 (345)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56778899999999999999999999999999999999988

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.05  E-value=7.3e-11  Score=72.27  Aligned_cols=51  Identities=20%  Similarity=0.294  Sum_probs=46.5

Q ss_pred             ccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcC
Q psy8793         248 KEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQ  298 (345)
Q Consensus       248 ~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  298 (345)
                      +.|.....|..|++.|.++++|.|+.|++.|...+.|..|+++|++++||.
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            567778889999999999999999999999999999999999999998873

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.5e-11  Score=68.32  Aligned_cols=41  Identities=24%  Similarity=0.486  Sum_probs=38.6

Q ss_pred             HhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCC
Q psy8793         259 HKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQC  299 (345)
Q Consensus       259 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  299 (345)
                      |++.|.++++|.|+.|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            66788899999999999999999999999999999999988

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=9.4e-11  Score=69.12  Aligned_cols=44  Identities=25%  Similarity=0.487  Sum_probs=40.5

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCC-CCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMD-TRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  301 (345)
                      .|++.|.++++|.|+.|++.|...+.|..|+++|++ ++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888999999999999999999999999999999 99999974

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=5.5e-11  Score=70.15  Aligned_cols=43  Identities=23%  Similarity=0.284  Sum_probs=40.4

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP  300 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  300 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778899999999999999999999999999999999999996

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=5.9e-11  Score=69.27  Aligned_cols=43  Identities=26%  Similarity=0.434  Sum_probs=40.1

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP  300 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  300 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4778889999999999999999999999999999999999984

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.2e-10  Score=67.96  Aligned_cols=42  Identities=26%  Similarity=0.410  Sum_probs=38.8

Q ss_pred             HhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC
Q psy8793         259 HKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP  300 (345)
Q Consensus       259 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  300 (345)
                      |++.|.++++|.|++|++.|...+.|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            567788999999999999999999999999999999999985

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=8.5e-11  Score=67.41  Aligned_cols=38  Identities=45%  Similarity=0.792  Sum_probs=36.4

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC   38 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   38 (345)
                      +|+++++|+|++|++.|.....|..|+++|.+++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            58999999999999999999999999999999999988

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.2e-10  Score=67.11  Aligned_cols=38  Identities=50%  Similarity=0.846  Sum_probs=35.6

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC   38 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   38 (345)
                      +|+++++|+|++|++.|.....|..|+.+|.+++||.|
T Consensus         5 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            5 SSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             ccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            58899999999999999999999999999999999987

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=6.7e-11  Score=69.41  Aligned_cols=40  Identities=45%  Similarity=0.724  Sum_probs=38.0

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNI   40 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   40 (345)
                      +|+++++|+|++|++.|.....|..|+++|.+++||.|++
T Consensus         6 ~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            6 SGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            5899999999999999999999999999999999999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=69.54  Aligned_cols=41  Identities=29%  Similarity=0.478  Sum_probs=39.3

Q ss_pred             CCcCCCCccCC--CCCCCCCCCchhHHHHhhhcCCCCccCCcC
Q psy8793           1 WHQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPFTCNIC   41 (345)
Q Consensus         1 ~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C   41 (345)
                      +|+++++|+|.  .|++.|.....|..|+++|.+++||.|.+|
T Consensus         6 ~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            6 SGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             SSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            58999999998  899999999999999999999999999988

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=7.5e-11  Score=69.56  Aligned_cols=44  Identities=23%  Similarity=0.301  Sum_probs=40.3

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|+++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46788899999999999999999999999999999999999963

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=1.7e-10  Score=67.23  Aligned_cols=43  Identities=21%  Similarity=0.305  Sum_probs=39.9

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCP  300 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  300 (345)
                      .|++.|.++++|.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            4778899999999999999999999999999999999999874

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=2.2e-11  Score=80.00  Aligned_cols=67  Identities=19%  Similarity=0.220  Sum_probs=54.1

Q ss_pred             hHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         254 SSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       254 ~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      ..|..|+..+.+.+++.|++|++.|. .+.|..|+ .|.+++|+.|+.|++.|. ...|..|+.+|.+++
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccCCc
Confidence            45667777788888888888888884 88888888 888888888888888876 488888888887653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.96  E-value=2.5e-11  Score=82.25  Aligned_cols=58  Identities=17%  Similarity=0.260  Sum_probs=48.5

Q ss_pred             hhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         260 KQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       260 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      ...|.++++|.|+.|++.|...+.|..|+++|++++||.|..|..    ...|..|.+.|.+
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            456788899999999999999999999999999999999987764    4556677788877

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=3e-11  Score=79.32  Aligned_cols=60  Identities=20%  Similarity=0.358  Sum_probs=54.4

Q ss_pred             HHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhhhccC
Q psy8793         283 LLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR  345 (345)
Q Consensus       283 ~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~r  345 (345)
                      .|..|+++|.+.+++.|+.|++.| ..+.|..|+ .|.+++||.|+.|++.|. +.+|..|++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~-~~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~   63 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLEL-SILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPE   63 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEE-CHHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHH
T ss_pred             HHHhhCcccCCCcccCCcccChHh-hHHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHH
Confidence            466788889999999999999999 599999999 999999999999999877 599999973

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.88  E-value=9.6e-10  Score=62.10  Aligned_cols=37  Identities=19%  Similarity=0.472  Sum_probs=22.2

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccc
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVC  327 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  327 (345)
                      |+++++|.|.+|++.|...+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3455666666666666666666666666666666554

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.86  E-value=8.1e-10  Score=62.41  Aligned_cols=37  Identities=22%  Similarity=0.455  Sum_probs=34.4

Q ss_pred             CcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccC
Q psy8793           2 HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTC   38 (345)
Q Consensus         2 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   38 (345)
                      |+++++|.|++|++.|.....|..|+.+|.+++||.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            7899999999999999999999999999999999876

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.83  E-value=1.2e-09  Score=60.92  Aligned_cols=36  Identities=22%  Similarity=0.494  Sum_probs=26.6

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      |+++|++++||.|+.|++.|...+.|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            556677777777777777777777777777777653

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.82  E-value=2.8e-09  Score=66.41  Aligned_cols=36  Identities=28%  Similarity=0.524  Sum_probs=21.6

Q ss_pred             CCCCCcCCCC--CccccCChHHHHHHh-hhhcCCCcccc
Q psy8793         292 MDTRPYQCPQ--CPMAYKTNISLSAHL-MKHTGAKPYVC  327 (345)
Q Consensus       292 ~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C  327 (345)
                      ++++||.|..  |+++|+..+.|..|+ ++|++++||.|
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            4556666643  666666666666665 35666666665

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.80  E-value=1.2e-09  Score=60.91  Aligned_cols=35  Identities=17%  Similarity=0.470  Sum_probs=21.9

Q ss_pred             HhCCCCCcCCCCCccccCChHHHHHHhhhhcCCCc
Q psy8793         290 VHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKP  324 (345)
Q Consensus       290 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  324 (345)
                      +|+++++|.|.+|++.|...+.|..|+++|++++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            45566666666666666666666666666666543

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.80  E-value=3.2e-09  Score=66.12  Aligned_cols=39  Identities=26%  Similarity=0.503  Sum_probs=35.5

Q ss_pred             CcCCCCccCCC--CCCCCCCCchhHHHH-hhhcCCCCccCCc
Q psy8793           2 HQGIKQYQCSQ--CPKAFNQKGNLKEHF-RIHTGEKPFTCNI   40 (345)
Q Consensus         2 h~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~   40 (345)
                      ++|||||+|+.  |+++|.....|..|+ ++|++++||.|-.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            47999999976  999999999999998 6899999999875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.79  E-value=2.2e-09  Score=58.88  Aligned_cols=35  Identities=29%  Similarity=0.589  Sum_probs=32.1

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKP   35 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   35 (345)
                      +|+++++|+|.+|++.|.....|..|+++|.+++|
T Consensus         1 ~H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            1 GSSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CCSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            58999999999999999999999999999988764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.78  E-value=2.3e-09  Score=58.80  Aligned_cols=35  Identities=29%  Similarity=0.474  Sum_probs=32.2

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKP   35 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   35 (345)
                      +|+++++|.|.+|++.|.....|..|+++|.+++|
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            1 GSSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            58999999999999999999999999999988764

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.78  E-value=1e-09  Score=74.18  Aligned_cols=57  Identities=18%  Similarity=0.253  Sum_probs=49.1

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhcccccccccc
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSARN   61 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~   61 (345)
                      +|+++++|+|++|++.|.....|..|+.+|.+++||.|..|.    ....|..|.+.+.+.
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCS----CCCCCCCCCCCCCCS
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhh----hHHHHHhhhcccccc
Confidence            488999999999999999999999999999999999998765    466777777775543

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.76  E-value=5.9e-09  Score=56.31  Aligned_cols=32  Identities=25%  Similarity=0.487  Sum_probs=20.3

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcCCCccc
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYV  326 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  326 (345)
                      +||.|.+|++.|...+.|..|+++|++++||.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            35666666666666666666666666666654

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=3.3e-09  Score=59.03  Aligned_cols=35  Identities=23%  Similarity=0.486  Sum_probs=31.6

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKP   35 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   35 (345)
                      +|+++++|.|++|++.|.....|..|+.+|.+++|
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            3 SGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            58899999999999999999999999999988764

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.73  E-value=4.7e-09  Score=57.53  Aligned_cols=33  Identities=24%  Similarity=0.518  Sum_probs=18.0

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      |+++++|.|.+|++.|...+.|..|+++|++++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~k   34 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAA   34 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTT
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCC
Confidence            445555555555555555555555555555544

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.73  E-value=5.5e-09  Score=57.27  Aligned_cols=33  Identities=30%  Similarity=0.556  Sum_probs=19.2

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      |.++++|.|.+|++.|...+.|..|+++|++++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCC
Confidence            445555666666666666666666655555554

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.69  E-value=5.9e-09  Score=57.89  Aligned_cols=32  Identities=22%  Similarity=0.392  Sum_probs=29.1

Q ss_pred             CcCCCCccCCC--CCCCCCCCchhHHHHhhhcCC
Q psy8793           2 HQGIKQYQCSQ--CPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         2 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      +++|+||+|++  |+++|..+..|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            67899999986  999999999999999999865

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.68  E-value=1.6e-08  Score=54.57  Aligned_cols=33  Identities=24%  Similarity=0.369  Sum_probs=29.7

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhCCCCCcCC
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQC  299 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  299 (345)
                      +||.|++|++.|...+.|..|+++|+++++|.+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~r   33 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEERR   33 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCCC
Confidence            479999999999999999999999999998853

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.66  E-value=1.3e-08  Score=56.45  Aligned_cols=31  Identities=29%  Similarity=0.480  Sum_probs=15.6

Q ss_pred             CCCCCcCCCC--CccccCChHHHHHHhhhhcCC
Q psy8793         292 MDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       292 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      ++++||.|++  |++.|...+.|..|+++|+++
T Consensus         5 ~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            5 SSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4445555543  555555555555555555443

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.65  E-value=1.3e-08  Score=56.50  Aligned_cols=36  Identities=25%  Similarity=0.469  Sum_probs=32.4

Q ss_pred             HhhhhcCCceeecCcCccccCChHHHHHHHHHhCCC
Q psy8793         259 HKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDT  294 (345)
Q Consensus       259 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  294 (345)
                      |++.|.+++||.|+.|++.|...+.|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            677888999999999999999999999999999764

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.63  E-value=1.1e-08  Score=56.33  Aligned_cols=33  Identities=45%  Similarity=0.659  Sum_probs=29.7

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      +|+++++|+|++|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            588999999999999999999999999998865

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.62  E-value=1.6e-08  Score=56.47  Aligned_cols=35  Identities=23%  Similarity=0.512  Sum_probs=20.6

Q ss_pred             hCCCCCcCCC--CCccccCChHHHHHHhhhhcCCCcc
Q psy8793         291 HMDTRPYQCP--QCPMAYKTNISLSAHLMKHTGAKPY  325 (345)
Q Consensus       291 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  325 (345)
                      |+++++|.|.  .|++.|...+.|..|+++|++++||
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            3455566665  3666666666666666666665554

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.61  E-value=1.5e-08  Score=56.22  Aligned_cols=33  Identities=21%  Similarity=0.420  Sum_probs=29.8

Q ss_pred             CCcCCCCccCCCCCCCCCCC-chhHHHHhhhcCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQK-GNLKEHFRIHTGE   33 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~   33 (345)
                      +|+++++|+|++|++.|... ..|..|+.+|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            58899999999999999998 9999999999765

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=1.5e-08  Score=55.91  Aligned_cols=33  Identities=36%  Similarity=0.534  Sum_probs=29.2

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      .|++++||+|++|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            478999999999999999999999999988765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=1.4e-08  Score=56.76  Aligned_cols=35  Identities=23%  Similarity=0.427  Sum_probs=32.8

Q ss_pred             CcCCCCccCC--CCCCCCCCCchhHHHHhhhcCCCCc
Q psy8793           2 HQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTGEKPF   36 (345)
Q Consensus         2 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~   36 (345)
                      |+++++|+|.  .|++.|.....|..|+++|.++++|
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            7899999999  5999999999999999999998886

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.60  E-value=1e-08  Score=56.02  Aligned_cols=32  Identities=22%  Similarity=0.502  Sum_probs=28.6

Q ss_pred             CcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCc
Q psy8793           2 HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNI   40 (345)
Q Consensus         2 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~   40 (345)
                      +.||+||+|++|+++|.....|..|+       ||.|..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            57899999999999999999999998       677764

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.59  E-value=1.9e-08  Score=54.94  Aligned_cols=32  Identities=25%  Similarity=0.635  Sum_probs=21.8

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCCCcccccc
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEI  329 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  329 (345)
                      +.+++||.|++|+++|+..++|..|+       ||.|+.
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~-------py~C~~   34 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQ-------AYYCSH   34 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHH-------HHTSTT
T ss_pred             CCCccCeECCCCCCccCCHhHccCcC-------CeECcC
Confidence            35667777777777777777777776       666643

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=3.2e-08  Score=54.43  Aligned_cols=34  Identities=35%  Similarity=0.531  Sum_probs=30.3

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEK   34 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   34 (345)
                      .|+++++|.|++|++.|.....|..|+++|.+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~ek   36 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTADG   36 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSCC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCCC
Confidence            4789999999999999999999999999998653

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=1.8e-08  Score=55.95  Aligned_cols=33  Identities=27%  Similarity=0.600  Sum_probs=19.5

Q ss_pred             HhCCCCCcCCCCCccccCCh-HHHHHHhhhhcCC
Q psy8793         290 VHMDTRPYQCPQCPMAYKTN-ISLSAHLMKHTGA  322 (345)
Q Consensus       290 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~  322 (345)
                      +|.+++||.|++|++.|... +.|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCC
Confidence            35555666666666666665 6666666665554

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=2.2e-08  Score=55.15  Aligned_cols=32  Identities=19%  Similarity=0.453  Sum_probs=18.0

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      |.+++||.|.+|++.|...+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            44555555555555555555555555555543

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=2.1e-08  Score=55.23  Aligned_cols=33  Identities=18%  Similarity=0.405  Sum_probs=28.2

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      .|++++||+|.+|++.|.....|..|+.+|.++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            378889999999999999989999998888765

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=1.1e-08  Score=56.83  Aligned_cols=31  Identities=29%  Similarity=0.494  Sum_probs=14.9

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHH-hhhhcC
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAH-LMKHTG  321 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  321 (345)
                      |++++||.|..|++.|...+.|..| +++|++
T Consensus         4 H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~   35 (37)
T 2elm_A            4 GSSGHLYYCSQCHYSSITKNCLKRHVIQKHSN   35 (37)
T ss_dssp             SSSSCEEECSSSSCEEECHHHHHHHHHHHTCC
T ss_pred             cCCCcCeECCCCCcccCCHHHHHHHHHHHccC
Confidence            4444444444455455444445444 444443

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.56  E-value=2.9e-08  Score=54.61  Aligned_cols=32  Identities=44%  Similarity=0.851  Sum_probs=16.2

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      |.+++||.|.+|++.|...+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            44445555555555555555555555555443

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.55  E-value=1.7e-08  Score=59.72  Aligned_cols=34  Identities=26%  Similarity=0.529  Sum_probs=26.7

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHh-hhcCCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFR-IHTGEK   34 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~   34 (345)
                      +|+++++|+|.+|++.|.....|..|++ +|.++.
T Consensus         1 ~Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            1 GEDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             -CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            5888888888888888888888888888 787653

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=3.1e-08  Score=54.52  Aligned_cols=32  Identities=25%  Similarity=0.640  Sum_probs=17.2

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      |.+++||.|.+|++.|...+.|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            4 GSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            44555555555555555555555555555543

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=5.1e-08  Score=53.60  Aligned_cols=32  Identities=22%  Similarity=0.414  Sum_probs=21.0

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      |.++++|.|.+|++.|.....|..|+++|+++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            45566666666666666666666666666654

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=4.1e-08  Score=54.01  Aligned_cols=33  Identities=39%  Similarity=0.650  Sum_probs=29.2

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      .|+++++|+|++|++.|.....|..|+++|.++
T Consensus         3 ~~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            378899999999999999999999999998765

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=6.5e-08  Score=53.20  Aligned_cols=31  Identities=32%  Similarity=0.543  Sum_probs=15.4

Q ss_pred             CCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         292 MDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       292 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      .++++|.|++|++.|...+.|..|+++|+++
T Consensus         5 ~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            5 SSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             SCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            4444555555555555555555555555443

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.49  E-value=7.6e-09  Score=55.40  Aligned_cols=31  Identities=23%  Similarity=0.491  Sum_probs=23.6

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcCCCcc
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPY  325 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  325 (345)
                      +||.|.+|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4677777777777777777777777777765

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.45  E-value=1.1e-07  Score=52.66  Aligned_cols=34  Identities=21%  Similarity=0.365  Sum_probs=30.5

Q ss_pred             hhhcCCceeecCcCccccCChHHHHHH-HHHhCCC
Q psy8793         261 QSIHNNEIFKCTKCDKVFQHIQLLNRH-QLVHMDT  294 (345)
Q Consensus       261 ~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  294 (345)
                      +.|.+++||.|+.|++.|...+.|..| ++.|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            457789999999999999999999999 8899864

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.45  E-value=6.5e-08  Score=57.15  Aligned_cols=32  Identities=31%  Similarity=0.584  Sum_probs=17.1

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhh-hhcCC
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLM-KHTGA  322 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~  322 (345)
                      |+++++|.|.+|++.|.....|..|++ +|+++
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCC
Confidence            445555555555555555555555555 55543

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.41  E-value=8.7e-08  Score=53.05  Aligned_cols=33  Identities=36%  Similarity=0.675  Sum_probs=29.5

Q ss_pred             CcCCCCccCCC--CCCCCCCCchhHHHHhhhcCCC
Q psy8793           2 HQGIKQYQCSQ--CPKAFNQKGNLKEHFRIHTGEK   34 (345)
Q Consensus         2 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~   34 (345)
                      |+++++|.|.+  |++.|.....|..|+++|.+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            78999999985  9999999999999999998753

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.39  E-value=1.5e-07  Score=52.11  Aligned_cols=32  Identities=31%  Similarity=0.457  Sum_probs=16.8

Q ss_pred             hCCCCCcCCC--CCccccCChHHHHHHhhhhcCC
Q psy8793         291 HMDTRPYQCP--QCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       291 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      |+++++|.|.  .|++.|...+.|..|+++|+++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            3445555554  2555555555555555555543

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.39  E-value=2.4e-07  Score=58.34  Aligned_cols=41  Identities=17%  Similarity=0.278  Sum_probs=33.4

Q ss_pred             CcCCCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCc
Q psy8793           2 HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSR   43 (345)
Q Consensus         2 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~   43 (345)
                      |.+++||+|.+|++.|.....|..|+++|++.. ..+.+++.
T Consensus         8 ~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~~   48 (66)
T 2epp_A            8 LREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYIDL   48 (66)
T ss_dssp             CCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCCC
T ss_pred             CCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-cccccccC
Confidence            678899999999999999999999999998764 55555544

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.36  E-value=2.6e-08  Score=53.23  Aligned_cols=31  Identities=23%  Similarity=0.515  Sum_probs=23.4

Q ss_pred             CCccCCCCCCCCCCCchhHHHHhhhcCCCCc
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHFRIHTGEKPF   36 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~   36 (345)
                      +||+|++|++.|.....|..|+++|.+++||
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4677777777777777777777777777665

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.36  E-value=3.2e-07  Score=47.40  Aligned_cols=27  Identities=26%  Similarity=0.555  Sum_probs=15.0

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      ||.|+.|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            2 SFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555543

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.34  E-value=2.3e-07  Score=47.99  Aligned_cols=27  Identities=26%  Similarity=0.769  Sum_probs=14.2

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      ||.|+.|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            2 KFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            455555555555555555555555443

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=4.3e-07  Score=47.28  Aligned_cols=27  Identities=22%  Similarity=0.443  Sum_probs=13.6

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhCC
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHMD  293 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  293 (345)
                      ++|.|..|++.|...+.|..|+++|++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            345555555555555555555555444

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.33  E-value=2.8e-07  Score=48.05  Aligned_cols=30  Identities=33%  Similarity=0.626  Sum_probs=27.3

Q ss_pred             CCCcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         294 TRPYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       294 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      ++||.|..|++.|...+.|..|+++|++++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhccCC
Confidence            478999999999999999999999998864

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.32  E-value=4.1e-07  Score=47.35  Aligned_cols=28  Identities=21%  Similarity=0.520  Sum_probs=17.7

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      +|.|.+|++.|...+.|..|+++|++++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            2 TYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            5666666666666666666666666554

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.31  E-value=4.9e-07  Score=47.60  Aligned_cols=27  Identities=30%  Similarity=0.652  Sum_probs=17.4

Q ss_pred             CcCCC--CCccccCChHHHHHHhhhhcCC
Q psy8793         296 PYQCP--QCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       296 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      ||.|+  .|++.|...+.|..|+++|+++
T Consensus         2 p~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            56665  6666666666666666666654

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.31  E-value=5e-07  Score=46.62  Aligned_cols=29  Identities=28%  Similarity=0.621  Sum_probs=25.2

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhCCCC
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      ++|.|+.|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCCC
Confidence            46899999999999999999999998753

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.30  E-value=3.7e-07  Score=47.16  Aligned_cols=29  Identities=31%  Similarity=0.594  Sum_probs=25.5

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhCCCC
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      +||.|+.|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCCC
Confidence            47899999999999999999999998763

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.30  E-value=1.1e-07  Score=55.84  Aligned_cols=35  Identities=20%  Similarity=0.432  Sum_probs=18.7

Q ss_pred             hhhhcCCceeecC--cCccccCChHHHHHHHHHhCCC
Q psy8793         260 KQSIHNNEIFKCT--KCDKVFQHIQLLNRHQLVHMDT  294 (345)
Q Consensus       260 ~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  294 (345)
                      ...|.++++|.|+  .|++.|...+.|..|+++|+++
T Consensus        10 ~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           10 YVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCC
Confidence            3345555555553  4555555555555555555543

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.29  E-value=4.3e-07  Score=46.84  Aligned_cols=28  Identities=29%  Similarity=0.590  Sum_probs=18.9

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      +||.|+.|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            3566777777777777777777666654

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.29  E-value=7e-07  Score=47.34  Aligned_cols=28  Identities=36%  Similarity=0.669  Sum_probs=19.1

Q ss_pred             CCcCCC--CCccccCChHHHHHHhhhhcCC
Q psy8793         295 RPYQCP--QCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       295 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      +||.|.  .|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            566676  6777777777777777776664

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.28  E-value=6e-07  Score=56.47  Aligned_cols=31  Identities=16%  Similarity=0.285  Sum_probs=15.9

Q ss_pred             CCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         292 MDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       292 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      .+++||.|.+|++.|...+.|..|+++|+++
T Consensus         9 ~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            9 REAGILPCGLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCTTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCccCcCCCCCCCccCCHHHHHhhhhhhCCC
Confidence            3445555555555555555555555555543

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.28  E-value=3.4e-07  Score=47.26  Aligned_cols=26  Identities=35%  Similarity=0.626  Sum_probs=12.8

Q ss_pred             eeecCcCccccCChHHHHHHHHHhCC
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVHMD  293 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h~~  293 (345)
                      +|.|+.|++.|...+.|..|+++|++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            2 PLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CccCCCCCCccCChhHHHHHHHHhcC
Confidence            34455555555555555555444443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.27  E-value=6.4e-07  Score=45.38  Aligned_cols=25  Identities=20%  Similarity=0.537  Sum_probs=15.2

Q ss_pred             ceeecCcCccccCChHHHHHHHHHh
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                      +||.|+.|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4566666666666666666666555

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.26  E-value=2.9e-07  Score=54.03  Aligned_cols=31  Identities=26%  Similarity=0.614  Sum_probs=16.4

Q ss_pred             CcCCCCccCC--CCCCCCCCCchhHHHHhhhcC
Q psy8793           2 HQGIKQYQCS--QCPKAFNQKGNLKEHFRIHTG   32 (345)
Q Consensus         2 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~   32 (345)
                      |++++||+|+  .|++.|.....|..|+++|.+
T Consensus        13 H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             cCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            4455555553  455555555555555555544

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.25  E-value=6.3e-07  Score=46.19  Aligned_cols=29  Identities=34%  Similarity=0.698  Sum_probs=25.9

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      +||.|+.|++.|...+.|..|+++|++++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCCC
Confidence            47899999999999999999999998864

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.25  E-value=7.9e-07  Score=47.13  Aligned_cols=29  Identities=31%  Similarity=0.624  Sum_probs=26.0

Q ss_pred             CCCccCC--CCCCCCCCCchhHHHHhhhcCC
Q psy8793           5 IKQYQCS--QCPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         5 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      ++||.|+  .|++.|.....|..|+++|.++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            5789999  8999999999999999999865

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.25  E-value=4.4e-07  Score=46.46  Aligned_cols=25  Identities=28%  Similarity=0.684  Sum_probs=11.7

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhc
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHT  320 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~  320 (345)
                      ||.|..|++.|...+.|..|+++|+
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            3 PYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             SEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             CccCCCCCcccCCHHHHHHHHHhcC
Confidence            4444444444444444444444443

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.56  E-value=1.4e-07  Score=48.93  Aligned_cols=27  Identities=44%  Similarity=0.765  Sum_probs=15.0

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      ||.|..|++.|...+.|..|+++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            2 PCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            455555555555555555555555543

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=6.4e-07  Score=45.81  Aligned_cols=28  Identities=25%  Similarity=0.503  Sum_probs=24.5

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCC
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMD  293 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  293 (345)
                      +++|.|+.|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            3679999999999999999999998864

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.23  E-value=7.4e-07  Score=45.10  Aligned_cols=26  Identities=27%  Similarity=0.585  Sum_probs=15.3

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      ||.|.+|++.|...+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35566666666666666666666554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.22  E-value=5.4e-07  Score=45.72  Aligned_cols=24  Identities=17%  Similarity=0.416  Sum_probs=12.0

Q ss_pred             eeecCcCccccCChHHHHHHHHHh
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                      ||.|+.|++.|...+.|..|+++|
T Consensus         3 ~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            3 PYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             TEEETTTTEEESCHHHHHHHHTTC
T ss_pred             CcCCCCCCcccCCHHHHHHHHHhc
Confidence            455555555555555555554444

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.22  E-value=4.1e-07  Score=46.20  Aligned_cols=27  Identities=33%  Similarity=0.771  Sum_probs=21.5

Q ss_pred             CCCcCCCCCccccCChHHHHHHhhhhc
Q psy8793         294 TRPYQCPQCPMAYKTNISLSAHLMKHT  320 (345)
Q Consensus       294 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  320 (345)
                      ++||.|++|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            367888888888888888888887764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.21  E-value=8.9e-07  Score=45.98  Aligned_cols=30  Identities=30%  Similarity=0.574  Sum_probs=25.9

Q ss_pred             CCccCCCCCCCCCCCchhHHHHhhhcCCCC
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHFRIHTGEKP   35 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~   35 (345)
                      ++|.|++|++.|.....|..|+.+|.++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCCC
Confidence            579999999999999999999999887653

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.21  E-value=5.5e-07  Score=45.64  Aligned_cols=27  Identities=26%  Similarity=0.710  Sum_probs=22.5

Q ss_pred             CCCcCCCCCccccCChHHHHHHhhhhc
Q psy8793         294 TRPYQCPQCPMAYKTNISLSAHLMKHT  320 (345)
Q Consensus       294 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  320 (345)
                      ++||.|..|++.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            367889999999998899988888774

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.20  E-value=9.8e-07  Score=45.40  Aligned_cols=28  Identities=50%  Similarity=0.994  Sum_probs=25.1

Q ss_pred             CCccCCCCCCCCCCCchhHHHHhhhcCC
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      +||.|++|++.|.....|..|+.+|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccC
Confidence            5899999999999999999999998765

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.20  E-value=8.9e-07  Score=46.56  Aligned_cols=29  Identities=34%  Similarity=0.630  Sum_probs=25.1

Q ss_pred             ceeecC--cCccccCChHHHHHHHHHhCCCC
Q psy8793         267 EIFKCT--KCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       267 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            478997  89999999999999999998764

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.50  E-value=1.9e-07  Score=48.76  Aligned_cols=28  Identities=32%  Similarity=0.705  Sum_probs=16.1

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      +||.|..|++.|...+.|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4555666666666666666665555543

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.19  E-value=1.1e-06  Score=45.67  Aligned_cols=28  Identities=29%  Similarity=0.547  Sum_probs=19.6

Q ss_pred             CCcCCCCCccccCChHHHHHH-hhhhcCC
Q psy8793         295 RPYQCPQCPMAYKTNISLSAH-LMKHTGA  322 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  322 (345)
                      +||.|..|++.|...+.|..| +++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            356777777777777777777 5677665

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.47  E-value=2.3e-07  Score=48.06  Aligned_cols=29  Identities=24%  Similarity=0.453  Sum_probs=24.8

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhCCCC
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      +||.|+.|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            47899999999999999999999887753

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.46  E-value=2.5e-07  Score=48.26  Aligned_cols=29  Identities=48%  Similarity=1.024  Sum_probs=22.8

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHhhhcCC
Q psy8793           5 IKQYQCSQCPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      ++||.|+.|++.|.....|..|+.+|.++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            46788888888888888888888877654

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.16  E-value=9.9e-07  Score=44.59  Aligned_cols=26  Identities=38%  Similarity=0.774  Sum_probs=22.0

Q ss_pred             eeecCcCccccCChHHHHHHHHHhCC
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVHMD  293 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h~~  293 (345)
                      ||.|+.|++.|...+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            57899999999999999999888875

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.34  E-value=4.9e-07  Score=45.38  Aligned_cols=24  Identities=29%  Similarity=0.771  Sum_probs=10.9

Q ss_pred             CcCCCCCccccCChHHHHHHhhhh
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h  319 (345)
                      ||.|+.|++.|...+.|..|+++|
T Consensus         2 p~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            2 PYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            344444444444444444444443

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.06  E-value=2.2e-06  Score=44.45  Aligned_cols=28  Identities=39%  Similarity=0.866  Sum_probs=23.4

Q ss_pred             CCccCCCCCCCCCCCchhHHH-HhhhcCC
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEH-FRIHTGE   33 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~~   33 (345)
                      +||.|+.|++.|.....|..| +.+|.++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccCC
Confidence            578899999999988999999 6788765

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.33  E-value=5.3e-07  Score=45.24  Aligned_cols=25  Identities=44%  Similarity=0.849  Sum_probs=17.6

Q ss_pred             CCccCCCCCCCCCCCchhHHHHhhh
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHFRIH   30 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h   30 (345)
                      +||.|++|++.|.....|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            4677777777777777777776665

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.90  E-value=7.5e-06  Score=41.91  Aligned_cols=25  Identities=32%  Similarity=0.844  Sum_probs=14.2

Q ss_pred             eeecC--cCccccCChHHHHHHHHHhC
Q psy8793         268 IFKCT--KCDKVFQHIQLLNRHQLVHM  292 (345)
Q Consensus       268 ~~~C~--~C~~~f~~~~~l~~H~~~h~  292 (345)
                      +|.|.  .|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45555  55555555555555555554

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.87  E-value=5.7e-06  Score=42.40  Aligned_cols=27  Identities=30%  Similarity=0.580  Sum_probs=23.9

Q ss_pred             CCcCCC--CCccccCChHHHHHHhhhhcC
Q psy8793         295 RPYQCP--QCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       295 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      ++|.|.  .|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            468899  999999999999999998874

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.80  E-value=3.8e-05  Score=47.93  Aligned_cols=52  Identities=21%  Similarity=0.467  Sum_probs=31.9

Q ss_pred             cccc--cccccCCHHHHHHHHh-hhcCCC------CccccccccCccccchHhHHHHhhhh
Q psy8793         153 TCEL--CSKGFLSAESYKCHLR-RHKGEK------PVTCTFENCTETFVESWAMRKHVRTC  204 (345)
Q Consensus       153 ~C~~--C~~~f~~~~~l~~H~~-~~~~~~------~~~C~~~~C~~~f~~~~~l~~H~~~~  204 (345)
                      .|.+  |++.|.+...|..|+. .|.+..      +|.|.+..|+..+.....|..|++..
T Consensus         3 ~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            3 KCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             eEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            4444  6777777777777763 454443      56666666666666666666666543

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.72  E-value=4.8e-05  Score=47.47  Aligned_cols=46  Identities=22%  Similarity=0.428  Sum_probs=29.4

Q ss_pred             CccccCChHHHHHHH-HHhCCCC------CcCCC--CCccccCChHHHHHHhhhh
Q psy8793         274 CDKVFQHIQLLNRHQ-LVHMDTR------PYQCP--QCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       274 C~~~f~~~~~l~~H~-~~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h  319 (345)
                      |++.|.+...|..|+ +.|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            667777777777776 3565444      56664  6666666666666666643

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=97.27  E-value=2.2e-05  Score=56.59  Aligned_cols=74  Identities=19%  Similarity=0.298  Sum_probs=36.2

Q ss_pred             ceeecCcCccccCChHHHHHHH--HHhCCC-CCcCCC------CCccccCChHHHHHHhhhhcCCCccccccchhhcccc
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQ--LVHMDT-RPYQCP------QCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHR  337 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~--~~h~~~-~~~~C~------~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  337 (345)
                      +++.|.+|+..|.+.+.+..|.  +.|... +.+.+.      .=+..+....    +...+.+...|.|..|++.|...
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFSSP  106 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECSSH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeCCH
Confidence            4466666666666666666666  334221 111110      0011221111    12234445556677777777777


Q ss_pred             chhhhcc
Q psy8793         338 SSLISHY  344 (345)
Q Consensus       338 ~~l~~H~  344 (345)
                      ..|..|+
T Consensus       107 ~~~~~H~  113 (127)
T 1zu1_A          107 VVAESHY  113 (127)
T ss_dssp             HHHHHHH
T ss_pred             HHHHHHH
Confidence            7666665

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.94  E-value=0.00014  Score=51.22  Aligned_cols=33  Identities=15%  Similarity=0.240  Sum_probs=26.9

Q ss_pred             HhhhcCCCCccCCcCCccccchhhhcccccccc
Q psy8793          27 FRIHTGEKPFTCNICSRKFTTYSQVRRSSNTSA   59 (345)
Q Consensus        27 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~   59 (345)
                      -..|++.++|.|..|++.|.+...|..|+++..
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK~   74 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSKD   74 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCHH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhhh
Confidence            345888888999999999999999988887743

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.91  E-value=0.00014  Score=51.20  Aligned_cols=28  Identities=21%  Similarity=0.502  Sum_probs=16.4

Q ss_pred             hhcCCCccccccchhhccccchhhhccC
Q psy8793         318 KHTGAKPYVCEICNKVLTHRSSLISHYR  345 (345)
Q Consensus       318 ~h~~~~~~~C~~C~~~f~~~~~l~~H~r  345 (345)
                      .|+|++||.|..|++.|.+...|..|+|
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~r   71 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFR   71 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTT
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHh
Confidence            4555556666666666666666665554

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.89  E-value=0.00055  Score=52.28  Aligned_cols=145  Identities=17%  Similarity=0.297  Sum_probs=89.0

Q ss_pred             cccccccccccCCHHHHHHHHhhhcCCCCccccccccCccccchHhHHHHhhhhcCCCCCCccccCCCcccccChhhHHH
Q psy8793         151 PHTCELCSKGFLSAESYKCHLRRHKGEKPVTCTFENCTETFVESWAMRKHVRTCHNKPTVNRFPCDKCEKVYSCASSLTK  230 (345)
Q Consensus       151 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~  230 (345)
                      .+.|++|...|..               |+.+   .||-.|=..- +...+..       ....|+.|...+.....+..
T Consensus        18 ~~~C~IC~~~~~~---------------pv~~---~CgH~fC~~C-i~~~~~~-------~~~~CP~Cr~~~~~~~~~~~   71 (170)
T 3hcs_A           18 KYECPICLMALRE---------------AVQT---PCGHRFCKAC-IIKSIRD-------AGHKCPVDNEILLENQLFPD   71 (170)
T ss_dssp             GGBCTTTCSBCSS---------------EEEC---TTSCEEEHHH-HHHHHHH-------HCSBCTTTCCBCCGGGCEEC
T ss_pred             CCCCCCCChhhcC---------------cEEC---CCCCHHHHHH-HHHHHHh-------CCCCCCCCccCcchhhhhhh
Confidence            4889999888753               2332   2555554321 2222221       11378888877764311100


Q ss_pred             -HHHHhcCCCCccC--ccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccC
Q psy8793         231 -HMKARLGRQPVSC--DICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYK  307 (345)
Q Consensus       231 -H~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  307 (345)
                       -+..........|  ..|+..+ ....+..|.. .=.-.+..|+.|++.+ ....|..|+...-..++-.|+.|+..+.
T Consensus        72 ~~~~~~i~~l~v~C~n~GC~~~~-~~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~  148 (170)
T 3hcs_A           72 NFAKREILSLMVKCPNEGCLHKM-ELRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA  148 (170)
T ss_dssp             HHHHHHHHTSEEECCSTTCCCEE-EGGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE
T ss_pred             HHHHHHHhhcccCCCCCCCCcee-cHhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC
Confidence             0111112334567  4677665 3567788863 3345678899999988 5677999988877888888999998874


Q ss_pred             ChHHHHHHhhhhcCCCcc
Q psy8793         308 TNISLSAHLMKHTGAKPY  325 (345)
Q Consensus       308 ~~~~l~~H~~~h~~~~~~  325 (345)
                       ...|..|..++.|+.++
T Consensus       149 -~~~l~~H~~~~~~~~~~  165 (170)
T 3hcs_A          149 -FEDKEIHDQNCPLALEH  165 (170)
T ss_dssp             -GGGHHHHHTTCCC----
T ss_pred             -HHHHHhHHHhCcChhhh
Confidence             57889999998887654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.81  E-value=0.0011  Score=36.97  Aligned_cols=23  Identities=22%  Similarity=0.521  Sum_probs=20.2

Q ss_pred             CCccCCCCCCCCCCCchhHHHHh
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHFR   28 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~   28 (345)
                      .+|.|+.|+..|.....|+.||+
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            78889999999988888888887

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.64  E-value=0.00056  Score=49.18  Aligned_cols=52  Identities=17%  Similarity=0.422  Sum_probs=43.8

Q ss_pred             CCccCCCCCCCCCCCchhHHHH--hhhc-------------------------------CCCCccCCcCCccccchhhhc
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHF--RIHT-------------------------------GEKPFTCNICSRKFTTYSQVR   52 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~--~~h~-------------------------------~~~~~~C~~C~~~f~~~~~l~   52 (345)
                      +++.|.+|+..|.+...+..|.  +.|.                               ....|.|.+|+..|++...+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            5688999999999999999998  3341                               234588999999999999999


Q ss_pred             ccccc
Q psy8793          53 RSSNT   57 (345)
Q Consensus        53 ~H~~~   57 (345)
                      .|+..
T Consensus       111 ~H~~g  115 (127)
T 1zu1_A          111 SHYIG  115 (127)
T ss_dssp             HHHTS
T ss_pred             HHHCC
Confidence            99975

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=96.47  E-value=0.02  Score=43.43  Aligned_cols=80  Identities=14%  Similarity=0.241  Sum_probs=57.4

Q ss_pred             ccc--CCCcccccChhhHHHHHHHhcCCCCccCccccccCCChhHHHHHhhhhcCCceeecCcCccccCChHHHHHHHHH
Q psy8793         213 FPC--DKCEKVYSCASSLTKHMKARLGRQPVSCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       213 ~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      ..|  ..|+..+. ...+..|.. .-.-.++.|+.|+..+ .+..|..|....-..++..|+.|+..+. ...|..|..+
T Consensus        83 v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~-~~~l~~H~~~  158 (170)
T 3hcs_A           83 VKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMA-FEDKEIHDQN  158 (170)
T ss_dssp             EECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEE-GGGHHHHHTT
T ss_pred             cCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccC-HHHHHhHHHh
Confidence            566  46777665 557777763 3344567888888877 5778888988777788889999998884 5668899888


Q ss_pred             hCCCCC
Q psy8793         291 HMDTRP  296 (345)
Q Consensus       291 h~~~~~  296 (345)
                      +.|..+
T Consensus       159 ~~~~~~  164 (170)
T 3hcs_A          159 CPLALE  164 (170)
T ss_dssp             CCC---
T ss_pred             CcChhh
Confidence            877654

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.43  E-value=0.016  Score=32.46  Aligned_cols=22  Identities=23%  Similarity=0.671  Sum_probs=12.7

Q ss_pred             CcCCCCCccccCChHHHHHHhh
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLM  317 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~  317 (345)
                      +|.|+.|+..|.....|+.||+
T Consensus        12 ~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           12 RKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             CCCCTTTCCCCSSHHHHHHHHH
T ss_pred             ceeCCcccccccchHHHHhhhh
Confidence            4555555555555555555555

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.94  E-value=0.029  Score=29.31  Aligned_cols=24  Identities=29%  Similarity=0.433  Sum_probs=20.3

Q ss_pred             ceeecCcCccccCChHHHHHHHHH
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      +.|.||+|.+.|.+...|..|...
T Consensus         4 EGFiCP~C~~~l~s~~~L~~Hye~   27 (34)
T 3mjh_B            4 EGFICPQCMKSLGSADELFKHYEA   27 (34)
T ss_dssp             EEEECTTTCCEESSHHHHHHHHHH
T ss_pred             cccCCcHHHHHcCCHHHHHHHHHh
Confidence            358899999999999999999765

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=92.42  E-value=0.049  Score=34.50  Aligned_cols=48  Identities=15%  Similarity=0.396  Sum_probs=39.0

Q ss_pred             CccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhccccc
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSN   56 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   56 (345)
                      .|.|..|+.+.. +..|..|+..-.+...|.|..|++.|.. ...+.|..
T Consensus        10 ~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~Hts   57 (79)
T 1wjv_A           10 FFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSHVK   57 (79)
T ss_dssp             EEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTCCC
T ss_pred             EEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCEee
Confidence            389999999886 5799999877666567999999999974 66777753

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=92.33  E-value=0.25  Score=28.42  Aligned_cols=45  Identities=29%  Similarity=0.533  Sum_probs=26.0

Q ss_pred             cCccccccCCChhHHHHHhhhhcCCceeecCcCccc-cCChHHHHHHHH
Q psy8793         242 SCDICHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKV-FQHIQLLNRHQL  289 (345)
Q Consensus       242 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~-f~~~~~l~~H~~  289 (345)
                      .|.+|.....+...|..|...-..+   +||+|-.- ..++++|+.|.+
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHH
Confidence            4666666666666666666655554   55555432 345566666654

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=91.63  E-value=0.057  Score=34.19  Aligned_cols=47  Identities=15%  Similarity=0.355  Sum_probs=32.2

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHH
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAH  315 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  315 (345)
                      -.|.|..||..+. +..|..|...-.+...|-|-+|++.|.. ...+.|
T Consensus         9 V~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A            9 VFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             CEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             eEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            3578888887774 5557888666666566888888888864 444444

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=90.60  E-value=0.1  Score=29.12  Aligned_cols=11  Identities=45%  Similarity=1.147  Sum_probs=5.0

Q ss_pred             eecCcCccccC
Q psy8793         269 FKCTKCDKVFQ  279 (345)
Q Consensus       269 ~~C~~C~~~f~  279 (345)
                      |.|..||..|.
T Consensus         4 Y~C~rCg~~fs   14 (48)
T 4ayb_P            4 YRCGKCWKTFT   14 (48)
T ss_dssp             -CCCCTTTTCC
T ss_pred             EEeeccCCCcc
Confidence            44555555553

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=90.17  E-value=0.23  Score=31.69  Aligned_cols=50  Identities=16%  Similarity=0.517  Sum_probs=39.9

Q ss_pred             CCccC-CCCCCCCCCCchhHHHHhhhcCCCCccCCcCCccccchhhhcccccc
Q psy8793           6 KQYQC-SQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRRSSNT   57 (345)
Q Consensus         6 ~~~~C-~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   57 (345)
                      .+..| ..|+..+. +..|..|+...-..++..|.+|+..+. ...|..|...
T Consensus        15 ~~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~-~~~l~~H~~~   65 (76)
T 2yuc_A           15 NVIPCPNRCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFS-GEAYESHEGM   65 (76)
T ss_dssp             SCCBCTTCCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCC-HHHHHHTTTS
T ss_pred             cccCCCccccHHhh-HhHHHhhCHhhCCCcceECCCCCCccC-HHHHHHHHhH
Confidence            45678 58998886 479999988777778899999999885 5667888754

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=89.93  E-value=0.25  Score=25.79  Aligned_cols=27  Identities=22%  Similarity=0.301  Sum_probs=23.4

Q ss_pred             cccccccccccCCHHHHHHHHhhhcCC
Q psy8793         151 PHTCELCSKGFLSAESYKCHLRRHKGE  177 (345)
Q Consensus       151 ~~~C~~C~~~f~~~~~l~~H~~~~~~~  177 (345)
                      .|.||.|-+.|.+...|..|....|..
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~~   31 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHDA   31 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTSS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcccc
Confidence            489999999999999999999876543

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=89.57  E-value=0.13  Score=29.04  Aligned_cols=37  Identities=14%  Similarity=0.489  Sum_probs=21.7

Q ss_pred             CCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCcc
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRK   44 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   44 (345)
                      +.|+|.+|+..|.....-.  .........|.|++|+..
T Consensus         3 ~~y~C~vCGyvyd~~~Gd~--t~f~~lP~dw~CP~Cg~~   39 (46)
T 6rxn_A            3 QKYVCNVCGYEYDPAEHDN--VPFDQLPDDWCCPVCGVS   39 (46)
T ss_dssp             CCEEETTTCCEECGGGGTT--CCGGGSCTTCBCTTTCCB
T ss_pred             CEEECCCCCeEEeCCcCCC--cchhhCCCCCcCcCCCCc
Confidence            4689999999997321111  000111123899999863

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=87.62  E-value=0.073  Score=33.46  Aligned_cols=10  Identities=50%  Similarity=1.265  Sum_probs=5.3

Q ss_pred             eecCcCcccc
Q psy8793         269 FKCTKCDKVF  278 (345)
Q Consensus       269 ~~C~~C~~~f  278 (345)
                      |+||.||..|
T Consensus        52 FkCP~CgEEF   61 (95)
T 2k5c_A           52 FKCPVCGEEF   61 (95)
T ss_dssp             EECTTTCCEE
T ss_pred             hcCCCccHHH
Confidence            5555555554

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=86.77  E-value=0.58  Score=27.00  Aligned_cols=22  Identities=14%  Similarity=0.501  Sum_probs=16.6

Q ss_pred             ccCCCCCCCCCCCchhHHHHhh
Q psy8793           8 YQCSQCPKAFNQKGNLKEHFRI   29 (345)
Q Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~   29 (345)
                      =.|.+|+..|..+..|+.|+.+
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs   35 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFS   35 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccccccCcccccccchhhhhcc
Confidence            4788888888888888887653

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=86.17  E-value=0.71  Score=23.20  Aligned_cols=22  Identities=23%  Similarity=0.478  Sum_probs=18.3

Q ss_pred             ecCcCccccCChHHHHHHHHHh
Q psy8793         270 KCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       270 ~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                      .|.+|.+.|..-.+|..|++.-
T Consensus        11 hcrfckkkysdvknlikhire~   32 (37)
T 2elu_A           11 HCRFCKKKYSDVKNLIKHIRDA   32 (37)
T ss_dssp             EETTTTEECSSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHh
Confidence            6888888888888888888763

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=85.59  E-value=0.24  Score=24.57  Aligned_cols=22  Identities=18%  Similarity=0.457  Sum_probs=17.4

Q ss_pred             CccCCCCCCCCCCCchhHHHHh
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFR   28 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~   28 (345)
                      .|+|++|.....+...|..|..
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e   24 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVM   24 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHH
Confidence            4788888888888888888854

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=84.83  E-value=1.7  Score=25.00  Aligned_cols=46  Identities=26%  Similarity=0.509  Sum_probs=34.5

Q ss_pred             ecCcCccccCChHHHHHHHHHhCCCCCcCCCCCc-cccCChHHHHHHhhh
Q psy8793         270 KCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCP-MAYKTNISLSAHLMK  318 (345)
Q Consensus       270 ~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~-~~f~~~~~l~~H~~~  318 (345)
                      .|.+|....-+...|..|...-...   +||+|- ..-.+.+.|+.|.++
T Consensus         5 vC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfkv   51 (57)
T 2k9h_A            5 VCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYSI   51 (57)
T ss_dssp             BCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHTT
T ss_pred             hhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHHH
Confidence            5888888888888899998876443   488886 345678888888653

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=84.03  E-value=0.39  Score=32.05  Aligned_cols=53  Identities=17%  Similarity=0.322  Sum_probs=39.8

Q ss_pred             CCccCCCCCCCCCCCchhHHHHhhhcCCCCccCC---cCCccccchhhhcccccccccccccc
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCN---ICSRKFTTYSQVRRSSNTSARNVLKL   65 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~---~C~~~f~~~~~l~~H~~~~~~~~~~~   65 (345)
                      +.-.|+.|+..+.+...   +    ..+..|.|+   -|.++|-+..+|..|.+..|....+.
T Consensus        36 ~~k~Cp~C~~~V~rVe~---~----~~~~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~~~~   91 (101)
T 3vk6_A           36 GDKMCPGCSDPVQRIEQ---C----TRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRAGKP   91 (101)
T ss_dssp             TCCBCTTTCCBCSEEEE---E----EGGGCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTSCCC
T ss_pred             cCCCCcCcCCeeeeeEE---e----ccCCEEECCCCCCHHHHhcCHHHHHHHHHHHhhhcCCC
Confidence            44579999999876432   2    335569999   49999999999999998877554433

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=83.76  E-value=0.73  Score=23.16  Aligned_cols=23  Identities=22%  Similarity=0.431  Sum_probs=20.2

Q ss_pred             cCCCCCccccCChHHHHHHhhhh
Q psy8793         297 YQCPQCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~~h  319 (345)
                      ..|..|.+.+++..+|..|++.-
T Consensus        10 qhcrfckkkysdvknlikhire~   32 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDA   32 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHT
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHh
Confidence            45999999999999999999843

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=83.65  E-value=0.19  Score=32.00  Aligned_cols=42  Identities=17%  Similarity=0.325  Sum_probs=17.4

Q ss_pred             cCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHh
Q psy8793         273 KCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHL  316 (345)
Q Consensus       273 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  316 (345)
                      .|+..+. ...|..|+...-..++..|++|+..|. ...|..|.
T Consensus        22 ~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~-~~~l~~H~   63 (76)
T 2yuc_A           22 RCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFS-GEAYESHE   63 (76)
T ss_dssp             CCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCC-HHHHHHTT
T ss_pred             cccHHhh-HhHHHhhCHhhCCCcceECCCCCCccC-HHHHHHHH
Confidence            3444442 223444433333334444555555443 23344443

>4rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.20A {Clostridium pasteurianum} SCOP: g.41.5.1 PDB: 5rxn_A 1bfy_A 1fhh_A 1fhm_A 1irn_A 1iro_A 1r0f_A 1r0g_A 1r0h_A 1r0i_A 1r0j_A 1t9q_A 1c09_A 1b2j_A 1b13_A 1smm_A 1smu_A 1smw_A 1be7_A 1t9o_A ...

Probab=81.05  E-value=0.63  Score=27.27  Aligned_cols=39  Identities=15%  Similarity=0.508  Sum_probs=22.9

Q ss_pred             CCccCCCCCCCCCCCchhHHH-Hh--h--hcCCCCccCCcCCcc
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEH-FR--I--HTGEKPFTCNICSRK   44 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H-~~--~--h~~~~~~~C~~C~~~   44 (345)
                      +.|.|.+|+..|.....-... +.  +  ..-...|.|++|+..
T Consensus         2 ~~y~C~vCGyvYd~~~Gdp~~gi~pGt~fe~lP~dw~CP~Cg~~   45 (54)
T 4rxn_A            2 KKYTCTVCGYIYDPEDGDPDDGVNPGTDFKDIPDDWVCPLCGVG   45 (54)
T ss_dssp             CCEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred             CceECCCCCeEECCCcCCcccCcCCCCChhHCCCCCcCcCCCCc
Confidence            468999999999753222111 11  0  111123899999864

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=80.98  E-value=0.54  Score=30.53  Aligned_cols=25  Identities=36%  Similarity=0.704  Sum_probs=13.9

Q ss_pred             cCCCCCccccCChHHHHHHhhhhcCCCc
Q psy8793         297 YQCPQCPMAYKTNISLSAHLMKHTGAKP  324 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~  324 (345)
                      ..|.+||+.|.   .|.+|+..++|..|
T Consensus        22 iiClecGK~fK---~LkRHL~~~hgltp   46 (87)
T 2jsp_A           22 IVCLECGGSFK---SLKRHLTTHHSMTP   46 (87)
T ss_dssp             EECTBTCCEES---BHHHHHHHTTCSCH
T ss_pred             eEecccchhhH---HHHHHHHHccCCCH
Confidence            35666666554   35566666555544

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=80.58  E-value=1  Score=30.39  Aligned_cols=11  Identities=36%  Similarity=0.812  Sum_probs=6.1

Q ss_pred             CccCCCCCCCC
Q psy8793           7 QYQCSQCPKAF   17 (345)
Q Consensus         7 ~~~C~~C~~~f   17 (345)
                      ||+|..||+.|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            45555555555

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=80.56  E-value=1.1  Score=29.02  Aligned_cols=27  Identities=26%  Similarity=0.596  Sum_probs=20.6

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCCC
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      +....|-+||+.|..   |.+|+..++|..
T Consensus        19 ~d~iiClecGK~fK~---LkRHL~~~hglt   45 (87)
T 2jsp_A           19 DDHIVCLECGGSFKS---LKRHLTTHHSMT   45 (87)
T ss_dssp             SSCEECTBTCCEESB---HHHHHHHTTCSC
T ss_pred             CCceEecccchhhHH---HHHHHHHccCCC
Confidence            344789999999985   779999876644

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=80.35  E-value=0.7  Score=26.68  Aligned_cols=22  Identities=23%  Similarity=0.702  Sum_probs=18.8

Q ss_pred             cCCCCCccccCChHHHHHHhhh
Q psy8793         297 YQCPQCPMAYKTNISLSAHLMK  318 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~~  318 (345)
                      -.|.+|+..|+....|+-|+++
T Consensus        14 ~eC~lC~vkYs~r~slqDHIFs   35 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIFS   35 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHTS
T ss_pred             ccccccCcccccccchhhhhcc
Confidence            4799999999999999988874

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=80.24  E-value=0.7  Score=31.15  Aligned_cols=11  Identities=45%  Similarity=0.902  Sum_probs=5.4

Q ss_pred             eeecCcCcccc
Q psy8793         268 IFKCTKCDKVF  278 (345)
Q Consensus       268 ~~~C~~C~~~f  278 (345)
                      ||+|..||..|
T Consensus        67 p~~C~~CG~~F   77 (105)
T 2gmg_A           67 PAQCRKCGFVF   77 (105)
T ss_dssp             CCBBTTTCCBC
T ss_pred             CcChhhCcCee
Confidence            34455555554

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	345
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-09
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	0.004
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-05
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-08
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	8e-08
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	8e-07
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	4e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	0.002
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	8e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d1x6ea2	26	g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (	1e-05
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	2e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	9e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	6e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	8e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.001
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	1e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	5e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	0.001
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	5e-04
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.003
d1ubdc2	28	g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger	0.004

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.1 bits (123), Expect = 1e-09
 Identities = 13/36 (36%), Positives = 20/36 (55%), Gaps = 1/36 (2%)

Query: 6  KQYQCSQCPKAFNQKGNLKEHFR-IHTGEKPFTCNI 40
          K Y C  C K F++  +L  H + +HT E+P  C +
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 3e-05
 Identities = 10/36 (27%), Positives = 19/36 (52%), Gaps = 1/36 (2%)

Query: 295 RPYQCPQCPMAYKTNISLSAHLMK-HTGAKPYVCEI 329
           +PY C  C   +     L+ H+ + HT  +P+ C++
Sbjct: 4   KPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.1 bits (89), Expect = 4e-05
 Identities = 12/37 (32%), Positives = 20/37 (54%), Gaps = 1/37 (2%)

Query: 147 TGEKPHTCELCSKGFLSAESYKCHLRR-HKGEKPVTC 182
           +  KP+ C+ C KGF   +    H+++ H  E+P  C
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (74), Expect = 0.004
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 320 TGAKPYVCEICNKVLTHRSSLISHYR 345
           +  KPY+C+ C K  +    L  H +
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIK 26

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.0 bits (115), Expect = 1e-08
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE 33
          H G K Y C +C KAF++   L +H R+HTGE
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (95), Expect = 6e-06
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGE 177
           H+GEKP+ C  C K F  +     H R H GE
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (87), Expect = 6e-05
 Identities = 12/27 (44%), Positives = 15/27 (55%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
           H+G KPY C  C K  +  S L+ H R
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQR 28

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.3 bits (82), Expect = 4e-04
 Identities = 10/25 (40%), Positives = 16/25 (64%)

Query: 29 IHTGEKPFTCNICSRKFTTYSQVRR 53
          IH+GEKP+ C  C + F+  S + +
Sbjct: 1  IHSGEKPYGCVECGKAFSRSSILVQ 25

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 47.2 bits (113), Expect = 2e-08
 Identities = 12/29 (41%), Positives = 19/29 (65%)

Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTGEK 34
          + + C  C +AF ++ +LK H+R HT EK
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (109), Expect = 8e-08
 Identities = 12/33 (36%), Positives = 21/33 (63%), Gaps = 2/33 (6%)

Query: 8  YQCSQ--CPKAFNQKGNLKEHFRIHTGEKPFTC 38
          + C +  C K+FN K +LKEH ++H+  + + C
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.9 bits (104), Expect = 3e-07
 Identities = 10/29 (34%), Positives = 18/29 (62%)

Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTGEK 34
          K++ C +CPK F +  +L +H + H  +K
Sbjct: 1  KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.5 bits (103), Expect = 4e-07
 Identities = 14/33 (42%), Positives = 16/33 (48%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEK 34
          H G K Y CS C K F QK  L  HF+ +    
Sbjct: 3  HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.0 bits (86), Expect = 8e-05
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 144 KRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGEK 178
           + HTGEKP+ C  C K F   +    H +R+    
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.8 bits (83), Expect = 3e-04
 Identities = 11/27 (40%), Positives = 15/27 (55%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
           HTG KPY C  C+K    +  L  H++
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFK 29

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.0 bits (81), Expect = 4e-04
 Identities = 10/26 (38%), Positives = 14/26 (53%)

Query: 28 RIHTGEKPFTCNICSRKFTTYSQVRR 53
          R HTGEKP+ C+ C + F     +  
Sbjct: 1  RTHTGEKPYACSHCDKTFRQKQLLDM 26

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.6 bits (101), Expect = 8e-07
 Identities = 11/27 (40%), Positives = 16/27 (59%)

Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTG 32
          K +QC  C + F++  +L  H R HTG
Sbjct: 2  KPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 2e-06
 Identities = 12/31 (38%), Positives = 17/31 (54%), Gaps = 2/31 (6%)

Query: 6  KQYQCS--QCPKAFNQKGNLKEHFRIHTGEK 34
          + + C+   C K F +   L+ H R HTGEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 4e-06
 Identities = 13/30 (43%), Positives = 20/30 (66%), Gaps = 2/30 (6%)

Query: 6  KQYQCSQ--CPKAFNQKGNLKEHFRIHTGE 33
          K ++C+   C K++++  NLK H R HTGE
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.7 bits (96), Expect = 4e-06
 Identities = 13/33 (39%), Positives = 16/33 (48%), Gaps = 1/33 (3%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHF-RIHTGE 33
          H G K Y+C  C   F Q G +K H  + HT  
Sbjct: 3  HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 6e-05
 Identities = 11/33 (33%), Positives = 18/33 (54%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGEK 178
           H+GEKP+ C +C   F  + + K H+ +   E 
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.3 bits (87), Expect = 8e-05
 Identities = 11/26 (42%), Positives = 16/26 (61%)

Query: 28 RIHTGEKPFTCNICSRKFTTYSQVRR 53
          R H+GEKP+ C IC  +FT    ++ 
Sbjct: 1  RTHSGEKPYECYICHARFTQSGTMKM 26

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.1 bits (84), Expect = 2e-04
 Identities = 10/27 (37%), Positives = 14/27 (51%)

Query: 319 HTGAKPYVCEICNKVLTHRSSLISHYR 345
           H+G KPY C IC+   T   ++  H  
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHIL 29

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.1 bits (94), Expect = 7e-06
 Identities = 10/32 (31%), Positives = 14/32 (43%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE 33
            G + + C  C  AF  K N   H ++HT  
Sbjct: 2  SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 8/32 (25%), Positives = 15/32 (46%)

Query: 146 HTGEKPHTCELCSKGFLSAESYKCHLRRHKGE 177
            +G++P  C +C   F +  +   HL+ H   
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.1 bits (94), Expect = 8e-06
 Identities = 12/32 (37%), Positives = 21/32 (65%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE 33
           +  ++Y+C +C K+F+   +L +H R HTGE
Sbjct: 7  QRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (85), Expect = 1e-04
 Identities = 9/36 (25%), Positives = 14/36 (38%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRHKGE 177
              +    + + C+ C K F  +     H R H GE
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 2e-04
 Identities = 11/36 (30%), Positives = 18/36 (50%)

Query: 286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTG 321
           R +    + R Y+C +C  ++  +  LS H   HTG
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (77), Expect = 0.002
 Identities = 9/31 (29%), Positives = 13/31 (41%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
              +    + Y C+ C K  +H S L  H R
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRR 33

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.002
 Identities = 4/28 (14%), Positives = 11/28 (39%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
                  + + C+ C + F+  S + +
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSK 30

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 26

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.1 bits (92), Expect = 1e-05
 Identities = 14/26 (53%), Positives = 17/26 (65%)

Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHT 31
          K Y+C +C KAF+Q   L  H RIHT
Sbjct: 1  KPYKCLECGKAFSQNSGLINHQRIHT 26

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 2e-05
 Identities = 14/30 (46%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 6  KQYQCSQ--CPKAFNQKGNLKEHFRIHTGE 33
          K +QC+   C K F+   NL+ H RIHTG+
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.0 bits (86), Expect = 9e-05
 Identities = 10/31 (32%), Positives = 17/31 (54%)

Query: 2  HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTG 32
            GIK +QC  C ++F++  +L  H + H  
Sbjct: 6  STGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.7 bits (80), Expect = 6e-04
 Identities = 10/28 (35%), Positives = 12/28 (42%)

Query: 26 HFRIHTGEKPFTCNICSRKFTTYSQVRR 53
            R  TG KPF C  C R F+    +  
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLAL 29

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 34.3 bits (79), Expect = 8e-04
 Identities = 10/33 (30%), Positives = 15/33 (45%)

Query: 142 HLKRHTGEKPHTCELCSKGFLSAESYKCHLRRH 174
             +  TG KP  C  C + F  ++    H +RH
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.9 bits (78), Expect = 0.001
 Identities = 8/31 (25%), Positives = 13/31 (41%)

Query: 315 HLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
                TG KP+ C  C++  +    L  H +
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.5 bits (85), Expect = 1e-04
 Identities = 11/29 (37%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 6  KQYQCSQ--CPKAFNQKGNLKEHFRIHTG 32
          + Y C    C + F++  +L  H RIHTG
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.6 bits (84), Expect = 2e-04
 Identities = 16/48 (33%), Positives = 23/48 (47%), Gaps = 1/48 (2%)

Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRKFTTYSQVRR 53
          K Y C QC K+F  K     H  +H G +P+ C +C +KF     +  
Sbjct: 2  KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVG 48

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 5e-04
 Identities = 14/46 (30%), Positives = 17/46 (36%)

Query: 246 CHKEFTHPSSVLYHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVH 291
           C K FTH S    H         + C  C K F+    L  H  +H
Sbjct: 8   CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 9e-04
 Identities = 14/51 (27%), Positives = 23/51 (45%), Gaps = 1/51 (1%)

Query: 295 RPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR 345
           + Y C QC  ++        H+  H G +PY C +C K    +  L+ H +
Sbjct: 2   KLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (78), Expect = 0.001
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 269 FKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKH 319
           + C +C K F H    +RH  +H+  RPY C  C   +K    L  H+  H
Sbjct: 4   YPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 35.0 bits (81), Expect = 5e-04
 Identities = 9/30 (30%), Positives = 14/30 (46%), Gaps = 2/30 (6%)

Query: 6  KQYQCSQ--CPKAFNQKGNLKEHFRIHTGE 33
          + Y C    C KAF +  +L  H + H  +
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.4 bits (76), Expect = 0.002
 Identities = 7/35 (20%), Positives = 16/35 (45%), Gaps = 2/35 (5%)

Query: 2  HQGIKQYQCSQCP--KAFNQKGNLKEHFRIHTGEK 34
              K ++C      K F ++ N++ H + H  ++
Sbjct: 13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 33.0 bits (75), Expect = 0.003
 Identities = 6/43 (13%), Positives = 14/43 (32%), Gaps = 2/43 (4%)

Query: 138 GHKLHLKRHTGEKPHTCELCSKG--FLSAESYKCHLRRHKGEK 178
           G      +   +K   C        F    + + H++ H  ++
Sbjct: 5   GSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (73), Expect = 0.004
 Identities = 12/28 (42%), Positives = 18/28 (64%)

Query: 6  KQYQCSQCPKAFNQKGNLKEHFRIHTGE 33
          + + C++C KAF +   LK H  +HTGE
Sbjct: 1  RVHVCAECGKAFVESSKLKRHQLVHTGE 28

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	345
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.68
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.67
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.36
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.32
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.28
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.27
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.26
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.21
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.2
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.2
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.2
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.17
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.15
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.15
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.14
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.13
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.11
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.09
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.09
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.06
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.06
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.02
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.01
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.0
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.98
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.9
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.88
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.88
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.88
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.8
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.8
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.78
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.77
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.69
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.64
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.58
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.57
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.56
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.52
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.52
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.44
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.35
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.34
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.31
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.2
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.2
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.17
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.13
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.12
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	98.04
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.0
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.97
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.96
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.93
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.88
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.8
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.78
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.75
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.74
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.68
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.66
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.65
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.64
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.64
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.57
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.55
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.54
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.53
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.48
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.32
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.14
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.08
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.06
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.06
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.97
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.95
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.95
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	96.93
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.89
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	96.82
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.8
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.78
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.76
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.68
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.67
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.65
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.61
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.55
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.54
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	96.44
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.26
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.07
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.05
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.81
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.72
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.7
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.41
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.18
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	95.02
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.82
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.79
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	94.4
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.38
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.9
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.53
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	93.42
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	93.34
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	92.96
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	92.88
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.84
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	91.6
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	91.47
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	90.95
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	90.74
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	90.26
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	89.42
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.29
d6rxna_	45	Rubredoxin {Desulfovibrio desulfuricans, strain 27	89.12
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	88.81
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	87.15
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	86.56
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	86.39
d2yrka1	48	Zinc finger homeobox protein 4, ZFHX4 {Human (Homo	85.96
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	85.85
d1iroa_	53	Rubredoxin {Clostridium pasteurianum [TaxId: 1501]	84.68
d1s24a_	56	Two-iron rubredoxin {Pseudomonas oleovorans [TaxId	82.47
d1m36a_	33	Monocytic leukemia zinc finger protein Moz {Human	82.3

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.68  E-value=1.5e-17  Score=99.68  Aligned_cols=53  Identities=32%  Similarity=0.756  Sum_probs=37.5

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccccCChHHHHHHhhhh
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  319 (345)
                      ++||.| .||+.|...+.|..|+++|++++||.|.+||++|...+.|..|+++|
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            456777 37777777777777777777777777777777777777777776665

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.67  E-value=6.9e-18  Score=101.17  Aligned_cols=51  Identities=27%  Similarity=0.724  Sum_probs=49.3

Q ss_pred             CCCcCCCCCccccCChHHHHHHhhhhcCCCccccccchhhccccchhhhccC
Q psy8793         294 TRPYQCPQCPMAYKTNISLSAHLMKHTGAKPYVCEICNKVLTHRSSLISHYR  345 (345)
Q Consensus       294 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~r  345 (345)
                      ++||.| .||++|...+.|..|+++|+|++||.|.+|+++|.+.++|..|||
T Consensus         1 EK~y~C-~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r   51 (53)
T d2csha1           1 DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   51 (53)
T ss_dssp             CCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             CcCCCC-CCCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHh
Confidence            589999 599999999999999999999999999999999999999999986

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.36  E-value=1.6e-13  Score=74.16  Aligned_cols=35  Identities=29%  Similarity=0.717  Sum_probs=22.9

Q ss_pred             CCCcCCCCCccccCChHHHHHHhh-hhcCCCccccc
Q psy8793         294 TRPYQCPQCPMAYKTNISLSAHLM-KHTGAKPYVCE  328 (345)
Q Consensus       294 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  328 (345)
                      ++||.|.+||++|...++|..|++ +|+|++||+|.
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~   38 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ   38 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCc
Confidence            466666666666666666666654 56666666665

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.32  E-value=1.3e-13  Score=74.85  Aligned_cols=37  Identities=30%  Similarity=0.620  Sum_probs=30.0

Q ss_pred             HHHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         286 RHQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       286 ~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      +|+++|++++||.|++||++|...++|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            4677788888888888888888888888888888875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.28  E-value=1.4e-12  Score=70.43  Aligned_cols=37  Identities=32%  Similarity=0.600  Sum_probs=34.0

Q ss_pred             CCceeecCcCccccCChHHHHHHHH-HhCCCCCcCCCC
Q psy8793         265 NNEIFKCTKCDKVFQHIQLLNRHQL-VHMDTRPYQCPQ  301 (345)
Q Consensus       265 ~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  301 (345)
                      .++||.|.+||+.|...+.|..|++ +|++++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4789999999999999999999986 699999999974

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.27  E-value=9.7e-13  Score=68.13  Aligned_cols=33  Identities=33%  Similarity=0.690  Sum_probs=23.1

Q ss_pred             HhCCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         290 VHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       290 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      +|++++||.|.+||++|...+.|..|+++|+||
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            366777777777777777777777777777664

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.26  E-value=8.1e-13  Score=68.43  Aligned_cols=33  Identities=48%  Similarity=0.876  Sum_probs=31.1

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      +|+|||||+|.+|+++|.....|..|+++|+++
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            599999999999999999999999999999875

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.21  E-value=2.2e-12  Score=69.32  Aligned_cols=35  Identities=23%  Similarity=0.507  Sum_probs=25.9

Q ss_pred             HHHHhCCCCCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         287 HQLVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       287 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      |.++|+|++||+|++|+++|+..+.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            45677777777777777777777777777777754

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=2.7e-12  Score=68.45  Aligned_cols=34  Identities=21%  Similarity=0.587  Sum_probs=23.6

Q ss_pred             HHhCCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         289 LVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       289 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      |+|+|++||.|.+||++|+..+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            3567777777777777777777777777777654

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.20  E-value=2.2e-12  Score=68.77  Aligned_cols=34  Identities=41%  Similarity=0.681  Sum_probs=31.1

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcCCC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGEK   34 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   34 (345)
                      +|+||+||+|.+|+++|.....|..|+++|.++.
T Consensus         2 ~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~~   35 (36)
T d1x6ha2           2 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN   35 (36)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSS
T ss_pred             CCCCCCCEECCCCCCCcCCHhHHHHhCcccCCCC
Confidence            6999999999999999999999999999998653

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.20  E-value=2.4e-12  Score=67.57  Aligned_cols=32  Identities=31%  Similarity=0.703  Sum_probs=30.0

Q ss_pred             CcCCCCccCCCCCCCCCCCchhHHHHhhhcCC
Q psy8793           2 HQGIKQYQCSQCPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         2 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      |+|||||+|.+|++.|..+..|..|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            79999999999999999999999999999865

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=3.4e-12  Score=69.12  Aligned_cols=37  Identities=24%  Similarity=0.499  Sum_probs=34.7

Q ss_pred             HHhhhhcCCceeecCcCccccCChHHHHHHHHHhCCC
Q psy8793         258 YHKQSIHNNEIFKCTKCDKVFQHIQLLNRHQLVHMDT  294 (345)
Q Consensus       258 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  294 (345)
                      +|+.+|.+++||.|++||++|...+.|..|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5788999999999999999999999999999999985

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.15  E-value=9.1e-12  Score=66.88  Aligned_cols=32  Identities=31%  Similarity=0.628  Sum_probs=26.4

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTG   32 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   32 (345)
                      +|+|||||+|++|+++|..+..|..|+++|..
T Consensus         5 ~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           5 GSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             TTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             ccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            47888888888888888888888888888864

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.15  E-value=1.2e-11  Score=62.06  Aligned_cols=29  Identities=31%  Similarity=0.607  Sum_probs=20.5

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      +||+|++|+++|+..+.|..|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            46777777777777777777777777664

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=7.1e-12  Score=66.63  Aligned_cols=32  Identities=34%  Similarity=0.622  Sum_probs=27.8

Q ss_pred             CCcCCCCccCCCCCCCCCCCchhHHHHhhhcC
Q psy8793           1 WHQGIKQYQCSQCPKAFNQKGNLKEHFRIHTG   32 (345)
Q Consensus         1 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   32 (345)
                      +|+|||||+|++|++.|..+.+|..|+..++.
T Consensus         2 ~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           2 THSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             ccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            69999999999999999999999999765443

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=1.3e-11  Score=64.78  Aligned_cols=32  Identities=31%  Similarity=0.595  Sum_probs=21.4

Q ss_pred             hCCCCCcCCCCCccccCChHHHHHHhhhhcCC
Q psy8793         291 HMDTRPYQCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       291 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      |+|++||+|.+|++.|+..++|.+|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            46666666666666666666666666666653

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.11  E-value=2.9e-11  Score=60.46  Aligned_cols=29  Identities=31%  Similarity=0.779  Sum_probs=21.8

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      +||.|++||++|+..+.|.+|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            46777777777777777777777777764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1.7e-11  Score=65.11  Aligned_cols=33  Identities=18%  Similarity=0.560  Sum_probs=22.8

Q ss_pred             HHhCCCCCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         289 LVHMDTRPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       289 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      ++|+|++||.|++|+++|+..++|+.|++.+++
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            357777777777777777777777777654443

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.09  E-value=1.7e-11  Score=60.60  Aligned_cols=28  Identities=32%  Similarity=0.764  Sum_probs=16.2

Q ss_pred             CCCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         294 TRPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       294 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      ++||+|++|+++|+..+.|.+|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            3555555555555555666666555554

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.06  E-value=4e-11  Score=60.10  Aligned_cols=29  Identities=28%  Similarity=0.621  Sum_probs=27.0

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhCCCC
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      +||+|++|+++|...+.|.+|+++|+|++
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            58999999999999999999999999985

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=2.9e-11  Score=63.99  Aligned_cols=27  Identities=26%  Similarity=0.709  Sum_probs=15.2

Q ss_pred             CccccCChHHHHHHhhhhcCCCccccc
Q psy8793         302 CPMAYKTNISLSAHLMKHTGAKPYVCE  328 (345)
Q Consensus       302 C~~~f~~~~~l~~H~~~h~~~~~~~C~  328 (345)
                      |++.|+..+.|++|+++|+|++||.|.
T Consensus         9 C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           9 CGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             TCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CCCeeCChhHhccccCeeCCCCCEeCC
Confidence            555555555555555555555555554

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.02  E-value=7.4e-11  Score=58.30  Aligned_cols=28  Identities=25%  Similarity=0.509  Sum_probs=26.2

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCC
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMD  293 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  293 (345)
                      ++||+|++|++.|...+.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5899999999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=7.4e-11  Score=58.97  Aligned_cols=29  Identities=28%  Similarity=0.620  Sum_probs=26.7

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhCCCC
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      +||.|++|+++|...+.|..|+++|+|++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58999999999999999999999999875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.00  E-value=1.4e-10  Score=61.30  Aligned_cols=33  Identities=39%  Similarity=0.796  Sum_probs=30.8

Q ss_pred             eecCc--CccccCChHHHHHHHHHhCCCCCcCCCC
Q psy8793         269 FKCTK--CDKVFQHIQLLNRHQLVHMDTRPYQCPQ  301 (345)
Q Consensus       269 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~  301 (345)
                      |.|+.  |++.|...+.|.+|+++|+|++||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            78987  9999999999999999999999999974

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.98  E-value=1.3e-11  Score=69.94  Aligned_cols=32  Identities=19%  Similarity=0.571  Sum_probs=15.6

Q ss_pred             hCCCCCcCCCC--CccccCChHHHHHHhhhhcCC
Q psy8793         291 HMDTRPYQCPQ--CPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       291 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      |++++||+|++  |+++|+..++|..|+++|+|+
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccCC
Confidence            44444444433  555555555555555555444

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.90  E-value=1.1e-10  Score=65.96  Aligned_cols=42  Identities=21%  Similarity=0.379  Sum_probs=36.9

Q ss_pred             hhHHHHHhhhhcCCceeecCc--CccccCChHHHHHHHHHhCCCC
Q psy8793         253 PSSVLYHKQSIHNNEIFKCTK--CDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       253 ~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      +..+..|+. +.+++||+|.+  |++.|...+.|..|+++|+|++
T Consensus         4 ~~~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           4 RGSIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             CSSGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             cchhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            445667774 99999999987  9999999999999999999985

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=2.5e-10  Score=54.76  Aligned_cols=24  Identities=38%  Similarity=0.701  Sum_probs=13.1

Q ss_pred             eeecCcCccccCChHHHHHHHHHh
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                      ||+|.+||++|...+.|..|+++|
T Consensus         2 Py~C~eCgK~F~~~s~L~~HqriH   25 (26)
T d1x6ea2           2 PYKCLECGKAFSQNSGLINHQRIH   25 (26)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcCeeccCcccccCccCC
Confidence            455555555555555555555554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=4.7e-10  Score=53.79  Aligned_cols=26  Identities=38%  Similarity=0.769  Sum_probs=24.3

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhc
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHT  320 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~  320 (345)
                      +||+|.+||++|...+.|.+|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            68999999999999999999999985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.88  E-value=6.7e-10  Score=55.75  Aligned_cols=28  Identities=36%  Similarity=0.714  Sum_probs=17.8

Q ss_pred             CCcCCCC--CccccCChHHHHHHhhhhcCC
Q psy8793         295 RPYQCPQ--CPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       295 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      +||.|++  |+++|+..+.|+.|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            4566655  666666666666666666654

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=8.7e-10  Score=55.46  Aligned_cols=26  Identities=35%  Similarity=0.517  Sum_probs=13.2

Q ss_pred             eeecCc--CccccCChHHHHHHHHHhCC
Q psy8793         268 IFKCTK--CDKVFQHIQLLNRHQLVHMD  293 (345)
Q Consensus       268 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  293 (345)
                      ||.|++  |+++|...+.|.+|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            455544  55555555555555555544

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.80  E-value=1.9e-09  Score=54.75  Aligned_cols=29  Identities=34%  Similarity=0.701  Sum_probs=19.7

Q ss_pred             CCcCC--CCCccccCChHHHHHHhhhhcCCC
Q psy8793         295 RPYQC--PQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       295 ~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      +||.|  +.|+++|+..++|..|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            46677  357777777777777777777664

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1.8e-09  Score=54.15  Aligned_cols=28  Identities=29%  Similarity=0.529  Sum_probs=25.9

Q ss_pred             ceeecCc--CccccCChHHHHHHHHHhCCC
Q psy8793         267 EIFKCTK--CDKVFQHIQLLNRHQLVHMDT  294 (345)
Q Consensus       267 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  294 (345)
                      +||.|++  |++.|...+.|.+|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5899988  999999999999999999985

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.77  E-value=1.9e-09  Score=54.16  Aligned_cols=28  Identities=32%  Similarity=0.788  Sum_probs=26.0

Q ss_pred             CCcCCCC--CccccCChHHHHHHhhhhcCC
Q psy8793         295 RPYQCPQ--CPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       295 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      +||.|++  |+++|+..+.|..|+++|+|+
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            6899977  999999999999999999986

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.69  E-value=4.8e-09  Score=53.18  Aligned_cols=29  Identities=34%  Similarity=0.614  Sum_probs=25.9

Q ss_pred             ceeecCc--CccccCChHHHHHHHHHhCCCC
Q psy8793         267 EIFKCTK--CDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       267 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      +||.|++  |++.|...+.|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            5899964  9999999999999999999875

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.64  E-value=1.1e-08  Score=52.04  Aligned_cols=29  Identities=31%  Similarity=0.650  Sum_probs=25.7

Q ss_pred             CCCccCCC--CCCCCCCCchhHHHHhhhcCC
Q psy8793           5 IKQYQCSQ--CPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         5 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      |+||.|++  |+++|.+...|..|+++|+..
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            78999988  999999999999999999753

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.58  E-value=8.2e-09  Score=51.19  Aligned_cols=25  Identities=32%  Similarity=0.671  Sum_probs=12.8

Q ss_pred             eeecCc--CccccCChHHHHHHHHHhC
Q psy8793         268 IFKCTK--CDKVFQHIQLLNRHQLVHM  292 (345)
Q Consensus       268 ~~~C~~--C~~~f~~~~~l~~H~~~h~  292 (345)
                      ||.|++  |+++|...+.|.+|+++|+
T Consensus         2 p~~C~~~gC~k~F~~~~~L~~H~r~Ht   28 (29)
T d1a1ia1           2 PYACPVESCDRRFSRSADLTRHIRIHT   28 (29)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHTHHHH
T ss_pred             CeECCCCCCCcEECchhHhhhhcCccC
Confidence            455544  5555555555555555544

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.57  E-value=1.2e-08  Score=50.55  Aligned_cols=27  Identities=41%  Similarity=0.945  Sum_probs=24.9

Q ss_pred             CCcCCCC--CccccCChHHHHHHhhhhcC
Q psy8793         295 RPYQCPQ--CPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       295 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  321 (345)
                      +||.|++  |+++|+..+.|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            6899966  99999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.56  E-value=3e-08  Score=50.38  Aligned_cols=28  Identities=36%  Similarity=0.700  Sum_probs=17.1

Q ss_pred             CCCcCCCC--CccccCChHHHHHHhhhhcC
Q psy8793         294 TRPYQCPQ--CPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       294 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  321 (345)
                      ++||.|++  |+++|+..++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            35666654  66666666666666666654

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=3.9e-08  Score=44.37  Aligned_cols=26  Identities=31%  Similarity=0.662  Sum_probs=18.6

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      |++|+.|++.|+.+..|+.|++.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            45677777777777777777777764

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.52  E-value=3.1e-08  Score=48.45  Aligned_cols=26  Identities=42%  Similarity=0.793  Sum_probs=23.2

Q ss_pred             CCccCCC--CCCCCCCCchhHHHHhhhc
Q psy8793           6 KQYQCSQ--CPKAFNQKGNLKEHFRIHT   31 (345)
Q Consensus         6 ~~~~C~~--C~~~f~~~~~l~~H~~~h~   31 (345)
                      |||.|++  |+++|.+...|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899988  9999999999999999884

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.44  E-value=3.6e-08  Score=48.22  Aligned_cols=24  Identities=33%  Similarity=0.944  Sum_probs=12.4

Q ss_pred             CcCCCC--CccccCChHHHHHHhhhh
Q psy8793         296 PYQCPQ--CPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       296 ~~~C~~--C~~~f~~~~~l~~H~~~h  319 (345)
                      ||.|++  |+++|+..++|+.|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            455543  555555555555555554

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.35  E-value=7.3e-08  Score=45.08  Aligned_cols=27  Identities=30%  Similarity=0.660  Sum_probs=22.6

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHhhhc
Q psy8793           5 IKQYQCSQCPKAFNQKGNLKEHFRIHT   31 (345)
Q Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~   31 (345)
                      |+||.|.+|++.|++.....+|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            678888888888888888888888875

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=1e-07  Score=42.99  Aligned_cols=26  Identities=46%  Similarity=0.894  Sum_probs=21.4

Q ss_pred             CccCCCCCCCCCCCchhHHHHhhhcC
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFRIHTG   32 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~~   32 (345)
                      |.+|++|++.|.++..|..|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            56888888888888888888888864

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.31  E-value=7.4e-08  Score=45.69  Aligned_cols=29  Identities=34%  Similarity=0.699  Sum_probs=25.8

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHhhhcCC
Q psy8793           5 IKQYQCSQCPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      |+||.|++|+..|.++..+..|+++|.+.
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccchHHHHhhccccceEeeecccCc
Confidence            68999999999999999999999998753

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=1.9e-07  Score=45.37  Aligned_cols=31  Identities=29%  Similarity=0.675  Sum_probs=21.7

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhcCCCccc
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHTGAKPYV  326 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  326 (345)
                      ...|..||+.|.+...|.+|...|+|++||.
T Consensus         5 ~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           5 QVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             SEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            3457777777777777777777777777763

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.20  E-value=5.8e-07  Score=42.00  Aligned_cols=26  Identities=27%  Similarity=0.617  Sum_probs=16.5

Q ss_pred             CceeecCcCccccCChHHHHHHHHHh
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h  291 (345)
                      ++||.|.+||+.|.......+|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            35666666666666666666666665

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.20  E-value=7.4e-07  Score=41.53  Aligned_cols=27  Identities=26%  Similarity=0.587  Sum_probs=19.3

Q ss_pred             eecCcCccccCChHHHHHHHHHhCCCC
Q psy8793         269 FKCTKCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       269 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      |.|++||......+.|+.|+++|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            667777777777777777777777653

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=4.9e-07  Score=41.83  Aligned_cols=27  Identities=44%  Similarity=0.978  Sum_probs=13.3

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      +||+|..|.+.-...+.|..|++.|+|
T Consensus         2 rpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           2 RPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CcceeeecccccCCchheEEeeecccC
Confidence            444555555444445555555555444

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.13  E-value=6.6e-07  Score=42.37  Aligned_cols=27  Identities=37%  Similarity=0.919  Sum_probs=16.1

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      +||.|++|+.+|..+.-+..|++.|.|
T Consensus         2 kp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           2 KPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCcccchHHHHhhccccceEeeecccC
Confidence            556666666666666666666665554

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.12  E-value=1.1e-06  Score=40.67  Aligned_cols=29  Identities=24%  Similarity=0.381  Sum_probs=24.4

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCC
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDT  294 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  294 (345)
                      ++||+|..|...-.+.++|..|++.|+|+
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceeeecccccCCchheEEeeecccCc
Confidence            46888888888888888899998888863

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.04  E-value=2e-06  Score=40.01  Aligned_cols=27  Identities=30%  Similarity=0.614  Sum_probs=25.6

Q ss_pred             cCCCCCccccCChHHHHHHhhhhcCCC
Q psy8793         297 YQCPQCPMAYKTNISLSAHLMKHTGAK  323 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~~h~~~~  323 (345)
                      |.|++||....-.+-|+.|++.|++++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCCC
Confidence            789999999999999999999999975

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.00  E-value=2e-06  Score=41.73  Aligned_cols=31  Identities=39%  Similarity=0.863  Sum_probs=26.4

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhCCCCCc
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHMDTRPY  297 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  297 (345)
                      +..-|..||+.|..-..|.+|..+|.+++||
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            3467888999999999999998889999887

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=3.6e-06  Score=39.93  Aligned_cols=27  Identities=19%  Similarity=0.389  Sum_probs=18.7

Q ss_pred             ceeecCc--CccccCChHHHHHHHHHhCC
Q psy8793         267 EIFKCTK--CDKVFQHIQLLNRHQLVHMD  293 (345)
Q Consensus       267 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  293 (345)
                      +||.|..  |++++...++|+.|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            4677766  77777777777777776543

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.96  E-value=2.6e-06  Score=39.16  Aligned_cols=24  Identities=33%  Similarity=0.688  Sum_probs=12.6

Q ss_pred             CCCCCccccCChHHHHHHhhhhcC
Q psy8793         298 QCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       298 ~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      .|.+||+.|...+.|++|..+|+|
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            355555555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=3.7e-06  Score=38.64  Aligned_cols=27  Identities=41%  Similarity=0.774  Sum_probs=23.8

Q ss_pred             eeecCcCccccCChHHHHHHHHHhCCC
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVHMDT  294 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  294 (345)
                      .+.|.+||+.|...+.|.+|..+|+++
T Consensus         2 ~hvc~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           2 VHVCAECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             CEECTTTCCEESSHHHHHHHGGGTSCC
T ss_pred             cchHHHHhHHHHHHHHHHHHhhcccCC
Confidence            367999999999999999999999875

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.88  E-value=3.7e-06  Score=38.52  Aligned_cols=26  Identities=38%  Similarity=0.774  Sum_probs=16.8

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhc
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHT  320 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~  320 (345)
                      +||+|..|.+.-.+.++|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            56666666666666666666666664

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.80  E-value=9.5e-06  Score=36.65  Aligned_cols=25  Identities=36%  Similarity=0.745  Sum_probs=15.1

Q ss_pred             CCCCCccccCChHHHHHHhhhhcCC
Q psy8793         298 QCPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       298 ~C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      +|+.|.++|.++.-|+.|-+.|+|+
T Consensus         2 qcp~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cCcchHHHHHHhHhhhhccccccCC
Confidence            4566666666666666666666655

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.78  E-value=4e-06  Score=38.88  Aligned_cols=29  Identities=34%  Similarity=0.724  Sum_probs=24.3

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHhhhcCC
Q psy8793           5 IKQYQCSQCPKAFNQKGNLKEHFRIHTGE   33 (345)
Q Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~   33 (345)
                      |..|.|.+|...|.++-.|+.||.+|+++
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            56788999999998888888898888764

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.75  E-value=7e-06  Score=38.92  Aligned_cols=27  Identities=33%  Similarity=0.705  Sum_probs=22.1

Q ss_pred             CCcCCCC--CccccCChHHHHHHhhhhcC
Q psy8793         295 RPYQCPQ--CPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       295 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  321 (345)
                      +||.|..  |++++++.++|++|++.++|
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5788855  88999999999999987664

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.74  E-value=1.6e-05  Score=37.12  Aligned_cols=25  Identities=24%  Similarity=0.606  Sum_probs=16.0

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhh
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h  319 (345)
                      +||+|.+|.++..+.++|+.|+++.
T Consensus         1 kpy~cqyc~yrsadssnlkthiktk   25 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTK   25 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHH
T ss_pred             CCccccccccccccchhhhhhhhcc
Confidence            4566666666666666666666643

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.68  E-value=1.9e-05  Score=35.02  Aligned_cols=23  Identities=30%  Similarity=0.638  Sum_probs=12.9

Q ss_pred             cCCCCCccccCChHHHHHHhhhh
Q psy8793         297 YQCPQCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~~h  319 (345)
                      |+|..|.++|..++.|.+|++.|
T Consensus         1 ykcglcersfveksalsrhqrvh   23 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGT
T ss_pred             CcccchHHHHHHHHHHHHHHHhh
Confidence            34555555555555555555554

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=1.9e-05  Score=36.83  Aligned_cols=26  Identities=15%  Similarity=0.312  Sum_probs=22.1

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhC
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHM  292 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~  292 (345)
                      +||+|.+|.......++|..|+++-+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkh   26 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKH   26 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHT
T ss_pred             CCccccccccccccchhhhhhhhccc
Confidence            57899999999999999999998743

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.65  E-value=2.3e-05  Score=35.34  Aligned_cols=26  Identities=27%  Similarity=0.531  Sum_probs=22.6

Q ss_pred             ecCcCccccCChHHHHHHHHHhCCCC
Q psy8793         270 KCTKCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       270 ~C~~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      +|+.|.+.|.++.-|..|-+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            68889999999999999998888874

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=1.7e-05  Score=35.18  Aligned_cols=24  Identities=42%  Similarity=0.825  Sum_probs=19.3

Q ss_pred             eecCcCccccCChHHHHHHHHHhC
Q psy8793         269 FKCTKCDKVFQHIQLLNRHQLVHM  292 (345)
Q Consensus       269 ~~C~~C~~~f~~~~~l~~H~~~h~  292 (345)
                      |+|..|..+|..++.|.+|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            678888888888888888888774

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.64  E-value=2.6e-05  Score=36.11  Aligned_cols=25  Identities=40%  Similarity=0.743  Sum_probs=18.9

Q ss_pred             ceeecCc--CccccCChHHHHHHHHHh
Q psy8793         267 EIFKCTK--CDKVFQHIQLLNRHQLVH  291 (345)
Q Consensus       267 ~~~~C~~--C~~~f~~~~~l~~H~~~h  291 (345)
                      .||.|+.  |++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            4677765  888888888888887776

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.57  E-value=3.9e-05  Score=35.04  Aligned_cols=26  Identities=31%  Similarity=0.608  Sum_probs=22.5

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhC
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHM  292 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~  292 (345)
                      +||+|..|...-...+.|..|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            57889999999888999999988885

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.55  E-value=1.5e-05  Score=40.95  Aligned_cols=30  Identities=27%  Similarity=0.688  Sum_probs=25.2

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHhhhcCCC
Q psy8793           5 IKQYQCSQCPKAFNQKGNLKEHFRIHTGEK   34 (345)
Q Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~   34 (345)
                      .+.|+|.+|++.|.+-..|--|+..|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            567899999999998889999998887654

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.54  E-value=8.3e-06  Score=37.90  Aligned_cols=22  Identities=41%  Similarity=0.991  Sum_probs=10.7

Q ss_pred             CccCCCCCCCCCCCchhHHHHh
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFR   28 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~   28 (345)
                      ||.|..|+.+|.++.+|..||+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmk   22 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMK   22 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHH
T ss_pred             CcccceeeeeEeeccchhHhhh
Confidence            3444555555555555555544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.53  E-value=2.2e-05  Score=36.48  Aligned_cols=23  Identities=35%  Similarity=0.875  Sum_probs=12.5

Q ss_pred             CcCCCCCccccCChHHHHHHhhh
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMK  318 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~  318 (345)
                      ||.|..|+..|.++.+|..||+.
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            34555555555555555555553

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.48  E-value=5.6e-05  Score=38.75  Aligned_cols=30  Identities=30%  Similarity=0.577  Sum_probs=22.6

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCCC
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDTR  295 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  295 (345)
                      .+.|+|.+|++.|.+..+|=-||+.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            356788888888888888888888776554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=2.6e-05  Score=40.07  Aligned_cols=24  Identities=50%  Similarity=0.935  Sum_probs=14.6

Q ss_pred             cCCCccccccchhhccccchhhhc
Q psy8793         320 TGAKPYVCEICNKVLTHRSSLISH  343 (345)
Q Consensus       320 ~~~~~~~C~~C~~~f~~~~~l~~H  343 (345)
                      +|.+||.|.+|++.|..+.++.+|
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH   24 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRH   24 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHh
Confidence            355666666666666666665555

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.14  E-value=0.00011  Score=34.20  Aligned_cols=23  Identities=26%  Similarity=0.395  Sum_probs=11.7

Q ss_pred             eeecCcCccccCChHHHHHHHHH
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      ||+|.+|.......++|..|++.
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHH
Confidence            45555555555555555555443

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.08  E-value=0.00023  Score=33.08  Aligned_cols=27  Identities=37%  Similarity=0.779  Sum_probs=21.0

Q ss_pred             CCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         295 RPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      +||+|.+|.......++|..|++.-++
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H~   27 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFHG   27 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCcccceecccccCcchHHHHHHHHcc
Confidence            578888888888888888888775443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.06  E-value=0.0004  Score=32.05  Aligned_cols=25  Identities=28%  Similarity=0.644  Sum_probs=11.2

Q ss_pred             eecCcCccccCChHHHHHHHHHhCC
Q psy8793         269 FKCTKCDKVFQHIQLLNRHQLVHMD  293 (345)
Q Consensus       269 ~~C~~C~~~f~~~~~l~~H~~~h~~  293 (345)
                      |.|..|...|...-.|..||-+|+|
T Consensus         5 ftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           5 FTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             EEeHHHHHHHHHHHhheeeeecccC
Confidence            4444444444444444444444443

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.06  E-value=0.00014  Score=33.76  Aligned_cols=28  Identities=29%  Similarity=0.755  Sum_probs=18.1

Q ss_pred             CCcCC--CCCccccCChHHHHHHhhhhcCC
Q psy8793         295 RPYQC--PQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       295 ~~~~C--~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      +||.|  .-|.+.|.+.-.|.+|...|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            35566  45667777777777776666654

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.97  E-value=0.0002  Score=34.11  Aligned_cols=21  Identities=33%  Similarity=0.645  Sum_probs=11.2

Q ss_pred             CcCCCCCccccCChHHHHHHh
Q psy8793         296 PYQCPQCPMAYKTNISLSAHL  316 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~  316 (345)
                      ||.|.+|++.|+...-|.+|.
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~   21 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHA   21 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHH
T ss_pred             CcccccccchhhHHHHHHHHH
Confidence            355555555555555555553

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.95  E-value=7.2e-05  Score=33.12  Aligned_cols=21  Identities=33%  Similarity=0.825  Sum_probs=15.2

Q ss_pred             ccccccchhhccccchhhhcc
Q psy8793         324 PYVCEICNKVLTHRSSLISHY  344 (345)
Q Consensus       324 ~~~C~~C~~~f~~~~~l~~H~  344 (345)
                      ||+|+-|...|.++.+|+.||
T Consensus         2 pykcsscsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHH
Confidence            577777777777777777765

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00041  Score=35.13  Aligned_cols=28  Identities=25%  Similarity=0.520  Sum_probs=21.0

Q ss_pred             CCceeec--CcCccccCChHHHHHHHHHhC
Q psy8793         265 NNEIFKC--TKCDKVFQHIQLLNRHQLVHM  292 (345)
Q Consensus       265 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~  292 (345)
                      +++||.|  +-|+.+|.++..|..|.+.|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            4678888  448888888888888877764

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=96.93  E-value=0.00031  Score=33.44  Aligned_cols=27  Identities=30%  Similarity=0.682  Sum_probs=19.8

Q ss_pred             eeecCcCccccCChHHHHHHHH-HhCCC
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQL-VHMDT  294 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~  294 (345)
                      ||.|.+|++.|....-|.+|.+ .|.|+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH~g~   28 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIHSGN   28 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcccccccchhhHHHHHHHHHHHHhcCc
Confidence            5778888888888888888864 46553

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.89  E-value=0.00016  Score=34.49  Aligned_cols=27  Identities=26%  Similarity=0.580  Sum_probs=16.8

Q ss_pred             ceeecCc--CccccCChHHHHHHH-HHhCC
Q psy8793         267 EIFKCTK--CDKVFQHIQLLNRHQ-LVHMD  293 (345)
Q Consensus       267 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~  293 (345)
                      +||.|.+  |.+.|...++-..|+ ++|.+
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            4566655  666666666666665 55543

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.82  E-value=0.00031  Score=36.01  Aligned_cols=26  Identities=23%  Similarity=0.571  Sum_probs=21.0

Q ss_pred             CCCCCcCCCCCccccCChHHHHHHhh
Q psy8793         292 MDTRPYQCPQCPMAYKTNISLSAHLM  317 (345)
Q Consensus       292 ~~~~~~~C~~C~~~f~~~~~l~~H~~  317 (345)
                      +|.+||.|..|++.|....++.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            46788888888888888888888854

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.80  E-value=0.00027  Score=32.09  Aligned_cols=22  Identities=36%  Similarity=0.762  Sum_probs=16.4

Q ss_pred             CccCCCCCCCCCCCchhHHHHh
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFR   28 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~   28 (345)
                      ||+|..|++.|.++.+|..|-.
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            5778888888877777777744

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.78  E-value=0.00039  Score=35.22  Aligned_cols=28  Identities=32%  Similarity=0.767  Sum_probs=25.3

Q ss_pred             CCCCcCC--CCCccccCChHHHHHHhhhhc
Q psy8793         293 DTRPYQC--PQCPMAYKTNISLSAHLMKHT  320 (345)
Q Consensus       293 ~~~~~~C--~~C~~~f~~~~~l~~H~~~h~  320 (345)
                      +++||.|  +-|+.+|.+.-.|..|...|.
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH~   32 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKHE   32 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhhe
Confidence            5799999  999999999999999988875

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.76  E-value=0.00058  Score=30.15  Aligned_cols=24  Identities=25%  Similarity=0.693  Sum_probs=20.6

Q ss_pred             CcccccccccccCCHHHHHHHHhh
Q psy8793         150 KPHTCELCSKGFLSAESYKCHLRR  173 (345)
Q Consensus       150 ~~~~C~~C~~~f~~~~~l~~H~~~  173 (345)
                      .||+|..|...|..+.+|+.|+..
T Consensus         1 mpykcsscsqqfmqkkdlqshmik   24 (26)
T d2dlqa1           1 MPYKCSSCSQQFMQKKDLQSHMIK   24 (26)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHH
T ss_pred             CCCcccHHHHHHHHHHHHHHHHHh
Confidence            378999999999999999999864

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.68  E-value=0.0002  Score=32.51  Aligned_cols=20  Identities=30%  Similarity=0.833  Sum_probs=13.8

Q ss_pred             ccccccchhhccccchhhhc
Q psy8793         324 PYVCEICNKVLTHRSSLISH  343 (345)
Q Consensus       324 ~~~C~~C~~~f~~~~~l~~H  343 (345)
                      ||.|+.||+.+.++.+|..|
T Consensus         1 pf~c~kcgkcyfrkenlleh   20 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEH   20 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHH
Confidence            56677777777777776665

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.67  E-value=0.00048  Score=31.47  Aligned_cols=23  Identities=22%  Similarity=0.520  Sum_probs=14.4

Q ss_pred             cCCCCCccccCChHHHHHHhhhh
Q psy8793         297 YQCPQCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~~h  319 (345)
                      -+|+.|.++.+.+..|+.|.++|
T Consensus         3 ekc~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           3 EKCSECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHGGG
T ss_pred             ccCcccccccCcHHHHHHhhccc
Confidence            34666666666666666666665

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.65  E-value=0.00052  Score=32.69  Aligned_cols=27  Identities=37%  Similarity=0.802  Sum_probs=21.8

Q ss_pred             CCccCCC--CCCCCCCCchhHHHH-hhhcC
Q psy8793           6 KQYQCSQ--CPKAFNQKGNLKEHF-RIHTG   32 (345)
Q Consensus         6 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~   32 (345)
                      +||.|.+  |.+.|.+.++-..|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            5888888  899998888888886 67754

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.0009  Score=30.57  Aligned_cols=25  Identities=24%  Similarity=0.416  Sum_probs=21.9

Q ss_pred             eeecCcCccccCChHHHHHHHHHhC
Q psy8793         268 IFKCTKCDKVFQHIQLLNRHQLVHM  292 (345)
Q Consensus       268 ~~~C~~C~~~f~~~~~l~~H~~~h~  292 (345)
                      |-+|+.|.++..+++.|..|.++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4589999999999999999999884

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.55  E-value=0.00091  Score=30.80  Aligned_cols=26  Identities=23%  Similarity=0.603  Sum_probs=15.7

Q ss_pred             CCccccccccCccccchHhHHHHhhh
Q psy8793         178 KPVTCTFENCTETFVESWAMRKHVRT  203 (345)
Q Consensus       178 ~~~~C~~~~C~~~f~~~~~l~~H~~~  203 (345)
                      .||.|+-+.|+..|...+.|++|.+.
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekv   27 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKV   27 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhc
Confidence            35666666666666666666666544

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.54  E-value=0.00079  Score=31.16  Aligned_cols=28  Identities=36%  Similarity=0.781  Sum_probs=22.7

Q ss_pred             ceeecCc--CccccCChHHHHHHHHHhCCC
Q psy8793         267 EIFKCTK--CDKVFQHIQLLNRHQLVHMDT  294 (345)
Q Consensus       267 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  294 (345)
                      +||.|.+  |.+.|.+--.|.+|..+|+|+
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            4678866  888898888888888888764

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.44  E-value=0.001  Score=35.43  Aligned_cols=25  Identities=20%  Similarity=0.381  Sum_probs=22.4

Q ss_pred             CcCCCCCccccCChHHHHHHhhhhc
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLMKHT  320 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~~h~  320 (345)
                      .|.|..|++.|.+...|++|...|.
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeeccccccccCCHHHHhHhHHhcC
Confidence            4789999999999999999988874

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.26  E-value=0.00041  Score=33.81  Aligned_cols=19  Identities=37%  Similarity=0.933  Sum_probs=15.6

Q ss_pred             cccccchhhccccchhhhc
Q psy8793         325 YVCEICNKVLTHRSSLISH  343 (345)
Q Consensus       325 ~~C~~C~~~f~~~~~l~~H  343 (345)
                      |.|..|++.|+++..+.+|
T Consensus         5 fvcskcgktftrrntm~rh   23 (37)
T d1x6ha1           5 FVCSKCGKTFTRRNTMARH   23 (37)
T ss_dssp             EECSSSCCEESCHHHHHHH
T ss_pred             eeecccccchhcchHHHHH
Confidence            7788888888888888776

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.07  E-value=0.00087  Score=29.70  Aligned_cols=22  Identities=41%  Similarity=0.902  Sum_probs=16.3

Q ss_pred             ccCCCCCCCCCCCchhHHHHhh
Q psy8793           8 YQCSQCPKAFNQKGNLKEHFRI   29 (345)
Q Consensus         8 ~~C~~C~~~f~~~~~l~~H~~~   29 (345)
                      |.|++|-+.|.++.++..|.+.
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6777777777777777777653

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.05  E-value=0.0025  Score=28.96  Aligned_cols=24  Identities=21%  Similarity=0.494  Sum_probs=21.6

Q ss_pred             ccccccccccCCHHHHHHHHhhhc
Q psy8793         152 HTCELCSKGFLSAESYKCHLRRHK  175 (345)
Q Consensus       152 ~~C~~C~~~f~~~~~l~~H~~~~~  175 (345)
                      |.||.|+.....+++|+.|++..+
T Consensus         3 ~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHHHTS
T ss_pred             ccCCcchhheeehhhhhHHhhhcc
Confidence            789999999999999999998754

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.81  E-value=0.0047  Score=27.29  Aligned_cols=22  Identities=23%  Similarity=0.496  Sum_probs=16.5

Q ss_pred             eecCcCccccCChHHHHHHHHH
Q psy8793         269 FKCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       269 ~~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      |.|++|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            6677777777777777777664

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.72  E-value=0.0023  Score=29.07  Aligned_cols=21  Identities=29%  Similarity=0.760  Sum_probs=12.4

Q ss_pred             cCCCCCccccCChHHHHHHhh
Q psy8793         297 YQCPQCPMAYKTNISLSAHLM  317 (345)
Q Consensus       297 ~~C~~C~~~f~~~~~l~~H~~  317 (345)
                      |+||.|+.....++.|..|++
T Consensus         3 ~qcphc~tiiarksdlrvhlr   23 (28)
T d2ct1a1           3 FHCPHCDTVIARKSDLGVHLR   23 (28)
T ss_dssp             EECSSSSCEESSHHHHHHHHH
T ss_pred             ccCCcchhheeehhhhhHHhh
Confidence            456666666666666666654

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.70  E-value=0.0071  Score=29.02  Aligned_cols=21  Identities=29%  Similarity=0.706  Sum_probs=13.9

Q ss_pred             CCcCCCCCccccCChHHHHHH
Q psy8793         295 RPYQCPQCPMAYKTNISLSAH  315 (345)
Q Consensus       295 ~~~~C~~C~~~f~~~~~l~~H  315 (345)
                      ..|.|+-||-+|+..+.|..|
T Consensus         7 arf~c~pcgirfss~stleah   27 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAH   27 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHH
T ss_pred             cceeccccceeecChhHHHhh
Confidence            346677777777777776666

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.41  E-value=0.0051  Score=28.91  Aligned_cols=29  Identities=21%  Similarity=0.724  Sum_probs=24.5

Q ss_pred             CCccccccccCccccchHhHHHHhhhhcC
Q psy8793         178 KPVTCTFENCTETFVESWAMRKHVRTCHN  206 (345)
Q Consensus       178 ~~~~C~~~~C~~~f~~~~~l~~H~~~~~~  206 (345)
                      +.|.|+++.|+..|...+.|..|.-.|.+
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            45889999999999999999999887765

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.18  E-value=0.0067  Score=29.92  Aligned_cols=24  Identities=29%  Similarity=0.587  Sum_probs=13.9

Q ss_pred             CCCCccccCChHHHHHHhhhhcCC
Q psy8793         299 CPQCPMAYKTNISLSAHLMKHTGA  322 (345)
Q Consensus       299 C~~C~~~f~~~~~l~~H~~~h~~~  322 (345)
                      |+.=++.|.....|..|++.|+|+
T Consensus        10 C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          10 CSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCCCcchhHHHHHHHHhhcCCC
Confidence            334445566666666666666654

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.02  E-value=0.0018  Score=31.61  Aligned_cols=28  Identities=25%  Similarity=0.739  Sum_probs=23.3

Q ss_pred             cCCCCccCCCCCCCCCCCchhHHHHh-hh
Q psy8793           3 QGIKQYQCSQCPKAFNQKGNLKEHFR-IH   30 (345)
Q Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~-~h   30 (345)
                      .|+..|+|.+|.+.|...+++-+|.. +|
T Consensus         4 Eg~~~yRC~~C~r~YTHISNFCRHyvtSH   32 (37)
T d2drpa1           4 EGEHTYRCKVCSRVYTHISNFCRHYVTSH   32 (37)
T ss_dssp             EETTEEECTTTCCEESSHHHHHHHHHHHS
T ss_pred             ccCcEEEeehhhHHHHHHHHHHHHHHhhc
Confidence            56788999999999999999999954 44

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.82  E-value=0.0041  Score=30.17  Aligned_cols=25  Identities=24%  Similarity=0.635  Sum_probs=18.0

Q ss_pred             CccCCCCCCCCCCCchhHHHHhhhc
Q psy8793           7 QYQCSQCPKAFNQKGNLKEHFRIHT   31 (345)
Q Consensus         7 ~~~C~~C~~~f~~~~~l~~H~~~h~   31 (345)
                      .|.|..|+++|.++..+.+|...-.
T Consensus         4 afvcskcgktftrrntm~rha~nc~   28 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCA   28 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCC
T ss_pred             eeeecccccchhcchHHHHHhhhcC
Confidence            4677788888877777777766544

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.79  E-value=0.007  Score=32.12  Aligned_cols=26  Identities=27%  Similarity=0.538  Sum_probs=18.7

Q ss_pred             CCccCCCCCCCCCCCchhHHHHhhhc
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHFRIHT   31 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~   31 (345)
                      ..|.|-+|++.|.....|+.|-..|-
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35777777777777777777776664

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.40  E-value=0.011  Score=29.18  Aligned_cols=21  Identities=19%  Similarity=0.110  Sum_probs=16.0

Q ss_pred             CccccCChHHHHHHHHHhCCC
Q psy8793         274 CDKVFQHIQLLNRHQLVHMDT  294 (345)
Q Consensus       274 C~~~f~~~~~l~~H~~~h~~~  294 (345)
                      =++.|.....|..||++|+|+
T Consensus        13 ~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCcchhHHHHHHHHhhcCCC
Confidence            345588888888888888875

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.38  E-value=0.019  Score=25.72  Aligned_cols=24  Identities=33%  Similarity=0.696  Sum_probs=15.4

Q ss_pred             eecCc--CccccCChHHHHHHHHHhC
Q psy8793         269 FKCTK--CDKVFQHIQLLNRHQLVHM  292 (345)
Q Consensus       269 ~~C~~--C~~~f~~~~~l~~H~~~h~  292 (345)
                      |.|.+  |++.|....+|..|.-+|+
T Consensus         2 yvchfe~c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           2 YVCHFENCGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             EECCSTTCCCEESSHHHHHHHHHHHH
T ss_pred             eEEEecCchHHHhhccceEEEeeccc
Confidence            45544  7777777777777766554

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.90  E-value=0.031  Score=26.74  Aligned_cols=22  Identities=32%  Similarity=0.587  Sum_probs=16.3

Q ss_pred             ceeecCcCccccCChHHHHHHH
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQ  288 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~  288 (345)
                      ..|.|+-||-.|.+.+.|..|+
T Consensus         7 arf~c~pcgirfss~stleahq   28 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHT
T ss_pred             cceeccccceeecChhHHHhhh
Confidence            3477888888888888777773

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.53  E-value=0.048  Score=25.05  Aligned_cols=26  Identities=27%  Similarity=0.489  Sum_probs=21.6

Q ss_pred             ccccccccccCCHHHHHHHHhhhcCC
Q psy8793         152 HTCELCSKGFLSAESYKCHLRRHKGE  177 (345)
Q Consensus       152 ~~C~~C~~~f~~~~~l~~H~~~~~~~  177 (345)
                      |.|..|++...+...++-|++..++.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             eechhHHHHHhhccCceEEEeecccC
Confidence            78999999999999999998876654

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.42  E-value=0.026  Score=25.69  Aligned_cols=19  Identities=26%  Similarity=0.639  Sum_probs=9.5

Q ss_pred             CCccccCChHHHHHHhhhh
Q psy8793         301 QCPMAYKTNISLSAHLMKH  319 (345)
Q Consensus       301 ~C~~~f~~~~~l~~H~~~h  319 (345)
                      .|++.|.+.+.+++|+.+|
T Consensus         8 gC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           8 GCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             TCCCEESSHHHHHHHHGGG
T ss_pred             cHHHHhhchHHHHHHhhcc
Confidence            3445555555555555444

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.34  E-value=0.06  Score=24.71  Aligned_cols=25  Identities=24%  Similarity=0.539  Sum_probs=16.0

Q ss_pred             cccCCCcccccChhhHHHHHHHhcC
Q psy8793         213 FPCDKCEKVYSCASSLTKHMKARLG  237 (345)
Q Consensus       213 ~~C~~C~~~f~~~~~l~~H~~~~~~  237 (345)
                      |.|..|++...+...+..|....+.
T Consensus         3 ftc~hcgkqlks~~gmkyhvmadhn   27 (30)
T d2ctda2           3 FTCHHCGKQLRSLAGMKYHVMANHN   27 (30)
T ss_dssp             CCCSSSCCCCSSHHHHHHHHHHHTC
T ss_pred             eechhHHHHHhhccCceEEEeeccc
Confidence            5666677777666666666655443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.96  E-value=0.0088  Score=35.43  Aligned_cols=25  Identities=16%  Similarity=0.389  Sum_probs=20.0

Q ss_pred             CCccCCcCCccccchhhhccccccc
Q psy8793          34 KPFTCNICSRKFTTYSQVRRSSNTS   58 (345)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~   58 (345)
                      ..|.|..|++.|.+...|..|+++.
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~ksK   38 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFRSK   38 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             CEEecccccCccCCHHHHHHHHccc
Confidence            3488888888888888888888764

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.88  E-value=0.042  Score=25.01  Aligned_cols=23  Identities=26%  Similarity=0.638  Sum_probs=18.8

Q ss_pred             ecCc--CccccCChHHHHHHHHHhC
Q psy8793         270 KCTK--CDKVFQHIQLLNRHQLVHM  292 (345)
Q Consensus       270 ~C~~--C~~~f~~~~~l~~H~~~h~  292 (345)
                      .|+.  |++.|.+.+++..|+.+|.
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtHG   27 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTHG   27 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGGS
T ss_pred             cCCcccHHHHhhchHHHHHHhhccC
Confidence            4654  9999999999999988874

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.84  E-value=0.052  Score=25.40  Aligned_cols=19  Identities=11%  Similarity=0.203  Sum_probs=8.6

Q ss_pred             ccccCCChhHHHHHhhhhc
Q psy8793         246 CHKEFTHPSSVLYHKQSIH  264 (345)
Q Consensus       246 C~~~f~~~~~l~~H~~~~~  264 (345)
                      |+..|...+.|..|+..|+
T Consensus        11 C~A~ynk~wkL~AHLckHT   29 (31)
T d1tf3a1          11 CGAAYNKNWKLQAHLSKHT   29 (31)
T ss_dssp             GCCEESSHHHHHHHHHHHH
T ss_pred             cchhhccchhhhHHhhhhc
Confidence            4444444444444444444

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.60  E-value=0.036  Score=32.07  Aligned_cols=36  Identities=25%  Similarity=0.604  Sum_probs=19.4

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCcc
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPM  304 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  304 (345)
                      ..-|.|+.|++.|..-.++.   ..-.....|.|..|+.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~---L~d~~~~~F~C~~C~~   47 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHT   47 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCC
T ss_pred             CCceECCCCCCCcchhhHHH---hcCcCCCeEEecCCCC
Confidence            34467777777665544333   2333334566666664

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=91.47  E-value=0.071  Score=27.17  Aligned_cols=25  Identities=28%  Similarity=0.794  Sum_probs=14.1

Q ss_pred             ceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCcc
Q psy8793         267 EIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPM  304 (345)
Q Consensus       267 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~  304 (345)
                      +.|.|+.||..+             .|+.|-.||.|+.
T Consensus         4 ~~~~C~vCG~i~-------------~g~~P~~CPvCg~   28 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDEAPEYCPVCGA   28 (37)
T ss_dssp             CEEECTTTCCEE-------------ESCCCSBCTTTCC
T ss_pred             cEEECCCCCCEe-------------cCCCCCcCCCCCC
Confidence            446666666554             2345556666664

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.95  E-value=0.056  Score=31.25  Aligned_cols=37  Identities=16%  Similarity=0.513  Sum_probs=23.9

Q ss_pred             CCCccCCCCCCCCCCCchhHHHHhhhcCCCCccCCcCCcc
Q psy8793           5 IKQYQCSQCPKAFNQKGNLKEHFRIHTGEKPFTCNICSRK   44 (345)
Q Consensus         5 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~   44 (345)
                      ..-|.|+.|+++|.....+..   .-.....|.|.+|+-.
T Consensus        12 ~~~y~Cp~C~~~ys~Lda~~L---~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTFTDLEANQL---FDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEEEHHHHHHH---EETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCcchhhHHHh---cCcCCCeEEecCCCCE
Confidence            345999999999964333222   2223345999999765

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=90.74  E-value=0.033  Score=32.83  Aligned_cols=22  Identities=18%  Similarity=0.442  Sum_probs=15.9

Q ss_pred             CcCCCCCccccCChHHHHHHhh
Q psy8793         296 PYQCPQCPMAYKTNISLSAHLM  317 (345)
Q Consensus       296 ~~~C~~C~~~f~~~~~l~~H~~  317 (345)
                      .|.|..|++.|.+...|..|++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTT
T ss_pred             EEecccccCccCCHHHHHHHHc
Confidence            4677777777777777777766

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=90.26  E-value=0.12  Score=26.07  Aligned_cols=27  Identities=19%  Similarity=0.507  Sum_probs=16.6

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhCCCCCcCCCCCccc
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHMDTRPYQCPQCPMA  305 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  305 (345)
                      ++.|.|+.||...             .|+.|-.|+.|+..
T Consensus         3 ~~~~vC~vCGyi~-------------~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           3 DKFHLCPICGYIH-------------KGEDFEKCPICFRP   29 (36)
T ss_dssp             CCEEECSSSCCEE-------------ESSCCSBCTTTCCB
T ss_pred             CCEEECCCCCCEe-------------eCCCCCcCCCCCCc
Confidence            4557777777654             23455667777743

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.42  E-value=0.22  Score=24.08  Aligned_cols=25  Identities=28%  Similarity=0.797  Sum_probs=17.0

Q ss_pred             CceeecCcCccccCChHHHHHHHHH
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      +..|.|..|.+.+...+++-+|.-+
T Consensus         6 ~~~yRC~~C~r~YTHISNFCRHyvt   30 (37)
T d2drpa1           6 EHTYRCKVCSRVYTHISNFCRHYVT   30 (37)
T ss_dssp             TTEEECTTTCCEESSHHHHHHHHHH
T ss_pred             CcEEEeehhhHHHHHHHHHHHHHHh
Confidence            3457777777777777777777543

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.29  E-value=0.13  Score=27.06  Aligned_cols=24  Identities=25%  Similarity=0.418  Sum_probs=11.6

Q ss_pred             CceeecCcCccccCChHHHHHHHH
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQL  289 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~  289 (345)
                      +.|-.|++|+.......+|.+|+.
T Consensus        22 ~qpatcpic~avirqsrnlrrhle   45 (54)
T d1yuja_          22 EQPATCPICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             SCCEECTTTCCEESSHHHHHHHHH
T ss_pred             cCCCCCchHHHHHHHHHHHHHHHH
Confidence            344445555555555555555543

>d6rxna_ g.41.5.1 (A:) Rubredoxin {Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Desulfovibrio desulfuricans, strain 27774 [TaxId: 876]

Probab=89.12  E-value=0.052  Score=29.08  Aligned_cols=35  Identities=14%  Similarity=0.547  Sum_probs=21.6

Q ss_pred             CCccCCCCCCCCCCCchhHHHHhhhcC--CCCccCCcCCcc
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEHFRIHTG--EKPFTCNICSRK   44 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H~~~h~~--~~~~~C~~C~~~   44 (345)
                      +.|.|.+|+..|.....=    .+--.  ...|.|++|+..
T Consensus         2 ~~y~C~~CgyiYd~~~Gd----gt~Fe~LP~dw~CP~C~a~   38 (45)
T d6rxna_           2 QKYVCNVCGYEYDPAEHD----NVPFDQLPDDWCCPVCGVS   38 (45)
T ss_dssp             CCEEETTTCCEECGGGGT----TCCGGGSCTTCBCTTTCCB
T ss_pred             CCeEeCCCCeEECcccCC----CCCHHHCCCCCCCcCCCCc
Confidence            368999999999642210    11111  123899999863

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=88.81  E-value=0.29  Score=25.63  Aligned_cols=31  Identities=23%  Similarity=0.434  Sum_probs=22.8

Q ss_pred             CCCCccCccccccCCChhHHHHHhhhhcCCc
Q psy8793         237 GRQPVSCDICHKEFTHPSSVLYHKQSIHNNE  267 (345)
Q Consensus       237 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~  267 (345)
                      .++|..|++|+...+...+|.+|+.-.|-.+
T Consensus        21 s~qpatcpic~avirqsrnlrrhlel~hf~k   51 (54)
T d1yuja_          21 SEQPATCPICYAVIRQSRNLRRHLELRHFAK   51 (54)
T ss_dssp             TSCCEECTTTCCEESSHHHHHHHHHHHTSCS
T ss_pred             ccCCCCCchHHHHHHHHHHHHHHHHHHhhcc
Confidence            3567788888888888888888877665443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.15  E-value=0.32  Score=27.60  Aligned_cols=27  Identities=30%  Similarity=0.621  Sum_probs=22.5

Q ss_pred             CceeecCcCccccCChHHHHHHHHHhC
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLVHM  292 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  292 (345)
                      ...|+|..|.-.|.+-..|..|+..|.
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hn   42 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHN   42 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhcc
Confidence            456899999999999999999988774

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.56  E-value=0.18  Score=28.60  Aligned_cols=28  Identities=29%  Similarity=0.630  Sum_probs=25.0

Q ss_pred             CCCcCCCCCccccCChHHHHHHhhhhcC
Q psy8793         294 TRPYQCPQCPMAYKTNISLSAHLMKHTG  321 (345)
Q Consensus       294 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  321 (345)
                      ...|+|..|.-.|.....|..|+..|..
T Consensus        16 s~~yQC~HCd~K~~s~~el~~hl~~hne   43 (75)
T d1x6fa1          16 NSTYQCKHCDSKLQSTAELTSHLNIHNE   43 (75)
T ss_dssp             CSCEECSSSCCEESSHHHHHHHHHHHHH
T ss_pred             CceeeechhHHHHhhHHHHHHHHHhccH
Confidence            4569999999999999999999998864

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.39  E-value=0.27  Score=22.38  Aligned_cols=22  Identities=23%  Similarity=0.594  Sum_probs=14.9

Q ss_pred             ccccccCccccchHhHHHHhhh
Q psy8793         182 CTFENCTETFVESWAMRKHVRT  203 (345)
Q Consensus       182 C~~~~C~~~f~~~~~l~~H~~~  203 (345)
                      |.++.|++-|.++.-|..|++-
T Consensus         3 cdf~gc~kifsnrqylnhh~ky   24 (30)
T d2dlka1           3 CDFPGCGRIFSNRQYLNHHKKY   24 (30)
T ss_dssp             CSSTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCchhhhccHHHHHhHHHH
Confidence            5556777777777777777654

>d2yrka1 g.37.1.4 (A:8-55) Zinc finger homeobox protein 4, ZFHX4 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger homeobox protein 4, ZFHX4
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.96  E-value=0.32  Score=25.74  Aligned_cols=21  Identities=14%  Similarity=0.553  Sum_probs=14.6

Q ss_pred             ccCCCCCCCCCCCchhHHHHh
Q psy8793           8 YQCSQCPKAFNQKGNLKEHFR   28 (345)
Q Consensus         8 ~~C~~C~~~f~~~~~l~~H~~   28 (345)
                      -.|.+|+..|..+..++.|+.
T Consensus         7 ~eC~lC~vKYs~~~SvrdHiF   27 (48)
T d2yrka1           7 PECTLCGVKYSARLSIRDHIF   27 (48)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccCcccceeeeeecchHhhhh
Confidence            367777777777777777754

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.85  E-value=0.3  Score=23.29  Aligned_cols=26  Identities=19%  Similarity=0.579  Sum_probs=20.8

Q ss_pred             cccccccCccccchHhHHHHhhhhcC
Q psy8793         181 TCTFENCTETFVESWAMRKHVRTCHN  206 (345)
Q Consensus       181 ~C~~~~C~~~f~~~~~l~~H~~~~~~  206 (345)
                      .|-|..|+..|.+...|..|+..-|-
T Consensus         3 nChW~~C~~eFdtQd~LV~HinndHI   28 (32)
T d2glia1           3 DCRWDGCSQEFDSQEQLVHHINSEHI   28 (32)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHHHTS
T ss_pred             cccccccccccCCHHHHHHHcccccc
Confidence            46677899999999999998876543

>d1iroa_ g.41.5.1 (A:) Rubredoxin {Clostridium pasteurianum [TaxId: 1501]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubredoxin
species: Clostridium pasteurianum [TaxId: 1501]

Probab=84.68  E-value=0.18  Score=28.05  Aligned_cols=39  Identities=18%  Similarity=0.537  Sum_probs=23.4

Q ss_pred             CCccCCCCCCCCCCCchhHHH-Hh--hhcC--CCCccCCcCCcc
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEH-FR--IHTG--EKPFTCNICSRK   44 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H-~~--~h~~--~~~~~C~~C~~~   44 (345)
                      +.|.|.+|+..|.....-..+ +.  +--.  ...|.|++|+..
T Consensus         2 ~ky~C~~CgyiYd~~~Gd~~~gi~pGT~F~~LP~dw~CP~C~a~   45 (53)
T d1iroa_           2 KKYTCTVCGYIYNPEDGDPDNGVNPGTDFKDIPDDWVCPLCGVG   45 (53)
T ss_dssp             CCEEETTTCCEECTTTCBGGGTBCTTCCGGGSCTTCBCTTTCCB
T ss_pred             CCeEcCCCCcEECcccCCcccCCCCCCCHHHCCCCCCCcCCCCc
Confidence            368999999999754332222 11  1111  123899999864

>d1s24a_ g.41.5.1 (A:) Two-iron rubredoxin {Pseudomonas oleovorans [TaxId: 301]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Two-iron rubredoxin
species: Pseudomonas oleovorans [TaxId: 301]

Probab=82.47  E-value=0.16  Score=28.51  Aligned_cols=39  Identities=13%  Similarity=0.393  Sum_probs=22.4

Q ss_pred             CCccCCCCCCCCCCCchhHHH-Hh--h--hcCCCCccCCcCCcc
Q psy8793           6 KQYQCSQCPKAFNQKGNLKEH-FR--I--HTGEKPFTCNICSRK   44 (345)
Q Consensus         6 ~~~~C~~C~~~f~~~~~l~~H-~~--~--h~~~~~~~C~~C~~~   44 (345)
                      +.|.|.+|+..|.....-..+ +.  +  ..-...|.|++|+..
T Consensus         3 kky~C~~CgyiYdp~~Gd~~~gi~pGT~F~~LP~dw~CP~C~a~   46 (56)
T d1s24a_           3 LKWICITCGHIYDEALGDEAEGFTPGTRFEDIPDDWCCPDCGAT   46 (56)
T ss_dssp             CEEEETTTTEEEETTSCCTTTTCCSCCCGGGCCTTCCCSSSCCC
T ss_pred             ccEECCCCCcEECcccCCcccCcCCCCChhhCCCCCCCcCCCCc
Confidence            579999999999643221111 11  0  111123899999763

>d1m36a_ g.37.1.2 (A:) Monocytic leukemia zinc finger protein Moz {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: Monocytic leukemia zinc finger protein Moz
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.30  E-value=0.82  Score=22.22  Aligned_cols=25  Identities=20%  Similarity=0.461  Sum_probs=18.1

Q ss_pred             CceeecCcCccccCChHHHHHHHHH
Q psy8793         266 NEIFKCTKCDKVFQHIQLLNRHQLV  290 (345)
Q Consensus       266 ~~~~~C~~C~~~f~~~~~l~~H~~~  290 (345)
                      ++-|.|.+|-+-..+...|.+|+..
T Consensus         5 pkLyiCEfCLKYmks~~~l~RH~~K   29 (33)
T d1m36a_           5 PKLYLCEFCLKYMKSRTILQQHMKK   29 (33)
T ss_dssp             CCCEECSSSCCEESCHHHHHHHHHH
T ss_pred             CeeeeehhhhhhhCCHHHHHHHHHh
Confidence            4557777787777777777777653