Psyllid ID: psy8966

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-----
Protein Sequence
VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCLSGRFRLF
Secondary Structure (PSIPRED)
ccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHccccccccccccccccccccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHccccEEccccccccEEccHHHHHHHcHHHHccccEEccccccccccccccccHHHHHHHHccccccccHccHHHHHHHHHHHHHHHccccEEccccccccEEccHHHHHHHcHHHHccccEEccccccccEEccHHHHHHHHHHHHccccEEccccccHccHHHHccc
Coil and Loop (DISEMBL)
vhlrihsgirpykcpveYCEKAFSTQYSRKAhirthtgekpyrcahefcsksfktsgdlqkhvrthtgkytpgpgidsrlivREDFVHLrihsgirpykcpveYCEKAFSTQYSRKAhirthtgekpyrcahefcsksfktsgdlqkhvrthtgkytaevpgsilDCLSGRFRLF
Flexible Loop (DISEMBL)
vhlrihsgirpykcpvEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQkhvrthtgkytpgpgidsrlIVREDFVHLRIhsgirpykcpVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRThtgkytaevpgsildclsgrfrlf
Low Complexity Region (SEG)
VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCLSGRFRLF
Disordered region (IsUnstruct)
****IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCLSGR****
Disordered Region (DISOPRED)
VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCLSGRFRLF
Disordered Region (DISEMBL)
VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCLSGRFRLF
Disordered Region (DISPRO)
VH***HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCLSG*****
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhoooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCLSGRFRLF
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	175	2.2.26 [Sep-21-2011]
Q91853	565	Zinc finger protein 143 O	N/A	N/A	0.777	0.240	0.5	5e-39
Q58DZ6	567	Zinc finger protein 143 O	yes	N/A	0.777	0.239	0.5	8e-39
O70230	638	Zinc finger protein 143 O	yes	N/A	0.777	0.213	0.487	1e-38
Q5XIU2	638	Zinc finger protein 143 O	yes	N/A	0.777	0.213	0.487	1e-38
P36508	570	Zinc finger protein 76 OS	yes	N/A	0.777	0.238	0.481	3e-38
P52747	638	Zinc finger protein 143 O	no	N/A	0.777	0.213	0.481	3e-38
Q8BMU0	568	Zinc finger protein 76 OS	no	N/A	0.777	0.239	0.481	4e-38
B4F7E9	568	Zinc finger protein 76 OS	no	N/A	0.777	0.239	0.475	3e-37
A6QQW0	613	Zinc finger protein 143 O	no	N/A	0.777	0.221	0.481	3e-37
Q1LYE3	623	Zinc finger protein 143 O	no	N/A	0.777	0.218	0.469	6e-35

>sp|Q91853|ZN143_XENLA Zinc finger protein 143 OS=Xenopus laevis GN=znf143 PE=1 SV=2

 Score =  160 bits (404), Expect = 5e-39,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 103/164 (62%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPYRC+ E C+KSFKTSGDLQ
Sbjct: 249 VHERSHTGDRPYQCDHGSCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKSFKTSGDLQ 308

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KHVRTHTG+                          RP+KCP E C ++F+T   RK HIR
Sbjct: 309 KHVRTHTGE--------------------------RPFKCPFEGCGRSFTTSNIRKVHIR 342

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C+   C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 343 THTGERPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 386

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.
Xenopus laevis (taxid: 8355)

>sp|Q58DZ6|ZN143_XENTR Zinc finger protein 143 OS=Xenopus tropicalis GN=znf143 PE=2 SV=2

 Score =  159 bits (402), Expect = 8e-39,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 103/164 (62%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPYRC+ E C+KSFKTSGDLQ
Sbjct: 249 VHERSHTGDRPYQCDHGGCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKSFKTSGDLQ 308

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KHVRTHTG+                          RP+KCP E C ++F+T   RK HIR
Sbjct: 309 KHVRTHTGE--------------------------RPFKCPFEGCGRSFTTSNIRKVHIR 342

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C+   C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 343 THTGERPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 386

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.

Xenopus tropicalis (taxid: 8364)

>sp|O70230|ZN143_MOUSE Zinc finger protein 143 OS=Mus musculus GN=Znf143 PE=1 SV=2

 Score =  158 bits (400), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 102/164 (62%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H RTHTGEKPYRC+ + C+KSFKTSGDLQ
Sbjct: 256 VHERSHTGDRPYQCEHSGCGKAFATGYGLKSHFRTHTGEKPYRCSEDNCTKSFKTSGDLQ 315

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KH+RTHTG+                          RP+KCP+E C ++F+T   RK HIR
Sbjct: 316 KHIRTHTGE--------------------------RPFKCPIEGCGRSFTTSNIRKVHIR 349

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C    C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 350 THTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 393

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Mus musculus (taxid: 10090)

>sp|Q5XIU2|ZN143_RAT Zinc finger protein 143 OS=Rattus norvegicus GN=Znf143 PE=2 SV=2

 Score =  158 bits (400), Expect = 1e-38,   Method: Compositional matrix adjust.
 Identities = 80/164 (48%), Positives = 102/164 (62%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H RTHTGEKPYRC+ + C+KSFKTSGDLQ
Sbjct: 256 VHERSHTGDRPYQCEHSGCGKAFATGYGLKSHFRTHTGEKPYRCSEDNCTKSFKTSGDLQ 315

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KH+RTHTG+                          RP+KCP+E C ++F+T   RK HIR
Sbjct: 316 KHIRTHTGE--------------------------RPFKCPIEGCGRSFTTSNIRKVHIR 349

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C    C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 350 THTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 393

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Rattus norvegicus (taxid: 10116)

>sp|P36508|ZNF76_HUMAN Zinc finger protein 76 OS=Homo sapiens GN=ZNF76 PE=2 SV=2

 Score =  157 bits (398), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 79/164 (48%), Positives = 100/164 (60%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct: 184 VHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQ 243

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KHVRTHTG+                          RP++CP E C ++F+T   RK H+R
Sbjct: 244 KHVRTHTGE--------------------------RPFQCPFEGCGRSFTTSNIRKVHVR 277

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C    C + F ++ + + HVR HTG+  Y   VPG
Sbjct: 278 THTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPG 321

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|P52747|ZN143_HUMAN Zinc finger protein 143 OS=Homo sapiens GN=ZNF143 PE=1 SV=2

 Score =  157 bits (398), Expect = 3e-38,   Method: Compositional matrix adjust.
 Identities = 79/164 (48%), Positives = 102/164 (62%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPYRC+ + C+KSFKTSGDLQ
Sbjct: 256 VHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPYRCSEDNCTKSFKTSGDLQ 315

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KH+RTHTG+                          RP+KCP E C ++F+T   RK H+R
Sbjct: 316 KHIRTHTGE--------------------------RPFKCPFEGCGRSFTTSNIRKVHVR 349

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C    C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 350 THTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 393

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Homo sapiens (taxid: 9606)

>sp|Q8BMU0|ZNF76_MOUSE Zinc finger protein 76 OS=Mus musculus GN=Znf76 PE=2 SV=1

 Score =  157 bits (396), Expect = 4e-38,   Method: Compositional matrix adjust.
 Identities = 79/164 (48%), Positives = 100/164 (60%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct: 184 VHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQ 243

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KHVRTHTG+                          RP++CP E C ++F+T   RK H+R
Sbjct: 244 KHVRTHTGE--------------------------RPFRCPFEGCGRSFTTSNIRKVHVR 277

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C    C + F ++ + + HVR HTG+  Y   VPG
Sbjct: 278 THTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPG 321

May be involved in transcriptional regulation.

Mus musculus (taxid: 10090)

>sp|B4F7E9|ZNF76_RAT Zinc finger protein 76 OS=Rattus norvegicus GN=Znf76 PE=2 SV=1

 Score =  154 bits (388), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 78/164 (47%), Positives = 99/164 (60%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G R Y+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct: 184 VHERAHTGDRSYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQ 243

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KHVRTHTG+                          RP++CP E C ++F+T   RK H+R
Sbjct: 244 KHVRTHTGE--------------------------RPFRCPFEGCGRSFTTSNIRKVHVR 277

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C    C + F ++ + + HVR HTG+  Y   VPG
Sbjct: 278 THTGERPYTCPEPHCGRGFTSATNYKNHVRIHTGEKPYVCTVPG 321

May be involved in transcriptional regulation.

Rattus norvegicus (taxid: 10116)

>sp|A6QQW0|ZN143_BOVIN Zinc finger protein 143 OS=Bos taurus GN=ZNF143 PE=2 SV=1

 Score =  154 bits (388), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 79/164 (48%), Positives = 101/164 (61%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPYRC+ + C+KSFKTSGDLQ
Sbjct: 231 VHERSHTGDRPYQCEHAGCGKAFATGYGLKSHVRTHTGEKPYRCSEDNCTKSFKTSGDLQ 290

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KH+RTHTG+                          RP+KC  E C ++F+T   RK HIR
Sbjct: 291 KHIRTHTGE--------------------------RPFKCHFEGCGRSFTTSNIRKVHIR 324

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C    C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 325 THTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 368

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the SPH motif of small nuclear RNA (snRNA) gene promoters. Participates in efficient U6 RNA polymerase III transcription via its interaction with CHD8.

Bos taurus (taxid: 9913)

>sp|Q1LYE3|ZN143_DANRE Zinc finger protein 143 OS=Danio rerio GN=znf143 PE=2 SV=2

 Score =  146 bits (369), Expect = 6e-35,   Method: Compositional matrix adjust.
 Identities = 77/164 (46%), Positives = 97/164 (59%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G +PY C    C K F+T Y  K+H+RTHTGEKPYRC    C KSFKTSGDLQ
Sbjct: 249 VHERSHTGDKPYICDHLGCGKKFATGYGLKSHVRTHTGEKPYRCQELNCLKSFKTSGDLQ 308

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KH RTHTG+                          +P+KCP E C ++F+T   RK HIR
Sbjct: 309 KHTRTHTGE--------------------------KPFKCPFEGCGRSFTTSNIRKVHIR 342

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY CA   C ++F ++ + + H+R HTG+  Y   VPG
Sbjct: 343 THTGERPYYCAEPNCGRAFASATNYKNHMRIHTGEKPYVCTVPG 386

Transcriptional activator. Activates the gene for selenocysteine tRNA (tRNAsec). Binds to the activator element (AE) motif of the selenocysteine tRNA gene promoter.

Danio rerio (taxid: 7955)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
443686655	662	hypothetical protein CAPTEDRAFT_223732 [	0.862	0.228	0.528	6e-39
198430617	704	PREDICTED: similar to zinc finger protei	0.737	0.183	0.503	1e-37
405954239	649	hypothetical protein CGI_10003391 [Crass	0.737	0.198	0.496	2e-37
148223786	600	zinc finger protein 143 [Xenopus laevis]	0.777	0.226	0.5	2e-37
229892180	565	RecName: Full=Zinc finger protein 143; A	0.777	0.240	0.5	2e-37
363734708	637	PREDICTED: zinc finger protein 143 [Gall	0.777	0.213	0.5	3e-37
326920006	637	PREDICTED: zinc finger protein 143-like	0.777	0.213	0.5	3e-37
229892181	567	RecName: Full=Zinc finger protein 143; A	0.777	0.239	0.5	4e-37
71895897	555	zinc finger protein 143 [Xenopus (Silura	0.777	0.245	0.5	4e-37
47507273	507	Staf protein [Xenopus laevis]	0.777	0.268	0.5	5e-37

>gi|443686655|gb|ELT89849.1| hypothetical protein CAPTEDRAFT_223732 [Capitella teleta]

 Score =  165 bits (418), Expect = 6e-39,   Method: Composition-based stats.
 Identities = 84/159 (52%), Positives = 98/159 (61%), Gaps = 8/159 (5%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPYKC    C KAF+T Y  K HIR HTGEKPY C    CSK+FKTSGDLQ
Sbjct: 293 VHERSHTGDRPYKCEYAGCNKAFATNYGLKGHIRVHTGEKPYECPDVNCSKAFKTSGDLQ 352

Query: 61  KHVRTHTGK---YTPGPGIDSRLI---VREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYS 114
           KH+RTHTG+     P  G D       +R+  VH+R H+G+RPY CP   C KAFS+  +
Sbjct: 353 KHIRTHTGEKPFKCPFEGCDRYFTTSNIRK--VHIRTHTGLRPYVCPENGCNKAFSSATN 410

Query: 115 RKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 153
            K H+R HTGEKPY C  + C K F     L KH   HT
Sbjct: 411 YKNHVRIHTGEKPYVCTVQGCGKRFTEYSSLYKHHVVHT 449

Source: Capitella teleta

Species: Capitella teleta

Genus: Capitella

Family: Capitellidae

Order: Capitellida

Class: Polychaeta

Phylum: Annelida

Superkingdom: Eukaryota

>gi|198430617|ref|XP_002127297.1| PREDICTED: similar to zinc finger protein 523 [Ciona intestinalis]

 Score =  160 bits (406), Expect = 1e-37,   Method: Composition-based stats.
 Identities = 78/155 (50%), Positives = 95/155 (61%), Gaps = 26/155 (16%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R+H+G +PYKC  + CEK F T YS K+H R HTGEKPY C H  CSK+FKT+GDLQ
Sbjct: 135 VHKRVHTGEKPYKCNWKNCEKVFMTSYSLKSHHRVHTGEKPYPCPHTSCSKAFKTAGDLQ 194

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KH+RTHTG+                          +P+KCP E CEKAF+T    K HIR
Sbjct: 195 KHIRTHTGE--------------------------KPFKCPFEGCEKAFTTSNICKVHIR 228

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           THTGE+PY C +E C KSF    + + H R HTG+
Sbjct: 229 THTGERPYTCPYEDCKKSFSNITNYRNHTRIHTGE 263

Source: Ciona intestinalis

Species: Ciona intestinalis

Genus: Ciona

Family: Cionidae

Order: Enterogona

Class: Ascidiacea

Phylum: Chordata

Superkingdom: Eukaryota

>gi|405954239|gb|EKC21736.1| hypothetical protein CGI_10003391 [Crassostrea gigas]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 77/155 (49%), Positives = 97/155 (62%), Gaps = 26/155 (16%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G+RP+KC  E C KAF+T Y  K+H R HTGEKPY+C  E C K FKTSGDLQ
Sbjct: 284 VHERSHTGVRPFKCDYEGCGKAFATGYGLKSHTRVHTGEKPYKCPEEGCDKGFKTSGDLQ 343

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KHVRTHTG+                          RP+KCP E CE++F+T   RK HIR
Sbjct: 344 KHVRTHTGE--------------------------RPFKCPFEGCERSFTTSNIRKVHIR 377

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           THTGE+PY C  E C ++F ++ + + H+R HTG+
Sbjct: 378 THTGERPYICNEEGCGRAFASATNYKNHIRIHTGE 412

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

>gi|148223786|ref|NP_001084373.1| zinc finger protein 143 [Xenopus laevis] gi|940879|emb|CAA59354.1| selenocysteine tRNA activating factor [Xenopus laevis]

 Score =  160 bits (405), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 103/164 (62%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPYRC+ E C+KSFKTSGDLQ
Sbjct: 284 VHERSHTGDRPYQCDHGSCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKSFKTSGDLQ 343

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KHVRTHTG+                          RP+KCP E C ++F+T   RK HIR
Sbjct: 344 KHVRTHTGE--------------------------RPFKCPFEGCGRSFTTSNIRKVHIR 377

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C+   C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 378 THTGERPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 421

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|229892180|sp|Q91853.2|ZN143_XENLA RecName: Full=Zinc finger protein 143; AltName: Full=Selenocysteine tRNA gene transcription-activating factor

 Score =  160 bits (404), Expect = 2e-37,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 103/164 (62%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPYRC+ E C+KSFKTSGDLQ
Sbjct: 249 VHERSHTGDRPYQCDHGSCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKSFKTSGDLQ 308

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KHVRTHTG+                          RP+KCP E C ++F+T   RK HIR
Sbjct: 309 KHVRTHTGE--------------------------RPFKCPFEGCGRSFTTSNIRKVHIR 342

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C+   C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 343 THTGERPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 386

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|363734708|ref|XP_426401.3| PREDICTED: zinc finger protein 143 [Gallus gallus]

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 101/164 (61%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+HIRTHTGEKPYRC  E C+KSFKTSGDLQ
Sbjct: 255 VHERSHTGDRPYQCEHPGCGKAFATGYGLKSHIRTHTGEKPYRCTEENCTKSFKTSGDLQ 314

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KH+RTHTG+                          RP+KCP E C ++F+T   RK HIR
Sbjct: 315 KHIRTHTGE--------------------------RPFKCPFEGCGRSFTTSNIRKVHIR 348

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C    C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 349 THTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 392

Source: Gallus gallus

Species: Gallus gallus

Genus: Gallus

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|326920006|ref|XP_003206267.1| PREDICTED: zinc finger protein 143-like [Meleagris gallopavo]

 Score =  159 bits (403), Expect = 3e-37,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 101/164 (61%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+HIRTHTGEKPYRC  E C+KSFKTSGDLQ
Sbjct: 255 VHERSHTGDRPYQCEHPGCGKAFATGYGLKSHIRTHTGEKPYRCTEENCTKSFKTSGDLQ 314

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KH+RTHTG+                          RP+KCP E C ++F+T   RK HIR
Sbjct: 315 KHIRTHTGE--------------------------RPFKCPFEGCGRSFTTSNIRKVHIR 348

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C    C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 349 THTGERPYYCTEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 392

Source: Meleagris gallopavo

Species: Meleagris gallopavo

Genus: Meleagris

Family: Phasianidae

Order: Galliformes

Class: Aves

Phylum: Chordata

Superkingdom: Eukaryota

>gi|229892181|sp|Q58DZ6.2|ZN143_XENTR RecName: Full=Zinc finger protein 143; AltName: Full=Selenocysteine tRNA gene transcription-activating factor

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 103/164 (62%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPYRC+ E C+KSFKTSGDLQ
Sbjct: 249 VHERSHTGDRPYQCDHGGCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKSFKTSGDLQ 308

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KHVRTHTG+                          RP+KCP E C ++F+T   RK HIR
Sbjct: 309 KHVRTHTGE--------------------------RPFKCPFEGCGRSFTTSNIRKVHIR 342

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C+   C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 343 THTGERPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 386

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|71895897|ref|NP_001025654.1| zinc finger protein 143 [Xenopus (Silurana) tropicalis] gi|62027600|gb|AAH92134.1| zinc finger protein 143 [Xenopus (Silurana) tropicalis]

 Score =  159 bits (402), Expect = 4e-37,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 103/164 (62%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPYRC+ E C+KSFKTSGDLQ
Sbjct: 237 VHERSHTGDRPYQCDHGGCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKSFKTSGDLQ 296

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KHVRTHTG+                          RP+KCP E C ++F+T   RK HIR
Sbjct: 297 KHVRTHTGE--------------------------RPFKCPFEGCGRSFTTSNIRKVHIR 330

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C+   C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 331 THTGERPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 374

Source: Xenopus (Silurana) tropicalis

Species: Xenopus (Silurana) tropicalis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|47507273|gb|AAH71051.1| Staf protein [Xenopus laevis]

 Score =  159 bits (401), Expect = 5e-37,   Method: Compositional matrix adjust.
 Identities = 82/164 (50%), Positives = 103/164 (62%), Gaps = 28/164 (17%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPYRC+ E C+KSFKTSGDLQ
Sbjct: 237 VHERSHTGDRPYQCDHGSCRKAFATGYGLKSHVRTHTGEKPYRCSEENCTKSFKTSGDLQ 296

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KHVRTHTG+                          RP+KCP E C ++F+T   RK HIR
Sbjct: 297 KHVRTHTGE--------------------------RPFKCPFEGCGRSFTTSNIRKVHIR 330

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK--YTAEVPG 162
           THTGE+PY C+   C ++F ++ + + HVR HTG+  Y   VPG
Sbjct: 331 THTGERPYYCSEPGCGRAFASATNYKNHVRIHTGEKPYVCTVPG 374

Source: Xenopus laevis

Species: Xenopus laevis

Genus: Xenopus

Family: Pipidae

Order: Anura

Class: Amphibia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	175
UNIPROTKB|P36508	570	ZNF76 "Zinc finger protein 76"	0.92	0.282	0.502	1.2e-40
UNIPROTKB|Q5R3B9	544	ZNF76 "Zinc finger protein 76"	0.92	0.295	0.502	1.2e-40
UNIPROTKB|E2RAQ6	570	ZNF76 "Uncharacterized protein	0.92	0.282	0.502	1.6e-40
UNIPROTKB|F1RZ10	546	ZNF76 "Uncharacterized protein	0.92	0.294	0.502	1.6e-40
MGI|MGI:2687278	568	Zfp523 "zinc finger protein 52	0.92	0.283	0.502	2.6e-40
UNIPROTKB|F1LNL6	568	Zfp523 "Zinc finger protein 76	0.92	0.283	0.502	2.6e-40
UNIPROTKB|E1BND9	571	ZNF76 "Uncharacterized protein	0.92	0.281	0.502	2.6e-40
UNIPROTKB|E7EX64	340	ZNF76 "Zinc finger protein 76"	0.868	0.447	0.512	1.4e-39
RGD|1306239	568	Zfp523 "zinc finger protein 52	0.92	0.283	0.497	1.8e-39
ZFIN|ZDB-GENE-061027-379	516	zgc:153635 "zgc:153635" [Danio	0.891	0.302	0.518	2.9e-39

UNIPROTKB|P36508 ZNF76 "Zinc finger protein 76" [Homo sapiens (taxid:9606)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 85/169 (50%), Positives = 102/169 (60%)

Query:     1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
             VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct:   184 VHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQ 243

Query:    61 KHVRTHTGK---YTPGPGIDSRLIVREDF--VHLRIHSGIRPYKCPVEYCEKAFSTQYSR 115
             KHVRTHTG+     P  G   R     +   VH+R H+G RPY CP  +C + F++  + 
Sbjct:   244 KHVRTHTGERPFQCPFEGC-GRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNY 302

Query:   116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH--VRTHTGKYTAEVPG 162
             K H+R HTGEKPY C    C K F     L KH  V TH   YT    G
Sbjct:   303 KNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCG 351

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006357 "regulation of transcription from RNA polymerase II promoter" evidence=TAS

GO:0006359 "regulation of transcription from RNA polymerase III promoter" evidence=TAS

UNIPROTKB|Q5R3B9 ZNF76 "Zinc finger protein 76" [Homo sapiens (taxid:9606)]

 Score = 432 (157.1 bits), Expect = 1.2e-40, P = 1.2e-40
 Identities = 85/169 (50%), Positives = 102/169 (60%)

Query:     1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
             VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct:   158 VHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQ 217

Query:    61 KHVRTHTGK---YTPGPGIDSRLIVREDF--VHLRIHSGIRPYKCPVEYCEKAFSTQYSR 115
             KHVRTHTG+     P  G   R     +   VH+R H+G RPY CP  +C + F++  + 
Sbjct:   218 KHVRTHTGERPFQCPFEGC-GRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNY 276

Query:   116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH--VRTHTGKYTAEVPG 162
             K H+R HTGEKPY C    C K F     L KH  V TH   YT    G
Sbjct:   277 KNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCG 325

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2RAQ6 ZNF76 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 85/169 (50%), Positives = 102/169 (60%)

Query:     1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
             VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct:   184 VHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQ 243

Query:    61 KHVRTHTGKYT---PGPGIDSRLIVREDF--VHLRIHSGIRPYKCPVEYCEKAFSTQYSR 115
             KHVRTHTG+     P  G   R     +   VH+R H+G RPY CP  +C + F++  + 
Sbjct:   244 KHVRTHTGERPFRCPFEGC-GRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNY 302

Query:   116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH--VRTHTGKYTAEVPG 162
             K H+R HTGEKPY C    C K F     L KH  V TH   YT    G
Sbjct:   303 KNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCG 351

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|F1RZ10 ZNF76 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 431 (156.8 bits), Expect = 1.6e-40, P = 1.6e-40
 Identities = 85/169 (50%), Positives = 102/169 (60%)

Query:     1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
             VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct:   160 VHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQ 219

Query:    61 KHVRTHTGKYT---PGPGIDSRLIVREDF--VHLRIHSGIRPYKCPVEYCEKAFSTQYSR 115
             KHVRTHTG+     P  G   R     +   VH+R H+G RPY CP  +C + F++  + 
Sbjct:   220 KHVRTHTGERPFRCPFEGC-GRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNY 278

Query:   116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH--VRTHTGKYTAEVPG 162
             K H+R HTGEKPY C    C K F     L KH  V TH   YT    G
Sbjct:   279 KNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCG 327

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

MGI|MGI:2687278 Zfp523 "zinc finger protein 523" [Mus musculus (taxid:10090)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 85/169 (50%), Positives = 102/169 (60%)

Query:     1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
             VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct:   184 VHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQ 243

Query:    61 KHVRTHTGKYT---PGPGIDSRLIVREDF--VHLRIHSGIRPYKCPVEYCEKAFSTQYSR 115
             KHVRTHTG+     P  G   R     +   VH+R H+G RPY CP  +C + F++  + 
Sbjct:   244 KHVRTHTGERPFRCPFEGC-GRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNY 302

Query:   116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH--VRTHTGKYTAEVPG 162
             K H+R HTGEKPY C    C K F     L KH  V TH   YT    G
Sbjct:   303 KNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSSCG 351

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008150 "biological_process" evidence=ND

GO:0008270 "zinc ion binding" evidence=IEA

GO:0046872 "metal ion binding" evidence=IEA

UNIPROTKB|F1LNL6 Zfp523 "Zinc finger protein 76" [Rattus norvegicus (taxid:10116)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 85/169 (50%), Positives = 102/169 (60%)

Query:     1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
             VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct:   184 VHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQ 243

Query:    61 KHVRTHTGKYT---PGPGIDSRLIVREDF--VHLRIHSGIRPYKCPVEYCEKAFSTQYSR 115
             KHVRTHTG+     P  G   R     +   VH+R H+G RPY CP  +C + F++  + 
Sbjct:   244 KHVRTHTGERPFRCPFEGC-GRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNY 302

Query:   116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH--VRTHTGKYTAEVPG 162
             K H+R HTGEKPY C    C K F     L KH  V TH   YT    G
Sbjct:   303 KNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSSCG 351

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E1BND9 ZNF76 "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 429 (156.1 bits), Expect = 2.6e-40, P = 2.6e-40
 Identities = 85/169 (50%), Positives = 102/169 (60%)

Query:     1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
             VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct:   185 VHERAHTGDRPYRCDFPSCGKAFATGYGLKSHMRTHTGEKPYKCPEELCSKAFKTSGDLQ 244

Query:    61 KHVRTHTGKYT---PGPGIDSRLIVREDF--VHLRIHSGIRPYKCPVEYCEKAFSTQYSR 115
             KHVRTHTG+     P  G   R     +   VH+R H+G RPY CP  +C + F++  + 
Sbjct:   245 KHVRTHTGERPFRCPFEGC-GRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNY 303

Query:   116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH--VRTHTGKYTAEVPG 162
             K H+R HTGEKPY C    C K F     L KH  V TH   YT    G
Sbjct:   304 KNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSTCG 352

GO:0008270 "zinc ion binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

UNIPROTKB|E7EX64 ZNF76 "Zinc finger protein 76" [Homo sapiens (taxid:9606)]

 Score = 422 (153.6 bits), Expect = 1.4e-39, P = 1.4e-39
 Identities = 81/158 (51%), Positives = 98/158 (62%)

Query:     1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
             VH R H+G RPY+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct:   184 VHERAHTGDRPYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQ 243

Query:    61 KHVRTHTGK---YTPGPGIDSRLIVREDF--VHLRIHSGIRPYKCPVEYCEKAFSTQYSR 115
             KHVRTHTG+     P  G   R     +   VH+R H+G RPY CP  +C + F++  + 
Sbjct:   244 KHVRTHTGERPFQCPFEGC-GRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNY 302

Query:   116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 153
             K H+R HTGEKPY C    C K F     L KH   HT
Sbjct:   303 KNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHT 340

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

RGD|1306239 Zfp523 "zinc finger protein 523" [Rattus norvegicus (taxid:10116)]

 Score = 421 (153.3 bits), Expect = 1.8e-39, P = 1.8e-39
 Identities = 84/169 (49%), Positives = 101/169 (59%)

Query:     1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
             VH R H+G R Y+C    C KAF+T Y  K+H+RTHTGEKPY+C  E CSK+FKTSGDLQ
Sbjct:   184 VHERAHTGDRSYRCDFPSCGKAFATGYGLKSHVRTHTGEKPYKCPEELCSKAFKTSGDLQ 243

Query:    61 KHVRTHTGKYT---PGPGIDSRLIVREDF--VHLRIHSGIRPYKCPVEYCEKAFSTQYSR 115
             KHVRTHTG+     P  G   R     +   VH+R H+G RPY CP  +C + F++  + 
Sbjct:   244 KHVRTHTGERPFRCPFEGC-GRSFTTSNIRKVHVRTHTGERPYTCPEPHCGRGFTSATNY 302

Query:   116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH--VRTHTGKYTAEVPG 162
             K H+R HTGEKPY C    C K F     L KH  V TH   YT    G
Sbjct:   303 KNHVRIHTGEKPYVCTVPGCGKRFTEYSSLYKHHVVHTHCKPYTCSSCG 351

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

ZFIN|ZDB-GENE-061027-379 zgc:153635 "zgc:153635" [Danio rerio (taxid:7955)]

 Score = 419 (152.6 bits), Expect = 2.9e-39, P = 2.9e-39
 Identities = 85/164 (51%), Positives = 100/164 (60%)

Query:     1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
             VH R H+G RPY+C V  C KAF+T Y  K+H RTHTGEKPY+C  + C K+FKTSGDLQ
Sbjct:   187 VHERSHTGDRPYRCEVHSCGKAFATGYGLKSHQRTHTGEKPYKCPEDMCYKAFKTSGDLQ 246

Query:    61 KHVRTHTGKYT---PGPGIDSRLIVREDF--VHLRIHSGIRPYKCPVEYCEKAFSTQYSR 115
             KHVRTHTG+     P  G   R     +   VH R H+G RPY CP   C +AF++  + 
Sbjct:   247 KHVRTHTGEKPFKCPFEGC-GRSFTTSNIRKVHTRTHTGERPYLCPEPSCGRAFASATNY 305

Query:   116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH--VRTHTGKYT 157
             K H+R HTGEKPY C    C KSF     L KH  V TH   YT
Sbjct:   306 KNHMRIHTGEKPYLCTVPGCGKSFTEYSSLYKHHVVHTHCKPYT 349

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008150 "biological_process" evidence=ND

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

No confident hit for EC number transfering in SWISSPROT detected by BLAST

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	175
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	7e-07
COG5189	423	COG5189, SFP1, Putative transcriptional repressor	7e-07
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	1e-05
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	2e-04
COG5048	467	COG5048, COG5048, FOG: Zn-finger [General function	2e-04

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 47.8 bits (113), Expect = 7e-07
 Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 24/80 (30%)

Query: 8   GIRPYKCPVEYCEKAFSTQYSRKAHIRTH--------------------TGEKPYRCAHE 47
             +PYKCPVE C K +  Q   K H   H                      +KPYRC  E
Sbjct: 346 DGKPYKCPVEGCNKKYKNQNGLKYH-MLHGHQNQKLHENPSPEKMNIFSAKDKPYRC--E 402

Query: 48  FCSKSFKTSGDLQKHVRTHT 67
            C K +K    L+ H R H+
Sbjct: 403 VCDKRYKNLNGLKYH-RKHS 421

Length = 423

>gnl|CDD|227516 COG5189, SFP1, Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

 Score = 47.8 bits (113), Expect = 7e-07
 Identities = 26/80 (32%), Positives = 32/80 (40%), Gaps = 24/80 (30%)

Query: 94  GIRPYKCPVEYCEKAFSTQYSRKAHIRTH--------------------TGEKPYRCAHE 133
             +PYKCPVE C K +  Q   K H   H                      +KPYRC  E
Sbjct: 346 DGKPYKCPVEGCNKKYKNQNGLKYH-MLHGHQNQKLHENPSPEKMNIFSAKDKPYRC--E 402

Query: 134 FCSKSFKTSGDLQKHVRTHT 153
            C K +K    L+ H R H+
Sbjct: 403 VCDKRYKNLNGLKYH-RKHS 421

Length = 423

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 44.3 bits (104), Expect = 1e-05
 Identities = 37/150 (24%), Positives = 53/150 (35%), Gaps = 27/150 (18%)

Query: 7   SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 66
             ++P+ CP   C K FS   + K HI  HT   P +                       
Sbjct: 317 ESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKE---------------------- 354

Query: 67  TGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYK---CPVEYCEKAFSTQYSRKAHIRTHT 123
             K        S L+  E    L+ +  ++  K        C + F    +   HI TH 
Sbjct: 355 --KLLNSSSKFSPLLNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHL 412

Query: 124 GEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 153
             +PY C +  CSKSF    +L  H + HT
Sbjct: 413 SFRPYNCKNPPCSKSFNRHYNLIPHKKIHT 442

Length = 467

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 67
          RP  CP   C  +FS       HIR+HTGEKP +C++  C KSF    +L +H+RTH 
Sbjct: 32 RPDSCP--NCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHH 87

Length = 467

>gnl|CDD|227381 COG5048, COG5048, FOG: Zn-finger [General function prediction only]

 Score = 40.8 bits (95), Expect = 2e-04
 Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 2/58 (3%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 153
           RP  CP   C  +FS       HIR+HTGEKP +C++  C KSF    +L +H+RTH 
Sbjct: 32  RPDSCP--NCTDSFSRLEHLTRHIRSHTGEKPSQCSYSGCDKSFSRPLELSRHLRTHH 87

Length = 467

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	175
KOG2462|consensus	279		99.95
KOG2462|consensus	279		99.88
KOG3608|consensus	467		99.81
KOG1074|consensus	958		99.77
KOG3608|consensus	467		99.75
KOG3576|consensus	267		99.67
KOG1074|consensus	958		99.63
KOG3623|consensus	1007		99.57
KOG3576|consensus	267		99.53
KOG3623|consensus	1007		99.51
PHA00733	128	hypothetical protein	99.04
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.97
PLN03086	567	PRLI-interacting factor K; Provisional	98.97
PHA02768	55	hypothetical protein; Provisional	98.89
PHA02768	55	hypothetical protein; Provisional	98.89
PLN03086	567	PRLI-interacting factor K; Provisional	98.79
PHA00616	44	hypothetical protein	98.75
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.74
PHA00733	128	hypothetical protein	98.71
KOG3993|consensus	500		98.61
PHA00616	44	hypothetical protein	98.41
PHA00732	79	hypothetical protein	98.14
PHA00732	79	hypothetical protein	98.1
KOG3993|consensus	500		98.08
COG5189	423	SFP1 Putative transcriptional repressor regulating	98.02
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.99
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.96
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.64
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.61
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.56
smart00355	26	ZnF_C2H2 zinc finger.	97.25
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	97.24
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.2
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.17
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.16
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.1
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.01
PRK04860	160	hypothetical protein; Provisional	96.89
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	96.52
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.47
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.46
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.37
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.2
smart00355	26	ZnF_C2H2 zinc finger.	96.14
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.04
PRK04860	160	hypothetical protein; Provisional	95.91
COG5048	467	FOG: Zn-finger [General function prediction only]	95.22
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.05
KOG4173|consensus	253		94.84
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	94.33
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.1
KOG1146|consensus	1406		92.9
COG5236	493	Uncharacterized conserved protein, contains RING Z	92.16
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	92.15
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.55
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	91.47
COG5236	493	Uncharacterized conserved protein, contains RING Z	90.55
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	90.23
COG1592	166	Rubrerythrin [Energy production and conversion]	90.22
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	89.83
COG5048	467	FOG: Zn-finger [General function prediction only]	89.1
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	88.56
KOG2893|consensus	341		88.11
KOG2893|consensus	341		87.65
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	86.69
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	85.6
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	84.75
COG4049	65	Uncharacterized protein containing archaeal-type C	84.09
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	83.42
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	82.86
PHA00626	59	hypothetical protein	82.32
KOG1146|consensus	1406		81.68
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	80.91
COG4049	65	Uncharacterized protein containing archaeal-type C	80.76
PRK06266	178	transcription initiation factor E subunit alpha; V	80.11
PF07754	24	DUF1610: Domain of unknown function (DUF1610); Int	80.07

>KOG2462|consensus

Probab=99.95  E-value=2.4e-28  Score=167.18  Aligned_cols=123  Identities=38%  Similarity=0.737  Sum_probs=108.8

Q ss_pred             CCccCCCccchhhccChHHHHHHHhhhcC---CCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccc
Q psy8966          10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTG---EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDF   86 (175)
Q Consensus        10 ~~~~C~~~~C~~~f~~~~~L~~h~~~~~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~   86 (175)
                      ..|.|.  .||+.|...++|.+|..+|..   .+.+.|..  |++.|.+..+|..|+++|.-                  
T Consensus       129 ~r~~c~--eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~--C~K~YvSmpALkMHirTH~l------------------  186 (279)
T KOG2462|consen  129 PRYKCP--ECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKY--CGKVYVSMPALKMHIRTHTL------------------  186 (279)
T ss_pred             Cceecc--ccccccccccccchhhcccccccccccccCCC--CCceeeehHHHhhHhhccCC------------------
Confidence            358897  899999999999999999854   45699965  99999999999999999862                  


Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchhh
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILD  166 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~~  166 (175)
                                +.+|+  .||+.|....-|+.|+++|+|||||.|  +.|+++|..+++|+.||++|.+.++|.|+.|+++
T Consensus       187 ----------~c~C~--iCGKaFSRPWLLQGHiRTHTGEKPF~C--~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~Ks  252 (279)
T KOG2462|consen  187 ----------PCECG--ICGKAFSRPWLLQGHIRTHTGEKPFSC--PHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKS  252 (279)
T ss_pred             ----------Ccccc--cccccccchHHhhcccccccCCCCccC--CcccchhcchHHHHHHHHhhcCCccccCcchhhH
Confidence                      56776  899999999999999999999999999  7799999999999999999999999999999988


Q ss_pred             hc
Q psy8966         167 CL  168 (175)
Q Consensus       167 ~~  168 (175)
                      |.
T Consensus       253 Fs  254 (279)
T KOG2462|consen  253 FA  254 (279)
T ss_pred             HH
Confidence            85

>KOG2462|consensus

Probab=99.88  E-value=9e-23  Score=140.00  Aligned_cols=107  Identities=41%  Similarity=0.796  Sum_probs=97.3

Q ss_pred             CCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchh
Q psy8966           9 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVH   88 (175)
Q Consensus         9 ~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~   88 (175)
                      .+-+.|.  .||++|.+...|+.|+++|.  .+++|..  ||+.|...=-|+.|+++|+|                    
T Consensus       159 ~ka~~C~--~C~K~YvSmpALkMHirTH~--l~c~C~i--CGKaFSRPWLLQGHiRTHTG--------------------  212 (279)
T KOG2462|consen  159 KKAFSCK--YCGKVYVSMPALKMHIRTHT--LPCECGI--CGKAFSRPWLLQGHIRTHTG--------------------  212 (279)
T ss_pred             cccccCC--CCCceeeehHHHhhHhhccC--CCccccc--ccccccchHHhhcccccccC--------------------
Confidence            5568897  99999999999999999997  5799955  99999988888888777665                    


Q ss_pred             hhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHH
Q psy8966          89 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT  151 (175)
Q Consensus        89 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  151 (175)
                            ||||.|+  .|++.|.+.++|..|+.+|.+.|+|.|  ..|+|.|..++.|..|..+
T Consensus       213 ------EKPF~C~--hC~kAFADRSNLRAHmQTHS~~K~~qC--~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  213 ------EKPFSCP--HCGKAFADRSNLRAHMQTHSDVKKHQC--PRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ------CCCccCC--cccchhcchHHHHHHHHhhcCCccccC--cchhhHHHHHHHHHHhhhh
Confidence                  8899998  899999999999999999999999999  8899999999999999865

>KOG3608|consensus

Probab=99.81  E-value=4.2e-20  Score=130.68  Aligned_cols=160  Identities=27%  Similarity=0.457  Sum_probs=113.5

Q ss_pred             CCCCC-ccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHH---------------------
Q psy8966           7 SGIRP-YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVR---------------------   64 (175)
Q Consensus         7 ~~~~~-~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~---------------------   64 (175)
                      .+++| +.|.|..|-..+.++..|++|+++|++++...|+.  ||..|.....|..|++                     
T Consensus       172 ~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~--Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaT  249 (467)
T KOG3608|consen  172 EDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPH--CGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFAT  249 (467)
T ss_pred             CCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecch--HHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhH
Confidence            34444 55666677777777777777777776666666654  6666666666655554                     


Q ss_pred             ---------HhcCCCCCCCCCCccchhcccchhhh-hccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCccc
Q psy8966          65 ---------THTGKYTPGPGIDSRLIVREDFVHLR-IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEF  134 (175)
Q Consensus        65 ---------~h~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~  134 (175)
                               .|..-..|--+.......+++..|++ .|...+||+|.  .|++.+...++|+.|..+|. +..|.|.++.
T Consensus       250 eklL~~Hv~rHvn~ykCplCdmtc~~~ssL~~H~r~rHs~dkpfKCd--~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~  326 (467)
T KOG3608|consen  250 EKLLKSHVVRHVNCYKCPLCDMTCSSASSLTTHIRYRHSKDKPFKCD--ECDTRCVRESDLAKHVQVHS-KTVYQCEHPD  326 (467)
T ss_pred             HHHHHHHHHHhhhcccccccccCCCChHHHHHHHHhhhccCCCcccc--chhhhhccHHHHHHHHHhcc-ccceecCCCC
Confidence                     34333323222223333334445655 46779999995  89999999999999999996 7789996666


Q ss_pred             chHHHhchhhHHHHHHHhc-C--CccccCCcchhhhcccc
Q psy8966         135 CSKSFKTSGDLQKHVRTHT-G--KYTAEVPGSILDCLSGR  171 (175)
Q Consensus       135 C~~~f~~~~~l~~H~~~h~-~--~~~~~C~~c~~~~~~~~  171 (175)
                      |.+++++...|.+|++.++ |  +.+|.|..|.+.|.+|.
T Consensus       327 C~~s~r~~~q~~~H~~evhEg~np~~Y~CH~Cdr~ft~G~  366 (467)
T KOG3608|consen  327 CHYSVRTYTQMRRHFLEVHEGNNPILYACHCCDRFFTSGK  366 (467)
T ss_pred             CcHHHHHHHHHHHHHHHhccCCCCCceeeecchhhhccch
Confidence            9999999999999999655 4  36699999999999885

>KOG1074|consensus

Probab=99.77  E-value=1.1e-19  Score=140.52  Aligned_cols=71  Identities=31%  Similarity=0.675  Sum_probs=64.5

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC----ccccCC---cchhhhc
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK----YTAEVP---GSILDCL  168 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~---~c~~~~~  168 (175)
                      .|..|+  .|.+.....+.|+.|+++|+|++||+|  .+||.+|.++.+|+.||.+|-..    .++.||   +|...|.
T Consensus       604 dPNqCi--iC~rVlSC~saLqmHyrtHtGERPFkC--KiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kft  679 (958)
T KOG1074|consen  604 DPNQCI--ICLRVLSCPSALQMHYRTHTGERPFKC--KICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFT  679 (958)
T ss_pred             Ccccee--eeeecccchhhhhhhhhcccCcCcccc--ccccchhccccchhhcccccccCccccccccCCchhhhccccc
Confidence            466797  899999999999999999999999999  99999999999999999998765    568999   9988887


Q ss_pred             cc
Q psy8966         169 SG  170 (175)
Q Consensus       169 ~~  170 (175)
                      ++
T Consensus       680 n~  681 (958)
T KOG1074|consen  680 NA  681 (958)
T ss_pred             cc
Confidence            65

>KOG3608|consensus

Probab=99.75  E-value=9.6e-19  Score=123.87  Aligned_cols=123  Identities=28%  Similarity=0.519  Sum_probs=81.3

Q ss_pred             CeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchh--cccchhhhhcc--C----------------------
Q psy8966          41 PYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIV--REDFVHLRIHS--G----------------------   94 (175)
Q Consensus        41 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~--~~~~~~~~~~~--~----------------------   94 (175)
                      .+.|.+..|-..+.++..|..|++.|.+++.-.......++.  ....+|.+..+  .                      
T Consensus       177 v~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~H  256 (467)
T KOG3608|consen  177 VTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSH  256 (467)
T ss_pred             eeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHH
Confidence            488988889999999999999999999987632222222211  22233333221  1                      


Q ss_pred             ----CcceeccCCCcccccCCHHHHHHHHh-hhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCc--chhhh
Q psy8966          95 ----IRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPG--SILDC  167 (175)
Q Consensus        95 ----~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--c~~~~  167 (175)
                          ..-|+||  .|+.+....++|..|++ .|..++||+|  +.|++.+.+.++|..|..+|. +..|.|+.  |.+++
T Consensus       257 v~rHvn~ykCp--lCdmtc~~~ssL~~H~r~rHs~dkpfKC--d~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~  331 (467)
T KOG3608|consen  257 VVRHVNCYKCP--LCDMTCSSASSLTTHIRYRHSKDKPFKC--DECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSV  331 (467)
T ss_pred             HHHhhhccccc--ccccCCCChHHHHHHHHhhhccCCCccc--cchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHH
Confidence                2345565  66666666677777754 4666778888  778888888888888877776 66677776  76655


Q ss_pred             c
Q psy8966         168 L  168 (175)
Q Consensus       168 ~  168 (175)
                      .
T Consensus       332 r  332 (467)
T KOG3608|consen  332 R  332 (467)
T ss_pred             H
Confidence            4

>KOG3576|consensus

Probab=99.67  E-value=2.5e-17  Score=108.56  Aligned_cols=97  Identities=28%  Similarity=0.673  Sum_probs=82.2

Q ss_pred             CCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHH
Q psy8966          39 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAH  118 (175)
Q Consensus        39 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H  118 (175)
                      ...|.|  ++|++.|.-..-|++|++.|..                          .+.+.|.  .||+.|.+--+|++|
T Consensus       115 ~d~ftC--rvCgK~F~lQRmlnrh~kch~~--------------------------vkr~lct--~cgkgfndtfdlkrh  164 (267)
T KOG3576|consen  115 QDSFTC--RVCGKKFGLQRMLNRHLKCHSD--------------------------VKRHLCT--FCGKGFNDTFDLKRH  164 (267)
T ss_pred             CCeeee--ehhhhhhhHHHHHHHHhhhccH--------------------------HHHHHHh--hccCcccchhhhhhh
Confidence            345899  5699999999999999887654                          5567887  799999999999999


Q ss_pred             HhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcC-----------CccccCCcchhhh
Q psy8966         119 IRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG-----------KYTAEVPGSILDC  167 (175)
Q Consensus       119 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~c~~~~  167 (175)
                      +++|+|.+||+|  +.|+++|.++..|..|.+.-+|           ++.|.|+.||++.
T Consensus       165 ~rthtgvrpykc--~~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~  222 (267)
T KOG3576|consen  165 TRTHTGVRPYKC--SLCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTS  222 (267)
T ss_pred             hccccCccccch--hhhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCC
Confidence            999999999999  9999999999999999974333           2669999999764

>KOG1074|consensus

Probab=99.63  E-value=9e-17  Score=124.69  Aligned_cols=61  Identities=39%  Similarity=0.761  Sum_probs=55.0

Q ss_pred             eccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966          99 KCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus        99 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      .|.  .|++.|.+.++|..|+++|+++|||.|  ..|++.|..+.+|..||..|...+|..=.+|
T Consensus       881 ~C~--vCgk~FsSSsALqiH~rTHtg~KPF~C--~fC~~aFttrgnLKvHMgtH~w~q~~srrG~  941 (958)
T KOG1074|consen  881 VCN--VCGKQFSSSAALEIHMRTHTGPKPFFC--HFCEEAFTTRGNLKVHMGTHMWVQPPSRRGP  941 (958)
T ss_pred             hhc--cchhcccchHHHHHhhhcCCCCCCccc--hhhhhhhhhhhhhhhhhccccccCCCccCCC
Confidence            475  899999999999999999999999999  9999999999999999999988877654443

>KOG3623|consensus

Probab=99.57  E-value=1.4e-15  Score=116.76  Aligned_cols=97  Identities=24%  Similarity=0.547  Sum_probs=82.0

Q ss_pred             eeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhh
Q psy8966          42 YRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT  121 (175)
Q Consensus        42 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  121 (175)
                      ..|++  |.+.+....+|+.|++..+..                        .+..|.|.  .|.++|...+.|.+|+.+
T Consensus       211 ltcpy--cdrgykrltslkeHikyrhek------------------------ne~nfsC~--lCsytFAyRtQLErhm~~  262 (1007)
T KOG3623|consen  211 LTCPY--CDRGYKRLTSLKEHIKYRHEK------------------------NEPNFSCM--LCSYTFAYRTQLERHMQL  262 (1007)
T ss_pred             hcchh--HHHHHHHHHHHHHHHHHHHhh------------------------CCCCCcch--hhhhhhhhHHHHHHHHHh
Confidence            57876  999999999999998875431                        14457786  899999999999999998


Q ss_pred             hcC-------------CCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchhhhc
Q psy8966         122 HTG-------------EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCL  168 (175)
Q Consensus       122 h~~-------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~~~~  168 (175)
                      |.-             .+.|+|  .+|||+|+.+..|..|+|+|.||+||+|+.|++.|.
T Consensus       263 hkpg~dqa~sltqsa~lRKFKC--tECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFS  320 (1007)
T KOG3623|consen  263 HKPGGDQAISLTQSALLRKFKC--TECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFS  320 (1007)
T ss_pred             hcCCCcccccccchhhhccccc--cccchhhhhHHHHHhhheeecCCCCcCCcccccccc
Confidence            842             245999  779999999999999999999999999999998874

>KOG3576|consensus

Probab=99.53  E-value=2.5e-15  Score=99.19  Aligned_cols=115  Identities=35%  Similarity=0.671  Sum_probs=100.2

Q ss_pred             CCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchh
Q psy8966           9 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVH   88 (175)
Q Consensus         9 ~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~   88 (175)
                      ...|.|.  .||+.|.....|.+|++.|...+.+.|..  ||+.|...-.|.+|+++|+|                    
T Consensus       115 ~d~ftCr--vCgK~F~lQRmlnrh~kch~~vkr~lct~--cgkgfndtfdlkrh~rthtg--------------------  170 (267)
T KOG3576|consen  115 QDSFTCR--VCGKKFGLQRMLNRHLKCHSDVKRHLCTF--CGKGFNDTFDLKRHTRTHTG--------------------  170 (267)
T ss_pred             CCeeeee--hhhhhhhHHHHHHHHhhhccHHHHHHHhh--ccCcccchhhhhhhhccccC--------------------
Confidence            3458887  99999999999999999999999999966  99999999999999888766                    


Q ss_pred             hhhccCCcceeccCCCcccccCCHHHHHHHHh-hhc----------CCCcccCCcccchHHHhchhhHHHHHHHhcCCcc
Q psy8966          89 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THT----------GEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT  157 (175)
Q Consensus        89 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~----------~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  157 (175)
                            .+||+|.  .|++.|...-+|..|.+ +|.          .++.|.|  +.||+.-.....+..|++.|++--|
T Consensus       171 ------vrpykc~--~c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vc--edcg~t~~~~e~~~~h~~~~hp~Sp  240 (267)
T KOG3576|consen  171 ------VRPYKCS--LCEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVC--EDCGYTSERPEVYYLHLKLHHPFSP  240 (267)
T ss_pred             ------ccccchh--hhhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeee--cccCCCCCChhHHHHHHHhcCCCCH
Confidence                  7899996  89999999999999964 442          3467999  9999999999999999999877544

>KOG3623|consensus

Probab=99.51  E-value=5.1e-15  Score=113.74  Aligned_cols=119  Identities=33%  Similarity=0.700  Sum_probs=97.4

Q ss_pred             ccCCCccchhhccChHHHHHHHhhhcC--CCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhh
Q psy8966          12 YKCPVEYCEKAFSTQYSRKAHIRTHTG--EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHL   89 (175)
Q Consensus        12 ~~C~~~~C~~~f~~~~~L~~h~~~~~~--~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~   89 (175)
                      ..|+  +|+..+.....|++|++..+.  +..|.|..  |...|.....|.+||..|..-....             .+.
T Consensus       211 ltcp--ycdrgykrltslkeHikyrhekne~nfsC~l--CsytFAyRtQLErhm~~hkpg~dqa-------------~sl  273 (1007)
T KOG3623|consen  211 LTCP--YCDRGYKRLTSLKEHIKYRHEKNEPNFSCML--CSYTFAYRTQLERHMQLHKPGGDQA-------------ISL  273 (1007)
T ss_pred             hcch--hHHHHHHHHHHHHHHHHHHHhhCCCCCcchh--hhhhhhhHHHHHHHHHhhcCCCccc-------------ccc
Confidence            5687  999999999999999986433  34599965  9999999999999999986522110             111


Q ss_pred             hhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHH
Q psy8966          90 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT  151 (175)
Q Consensus        90 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  151 (175)
                      -.....+.|+|+  +|++.|+.+-.|+.|+++|.|+|||.|  +.|+|.|..+..+..||.+
T Consensus       274 tqsa~lRKFKCt--ECgKAFKfKHHLKEHlRIHSGEKPfeC--pnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  274 TQSALLRKFKCT--ECGKAFKFKHHLKEHLRIHSGEKPFEC--PNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             cchhhhcccccc--ccchhhhhHHHHHhhheeecCCCCcCC--cccccccccCCcccccccc
Confidence            122335689998  999999999999999999999999999  8899999999999999864

>PHA00733 hypothetical protein

Probab=99.04  E-value=3.2e-10  Score=71.86  Aligned_cols=101  Identities=25%  Similarity=0.331  Sum_probs=74.1

Q ss_pred             ChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCC
Q psy8966          25 TQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEY  104 (175)
Q Consensus        25 ~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~  104 (175)
                      +.+.|.++-..-...+.+.|.  +|...|.....|..+....                    .++ ...+.+||.|+  .
T Consensus        24 ~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~l~~~~~l~--------------------~~~-~~~~~kPy~C~--~   78 (128)
T PHA00733         24 TLEELKRYHSLTPEQKRLIRA--VVKTLIYNPQLLDESSYLY--------------------KLL-TSKAVSPYVCP--L   78 (128)
T ss_pred             CHHHhhhhhcCChhhhhHHHH--HHhhhccChhhhcchHHHH--------------------hhc-ccCCCCCccCC--C
Confidence            444554443333345668895  4999998877777662211                    112 22347899997  8


Q ss_pred             cccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         105 CEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       105 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      |++.|.+..+|..|+..+  +.+|.|  ++|++.|.....|..|+...++
T Consensus        79 Cgk~Fss~s~L~~H~r~h--~~~~~C--~~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         79 CLMPFSSSVSLKQHIRYT--EHSKVC--PVCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             CCCcCCCHHHHHHHHhcC--CcCccC--CCCCCccCCHHHHHHHHHHhcC
Confidence            999999999999999876  467999  8899999999999999987665

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.97  E-value=2.3e-10  Score=51.83  Aligned_cols=25  Identities=32%  Similarity=0.444  Sum_probs=17.7

Q ss_pred             hHHHHHHHhcCCccccCCcchhhhc
Q psy8966         144 DLQKHVRTHTGKYTAEVPGSILDCL  168 (175)
Q Consensus       144 ~l~~H~~~h~~~~~~~C~~c~~~~~  168 (175)
                      +|.+|+++|+|++||.|+.|+++|.
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEES
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeC
Confidence            3667777777777777777777664

...

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.97  E-value=5.6e-10  Score=85.99  Aligned_cols=136  Identities=17%  Similarity=0.317  Sum_probs=86.3

Q ss_pred             cCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhc
Q psy8966          13 KCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIH   92 (175)
Q Consensus        13 ~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~   92 (175)
                      .|+  .|...... .+|..|...- ....-.|+..+|+..|.. ..+..|.       .|..+... +....+..|++.+
T Consensus       409 ~C~--NC~~~i~l-~~l~lHe~~C-~r~~V~Cp~~~Cg~v~~r-~el~~H~-------~C~~Cgk~-f~~s~LekH~~~~  475 (567)
T PLN03086        409 ECR--NCKHYIPS-RSIALHEAYC-SRHNVVCPHDGCGIVLRV-EEAKNHV-------HCEKCGQA-FQQGEMEKHMKVF  475 (567)
T ss_pred             ECC--CCCCccch-hHHHHHHhhC-CCcceeCCcccccceeec-cccccCc-------cCCCCCCc-cchHHHHHHHHhc
Confidence            465  67775433 5566776432 112245643246666632 2233332       22222211 1223334566665


Q ss_pred             cCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhc----------hhhHHHHHHHhcCCccccCCc
Q psy8966          93 SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKT----------SGDLQKHVRTHTGKYTAEVPG  162 (175)
Q Consensus        93 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~----------~~~l~~H~~~h~~~~~~~C~~  162 (175)
                      .  .++.|+   |++.+ ....|..|+.+|...+++.|  ..|++.+..          .+.|..|..+. |.+++.|..
T Consensus       476 H--kpv~Cp---Cg~~~-~R~~L~~H~~thCp~Kpi~C--~fC~~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~  546 (567)
T PLN03086        476 H--EPLQCP---CGVVL-EKEQMVQHQASTCPLRLITC--RFCGDMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDS  546 (567)
T ss_pred             C--CCccCC---CCCCc-chhHHHhhhhccCCCCceeC--CCCCCccccCccccchhhhhhhHHHHHHhc-CCcceEccc
Confidence            3  688995   98755 66899999999999999999  889998852          35799999885 889999999


Q ss_pred             chhhhccc
Q psy8966         163 SILDCLSG  170 (175)
Q Consensus       163 c~~~~~~~  170 (175)
                      ||..+.-.
T Consensus       547 Cgk~Vrlr  554 (567)
T PLN03086        547 CGRSVMLK  554 (567)
T ss_pred             cCCeeeeh
Confidence            99876544

>PHA02768 hypothetical protein; Provisional

Probab=98.89  E-value=6.7e-10  Score=58.65  Aligned_cols=42  Identities=24%  Similarity=0.604  Sum_probs=29.2

Q ss_pred             eeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhH
Q psy8966          98 YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDL  145 (175)
Q Consensus        98 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l  145 (175)
                      |.|+  .||+.|...++|..|+++|+  ++|+|  .+|++.|.+.+.|
T Consensus         6 y~C~--~CGK~Fs~~~~L~~H~r~H~--k~~kc--~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECP--ICGEIYIKRKSMITHLRKHN--TNLKL--SNCKRISLRTGEY   47 (55)
T ss_pred             cCcc--hhCCeeccHHHHHHHHHhcC--CcccC--Ccccceeccccee
Confidence            5665  67777777777777777775  57777  6677777766554

>PHA02768 hypothetical protein; Provisional

Probab=98.89  E-value=7.7e-10  Score=58.40  Aligned_cols=38  Identities=18%  Similarity=0.436  Sum_probs=35.0

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchhhhc
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCL  168 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~~~~  168 (175)
                      .|.|  ++||+.|....+|..|+++|+  .++.|..|++.|.
T Consensus         5 ~y~C--~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~   42 (55)
T PHA02768          5 GYEC--PICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISL   42 (55)
T ss_pred             ccCc--chhCCeeccHHHHHHHHHhcC--CcccCCcccceec
Confidence            4899  889999999999999999999  6999999998765

>PLN03086 PRLI-interacting factor K; Provisional

Probab=98.79  E-value=2.5e-08  Score=77.07  Aligned_cols=101  Identities=17%  Similarity=0.358  Sum_probs=68.3

Q ss_pred             eeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccC----------C
Q psy8966          42 YRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFS----------T  111 (175)
Q Consensus        42 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~----------~  111 (175)
                      +.|..  |+..|. ...|..|+..++....|. +. .......+..|+..+-..+++.|+  .|++.+.          .
T Consensus       454 ~~C~~--Cgk~f~-~s~LekH~~~~Hkpv~Cp-Cg-~~~~R~~L~~H~~thCp~Kpi~C~--fC~~~v~~g~~~~d~~d~  526 (567)
T PLN03086        454 VHCEK--CGQAFQ-QGEMEKHMKVFHEPLQCP-CG-VVLEKEQMVQHQASTCPLRLITCR--FCGDMVQAGGSAMDVRDR  526 (567)
T ss_pred             ccCCC--CCCccc-hHHHHHHHHhcCCCccCC-CC-CCcchhHHHhhhhccCCCCceeCC--CCCCccccCccccchhhh
Confidence            46644  777664 456677776655333343 22 222222334466667778999997  8999985          2


Q ss_pred             HHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhc
Q psy8966         112 QYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus       112 ~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      .++|..|..+. +.+++.|  ..||+.+..+ +|..|+..-+
T Consensus       527 ~s~Lt~HE~~C-G~rt~~C--~~Cgk~Vrlr-dm~~H~~~~h  564 (567)
T PLN03086        527 LRGMSEHESIC-GSRTAPC--DSCGRSVMLK-EMDIHQIAVH  564 (567)
T ss_pred             hhhHHHHHHhc-CCcceEc--cccCCeeeeh-hHHHHHHHhh
Confidence            45899998886 8999999  8999988865 6778886543

>PHA00616 hypothetical protein

Probab=98.75  E-value=6.4e-09  Score=52.30  Aligned_cols=35  Identities=14%  Similarity=0.298  Sum_probs=29.9

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      ||+|  +.||+.|..+++|.+|++.|+|+.++.|+.-
T Consensus         1 pYqC--~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~~   35 (44)
T PHA00616          1 MYQC--LRCGGIFRKKKEVIEHLLSVHKQNKLTLEYF   35 (44)
T ss_pred             CCcc--chhhHHHhhHHHHHHHHHHhcCCCccceeEE
Confidence            6888  7799999999999999999999988888753

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.74  E-value=2.9e-09  Score=48.16  Aligned_cols=26  Identities=58%  Similarity=1.248  Sum_probs=22.7

Q ss_pred             HHHHHHhhhcCCCcccCCcccchHHHhc
Q psy8966         114 SRKAHIRTHTGEKPYRCAHEFCSKSFKT  141 (175)
Q Consensus       114 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~  141 (175)
                      +|..|+++|++++||.|  ++|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C--~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKC--PYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEE--SSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCC--CCCcCeeCc
Confidence            57899999999999999  889998863

...

>PHA00733 hypothetical protein

Probab=98.71  E-value=2.3e-08  Score=63.38  Aligned_cols=84  Identities=20%  Similarity=0.346  Sum_probs=64.8

Q ss_pred             CCCCCccCCCccchhhccChHHHHHH--Hh---hhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccch
Q psy8966           7 SGIRPYKCPVEYCEKAFSTQYSRKAH--IR---THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLI   81 (175)
Q Consensus         7 ~~~~~~~C~~~~C~~~f~~~~~L~~h--~~---~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~   81 (175)
                      ..++++.|.  .|...|.....|..+  +.   .+.+..+|.|..  |++.|.+...|..|++.+               
T Consensus        36 ~~~~~~~~~--~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~--Cgk~Fss~s~L~~H~r~h---------------   96 (128)
T PHA00733         36 PEQKRLIRA--VVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPL--CLMPFSSSVSLKQHIRYT---------------   96 (128)
T ss_pred             hhhhhHHHH--HHhhhccChhhhcchHHHHhhcccCCCCCccCCC--CCCcCCCHHHHHHHHhcC---------------
Confidence            346778997  899888877776665  22   234467899965  999999999999997754               


Q ss_pred             hcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          82 VREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                                   ..++.|.  .|++.|.....|..|+...++
T Consensus        97 -------------~~~~~C~--~CgK~F~~~~sL~~H~~~~h~  124 (128)
T PHA00733         97 -------------EHSKVCP--VCGKEFRNTDSTLDHVCKKHN  124 (128)
T ss_pred             -------------CcCccCC--CCCCccCCHHHHHHHHHHhcC
Confidence                         1257886  899999999999999876543

>KOG3993|consensus

Probab=98.61  E-value=2.5e-08  Score=73.20  Aligned_cols=106  Identities=23%  Similarity=0.405  Sum_probs=75.6

Q ss_pred             ccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCC--C-ccchhcccchh
Q psy8966          12 YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGI--D-SRLIVREDFVH   88 (175)
Q Consensus        12 ~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~--~-~~~~~~~~~~~   88 (175)
                      |.|.  .|...|.+...|.+|....+-...|.|++  |++.|+-.++|..|++.|..........  . +..........
T Consensus       268 yiCq--LCK~kYeD~F~LAQHrC~RIV~vEYrCPE--C~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~  343 (500)
T KOG3993|consen  268 YICQ--LCKEKYEDAFALAQHRCPRIVHVEYRCPE--CDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQ  343 (500)
T ss_pred             HHHH--HHHHhhhhHHHHhhccCCeeEEeeecCCc--ccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhh
Confidence            8887  99999999999999998777777899987  9999999999999999998754322100  0 00000000000


Q ss_pred             ----hhhccCCcceeccCCCcccccCCHHHHHHHHhhhc
Q psy8966          89 ----LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHT  123 (175)
Q Consensus        89 ----~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  123 (175)
                          .-....+..|.|.  .|++.|..+.-|..|+.+|.
T Consensus       344 ea~rsg~dss~gi~~C~--~C~KkFrRqAYLrKHqlthq  380 (500)
T KOG3993|consen  344 EAERSGDDSSSGIFSCH--TCGKKFRRQAYLRKHQLTHQ  380 (500)
T ss_pred             hccccCCcccCceeecH--HhhhhhHHHHHHHHhHHhhh
Confidence                0011335688896  89999999999999976653

>PHA00616 hypothetical protein

Probab=98.41  E-value=1.5e-07  Score=47.39  Aligned_cols=32  Identities=16%  Similarity=0.318  Sum_probs=30.2

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                      ||.|+  .||+.|..+++|..|++.|++++++.|
T Consensus         1 pYqC~--~CG~~F~~~s~l~~H~r~~hg~~~~~~   32 (44)
T PHA00616          1 MYQCL--RCGGIFRKKKEVIEHLLSVHKQNKLTL   32 (44)
T ss_pred             CCccc--hhhHHHhhHHHHHHHHHHhcCCCccce
Confidence            68897  999999999999999999999999888

>PHA00732 hypothetical protein

Probab=98.14  E-value=1e-06  Score=50.91  Aligned_cols=47  Identities=34%  Similarity=0.719  Sum_probs=37.3

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhh-hcCCCcccCCcccchHHHhchhhHHHHHHHhc
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRT-HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      ||.|.  .|++.|.+.++|..|++. |.   ++.|  ++|++.|.   .+..|..++.
T Consensus         1 py~C~--~Cgk~F~s~s~Lk~H~r~~H~---~~~C--~~CgKsF~---~l~~H~~~~~   48 (79)
T PHA00732          1 MFKCP--ICGFTTVTLFALKQHARRNHT---LTKC--PVCNKSYR---RLNQHFYSQY   48 (79)
T ss_pred             CccCC--CCCCccCCHHHHHHHhhcccC---CCcc--CCCCCEeC---ChhhhhcccC
Confidence            57786  899999999999999874 54   4589  88999998   5778886543

>PHA00732 hypothetical protein

Probab=98.10  E-value=1.5e-06  Score=50.18  Aligned_cols=38  Identities=24%  Similarity=0.344  Sum_probs=33.0

Q ss_pred             cccCCcccchHHHhchhhHHHHHHH-hcCCccccCCcchhhhcc
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRT-HTGKYTAEVPGSILDCLS  169 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~c~~~~~~  169 (175)
                      ||.|  +.|++.|.....|..|++. |++   +.|+.||+.|.+
T Consensus         1 py~C--~~Cgk~F~s~s~Lk~H~r~~H~~---~~C~~CgKsF~~   39 (79)
T PHA00732          1 MFKC--PICGFTTVTLFALKQHARRNHTL---TKCPVCNKSYRR   39 (79)
T ss_pred             CccC--CCCCCccCCHHHHHHHhhcccCC---CccCCCCCEeCC
Confidence            6889  8899999999999999985 654   589999998874

>KOG3993|consensus

Probab=98.08  E-value=1.1e-06  Score=64.80  Aligned_cols=81  Identities=31%  Similarity=0.638  Sum_probs=65.2

Q ss_pred             eeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhh
Q psy8966          42 YRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT  121 (175)
Q Consensus        42 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  121 (175)
                      |.|  ++|...|.+.-.|.+|.-...                          .-..|+|+  +|++.|+...+|..|.++
T Consensus       268 yiC--qLCK~kYeD~F~LAQHrC~RI--------------------------V~vEYrCP--EC~KVFsCPANLASHRRW  317 (500)
T KOG3993|consen  268 YIC--QLCKEKYEDAFALAQHRCPRI--------------------------VHVEYRCP--ECDKVFSCPANLASHRRW  317 (500)
T ss_pred             HHH--HHHHHhhhhHHHHhhccCCee--------------------------EEeeecCC--cccccccCchhhhhhhcc
Confidence            788  569999999988888843211                          12358997  999999999999999999


Q ss_pred             hc--------CCC-------------------------cccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         122 HT--------GEK-------------------------PYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       122 h~--------~~~-------------------------~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      |.        +.+                         .|.|  .+|+|.|+....|+.|+.+|+.
T Consensus       318 HKPR~eaa~a~~~P~k~~~~~rae~~ea~rsg~dss~gi~~C--~~C~KkFrRqAYLrKHqlthq~  381 (500)
T KOG3993|consen  318 HKPRPEAAKAGSPPPKQAVETRAEVQEAERSGDDSSSGIFSC--HTCGKKFRRQAYLRKHQLTHQR  381 (500)
T ss_pred             cCCchhhhhcCCCChhhhhhhhhhhhhccccCCcccCceeec--HHhhhhhHHHHHHHHhHHhhhc
Confidence            83        111                         3999  8999999999999999888764

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=98.02  E-value=1.6e-06  Score=61.74  Aligned_cols=54  Identities=43%  Similarity=0.845  Sum_probs=43.2

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhc-------------------CCCcccCCcccchHHHhchhhHHHHHH
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHT-------------------GEKPYRCAHEFCSKSFKTSGDLQKHVR  150 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~-------------------~~~~~~C~~~~C~~~f~~~~~l~~H~~  150 (175)
                      ++||+|++..|++.+..+.+|+-|+.-.+                   .+|||.|  ++|+|.|+.--.|.-|..
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrC--evC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRC--EVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceec--cccchhhccCccceeccc
Confidence            48999999999999999999999975321                   2478888  888888888877777754

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.99  E-value=2.1e-05  Score=42.18  Aligned_cols=51  Identities=27%  Similarity=0.597  Sum_probs=39.5

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhh-hcC-CCcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRT-HTG-EKPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      .|.||  .|++ ..+..+|..|... |.. .+.+.|  ++|...+.  .+|.+|+.++++
T Consensus         2 ~f~CP--~C~~-~~~~~~L~~H~~~~H~~~~~~v~C--PiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCP--YCGK-GFSESSLVEHCEDEHRSESKNVVC--PICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCC--CCCC-ccCHHHHHHHHHhHCcCCCCCccC--CCchhhhh--hHHHHHHHHhcC
Confidence            47897  7999 5667899999755 544 357999  99998655  489999987653

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.96  E-value=2.4e-06  Score=37.31  Aligned_cols=22  Identities=41%  Similarity=1.081  Sum_probs=12.9

Q ss_pred             ccCCcccchHHHhchhhHHHHHHH
Q psy8966         128 YRCAHEFCSKSFKTSGDLQKHVRT  151 (175)
Q Consensus       128 ~~C~~~~C~~~f~~~~~l~~H~~~  151 (175)
                      |+|  ++|++.|..+..|..|++.
T Consensus         1 y~C--~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKC--PICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEE--TTTTEEESSHHHHHHHHHH
T ss_pred             CCC--CCCCCccCCHHHHHHHHhH
Confidence            455  5566666666666666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.64  E-value=5.7e-05  Score=32.79  Aligned_cols=22  Identities=41%  Similarity=1.044  Sum_probs=13.0

Q ss_pred             eeccccccCcccCChHHHHHHHHH
Q psy8966          42 YRCAHEFCSKSFKTSGDLQKHVRT   65 (175)
Q Consensus        42 ~~C~~~~C~~~f~~~~~l~~H~~~   65 (175)
                      |.|+.  |++.|.+...|..|++.
T Consensus         1 y~C~~--C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPI--CGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETT--TTEEESSHHHHHHHHHH
T ss_pred             CCCCC--CCCccCCHHHHHHHHhH
Confidence            45533  66666666666666654

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.61  E-value=2.6e-05  Score=34.11  Aligned_cols=23  Identities=43%  Similarity=1.131  Sum_probs=12.1

Q ss_pred             ccCCcccchHHHhchhhHHHHHHHh
Q psy8966         128 YRCAHEFCSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus       128 ~~C~~~~C~~~f~~~~~l~~H~~~h  152 (175)
                      |.|  ++|++.|.+...|..|++.|
T Consensus         1 ~~C--~~C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQC--PICGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE---SSTS-EESSHHHHHHHHHHH
T ss_pred             CCC--cCCCCcCCcHHHHHHHHHhh
Confidence            455  55666666666666666554

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.56  E-value=1.8e-05  Score=35.92  Aligned_cols=23  Identities=35%  Similarity=0.901  Sum_probs=12.7

Q ss_pred             ccCCcccchHHHhchhhHHHHHHHh
Q psy8966         128 YRCAHEFCSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus       128 ~~C~~~~C~~~f~~~~~l~~H~~~h  152 (175)
                      |.|  .+|++.|.+..+|..|++.|
T Consensus         2 ~~C--~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FEC--DECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEE--TTTTEEESSHHHHHHHHCTT
T ss_pred             CCC--CccCCccCChhHHHHHhHHh
Confidence            455  55555555555555555544

>smart00355 ZnF_C2H2 zinc finger

Probab=97.25  E-value=0.00027  Score=31.26  Aligned_cols=24  Identities=50%  Similarity=0.964  Sum_probs=16.6

Q ss_pred             ccCCcccchHHHhchhhHHHHHHHhc
Q psy8966         128 YRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus       128 ~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      |.|  +.|++.|.....|..|++.|.
T Consensus         1 ~~C--~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRC--PECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCC--CCCcchhCCHHHHHHHHHHhc
Confidence            456  667777777777777777554

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=97.24  E-value=0.00084  Score=35.87  Aligned_cols=50  Identities=30%  Similarity=0.622  Sum_probs=38.3

Q ss_pred             CccCCCccchhhccChHHHHHHHhh-hcCC-CCeeccccccCcccCChHHHHHHHHHhc
Q psy8966          11 PYKCPVEYCEKAFSTQYSRKAHIRT-HTGE-KPYRCAHEFCSKSFKTSGDLQKHVRTHT   67 (175)
Q Consensus        11 ~~~C~~~~C~~~f~~~~~L~~h~~~-~~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~   67 (175)
                      .|.|+  .|++ ..+...|..|... |..+ +.+.|+.  |...+.  .+|..|+..++
T Consensus         2 ~f~CP--~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPi--C~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    2 SFTCP--YCGK-GFSESSLVEHCEDEHRSESKNVVCPI--CSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             CcCCC--CCCC-ccCHHHHHHHHHhHCcCCCCCccCCC--chhhhh--hHHHHHHHHhc
Confidence            48898  9999 6778999999885 5443 4589966  998654  48999988765

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.20  E-value=0.00046  Score=29.91  Aligned_cols=23  Identities=43%  Similarity=1.096  Sum_probs=11.6

Q ss_pred             eeccccccCcccCChHHHHHHHHHh
Q psy8966          42 YRCAHEFCSKSFKTSGDLQKHVRTH   66 (175)
Q Consensus        42 ~~C~~~~C~~~f~~~~~l~~H~~~h   66 (175)
                      |.|+.  |+..|.+...|..|+..+
T Consensus         1 ~~C~~--C~~~~~~~~~l~~H~~~~   23 (24)
T PF13894_consen    1 FQCPI--CGKSFRSKSELRQHMRTH   23 (24)
T ss_dssp             EE-SS--TS-EESSHHHHHHHHHHH
T ss_pred             CCCcC--CCCcCCcHHHHHHHHHhh
Confidence            34533  666666666666665544

...

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.17  E-value=0.00035  Score=31.53  Aligned_cols=24  Identities=33%  Similarity=0.875  Sum_probs=14.7

Q ss_pred             eeccccccCcccCChHHHHHHHHHhc
Q psy8966          42 YRCAHEFCSKSFKTSGDLQKHVRTHT   67 (175)
Q Consensus        42 ~~C~~~~C~~~f~~~~~l~~H~~~h~   67 (175)
                      |.|..  |+..|.+..+|..|++.|.
T Consensus         2 ~~C~~--C~~~F~~~~~l~~H~~~h~   25 (27)
T PF13912_consen    2 FECDE--CGKTFSSLSALREHKRSHC   25 (27)
T ss_dssp             EEETT--TTEEESSHHHHHHHHCTTT
T ss_pred             CCCCc--cCCccCChhHHHHHhHHhc
Confidence            56633  6666666666666665553

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.16  E-value=0.00022  Score=51.21  Aligned_cols=72  Identities=25%  Similarity=0.466  Sum_probs=50.0

Q ss_pred             CCCeeccccccCcccCChHHHHHHHHH-hcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHH
Q psy8966          39 EKPYRCAHEFCSKSFKTSGDLQKHVRT-HTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKA  117 (175)
Q Consensus        39 ~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~  117 (175)
                      .++|+|+.++|.+.+++.-.|.=|+.- |..........        +..+.-.-...+||+|+  .|++.++...+|+-
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~--------p~~~~~F~~~~KPYrCe--vC~KRYKNlNGLKY  416 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPS--------PEKMNIFSAKDKPYRCE--VCDKRYKNLNGLKY  416 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCC--------ccccccccccCCceecc--ccchhhccCcccee
Confidence            488999988999999999999988764 33322211110        01112223446899997  79999999999998


Q ss_pred             HHh
Q psy8966         118 HIR  120 (175)
Q Consensus       118 H~~  120 (175)
                      |+.
T Consensus       417 Hr~  419 (423)
T COG5189         417 HRK  419 (423)
T ss_pred             ccc
Confidence            864

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.10  E-value=0.00031  Score=36.26  Aligned_cols=31  Identities=26%  Similarity=0.560  Sum_probs=14.6

Q ss_pred             CCcccCCcccchHHHhchhhHHHHHHHhcCCcc
Q psy8966         125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT  157 (175)
Q Consensus       125 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  157 (175)
                      ++|-.|  ++|+..+.+..+|.+|+.+.++.+|
T Consensus        22 ~~PatC--P~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   22 EQPATC--PICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             S--EE---TTT--EESSHHHHHHHHHHHTTTS-
T ss_pred             CCCCCC--CcchhhccchhhHHHHHHHHhcccC
Confidence            455566  5566666666666666665555443

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.01  E-value=0.0008  Score=40.61  Aligned_cols=24  Identities=33%  Similarity=1.028  Sum_probs=16.5

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhhh
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRTH  122 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~h  122 (175)
                      .+.|.  .|++.|.+..+|..|++.+
T Consensus        50 ~~~C~--~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen   50 SFRCP--YCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             SEEBS--SSS-EESSHHHHHHHHHHT
T ss_pred             CCCCC--ccCCCCcCHHHHHHHHcCc
Confidence            56776  6777777777777777654

>PRK04860 hypothetical protein; Provisional

Probab=96.89  E-value=0.0005  Score=45.33  Aligned_cols=35  Identities=23%  Similarity=0.446  Sum_probs=24.0

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchhhh
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDC  167 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~~~  167 (175)
                      +|.|  . |+.   ....+.+|.++|+++.+|.|..|+..+
T Consensus       119 ~Y~C--~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l  153 (160)
T PRK04860        119 PYRC--K-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETL  153 (160)
T ss_pred             EEEc--C-CCC---eeCHHHHHHHHhcCCccEECCCCCcee
Confidence            4777  5 765   556667777777777777777776554

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=96.52  E-value=0.0011  Score=40.01  Aligned_cols=47  Identities=30%  Similarity=0.852  Sum_probs=21.3

Q ss_pred             CcccccCCHHHHHHHHhhhcC-----------------------CCcccCCcccchHHHhchhhHHHHHHHh
Q psy8966         104 YCEKAFSTQYSRKAHIRTHTG-----------------------EKPYRCAHEFCSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus       104 ~C~~~f~~~~~l~~H~~~h~~-----------------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h  152 (175)
                      .|+..|.+...|..|+...++                       ...+.|  ..|++.|.+...|..||+.+
T Consensus         4 ~C~~~f~~~~~l~~H~~~~H~~~~~~~~~l~~~~~~~~~~~~~~~~~~~C--~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    4 FCDESFSSVDDLLQHMKKKHGFDIPDQKYLVDPNRLLNYLRKKVKESFRC--PYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             ---------------------------------------------SSEEB--SSSS-EESSHHHHHHHHHHT
T ss_pred             ccccccccccccccccccccccccccccccccccccccccccccCCCCCC--CccCCCCcCHHHHHHHHcCc
Confidence            566666666666666532211                       124899  89999999999999999974

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.47  E-value=0.0011  Score=28.95  Aligned_cols=19  Identities=32%  Similarity=0.672  Sum_probs=8.6

Q ss_pred             ccchHHHhchhhHHHHHHHh
Q psy8966         133 EFCSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus       133 ~~C~~~f~~~~~l~~H~~~h  152 (175)
                      +.|++... ...|..|++.+
T Consensus         4 ~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    4 PHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCcCC-HHHHHHHHHhh
Confidence            44554444 44555555443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.46  E-value=0.0007  Score=29.87  Aligned_cols=22  Identities=36%  Similarity=1.014  Sum_probs=13.9

Q ss_pred             ccCCcccchHHHhchhhHHHHHHH
Q psy8966         128 YRCAHEFCSKSFKTSGDLQKHVRT  151 (175)
Q Consensus       128 ~~C~~~~C~~~f~~~~~l~~H~~~  151 (175)
                      |.|  ++|++.|.+...|..|++.
T Consensus         1 ~~C--~~C~~~f~s~~~~~~H~~s   22 (25)
T PF12874_consen    1 FYC--DICNKSFSSENSLRQHLRS   22 (25)
T ss_dssp             EEE--TTTTEEESSHHHHHHHHTT
T ss_pred             CCC--CCCCCCcCCHHHHHHHHCc
Confidence            456  6666666666666666654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.37  E-value=0.0059  Score=31.65  Aligned_cols=33  Identities=21%  Similarity=0.500  Sum_probs=23.7

Q ss_pred             cCCcceeccCCCcccccCCHHHHHHHHhhhcCCCc
Q psy8966          93 SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP  127 (175)
Q Consensus        93 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  127 (175)
                      ..+.|-.||  .|+..+.+..+|.+|+.+.++.+|
T Consensus        20 ~S~~PatCP--~C~a~~~~srnLrRHle~~H~~k~   52 (54)
T PF09237_consen   20 QSEQPATCP--ICGAVIRQSRNLRRHLEIRHFKKP   52 (54)
T ss_dssp             TTS--EE-T--TT--EESSHHHHHHHHHHHTTTS-
T ss_pred             ccCCCCCCC--cchhhccchhhHHHHHHHHhcccC
Confidence            346788998  899999999999999988888776

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.20  E-value=0.0044  Score=27.20  Aligned_cols=23  Identities=35%  Similarity=0.979  Sum_probs=16.3

Q ss_pred             eeccccccCcccCChHHHHHHHHHh
Q psy8966          42 YRCAHEFCSKSFKTSGDLQKHVRTH   66 (175)
Q Consensus        42 ~~C~~~~C~~~f~~~~~l~~H~~~h   66 (175)
                      |.|  +.|+..|.+...|..|++.+
T Consensus         1 ~~C--~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYC--DICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEE--TTTTEEESSHHHHHHHHTTH
T ss_pred             CCC--CCCCCCcCCHHHHHHHHCcC
Confidence            467  44888888888888877653

>smart00355 ZnF_C2H2 zinc finger

Probab=96.14  E-value=0.0071  Score=26.37  Aligned_cols=17  Identities=47%  Similarity=0.931  Sum_probs=8.9

Q ss_pred             cCcccCChHHHHHHHHH
Q psy8966          49 CSKSFKTSGDLQKHVRT   65 (175)
Q Consensus        49 C~~~f~~~~~l~~H~~~   65 (175)
                      |++.|.+...|..|++.
T Consensus         6 C~~~f~~~~~l~~H~~~   22 (26)
T smart00355        6 CGKVFKSKSALKEHMRT   22 (26)
T ss_pred             CcchhCCHHHHHHHHHH
Confidence            55555555555555543

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.04  E-value=0.009  Score=25.94  Aligned_cols=23  Identities=39%  Similarity=0.969  Sum_probs=13.8

Q ss_pred             eeccccccCcccCChHHHHHHHHHhc
Q psy8966          42 YRCAHEFCSKSFKTSGDLQKHVRTHT   67 (175)
Q Consensus        42 ~~C~~~~C~~~f~~~~~l~~H~~~h~   67 (175)
                      |.|+.  |+.... ...|..|++.++
T Consensus         1 y~C~~--C~y~t~-~~~l~~H~~~~H   23 (24)
T PF13909_consen    1 YKCPH--CSYSTS-KSNLKRHLKRHH   23 (24)
T ss_dssp             EE-SS--SS-EES-HHHHHHHHHHHH
T ss_pred             CCCCC--CCCcCC-HHHHHHHHHhhC
Confidence            46744  777766 667777776654

>PRK04860 hypothetical protein; Provisional

Probab=95.91  E-value=0.0037  Score=41.30  Aligned_cols=40  Identities=35%  Similarity=0.808  Sum_probs=33.1

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchh
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSG  143 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~  143 (175)
                      -+|.|   .|+.   ....+.+|.++|+++++|.|  ..|+..|....
T Consensus       118 ~~Y~C---~C~~---~~~~~rrH~ri~~g~~~YrC--~~C~~~l~~~~  157 (160)
T PRK04860        118 FPYRC---KCQE---HQLTVRRHNRVVRGEAVYRC--RRCGETLVFKG  157 (160)
T ss_pred             EEEEc---CCCC---eeCHHHHHHHHhcCCccEEC--CCCCceeEEec
Confidence            47888   4877   55678899999999999999  88999887543

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=95.22  E-value=0.0041  Score=47.42  Aligned_cols=151  Identities=23%  Similarity=0.344  Sum_probs=104.5

Q ss_pred             CccCCCccchhhccChHHHHHHHh--hhcCC--CCeeccccccCcccCChHHHHHHHHHhcCCCCCCC----CCCccchh
Q psy8966          11 PYKCPVEYCEKAFSTQYSRKAHIR--THTGE--KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGP----GIDSRLIV   82 (175)
Q Consensus        11 ~~~C~~~~C~~~f~~~~~L~~h~~--~~~~~--~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~----~~~~~~~~   82 (175)
                      ++.|.  .|...|.....|..|..  .|.++  .++.|+...|++.|.....+..|...|.+..+...    ........
T Consensus       289 ~~~~~--~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  366 (467)
T COG5048         289 PIKSK--QCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPL  366 (467)
T ss_pred             CCCCc--cccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCccccccc
Confidence            56776  89999999999999999  79998  89999722599999999999999999887553211    10000000


Q ss_pred             cc-----cchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCC--cccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966          83 RE-----DFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK--PYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus        83 ~~-----~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~--~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      ..     ...............+....|...+.....+..|...+....  .+.+  ..|.+.+.....+..|++.+...
T Consensus       367 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~  444 (467)
T COG5048         367 LNNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKN--PPCSKSFNRHYNLIPHKKIHTNH  444 (467)
T ss_pred             cCCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCC--CcchhhccCcccccccccccccC
Confidence            00     001111112233444554457677777777777777776655  3566  88999999999999999999888


Q ss_pred             ccccCCcchh
Q psy8966         156 YTAEVPGSIL  165 (175)
Q Consensus       156 ~~~~C~~c~~  165 (175)
                      .+..|..++.
T Consensus       445 ~~~~~~~~~~  454 (467)
T COG5048         445 APLLCSILKS  454 (467)
T ss_pred             Cceeeccccc
Confidence            7777766553

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.05  E-value=0.0019  Score=29.09  Aligned_cols=18  Identities=28%  Similarity=0.761  Sum_probs=9.7

Q ss_pred             ccchHHHhchhhHHHHHH
Q psy8966         133 EFCSKSFKTSGDLQKHVR  150 (175)
Q Consensus       133 ~~C~~~f~~~~~l~~H~~  150 (175)
                      ..|++.|.+...|..|++
T Consensus         5 ~~C~k~f~~~~~~~~H~~   22 (27)
T PF12171_consen    5 DACDKYFSSENQLKQHMK   22 (27)
T ss_dssp             TTTTBBBSSHHHHHCCTT
T ss_pred             ccCCCCcCCHHHHHHHHc
Confidence            455555555555555544

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG4173|consensus

Probab=94.84  E-value=0.015  Score=39.45  Aligned_cols=91  Identities=29%  Similarity=0.572  Sum_probs=67.9

Q ss_pred             CccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhh
Q psy8966          11 PYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLR   90 (175)
Q Consensus        11 ~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~   90 (175)
                      .+.|++..|-.+|....+...|-.+.++.   .|..  |.+.|.+..-|..|+...+...                --..
T Consensus        79 ~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~--C~r~~Pt~hLLd~HI~E~HDs~----------------Fqa~  137 (253)
T KOG4173|consen   79 AFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSF--CKRAFPTGHLLDAHILEWHDSL----------------FQAL  137 (253)
T ss_pred             cccccccchHHHHhhhhhHHHhhhhcccc---hhHH--HHHhCCchhhhhHHHHHHHHHH----------------HHHH
Confidence            37787778999999988888887765553   7866  9999999999999987655311                0112


Q ss_pred             hccCCcceeccCCCcccccCCHHHHHHHH-hhh
Q psy8966          91 IHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTH  122 (175)
Q Consensus        91 ~~~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h  122 (175)
                      ...|..-|.|-+.+|+..|.+..+...|+ ..|
T Consensus       138 veRG~dMy~ClvEgCt~KFkT~r~RkdH~I~~H  170 (253)
T KOG4173|consen  138 VERGQDMYQCLVEGCTEKFKTSRDRKDHMIRMH  170 (253)
T ss_pred             HHcCccHHHHHHHhhhhhhhhhhhhhhHHHHhc
Confidence            23345678898889999999998888885 444

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=94.33  E-value=0.015  Score=26.13  Aligned_cols=22  Identities=27%  Similarity=0.824  Sum_probs=16.8

Q ss_pred             eeccccccCcccCChHHHHHHHHH
Q psy8966          42 YRCAHEFCSKSFKTSGDLQKHVRT   65 (175)
Q Consensus        42 ~~C~~~~C~~~f~~~~~l~~H~~~   65 (175)
                      |.|.  .|++.|.+...|..|+++
T Consensus         2 ~~C~--~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCD--ACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBT--TTTBBBSSHHHHHCCTTS
T ss_pred             CCcc--cCCCCcCCHHHHHHHHcc
Confidence            6784  488888888888887664

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.10  E-value=0.014  Score=27.69  Aligned_cols=24  Identities=17%  Similarity=0.278  Sum_probs=14.3

Q ss_pred             ccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchh
Q psy8966         128 YRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSIL  165 (175)
Q Consensus       128 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~  165 (175)
                      |+|  .+||+.+....            .++.||.||.
T Consensus         2 ~~C--~~CGy~y~~~~------------~~~~CP~Cg~   25 (33)
T cd00350           2 YVC--PVCGYIYDGEE------------APWVCPVCGA   25 (33)
T ss_pred             EEC--CCCCCEECCCc------------CCCcCcCCCC
Confidence            567  66776544221            6677777764

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>KOG1146|consensus

Probab=92.90  E-value=0.034  Score=47.62  Aligned_cols=140  Identities=18%  Similarity=0.300  Sum_probs=85.1

Q ss_pred             cchhhccChHHHHHHHh-hhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchh-hhhccCC
Q psy8966          18 YCEKAFSTQYSRKAHIR-THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVH-LRIHSGI   95 (175)
Q Consensus        18 ~C~~~f~~~~~L~~h~~-~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~   95 (175)
                      -|+..+.....+.-++. .+.-.+.+.|+.  |+..|.....|..||++-+.+..-  .............. .....+.
T Consensus       441 ~~e~~~~s~r~~~~~t~~L~S~~kt~~cpk--c~~~yk~a~~L~vhmRskhp~~~~--~~c~~gq~~~~~arg~~~~~~~  516 (1406)
T KOG1146|consen  441 KAEPLLESKRSLEGQTVVLHSFFKTLKCPK--CNWHYKLAQTLGVHMRSKHPESQS--AYCKAGQNHPRLARGEVYRCPG  516 (1406)
T ss_pred             chhhhhhhhcccccceeeeecccccccCCc--cchhhhhHHHhhhcccccccccch--hHhHhccccccccccccccCCC
Confidence            34444444444444443 244446689976  999999999999999984432211  00000000000000 0112235


Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhh--c-----------------------------------C------CCcccCCc
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTH--T-----------------------------------G------EKPYRCAH  132 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h--~-----------------------------------~------~~~~~C~~  132 (175)
                      +||.|.  .|...+....+|.+|+..-  .                                   +      ..+|.|  
T Consensus       517 ~p~~C~--~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C--  592 (1406)
T KOG1146|consen  517 KPYPCR--ACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRC--  592 (1406)
T ss_pred             Ccccce--eeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcch--
Confidence            788896  8999999999999997531  0                                   0      013999  


Q ss_pred             ccchHHHhchhhHHHHHHH-hcCCccccCCcchh
Q psy8966         133 EFCSKSFKTSGDLQKHVRT-HTGKYTAEVPGSIL  165 (175)
Q Consensus       133 ~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~c~~  165 (175)
                      .+|++--.-..+|+.||.. ++...|-.+-.++.
T Consensus       593 ~vc~yetniarnlrihmtss~~s~~p~~~Lq~~i  626 (1406)
T KOG1146|consen  593 EVCSYETNIARNLRIHMTASPSSSPPSLVLQQNI  626 (1406)
T ss_pred             hhhcchhhhhhccccccccCCCCCChHHHhhhcc
Confidence            9999999999999999974 44444455554443

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=92.16  E-value=0.07  Score=39.29  Aligned_cols=105  Identities=22%  Similarity=0.338  Sum_probs=60.6

Q ss_pred             CeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCC-c-------cchh-cccchhhhhccCC----cceeccCCCccc
Q psy8966          41 PYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGID-S-------RLIV-REDFVHLRIHSGI----RPYKCPVEYCEK  107 (175)
Q Consensus        41 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~-~-------~~~~-~~~~~~~~~~~~~----~~~~C~~~~C~~  107 (175)
                      .|.|+.+-|.........|+.|.++.++...|..+.. .       .++. ..+..|......+    +--.|.  .|..
T Consensus       151 ~F~CP~skc~~~C~~~k~lk~H~K~~H~~~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~--FC~~  228 (493)
T COG5236         151 SFKCPKSKCHRRCGSLKELKKHYKAQHGFVLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCI--FCKI  228 (493)
T ss_pred             HhcCCchhhhhhhhhHHHHHHHHHhhcCcEEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhh--hccc
Confidence            3777766677777777888888888777655443221 1       1111 1122233333222    122476  7999


Q ss_pred             ccCCHHHHHHHHhhhcCCCcccCCcccch----HHHhchhhHHHHHH
Q psy8966         108 AFSTQYSRKAHIRTHTGEKPYRCAHEFCS----KSFKTSGDLQKHVR  150 (175)
Q Consensus       108 ~f~~~~~l~~H~~~h~~~~~~~C~~~~C~----~~f~~~~~l~~H~~  150 (175)
                      .|-+...|..|.+.-+ ++-+.|  +.-+    .-|+.-.+|.+|.+
T Consensus       229 ~FYdDDEL~~HcR~~H-E~ChIC--D~v~p~~~QYFK~Y~~Le~HF~  272 (493)
T COG5236         229 YFYDDDELRRHCRLRH-EACHIC--DMVGPIRYQYFKSYEDLEAHFR  272 (493)
T ss_pred             eecChHHHHHHHHhhh-hhhhhh--hccCccchhhhhCHHHHHHHhh
Confidence            9999999999976542 344444  2222    24666667777765

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=92.15  E-value=0.079  Score=23.30  Aligned_cols=17  Identities=29%  Similarity=0.757  Sum_probs=8.0

Q ss_pred             ccchHHHhchhhHHHHHH
Q psy8966         133 EFCSKSFKTSGDLQKHVR  150 (175)
Q Consensus       133 ~~C~~~f~~~~~l~~H~~  150 (175)
                      +.||..| ....|..|++
T Consensus         6 ~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    6 PICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CCCCCEE-CHHHHHHHHH
Confidence            4455555 3344445543

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.55  E-value=0.21  Score=23.56  Aligned_cols=23  Identities=17%  Similarity=0.644  Sum_probs=18.4

Q ss_pred             CeeccccccCcccCChHHHHHHHHH
Q psy8966          41 PYRCAHEFCSKSFKTSGDLQKHVRT   65 (175)
Q Consensus        41 ~~~C~~~~C~~~f~~~~~l~~H~~~   65 (175)
                      +|.|  +.|+..|.+..++..|+..
T Consensus         3 ~~~C--~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYC--KLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEc--cccCCccCCHHHHHHHHCh
Confidence            4788  5599999988888888765

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>smart00451 ZnF_U1 U1-like zinc finger

Probab=91.47  E-value=0.096  Score=24.82  Aligned_cols=22  Identities=18%  Similarity=0.689  Sum_probs=14.7

Q ss_pred             cccCCcccchHHHhchhhHHHHHH
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVR  150 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~  150 (175)
                      +|.|  +.|+..|.....+..|++
T Consensus         3 ~~~C--~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYC--KLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEc--cccCCccCCHHHHHHHHC
Confidence            4567  667777776666666664

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=90.55  E-value=1  Score=33.47  Aligned_cols=74  Identities=19%  Similarity=0.281  Sum_probs=36.0

Q ss_pred             ccCcccCChHHHHHHHHHhcCC-CCCCCCCCccchhcccchhhhhccCCcceeccCCCccc----ccCCHHHHHHHHhh
Q psy8966          48 FCSKSFKTSGDLQKHVRTHTGK-YTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEK----AFSTQYSRKAHIRT  121 (175)
Q Consensus        48 ~C~~~f~~~~~l~~H~~~h~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~----~f~~~~~l~~H~~~  121 (175)
                      +|...|.+...|..|++..+.. ..|.........+.........|-..--|.|+.+.|..    .|.....|..|+..
T Consensus       225 FC~~~FYdDDEL~~HcR~~HE~ChICD~v~p~~~QYFK~Y~~Le~HF~~~hy~ct~qtc~~~k~~vf~~~~el~~h~~~  303 (493)
T COG5236         225 FCKIYFYDDDELRRHCRLRHEACHICDMVGPIRYQYFKSYEDLEAHFRNAHYCCTFQTCRVGKCYVFPYHTELLEHLTR  303 (493)
T ss_pred             hccceecChHHHHHHHHhhhhhhhhhhccCccchhhhhCHHHHHHHhhcCceEEEEEEEecCcEEEeccHHHHHHHHHH
Confidence            3777777777777777764432 23433333333333333333333333344444433432    35555556666543

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=90.23  E-value=0.095  Score=24.98  Aligned_cols=25  Identities=12%  Similarity=0.234  Sum_probs=16.8

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchh
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSIL  165 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~  165 (175)
                      .|+|  .+||+.+...            +.|-.||.||.
T Consensus         2 ~~~C--~~CG~i~~g~------------~~p~~CP~Cg~   26 (34)
T cd00729           2 VWVC--PVCGYIHEGE------------EAPEKCPICGA   26 (34)
T ss_pred             eEEC--CCCCCEeECC------------cCCCcCcCCCC
Confidence            3778  7788654422            25678888885

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=90.22  E-value=0.12  Score=34.33  Aligned_cols=24  Identities=21%  Similarity=0.411  Sum_probs=19.2

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcch
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSI  164 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~  164 (175)
                      +.|+|  ++||+...             |+.|-.||+||
T Consensus       133 ~~~vC--~vCGy~~~-------------ge~P~~CPiCg  156 (166)
T COG1592         133 KVWVC--PVCGYTHE-------------GEAPEVCPICG  156 (166)
T ss_pred             CEEEc--CCCCCccc-------------CCCCCcCCCCC
Confidence            36999  88997443             68999999998

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=89.83  E-value=0.17  Score=31.18  Aligned_cols=14  Identities=14%  Similarity=0.024  Sum_probs=7.9

Q ss_pred             CCccccCCcchhhh
Q psy8966         154 GKYTAEVPGSILDC  167 (175)
Q Consensus       154 ~~~~~~C~~c~~~~  167 (175)
                      ++.|-.||+||..|
T Consensus        23 nk~PivCP~CG~~~   36 (108)
T PF09538_consen   23 NKDPIVCPKCGTEF   36 (108)
T ss_pred             CCCCccCCCCCCcc
Confidence            44566666666544

The function of members of this family is unknown.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=89.10  E-value=0.058  Score=41.13  Aligned_cols=63  Identities=33%  Similarity=0.628  Sum_probs=51.3

Q ss_pred             ceeccCCCcccccCCHHHHHHHHh--hhcCC--CcccCCcc--cchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIR--THTGE--KPYRCAHE--FCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~~~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      ++.|.  .|...|.....|..|..  .|.++  +++.|  +  .|++.|.....+.+|...|++..+..+..-
T Consensus       289 ~~~~~--~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~--p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  357 (467)
T COG5048         289 PIKSK--QCNISFSRSSPLTRHLRSVNHSGESLKPFSC--PYSLCGKLFSRNDALKRHILLHTSISPAKEKLL  357 (467)
T ss_pred             CCCCc--cccCCccccccccccccccccccccCCceee--eccCCCccccccccccCCcccccCCCccccccc
Confidence            46665  88888888888888988  78888  88999  6  699999999888899888888766666543

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=88.56  E-value=0.23  Score=26.67  Aligned_cols=32  Identities=9%  Similarity=0.075  Sum_probs=15.8

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchh
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSIL  165 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~  165 (175)
                      .|.|  +.||..-..+....+     ....+|.|+.||+
T Consensus        27 ~F~C--PnCGe~~I~Rc~~CR-----k~g~~Y~Cp~CGF   58 (61)
T COG2888          27 KFPC--PNCGEVEIYRCAKCR-----KLGNPYRCPKCGF   58 (61)
T ss_pred             EeeC--CCCCceeeehhhhHH-----HcCCceECCCcCc
Confidence            3666  556654443332222     1235667777664

>KOG2893|consensus

Probab=88.11  E-value=0.16  Score=35.48  Aligned_cols=40  Identities=25%  Similarity=0.591  Sum_probs=33.1

Q ss_pred             CCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHH
Q psy8966         103 EYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH  148 (175)
Q Consensus       103 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H  148 (175)
                      +.|++.|.+...|.+|++    .|-|+|  -+|.+...+--.|..|
T Consensus        14 wycnrefddekiliqhqk----akhfkc--hichkkl~sgpglsih   53 (341)
T KOG2893|consen   14 WYCNREFDDEKILIQHQK----AKHFKC--HICHKKLFSGPGLSIH   53 (341)
T ss_pred             eecccccchhhhhhhhhh----hcccee--eeehhhhccCCCceee
Confidence            489999999999999965    457999  9999988777666655

>KOG2893|consensus

Probab=87.65  E-value=0.19  Score=35.16  Aligned_cols=50  Identities=24%  Similarity=0.612  Sum_probs=38.6

Q ss_pred             CCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHH-HHHhc
Q psy8966           9 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH-VRTHT   67 (175)
Q Consensus         9 ~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~   67 (175)
                      .++|-+   .|++.|.+..-|.+|++.    +-|+|  .+|.+...+...|..| |.+|.
T Consensus         9 ~kpwcw---ycnrefddekiliqhqka----khfkc--hichkkl~sgpglsihcmqvhk   59 (341)
T KOG2893|consen    9 DKPWCW---YCNREFDDEKILIQHQKA----KHFKC--HICHKKLFSGPGLSIHCMQVHK   59 (341)
T ss_pred             CCceee---ecccccchhhhhhhhhhh----cccee--eeehhhhccCCCceeehhhhhh
Confidence            356655   899999999999999875    34899  5599987777777777 55564

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=86.69  E-value=0.22  Score=22.13  Aligned_cols=9  Identities=22%  Similarity=0.069  Sum_probs=5.3

Q ss_pred             cCCcchhhh
Q psy8966         159 EVPGSILDC  167 (175)
Q Consensus       159 ~C~~c~~~~  167 (175)
                      .|+.||+.|
T Consensus        16 ~Cp~CG~~F   24 (26)
T PF10571_consen   16 FCPHCGYDF   24 (26)
T ss_pred             cCCCCCCCC
Confidence            566666655

Several members are annotated as putative helicases.

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=85.60  E-value=0.23  Score=25.22  Aligned_cols=11  Identities=0%  Similarity=-0.260  Sum_probs=6.4

Q ss_pred             ccccCCcchhh
Q psy8966         156 YTAEVPGSILD  166 (175)
Q Consensus       156 ~~~~C~~c~~~  166 (175)
                      .+..|+.||..
T Consensus        18 ~~irC~~CG~r   28 (44)
T smart00659       18 DVVRCRECGYR   28 (44)
T ss_pred             CceECCCCCce
Confidence            55666666644

present in RNA polymerase I, II and III

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=84.75  E-value=0.28  Score=26.43  Aligned_cols=10  Identities=10%  Similarity=0.019  Sum_probs=6.9

Q ss_pred             ccccCCcchh
Q psy8966         156 YTAEVPGSIL  165 (175)
Q Consensus       156 ~~~~C~~c~~  165 (175)
                      .+|.|+.||+
T Consensus        47 ~~Y~CP~CGF   56 (59)
T PRK14890         47 NPYTCPKCGF   56 (59)
T ss_pred             CceECCCCCC
Confidence            5677777765

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=84.09  E-value=0.82  Score=24.22  Aligned_cols=25  Identities=24%  Similarity=0.551  Sum_probs=13.1

Q ss_pred             CCCCccCCCccchhhccChHHHHHHHh
Q psy8966           8 GIRPYKCPVEYCEKAFSTQYSRKAHIR   34 (175)
Q Consensus         8 ~~~~~~C~~~~C~~~f~~~~~L~~h~~   34 (175)
                      |+.-+.|+  -||..|....+..+|++
T Consensus        14 GE~~lrCP--RC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          14 GEEFLRCP--RCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             CceeeeCC--chhHHHHHhHHHHHHhh
Confidence            44445554  55555555555555554

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=83.42  E-value=0.54  Score=29.60  Aligned_cols=13  Identities=15%  Similarity=0.475  Sum_probs=6.1

Q ss_pred             CcccCCcccchHHHh
Q psy8966         126 KPYRCAHEFCSKSFK  140 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~  140 (175)
                      .|..|  ++||..|.
T Consensus        25 ~p~vc--P~cg~~~~   37 (129)
T TIGR02300        25 RPAVS--PYTGEQFP   37 (129)
T ss_pred             CCccC--CCcCCccC
Confidence            34455  44554443

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=82.86  E-value=0.96  Score=29.97  Aligned_cols=30  Identities=10%  Similarity=0.134  Sum_probs=21.6

Q ss_pred             CCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchh
Q psy8966         125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSIL  165 (175)
Q Consensus       125 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~  165 (175)
                      ..-|.|  +.|+..|....++.         .-|.||.||.
T Consensus       107 ~~~Y~C--p~c~~r~tf~eA~~---------~~F~Cp~Cg~  136 (158)
T TIGR00373       107 NMFFIC--PNMCVRFTFNEAME---------LNFTCPRCGA  136 (158)
T ss_pred             CCeEEC--CCCCcEeeHHHHHH---------cCCcCCCCCC
Confidence            345888  77888887777663         3688888874

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PHA00626 hypothetical protein

Probab=82.32  E-value=0.18  Score=26.70  Aligned_cols=13  Identities=23%  Similarity=0.409  Sum_probs=6.2

Q ss_pred             CcccCCcccchHHHh
Q psy8966         126 KPYRCAHEFCSKSFK  140 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~  140 (175)
                      ..|+|  +.||+.|.
T Consensus        22 nrYkC--kdCGY~ft   34 (59)
T PHA00626         22 DDYVC--CDCGYNDS   34 (59)
T ss_pred             cceEc--CCCCCeec
Confidence            34555  44555444

>KOG1146|consensus

Probab=81.68  E-value=0.95  Score=39.47  Aligned_cols=56  Identities=34%  Similarity=0.694  Sum_probs=43.0

Q ss_pred             ccCCcceeccCCCcccccCCHHHHHHHHhh-hc------------------------CCCcccCCcccchHHHhchhhHH
Q psy8966          92 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRT-HT------------------------GEKPYRCAHEFCSKSFKTSGDLQ  146 (175)
Q Consensus        92 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~------------------------~~~~~~C~~~~C~~~f~~~~~l~  146 (175)
                      +...+.+.|+  .|+..|.....|..|++. |.                        +-++|.|  ..|...+..+.+|.
T Consensus       460 ~S~~kt~~cp--kc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C--~~C~~stttng~Ls  535 (1406)
T KOG1146|consen  460 HSFFKTLKCP--KCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPC--RACNYSTTTNGNLS  535 (1406)
T ss_pred             ecccccccCC--ccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccc--eeeeeeeecchHHH
Confidence            3345677887  899999999899999876 11                        1246888  88999999999999


Q ss_pred             HHHHH
Q psy8966         147 KHVRT  151 (175)
Q Consensus       147 ~H~~~  151 (175)
                      +|+.+
T Consensus       536 ihlqS  540 (1406)
T KOG1146|consen  536 IHLQS  540 (1406)
T ss_pred             HHHHH
Confidence            99874

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=80.91  E-value=0.44  Score=23.41  Aligned_cols=10  Identities=20%  Similarity=-0.134  Sum_probs=5.4

Q ss_pred             ccccCCcchh
Q psy8966         156 YTAEVPGSIL  165 (175)
Q Consensus       156 ~~~~C~~c~~  165 (175)
                      ..-.||.||.
T Consensus        25 ~~~~CP~Cg~   34 (41)
T smart00834       25 PLATCPECGG   34 (41)
T ss_pred             CCCCCCCCCC
Confidence            4445666654

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=80.76  E-value=1.5  Score=23.31  Aligned_cols=25  Identities=36%  Similarity=0.707  Sum_probs=14.0

Q ss_pred             CCCcccCCcccchHHHhchhhHHHHHH
Q psy8966         124 GEKPYRCAHEFCSKSFKTSGDLQKHVR  150 (175)
Q Consensus       124 ~~~~~~C~~~~C~~~f~~~~~l~~H~~  150 (175)
                      |+.-+.|  +.|+..|....+..+|..
T Consensus        14 GE~~lrC--PRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          14 GEEFLRC--PRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             CceeeeC--CchhHHHHHhHHHHHHhh
Confidence            3444556  556666666666655553

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=80.11  E-value=1.1  Score=30.32  Aligned_cols=29  Identities=17%  Similarity=0.301  Sum_probs=19.9

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchh
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSIL  165 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~  165 (175)
                      .-|.|  +.|+..|....++         +.-|.||.||.
T Consensus       116 ~~Y~C--p~C~~rytf~eA~---------~~~F~Cp~Cg~  144 (178)
T PRK06266        116 MFFFC--PNCHIRFTFDEAM---------EYGFRCPQCGE  144 (178)
T ss_pred             CEEEC--CCCCcEEeHHHHh---------hcCCcCCCCCC
Confidence            44888  6688777766655         24688888873

>PF07754 DUF1610: Domain of unknown function (DUF1610); InterPro: IPR011668 This domain is found in archaeal species

Probab=80.07  E-value=0.69  Score=20.10  Aligned_cols=9  Identities=11%  Similarity=-0.005  Sum_probs=4.5

Q ss_pred             ccccCCcch
Q psy8966         156 YTAEVPGSI  164 (175)
Q Consensus       156 ~~~~C~~c~  164 (175)
                      .+|.||.||
T Consensus        15 v~f~CPnCG   23 (24)
T PF07754_consen   15 VPFPCPNCG   23 (24)
T ss_pred             ceEeCCCCC
Confidence            345555554

It is likely to bind zinc via its four well-conserved cysteine residues.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	175
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		1e-26
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		2e-16
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		2e-06
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		3e-15
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-14
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-14
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		2e-06
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		2e-14
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-14
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		7e-12
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		3e-13
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		2e-12
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		1e-11
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		4e-12
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		3e-11
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		2e-11
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		7e-11
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		2e-11
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		7e-11
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		3e-11
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-10
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		4e-11
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		1e-10
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		5e-11
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		2e-10
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		5e-11
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		2e-10
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		5e-11
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		2e-10
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		3e-10
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		3e-10
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		1e-09
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		4e-08
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-09
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		2e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		4e-09
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		4e-08
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-08
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		2e-07
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-07
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-07
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-07
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-07
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		3e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		8e-07
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		1e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		8e-06
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		8e-06
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		1e-05
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		2e-05
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		1e-05
2j7j_A	85	Invariance Of The Zinc Finger Module: A Comparison		1e-05
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		1e-05
1un6_B	87	The Crystal Structure Of A Zinc Finger - Rna Comple		1e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-05
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		3e-05
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		5e-05
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		5e-05
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-04
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		2e-04
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		3e-04
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		4e-04
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		6e-04
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		6e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  115 bits (288), Expect = 1e-26,   Method: Compositional matrix adjust.
 Identities = 74/159 (46%), Positives = 90/159 (56%), Gaps = 10/159 (6%)
Query: 2   HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
           H R H+G +PYKCP   C K+FS +     H RTHTGEKPY+C    C KSF    +L+ 
Sbjct: 40  HQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLRA 95
Query: 62  HVRTHTGK--YTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI 119
           H RTHTG+  Y       S   +     H R H+G +PYKCP   C K+FS + +   H 
Sbjct: 96  HQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPE--CGKSFSREDNLHTHQ 153
Query: 120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTA 158
           RTHTGEKPY+C    C KSF     L  H RTHTGK T+
Sbjct: 154 RTHTGEKPYKCPE--CGKSFSRRDALNVHQRTHTGKKTS 190

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 82.0 bits (201), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 53/149 (35%), Positives = 70/149 (46%), Gaps = 6/149 (4%)
Query: 12  YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT 71
           Y C    C  A++  +  +AH+  HTGEKP+ C  E C K F +   L +H  THTG+  
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72
Query: 72  ---PGPGIDSRLIVREDF-VHL-RIHS-GIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 125
                 G D R   + +   H  R H+  I  Y C  E C KAF      K H  +HT +
Sbjct: 73  FTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQ 132
Query: 126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
            PY C HE C K F     L++H + H G
Sbjct: 133 LPYECPHEGCDKRFSLPSRLKRHEKVHAG 161

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 26/70 (37%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 98  YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK-- 155
           Y C    C  A++  +  +AH+  HTGEKP+ C  E C K F +   L +H  THTG+  
Sbjct: 13  YICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKN 72
Query: 156 YTAEVPGSIL 165
           +T +  G  L
Sbjct: 73  FTCDSDGCDL 82

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 77.8 bits (190), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/151 (34%), Positives = 70/151 (46%), Gaps = 30/151 (19%)
Query: 5   IHSGIRPYKCPVEYCEKA---FSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
           IH   + + C    C +    F  QY    H+R HTGEKP++C  E C KS+    +L+ 
Sbjct: 28  IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKT 87
Query: 62  HVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAH-IR 120
           H+R+HTG+                          +PY C  E C KAFS    R  H  R
Sbjct: 88  HLRSHTGE--------------------------KPYMCEHEGCSKAFSNASDRAKHQNR 121
Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRT 151
           TH+ EKPY C    C+K +     L+KHV+T
Sbjct: 122 THSNEKPYVCKLPGCTKRYTDPSSLRKHVKT 152

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 75.5 bits (184), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 38/80 (47%), Positives = 53/80 (66%), Gaps = 3/80 (3%)
Query: 86  FVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDL 145
            VH+R H+G +P+KC  E C K++S   + K H+R+HTGEKPY C HE CSK+F  + D 
Sbjct: 56  VVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDR 115
Query: 146 QKHV-RTHTGK--YTAEVPG 162
            KH  RTH+ +  Y  ++PG
Sbjct: 116 AKHQNRTHSNEKPYVCKLPG 135

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 75.5 bits (184), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 48/146 (32%), Positives = 65/146 (44%), Gaps = 28/146 (19%)
Query: 7   SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 66
           S  RP+ C    C K +      + H R HTGEKPY+C  + C + F  S  L++H R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 67  TGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
           TG                          ++P++C    C++ FS     K H RTHTGEK
Sbjct: 62  TG--------------------------VKPFQCKT--CQRKFSRSDHLKTHTRTHTGEK 93
Query: 127 PYRCAHEFCSKSFKTSGDLQKHVRTH 152
           P+ C    C K F  S +L +H   H
Sbjct: 94  PFSCRWPSCQKKFARSDELVRHHNMH 119

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 48.5 bits (114), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 25/62 (40%), Positives = 33/62 (53%)
Query: 93  SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 152
           S  RP+ C    C K +      + H R HTGEKPY+C  + C + F  S  L++H R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 153 TG 154
           TG
Sbjct: 62  TG 63

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 75.1 bits (183), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 39/117 (33%), Positives = 64/117 (54%), Gaps = 13/117 (11%)
Query: 44  CAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFV-------HLRIHSGIR 96
           C H+ C+K F+ +  ++KH+ TH      GP +       + FV       H  +H+G +
Sbjct: 8   CPHKGCTKMFRDNSAMRKHLHTH------GPRVHVCAECGKAFVESSKLKRHQLVHTGEK 61
Query: 97  PYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 153
           P++C  E C K FS  ++ + H+R HTG++PY C  + C+K F  S +L+ H+ TH 
Sbjct: 62  PFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 50/117 (42%), Positives = 58/117 (49%), Gaps = 32/117 (27%)
Query: 39  EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPY 98
           EKPY+C    C KSF  S +LQKH RTHTG+                          +PY
Sbjct: 2   EKPYKCPE--CGKSFSQSSNLQKHQRTHTGE--------------------------KPY 33
Query: 99  KCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           KCP   C K+FS     + H RTHTGEKPY+C    C KSF  S  L +H RTH  K
Sbjct: 34  KCPE--CGKSFSQSSDLQKHQRTHTGEKPYKCPE--CGKSFSRSDHLSRHQRTHQNK 86

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 66.6 bits (161), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 36/66 (54%), Positives = 43/66 (65%), Gaps = 4/66 (6%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           +PYKCP   C K+FS   + + H RTHTGEKPY+C    C KSF  S DLQKH RTHTG+
Sbjct: 3   KPYKCPE--CGKSFSQSSNLQKHQRTHTGEKPYKCPE--CGKSFSQSSDLQKHQRTHTGE 58
Query: 156 YTAEVP 161
              + P
Sbjct: 59  KPYKCP 64

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 41/128 (32%), Positives = 63/128 (49%), Gaps = 17/128 (13%)
Query: 49  CSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVRED--------------FVHLRIHSG 94
           C ++F T  +L  HV   T ++  GP  ++ +   E+                H+R+H+G
Sbjct: 31  CDRTFSTMHELVTHV---TMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTG 87
Query: 95  IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
            +P+ CP   C K F+   + K H RTHTGEKP++C  E C + F  S D +KH+  HT 
Sbjct: 88  EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 147
Query: 155 KYTAEVPG 162
             +    G
Sbjct: 148 DKSGPSSG 155

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 68.6 bits (166), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 57/117 (48%), Gaps = 30/117 (25%)
Query: 10  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
           RPY CPVE C++ FS + +   HIR HTG+KP++C    C ++F     L  H+RTHTG+
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQC--RICMRNFSQQASLNAHIRTHTGE 60
Query: 70  YTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
                                     +P+ C +  C + F+T ++R  H + H  +K
Sbjct: 61  --------------------------KPFACDI--CGRKFATLHTRTRHTKIHLRQK 89

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 66.2 bits (160), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 46/80 (57%), Gaps = 4/80 (5%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           RPY CPVE C++ FS + +   HIR HTG+KP++C    C ++F     L  H+RTHTG+
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQC--RICMRNFSQQASLNAHIRTHTGE 60
Query: 156 --YTAEVPGSILDCLSGRFR 173
             +  ++ G     L  R R
Sbjct: 61  KPFACDICGRKFATLHTRTR 80

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 67.4 bits (163), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 30/117 (25%)
Query: 10  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
           RPY CPVE C++ FS + +   HIR HTG+KP++C    C ++F     L +H+RTHTG+
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQC--RICMRNFSQHTGLNQHIRTHTGE 60
Query: 70  YTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
                                     +P+ C +  C + F+T ++R  H + H  +K
Sbjct: 61  --------------------------KPFACDI--CGRKFATLHTRDRHTKIHLRQK 89

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 64.7 bits (156), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 47/80 (58%), Gaps = 4/80 (5%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           RPY CPVE C++ FS + +   HIR HTG+KP++C    C ++F     L +H+RTHTG+
Sbjct: 3   RPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQC--RICMRNFSQHTGLNQHIRTHTGE 60
Query: 156 --YTAEVPGSILDCLSGRFR 173
             +  ++ G     L  R R
Sbjct: 61  KPFACDICGRKFATLHTRDR 80

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 65.5 bits (158), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 34/76 (44%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          RPY CPVE C++ FS   S   HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3  RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60
Query: 70 YTPGPGIDSRLIVRED 85
                I  R   R D
Sbjct: 61 KPFACDICGRKFARSD 76

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 30/60 (50%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           RPY CPVE C++ FS   S   HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 65.1 bits (157), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 43/76 (56%), Gaps = 2/76 (2%)
Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          RPY CPVE C++ FS   +   HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3  RPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60
Query: 70 YTPGPGIDSRLIVRED 85
                I  R   R D
Sbjct: 61 KPFACDICGRKFARSD 76

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 63.2 bits (152), Expect = 7e-11,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 39/60 (65%), Gaps = 2/60 (3%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           RPY CPVE C++ FS   +   HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3   RPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 64.3 bits (155), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3  RPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60
Query: 70 YTPGPGIDSRLIVRED 85
                I  R   R D
Sbjct: 61 KPFACDICGRKFARSD 76

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 62.4 bits (150), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3   RPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 64.3 bits (155), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3  RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60
Query: 70 YTPGPGIDSRLIVRED 85
                I  R   R D
Sbjct: 61 KPFACDICGRKFARSD 76

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3   RPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60
Query: 70 YTPGPGIDSRLIVRED 85
                I  R   R D
Sbjct: 61 KPFACDICGRKFARSD 76

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 2  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 59
Query: 70 YTPGPGIDSRLIVRED 85
                I  R   R D
Sbjct: 60 KPFACDICGRKFARSD 75

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 2   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 59

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 63.5 bits (153), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 33/76 (43%), Positives = 42/76 (55%), Gaps = 2/76 (2%)
Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60
Query: 70 YTPGPGIDSRLIVRED 85
                I  R   R D
Sbjct: 61 KPFACDICGRKFARSD 76

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 62.0 bits (149), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 29/60 (48%), Positives = 38/60 (63%), Gaps = 2/60 (3%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3   RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 9  IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 67
          +RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHT
Sbjct: 17 MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHT 73

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 37/59 (62%), Gaps = 2/59 (3%)
Query: 95  IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 153
           +RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+RTHT
Sbjct: 17  MRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHT 73

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 59.3 bits (142), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 34/83 (40%), Positives = 44/83 (53%), Gaps = 2/83 (2%)
Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          R + C    C K ++     KAH+RTHTGEKPY+C  E C   F  S +L +H R HTG 
Sbjct: 14 RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGA 73
Query: 70 YTPGPGIDSRLIVREDFVHLRIH 92
               G+ +R   R D  HL +H
Sbjct: 74 KPFQCGVCNRSFSRSD--HLALH 94

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 27/59 (45%), Positives = 34/59 (57%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           R + C    C K ++     KAH+RTHTGEKPY+C  E C   F  S +L +H R HTG
Sbjct: 14  RIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG 72

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           HL IHS  RPY  P +YC K F  +   K H   HTGEKP++C  + C K+F  S +L 
Sbjct: 19 THLLIHSDTRPY--PCQYCGKRFHQKSDMKKHTFIHTGEKPHKC--QVCGKAFSQSSNLI 74
Query: 61 KHVRTHTG 68
           H R HTG
Sbjct: 75 THSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 58.5 bits (140), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 32/68 (47%), Positives = 39/68 (57%), Gaps = 4/68 (5%)
Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 146
            HL IHS  RPY  P +YC K F  +   K H   HTGEKP++C  + C K+F  S +L 
Sbjct: 19  THLLIHSDTRPY--PCQYCGKRFHQKSDMKKHTFIHTGEKPHKC--QVCGKAFSQSSNLI 74
Query: 147 KHVRTHTG 154
            H R HTG
Sbjct: 75  THSRKHTG 82

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 57.4 bits (137), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 27/75 (36%), Positives = 44/75 (58%), Gaps = 4/75 (5%)
Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           H+R H+G++PYKC  + C+ A +   S   H+R H+ E+P++C  + C  + + S  L 
Sbjct: 26 THMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERPFKC--QICPYASRNSSQLT 81
Query: 61 KHVRTHTGKYTPGPG 75
           H+R+HTG   P  G
Sbjct: 82 VHLRSHTGDSGPSSG 96

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 53.9 bits (128), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 4/68 (5%)
Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 146
            H+R H+G++PYKC  + C+ A +   S   H+R H+ E+P++C  + C  + + S  L 
Sbjct: 26  THMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERPFKC--QICPYASRNSSQLT 81
Query: 147 KHVRTHTG 154
            H+R+HTG
Sbjct: 82  VHLRSHTG 89

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 68/149 (45%), Gaps = 32/149 (21%)
Query: 7   SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 66
           SG    +CP   C K F ++Y  K H R HTGEKP+ C    C K +    +L +H   +
Sbjct: 3   SGSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARN 58
Query: 67  TGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
                         + R + V          + C V  C++ F  +   + H+ +HTGE 
Sbjct: 59  C-------------MNRSEQV----------FTCSV--CQETFRRRMELRLHMVSHTGEM 93
Query: 127 PYRCAHEFCSKSFKTSGDLQKH-VRTHTG 154
           PY+C+   CS+ F    DLQ H ++ H+G
Sbjct: 94  PYKCSS--CSQQFMQKKDLQSHMIKLHSG 120

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 52.0 bits (123), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 28/109 (25%)
Query: 14  CPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPG 73
           C    C K ++     KAH+RTHTGEKPY C  + C   F  S +L +H R HTG     
Sbjct: 9   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH---- 64
Query: 74  PGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTH 122
                                 RP++C  + C++AFS       H++ H
Sbjct: 65  ----------------------RPFQC--QKCDRAFSRSDHLALHMKRH 89

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 31/55 (56%)
Query: 100 CPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           C    C K ++     KAH+RTHTGEKPY C  + C   F  S +L +H R HTG
Sbjct: 9   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG 63

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           HL  H+G +P+ C  E CEK F++ +    H  THTGEK + C  + C   F T  +++
Sbjct: 23 AHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMK 82
Query: 61 KHVR 64
          KH  
Sbjct: 83 KHFN 86

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 24/64 (37%), Positives = 35/64 (54%)
Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 146
            HL  H+G +P+ C  E CEK F++ +    H  THTGEK + C  + C   F T  +++
Sbjct: 23  AHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMK 82
Query: 147 KHVR 150
           KH  
Sbjct: 83  KHFN 86

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 51.6 bits (122), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 34/109 (31%), Positives = 47/109 (43%), Gaps = 28/109 (25%)
Query: 14  CPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPG 73
           C    C K ++     KAH+RTHTGEKPY C  + C   F  S +L +H R HTG     
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGH---- 63
Query: 74  PGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTH 122
                                 RP++C  + C++AFS       H++ H
Sbjct: 64  ----------------------RPFQC--QKCDRAFSRSDHLALHMKRH 88

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 51.2 bits (121), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 31/55 (56%)
Query: 100 CPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           C    C K ++     KAH+RTHTGEKPY C  + C   F  S +L +H R HTG
Sbjct: 8   CDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG 62

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 49.7 bits (117), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 4/71 (5%)
Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 147
           H+ +H G+RPY C V  C K F  ++    H++ HTG KPY C    C+K F       +
Sbjct: 28  HMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYEC--NICAKRFMWRDSFHR 83
Query: 148 HVRTHTGKYTA 158
           HV + T  Y A
Sbjct: 84  HVTSCTKSYEA 94

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 49.3 bits (116), Expect = 1e-06,   Method: Compositional matrix adjust.
 Identities = 31/82 (37%), Positives = 40/82 (48%), Gaps = 14/82 (17%)
Query: 71  TPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
           + GP IDS              S IR + C    C K +      KAH RTHTGEKP+ C
Sbjct: 5   SSGPQIDS--------------SRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSC 50
Query: 131 AHEFCSKSFKTSGDLQKHVRTH 152
           + + C + F  S +L +H RTH
Sbjct: 51  SWKGCERRFARSDELSRHRRTH 72

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          +PYKC  + C+ +F  + +  +H   HTGEKPYRC    C   F    +L+ H R H+G+
Sbjct: 16 KPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPANLKTHTRIHSGE 71

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 23/60 (38%), Positives = 34/60 (56%), Gaps = 4/60 (6%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           +PYKC  + C+ +F  + +  +H   HTGEKPYRC    C   F    +L+ H R H+G+
Sbjct: 16  KPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPANLKTHTRIHSGE 71

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/64 (45%), Positives = 34/64 (53%), Gaps = 4/64 (6%)
Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          +PY C VE C KAFS       H R HTGEKPY+C    C K+F  +  L  H R HT  
Sbjct: 13 KPYGC-VE-CGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSG 68
Query: 70 YTPG 73
           + G
Sbjct: 69 PSSG 72

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 45.4 bits (106), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/58 (48%), Positives = 32/58 (55%), Gaps = 4/58 (6%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 153
           +PY C VE C KAFS       H R HTGEKPY+C    C K+F  +  L  H R HT
Sbjct: 13  KPYGC-VE-CGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHT 66

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 12 YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          Y C  E C KAF      K H  +HT + PY C HE C K F     L++H + H G
Sbjct: 2  YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|2J7J|A Chain A, Invariance Of The Zinc Finger Module: A Comparison Of The Free Structure With Those In Nucleic-Acid Complexes Length = 85

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 98  YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           Y C  E C KAF      K H  +HT + PY C HE C K F     L++H + H G
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 12 YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          Y C  E C KAF      K H  +HT + PY C HE C K F     L++H + H G
Sbjct: 2  YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|1UN6|B Chain B, The Crystal Structure Of A Zinc Finger - Rna Complex Reveals Two Modes Of Molecular Recognition Length = 87

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 23/57 (40%), Positives = 28/57 (49%)
Query: 98  YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           Y C  E C KAF      K H  +HT + PY C HE C K F     L++H + H G
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          R YKC  + C K+FS       H RTHTGEKPY+C  + C K+F     L  H R HTG
Sbjct: 17 RRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGHHRVHTG 71

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 44.7 bits (104), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 28/59 (47%), Positives = 33/59 (55%), Gaps = 4/59 (6%)
Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           R YKC  + C K+FS       H RTHTGEKPY+C  + C K+F     L  H R HTG
Sbjct: 17  RRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGHHRVHTG 71

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 18 YCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 66
          YC K F + Y    H+RTHTGEKPY+C  EFC  +      L+ H+  H
Sbjct: 9  YCGKFFRSNYYLNIHLRTHTGEKPYKC--EFCEYAAAQKTSLRYHLERH 55

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 43.9 bits (102), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 22/49 (44%), Positives = 28/49 (57%), Gaps = 2/49 (4%)
Query: 104 YCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 152
           YC K F + Y    H+RTHTGEKPY+C  EFC  +      L+ H+  H
Sbjct: 9   YCGKFFRSNYYLNIHLRTHTGEKPYKC--EFCEYAAAQKTSLRYHLERH 55

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 9  IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH 62
          ++P++C +  C + FS       HIRTHTGEKP+ C  + C + F  S + ++H
Sbjct: 1  MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRH 50

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 20/54 (37%), Positives = 32/54 (59%), Gaps = 4/54 (7%)
Query: 95  IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH 148
           ++P++C +  C + FS       HIRTHTGEKP+ C  + C + F  S + ++H
Sbjct: 1   MKPFQCRI--CMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRH 50

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 41.2 bits (95), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 26/75 (34%), Positives = 35/75 (46%), Gaps = 4/75 (5%)
Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           +H R H+  RPY C +  C KAF  Q   + H   H+ EKP++C  + C K F  S  L 
Sbjct: 35  IHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSKEKPFKC--QECGKGFCQSRTLA 90
Query: 61  KHVRTHTGKYTPGPG 75
            H   H    +P   
Sbjct: 91  VHKTLHMQTSSPTAA 105

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 40.8 bits (94), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 28/79 (35%), Positives = 38/79 (48%), Gaps = 7/79 (8%)
Query: 2   HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
           H  IHS  + Y  P  YCEK F     R  H   HTGE+ Y+C    C KSF     +  
Sbjct: 41  HFNIHSWEKKY--PCRYCEKVFPLAEYRTKHEIHHTGERRYQCL--ACGKSFINYQFMSS 96
Query: 62  HVRTHTGKYTPGPGIDSRL 80
           H+++    ++  P  DS+L
Sbjct: 97  HIKS---VHSQDPSGDSKL 112

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 30 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT 65
          K HIRTHT  +PY C   +C+ SFKT G+L KH+++
Sbjct: 18 KKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHMKS 51

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 40.0 bits (92), Expect = 6e-04,   Method: Compositional matrix adjust.
 Identities = 19/36 (52%), Positives = 26/36 (72%), Gaps = 2/36 (5%)
Query: 116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT 151
           K HIRTHT  +PY C   +C+ SFKT G+L KH+++
Sbjct: 18  KKHIRTHTDVRPYHCT--YCNFSFKTKGNLTKHMKS 51

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	175
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-48
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-44
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	3e-37
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	5e-35
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	6e-47
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-40
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-34
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	2e-29
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-44
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-36
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	1e-43
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	3e-34
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-30
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	5e-42
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-34
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-29
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	7e-13
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-36
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	8e-36
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-35
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-27
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-25
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-32
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	3e-21
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	1e-30
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	4e-29
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	7e-23
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	5e-09
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-28
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-27
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	7e-20
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-12
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	8e-28
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	6e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-12
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	1e-27
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-26
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-18
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	5e-26
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	9e-26
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	3e-21
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	7e-06
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-25
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-21
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-18
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	3e-17
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-23
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-22
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-22
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	4e-15
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	1e-22
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	5e-20
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	3e-13
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-22
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	3e-22
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	1e-15
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-22
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-21
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-19
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-18
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	5e-22
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-10
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-10
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-20
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	5e-20
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-19
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-18
2epa_A	72	Krueppel-like factor 10; transforming growth facto	7e-20
2epa_A	72	Krueppel-like factor 10; transforming growth facto	7e-20
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-13
2epa_A	72	Krueppel-like factor 10; transforming growth facto	2e-08
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-07
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-19
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	5e-19
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	6e-19
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-19
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	6e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-18
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-18
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	8e-17
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	2e-09
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-18
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	7e-18
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-17
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	3e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-17
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	3e-17
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-14
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	4e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	7e-17
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	4e-16
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-09
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	2e-16
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	6e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	5e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	8e-15
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-14
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-13
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-13
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	4e-12
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-13
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-07
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	5e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-12
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-12
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-10
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-10
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-09
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-09
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-11
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-09
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-11
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-11
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-11
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	5e-11
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-11
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-11
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-11
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	6e-11
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-09
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-09
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-11
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	7e-11
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-09
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-09
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-11
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-08
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-11
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-11
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-11
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	8e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-11
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-08
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-09
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-09
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-10
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	1e-10
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-10
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-08
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-09
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-09
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	2e-10
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-07
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-06
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	5e-06
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-10
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-10
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-09
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	3e-09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	4e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-09
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-08
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-08
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-10
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-09
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-10
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	4e-10
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-09
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-09
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-10
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-09
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	6e-10
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-09
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-09
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-10
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-10
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-10
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-10
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	8e-10
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	8e-10
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-09
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-10
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-10
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-09
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-10
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-10
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-09
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-08
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-09
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	4e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-09
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-09
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-09
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	3e-09
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-04
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-08
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	5e-09
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	7e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-09
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-08
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	7e-09
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	7e-09
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	1e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-08
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	1e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-08
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	5e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	7e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	7e-05
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	7e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-08
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-08
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-08
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	3e-07
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	2e-05
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	4e-07
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	4e-07
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	1e-05
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	1e-05
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-07
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	1e-04
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-07
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-07
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-06
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	6e-06
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	4e-05
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	1e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	1e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	2e-04
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	2e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	6e-04
1ej6_B	1275	Lambda1; icosahedral, non-equivalence, dsRNA virus	6e-04

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  153 bits (389), Expect = 5e-48
 Identities = 48/154 (31%), Positives = 64/154 (41%), Gaps = 24/154 (15%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
            HL  H+G +P+ C  E CEK F++ +    H  THTGEK + C  + C   F T  +++
Sbjct: 32  AHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMK 91

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KH                                I  Y C  E C KAF      K H  
Sbjct: 92  KHFNRFHN------------------------IKICVYVCHFENCGKAFKKHNQLKVHQF 127

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +HT + PY C HE C K F     L++H + H G
Sbjct: 128 SHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  143 bits (363), Expect = 4e-44
 Identities = 41/155 (26%), Positives = 62/155 (40%), Gaps = 28/155 (18%)

Query: 2   HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
              +    + Y C    C  A++  +  +AH+  HTGEKP+ C  E C K F +   L +
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 62  HVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT 121
           H  THTG+                          + + C  + C+  F+T+ + K H   
Sbjct: 63  HSLTHTGE--------------------------KNFTCDSDGCDLRFTTKANMKKHFNR 96

Query: 122 HTGEK--PYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
               K   Y C  E C K+FK    L+ H  +HT 
Sbjct: 97  FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQ 131

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  126 bits (318), Expect = 3e-37
 Identities = 42/156 (26%), Positives = 59/156 (37%), Gaps = 31/156 (19%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK--PYRCAHEFCSKSFKTSGD 58
            H   H+G + + C  + C+  F+T+ + K H       K   Y C  E C K+FK    
Sbjct: 62  RHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQ 121

Query: 59  LQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAH 118
           L+ H  +HT +                           PY+CP E C+K FS     K H
Sbjct: 122 LKVHQFSHTQQ--------------------------LPYECPHEGCDKRFSLPSRLKRH 155

Query: 119 IRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHT 153
            + H G    +   + CS   KT     KHV   H 
Sbjct: 156 EKVHAGYPCKKD--DSCSFVGKTWTLYLKHVAECHQ 189

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  120 bits (302), Expect = 5e-35
 Identities = 30/124 (24%), Positives = 46/124 (37%), Gaps = 26/124 (20%)

Query: 31  AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLR 90
                    K Y C+   C  ++  +  LQ H+  HTG+                     
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGE--------------------- 40

Query: 91  IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVR 150
                +P+ C  E CEK F++ +    H  THTGEK + C  + C   F T  +++KH  
Sbjct: 41  -----KPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFN 95

Query: 151 THTG 154
               
Sbjct: 96  RFHN 99

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  149 bits (378), Expect = 6e-47
 Identities = 52/155 (33%), Positives = 70/155 (45%), Gaps = 30/155 (19%)

Query: 4   RIHSGIRPYKCP---VEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
            IH   + + C         + F  QY    H+R HTGEKP++C  E C KS+    +L+
Sbjct: 27  HIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLK 86

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI- 119
            H+R+HTG+                          +PY C  E C KAFS    R  H  
Sbjct: 87  THLRSHTGE--------------------------KPYMCEHEGCSKAFSNASDRAKHQN 120

Query: 120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           RTH+ EKPY C    C+K +     L+KHV+T  G
Sbjct: 121 RTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  133 bits (337), Expect = 1e-40
 Identities = 47/152 (30%), Positives = 65/152 (42%), Gaps = 35/152 (23%)

Query: 10  RPYKCPVEYCEKAFSTQYSRKAHI---RTHTGEKPYRCAHEFC---SKSFKTSGDLQKHV 63
              +   + C + F +Q     HI     H   K + C    C    + FK    L  H+
Sbjct: 2   TDCRW--DGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHM 59

Query: 64  RTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHT 123
           R HTG+                          +P+KC  E C K++S   + K H+R+HT
Sbjct: 60  RRHTGE--------------------------KPHKCTFEGCRKSYSRLENLKTHLRSHT 93

Query: 124 GEKPYRCAHEFCSKSFKTSGDLQKH-VRTHTG 154
           GEKPY C HE CSK+F  + D  KH  RTH+ 
Sbjct: 94  GEKPYMCEHEGCSKAFSNASDRAKHQNRTHSN 125

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  118 bits (297), Expect = 2e-34
 Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 25/124 (20%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           VH+R H+G +P+KC  E C K++S   + K H+R+HTGEKPY C HE CSK+F  + D  
Sbjct: 57  VHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRA 116

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           KH                           R HS  +PY C +  C K ++   S + H++
Sbjct: 117 KH-------------------------QNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVK 151

Query: 121 THTG 124
           T  G
Sbjct: 152 TVHG 155

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  104 bits (263), Expect = 2e-29
 Identities = 32/119 (26%), Positives = 47/119 (39%), Gaps = 28/119 (23%)

Query: 39  EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPY 98
           E   R     CS+ F +   L  H+ +                         IH   + +
Sbjct: 1   ETDCRWDG--CSQEFDSQEQLVHHINSE-----------------------HIHGERKEF 35

Query: 99  KCP---VEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
            C         + F  QY    H+R HTGEKP++C  E C KS+    +L+ H+R+HTG
Sbjct: 36  VCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG 94

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  143 bits (362), Expect = 2e-44
 Identities = 44/161 (27%), Positives = 61/161 (37%), Gaps = 35/161 (21%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEF-------CSKSF 53
               I           + C++ FST +    H+       P +  H           KSF
Sbjct: 15  SCKWIDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSF 72

Query: 54  KTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQY 113
           K    L  H+R HTG+                          +P+ CP   C K F+   
Sbjct: 73  KAKYKLVNHIRVHTGE--------------------------KPFPCPFPGCGKIFARSE 106

Query: 114 SRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           + K H RTHTGEKP++C  E C + F  S D +KH+  HT 
Sbjct: 107 NLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS 147

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  122 bits (309), Expect = 2e-36
 Identities = 38/137 (27%), Positives = 54/137 (39%), Gaps = 33/137 (24%)

Query: 1   VHLRIHSGIRPYKCPVEY-------CEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSF 53
            H+ +     P +              K+F  +Y    HIR HTGEKP+ C    C K F
Sbjct: 43  THVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIF 102

Query: 54  KTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQY 113
             S +L+ H RTHTG+                          +P+KC  E C++ F+   
Sbjct: 103 ARSENLKIHKRTHTGE--------------------------KPFKCEFEGCDRRFANSS 136

Query: 114 SRKAHIRTHTGEKPYRC 130
            RK H+  HT +K    
Sbjct: 137 DRKKHMHVHTSDKSGPS 153

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  139 bits (354), Expect = 1e-43
 Identities = 48/146 (32%), Positives = 65/146 (44%), Gaps = 28/146 (19%)

Query: 7   SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 66
           S  RP+ C    C K +      + H R HTGEKPY+C  + C + F  S  L++H R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

Query: 67  TGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
           TG                           +P++C  + C++ FS     K H RTHTGEK
Sbjct: 62  TGV--------------------------KPFQC--KTCQRKFSRSDHLKTHTRTHTGEK 93

Query: 127 PYRCAHEFCSKSFKTSGDLQKHVRTH 152
           P+ C    C K F  S +L +H   H
Sbjct: 94  PFSCRWPSCQKKFARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  115 bits (291), Expect = 3e-34
 Identities = 38/118 (32%), Positives = 55/118 (46%), Gaps = 28/118 (23%)

Query: 37  TGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIR 96
           + ++P+ CA+  C+K +     LQ H R HTG+                          +
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGE--------------------------K 35

Query: 97  PYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           PY+C  + CE+ FS     K H R HTG KP++C  + C + F  S  L+ H RTHTG
Sbjct: 36  PYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC--KTCQRKFSRSDHLKTHTRTHTG 91

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score =  106 bits (266), Expect = 2e-30
 Identities = 37/122 (30%), Positives = 53/122 (43%), Gaps = 28/122 (22%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           +H R H+G +PY+C  + CE+ FS     K H R HTG KP++C  + C + F  S  L+
Sbjct: 26  MHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQC--KTCQRKFSRSDHLK 83

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
            H RTHTG+                          +P+ C    C+K F+       H  
Sbjct: 84  THTRTHTGE--------------------------KPFSCRWPSCQKKFARSDELVRHHN 117

Query: 121 TH 122
            H
Sbjct: 118 MH 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  136 bits (344), Expect = 5e-42
 Identities = 44/145 (30%), Positives = 68/145 (46%), Gaps = 29/145 (20%)

Query: 10  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
           R   CP + C K F    + + H+ TH G + + CA   C K+F  S  L++H   HTG+
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTGE 60

Query: 70  YTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYR 129
                                     +P++C  E C K FS  ++ + H+R HTG++PY 
Sbjct: 61  --------------------------KPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYV 94

Query: 130 CAHEFCSKSFKTSGDLQKHVRTHTG 154
           C  + C+K F  S +L+ H+ TH  
Sbjct: 95  CPFDGCNKKFAQSTNLKSHILTHAK 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  117 bits (295), Expect = 1e-34
 Identities = 44/127 (34%), Positives = 53/127 (41%), Gaps = 29/127 (22%)

Query: 2   HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
           HL  H G R + C    C KAF      K H   HTGEKP++C  E C K F    +L+ 
Sbjct: 26  HLHTH-GPRVHVC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRT 82

Query: 62  HVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT 121
           HVR HTG                           RPY CP + C K F+   + K+HI T
Sbjct: 83  HVRIHTGD--------------------------RPYVCPFDGCNKKFAQSTNLKSHILT 116

Query: 122 HTGEKPY 128
           H   K  
Sbjct: 117 HAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score =  104 bits (262), Expect = 1e-29
 Identities = 36/116 (31%), Positives = 49/116 (42%), Gaps = 29/116 (25%)

Query: 39  EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPY 98
            +   C H+ C+K F+ +  ++KH+ TH                           G R +
Sbjct: 3   PRTIACPHKGCTKMFRDNSAMRKHLHTH---------------------------GPRVH 35

Query: 99  KCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
            C    C KAF      K H   HTGEKP++C  E C K F    +L+ HVR HTG
Sbjct: 36  VC--AECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTG 89

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 61.0 bits (149), Expect = 7e-13
 Identities = 19/42 (45%), Positives = 25/42 (59%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 42
            H+RIH+G RPY CP + C K F+   + K+HI TH   K  
Sbjct: 82  THVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN 123

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  123 bits (312), Expect = 2e-36
 Identities = 66/154 (42%), Positives = 79/154 (51%), Gaps = 34/154 (22%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
            H R H+G +PYKCP   C K+FS +     H RTHTGEKPY+C    C KSF    +L+
Sbjct: 39  EHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLR 94

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
            H RTHTG+                          +PY CP   C K+FS     +AH R
Sbjct: 95  AHQRTHTGE--------------------------KPYACPE--CGKSFSQLAHLRAHQR 126

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           THTGEKPY+C    C KSF    +L  H RTHTG
Sbjct: 127 THTGEKPYKCPE--CGKSFSREDNLHTHQRTHTG 158

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  122 bits (308), Expect = 8e-36
 Identities = 63/154 (40%), Positives = 75/154 (48%), Gaps = 34/154 (22%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
               +  G +PY CP   C K+FS       H RTHTGEKPY+C    C KSF    DL 
Sbjct: 11  AQAALEPGEKPYACPE--CGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLT 66

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
           +H RTHTG+                          +PYKC    C K+FS + + +AH R
Sbjct: 67  RHQRTHTGE--------------------------KPYKC--PECGKSFSQRANLRAHQR 98

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           THTGEKPY C    C KSF     L+ H RTHTG
Sbjct: 99  THTGEKPYACPE--CGKSFSQLAHLRAHQRTHTG 130

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  121 bits (306), Expect = 2e-35
 Identities = 66/154 (42%), Positives = 79/154 (51%), Gaps = 34/154 (22%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
            H R H+G +PYKC    C K+FS + + +AH RTHTGEKPY C    C KSF     L+
Sbjct: 67  RHQRTHTGEKPYKC--PECGKSFSQRANLRAHQRTHTGEKPYACPE--CGKSFSQLAHLR 122

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
            H RTHTG+                          +PYKCP   C K+FS + +   H R
Sbjct: 123 AHQRTHTGE--------------------------KPYKCPE--CGKSFSREDNLHTHQR 154

Query: 121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           THTGEKPY+C    C KSF     L  H RTHTG
Sbjct: 155 THTGEKPYKCPE--CGKSFSRRDALNVHQRTHTG 186

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  100 bits (251), Expect = 3e-27
 Identities = 51/133 (38%), Positives = 60/133 (45%), Gaps = 32/133 (24%)

Query: 22  AFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLI 81
           +     S  A      GEKPY C    C KSF  S  L +H RTHTG+            
Sbjct: 2   SEFGSSSSVAQAALEPGEKPYACPE--CGKSFSRSDHLAEHQRTHTGE------------ 47

Query: 82  VREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKT 141
                         +PYKCP   C K+FS +     H RTHTGEKPY+C    C KSF  
Sbjct: 48  --------------KPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQ 89

Query: 142 SGDLQKHVRTHTG 154
             +L+ H RTHTG
Sbjct: 90  RANLRAHQRTHTG 102

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 95.6 bits (239), Expect = 2e-25
 Identities = 50/127 (39%), Positives = 62/127 (48%), Gaps = 32/127 (25%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
            H R H+G +PY CP   C K+FS     +AH RTHTGEKPY+C    C KSF    +L 
Sbjct: 95  AHQRTHTGEKPYACPE--CGKSFSQLAHLRAHQRTHTGEKPYKCPE--CGKSFSREDNLH 150

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
            H RTHTG+                          +PYKC    C K+FS + +   H R
Sbjct: 151 THQRTHTGE--------------------------KPYKC--PECGKSFSRRDALNVHQR 182

Query: 121 THTGEKP 127
           THTG+K 
Sbjct: 183 THTGKKT 189

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score =  111 bits (281), Expect = 2e-32
 Identities = 43/150 (28%), Positives = 67/150 (44%), Gaps = 32/150 (21%)

Query: 6   HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT 65
            SG    +CP   C K F ++Y  K H R HTGEKP+ C    C K +    +L +H   
Sbjct: 2   SSGSSGVECPT--CHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEAR 57

Query: 66  HTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 125
           +                        ++   + + C V  C++ F  +   + H+ +HTGE
Sbjct: 58  NC-----------------------MNRSEQVFTCSV--CQETFRRRMELRLHMVSHTGE 92

Query: 126 KPYRCAHEFCSKSFKTSGDLQKH-VRTHTG 154
            PY+C+   CS+ F    DLQ H ++ H+G
Sbjct: 93  MPYKCSS--CSQQFMQKKDLQSHMIKLHSG 120

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 82.9 bits (206), Expect = 3e-21
 Identities = 30/130 (23%), Positives = 55/130 (42%), Gaps = 36/130 (27%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR---THTGEKPYRCAHEFCSKSFKTSG 57
           VH R H+G +P++CP   C K +  + +   H      +  E+ + C+   C ++F+   
Sbjct: 25  VHNRKHTGEKPFECP--KCGKCYFRKENLLEHEARNCMNRSEQVFTCSV--CQETFRRRM 80

Query: 58  DLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKA 117
           +L+ H+ +HTG+                           PYKC    C + F  +   ++
Sbjct: 81  ELRLHMVSHTGE--------------------------MPYKC--SSCSQQFMQKKDLQS 112

Query: 118 H-IRTHTGEK 126
           H I+ H+G  
Sbjct: 113 HMIKLHSGPS 122

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  106 bits (266), Expect = 1e-30
 Identities = 36/116 (31%), Positives = 52/116 (44%), Gaps = 30/116 (25%)

Query: 39  EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPY 98
           E+PY C  E C + F  SG L +H+R HTG+                          +P+
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQ--------------------------KPF 35

Query: 99  KCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +C    C + FS       HIRTHTGEKP+ C  + C + F  S + ++H + H  
Sbjct: 36  QC--RICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score =  102 bits (256), Expect = 4e-29
 Identities = 39/117 (33%), Positives = 55/117 (47%), Gaps = 30/117 (25%)

Query: 10  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
           RPY CPVE C++ FS   S   HIR HTG+KP++C    C ++F  S  L  H+RTHTG+
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGE 60

Query: 70  YTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
                                     +P+ C  + C + F+    RK H + H  +K
Sbjct: 61  --------------------------KPFAC--DICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 86.0 bits (214), Expect = 7e-23
 Identities = 26/67 (38%), Positives = 39/67 (58%), Gaps = 4/67 (5%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
          H+RIH+G +P++C    C + FS       HIRTHTGEKP+ C  + C + F  S + ++
Sbjct: 25 HIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKR 80

Query: 62 HVRTHTG 68
          H + H  
Sbjct: 81 HTKIHLR 87

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 50.2 bits (121), Expect = 5e-09
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 40
          H+R H+G +P+ C  + C + F+    RK H + H  +K
Sbjct: 53 HIRTHTGEKPFAC--DICGRKFARSDERKRHTKIHLRQK 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score =  100 bits (253), Expect = 1e-28
 Identities = 36/126 (28%), Positives = 49/126 (38%), Gaps = 32/126 (25%)

Query: 6   HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT 65
                P+KC  E C K FS +   K H+R HTG KPY+C    C  +   S  L KH+R 
Sbjct: 3   SGSSGPHKC--EVCGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRI 58

Query: 66  HTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 125
           H+ +                          RP+KC  + C  A         H+R+HTG+
Sbjct: 59  HSDE--------------------------RPFKC--QICPYASRNSSQLTVHLRSHTGD 90

Query: 126 KPYRCA 131
                 
Sbjct: 91  SGPSSG 96

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 97.9 bits (245), Expect = 2e-27
 Identities = 32/120 (26%), Positives = 51/120 (42%), Gaps = 32/120 (26%)

Query: 35  THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSG 94
           +     P++C    C K F     L+ H+R HTG                          
Sbjct: 2   SSGSSGPHKCEV--CGKCFSRKDKLKTHMRCHTGV------------------------- 34

Query: 95  IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
            +PYKC  + C+ A +   S   H+R H+ E+P++C  + C  + + S  L  H+R+HTG
Sbjct: 35  -KPYKC--KTCDYAAADSSSLNKHLRIHSDERPFKC--QICPYASRNSSQLTVHLRSHTG 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 78.6 bits (195), Expect = 7e-20
 Identities = 25/68 (36%), Positives = 42/68 (61%), Gaps = 4/68 (5%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           H+R H+G++PYKC  + C+ A +   S   H+R H+ E+P++C  + C  + + S  L 
Sbjct: 26 THMRCHTGVKPYKC--KTCDYAAADSSSLNKHLRIHSDERPFKC--QICPYASRNSSQLT 81

Query: 61 KHVRTHTG 68
           H+R+HTG
Sbjct: 82 VHLRSHTG 89

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 59.0 bits (144), Expect = 2e-12
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 45
           HLRIHS  RP+KC  + C  A         H+R+HTG+      
Sbjct: 54 KHLRIHSDERPFKC--QICPYASRNSSQLTVHLRSHTGDSGPSSG 96

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 99.4 bits (249), Expect = 8e-28
 Identities = 34/142 (23%), Positives = 49/142 (34%), Gaps = 37/142 (26%)

Query: 4   RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV 63
              SG + Y C    C K+F+ +  R  H+  H G +PY C    C K FK    L  H+
Sbjct: 3   SGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHM 57

Query: 64  RTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHT 123
           + HTG                          I+PY+C    C K F   +    H    +
Sbjct: 58  KIHTG--------------------------IKPYEC--NICAKRFM--WRDSFHRHVTS 87

Query: 124 GEKPYRCAHEFCSKSFKTSGDL 145
             K Y  A     ++   +   
Sbjct: 88  CTKSYEAAK--AEQNTTEASGP 107

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 87.9 bits (219), Expect = 2e-23
 Identities = 31/121 (25%), Positives = 41/121 (33%), Gaps = 35/121 (28%)

Query: 34  RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHS 93
              +G+K Y C    C KSF       +H+  H G                         
Sbjct: 3   SGSSGDKLYPCQ---CGKSFTHKSQRDRHMSMHLGL------------------------ 35

Query: 94  GIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT 153
             RPY C V  C K F  ++    H++ HTG KPY C    C+K F        H    +
Sbjct: 36  --RPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWRDSF--HRHVTS 87

Query: 154 G 154
            
Sbjct: 88  C 88

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 74.0 bits (183), Expect = 6e-18
 Identities = 26/110 (23%), Positives = 39/110 (35%), Gaps = 34/110 (30%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
            H+ +H G+RPY C V  C K F  ++    H++ HTG KPY C    C+K F       
Sbjct: 27  RHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTGIKPYECNI--CAKRFMWRDSF- 81

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFS 110
                                      H  + S  + Y+      E+  +
Sbjct: 82  ---------------------------HRHVTSCTKSYEA--AKAEQNTT 102

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 58.2 bits (142), Expect = 7e-12
 Identities = 15/59 (25%), Positives = 25/59 (42%), Gaps = 6/59 (10%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDL 59
            H++IH+GI+PY+C    C K F   +    H    +  K Y  A     ++   +   
Sbjct: 55  GHMKIHTGIKPYEC--NICAKRFM--WRDSFHRHVTSCTKSYEAAK--AEQNTTEASGP 107

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 98.7 bits (247), Expect = 1e-27
 Identities = 27/130 (20%), Positives = 44/130 (33%), Gaps = 32/130 (24%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
                    + + C  ++C + F+  Y+   H RTHT E+PY C    C K+F+    L+
Sbjct: 7   GGRLPSKTKKEFIC--KFCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLR 62

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR 120
            H   H+ +                          +P+KC  + C K F    +   H  
Sbjct: 63  DHRYIHSKE--------------------------KPFKC--QECGKGFCQSRTLAVHKT 94

Query: 121 THTGEKPYRC 130
            H        
Sbjct: 95  LHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 95.6 bits (239), Expect = 2e-26
 Identities = 34/123 (27%), Positives = 45/123 (36%), Gaps = 32/123 (26%)

Query: 32  HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRI 91
                  +K + C  +FC + F  S +L  H RTHT +                      
Sbjct: 8   GRLPSKTKKEFIC--KFCGRHFTKSYNLLIHERTHTDE---------------------- 43

Query: 92  HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT 151
               RPY C  + C KAF  Q   + H   H+ EKP++C    C K F  S  L  H   
Sbjct: 44  ----RPYTC--DICHKAFRRQDHLRDHRYIHSKEKPFKCQE--CGKGFCQSRTLAVHKTL 95

Query: 152 HTG 154
           H  
Sbjct: 96  HMQ 98

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 74.4 bits (184), Expect = 4e-18
 Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 4/68 (5%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 146
                    + + C  ++C + F+  Y+   H RTHT E+PY C    C K+F+    L+
Sbjct: 7   GGRLPSKTKKEFIC--KFCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLR 62

Query: 147 KHVRTHTG 154
            H   H+ 
Sbjct: 63  DHRYIHSK 70

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 94.6 bits (236), Expect = 5e-26
 Identities = 35/132 (26%), Positives = 52/132 (39%), Gaps = 34/132 (25%)

Query: 22  AFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLI 81
           +  +        R H  + P       C+K +  S  L+ H+RTHTG+            
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG------CTKVYTKSSHLKAHLRTHTGE------------ 43

Query: 82  VREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKT 141
                         +PYKC  E C+  F+       H R HTG KP++C    C++SF  
Sbjct: 44  --------------KPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC--GVCNRSFSR 87

Query: 142 SGDLQKHVRTHT 153
           S  L  H++ H 
Sbjct: 88  SDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 93.8 bits (234), Expect = 9e-26
 Identities = 35/118 (29%), Positives = 49/118 (41%), Gaps = 28/118 (23%)

Query: 6   HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT 65
               R + C    C K ++     KAH+RTHTGEKPY+C  E C   F  S +L +H R 
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69

Query: 66  HTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHT 123
           HT                          G +P++C V  C ++FS       H++ H 
Sbjct: 70  HT--------------------------GAKPFQCGV--CNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 83.4 bits (207), Expect = 1e-21
 Identities = 27/66 (40%), Positives = 37/66 (56%), Gaps = 2/66 (3%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
          HLR H+G +PYKC  E C+  F+       H R HTG KP++C    C++SF  S  L  
Sbjct: 36 HLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQC--GVCNRSFSRSDHLAL 93

Query: 62 HVRTHT 67
          H++ H 
Sbjct: 94 HMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 82.3 bits (204), Expect = 3e-21
 Identities = 27/63 (42%), Positives = 34/63 (53%)

Query: 92  HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT 151
               R + C    C K ++     KAH+RTHTGEKPY+C  E C   F  S +L +H R 
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69

Query: 152 HTG 154
           HTG
Sbjct: 70  HTG 72

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 41.8 bits (99), Expect = 7e-06
 Identities = 13/47 (27%), Positives = 20/47 (42%), Gaps = 6/47 (12%)

Query: 108 AFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +  +        R H  + P       C+K +  S  L+ H+RTHTG
Sbjct: 2   SSGSSGPDLEKRRIHYCDYPG------CTKVYTKSSHLKAHLRTHTG 42

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 92.9 bits (232), Expect = 1e-25
 Identities = 27/121 (22%), Positives = 42/121 (34%), Gaps = 36/121 (29%)

Query: 9   IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
           ++P++C    C + FS       HIRTHTGEKP+ C    C + F  S + ++H      
Sbjct: 1   MKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI 56

Query: 69  KYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYS---RKAHIRTHTGE 125
                                       P     +  E+  S  Y      A ++   GE
Sbjct: 57  L---------------------------PILE--DKVEELLSKNYHLENEVARLKKLVGE 87

Query: 126 K 126
           +
Sbjct: 88  R 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 82.9 bits (206), Expect = 1e-21
 Identities = 24/118 (20%), Positives = 40/118 (33%), Gaps = 36/118 (30%)

Query: 40  KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYK 99
           KP++C    C ++F  S  L  H+RTHTG+                          +P+ 
Sbjct: 2   KPFQC--RICMRNFSRSDHLTTHIRTHTGE--------------------------KPFA 33

Query: 100 CPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV---RTHTG 154
           C  + C + F+    RK H        P     +   +    +  L+  V   +   G
Sbjct: 34  C--DICGRKFARSDERKRHRDIQH-ILPILE--DKVEELLSKNYHLENEVARLKKLVG 86

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 74.5 bits (184), Expect = 2e-18
 Identities = 20/61 (32%), Positives = 30/61 (49%), Gaps = 4/61 (6%)

Query: 95  IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           ++P++C    C + FS       HIRTHTGEKP+ C    C + F  S + ++H      
Sbjct: 1   MKPFQC--RICMRNFSRSDHLTTHIRTHTGEKPFACDI--CGRKFARSDERKRHRDIQHI 56

Query: 155 K 155
            
Sbjct: 57  L 57

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 71.4 bits (176), Expect = 3e-17
 Identities = 15/70 (21%), Positives = 27/70 (38%), Gaps = 8/70 (11%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
          H+R H+G +P+ C  + C + F+    RK H        P     +   +    +  L+ 
Sbjct: 22 HIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQH-ILPILE--DKVEELLSKNYHLEN 76

Query: 62 HV---RTHTG 68
           V   +   G
Sbjct: 77 EVARLKKLVG 86

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 87.6 bits (218), Expect = 1e-23
 Identities = 20/105 (19%), Positives = 33/105 (31%), Gaps = 29/105 (27%)

Query: 36  HTGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTGKYTPGPGIDSRLIVREDFVHLRIHSG 94
            +G     C    C + F     L  H +  H  +                         
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQ------------------------- 36

Query: 95  IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSF 139
            + + CP   C K+F+ +   K H++ H+  + Y C  EF   S 
Sbjct: 37  -KSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC--EFSGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 84.5 bits (210), Expect = 2e-22
 Identities = 20/105 (19%), Positives = 31/105 (29%), Gaps = 29/105 (27%)

Query: 6   HSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRCAHEFCSKSFKTSGDLQKHVR 64
            SG     C    C + FS +     H +  H  +K + C    C KSF     L++H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 65  THTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAF 109
            H+                            R Y C       + 
Sbjct: 62  LHSDT--------------------------RDYICEF--SGPSS 78

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 83.8 bits (208), Expect = 4e-22
 Identities = 17/64 (26%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 92  HSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRCAHEFCSKSFKTSGDLQKHVR 150
            SG     C    C + FS +     H +  H  +K + C    C KSF     L++H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 151 THTG 154
            H+ 
Sbjct: 62  LHSD 65

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 65.6 bits (161), Expect = 4e-15
 Identities = 15/54 (27%), Positives = 25/54 (46%), Gaps = 3/54 (5%)

Query: 1  VHLRI-HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSF 53
           H +  H   + + CP   C K+F+ +   K H++ H+  + Y C  EF   S 
Sbjct: 27 HHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC--EFSGPSS 78

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 84.9 bits (211), Expect = 1e-22
 Identities = 20/100 (20%), Positives = 34/100 (34%), Gaps = 29/100 (29%)

Query: 30  KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHL 89
            +  RTH+GEKPY C    C   F  SG ++ H+     +                    
Sbjct: 4   GSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHTE-------------------- 41

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT-HTGEKPY 128
                +  + C   +C+   + +     H+R  H+   P 
Sbjct: 42  ----NVAKFHC--PHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 78.3 bits (194), Expect = 5e-20
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 7/70 (10%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE--KPYRCAHEFCSKSFKTSGDL 59
            R HSG +PY+C    C   F+   + K HI     E    + C H  C        DL
Sbjct: 6  SGRTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDL 61

Query: 60 QKHVRT-HTG 68
            H+R  H+ 
Sbjct: 62 GVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 78.3 bits (194), Expect = 5e-20
 Identities = 21/70 (30%), Positives = 28/70 (40%), Gaps = 7/70 (10%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE--KPYRCAHEFCSKSFKTSGDL 145
             R HSG +PY+C    C   F+   + K HI     E    + C H  C        DL
Sbjct: 6   SGRTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDL 61

Query: 146 QKHVRT-HTG 154
             H+R  H+ 
Sbjct: 62  GVHLRKQHSY 71

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 61.0 bits (149), Expect = 3e-13
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
            +  RTH+GEKPY C    C   F  SG ++ H+     
Sbjct: 4   GSSGRTHSGEKPYECYI--CHARFTQSGTMKMHILQKHT 40

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 49.4 bits (119), Expect = 7e-09
 Identities = 7/45 (15%), Positives = 17/45 (37%), Gaps = 5/45 (11%)

Query: 1  VHLRIHSG--IRPYKCPVEYCEKAFSTQYSRKAHIRT-HTGEKPY 42
          +H+       +  + C   +C+   + +     H+R  H+   P 
Sbjct: 33 MHILQKHTENVAKFHC--PHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 85.2 bits (212), Expect = 1e-22
 Identities = 36/122 (29%), Positives = 44/122 (36%), Gaps = 31/122 (25%)

Query: 6   HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT 65
            SG     C  E C K F   Y    H  +H+GEKPY C    C   FK    +  HVR+
Sbjct: 2   SSGSSGVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSC--PVCGLRFKRKDRMSYHVRS 57

Query: 66  HTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTG 124
           H G                        S  +PY C  + C K FS       HI + H+G
Sbjct: 58  HDG------------------------SVGKPYIC--QSCGKGFSRPDHLNGHIKQVHSG 91

Query: 125 EK 126
             
Sbjct: 92  PS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 84.5 bits (210), Expect = 3e-22
 Identities = 32/122 (26%), Positives = 45/122 (36%), Gaps = 35/122 (28%)

Query: 36  HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGI 95
            +G     C  E C K F+    L +H  +H+G+                          
Sbjct: 2   SSGSSGVAC--EICGKIFRDVYHLNRHKLSHSGE-------------------------- 33

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE--KPYRCAHEFCSKSFKTSGDLQKHV-RTH 152
           +PY CPV  C   F  +     H+R+H G   KPY C    C K F     L  H+ + H
Sbjct: 34  KPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQS--CGKGFSRPDHLNGHIKQVH 89

Query: 153 TG 154
           +G
Sbjct: 90  SG 91

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 67.5 bits (166), Expect = 1e-15
 Identities = 26/71 (36%), Positives = 33/71 (46%), Gaps = 7/71 (9%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE--KPYRCAHEFCSKSFKTSGD 58
           H   HSG +PY CPV  C   F  +     H+R+H G   KPY C    C K F     
Sbjct: 25 RHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGSVGKPYICQS--CGKGFSRPDH 80

Query: 59 LQKHV-RTHTG 68
          L  H+ + H+G
Sbjct: 81 LNGHIKQVHSG 91

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 84.9 bits (211), Expect = 2e-22
 Identities = 30/117 (25%), Positives = 45/117 (38%), Gaps = 30/117 (25%)

Query: 36  HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGI 95
            T       A   C K++  S  L+ H+RTHTG+                          
Sbjct: 2   RTATHTCDYAG--CGKTYTKSSHLKAHLRTHTGE-------------------------- 33

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 152
           +PY C  + C   F+       H R HTG +P++C    C ++F  S  L  H++ H
Sbjct: 34  KPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 82.2 bits (204), Expect = 2e-21
 Identities = 33/117 (28%), Positives = 46/117 (39%), Gaps = 30/117 (25%)

Query: 6   HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT 65
            +           C K ++     KAH+RTHTGEKPY C  + C   F  S +L +H R 
Sbjct: 2   RTATHTCDYA--GCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59

Query: 66  HTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTH 122
           HT                          G RP++C    C++AFS       H++ H
Sbjct: 60  HT--------------------------GHRPFQCQK--CDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 76.8 bits (190), Expect = 3e-19
 Identities = 23/65 (35%), Positives = 34/65 (52%), Gaps = 2/65 (3%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
          HLR H+G +PY C  + C   F+       H R HTG +P++C    C ++F  S  L  
Sbjct: 26 HLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQK--CDRAFSRSDHLAL 83

Query: 62 HVRTH 66
          H++ H
Sbjct: 84 HMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 74.5 bits (184), Expect = 2e-18
 Identities = 24/63 (38%), Positives = 31/63 (49%), Gaps = 2/63 (3%)

Query: 92  HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT 151
            +           C K ++     KAH+RTHTGEKPY C  + C   F  S +L +H R 
Sbjct: 2   RTATHTCDYA--GCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRK 59

Query: 152 HTG 154
           HTG
Sbjct: 60  HTG 62

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 83.7 bits (208), Expect = 5e-22
 Identities = 23/108 (21%), Positives = 34/108 (31%), Gaps = 28/108 (25%)

Query: 32  HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRI 91
             RTHTGEKPY C+H  C K+F+    L  H + +                         
Sbjct: 6   SGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDP---------------------- 41

Query: 92  HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSF 139
           +     + C    C K F+ + +   H     G       +     S 
Sbjct: 42  NFVPAAFVCS--KCGKTFTRRNTMARHADNCAGPDGVEGEN--SGPSS 85

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 68.3 bits (168), Expect = 4e-16
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 8/72 (11%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE----KPYRCAHEFCSKSFKTS 56
             R H+G +PY C   +C+K F  +     H + +         + C+   C K+F   
Sbjct: 5  SSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRR 60

Query: 57 GDLQKHVRTHTG 68
            + +H     G
Sbjct: 61 NTMARHADNCAG 72

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 68.3 bits (168), Expect = 4e-16
 Identities = 16/72 (22%), Positives = 28/72 (38%), Gaps = 8/72 (11%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE----KPYRCAHEFCSKSFKTS 142
              R H+G +PY C   +C+K F  +     H + +         + C+   C K+F   
Sbjct: 5   SSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRR 60

Query: 143 GDLQKHVRTHTG 154
             + +H     G
Sbjct: 61  NTMARHADNCAG 72

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 54.5 bits (132), Expect = 1e-10
 Identities = 16/44 (36%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP 161
             RTHTGEKPY C+H  C K+F+    L  H + +         
Sbjct: 6   SGRTHTGEKPYACSH--CDKTFRQKQLLDMHFKRYHDPNFVPAA 47

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 53.3 bits (129), Expect = 3e-10
 Identities = 8/57 (14%), Positives = 16/57 (28%), Gaps = 8/57 (14%)

Query: 1  VHLRIHSG----IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSF 53
          +H + +         + C    C K F+ + +   H     G       +     S 
Sbjct: 33 MHFKRYHDPNFVPAAFVCS--KCGKTFTRRNTMARHADNCAGPDGVEGEN--SGPSS 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 80.4 bits (199), Expect = 1e-20
 Identities = 32/112 (28%), Positives = 41/112 (36%), Gaps = 29/112 (25%)

Query: 42  YRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCP 101
           Y C  E C K+FK    L+ H  +HT +                           PY+CP
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQ--------------------------LPYECP 35

Query: 102 VEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTH 152
            E C+K FS     K H + H G    +   + CS   KT     KHV   H
Sbjct: 36  HEGCDKRFSLPSRLKRHEKVHAGYPCKKD--DSCSFVGKTWTLYLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 78.4 bits (194), Expect = 5e-20
 Identities = 27/112 (24%), Positives = 35/112 (31%), Gaps = 29/112 (25%)

Query: 12  YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT 71
           Y C  E C KAF      K H  +HT + PY C HE C K F     L++H + H G   
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGY-- 59

Query: 72  PGPGIDSRLIVREDFVHLRIHSGIRPYKCPV-EYCEKAFSTQYSRKAHIRTH 122
                                      K     +  K ++     K     H
Sbjct: 60  ------------------------PCKKDDSCSFVGKTWTL--YLKHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 77.7 bits (192), Expect = 1e-19
 Identities = 23/57 (40%), Positives = 28/57 (49%)

Query: 98  YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           Y C  E C KAF      K H  +HT + PY C HE C K F     L++H + H G
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG 58

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 74.2 bits (183), Expect = 3e-18
 Identities = 24/67 (35%), Positives = 30/67 (44%), Gaps = 3/67 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
          VH   H+   PY+CP E C+K FS     K H + H G    +   + CS   KT     
Sbjct: 21 VHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKD--DSCSFVGKTWTLYL 78

Query: 61 KHV-RTH 66
          KHV   H
Sbjct: 79 KHVAECH 85

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 77.8 bits (192), Expect = 7e-20
 Identities = 26/65 (40%), Positives = 34/65 (52%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
               S IR + C    C K +      KAH RTHTGEKP+ C+ + C + F  S +L +
Sbjct: 8  PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67

Query: 62 HVRTH 66
          H RTH
Sbjct: 68 HRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 77.8 bits (192), Expect = 7e-20
 Identities = 26/65 (40%), Positives = 34/65 (52%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 147
                S IR + C    C K +      KAH RTHTGEKP+ C+ + C + F  S +L +
Sbjct: 8   PQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSR 67

Query: 148 HVRTH 152
           H RTH
Sbjct: 68  HRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 61.2 bits (149), Expect = 2e-13
 Identities = 21/95 (22%), Positives = 33/95 (34%), Gaps = 26/95 (27%)

Query: 28  SRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFV 87
                    +  + + C+H  C K++  S  L+ H RTHT                    
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHT-------------------- 43

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTH 122
                 G +P+ C  + CE+ F+       H RTH
Sbjct: 44  ------GEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 48.2 bits (115), Expect = 2e-08
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 114 SRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
                    +  + + C+H  C K++  S  L+ H RTHTG
Sbjct: 4   GSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTG 44

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 43.9 bits (104), Expect = 6e-07
 Identities = 13/36 (36%), Positives = 19/36 (52%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTH 36
           H R H+G +P+ C  + CE+ F+       H RTH
Sbjct: 37 AHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH 72

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 75.6 bits (187), Expect = 5e-19
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           H  +    +PYKC  + C+ +F  + +  +H   HTGEKPYRC    C   F    +L+
Sbjct: 7  HHSHMTHSDKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPANLK 62

Query: 61 KHVRTHTG 68
           H R H+G
Sbjct: 63 THTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 75.6 bits (187), Expect = 5e-19
 Identities = 24/68 (35%), Positives = 35/68 (51%), Gaps = 4/68 (5%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 146
            H  +    +PYKC  + C+ +F  + +  +H   HTGEKPYRC    C   F    +L+
Sbjct: 7   HHSHMTHSDKPYKC--DRCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPANLK 62

Query: 147 KHVRTHTG 154
            H R H+G
Sbjct: 63  THTRIHSG 70

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 75.6 bits (187), Expect = 6e-19
 Identities = 28/97 (28%), Positives = 38/97 (39%), Gaps = 30/97 (30%)

Query: 32  HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRI 91
           H      +KPY+C    C  SF+  G+L  H   HTG+                      
Sbjct: 8   HSHMTHSDKPYKCDR--CQASFRYKGNLASHKTVHTGE---------------------- 43

Query: 92  HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 128
               +PY+C    C   F+   + K H R H+GEKPY
Sbjct: 44  ----KPYRC--NICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 51.7 bits (125), Expect = 9e-10
 Identities = 17/42 (40%), Positives = 24/42 (57%), Gaps = 2/42 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 42
           H  +H+G +PY+C    C   F+   + K H R H+GEKPY
Sbjct: 35 SHKTVHTGEKPYRC--NICGAQFNRPANLKTHTRIHSGEKPY 74

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 75.5 bits (187), Expect = 6e-19
 Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 4/68 (5%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           HL IHS  RPY C  +YC K F  +   K H   HTGEKP++C    C K+F  S +L 
Sbjct: 19 THLLIHSDTRPYPC--QYCGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLI 74

Query: 61 KHVRTHTG 68
           H R HTG
Sbjct: 75 THSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 75.5 bits (187), Expect = 6e-19
 Identities = 32/68 (47%), Positives = 38/68 (55%), Gaps = 4/68 (5%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 146
            HL IHS  RPY C  +YC K F  +   K H   HTGEKP++C    C K+F  S +L 
Sbjct: 19  THLLIHSDTRPYPC--QYCGKRFHQKSDMKKHTFIHTGEKPHKCQV--CGKAFSQSSNLI 74

Query: 147 KHVRTHTG 154
            H R HTG
Sbjct: 75  THSRKHTG 82

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 74.5 bits (184), Expect = 1e-18
 Identities = 19/73 (26%), Positives = 33/73 (45%), Gaps = 4/73 (5%)

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV 149
              S   P KC    C  + S++ + + H R H  ++P++C +  CS   K   +L KH+
Sbjct: 2   SSGSSGHPEKC--SECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHM 57

Query: 150 RTHTGKYTAEVPG 162
           +   G  +    G
Sbjct: 58  KKFHGDMSGPSSG 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 74.1 bits (183), Expect = 2e-18
 Identities = 20/73 (27%), Positives = 33/73 (45%), Gaps = 5/73 (6%)

Query: 4  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV 63
             S   P KC    C  + S++ + + H R H  ++P++C +  CS   K   +L KH+
Sbjct: 2  SSGSSGHPEKC--SECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHM 57

Query: 64 RTHTG-KYTPGPG 75
          +   G    P  G
Sbjct: 58 KKFHGDMSGPSSG 70

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 69.8 bits (172), Expect = 8e-17
 Identities = 17/98 (17%), Positives = 29/98 (29%), Gaps = 30/98 (30%)

Query: 34  RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHS 93
            + +   P +C+   CS S  +   L+ H R H                           
Sbjct: 2   SSGSSGHPEKCSE--CSYSCSSKAALRIHERIHCTD------------------------ 35

Query: 94  GIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 131
             RP+KC   YC        +   H++   G+     +
Sbjct: 36  --RPFKC--NYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 50.6 bits (122), Expect = 2e-09
 Identities = 12/45 (26%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 45
          +H RIH   RP+KC   YC        +   H++   G+     +
Sbjct: 27 IHERIHCTDRPFKC--NYCSFDTKQPSNLSKHMKKFHGDMSGPSS 69

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 72.9 bits (180), Expect = 7e-18
 Identities = 28/67 (41%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
                  R YKC  + C K+FS       H RTHTGEKPY+C    C K+F     L  
Sbjct: 9  SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIG 64

Query: 62 HVRTHTG 68
          H R HTG
Sbjct: 65 HHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 72.9 bits (180), Expect = 7e-18
 Identities = 28/67 (41%), Positives = 32/67 (47%), Gaps = 4/67 (5%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 147
                   R YKC  + C K+FS       H RTHTGEKPY+C    C K+F     L  
Sbjct: 9   SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIG 64

Query: 148 HVRTHTG 154
           H R HTG
Sbjct: 65  HHRVHTG 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 72.1 bits (178), Expect = 1e-17
 Identities = 30/97 (30%), Positives = 36/97 (37%), Gaps = 30/97 (30%)

Query: 32  HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRI 91
                   + Y+C    C KSF  S DL KH RTHTG+                      
Sbjct: 9   SEWQQRERRRYKCDE--CGKSFSHSSDLSKHRRTHTGE---------------------- 44

Query: 92  HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 128
               +PYKC  + C KAF  +     H R HTG  P 
Sbjct: 45  ----KPYKC--DECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 50.1 bits (121), Expect = 3e-09
 Identities = 18/42 (42%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 42
           H R H+G +PYKC  + C KAF  +     H R HTG  P 
Sbjct: 36 KHRRTHTGEKPYKC--DECGKAFIQRSHLIGHHRVHTGSGPS 75

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 70.8 bits (174), Expect = 3e-17
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 4  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV 63
           +   +RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+
Sbjct: 12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHI 69

Query: 64 RTHT 67
          RTHT
Sbjct: 70 RTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 70.8 bits (174), Expect = 3e-17
 Identities = 28/64 (43%), Positives = 38/64 (59%), Gaps = 2/64 (3%)

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV 149
            +   +RPY CPVE C++ FS       HIR HTG+KP++C    C ++F  S  L  H+
Sbjct: 12  YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHI 69

Query: 150 RTHT 153
           RTHT
Sbjct: 70  RTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 63.5 bits (155), Expect = 2e-14
 Identities = 24/95 (25%), Positives = 36/95 (37%), Gaps = 30/95 (31%)

Query: 29  RKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVH 88
              ++      +PY C  E C + F  S +L +H+R HT                     
Sbjct: 9   LLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHT--------------------- 45

Query: 89  LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHT 123
                G +P++C +  C + FS       HIRTHT
Sbjct: 46  -----GQKPFQCRI--CMRNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 52.7 bits (127), Expect = 4e-10
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 2/40 (5%)

Query: 115 RKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              ++      +PY C  E C + F  S +L +H+R HTG
Sbjct: 9   LLNYVVPK--MRPYACPVESCDRRFSRSDELTRHIRIHTG 46

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 70.2 bits (173), Expect = 7e-17
 Identities = 30/67 (44%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
             IHSG +PY C    C KAFS       H R HTGEKPY+C    C K+F  +  L  
Sbjct: 5  SSGIHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLIN 60

Query: 62 HVRTHTG 68
          H R HT 
Sbjct: 61 HQRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 70.2 bits (173), Expect = 7e-17
 Identities = 30/67 (44%), Positives = 34/67 (50%), Gaps = 4/67 (5%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 147
              IHSG +PY C    C KAFS       H R HTGEKPY+C    C K+F  +  L  
Sbjct: 5   SSGIHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLIN 60

Query: 148 HVRTHTG 154
           H R HT 
Sbjct: 61  HQRIHTS 67

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 68.3 bits (168), Expect = 4e-16
 Identities = 30/97 (30%), Positives = 35/97 (36%), Gaps = 30/97 (30%)

Query: 32  HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRI 91
               H+GEKPY C    C K+F  S  L +H R HTG+                      
Sbjct: 5   SSGIHSGEKPYGCVE--CGKAFSRSSILVQHQRVHTGE---------------------- 40

Query: 92  HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 128
               +PYKC    C KAFS       H R HT     
Sbjct: 41  ----KPYKC--LECGKAFSQNSGLINHQRIHTSGPSS 71

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 17/41 (41%), Positives = 20/41 (48%), Gaps = 2/41 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 42
          H R+H+G +PYKC    C KAFS       H R HT     
Sbjct: 33 HQRVHTGEKPYKC--LECGKAFSQNSGLINHQRIHTSGPSS 71

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 69.1 bits (170), Expect = 2e-16
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 6/67 (8%)

Query: 4  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT--HTGEKPYRCAHEFCSKSFKTSGDLQK 61
              G   Y+C  + C + ++   +   H  T      K Y C   FC K F    ++  
Sbjct: 3  FTKEGEHTYRC--KVCSRVYTHISNFCRHYVTSHKRNVKVYPC--PFCFKEFTRKDNMTA 58

Query: 62 HVRTHTG 68
          HV+    
Sbjct: 59 HVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 69.1 bits (170), Expect = 2e-16
 Identities = 15/67 (22%), Positives = 24/67 (35%), Gaps = 6/67 (8%)

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT--HTGEKPYRCAHEFCSKSFKTSGDLQK 147
               G   Y+C  + C + ++   +   H  T      K Y C   FC K F    ++  
Sbjct: 3   FTKEGEHTYRC--KVCSRVYTHISNFCRHYVTSHKRNVKVYPC--PFCFKEFTRKDNMTA 58

Query: 148 HVRTHTG 154
           HV+    
Sbjct: 59  HVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 69.1 bits (170), Expect = 2e-16
 Identities = 18/91 (19%), Positives = 30/91 (32%), Gaps = 28/91 (30%)

Query: 34  RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHS 93
            T  GE  YRC  + CS+ +    +  +H  T                            
Sbjct: 3   FTKEGEHTYRC--KVCSRVYTHISNFCRHYVTSH------------------------KR 36

Query: 94  GIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG 124
            ++ Y CP   C K F+ + +  AH++    
Sbjct: 37  NVKVYPCPF--CFKEFTRKDNMTAHVKIIHK 65

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 9/39 (23%), Positives = 16/39 (41%), Gaps = 4/39 (10%)

Query: 2  HLRI--HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG 38
          H        ++ Y CP   C K F+ + +  AH++    
Sbjct: 29 HYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK 65

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 68.2 bits (167), Expect = 5e-16
 Identities = 17/72 (23%), Positives = 22/72 (30%), Gaps = 7/72 (9%)

Query: 6  HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHT---GEKPYRCAHEFCSKSFKTSGDLQKH 62
           SG    +C  E C      + S   H R H        + C  EFC K F+    +  H
Sbjct: 2  SSGSSGLQC--EICGFTCRQKASLNWHQRKHAETVAALRFPC--EFCGKRFEKPDSVAAH 57

Query: 63 VRTHTGKYTPGP 74
                     P
Sbjct: 58 RSKSHPALLLAP 69

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 65.1 bits (159), Expect = 8e-15
 Identities = 16/67 (23%), Positives = 21/67 (31%), Gaps = 7/67 (10%)

Query: 92  HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHT---GEKPYRCAHEFCSKSFKTSGDLQKH 148
            SG    +C  E C      + S   H R H        + C  EFC K F+    +  H
Sbjct: 2   SSGSSGLQC--EICGFTCRQKASLNWHQRKHAETVAALRFPC--EFCGKRFEKPDSVAAH 57

Query: 149 VRTHTGK 155
                  
Sbjct: 58  RSKSHPA 64

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 63.6 bits (155), Expect = 3e-14
 Identities = 16/95 (16%), Positives = 22/95 (23%), Gaps = 27/95 (28%)

Query: 36  HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGI 95
            +G    +C  E C  + +    L  H R H                             
Sbjct: 2   SSGSSGLQC--EICGFTCRQKASLNWHQRKHAET-----------------------VAA 36

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
             + C  E+C K F    S  AH            
Sbjct: 37  LRFPC--EFCGKRFEKPDSVAAHRSKSHPALLLAP 69

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 60.0 bits (146), Expect = 4e-13
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKP+ C    C   F  S +L +H R+H+G
Sbjct: 2  SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG 39

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 60.0 bits (146), Expect = 4e-13
 Identities = 14/38 (36%), Positives = 21/38 (55%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKP+ C    C   F  S +L +H R+H+G
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSG 39

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 56.9 bits (138), Expect = 4e-12
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 45
               +G +P+ C    C   FS       H R+H+G KP   +
Sbjct: 3  SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 56.9 bits (138), Expect = 4e-12
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 131
                +G +P+ C    C   FS       H R+H+G KP   +
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 59.8 bits (146), Expect = 5e-13
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHTG 68
          R + C V  C +AF+ Q   K H R+HT EKPY C    C+++F     L +H  + H+G
Sbjct: 1  RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPC--GLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 59.8 bits (146), Expect = 5e-13
 Identities = 23/60 (38%), Positives = 33/60 (55%), Gaps = 5/60 (8%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHTG 154
           R + C V  C +AF+ Q   K H R+HT EKPY C    C+++F     L +H  + H+G
Sbjct: 1   RSFVCEV--CTRAFARQEHLKRHYRSHTNEKPYPC--GLCNRAFTRRDLLIRHAQKIHSG 56

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 18/88 (20%), Positives = 34/88 (38%), Gaps = 31/88 (35%)

Query: 40  KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYK 99
           + + C  E C+++F     L++H R+HT +                          +PY 
Sbjct: 1   RSFVC--EVCTRAFARQEHLKRHYRSHTNE--------------------------KPYP 32

Query: 100 CPVEYCEKAFSTQYSRKAHI-RTHTGEK 126
           C +  C +AF+ +     H  + H+G  
Sbjct: 33  CGL--CNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 41.3 bits (98), Expect = 5e-06
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 3/40 (7%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEK 40
          H R H+  +PY C +  C +AF+ +     H  + H+G  
Sbjct: 21 HYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGNL 58

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 56.4 bits (137), Expect = 6e-12
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
              +  GEKPY C  E C   F+    L+ H+R HTG
Sbjct: 1  GSSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIHTG 36

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 56.4 bits (137), Expect = 6e-12
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
               +  GEKPY C  E C   F+    L+ H+R HTG
Sbjct: 1   GSSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIHTG 36

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 42
                G +PY C  E C   F    + K+H+R HTG  P 
Sbjct: 2  SSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 14/41 (34%), Positives = 18/41 (43%), Gaps = 2/41 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 128
                 G +PY C  E C   F    + K+H+R HTG  P 
Sbjct: 2   SSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 1e-11
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
                +G +PY+C    C KAFS + S   H R H+G+KP   + 
Sbjct: 2  SSGSSGTGEKPYEC--SVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 56.0 bits (136), Expect = 1e-11
 Identities = 16/46 (34%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                 +G +PY+C    C KAFS + S   H R H+G+KP   + 
Sbjct: 2   SSGSSGTGEKPYEC--SVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 7e-09
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKPY C+   C K+F     L  H R H+G
Sbjct: 3  SGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSG 37

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 7e-09
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKPY C+   C K+F     L  H R H+G
Sbjct: 3   SGSSGTGEKPYECSV--CGKAFSHRQSLSVHQRIHSG 37

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 1e-11
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
                +G  PY+C    C KAFS +Y   +H RTH GEKP   + 
Sbjct: 2  SSGSSGTGENPYEC--HECGKAFSRKYQLISHQRTHAGEKPSGPSS 45

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 1e-11
 Identities = 18/46 (39%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                 +G  PY+C    C KAFS +Y   +H RTH GEKP   + 
Sbjct: 2   SSGSSGTGENPYEC--HECGKAFSRKYQLISHQRTHAGEKPSGPSS 45

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGE PY C    C K+F     L  H RTH G
Sbjct: 3  SGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAG 37

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGE PY C    C K+F     L  H RTH G
Sbjct: 3   SGSSGTGENPYECHE--CGKAFSRKYQLISHQRTHAG 37

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-11
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
                +G +PY+C  + C KAFS   S   H R H+GEKP   + 
Sbjct: 2  SSGSSGTGEKPYEC--DVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 2e-11
 Identities = 17/46 (36%), Positives = 23/46 (50%), Gaps = 2/46 (4%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                 +G +PY+C  + C KAFS   S   H R H+GEKP   + 
Sbjct: 2   SSGSSGTGEKPYEC--DVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 8e-09
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKPY C    C K+F     L +H R H+G
Sbjct: 3  SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSG 37

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 8e-09
 Identities = 15/37 (40%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKPY C    C K+F     L +H R H+G
Sbjct: 3   SGSSGTGEKPYECDV--CRKAFSHHASLTQHQRVHSG 37

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 4e-11
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
                 G + YKC  + C K FS     + H R HTGEKP   
Sbjct: 2  SSGSSGMGEKCYKC--DVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 4e-11
 Identities = 16/44 (36%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                  G + YKC  + C K FS     + H R HTGEKP   
Sbjct: 2   SSGSSGMGEKCYKC--DVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 7e-09
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             +  GEK Y+C    C K F  S  LQ H R HTG
Sbjct: 3  SGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTG 37

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 7e-09
 Identities = 16/37 (43%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              +  GEK Y+C    C K F  S  LQ H R HTG
Sbjct: 3   SGSSGMGEKCYKCDV--CGKEFSQSSHLQTHQRVHTG 37

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 4e-11
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PYKC  E C K ++++++   H + HTGE+P   
Sbjct: 3  SGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 4e-11
 Identities = 14/43 (32%), Positives = 24/43 (55%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PYKC  E C K ++++++   H + HTGE+P   
Sbjct: 3   SGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY+C    C K + +  +L  H + HTG
Sbjct: 2  SSGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTG 37

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY+C    C K + +  +L  H + HTG
Sbjct: 2   SSGSSGTGEKPYKCEK--CGKGYNSKFNLDMHQKVHTG 37

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.0 bits (131), Expect = 5e-11
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
                +G +PY+C    C+KAF+T+ +   H RTHTGE     
Sbjct: 2  SSGSSGTGEKPYEC--NECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 54.0 bits (131), Expect = 5e-11
 Identities = 16/44 (36%), Positives = 23/44 (52%), Gaps = 2/44 (4%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                 +G +PY+C    C+KAF+T+ +   H RTHTGE     
Sbjct: 2   SSGSSGTGEKPYEC--NECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY C    C K+F T  +L  H RTHTG
Sbjct: 2  SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTG 37

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 18/38 (47%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY C    C K+F T  +L  H RTHTG
Sbjct: 2   SSGSSGTGEKPYECNE--CQKAFNTKSNLMVHQRTHTG 37

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.1 bits (131), Expect = 5e-11
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             +  GEKPY+C  E C   F     L+ HV  HTG
Sbjct: 2  SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTG 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 54.1 bits (131), Expect = 5e-11
 Identities = 15/37 (40%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              +  GEKPY+C  E C   F     L+ HV  HTG
Sbjct: 2   SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTG 36

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.0 bits (123), Expect = 8e-10
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 42
                G +PYKC  E C   F      +AH+  HTG  P 
Sbjct: 2  SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.0 bits (123), Expect = 8e-10
 Identities = 14/41 (34%), Positives = 17/41 (41%), Gaps = 2/41 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 128
                 G +PYKC  E C   F      +AH+  HTG  P 
Sbjct: 2   SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 5e-11
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKP++C    C  +F  S  L KH+R+H  
Sbjct: 2  SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHER 37

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 5e-11
 Identities = 14/38 (36%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKP++C    C  +F  S  L KH+R+H  
Sbjct: 2   SSGSSGTGEKPFQCKE--CGMNFSWSCSLFKHLRSHER 37

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 4e-10
 Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +P++C  + C   FS   S   H+R+H    P   + 
Sbjct: 3  SGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 4e-10
 Identities = 11/45 (24%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +P++C  + C   FS   S   H+R+H    P   + 
Sbjct: 3   SGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 6e-11
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
                SG +PY C    C K FS +    AH RTHTGEKP   
Sbjct: 2  SSGSSGSGEKPYGC--NECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 6e-11
 Identities = 19/44 (43%), Positives = 21/44 (47%), Gaps = 2/44 (4%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                 SG +PY C    C K FS +    AH RTHTGEKP   
Sbjct: 2   SSGSSGSGEKPYGC--NECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 3e-09
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + +GEKPY C    C K+F     L  H RTHTG
Sbjct: 2  SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTG 37

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 3e-09
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + +GEKPY C    C K+F     L  H RTHTG
Sbjct: 2   SSGSSGSGEKPYGCNE--CGKTFSQKSILSAHQRTHTG 37

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 6e-11
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
                +G +PY+C    C K+F+ +     H + HTGEKP   + 
Sbjct: 2  SSGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 6e-11
 Identities = 14/46 (30%), Positives = 22/46 (47%), Gaps = 2/46 (4%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                 +G +PY+C    C K+F+ +     H + HTGEKP   + 
Sbjct: 2   SSGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 5e-09
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKPY C+   C KSF     L  H + HTG
Sbjct: 3  SGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTG 37

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 5e-09
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKPY C+   C KSF     L  H + HTG
Sbjct: 3   SGSSGTGEKPYECSI--CGKSFTKKSQLHVHQQIHTG 37

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 6e-11
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PY+C    C KAFS + S   H   HTG+KP   + 
Sbjct: 3  SGSSGTGEKPYEC--NQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 6e-11
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PY+C    C KAFS + S   H   HTG+KP   + 
Sbjct: 3   SGSSGTGEKPYEC--NQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKPY C    C K+F     L  H   HTG
Sbjct: 3  SGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTG 37

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 15/37 (40%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKPY C    C K+F     L  H   HTG
Sbjct: 3   SGSSGTGEKPYECNQ--CGKAFSVRSSLTTHQAIHTG 37

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 7e-11
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               S  +PYKC  E C K ++ + +   H R H GEK    
Sbjct: 3  SGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 7e-11
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                S  +PYKC  E C K ++ + +   H R H GEK    
Sbjct: 3   SGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + + EKPY+C    C K +    +L  H R H G
Sbjct: 2  SSGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMG 37

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 12/38 (31%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + + EKPY+C    C K +    +L  H R H G
Sbjct: 2   SSGSSGSVEKPYKCED--CGKGYNRRLNLDMHQRVHMG 37

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 7e-11
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
                +G +PYKC    C K F+       H   HTGEKP   + 
Sbjct: 2  SSGSSGTGKKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 7e-11
 Identities = 15/46 (32%), Positives = 19/46 (41%), Gaps = 2/46 (4%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                 +G +PYKC    C K F+       H   HTGEKP   + 
Sbjct: 2   SSGSSGTGKKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 4e-08
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TG+KPY+C    C K F  +  L +H   HTG
Sbjct: 2  SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTG 37

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 4e-08
 Identities = 14/38 (36%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TG+KPY+C    C K F  +  L +H   HTG
Sbjct: 2   SSGSSGTGKKPYKCNE--CGKVFTQNSHLARHRGIHTG 37

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 53.7 bits (130), Expect = 7e-11
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +P+KC    C K FS + +   H + HTGEKP   + 
Sbjct: 3  SGSSGTGEKPFKC--VECGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 53.7 bits (130), Expect = 7e-11
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +P+KC    C K FS + +   H + HTGEKP   + 
Sbjct: 3   SGSSGTGEKPFKC--VECGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKP++C    C K F     L  H + HTG
Sbjct: 2  SSGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTG 37

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKP++C    C K F     L  H + HTG
Sbjct: 2   SSGSSGTGEKPFKCVE--CGKGFSRRSALNVHHKLHTG 37

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 8e-11
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G++PY C    C KAFS   S   H   HTGEKP   + 
Sbjct: 3  SGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 8e-11
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G++PY C    C KAFS   S   H   HTGEKP   + 
Sbjct: 3   SGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TG KPY C    C K+F     L  H   HTG
Sbjct: 2  SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTG 37

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 14/38 (36%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TG KPY C    C K+F     L  H   HTG
Sbjct: 2   SSGSSGTGVKPYMCNE--CGKAFSVYSSLTTHQVIHTG 37

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 8e-11
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PY+C    C KAFS       H R HTGEKP   + 
Sbjct: 3  SGSSGTGGKPYQC--NECGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 8e-11
 Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PY+C    C KAFS       H R HTGEKP   + 
Sbjct: 3   SGSSGTGGKPYQC--NECGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TG KPY+C    C K+F  +  L +H R HTG
Sbjct: 2  SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTG 37

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TG KPY+C    C K+F  +  L +H R HTG
Sbjct: 2   SSGSSGTGGKPYQCNE--CGKAFSQTSKLARHQRVHTG 37

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 8e-11
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G + +KC    C+K F+   S   H R HTGEKP   
Sbjct: 3  SGSSGAGKKLFKC--NECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 8e-11
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G + +KC    C+K F+   S   H R HTGEKP   
Sbjct: 3   SGSSGAGKKLFKC--NECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   +  G+K ++C    C K+F  S  L  H R HTG
Sbjct: 2  SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTG 37

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   +  G+K ++C    C K+F  S  L  H R HTG
Sbjct: 2   SSGSSGAGKKLFKCNE--CKKTFTQSSSLTVHQRIHTG 37

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 9e-11
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G RPY+C    C KAF T+ S   H R+HTGEKP   
Sbjct: 3  SGSSGTGQRPYEC--IECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 9e-11
 Identities = 19/43 (44%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G RPY+C    C KAF T+ S   H R+HTGEKP   
Sbjct: 3   SGSSGTGQRPYEC--IECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TG++PY C    C K+FKT   L  H R+HTG
Sbjct: 3  SGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTG 37

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TG++PY C    C K+FKT   L  H R+HTG
Sbjct: 3   SGSSGTGQRPYECIE--CGKAFKTKSSLICHRRSHTG 37

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 9e-11
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PYKC  + C K+F    S   H R HTGEKP   
Sbjct: 3  SGSSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 9e-11
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PYKC  + C K+F    S   H R HTGEKP   
Sbjct: 3   SGSSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY+C  + C KSF+    L  H R HTG
Sbjct: 2  SSGSSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIHTG 37

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY+C  + C KSF+    L  H R HTG
Sbjct: 2   SSGSSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIHTG 37

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 55.5 bits (133), Expect = 9e-11
 Identities = 24/125 (19%), Positives = 39/125 (31%), Gaps = 27/125 (21%)

Query: 24  STQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVR 83
           S+  S K +    TG   +RC  + CS ++ T  +L  H+   TG Y             
Sbjct: 2   SSGSSGKLYGSIFTGASKFRC--KDCSAAYDTLVELTVHMN-ETGHYR------------ 46

Query: 84  EDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSG 143
                                   +   + S          +K  +C   +C  SF++  
Sbjct: 47  --------DDNHETDNN--NPKRWSKPRKRSLLEMEGKEDAQKVLKC--MYCGHSFESLQ 94

Query: 144 DLQKH 148
           DL  H
Sbjct: 95  DLSVH 99

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 42.1 bits (98), Expect = 8e-06
 Identities = 18/133 (13%), Positives = 37/133 (27%), Gaps = 29/133 (21%)

Query: 1   VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQ 60
           ++  I +G   ++C  + C  A+ T      H+   TG           +   + S   +
Sbjct: 9   LYGSIFTGASKFRC--KDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRK 65

Query: 61  KHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI- 119
           + +    GK                          +  KC    C  +F +      H+ 
Sbjct: 66  RSLLEMEGK----------------------EDAQKVLKCMY--CGHSFESLQDLSVHMI 101

Query: 120 -RTHTGEKPYRCA 131
              H  +     +
Sbjct: 102 KTKHYQKVSGPSS 114

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 9e-11
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PY+C    C KAF+ + +   H + HTGEKP   + 
Sbjct: 3  SGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 9e-11
 Identities = 15/45 (33%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PY+C    C KAF+ + +   H + HTGEKP   + 
Sbjct: 3   SGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPYRCA   C K+F    +L  H + HTG
Sbjct: 2  SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTG 37

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPYRCA   C K+F    +L  H + HTG
Sbjct: 2   SSGSSGTGEKPYRCAE--CGKAFTDRSNLFTHQKIHTG 37

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PYKC    C KAFS       H R HTGEKP   + 
Sbjct: 3  SGSSGTGEKPYKC--NECGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PYKC    C KAFS       H R HTGEKP   + 
Sbjct: 3   SGSSGTGEKPYKC--NECGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKPY+C    C K+F  +  L +H R HTG
Sbjct: 3  SGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTG 37

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKPY+C    C K+F  +  L +H R HTG
Sbjct: 3   SGSSGTGEKPYKCNE--CGKAFSQTSKLARHQRIHTG 37

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +P++C    C K+FS       H R HTGE P   + 
Sbjct: 3  SGSSGTGEKPHEC--RECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +P++C    C K+FS       H R HTGE P   + 
Sbjct: 3   SGSSGTGEKPHEC--RECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKP+ C    C KSF  +  L  H R HTG
Sbjct: 3  SGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTG 37

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKP+ C    C KSF  +  L  H R HTG
Sbjct: 3   SGSSGTGEKPHECRE--CGKSFSFNSQLIVHQRIHTG 37

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PY C    C KAFS++     H+RTH+GEKP   
Sbjct: 3  SGSSGAGEKPYGC--SECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 17/43 (39%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PY C    C KAFS++     H+RTH+GEKP   
Sbjct: 3   SGSSGAGEKPYGC--SECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 8e-09
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   +  GEKPY C+   C K+F +   L  H+RTH+G
Sbjct: 2  SSGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSG 37

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 8e-09
 Identities = 15/38 (39%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   +  GEKPY C+   C K+F +   L  H+RTH+G
Sbjct: 2   SSGSSGAGEKPYGCSE--CGKAFSSKSYLIIHMRTHSG 37

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PY+C    C KAF+ + +   H R HTGEKP   + 
Sbjct: 3  SGSSGTGEKPYRC--GECGKAFAQKANLTQHQRIHTGEKPSGPSS 45

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 16/45 (35%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PY+C    C KAF+ + +   H R HTGEKP   + 
Sbjct: 3   SGSSGTGEKPYRC--GECGKAFAQKANLTQHQRIHTGEKPSGPSS 45

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPYRC    C K+F    +L +H R HTG
Sbjct: 2  SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTG 37

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPYRC    C K+F    +L +H R HTG
Sbjct: 2   SSGSSGTGEKPYRCGE--CGKAFAQKANLTQHQRIHTG 37

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G + YKC    C K FS       H + HTGEKP   + 
Sbjct: 3  SGSSGTGEKRYKC--NECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G + YKC    C K FS       H + HTGEKP   + 
Sbjct: 3   SGSSGTGEKRYKC--NECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEK Y+C    C K F  +  L +H + HTG
Sbjct: 3   SGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTG 37

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 15/69 (21%), Positives = 22/69 (31%), Gaps = 28/69 (40%)

Query: 32  HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRI 91
              + TGEK Y+C    C K F  +  L +H + HTG+                      
Sbjct: 3   SGSSGTGEKRYKCNE--CGKVFSRNSQLSQHQKIHTGE---------------------- 38

Query: 92  HSGIRPYKC 100
               +P   
Sbjct: 39  ----KPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.0 bits (128), Expect = 1e-10
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PYKC    C KAF    S   H R HTG++P   + 
Sbjct: 3  SGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.0 bits (128), Expect = 1e-10
 Identities = 16/45 (35%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PYKC    C KAF    S   H R HTG++P   + 
Sbjct: 3   SGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.6 bits (114), Expect = 2e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY+C    C K+F  +    +H R HTG
Sbjct: 2  SSGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTG 37

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.6 bits (114), Expect = 2e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY+C    C K+F  +    +H R HTG
Sbjct: 2   SSGSSGTGEKPYKCME--CGKAFGDNSSCTQHQRLHTG 37

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
                +G +P+KC +  C K+F  +     H   HT EKP   
Sbjct: 2  SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 2/44 (4%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                 +G +P+KC +  C K+F  +     H   HT EKP   
Sbjct: 2   SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 4e-09
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKP++C    C KSF     L +H   HT 
Sbjct: 2  SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTA 37

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.0 bits (118), Expect = 4e-09
 Identities = 14/38 (36%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKP++C    C KSF     L +H   HT 
Sbjct: 2   SSGSSGTGEKPFKCDI--CGKSFCGRSRLNRHSMVHTA 37

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +P+ C    C KAFS       H R HTGEKP   + 
Sbjct: 3  SGSSGTGEKPFDC--IDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +P+ C    C KAFS       H R HTGEKP   + 
Sbjct: 3   SGSSGTGEKPFDC--IDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKP+ C    C K+F     L +H R HTG
Sbjct: 2  SSGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTG 37

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKP+ C    C K+F     L +H R HTG
Sbjct: 2   SSGSSGTGEKPFDCID--CGKAFSDHIGLNQHRRIHTG 37

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +P++C    C K+FS       H R HTGEKP   + 
Sbjct: 3  SGSSGTGEKPFEC--AECGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 15/45 (33%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +P++C    C K+FS       H R HTGEKP   + 
Sbjct: 3   SGSSGTGEKPFEC--AECGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 48.7 bits (117), Expect = 7e-09
 Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKP+ CA   C KSF  S  L  H R HTG
Sbjct: 3  SGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTG 37

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 48.7 bits (117), Expect = 7e-09
 Identities = 18/37 (48%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKP+ CA   C KSF  S  L  H R HTG
Sbjct: 3   SGSSGTGEKPFECAE--CGKSFSISSQLATHQRIHTG 37

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G RPY C V  C KAF+ + +   H + HTGEKP   + 
Sbjct: 3  SGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 1e-10
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G RPY C V  C KAF+ + +   H + HTGEKP   + 
Sbjct: 3   SGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 3e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGE+PY C    C K+F    +L KH + HTG
Sbjct: 2  SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTG 37

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 3e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGE+PY C    C K+F    +L KH + HTG
Sbjct: 2   SSGSSGTGERPYICTV--CGKAFTDRSNLIKHQKIHTG 37

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G R Y+C    C KAF+ + +   H R HTGEKP   + 
Sbjct: 3  SGSSGTGERHYEC--SECGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 16/45 (35%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G R Y+C    C KAF+ + +   H R HTGEKP   + 
Sbjct: 3   SGSSGTGERHYEC--SECGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGE+ Y C+   C K+F     L  H R HTG
Sbjct: 3  SGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTG 37

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 14/37 (37%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGE+ Y C+   C K+F     L  H R HTG
Sbjct: 3   SGSSGTGERHYECSE--CGKAFARKSTLIMHQRIHTG 37

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PYKC    C KAF+ +     H ++HTGE+    
Sbjct: 3  SGSSGTGEKPYKC--SDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 14/43 (32%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PYKC    C KAF+ +     H ++HTGE+    
Sbjct: 3   SGSSGTGEKPYKC--SDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKPY+C+   C K+F     L  H ++HTG
Sbjct: 3  SGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTG 37

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKPY+C+   C K+F     L  H ++HTG
Sbjct: 3   SGSSGTGEKPYKCSD--CGKAFTRKSGLHIHQQSHTG 37

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PYKC    C KAF  + S   H  TH+GEKP   
Sbjct: 3  SGSSGTGEKPYKC--NECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PYKC    C KAF  + S   H  TH+GEKP   
Sbjct: 3   SGSSGTGEKPYKC--NECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKPY+C    C K+F+    L  H  TH+G
Sbjct: 3  SGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSG 37

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKPY+C    C K+F+    L  H  TH+G
Sbjct: 3   SGSSGTGEKPYKCNE--CGKAFRARSSLAIHQATHSG 37

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 54.2 bits (130), Expect = 2e-10
 Identities = 22/101 (21%), Positives = 31/101 (30%), Gaps = 29/101 (28%)

Query: 35  THTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHTGKYTPGPGIDSRLIVREDFVHLRIHS 93
               +       + C ++F T  +L  HV   H G                         
Sbjct: 19  IDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVG-----------------------GP 53

Query: 94  GIRPYKCPVEYC---EKAFSTQYSRKAHIRTHTGEKPYRCA 131
               + C  E C    K+F  +Y    HIR HTGEK    +
Sbjct: 54  EQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 45.0 bits (106), Expect = 5e-07
 Identities = 21/80 (26%), Positives = 32/80 (40%), Gaps = 9/80 (11%)

Query: 82  VREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEKP---YRCAHEFCS- 136
           ++++     I           + C++ FST +    H+   H G      + C  E C  
Sbjct: 10  IKQELSCKWIDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR 67

Query: 137 --KSFKTSGDLQKHVRTHTG 154
             KSFK    L  H+R HTG
Sbjct: 68  EGKSFKAKYKLVNHIRVHTG 87

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 43.8 bits (103), Expect = 1e-06
 Identities = 21/71 (29%), Positives = 28/71 (39%), Gaps = 9/71 (12%)

Query: 5  IHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEKP---YRCAHEFCS---KSFKTSG 57
          I           + C++ FST +    H+   H G      + C  E C    KSFK   
Sbjct: 19 IDEAQLSRPK--KSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKY 76

Query: 58 DLQKHVRTHTG 68
           L  H+R HTG
Sbjct: 77 KLVNHIRVHTG 87

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 42.3 bits (99), Expect = 5e-06
 Identities = 16/48 (33%), Positives = 20/48 (41%), Gaps = 6/48 (12%)

Query: 4  RIHSGIRP---YKCPVEYC---EKAFSTQYSRKAHIRTHTGEKPYRCA 45
            H G      + C  E C    K+F  +Y    HIR HTGEK    +
Sbjct: 47 MEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS 94

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G R Y+C    C KAF  + +   H R H GEKP   + 
Sbjct: 3  SGSSGTGERHYEC--SECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G R Y+C    C KAF  + +   H R H GEKP   + 
Sbjct: 3   SGSSGTGERHYEC--SECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGE+ Y C+   C K+F     L  H R H G
Sbjct: 3  SGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRG 37

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGE+ Y C+   C K+F     L  H R H G
Sbjct: 3   SGSSGTGERHYECSE--CGKAFIQKSTLSMHQRIHRG 37

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PY C    C KAF+ + +   H + HT +KP   + 
Sbjct: 3  SGSSGTGEKPYIC--AECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 13/45 (28%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PY C    C KAF+ + +   H + HT +KP   + 
Sbjct: 3   SGSSGTGEKPYIC--AECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY CA   C K+F    +L KH + HT 
Sbjct: 2  SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTK 37

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY CA   C K+F    +L KH + HT 
Sbjct: 2   SSGSSGTGEKPYICAE--CGKAFTIRSNLIKHQKIHTK 37

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G + Y C  + C K+FS       H R H+GEKP   
Sbjct: 3  SGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G + Y C  + C K+FS       H R H+GEKP   
Sbjct: 3   SGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 3e-09
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEK Y C    C KSF  +  L KH R H+G
Sbjct: 2  SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSG 37

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 3e-09
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEK Y C    C KSF  +  L KH R H+G
Sbjct: 2   SSGSSGTGEKLYNCKE--CGKSFSRAPCLLKHERLHSG 37

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PYKC    C K F+       H   HTGEKP   + 
Sbjct: 3  SGSSGTGEKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PYKC    C K F+       H   HTGEKP   + 
Sbjct: 3   SGSSGTGEKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY+C    C K F  +  L +H   HTG
Sbjct: 2  SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTG 37

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY+C    C K F  +  L +H   HTG
Sbjct: 2   SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRGIHTG 37

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PYKC  E C K F  +     H   HTGEKP   
Sbjct: 3  SGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PYKC  E C K F  +     H   HTGEKP   
Sbjct: 3   SGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY+C    C K F    DL  H   HTG
Sbjct: 2  SSGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTG 37

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY+C    C K F    DL  H   HTG
Sbjct: 2   SSGSSGTGEKPYKCEE--CGKGFICRRDLYTHHMVHTG 37

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PYKC    C K F+       H   HTGEKP   + 
Sbjct: 3  SGSSGTGEKPYKC--NECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PYKC    C K F+       H   HTGEKP   + 
Sbjct: 3   SGSSGTGEKPYKC--NECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 4e-08
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY+C    C K F  +  L +H   HTG
Sbjct: 2  SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTG 37

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 4e-08
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY+C    C K F  +  L +H   HTG
Sbjct: 2   SSGSSGTGEKPYKCNE--CGKVFTQNSHLVRHRGIHTG 37

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 52.6 bits (127), Expect = 2e-10
 Identities = 15/81 (18%), Positives = 26/81 (32%), Gaps = 29/81 (35%)

Query: 31  AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLR 90
           +   + +  KPY C    C K F     L  H++                         +
Sbjct: 2   SSGSSGSVGKPYICQS--CGKGFSRPDHLNGHIK-------------------------Q 34

Query: 91  IHSGIRPYKCPVEYCEKAFST 111
           +H+  RP+KC  +      S+
Sbjct: 35  VHTSERPHKC--QVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 51.8 bits (125), Expect = 4e-10
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEKPYRCAHEFCSKSFKT 55
               S  +PY C  + C K FS       HI + HT E+P++C  +       +
Sbjct: 3  SGSSGSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 51.8 bits (125), Expect = 4e-10
 Identities = 15/55 (27%), Positives = 23/55 (41%), Gaps = 5/55 (9%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEKPYRCAHEFCSKSFKT 141
                S  +PY C  + C K FS       HI + HT E+P++C  +       +
Sbjct: 3   SGSSGSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 3/39 (7%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHTG 154
           +   + +  KPY C    C K F     L  H+ + HT 
Sbjct: 2   SSGSSGSVGKPYICQS--CGKGFSRPDHLNGHIKQVHTS 38

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 1  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
                +G +PY+C    C K+F  +     H R HTGE P   + 
Sbjct: 2  SSGSSGTGEKPYEC--SDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 14/46 (30%), Positives = 20/46 (43%), Gaps = 2/46 (4%)

Query: 87  VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                 +G +PY+C    C K+F  +     H R HTGE P   + 
Sbjct: 2   SSGSSGTGEKPYEC--SDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 5e-09
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY C+   C KSF     L  H R HTG
Sbjct: 2  SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTG 37

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 5e-09
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY C+   C KSF     L  H R HTG
Sbjct: 2   SSGSSGTGEKPYECSD--CGKSFIKKSQLHVHQRIHTG 37

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PY C V  C KAF        H+R HT E     + 
Sbjct: 3  SGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 14/45 (31%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PY C V  C KAF        H+R HT E     + 
Sbjct: 3   SGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKPY C    C K+F  S  L +H+R HT 
Sbjct: 3  SGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQ 37

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKPY C    C K+F  S  L +H+R HT 
Sbjct: 3   SGSSGTGEKPYSCNV--CGKAFVLSAHLNQHLRVHTQ 37

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PYKC    C K F+       H R HTG KP   + 
Sbjct: 3  SGSSGTGEKPYKC--NECGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 15/45 (33%), Positives = 19/45 (42%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PYKC    C K F+       H R HTG KP   + 
Sbjct: 3   SGSSGTGEKPYKC--NECGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY+C    C K F  +  L +H R HTG
Sbjct: 2  SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTG 37

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY+C    C K F  +  L +H R HTG
Sbjct: 2   SSGSSGTGEKPYKCNE--CGKVFTQNSHLARHRRVHTG 37

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G+ PYKC    CEK+FS +     H R HT EKP   
Sbjct: 3  SGSSGAGVNPYKC--SQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G+ PYKC    CEK+FS +     H R HT EKP   
Sbjct: 3   SGSSGAGVNPYKC--SQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   +  G  PY+C+   C KSF     L  H R HT 
Sbjct: 2  SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTR 37

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 47.5 bits (114), Expect = 1e-08
 Identities = 13/38 (34%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   +  G  PY+C+   C KSF     L  H R HT 
Sbjct: 2   SSGSSGAGVNPYKCSQ--CEKSFSGKLRLLVHQRMHTR 37

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               SG +PYKC    C K +  +     H R HTGEK    
Sbjct: 3  SGSSGSGEKPYKC--VECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                SG +PYKC    C K +  +     H R HTGEK    
Sbjct: 3   SGSSGSGEKPYKC--VECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + +GEKPY+C    C K +K   DL  H R HTG
Sbjct: 2  SSGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTG 37

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + +GEKPY+C    C K +K   DL  H R HTG
Sbjct: 2   SSGSSGSGEKPYKCVE--CGKGYKRRLDLDFHQRVHTG 37

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               SG +PYKC    C K F+       H R HTGEKP   + 
Sbjct: 3  SGSSGSGEKPYKC--NECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 17/45 (37%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                SG +PYKC    C K F+       H R HTGEKP   + 
Sbjct: 3   SGSSGSGEKPYKC--NECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 6e-08
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + +GEKPY+C    C K F  +  L  H R HTG
Sbjct: 2  SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTG 37

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 6e-08
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + +GEKPY+C    C K F  +  L  H R HTG
Sbjct: 2   SSGSSGSGEKPYKCNE--CGKVFTQNSHLTNHWRIHTG 37

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               SG +PY C  +YC KAF        H R HTGEKP   + 
Sbjct: 3  SGSSGSGEKPYVC--DYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 18/45 (40%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                SG +PY C  +YC KAF        H R HTGEKP   + 
Sbjct: 3   SGSSGSGEKPYVC--DYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + +GEKPY C +  C K+F  S +L +H R HTG
Sbjct: 3  SGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTG 37

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 16/37 (43%), Positives = 22/37 (59%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + +GEKPY C +  C K+F  S +L +H R HTG
Sbjct: 3   SGSSGSGEKPYVCDY--CGKAFGLSAELVRHQRIHTG 37

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               SG +P+KC  E C K F+      +H R HTGEKP   
Sbjct: 3  SGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 17/43 (39%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                SG +P+KC  E C K F+      +H R HTGEKP   
Sbjct: 3   SGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + +GEKP++C    C K F  +  L  H R HTG
Sbjct: 3  SGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTG 37

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + +GEKP++C    C K F  +  L  H R HTG
Sbjct: 3   SGSSGSGEKPFKCEE--CGKRFTQNSQLHSHQRVHTG 37

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +P++C    C+KAF+T+ +   H RTHTGEKP   
Sbjct: 3  SGSSGTGEKPFEC--SECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 17/43 (39%), Positives = 25/43 (58%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +P++C    C+KAF+T+ +   H RTHTGEKP   
Sbjct: 3   SGSSGTGEKPFEC--SECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKP+ C+   C K+F T  +L  H RTHTG
Sbjct: 2  SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTG 37

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKP+ C+   C K+F T  +L  H RTHTG
Sbjct: 2   SSGSSGTGEKPFECSE--CQKAFNTKSNLIVHQRTHTG 37

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 3e-10
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PYKC    C K+F+ +   + H + HTGE+    
Sbjct: 3  SGSSGTGEKPYKC--SDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 3e-10
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PYKC    C K+F+ +   + H + HTGE+    
Sbjct: 3   SGSSGTGEKPYKC--SDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY+C+   C KSF     L+ H + HTG
Sbjct: 2  SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTG 37

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY+C+   C KSF     L+ H + HTG
Sbjct: 2   SSGSSGTGEKPYKCSD--CGKSFTWKSRLRIHQKCHTG 37

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G RP+KC    C K+F        H R HTGEKP   + 
Sbjct: 3  SGSSGTGERPHKC--NECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 16/45 (35%), Positives = 20/45 (44%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G RP+KC    C K+F        H R HTGEKP   + 
Sbjct: 3   SGSSGTGERPHKC--NECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 5e-08
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGE+P++C    C KSF  S  L +H R HTG
Sbjct: 3  SGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTG 37

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 5e-08
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGE+P++C    C KSF  S  L +H R HTG
Sbjct: 3   SGSSGTGERPHKCNE--CGKSFIQSAHLIQHQRIHTG 37

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G + ++C    C KAF+ + +   H + HTGEKP   + 
Sbjct: 3  SGSSGTGGKHFEC--TECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 13/45 (28%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G + ++C    C KAF+ + +   H + HTGEKP   + 
Sbjct: 3   SGSSGTGGKHFEC--TECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TG K + C    C K+F     L  H + HTG
Sbjct: 2  SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTG 37

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 12/38 (31%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TG K + C    C K+F     L  H + HTG
Sbjct: 2   SSGSSGTGGKHFECTE--CGKAFTRKSTLSMHQKIHTG 37

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               SG +PYKC    C KAF        H R HTG +P   
Sbjct: 3  SGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                SG +PYKC    C KAF        H R HTG +P   
Sbjct: 3   SGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 5e-08
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + +GEKPY+C    C K+F     L +H R HTG
Sbjct: 3  SGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTG 37

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 5e-08
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + +GEKPY+C    C K+F     L +H R HTG
Sbjct: 3   SGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTG 37

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-10
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PY C  E C KAF      + H R HTGEKP   
Sbjct: 3  SGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 3e-10
 Identities = 17/43 (39%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PY C  E C KAF      + H R HTGEKP   
Sbjct: 3   SGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY C    C K+F     LQ+H R HTG
Sbjct: 2  SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTG 37

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 17/38 (44%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY C    C K+F     LQ+H R HTG
Sbjct: 2   SSGSSGTGEKPYNCEE--CGKAFIHDSQLQEHQRIHTG 37

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 51.8 bits (125), Expect = 4e-10
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G++PY C    C K FS +     H R+HTG KP   
Sbjct: 3  SGSSGTGVKPYGC--SQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 51.8 bits (125), Expect = 4e-10
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G++PY C    C K FS +     H R+HTG KP   
Sbjct: 3   SGSSGTGVKPYGC--SQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 49.5 bits (119), Expect = 4e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TG KPY C+   C+K+F     L  H R+HTG
Sbjct: 2  SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTG 37

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 49.5 bits (119), Expect = 4e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TG KPY C+   C+K+F     L  H R+HTG
Sbjct: 2   SSGSSGTGVKPYGCSQ--CAKTFSLKSQLIVHQRSHTG 37

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 4e-10
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PYKC    C KAF    +   H   HTGEKP   
Sbjct: 3  SGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 4e-10
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PYKC    C KAF    +   H   HTGEKP   
Sbjct: 3   SGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY+C    C K+F+   +L  H   HTG
Sbjct: 2  SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTG 37

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY+C    C K+F+   +L  H   HTG
Sbjct: 2   SSGSSGTGEKPYKCNE--CGKAFRAHSNLTTHQVIHTG 37

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 51.8 bits (125), Expect = 4e-10
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PY C  + C K+F        H R H+GEKP   
Sbjct: 3  SGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 51.8 bits (125), Expect = 4e-10
 Identities = 14/43 (32%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PY C  + C K+F        H R H+GEKP   
Sbjct: 3   SGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY C    C KSF+ +  L KH R H+G
Sbjct: 2  SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSG 37

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY C    C KSF+ +  L KH R H+G
Sbjct: 2   SSGSSGTGEKPYNCKE--CGKSFRWASCLLKHQRVHSG 37

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 4e-10
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PYKC    C K F+       H R HTG KP   
Sbjct: 3  SGSSGTGEKPYKC--NECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 4e-10
 Identities = 15/43 (34%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PYKC    C K F+       H R HTG KP   
Sbjct: 3   SGSSGTGEKPYKC--NECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY+C    C K F  +  L  H R HTG
Sbjct: 2  SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTG 37

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 3e-08
 Identities = 16/38 (42%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY+C    C K F  +  L  H R HTG
Sbjct: 2   SSGSSGTGEKPYKCNE--CGKVFTQNSHLANHQRIHTG 37

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.7 bits (125), Expect = 4e-10
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G++PY C    C KAF ++     H RTHTGE     
Sbjct: 3  SGSSGTGMKPYVC--NECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.7 bits (125), Expect = 4e-10
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G++PY C    C KAF ++     H RTHTGE     
Sbjct: 3   SGSSGTGMKPYVC--NECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TG KPY C    C K+F++   L  H RTHTG
Sbjct: 2  SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTG 37

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TG KPY C    C K+F++   L  H RTHTG
Sbjct: 2   SSGSSGTGMKPYVCNE--CGKAFRSKSYLIIHTRTHTG 37

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 5e-10
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               SG +P+KC  E C K F T     +H R+H+GEKP   
Sbjct: 3  SGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 5e-10
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                SG +P+KC  E C K F T     +H R+H+GEKP   
Sbjct: 3   SGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 2e-09
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + +GEKP++C    C K F T+     H R+H+G
Sbjct: 2  SSGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSG 37

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 49.9 bits (120), Expect = 2e-09
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + +GEKP++C    C K F T+     H R+H+G
Sbjct: 2   SSGSSGSGEKPFKCEE--CGKGFYTNSQCYSHQRSHSG 37

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
              +  GEKPYRC    C K+F   G L  H+R HTG
Sbjct: 1  GSSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTG 36

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
               +  GEKPYRC    C K+F   G L  H+R HTG
Sbjct: 1   GSSGSSGGEKPYRCDQ--CGKAFSQKGSLIVHIRVHTG 36

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 42
                G +PY+C  + C KAFS + S   HIR HTG  P 
Sbjct: 2  SSGSSGGEKPYRC--DQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 17/41 (41%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 128
                 G +PY+C  + C KAFS + S   HIR HTG  P 
Sbjct: 2   SSGSSGGEKPYRC--DQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +PY+C  + C KAFS       H R HTGEKP   + 
Sbjct: 3  SGSSGTGEKPYEC--KECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 17/45 (37%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +PY+C  + C KAFS       H R HTGEKP   + 
Sbjct: 3   SGSSGTGEKPYEC--KECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 46.7 bits (112), Expect = 4e-08
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKPY C    C K+F  +  L +H R HTG
Sbjct: 3  SGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTG 37

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 46.7 bits (112), Expect = 4e-08
 Identities = 16/37 (43%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKPY C    C K+F  +  L +H R HTG
Sbjct: 3   SGSSGTGEKPYECKE--CGKAFSQTTHLIQHQRVHTG 37

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
                G + +KC    C+  FS   S + H   H GEKP   
Sbjct: 3  SGSSGMGEKTWKC--RECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                 G + +KC    C+  FS   S + H   H GEKP   
Sbjct: 3   SGSSGMGEKTWKC--RECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   +  GEK ++C    C   F  +  L+ H   H G
Sbjct: 2  SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVG 37

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   +  GEK ++C    C   F  +  L+ H   H G
Sbjct: 2   SSGSSGMGEKTWKCRE--CDMCFSQASSLRLHQNVHVG 37

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 46
               +G +P+KC    C K+++ +     H R HTGEKP   + 
Sbjct: 3  SGSSGTGEKPFKC--GECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 14/45 (31%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH 132
                +G +P+KC    C K+++ +     H R HTGEKP   + 
Sbjct: 3   SGSSGTGEKPFKC--GECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKP++C    C KS+     L +H R HTG
Sbjct: 3  SGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTG 37

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 15/37 (40%), Positives = 20/37 (54%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKP++C    C KS+     L +H R HTG
Sbjct: 3   SGSSGTGEKPFKCGE--CGKSYNQRVHLTQHQRVHTG 37

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 7e-10
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               SG +P+KC  + C KAF       +H+R HTGEKP   
Sbjct: 3  SGSSGSGEKPFKC--KECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.3 bits (124), Expect = 7e-10
 Identities = 17/43 (39%), Positives = 22/43 (51%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                SG +P+KC  + C KAF       +H+R HTGEKP   
Sbjct: 3   SGSSGSGEKPFKC--KECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + +GEKP++C    C K+F+ +  L  H+R HTG
Sbjct: 2  SSGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTG 37

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 14/38 (36%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + +GEKP++C    C K+F+ +  L  H+R HTG
Sbjct: 2   SSGSSGSGEKPFKCKE--CGKAFRQNIHLASHLRIHTG 37

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 7e-10
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               SG +P++C  E C K F+      +H R HTGEKP   
Sbjct: 3  SGSSGSGEKPFQC--EECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 7e-10
 Identities = 16/43 (37%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                SG +P++C  E C K F+      +H R HTGEKP   
Sbjct: 3   SGSSGSGEKPFQC--EECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + +GEKP++C    C K F  +  L  H R HTG
Sbjct: 3  SGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTG 37

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 14/37 (37%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + +GEKP++C    C K F  +  L  H R HTG
Sbjct: 3   SGSSGSGEKPFQCEE--CGKRFTQNSHLHSHQRVHTG 37

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 51.0 bits (123), Expect = 8e-10
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +P++C   +C K+F  + +   H R HTGEK    
Sbjct: 3  SGSSGTGQKPFEC--THCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 51.0 bits (123), Expect = 8e-10
 Identities = 13/43 (30%), Positives = 21/43 (48%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +P++C   +C K+F  + +   H R HTGEK    
Sbjct: 3   SGSSGTGQKPFEC--THCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TG+KP+ C H  C KSF+  G+L  H R HTG
Sbjct: 2  SSGSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTG 37

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 17/38 (44%), Positives = 23/38 (60%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TG+KP+ C H  C KSF+  G+L  H R HTG
Sbjct: 2   SSGSSGTGQKPFECTH--CGKSFRAKGNLVTHQRIHTG 37

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 8e-10
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G  P+ C    C K F+ + +   H + HTGE+P   
Sbjct: 3  SGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 8e-10
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G  P+ C    C K F+ + +   H + HTGE+P   
Sbjct: 3   SGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 3e-09
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGE P+ C+   C K F    +L  H + HTG
Sbjct: 2  SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTG 37

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.4 bits (119), Expect = 3e-09
 Identities = 13/38 (34%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGE P+ C+   C K F    +L  H + HTG
Sbjct: 2   SSGSSGTGENPFICSE--CGKVFTHKTNLIIHQKIHTG 37

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 8e-10
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PYKC    C K F        H R HTGEKP   
Sbjct: 3  SGSSGTGEKPYKC--NECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 8e-10
 Identities = 16/43 (37%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PYKC    C K F        H R HTGEKP   
Sbjct: 3   SGSSGTGEKPYKC--NECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKPY+C    C K F+ +  L +H R HTG
Sbjct: 3  SGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTG 37

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 16/37 (43%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKPY+C    C K F+ +  L +H R HTG
Sbjct: 3   SGSSGTGEKPYKCNE--CGKVFRHNSYLSRHQRIHTG 37

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 9e-10
 Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 45
               SG RPY C    C K F        H++ H  EK    +
Sbjct: 3  SGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.0 bits (123), Expect = 9e-10
 Identities = 13/44 (29%), Positives = 16/44 (36%), Gaps = 2/44 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 131
                SG RPY C    C K F        H++ H  EK    +
Sbjct: 3   SGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + +GE+PY C    C K+F     L +H++ H  
Sbjct: 3  SGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFR 37

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + +GE+PY C    C K+F     L +H++ H  
Sbjct: 3   SGSSGSGERPYGCNE--CGKNFGRHSHLIEHLKRHFR 37

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 9e-10
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PY+C  + C KAF+ +     H +THTGEKP   
Sbjct: 3  SGSSGTGEKPYEC--KVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 9e-10
 Identities = 16/43 (37%), Positives = 23/43 (53%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PY+C  + C KAF+ +     H +THTGEKP   
Sbjct: 3   SGSSGTGEKPYEC--KVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 3e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY C    CSK+F     L +H +THTG
Sbjct: 2  SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTG 37

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.5 bits (119), Expect = 3e-09
 Identities = 17/38 (44%), Positives = 22/38 (57%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY C    CSK+F     L +H +THTG
Sbjct: 2   SSGSSGTGEKPYECKV--CSKAFTQKAHLAQHQKTHTG 37

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-09
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
                G +PY+C    C K+FS  Y    H  THT EKP   
Sbjct: 3  SGSSGEGEKPYQC--SECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-09
 Identities = 16/43 (37%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                 G +PY+C    C K+FS  Y    H  THT EKP   
Sbjct: 3   SGSSGEGEKPYQC--SECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   +  GEKPY+C+   C KSF  S  L +H  THT 
Sbjct: 2  SSGSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTR 37

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 16/38 (42%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   +  GEKPY+C+   C KSF  S  L +H  THT 
Sbjct: 2   SSGSSGEGEKPYQCSE--CGKSFSGSYRLTQHWITHTR 37

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PYKC V  C KAF        H   H+GE+P   
Sbjct: 3  SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.6 bits (122), Expect = 1e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PYKC V  C KAF        H   H+GE+P   
Sbjct: 3   SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 7e-08
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + TGEKPY+C    C K+F+ S  L +H   H+G
Sbjct: 3  SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSG 37

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 7e-08
 Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + TGEKPY+C    C K+F+ S  L +H   H+G
Sbjct: 3   SGSSGTGEKPYKCQV--CGKAFRVSSHLVQHHSVHSG 37

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               SG +PY+C    C KAF  +     H RTH G      
Sbjct: 3  SGSSGSGEKPYEC--NECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 50.2 bits (121), Expect = 1e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                SG +PY+C    C KAF  +     H RTH G      
Sbjct: 3   SGSSGSGEKPYEC--NECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + +GEKPY C    C K+F     L  H RTH G
Sbjct: 2  SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAG 37

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 15/38 (39%), Positives = 19/38 (50%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + +GEKPY C    C K+F     L  H RTH G
Sbjct: 2   SSGSSGSGEKPYECNE--CGKAFIWKSLLIVHERTHAG 37

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PYKC    C K F        H   HTGEKP   
Sbjct: 3  SGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PYKC    C K F        H   HTGEKP   
Sbjct: 3   SGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.5 bits (109), Expect = 8e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY+C    C K F+ +  L +H   HTG
Sbjct: 2  SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTG 37

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.5 bits (109), Expect = 8e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY+C    C K F+ +  L +H   HTG
Sbjct: 2   SSGSSGTGEKPYKCHE--CGKVFRRNSHLARHQLIHTG 37

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 4  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
             SG +P+ C    CEKAFS++     H +TH  EKP   
Sbjct: 3  SGSSGEKPFGC--SCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 16/41 (39%), Positives = 21/41 (51%), Gaps = 2/41 (4%)

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
              SG +P+ C    CEKAFS++     H +TH  EKP   
Sbjct: 3   SGSSGEKPFGC--SCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.1 bits (105), Expect = 4e-07
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 34 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             +GEKP+ C+   C K+F +   L  H +TH  
Sbjct: 3  SGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAE 35

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.1 bits (105), Expect = 4e-07
 Identities = 12/35 (34%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              +GEKP+ C+   C K+F +   L  H +TH  
Sbjct: 3   SGSSGEKPFGCSC--CEKAFSSKSYLLVHQQTHAE 35

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +PY C    C K+F  +     H R HTGEKP   
Sbjct: 3  SGSSGTGEKPYIC--NECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 2e-09
 Identities = 15/43 (34%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +PY C    C K+F  +     H R HTGEKP   
Sbjct: 3   SGSSGTGEKPYIC--NECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKPY C    C KSF     L +H R HTG
Sbjct: 2  SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTG 37

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 17/38 (44%), Positives = 20/38 (52%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKPY C    C KSF     L +H R HTG
Sbjct: 2   SSGSSGTGEKPYICNE--CGKSFIQKSHLNRHRRIHTG 37

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 50.4 bits (120), Expect = 3e-09
 Identities = 21/73 (28%), Positives = 24/73 (32%), Gaps = 11/73 (15%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
            +IH G R  KC    C   F           T +  K   C  E C K       L K
Sbjct: 9  RQKIHLGDRSQKC--SKCGIIFI-------RRSTLSRRKTPMC--EKCRKDSCQEAALNK 57

Query: 62 HVRTHTGKYTPGP 74
               +GK T GP
Sbjct: 58 DEGNESGKKTSGP 70

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 36.9 bits (85), Expect = 2e-04
 Identities = 13/101 (12%), Positives = 24/101 (23%), Gaps = 37/101 (36%)

Query: 28  SRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFV 87
           S     + H G++  +C+   C   F     L +                          
Sbjct: 5   SSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSRR------------------------- 37

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 128
                   +   C  E C K    + +        +G+K  
Sbjct: 38  --------KTPMC--EKCRKDSCQEAALNKDEGNESGKKTS 68

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               SG RP+KC    C K F  +     H+R H+ EK    
Sbjct: 3  SGSSGSGERPFKC--NECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.1 bits (118), Expect = 4e-09
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                SG RP+KC    C K F  +     H+R H+ EK    
Sbjct: 3   SGSSGSGERPFKC--NECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 9e-08
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + +GE+P++C    C K F     L  H+R H+ 
Sbjct: 3  SGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSR 37

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 9e-08
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + +GE+P++C    C K F     L  H+R H+ 
Sbjct: 3   SGSSGSGERPFKCNE--CGKGFGRRSHLAGHLRLHSR 37

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.7 bits (117), Expect = 5e-09
 Identities = 14/44 (31%), Positives = 18/44 (40%), Gaps = 2/44 (4%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPG 75
             + T  K Y C    C K+F     L +H + HT K  P  G
Sbjct: 3  SGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRKSGPSSG 44

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 7e-08
 Identities = 12/38 (31%), Positives = 16/38 (42%), Gaps = 2/38 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
              + T  K Y C    C K+F     L +H + HT K
Sbjct: 3   SGSSGTDSKSYNCNE--CGKAFTRIFHLTRHQKIHTRK 38

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 2/44 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 45
               +  + Y C    C KAF+  +    H + HT +      
Sbjct: 3  SGSSGTDSKSYNC--NECGKAFTRIFHLTRHQKIHTRKSGPSSG 44

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.0 bits (97), Expect = 4e-06
 Identities = 9/44 (20%), Positives = 15/44 (34%), Gaps = 2/44 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 131
                +  + Y C    C KAF+  +    H + HT +      
Sbjct: 3   SGSSGTDSKSYNC--NECGKAFTRIFHLTRHQKIHTRKSGPSSG 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 7e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
                G R ++C    C K F    +   H R HTGEKP   
Sbjct: 3  SGSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 48.7 bits (117), Expect = 7e-09
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                 G R ++C    C K F    +   H R HTGEKP   
Sbjct: 3   SGSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             +  GE+ +RC+   C K F  + +  +H R HTG
Sbjct: 3  SGSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTG 37

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 12/37 (32%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              +  GE+ +RC+   C K F  + +  +H R HTG
Sbjct: 3   SGSSGHGERGHRCSD--CGKFFLQASNFIQHRRIHTG 37

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 48.3 bits (116), Expect = 7e-09
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 4  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
             SG  PY+C    C KAF+ +    +H RTH GE     
Sbjct: 3  SGSSGENPYEC--SECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 48.3 bits (116), Expect = 7e-09
 Identities = 15/41 (36%), Positives = 19/41 (46%), Gaps = 2/41 (4%)

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
              SG  PY+C    C KAF+ +    +H RTH GE     
Sbjct: 3   SGSSGENPYEC--SECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 34 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             +GE PY C+   C K+F     L  H RTH G
Sbjct: 3  SGSSGENPYECSE--CGKAFNRKDQLISHQRTHAG 35

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 14/35 (40%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              +GE PY C+   C K+F     L  H RTH G
Sbjct: 3   SGSSGENPYECSE--CGKAFNRKDQLISHQRTHAG 35

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               SG +PY+C  + C K F        H R HTGE+    
Sbjct: 3  SGSSGSGKKPYEC--KECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 14/43 (32%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                SG +PY+C  + C K F        H R HTGE+    
Sbjct: 3   SGSSGSGKKPYEC--KECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + +G+KPY C    C K+F   G L +H R HTG
Sbjct: 2  SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTG 37

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 2e-08
 Identities = 15/38 (39%), Positives = 21/38 (55%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + +G+KPY C    C K+F   G L +H R HTG
Sbjct: 2   SSGSSGSGKKPYECKE--CRKTFIQIGHLNQHKRVHTG 37

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGEKP +C    C K+F     L  H RTH  
Sbjct: 2  SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVD 37

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGEKP +C    C K+F     L  H RTH  
Sbjct: 2   SSGSSGTGEKPCKCTE--CGKAFCWKSQLIMHQRTHVD 37

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G +P KC    C KAF  +     H RTH  +K    
Sbjct: 3  SGSSGTGEKPCKC--TECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G +P KC    C KAF  +     H RTH  +K    
Sbjct: 3   SGSSGTGEKPCKC--TECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 48.2 bits (114), Expect = 1e-08
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 12 YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          Y C  E C          K HIRTHT  +PY C +  C+ SFKT G+L KH+++   
Sbjct: 2  YIC--EECGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 48.2 bits (114), Expect = 1e-08
 Identities = 23/57 (40%), Positives = 30/57 (52%), Gaps = 4/57 (7%)

Query: 98  YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           Y C  E C          K HIRTHT  +PY C +  C+ SFKT G+L KH+++   
Sbjct: 2   YIC--EECGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAH 54

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.2 bits (88), Expect = 6e-05
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 40
          H+R H+ +RPY C   YC  +F T+ +   H+++    K
Sbjct: 20 HIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 38.2 bits (88), Expect = 6e-05
 Identities = 13/39 (33%), Positives = 22/39 (56%), Gaps = 2/39 (5%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
           H+R H+ +RPY C   YC  +F T+ +   H+++    K
Sbjct: 20  HIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSKAHSK 56

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               +G  PY+C    C K FS +    +H +TH+G+     
Sbjct: 3  SGSSGTGENPYEC--CECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 12/43 (27%), Positives = 19/43 (44%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                +G  PY+C    C K FS +    +H +TH+G+     
Sbjct: 3   SGSSGTGENPYEC--CECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.3 bits (111), Expect = 5e-08
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +   + TGE PY C    C K F     L  H +TH+G
Sbjct: 2  SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSG 37

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 46.3 bits (111), Expect = 5e-08
 Identities = 14/38 (36%), Positives = 18/38 (47%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +   + TGE PY C    C K F     L  H +TH+G
Sbjct: 2   SSGSSGTGENPYECCE--CGKVFSRKDQLVSHQKTHSG 37

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 46.9 bits (112), Expect = 3e-08
 Identities = 16/42 (38%), Positives = 22/42 (52%), Gaps = 2/42 (4%)

Query: 34 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPG 75
             +GEKPY CA   C ++F  +  L +H + HT K  P  G
Sbjct: 3  SGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSSG 42

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.1 bits (102), Expect = 7e-07
 Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
              +GEKPY CA   C ++F  +  L +H + HT K
Sbjct: 3   SGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVK 36

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.7 bits (88), Expect = 7e-05
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 4  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
             SG +PY C    C++ FS       H + HT +     
Sbjct: 3  SGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 37.7 bits (88), Expect = 7e-05
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
              SG +PY C    C++ FS       H + HT +     
Sbjct: 3   SGSSGEKPYSCAE--CKETFSDNNRLVQHQKMHTVKSGPSS 41

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRC 44
               +G +PY+C    C KAF    S   H R  HTGEKP   
Sbjct: 3  SGSSGTGKKPYEC--IECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 17/44 (38%), Positives = 20/44 (45%), Gaps = 3/44 (6%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRC 130
                +G +PY+C    C KAF    S   H R  HTGEKP   
Sbjct: 3   SGSSGTGKKPYEC--IECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTG 68
          +   + TG+KPY C    C K+F  +  L +H R  HTG
Sbjct: 2  SSGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTG 38

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTG 154
           +   + TG+KPY C    C K+F  +  L +H R  HTG
Sbjct: 2   SSGSSGTGKKPYECIE--CGKAFIQNTSLIRHWRYYHTG 38

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             + +  K ++C    C + F     L +H R HTG
Sbjct: 3  SGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTG 37

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 4e-08
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + +  K ++C    C + F     L +H R HTG
Sbjct: 3   SGSSGSSTKSHQCHE--CGRGFTLKSHLNQHQRIHTG 37

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               S  + ++C    C + F+ +     H R HTGEKP   
Sbjct: 3  SGSSGSSTKSHQC--HECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.8 bits (107), Expect = 1e-07
 Identities = 12/43 (27%), Positives = 18/43 (41%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                S  + ++C    C + F+ +     H R HTGEKP   
Sbjct: 3   SGSSGSSTKSHQC--HECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 2/43 (4%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGP 74
             + +GEK + C    C K+F     L+ H R H G+   GP
Sbjct: 3  SGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.7 bits (109), Expect = 8e-08
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
               SG + + C  + C K F    + + H R H GEK    
Sbjct: 3  SGSSGSGEKSHTC--DECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.7 bits (109), Expect = 8e-08
 Identities = 12/43 (27%), Positives = 17/43 (39%), Gaps = 2/43 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
                SG + + C  + C K F    + + H R H GEK    
Sbjct: 3   SGSSGSGEKSHTC--DECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.7 bits (109), Expect = 9e-08
 Identities = 12/37 (32%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              + +GEK + C    C K+F     L+ H R H G
Sbjct: 3   SGSSGSGEKSHTCDE--CGKNFCYISALRIHQRVHMG 37

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.7 bits (109), Expect = 7e-08
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
              +  GE PY C    C KSF   G L  H R+ + 
Sbjct: 1  GSSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQ 36

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 45.7 bits (109), Expect = 7e-08
 Identities = 13/38 (34%), Positives = 16/38 (42%), Gaps = 2/38 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
               +  GE PY C    C KSF   G L  H R+ + 
Sbjct: 1   GSSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQ 36

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 42.7 bits (101), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 42
                G  PY C    C K+F+ + S   H R+ +   P 
Sbjct: 2  SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 42.7 bits (101), Expect = 1e-06
 Identities = 11/41 (26%), Positives = 16/41 (39%), Gaps = 2/41 (4%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 128
                 G  PY C    C K+F+ + S   H R+ +   P 
Sbjct: 2   SSGSSGGETPYLCGQ--CGKSFTQRGSLAVHQRSCSQSGPS 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 44.1 bits (104), Expect = 3e-07
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 2/45 (4%)

Query: 31 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPG 75
          +   +  GE P++C+   C + F     L +H RTH  K  P  G
Sbjct: 2  SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARKSGPSSG 44

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.5 bits (92), Expect = 2e-05
 Identities = 12/39 (30%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           +   +  GE P++C+   C + F     L +H RTH  K
Sbjct: 2   SSGSSGAGENPFKCSK--CDRVFTQRNYLVQHERTHARK 38

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 43.4 bits (103), Expect = 4e-07
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 40 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +P+ C   +C K F  S +LQ+H RTHTG
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 43.4 bits (103), Expect = 4e-07
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +P+ C   +C K F  S +LQ+H RTHTG
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 40
          RP+ C   YC K F+     + H RTHTGEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A Length = 31

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
           RP+ C   YC K F+     + H RTHTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 43.5 bits (103), Expect = 5e-07
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 66
            R  TG KP++C    C +SF  S  L  H + H
Sbjct: 2  STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 43.5 bits (103), Expect = 5e-07
 Identities = 13/35 (37%), Positives = 17/35 (48%), Gaps = 2/35 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 152
             R  TG KP++C    C +SF  S  L  H + H
Sbjct: 2   STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTH 36
            R  +GI+P++CP   C+++FS       H + H
Sbjct: 2  STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH 34

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 11/35 (31%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTH 122
             R  +GI+P++CP   C+++FS       H + H
Sbjct: 2   STRGSTGIKPFQCPD--CDRSFSRSDHLALHRKRH 34

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 34 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
             +G++ Y C    C KSF+  G L  H R HTG
Sbjct: 3  SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTG 35

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 43.3 bits (103), Expect = 6e-07
 Identities = 14/35 (40%), Positives = 18/35 (51%), Gaps = 2/35 (5%)

Query: 120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
              +G++ Y C    C KSF+  G L  H R HTG
Sbjct: 3   SGSSGQRVYECQE--CGKSFRQKGSLTLHERIHTG 35

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 4  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 42
             SG R Y+C  + C K+F  + S   H R HTG  P 
Sbjct: 3  SGSSGQRVYEC--QECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY 128
              SG R Y+C  + C K+F  + S   H R HTG  P 
Sbjct: 3   SGSSGQRVYEC--QECGKSFRQKGSLTLHERIHTGSGPS 39

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 42.2 bits (99), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)

Query: 4  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 45
                +   C  E C K F   Y    H  +H+GEKPY   
Sbjct: 5  SSGRTRKQVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSSG 44

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 42.2 bits (99), Expect = 2e-06
 Identities = 13/42 (30%), Positives = 16/42 (38%), Gaps = 2/42 (4%)

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA 131
                 +   C  E C K F   Y    H  +H+GEKPY   
Sbjct: 5   SSGRTRKQVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSSG 44

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 42.6 bits (99), Expect = 6e-06
 Identities = 29/123 (23%), Positives = 37/123 (30%), Gaps = 14/123 (11%)

Query: 37  TGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVH-------L 89
           +G K Y   H+            + H  T   K      I   LI     +        L
Sbjct: 8   SGSKKYLSNHKGIFIHVTLEELKRYHQLTPEQKRLIR-AIVKTLIHNPQLLDESSYLYRL 66

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV 149
                I  + CP   C   FS+  S K HIR    E    C    C K F ++     HV
Sbjct: 67  LASKAISQFVCP--LCLMPFSSSVSLKQHIRYT--EHTKVC--PVCKKEFTSTDSALDHV 120

Query: 150 RTH 152
              
Sbjct: 121 CKK 123

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 40.3 bits (93), Expect = 4e-05
 Identities = 19/65 (29%), Positives = 23/65 (35%), Gaps = 6/65 (9%)

Query: 2   HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQK 61
            L     I  + CP   C   FS+  S K HIR    E    C    C K F ++     
Sbjct: 65  RLLASKAISQFVCP--LCLMPFSSSVSLKQHIRYT--EHTKVC--PVCKKEFTSTDSALD 118

Query: 62  HVRTH 66
           HV   
Sbjct: 119 HVCKK 123

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 40
          + + C ++ C K +      +AH+R HTGE+
Sbjct: 7  KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 10/31 (32%), Positives = 18/31 (58%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
           + + C ++ C K +      +AH+R HTGE+
Sbjct: 7   KQHICHIQGCGKVYGKTSHLRAHLRWHTGER 37

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 37 TGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
            +K + C  + C K +  +  L+ H+R HTG
Sbjct: 4  GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG 35

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens} Length = 37

 Score = 36.2 bits (84), Expect = 2e-04
 Identities = 10/32 (31%), Positives = 17/32 (53%)

Query: 123 TGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
             +K + C  + C K +  +  L+ H+R HTG
Sbjct: 4   GKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG 35

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 38.7 bits (89), Expect = 6e-04
 Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 2/52 (3%)

Query: 15  PVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 66
             E      S   +R     T +    Y+C    CS    +  DL  HV +H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHV--CSAVLFSPLDLDAHVASH 203

>1ej6_B Lambda1; icosahedral, non-equivalence, dsRNA virus, methylase, methyltransferase, guanylyltransferase, zinc finger, icosahedral virus; 3.60A {Reovirus SP} SCOP: i.7.1.1 PDB: 2cse_V Length = 1275

 Score = 38.7 bits (89), Expect = 6e-04
 Identities = 13/52 (25%), Positives = 18/52 (34%), Gaps = 2/52 (3%)

Query: 101 PVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 152
             E      S   +R     T +    Y+C    CS    +  DL  HV +H
Sbjct: 154 IAEATSAIVSKHPARVGLPPTASSGHGYQCHV--CSAVLFSPLDLDAHVASH 203

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	175
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.96
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.94
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.94
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.93
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.92
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.92
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.89
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.87
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.85
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.82
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.8
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.8
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.8
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.8
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.8
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.79
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.79
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.78
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.78
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.78
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.76
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.76
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.75
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.74
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.74
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.73
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.73
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.72
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.71
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.71
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.69
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.69
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.67
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.67
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.67
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.66
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.65
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.64
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.64
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.63
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.63
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.63
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.62
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.62
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.58
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.57
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.56
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.55
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.54
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.54
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.54
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.54
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.52
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.51
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.51
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.51
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.5
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.5
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.49
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.49
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.49
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.48
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.47
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.46
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.46
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.45
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.44
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.44
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.44
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.44
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.44
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.43
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.43
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.43
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.43
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.43
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.43
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.43
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.43
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.42
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.42
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.42
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.42
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.42
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.42
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.42
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.42
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.42
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.42
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.42
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.41
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.41
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.41
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.41
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.41
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.41
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.41
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.4
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.39
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.39
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.39
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.39
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.38
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.38
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.37
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.37
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.36
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.34
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.34
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.32
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.32
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.32
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.32
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.31
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.31
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.31
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.31
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.31
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.31
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.31
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.3
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.3
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.3
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.3
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.3
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.3
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.29
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.29
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.28
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.28
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.27
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.27
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.27
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.27
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.26
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.26
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.26
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.26
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.26
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.26
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.25
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.25
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.25
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.25
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.24
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.24
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.24
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.24
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.24
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.23
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.22
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.22
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.22
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.22
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.22
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.22
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.2
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.19
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.19
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.18
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.18
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.18
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.18
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.17
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.16
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.15
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.15
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.15
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.14
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.14
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.14
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.14
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.13
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.13
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.13
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.13
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.13
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.13
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.12
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.12
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.12
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.12
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.11
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.11
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.11
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.11
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.11
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.1
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.1
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.1
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.1
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.09
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.08
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.06
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.05
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	99.04
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.03
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	99.01
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.0
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.0
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.99
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.98
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.96
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.95
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.94
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.93
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	98.92
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.92
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.91
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.9
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.87
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.85
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.83
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.8
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.8
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.78
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.74
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.74
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.72
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.71
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.7
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.7
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.68
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.68
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.66
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.65
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.63
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.62
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.6
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.6
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.58
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.55
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.51
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.5
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.49
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.48
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.47
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.47
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.47
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.46
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.45
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.45
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.82
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.43
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.8
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.42
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.41
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.4
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.4
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.4
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.39
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.37
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.36
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.36
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	98.35
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.67
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.31
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.22
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.22
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.22
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.22
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.2
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.18
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.17
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.13
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.11
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.09
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.07
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.06
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.02
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.0
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.25
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.0
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.22
1paa_A	30	Yeast transcription factor ADR1; transcription reg	97.93
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	96.96
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.63
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	95.9
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	95.03
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	94.97
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.88
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	94.78
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	93.3
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	92.69
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	90.85
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	84.53
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	81.97
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	81.36

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=9.9e-34  Score=192.12  Aligned_cols=161  Identities=43%  Similarity=0.721  Sum_probs=126.0

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCC--CCCCCCcc
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT--PGPGIDSR   79 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--~~~~~~~~   79 (175)
                      |++++.++++|.|.  .|++.|.....|..|+..|.+.++|.|..  |++.|.+...|..|++.|.++.+  |..+....
T Consensus        12 h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f   87 (190)
T 2i13_A           12 QAALEPGEKPYACP--ECGKSFSRSDHLAEHQRTHTGEKPYKCPE--CGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSF   87 (190)
T ss_dssp             ---------------------CCSSHHHHHGGGCC---CCEECTT--TCCEESSHHHHHHHHHHHHCCCCEECTTTCCEE
T ss_pred             hhhhcCCCCCCcCC--CCccccCCHHHHHHHHHHcCCCCCccCCC--cCchhCCHHHHHHHHHhcCCCCCccCcccCCcc
Confidence            67788999999998  99999999999999999999999999965  99999999999999999998765  44444444


Q ss_pred             chhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCcccc
Q psy8966          80 LIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAE  159 (175)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  159 (175)
                      .....+..|++.|.++++|.|+  .|++.|.+...|..|+++|.+++||.|  ++|++.|.....|..|+++|+++.||.
T Consensus        88 ~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~  163 (190)
T 2i13_A           88 SQRANLRAHQRTHTGEKPYACP--ECGKSFSQLAHLRAHQRTHTGEKPYKC--PECGKSFSREDNLHTHQRTHTGEKPYK  163 (190)
T ss_dssp             SCHHHHHHHHHHHHTCCCEECT--TTCCEESSHHHHHHHHHHHHCCCCEEC--TTTCCEESCHHHHHHHHHHHHCCCCEE
T ss_pred             CCHHHHHHHHHhcCCCCCCcCC--CCCCccCCHHHHHHHHHHhCCCCCeEC--CCCCcccCCHHHHHHHHHhcCCCCCeE
Confidence            4555667899999999999997  899999999999999999999999999  899999999999999999999999999


Q ss_pred             CCcchhhhccc
Q psy8966         160 VPGSILDCLSG  170 (175)
Q Consensus       160 C~~c~~~~~~~  170 (175)
                      |++|++.|.+.
T Consensus       164 C~~C~~~f~~~  174 (190)
T 2i13_A          164 CPECGKSFSRR  174 (190)
T ss_dssp             CTTTCCEESSH
T ss_pred             CCCCCCccCCH
Confidence            99999998764

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=99.97  E-value=6e-31  Score=178.40  Aligned_cols=149  Identities=49%  Similarity=0.841  Sum_probs=127.6

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCC--CCCCCCcc
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT--PGPGIDSR   79 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--~~~~~~~~   79 (175)
                      |+++|.++++|.|.  .|++.|.....|..|+..|.++++|.|..  |++.|.+...|..|++.|.++.+  |..+....
T Consensus        40 H~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  115 (190)
T 2i13_A           40 HQRTHTGEKPYKCP--ECGKSFSDKKDLTRHQRTHTGEKPYKCPE--CGKSFSQRANLRAHQRTHTGEKPYACPECGKSF  115 (190)
T ss_dssp             GGGCC---CCEECT--TTCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHTCCCEECTTTCCEE
T ss_pred             HHHHcCCCCCccCC--CcCchhCCHHHHHHHHHhcCCCCCccCcc--cCCccCCHHHHHHHHHhcCCCCCCcCCCCCCcc
Confidence            78899999999998  99999999999999999999999999965  99999999999999999998765  44444444


Q ss_pred             chhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccc
Q psy8966          80 LIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTA  158 (175)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~  158 (175)
                      .....+..|++.|.+++||.|+  .|++.|.....|..|+++|++++||.|  ++|++.|.+...|..|+++|+|+.||
T Consensus       116 ~~~~~l~~H~~~h~~~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~k~~  190 (190)
T 2i13_A          116 SQLAHLRAHQRTHTGEKPYKCP--ECGKSFSREDNLHTHQRTHTGEKPYKC--PECGKSFSRRDALNVHQRTHTGKKTS  190 (190)
T ss_dssp             SSHHHHHHHHHHHHCCCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEEC--TTTCCEESSHHHHHHHHTTC------
T ss_pred             CCHHHHHHHHHHhCCCCCeECC--CCCcccCCHHHHHHHHHhcCCCCCeEC--CCCCCccCCHHHHHHHHHhcCCCCCC
Confidence            4455567899999999999997  899999999999999999999999999  89999999999999999999999886

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.96  E-value=1.1e-29  Score=172.26  Aligned_cols=162  Identities=30%  Similarity=0.493  Sum_probs=134.0

Q ss_pred             cccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCC--CC--CCCCcc
Q psy8966           4 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT--PG--PGIDSR   79 (175)
Q Consensus         4 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~--~~--~~~~~~   79 (175)
                      .+..++++|.|.+..|+++|.....|..|++.|.++++|.|..+.|++.|.+...|..|+++|.++.+  |.  .+....
T Consensus         5 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f   84 (190)
T 1tf6_A            5 ALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRF   84 (190)
T ss_dssp             -----CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEE
T ss_pred             cccCCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCcc
Confidence            34567889999544899999999999999999999999999322399999999999999999998765  44  233344


Q ss_pred             chhcccchhh-hhc-cCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCccc--chHHHhchhhHHHHHHHhcCC
Q psy8966          80 LIVREDFVHL-RIH-SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEF--CSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus        80 ~~~~~~~~~~-~~~-~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      .....+..|+ ..| .+.++|.|+++.|++.|.+.++|..|+++|++++||.|  ++  |++.|.+...|..|+++|++ 
T Consensus        85 ~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~~~C~k~F~~~~~L~~H~~~H~~-  161 (190)
T 1tf6_A           85 TTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC--PHEGCDKRFSLPSRLKRHEKVHAG-  161 (190)
T ss_dssp             SCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBC--CSSSCCCBCSSHHHHHHHHTSSCS-
T ss_pred             CCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccC--CCCCCCchhcCHHHHHHHHHHhCC-
Confidence            4444566788 566 46789999433899999999999999999999999999  88  99999999999999999998 


Q ss_pred             ccccCCc---chhhhccc
Q psy8966         156 YTAEVPG---SILDCLSG  170 (175)
Q Consensus       156 ~~~~C~~---c~~~~~~~  170 (175)
                        |.|+.   |++.|.+.
T Consensus       162 --~~C~~~~~C~~~f~~~  177 (190)
T 1tf6_A          162 --YPCKKDDSCSFVGKTW  177 (190)
T ss_dssp             --CCCCSTTTCCCCCSCH
T ss_pred             --CcCCCCCcCCCccccH
Confidence              89999   99988764

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=5.2e-27  Score=154.01  Aligned_cols=132  Identities=34%  Similarity=0.526  Sum_probs=107.2

Q ss_pred             CCCccCCCccchhhccChHHHHHHHh---hhcCCCCeeccccc---cCcccCChHHHHHHHHHhcCCCCCCCCCCccchh
Q psy8966           9 IRPYKCPVEYCEKAFSTQYSRKAHIR---THTGEKPYRCAHEF---CSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIV   82 (175)
Q Consensus         9 ~~~~~C~~~~C~~~f~~~~~L~~h~~---~~~~~~~~~C~~~~---C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~   82 (175)
                      |.+|.|.  .|++.|.+..+|..|+.   .|.+.++|.|....   |++.|.+...|..|++.|.+              
T Consensus         1 E~~~~C~--~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~--------------   64 (155)
T 2gli_A            1 ETDCRWD--GCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTG--------------   64 (155)
T ss_dssp             CCBCCBT--TCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHC--------------
T ss_pred             CCcCCcC--CCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCC--------------
Confidence            3567786  99999999999999998   67788889885312   35899999999999888765              


Q ss_pred             cccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCccc--chHHHhchhhHHHHH-HHhcCCcccc
Q psy8966          83 REDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEF--CSKSFKTSGDLQKHV-RTHTGKYTAE  159 (175)
Q Consensus        83 ~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~-~~h~~~~~~~  159 (175)
                                  ++||.|+++.|++.|.+...|..|+++|.++++|.|  ++  |++.|.+...|..|+ ++|+++.||.
T Consensus        65 ------------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~  130 (155)
T 2gli_A           65 ------------EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMC--EHEGCSKAFSNASDRAKHQNRTHSNEKPYV  130 (155)
T ss_dssp             ------------CCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEEC--CSTTCCCEESSSSTTHHHHHHTTCSCCCEE
T ss_pred             ------------CCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeC--CCCCCCCccCCHHHHHHHHHHhcCCCCCee
Confidence                        557788633588888888888888888888888888  76  888888888888888 6788888888


Q ss_pred             CCc--chhhhccc
Q psy8966         160 VPG--SILDCLSG  170 (175)
Q Consensus       160 C~~--c~~~~~~~  170 (175)
                      |++  |++.|.+.
T Consensus       131 C~~~~C~~~f~~~  143 (155)
T 2gli_A          131 CKLPGCTKRYTDP  143 (155)
T ss_dssp             CCSTTTCCEESSH
T ss_pred             CCCCCCccccCCH
Confidence            877  88887654

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.94  E-value=1.8e-26  Score=146.11  Aligned_cols=120  Identities=38%  Similarity=0.790  Sum_probs=102.3

Q ss_pred             CCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccch
Q psy8966           8 GIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFV   87 (175)
Q Consensus         8 ~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~   87 (175)
                      ++++|.|.+..|+++|.+...|..|+.+| +.++|.|..  |++.|.+...|..|+++|.+                   
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~-------------------   59 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAE--CGKAFVESSKLKRHQLVHTG-------------------   59 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTT--TCCEESSHHHHHHHGGGTSC-------------------
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCC--CCchhCCHHHHHHHHHHcCC-------------------
Confidence            45789997557999999999999999998 788999965  99999999999999777654                   


Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCccc--chHHHhchhhHHHHHHHhcCCccc
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEF--CSKSFKTSGDLQKHVRTHTGKYTA  158 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~  158 (175)
                             +++|.|+++.|++.|.....|..|+++|.++++|.|  +.  |++.|.+...|..|+++|++++++
T Consensus        60 -------~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           60 -------EKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVC--PFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             -------CCCEECCSTTCCCEESCHHHHHHHHHHHHCCCCCCC--CSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             -------CCCeeCCCCCCcCccCCHHHHHHHHHHhCCCCceEC--CCCCCCCccCCHHHHHHHHHHHcccccC
Confidence                   678999744699999999999999999999999999  74  999999999999999999998765

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.94  E-value=9.3e-27  Score=157.71  Aligned_cols=149  Identities=34%  Similarity=0.503  Sum_probs=124.1

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHH-HHhc-CCCC--C--CCC
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHT-GKYT--P--GPG   75 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~-~~~~--~--~~~   75 (175)
                      |+++|+++++|.|.+..|++.|.....|..|+++|.++++|.|..+.|++.|.+...|..|+ ..|. +..+  |  ..+
T Consensus        33 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C  112 (190)
T 1tf6_A           33 HLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENC  112 (190)
T ss_dssp             HHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSS
T ss_pred             HHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCC
Confidence            78899999999994338999999999999999999999999996115999999999999999 5552 3333  3  334


Q ss_pred             CCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCccc---chHHHhchhhHHHHHHHh
Q psy8966          76 IDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEF---CSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~---C~~~f~~~~~l~~H~~~h  152 (175)
                      .........+..|++.|.+++||.|+.+.|++.|...++|..|+++|++   |.|  ++   |++.|.+...|..|+++|
T Consensus       113 ~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H~~~H~~---~~C--~~~~~C~~~f~~~~~l~~H~~~h  187 (190)
T 1tf6_A          113 GKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPC--KKDDSCSFVGKTWTLYLKHVAEC  187 (190)
T ss_dssp             CEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHHHTSSCS---CCC--CSTTTCCCCCSCHHHHHHHHTTC
T ss_pred             ccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHHHHHhCC---CcC--CCCCcCCCccccHHHHHHHHHhh
Confidence            4444445556779999999999999722399999999999999999987   899  88   999999999999999999


Q ss_pred             cCC
Q psy8966         153 TGK  155 (175)
Q Consensus       153 ~~~  155 (175)
                      +++
T Consensus       188 ~~e  190 (190)
T 1tf6_A          188 HQD  190 (190)
T ss_dssp             C--
T ss_pred             cCC
Confidence            875

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.93  E-value=4.6e-26  Score=149.53  Aligned_cols=126  Identities=37%  Similarity=0.686  Sum_probs=111.3

Q ss_pred             ccCCCCCccCCCccchhhccChHHHHHHHhh-hcCCCC--------eeccccccCcccCChHHHHHHHHHhcCCCCCCCC
Q psy8966           5 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT-HTGEKP--------YRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPG   75 (175)
Q Consensus         5 ~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~-~~~~~~--------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~   75 (175)
                      ++.++.+|.|.  .|++.|....+|..|+.. |.+..+        |.|..  |++.|.+...|..|+++|.+       
T Consensus        19 ~~~~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~-------   87 (155)
T 2rpc_A           19 IDEAQLSRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPR--EGKSFKAKYKLVNHIRVHTG-------   87 (155)
T ss_dssp             CCTTCCSSSCC--CCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTT--SSCCCSSHHHHHHHTHHHHC-------
T ss_pred             echhhcccccc--cCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCC--cccccCCHHHHHHHHHhcCC-------
Confidence            34566778997  999999999999999997 766544        78955  99999999999999887765       


Q ss_pred             CCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCccc--chHHHhchhhHHHHHHHhc
Q psy8966          76 IDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEF--CSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~  153 (175)
                                         +++|.|+.+.|++.|.....|..|+++|+++++|.|  ++  |++.|.....|..|+++|+
T Consensus        88 -------------------~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C--~~~~C~k~f~~~~~L~~H~~~H~  146 (155)
T 2rpc_A           88 -------------------EKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKC--EFEGCDRRFANSSDRKKHMHVHT  146 (155)
T ss_dssp             -------------------CCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCC--SSTTCCCCBSSHHHHHHSSTTTT
T ss_pred             -------------------CCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccC--CCCCCCCccCCHHHHHHHHHHhc
Confidence                               678999733499999999999999999999999999  86  9999999999999999999


Q ss_pred             CCccccCCc
Q psy8966         154 GKYTAEVPG  162 (175)
Q Consensus       154 ~~~~~~C~~  162 (175)
                      +++||.|..
T Consensus       147 ~~k~~~c~g  155 (155)
T 2rpc_A          147 SDKSGPSSG  155 (155)
T ss_dssp             SCCCSCSCC
T ss_pred             CCCCCCCCC
Confidence            999999964

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=2.8e-25  Score=140.46  Aligned_cols=120  Identities=35%  Similarity=0.738  Sum_probs=108.4

Q ss_pred             cCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhccc
Q psy8966           6 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVRED   85 (175)
Q Consensus         6 ~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~   85 (175)
                      .+++++|.|.  .|++.|.....|..|++.|.++++|.|..  |++.|.+...|..|+..+..                 
T Consensus         2 s~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~-----------------   60 (124)
T 2dlq_A            2 SSGSSGVECP--TCHKKFLSKYYLKVHNRKHTGEKPFECPK--CGKCYFRKENLLEHEARNCM-----------------   60 (124)
T ss_dssp             CCCCSSCCCT--TTCCCCSSHHHHHHHHHHHSSCCSCBCTT--TCCBCSSHHHHHHHHHHCCC-----------------
T ss_pred             CCCCCCCCCC--CCCCcCCCHHHHHHHHHhCCCCCCeECCC--CCchhcCHHHHHHHHhhhhc-----------------
Confidence            3678899998  99999999999999999999999999965  99999999999999887532                 


Q ss_pred             chhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHH-HhcCCc
Q psy8966          86 FVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTGKY  156 (175)
Q Consensus        86 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~  156 (175)
                            +.++++|.|+  .|++.|.....|..|+++|.+++||.|  ++|++.|.+...|..|++ +|.++.
T Consensus        61 ------~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           61 ------NRSEQVFTCS--VCQETFRRRMELRLHMVSHTGEMPYKC--SSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             ------CSCCCCEECS--SSCCEESSHHHHHHHHHHHSSSCSEEC--SSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             ------CCCCCCeECC--CCCCccCCHHHHHHHHHHcCCCCCccC--CCccchhCCHHHHHHHHHHHCCCCC
Confidence                  3457789997  899999999999999999999999999  899999999999999998 576653

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.92  E-value=4.1e-25  Score=138.77  Aligned_cols=118  Identities=41%  Similarity=0.828  Sum_probs=104.8

Q ss_pred             CCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccc
Q psy8966           7 SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDF   86 (175)
Q Consensus         7 ~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~   86 (175)
                      +++++|.|.+..|++.|.....|..|++.|.+.++|.|....|++.|.+...|..|++.|.+                  
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------------   63 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTG------------------   63 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHC------------------
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHHcCC------------------
Confidence            57889999722499999999999999999999999999622599999999999999888765                  


Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHh
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h  152 (175)
                              +++|.|+  .|++.|.....|..|+++|+++++|.|..++|++.|.+...|..|+++|
T Consensus        64 --------~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           64 --------VKPFQCK--TCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             --------CCCEECT--TTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             --------CCCccCC--ccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence                    5689997  8999999999999999999999999992225999999999999999986

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.92  E-value=4.7e-25  Score=144.65  Aligned_cols=122  Identities=43%  Similarity=0.811  Sum_probs=107.9

Q ss_pred             ccCCCCCccCC---CccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccch
Q psy8966           5 IHSGIRPYKCP---VEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLI   81 (175)
Q Consensus         5 ~~~~~~~~~C~---~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~   81 (175)
                      +|.++++|.|.   +..|++.|.....|..|+..|.++++|.|..+.|++.|.+...|..|+++|.+             
T Consensus        28 ~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-------------   94 (155)
T 2gli_A           28 IHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTG-------------   94 (155)
T ss_dssp             SSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCSSHHHHHHHHHHTTT-------------
T ss_pred             cCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCcccCHHHHHHHHHHcCC-------------
Confidence            78899999996   23446999999999999999999999999522499999999999999888765             


Q ss_pred             hcccchhhhhccCCcceeccCCCcccccCCHHHHHHHH-hhhcCCCcccCCccc--chHHHhchhhHHHHHHHhcC
Q psy8966          82 VREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEKPYRCAHEF--CSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~  154 (175)
                                   +++|.|+.+.|++.|.+.++|..|+ ++|.+++||.|  ++  |++.|.+...|..|+++|+|
T Consensus        95 -------------~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C--~~~~C~~~f~~~~~L~~H~~~hhg  155 (155)
T 2gli_A           95 -------------EKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVC--KLPGCTKRYTDPSSLRKHVKTVHG  155 (155)
T ss_dssp             -------------CCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEEC--CSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             -------------CCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeC--CCCCCccccCCHHHHHHHHHhhcC
Confidence                         6789997223999999999999998 89999999999  88  99999999999999999876

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=1.1e-25  Score=143.73  Aligned_cols=59  Identities=31%  Similarity=0.501  Sum_probs=29.0

Q ss_pred             cccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHh
Q psy8966           4 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH   66 (175)
Q Consensus         4 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   66 (175)
                      ++|.|+++|.|.  .||++|....+|..|+++|.++++|.|..  |++.|.+...|..|+++|
T Consensus        15 ~~h~Gek~y~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~H   73 (133)
T 2lt7_A           15 LIVDGRVYYICI--VCKRSYVCLTSLRRHFNIHSWEKKYPCRY--CEKVFPLAEYRTKHEIHH   73 (133)
T ss_dssp             EEETTEEEEEET--TTCCEESCHHHHHHHHHHHHCCSCEECSS--SSCEESSHHHHHHHHHHH
T ss_pred             eecCCCcCeECC--CCCCCcCCHHHHHHHHHHcCCCCCeeCCc--cCeecccccchhhhcccc
Confidence            344455555554  45555555555555555555555555532  555555555444444443

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=1.1e-24  Score=139.08  Aligned_cols=106  Identities=26%  Similarity=0.457  Sum_probs=95.1

Q ss_pred             HhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCH
Q psy8966          33 IRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQ  112 (175)
Q Consensus        33 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~  112 (175)
                      ..++.|+++|.|..  |++.|.+...|..|+++|.+                          ++||.|+  .|++.|...
T Consensus        14 ~~~h~Gek~y~C~~--C~k~F~~~~~L~~H~~~H~~--------------------------~k~~~C~--~C~k~F~~~   63 (133)
T 2lt7_A           14 ELIVDGRVYYICIV--CKRSYVCLTSLRRHFNIHSW--------------------------EKKYPCR--YCEKVFPLA   63 (133)
T ss_dssp             EEEETTEEEEEETT--TCCEESCHHHHHHHHHHHHC--------------------------CSCEECS--SSSCEESSH
T ss_pred             eeecCCCcCeECCC--CCCCcCCHHHHHHHHHHcCC--------------------------CCCeeCC--ccCeecccc
Confidence            34678899999955  99999999999999888765                          6789997  899999999


Q ss_pred             HHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC------ccccCCcchhhhccc
Q psy8966         113 YSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK------YTAEVPGSILDCLSG  170 (175)
Q Consensus       113 ~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~------~~~~C~~c~~~~~~~  170 (175)
                      +.|..|+++|++++||.|  ++|++.|..+..|..|+++|+++      .+|.|..|+..|+..
T Consensus        64 ~~L~~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           64 EYRTKHEIHHTGERRYQC--LACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             HHHHHHHHHHHTCCCEEE--SSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             cchhhhccccCCCccccC--CCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            999999999999999999  89999999999999999998876      458899999877654

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.89  E-value=1.3e-23  Score=131.81  Aligned_cols=106  Identities=37%  Similarity=0.710  Sum_probs=95.4

Q ss_pred             cCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHH
Q psy8966          37 TGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRK  116 (175)
Q Consensus        37 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~  116 (175)
                      .++++|.|..+.|++.|.+...|..|++.|.+                          +++|.|++..|++.|.+...|.
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--------------------------~~~~~C~~~~C~~~f~~~~~l~   55 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTG--------------------------EKPYQCDFKDCERRFSRSDQLK   55 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHT--------------------------TCCEECCSTTCCCEESSHHHHH
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCC--------------------------CCCccCCCCCCcCccCCHHHHH
Confidence            45678999533499999999999999888765                          5689996447999999999999


Q ss_pred             HHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC--Ccchhhhccc
Q psy8966         117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV--PGSILDCLSG  170 (175)
Q Consensus       117 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~c~~~~~~~  170 (175)
                      .|+++|.++++|.|  ++|++.|.....|..|+++|+++.+|.|  +.||+.|.+.
T Consensus        56 ~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  109 (119)
T 2jp9_A           56 RHQRRHTGVKPFQC--KTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARS  109 (119)
T ss_dssp             HHHHHHHCCCCEEC--TTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSH
T ss_pred             HHHHHcCCCCCccC--CccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCH
Confidence            99999999999999  8999999999999999999999999999  8999998764

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=2.8e-22  Score=126.56  Aligned_cols=102  Identities=25%  Similarity=0.570  Sum_probs=92.4

Q ss_pred             cCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHH
Q psy8966          37 TGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRK  116 (175)
Q Consensus        37 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~  116 (175)
                      .+..+|.|..  |++.|.+...|..|++.|.+                          +++|.|+  .|++.|.+...|.
T Consensus         3 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~--------------------------~~~~~C~--~C~~~f~~~~~l~   52 (124)
T 2dlq_A            3 SGSSGVECPT--CHKKFLSKYYLKVHNRKHTG--------------------------EKPFECP--KCGKCYFRKENLL   52 (124)
T ss_dssp             CCCSSCCCTT--TCCCCSSHHHHHHHHHHHSS--------------------------CCSCBCT--TTCCBCSSHHHHH
T ss_pred             CCCCCCCCCC--CCCcCCCHHHHHHHHHhCCC--------------------------CCCeECC--CCCchhcCHHHHH
Confidence            4567899965  99999999999999888765                          5689997  8999999999999


Q ss_pred             HHHhh---hcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchhhhccc
Q psy8966         117 AHIRT---HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCLSG  170 (175)
Q Consensus       117 ~H~~~---h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~~~~~~  170 (175)
                      .|+..   +.++++|.|  ++|++.|.....|..|+++|+++.||.|++|++.|.+.
T Consensus        53 ~H~~~~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  107 (124)
T 2dlq_A           53 EHEARNCMNRSEQVFTC--SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQK  107 (124)
T ss_dssp             HHHHHCCCCSCCCCEEC--SSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSH
T ss_pred             HHHhhhhcCCCCCCeEC--CCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCH
Confidence            99985   577899999  88999999999999999999999999999999998764

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.85  E-value=1.5e-21  Score=123.30  Aligned_cols=102  Identities=37%  Similarity=0.685  Sum_probs=90.2

Q ss_pred             CCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHH
Q psy8966          39 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAH  118 (175)
Q Consensus        39 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H  118 (175)
                      .++|.|+.+.|++.|.+...|..|+++| +                          +++|.|+  .|++.|.+...|..|
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~--------------------------~~~~~C~--~C~~~f~~~~~l~~H   53 (124)
T 1ubd_C            3 PRTIACPHKGCTKMFRDNSAMRKHLHTH-G--------------------------PRVHVCA--ECGKAFVESSKLKRH   53 (124)
T ss_dssp             --CEECCSTTCCCEESSHHHHHHHHGGG-S--------------------------CCCEECT--TTCCEESSHHHHHHH
T ss_pred             CCcccCCCCCCcCccCCHHHHHHHHHHc-C--------------------------CCCeECC--CCCchhCCHHHHHHH
Confidence            4679996225999999999999998876 3                          5689997  899999999999999


Q ss_pred             HhhhcCCCcccCCccc--chHHHhchhhHHHHHHHhcCCccccCC--cchhhhcccc
Q psy8966         119 IRTHTGEKPYRCAHEF--CSKSFKTSGDLQKHVRTHTGKYTAEVP--GSILDCLSGR  171 (175)
Q Consensus       119 ~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~--~c~~~~~~~~  171 (175)
                      +.+|.++++|.|  ++  |++.|.....|..|+++|+++.+|.|+  .|++.|.+..
T Consensus        54 ~~~h~~~~~~~C--~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~  108 (124)
T 1ubd_C           54 QLVHTGEKPFQC--TFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQST  108 (124)
T ss_dssp             GGGTSCCCCEEC--CSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTT
T ss_pred             HHHcCCCCCeeC--CCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHH
Confidence            999999999999  75  999999999999999999999999996  5999987753

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=3.7e-20  Score=113.75  Aligned_cols=91  Identities=36%  Similarity=0.658  Sum_probs=73.7

Q ss_pred             CCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHH
Q psy8966          38 GEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKA  117 (175)
Q Consensus        38 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~  117 (175)
                      .+++|.|..  |++.|.+...|..|++.|.+                          +++|.|+  .|++.|.....|..
T Consensus        14 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~--------------------------~~~~~C~--~C~~~f~~~~~l~~   63 (106)
T 2ee8_A           14 TKKEFICKF--CGRHFTKSYNLLIHERTHTD--------------------------ERPYTCD--ICHKAFRRQDHLRD   63 (106)
T ss_dssp             CCCCCBCSS--SCCBCSSHHHHHHHHHHHCC--------------------------SCCCBCS--SSCCBCSCHHHHHH
T ss_pred             CCcCeECCC--CCCccCCHHHHHHHHHHcCC--------------------------CCCcCCC--CccchhCCHHHHHH
Confidence            455688854  88888888888888777654                          5678886  78888888888888


Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV  160 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  160 (175)
                      |+++|.++++|.|  ++|++.|.....|..|+++|+++.||.+
T Consensus        64 H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           64 HRYIHSKEKPFKC--QECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             HGGGSCCCCTTSC--SSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             HHHHhCCCCCeEC--CCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            8888888888888  7888888888888888888888888765

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.82  E-value=2.1e-20  Score=111.47  Aligned_cols=88  Identities=41%  Similarity=0.927  Sum_probs=58.2

Q ss_pred             CCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHH
Q psy8966          39 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAH  118 (175)
Q Consensus        39 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H  118 (175)
                      +++|.|+.+.|++.|.+...|..|++.|.+                          +++|.|+  .|++.|.....|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~--------------------------~~~~~C~--~C~~~f~~~~~l~~H   53 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTG--------------------------QKPFQCR--ICMRNFSRSDHLTTH   53 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHC--------------------------CCCEECT--TTCCEESCHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCC--------------------------CCCccCC--CCCcccCCHHHHHHH
Confidence            345666422377777777777777666543                          4566775  677777777777777


Q ss_pred             HhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCc
Q psy8966         119 IRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY  156 (175)
Q Consensus       119 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  156 (175)
                      +.+|.++++|.|  ++|++.|.....|..|+++|++++
T Consensus        54 ~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           54 IRTHTGEKPFAC--DICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             HHHHHCCCCEEC--TTTCCEESSHHHHHHHHGGGGC--
T ss_pred             HHHcCCCCCccC--CCCCchhCCHHHHHHHHHHhcccC
Confidence            777777777777  667777777777777777777653

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.80  E-value=3.4e-20  Score=107.94  Aligned_cols=73  Identities=25%  Similarity=0.394  Sum_probs=68.8

Q ss_pred             cCCcceeccCCCcccccCCHHHHHHHHh-hhcCCCcccCCccc--chHHHhchhhHHHHHHHhcCCccccCCcchhhh
Q psy8966          93 SGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRCAHEF--CSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDC  167 (175)
Q Consensus        93 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~~~  167 (175)
                      +++++|.|.++.|++.|.....|..|++ +|.++++|.|  ++  |++.|..+..|.+|+++|+++.||.|++||++|
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C--~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F   78 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSC--PEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSS   78 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEEC--SCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeEC--CCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCC
Confidence            4578999987779999999999999999 7999999999  88  999999999999999999999999999999887

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.80  E-value=2e-19  Score=107.19  Aligned_cols=90  Identities=43%  Similarity=0.882  Sum_probs=78.3

Q ss_pred             CCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccch
Q psy8966           8 GIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFV   87 (175)
Q Consensus         8 ~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~   87 (175)
                      +++||.|.+..|++.|.....|..|+++|.+.++|.|..  |++.|.+...|..|+++|.+                   
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~-------------------   59 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHTG-------------------   59 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHHHHHC-------------------
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCC--CCcccCCHHHHHHHHHHcCC-------------------
Confidence            468999974469999999999999999999999999965  99999999999999888765                   


Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCc
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP  127 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  127 (175)
                             +++|.|+  .|++.|...+.|..|+++|+++++
T Consensus        60 -------~~~~~C~--~C~~~f~~~~~l~~H~~~H~~~k~   90 (90)
T 1a1h_A           60 -------EKPFACD--ICGRKFARSDERKRHTKIHLRQKD   90 (90)
T ss_dssp             -------CCCEECT--TTCCEESSHHHHHHHHGGGGC---
T ss_pred             -------CCCccCC--CCCchhCCHHHHHHHHHHhcccCC
Confidence                   6789997  899999999999999999998763

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.80  E-value=5.3e-20  Score=120.50  Aligned_cols=109  Identities=32%  Similarity=0.502  Sum_probs=91.8

Q ss_pred             CCCCeeccccccCcccCChHHHHHHHHH-hcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHH
Q psy8966          38 GEKPYRCAHEFCSKSFKTSGDLQKHVRT-HTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRK  116 (175)
Q Consensus        38 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~  116 (175)
                      +...|.|..  |++.|.+...|..|++. |.+..+..                  .....+|.|+  .|++.|.....|.
T Consensus        22 ~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~~~~~~~------------------~~~~~~~~C~--~C~~~f~~~~~l~   79 (155)
T 2rpc_A           22 AQLSRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQN------------------NHVCYWEECP--REGKSFKAKYKLV   79 (155)
T ss_dssp             TCCSSSCCC--CCCCBSSHHHHHHHHHTTTSCCTTCS------------------SCCCCBTTCT--TSSCCCSSHHHHH
T ss_pred             hhccccccc--CCcccCCHHHHHHHHHhhcCCCcccC------------------CccccccCCC--CcccccCCHHHHH
Confidence            456799955  99999999999999997 55432110                  0012347886  8999999999999


Q ss_pred             HHHhhhcCCCcccCCccc--chHHHhchhhHHHHHHHhcCCccccCCc--chhhhccc
Q psy8966         117 AHIRTHTGEKPYRCAHEF--CSKSFKTSGDLQKHVRTHTGKYTAEVPG--SILDCLSG  170 (175)
Q Consensus       117 ~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--c~~~~~~~  170 (175)
                      .|+++|.++++|.|  .+  |++.|.....|.+|+++|+++.||.|++  |++.|.+.
T Consensus        80 ~H~~~h~~~~~~~C--~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~  135 (155)
T 2rpc_A           80 NHIRVHTGEKPFPC--PFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANS  135 (155)
T ss_dssp             HHTHHHHCCCSEEC--SCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSH
T ss_pred             HHHHhcCCCCcccC--CcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCH
Confidence            99999999999999  87  9999999999999999999999999997  99998764

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=7.6e-20  Score=110.34  Aligned_cols=58  Identities=36%  Similarity=0.842  Sum_probs=34.8

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCc
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY  156 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  156 (175)
                      +++|.|+  .|++.|.....|..|+++|.++++|.|  ++|++.|.....|..|+++|+++.
T Consensus        34 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           34 VKPYKCK--TCDYAAADSSSLNKHLRIHSDERPFKC--QICPYASRNSSQLTVHLRSHTGDS   91 (96)
T ss_dssp             CCSEECS--SSCCEESSHHHHHHHHHHSCCCCCEEC--SSSSCEESSHHHHHHHHTTCCSCC
T ss_pred             CCCEeCC--CCCCccCCHHHHHHHHHHhCCCCCccC--CCCCCccCCHHHHHHHHHHhcCCC
Confidence            3455554  566666666666666666666666666  556666666666666666666553

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=3.8e-20  Score=113.93  Aligned_cols=94  Identities=22%  Similarity=0.423  Sum_probs=64.1

Q ss_pred             hhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHH
Q psy8966          34 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQY  113 (175)
Q Consensus        34 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~  113 (175)
                      +.|.++++|.|..  |++.|.+...|..|++.|.                            ++|.|+  .|++.|....
T Consensus         9 ~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~H~----------------------------~~~~C~--~C~~~f~~~~   56 (107)
T 1wjp_A            9 SPVENKEVYQCRL--CNAKLSSLLEQGSHERLCR----------------------------NAAVCP--YCSLRFFSPE   56 (107)
T ss_dssp             CCCCCCCCCBCTT--TCCBCSSHHHHHHHHHHHH----------------------------HSBCCT--TTCCCBSSHH
T ss_pred             cccCCCcCeECCC--CCCccCCHHHHHHHHHHCC----------------------------CCccCC--CCCCccCCHH
Confidence            3455666677743  7777777777776666542                            256675  6777777777


Q ss_pred             HHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHH-HhcCCccccCCc
Q psy8966         114 SRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTGKYTAEVPG  162 (175)
Q Consensus       114 ~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  162 (175)
                      .|..|+. |.+++||.|  ++|++.|.....|..|++ +|+++.+|.+..
T Consensus        57 ~l~~H~~-H~~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~  103 (107)
T 1wjp_A           57 LKQEHES-KCEYKKLTC--LECMRTFKSSFSIWRHQVEVHNQNNMAPTSG  103 (107)
T ss_dssp             HHHHHHH-HCSTGGGEE--GGGTEECSSHHHHHHHHHHTSCCCCCCCCCC
T ss_pred             HHHHHHH-cCCCCCccC--ccccchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            7777774 777777777  777777777777777776 677777776653

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.80  E-value=2.4e-20  Score=102.25  Aligned_cols=58  Identities=29%  Similarity=0.721  Sum_probs=55.4

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCc
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY  156 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  156 (175)
                      |+||.|.  .|++.|...+.|..|+++|++++||.|  ++||++|...+.|.+|+++|+|+.
T Consensus         2 EKpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C--~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCN--FCGKTYRDASGLSRHRRAHLGYRPRSC--PECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHHHHHTCCCEEC--TTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCC--CCCCEeCCHHHHHHHHHHhCCCcCeEC--CCCCCCcCCHHHHHHHhCccCCCC
Confidence            7899997  899999999999999999999999999  899999999999999999999974

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.80  E-value=1.6e-19  Score=105.75  Aligned_cols=82  Identities=45%  Similarity=0.895  Sum_probs=74.9

Q ss_pred             CeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHh
Q psy8966          41 PYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR  120 (175)
Q Consensus        41 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~  120 (175)
                      +|.|..  |++.|.+...|..|++.|.+                          +++|.|+  .|++.|.....|..|++
T Consensus         1 ~~~C~~--C~~~f~~~~~l~~H~~~h~~--------------------------~~~~~C~--~C~~~f~~~~~l~~H~~   50 (82)
T 2kmk_A            1 SFDCKI--CGKSFKRSSTLSTHLLIHSD--------------------------TRPYPCQ--YCGKRFHQKSDMKKHTF   50 (82)
T ss_dssp             CEECSS--SCCEESSHHHHHHHHHHHHT--------------------------CCCEECS--SSCCEESSHHHHHHHHH
T ss_pred             CccCCC--CcccccCchhHHHHHHHcCC--------------------------CCCeeCC--cCChhhCCHHHHHHHHH
Confidence            588955  99999999999999888765                          5689997  89999999999999999


Q ss_pred             hhcCCCcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      +|.++++|.|  ++|++.|.....|..|+++|+|
T Consensus        51 ~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           51 IHTGEKPHKC--QVCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             HHHTCCCEEC--TTTSCEESSHHHHHHHHHHHC-
T ss_pred             HhcCCCCCcC--CCcchhhCChHHHHHHHHhhCC
Confidence            9999999999  8899999999999999999975

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.79  E-value=2.9e-21  Score=120.48  Aligned_cols=106  Identities=24%  Similarity=0.329  Sum_probs=79.7

Q ss_pred             HHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcc-eeccCCCc
Q psy8966          27 YSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRP-YKCPVEYC  105 (175)
Q Consensus        27 ~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~C~~~~C  105 (175)
                      ..|..|+++|.++++|.|..  |++.|.+...|..|++. ++                       +.+.++ +.|+  .|
T Consensus         5 ~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~-~~-----------------------h~~~~~~~~C~--~C   56 (115)
T 2dmi_A            5 SSGKLYGSIFTGASKFRCKD--CSAAYDTLVELTVHMNE-TG-----------------------HYRDDNHETDN--NN   56 (115)
T ss_dssp             CCCCCCCCCCCCCCSEEBSS--SSCEESSHHHHHHHHHH-TC-----------------------CCBCSCCCCCC--CC
T ss_pred             hhhhhheeeeCCCCCEECCc--cCchhcCHHHHHHHHHH-hC-----------------------ccccCCCccCC--CC
Confidence            45666777788888888854  88888888888888776 21                       111233 3475  78


Q ss_pred             cccc--CCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCc
Q psy8966         106 EKAF--STQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPG  162 (175)
Q Consensus       106 ~~~f--~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  162 (175)
                      ++.|  .....|..|+++|.+++||.|  ++|++.|.....|..|+++|+.......+.
T Consensus        57 ~~~f~f~~~~~l~~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~hh~~~~~~~~~  113 (115)
T 2dmi_A           57 PKRWSKPRKRSLLEMEGKEDAQKVLKC--MYCGHSFESLQDLSVHMIKTKHYQKVSGPS  113 (115)
T ss_dssp             CSCCSSCCCCCCCCCCCSCCCCSSCBC--SSSCCBCSSHHHHHHHHHHTTTTTCSCCCC
T ss_pred             CcccccccHHHHHHHhhccCCCcceEC--CCCCCccCCHHHHHHHHHHhCCcccCCCCC
Confidence            8888  788888888888888899999  889999999999999998887765555543

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.79  E-value=8.3e-19  Score=107.64  Aligned_cols=93  Identities=29%  Similarity=0.646  Sum_probs=84.3

Q ss_pred             cCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhccc
Q psy8966           6 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVRED   85 (175)
Q Consensus         6 ~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~   85 (175)
                      ..++++|.|.  .|++.|.....|..|++.|.+.++|.|..  |++.|.....|..|++.|.+                 
T Consensus        12 ~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~-----------------   70 (106)
T 2ee8_A           12 SKTKKEFICK--FCGRHFTKSYNLLIHERTHTDERPYTCDI--CHKAFRRQDHLRDHRYIHSK-----------------   70 (106)
T ss_dssp             CCCCCCCBCS--SSCCBCSSHHHHHHHHHHHCCSCCCBCSS--SCCBCSCHHHHHHHGGGSCC-----------------
T ss_pred             cCCCcCeECC--CCCCccCCHHHHHHHHHHcCCCCCcCCCC--ccchhCCHHHHHHHHHHhCC-----------------
Confidence            4467789998  99999999999999999999999999965  99999999999999776654                 


Q ss_pred             chhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          86 FVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        86 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                               +++|.|+  .|++.|.....|..|+++|.+++||.+
T Consensus        71 ---------~~~~~C~--~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           71 ---------EKPFKCQ--ECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             ---------CCTTSCS--SSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             ---------CCCeECC--CcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence                     6789997  899999999999999999999999875

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=8.1e-19  Score=105.78  Aligned_cols=91  Identities=38%  Similarity=0.733  Sum_probs=83.2

Q ss_pred             ccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcc
Q psy8966           5 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVRE   84 (175)
Q Consensus         5 ~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~   84 (175)
                      ++.++++|.|.  .|++.|.....|..|++.|.+.++|.|..  |++.|.....|..|+++|.+                
T Consensus         2 s~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~----------------   61 (96)
T 2dmd_A            2 SSGSSGPHKCE--VCGKCFSRKDKLKTHMRCHTGVKPYKCKT--CDYAAADSSSLNKHLRIHSD----------------   61 (96)
T ss_dssp             CCCCCCCCCBT--TTTBCCCCHHHHHHHGGGCCCCCSEECSS--SCCEESSHHHHHHHHHHSCC----------------
T ss_pred             CCCCCcCeECC--CCCCccCCHHHHHHHHHhcCCCCCEeCCC--CCCccCCHHHHHHHHHHhCC----------------
Confidence            46788999998  99999999999999999999999999965  99999999999999887654                


Q ss_pred             cchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCc
Q psy8966          85 DFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP  127 (175)
Q Consensus        85 ~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  127 (175)
                                +++|.|+  .|++.|....+|..|+++|+++++
T Consensus        62 ----------~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~   92 (96)
T 2dmd_A           62 ----------ERPFKCQ--ICPYASRNSSQLTVHLRSHTGDSG   92 (96)
T ss_dssp             ----------CCCEECS--SSSCEESSHHHHHHHHTTCCSCCC
T ss_pred             ----------CCCccCC--CCCCccCCHHHHHHHHHHhcCCCC
Confidence                      6789997  899999999999999999998875

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.78  E-value=4.5e-19  Score=109.08  Aligned_cols=94  Identities=19%  Similarity=0.319  Sum_probs=85.3

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccch
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLI   81 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~   81 (175)
                      ++++|+++++|.|.  .|++.|.....|..|+++|.  ++|.|..  |++.|.....|..|+. |.+             
T Consensus         7 ~~~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~H~--~~~~C~~--C~~~f~~~~~l~~H~~-H~~-------------   66 (107)
T 1wjp_A            7 GASPVENKEVYQCR--LCNAKLSSLLEQGSHERLCR--NAAVCPY--CSLRFFSPELKQEHES-KCE-------------   66 (107)
T ss_dssp             CCCCCCCCCCCBCT--TTCCBCSSHHHHHHHHHHHH--HSBCCTT--TCCCBSSHHHHHHHHH-HCS-------------
T ss_pred             cCcccCCCcCeECC--CCCCccCCHHHHHHHHHHCC--CCccCCC--CCCccCCHHHHHHHHH-cCC-------------
Confidence            57889999999998  99999999999999999984  5799955  9999999999999974 654             


Q ss_pred             hcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHh-hhcCCCcccC
Q psy8966          82 VREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRC  130 (175)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C  130 (175)
                                   ++||.|+  .|++.|.....|..|++ +|.++++|.+
T Consensus        67 -------------~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~~~~~~  101 (107)
T 1wjp_A           67 -------------YKKLTCL--ECMRTFKSSFSIWRHQVEVHNQNNMAPT  101 (107)
T ss_dssp             -------------TGGGEEG--GGTEECSSHHHHHHHHHHTSCCCCCCCC
T ss_pred             -------------CCCccCc--cccchhCCHHHHHHHHHHHcCCCCCCCC
Confidence                         6789997  89999999999999997 9999999988

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.78  E-value=8.3e-19  Score=106.48  Aligned_cols=88  Identities=38%  Similarity=0.747  Sum_probs=67.3

Q ss_pred             CCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHH
Q psy8966          39 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAH  118 (175)
Q Consensus        39 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H  118 (175)
                      .++|.|....|++.|.....|..|++.|.+                          +++|.|+++.|++.|.....|..|
T Consensus        13 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--------------------------~~~~~C~~~~C~~~f~~~~~l~~H   66 (100)
T 2ebt_A           13 RRIHYCDYPGCTKVYTKSSHLKAHLRTHTG--------------------------EKPYKCTWEGCDWRFARSDELTRH   66 (100)
T ss_dssp             CCCEECCSSSCCCEESCHHHHHHHHHHHSC--------------------------CCCEECCSSSCCCEESSHHHHHHH
T ss_pred             CcceEcCCCCCCCcccCHHHHHHHHHHhCC--------------------------CCCeeCCCCCCCCccCCHHHHHHH
Confidence            345777433488888888888888776654                          557788544688888888888888


Q ss_pred             HhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         119 IRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       119 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      +++|.++++|.|  ++|++.|.....|..|+++|++
T Consensus        67 ~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           67 YRKHTGAKPFQC--GVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             HHHHTSCCSCBC--SSSCCBCSSHHHHHHHHHHHCC
T ss_pred             HHHhCCCCCeEC--CCCcCccCCHHHHHHHHHHhCC
Confidence            888888888888  7788888888888888888864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.76  E-value=1.1e-18  Score=103.64  Aligned_cols=85  Identities=34%  Similarity=0.742  Sum_probs=56.8

Q ss_pred             CCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHH
Q psy8966          40 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI  119 (175)
Q Consensus        40 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~  119 (175)
                      .+|.|....|++.|.+...|..|++.|.+                          +++|.|+++.|++.|.....|..|+
T Consensus         4 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--------------------------~~~~~C~~~~C~~~f~~~~~l~~H~   57 (89)
T 2wbs_A            4 ATHTCDYAGCGKTYTKSSHLKAHLRTHTG--------------------------EKPYHCDWDGCGWKFARSDELTRHY   57 (89)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHTTSCS--------------------------SCCEECCSTTTCCEESSHHHHHHHH
T ss_pred             CCeeCCCCCCCCcCCCHHHHHHHHHhcCC--------------------------CCCcCCCCCCCCCccCCHHHHHHHH
Confidence            34666333377777777777766555433                          4566775335777777777777777


Q ss_pred             hhhcCCCcccCCcccchHHHhchhhHHHHHHHh
Q psy8966         120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus       120 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h  152 (175)
                      ++|.++++|.|  ++|++.|.....|..|+++|
T Consensus        58 ~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~H   88 (89)
T 2wbs_A           58 RKHTGHRPFQC--QKCDRAFSRSDHLALHMKRH   88 (89)
T ss_dssp             HHHHCCCCEEC--SSSSCEESSHHHHHHHGGGG
T ss_pred             HHcCCCCCccC--CCCCcccCCHHHHHHHHHhh
Confidence            77777777777  66777777777777777766

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=2e-18  Score=103.87  Aligned_cols=57  Identities=37%  Similarity=0.877  Sum_probs=33.2

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcCC--CcccCCcccchHHHhchhhHHHHHH-HhcCC
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE--KPYRCAHEFCSKSFKTSGDLQKHVR-THTGK  155 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~  155 (175)
                      +++|.|+  .|++.|.....|..|+++|.++  ++|.|  ++|++.|.....|..|++ +|+++
T Consensus        33 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           33 EKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             SCSEECS--SSCCEESCHHHHHHHHHHHCCCCCSSBCC--SSSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHhcCCCCCceEC--CCccchhCCHHHHHHHHHHhcCCC
Confidence            3455554  5666666666666666665554  56666  556666666666666654 45543

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.75  E-value=1.7e-18  Score=106.98  Aligned_cols=86  Identities=37%  Similarity=0.824  Sum_probs=55.8

Q ss_pred             hcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHH
Q psy8966          36 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSR  115 (175)
Q Consensus        36 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l  115 (175)
                      |.++++|.| .  |++.|.+...|..|++.|.+                          +++|.|+  .|++.|.....|
T Consensus         5 h~~~k~~~C-~--C~~~f~~~~~l~~H~~~h~~--------------------------~~~~~C~--~C~~~f~~~~~l   53 (110)
T 2csh_A            5 SSGDKLYPC-Q--CGKSFTHKSQRDRHMSMHLG--------------------------LRPYGCG--VCGKKFKMKHHL   53 (110)
T ss_dssp             CCCCCCEEC-T--TSCEESSHHHHHHHHHHHSC--------------------------CCSEECT--TTSCEESSSHHH
T ss_pred             CCCCCCEec-c--CCCccCCHHHHHHHHHHcCC--------------------------CcCccCC--CCCcccCCHHHH
Confidence            455566666 5  66666666666666655543                          4456665  666666666666


Q ss_pred             HHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       116 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      ..|+++|.++++|.|  ++|++.|.....|..|+++|+.
T Consensus        54 ~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           54 VGHMKIHTGIKPYEC--NICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             HHHHTTTCCCCCEEC--SSSCCEESCHHHHHHHHHHHHH
T ss_pred             HHHHHHcCCCCCeeC--CCCcchhcCHHHHHHHHHHccc
Confidence            677666666667777  6677777777777777766654

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.74  E-value=7.9e-19  Score=109.32  Aligned_cols=98  Identities=16%  Similarity=0.295  Sum_probs=81.5

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhh--hcCCCCee-ccccccCccc--CChHHHHHHHHHhcCCCCCCCC
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT--HTGEKPYR-CAHEFCSKSF--KTSGDLQKHVRTHTGKYTPGPG   75 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~--~~~~~~~~-C~~~~C~~~f--~~~~~l~~H~~~h~~~~~~~~~   75 (175)
                      .|+++|++++||.|.  .|++.|....+|..|++.  +.+..++. |..  |++.|  .....|..|+            
T Consensus         9 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~--C~~~f~f~~~~~l~~H~------------   72 (115)
T 2dmi_A            9 LYGSIFTGASKFRCK--DCSAAYDTLVELTVHMNETGHYRDDNHETDNN--NPKRWSKPRKRSLLEME------------   72 (115)
T ss_dssp             CCCCCCCCCCSEEBS--SSSCEESSHHHHHHHHHHTCCCBCSCCCCCCC--CCSCCSSCCCCCCCCCC------------
T ss_pred             hheeeeCCCCCEECC--ccCchhcCHHHHHHHHHHhCccccCCCccCCC--CCcccccccHHHHHHHh------------
Confidence            488999999999998  999999999999999998  76666554 955  99988  7776666554            


Q ss_pred             CCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          76 IDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                                    +.|.+++||.|+  .|++.|...+.|..|+++|........
T Consensus        73 --------------~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           73 --------------GKEDAQKVLKCM--YCGHSFESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             --------------CSCCCCSSCBCS--SSCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred             --------------hccCCCcceECC--CCCCccCCHHHHHHHHHHhCCcccCCC
Confidence                          445568899997  899999999999999999877665554

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.74  E-value=8.6e-18  Score=98.24  Aligned_cols=82  Identities=38%  Similarity=0.783  Sum_probs=75.0

Q ss_pred             CccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhh
Q psy8966          11 PYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLR   90 (175)
Q Consensus        11 ~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~   90 (175)
                      ||.|.  .|++.|.....|..|+..|.++++|.|..  |++.|.+...|..|++.|.+                      
T Consensus         1 ~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~----------------------   54 (82)
T 2kmk_A            1 SFDCK--ICGKSFKRSSTLSTHLLIHSDTRPYPCQY--CGKRFHQKSDMKKHTFIHTG----------------------   54 (82)
T ss_dssp             CEECS--SSCCEESSHHHHHHHHHHHHTCCCEECSS--SCCEESSHHHHHHHHHHHHT----------------------
T ss_pred             CccCC--CCcccccCchhHHHHHHHcCCCCCeeCCc--CChhhCCHHHHHHHHHHhcC----------------------
Confidence            58897  99999999999999999999999999965  99999999999999888765                      


Q ss_pred             hccCCcceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          91 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        91 ~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                          +++|.|+  .|++.|...++|..|+++|+|
T Consensus        55 ----~~~~~C~--~C~~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           55 ----EKPHKCQ--VCGKAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             ----CCCEECT--TTSCEESSHHHHHHHHHHHC-
T ss_pred             ----CCCCcCC--CcchhhCChHHHHHHHHhhCC
Confidence                6789997  899999999999999999864

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.73  E-value=2.3e-17  Score=99.10  Aligned_cols=90  Identities=38%  Similarity=0.736  Sum_probs=80.2

Q ss_pred             cCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhccc
Q psy8966           6 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVRED   85 (175)
Q Consensus         6 ~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~   85 (175)
                      .+++++|.|.  .|++.|.....|..|+..|.++++|.|..  |++.|.+...|..|++.|.++                
T Consensus         2 s~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~----------------   61 (95)
T 2yt9_A            2 SSGSSGVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSCPV--CGLRFKRKDRMSYHVRSHDGS----------------   61 (95)
T ss_dssp             CCCCSCEECS--SSCCEESSSHHHHHHHHHSCSSCSEECSS--SCCEESCHHHHHHHHHHHCCC----------------
T ss_pred             CCCCCCeECC--CCCCccCChHHHHHHHHhcCCCCCCcCCC--CCCccCCHHHHHHHHHHhcCC----------------
Confidence            4678899998  99999999999999999999999999965  999999999999999988752                


Q ss_pred             chhhhhccCCcceeccCCCcccccCCHHHHHHHHh-hhcCC
Q psy8966          86 FVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGE  125 (175)
Q Consensus        86 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~  125 (175)
                              .+++|.|+  .|++.|.....|..|++ +|.++
T Consensus        62 --------~~~~~~C~--~C~~~f~~~~~L~~H~~~~H~~~   92 (95)
T 2yt9_A           62 --------VGKPYICQ--SCGKGFSRPDHLNGHIKQVHSGP   92 (95)
T ss_dssp             --------CCSSBCCS--SSCCCBSSHHHHHHHHHHTSCCC
T ss_pred             --------CCCceECC--CccchhCCHHHHHHHHHHhcCCC
Confidence                    13789997  89999999999999985 78664

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.73  E-value=3.6e-17  Score=99.19  Aligned_cols=90  Identities=38%  Similarity=0.742  Sum_probs=78.9

Q ss_pred             CCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccc
Q psy8966           7 SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDF   86 (175)
Q Consensus         7 ~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~   86 (175)
                      ...++|.|.+..|++.|.....|..|++.|.+.++|.|..+.|++.|.....|..|+++|.+                  
T Consensus        11 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~------------------   72 (100)
T 2ebt_A           11 EKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTG------------------   72 (100)
T ss_dssp             CSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTS------------------
T ss_pred             ccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCC------------------
Confidence            34567999744599999999999999999999999999633599999999999999888765                  


Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                              +++|.|+  .|++.|.....|..|+++|.+
T Consensus        73 --------~~~~~C~--~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           73 --------AKPFQCG--VCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             --------CCSCBCS--SSCCBCSSHHHHHHHHHHHCC
T ss_pred             --------CCCeECC--CCcCccCCHHHHHHHHHHhCC
Confidence                    6789997  899999999999999999964

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.72  E-value=5e-18  Score=100.19  Aligned_cols=78  Identities=23%  Similarity=0.442  Sum_probs=71.7

Q ss_pred             chhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCC----CcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966          86 FVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE----KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus        86 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~----~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      ..|++.|.+++||.|.  .|++.|.....|..|+.++.++    ++|.|  ++|++.|.....|..|+++|+++.++.|.
T Consensus         4 ~~H~~~H~~~k~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~~~~~~   79 (86)
T 1x6h_A            4 GSSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVC--SKCGKTFTRRNTMARHADNCAGPDGVEGE   79 (86)
T ss_dssp             TCCSTTCCCCCCEECS--SSSCEESSHHHHHHHHHHTTCSSCCCCCEEC--SSSCCEESCHHHHHHHHHHCCCCCSCCCC
T ss_pred             ccccceecCCCCCcCC--CCCCccCCHHHHHHHHHHhcCCcCCCcceEC--CCCCChhCCHHHHHHHHHHccCCCCcccC
Confidence            4678889999999997  8999999999999999887665    78999  88999999999999999999999999999


Q ss_pred             cchhhh
Q psy8966         162 GSILDC  167 (175)
Q Consensus       162 ~c~~~~  167 (175)
                      .|+.++
T Consensus        80 ~~~~~~   85 (86)
T 1x6h_A           80 NSGPSS   85 (86)
T ss_dssp             CCCCCC
T ss_pred             CCCCCC
Confidence            998754

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.71  E-value=3.6e-17  Score=100.96  Aligned_cols=88  Identities=38%  Similarity=0.743  Sum_probs=79.8

Q ss_pred             cccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhc
Q psy8966           4 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVR   83 (175)
Q Consensus         4 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~   83 (175)
                      .+|+++++|.|   .|++.|.....|..|++.|.+.++|.|..  |++.|.+...|..|+++|.+               
T Consensus         3 ~~h~~~k~~~C---~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~---------------   62 (110)
T 2csh_A            3 SGSSGDKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIHTG---------------   62 (110)
T ss_dssp             CCCCCCCCEEC---TTSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTTCC---------------
T ss_pred             CCCCCCCCEec---cCCCccCCHHHHHHHHHHcCCCcCccCCC--CCcccCCHHHHHHHHHHcCC---------------
Confidence            46899999999   59999999999999999999999999965  99999999999999877654               


Q ss_pred             ccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          84 EDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        84 ~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                                 +++|.|+  .|++.|.....|..|+++|..
T Consensus        63 -----------~~~~~C~--~C~~~f~~~~~l~~H~~~~~~   90 (110)
T 2csh_A           63 -----------IKPYECN--ICAKRFMWRDSFHRHVTSCTK   90 (110)
T ss_dssp             -----------CCCEECS--SSCCEESCHHHHHHHHHHHHH
T ss_pred             -----------CCCeeCC--CCcchhcCHHHHHHHHHHccc
Confidence                       6789997  899999999999999998853

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.71  E-value=1.3e-17  Score=91.27  Aligned_cols=59  Identities=29%  Similarity=0.739  Sum_probs=55.0

Q ss_pred             CCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCC
Q psy8966           8 GIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY   70 (175)
Q Consensus         8 ~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   70 (175)
                      .|+||.|.  .||++|....+|.+|+++|+++++|.|..  |++.|...+.|..|+++|.+++
T Consensus         1 SEKpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~--C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            1 SERPFFCN--FCGKTYRDASGLSRHRRAHLGYRPRSCPE--CGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCCEECT--TTCCEESSHHHHHHHHHHHHTCCCEECTT--TCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCCccCC--CCCCEeCCHHHHHHHHHHhCCCcCeECCC--CCCCcCCHHHHHHHhCccCCCC
Confidence            47999998  99999999999999999999999999965  9999999999999999998864

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.69  E-value=9.9e-17  Score=95.15  Aligned_cols=87  Identities=39%  Similarity=0.769  Sum_probs=76.7

Q ss_pred             CCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchh
Q psy8966           9 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVH   88 (175)
Q Consensus         9 ~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~   88 (175)
                      ..+|.|.+..|++.|.....|..|+..|.+.++|.|+.+.|++.|.+...|..|++.|.+                    
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~--------------------   62 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTG--------------------   62 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHC--------------------
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCC--------------------
Confidence            467999833499999999999999999999999999532599999999999999888765                    


Q ss_pred             hhhccCCcceeccCCCcccccCCHHHHHHHHhhhc
Q psy8966          89 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHT  123 (175)
Q Consensus        89 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  123 (175)
                            +++|.|+  .|++.|...++|..|+++|.
T Consensus        63 ------~~~~~C~--~C~~~f~~~~~l~~H~~~H~   89 (89)
T 2wbs_A           63 ------HRPFQCQ--KCDRAFSRSDHLALHMKRHF   89 (89)
T ss_dssp             ------CCCEECS--SSSCEESSHHHHHHHGGGGC
T ss_pred             ------CCCccCC--CCCcccCCHHHHHHHHHhhC
Confidence                  6789997  89999999999999999873

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.69  E-value=1.2e-17  Score=96.54  Aligned_cols=67  Identities=42%  Similarity=0.693  Sum_probs=63.0

Q ss_pred             hhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC
Q psy8966          90 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV  160 (175)
Q Consensus        90 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  160 (175)
                      ..+.++++|.|+  .|++.|.....|..|+++|.+++||.|  ++|++.|.....|.+|+++|+++.||.|
T Consensus        11 ~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           11 WQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKC--DECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             SCCCCSCSSBCS--SSCCBCSCHHHHHHHHTTTCCSCSEEC--SSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CcCCCCCCEECC--CCCcccCCHHHHHHHHHHcCCCcCeeC--CCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            345678999997  899999999999999999999999999  8999999999999999999999999987

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=2.1e-17  Score=100.19  Aligned_cols=71  Identities=20%  Similarity=0.300  Sum_probs=64.4

Q ss_pred             hhccCCcceeccCCCcccccCCHHHHHHHHh-hh---cCCCcccCCcccchHHHhchhhHHHH-HHHhcCCccccCCcch
Q psy8966          90 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-TH---TGEKPYRCAHEFCSKSFKTSGDLQKH-VRTHTGKYTAEVPGSI  164 (175)
Q Consensus        90 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h---~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~c~  164 (175)
                      ....+++||.|.  .|++.|...+.|..|++ +|   .+++||.|  ++|++.|..++.|..| +++|++++||.|.++.
T Consensus        11 ~~~~gekpy~C~--~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C--~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~   86 (102)
T 2ghf_A           11 QNKKVEGGYECK--YCTFQTPDLNMFTFHVDSEHPNVVLNSSYVC--VECNFLTKRYDALSEHNLKYHPGEENFKLTMVK   86 (102)
T ss_dssp             TCCCCCSSEECS--SCSCEESCHHHHHHHHHHHCSSCCCSCCEEE--TTTTEEESSTHHHHTHHHHTSTTCCCEEEEECC
T ss_pred             ccCCCCcCcCCC--CCCCccCCHHHHHHHHHhhCCCCCCCCCcCC--CCCCcccCCHHHHHHHHHHhcCCCCCeeCCccc
Confidence            345678999997  89999999999999997 58   56899999  8999999999999999 8999999999999854

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.67  E-value=6.5e-17  Score=92.75  Aligned_cols=64  Identities=36%  Similarity=0.796  Sum_probs=60.2

Q ss_pred             hccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccc
Q psy8966          91 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTA  158 (175)
Q Consensus        91 ~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~  158 (175)
                      .+.++++|.|.  .|++.|.....|..|+++|.++++|.|  ++|++.|.....|.+|+++|++++||
T Consensus        11 ~~~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRC--NICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCT--TSSCCBSCHHHHHHHHHHHCCCCSEEC--TTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECC--CCCceeCCHHHHHHHHHHcCCCCCEEC--CCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            45678899997  899999999999999999999999999  89999999999999999999999886

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.67  E-value=1.3e-16  Score=93.73  Aligned_cols=82  Identities=40%  Similarity=0.626  Sum_probs=68.6

Q ss_pred             CeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHh
Q psy8966          41 PYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR  120 (175)
Q Consensus        41 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~  120 (175)
                      +|.|.++.|++.|.+...|..|+++|.+                          ++||.|+.+.|++.|.....|..|++
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~--------------------------~~~~~C~~~~C~~~f~~~~~l~~H~~   54 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQ--------------------------QLPYECPHEGCDKRFSLPSRLKRHEK   54 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHT--------------------------TCCEECCSTTCCCEESSHHHHHHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCC--------------------------CCCeeCCCCCCcCccCCHHHHHHHHH
Confidence            4778222399999999999999887765                          56899962239999999999999999


Q ss_pred             hhcCCCcccCCccc---chHHHhchhhHHHHHHHhc
Q psy8966         121 THTGEKPYRCAHEF---CSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus       121 ~h~~~~~~~C~~~~---C~~~f~~~~~l~~H~~~h~  153 (175)
                      +|++   |.|  ++   |++.|.....|..|+++|+
T Consensus        55 ~h~~---~~C--~~~~~C~~~f~~~~~l~~H~~~hh   85 (85)
T 2j7j_A           55 VHAG---YPC--KKDDSCSFVGKTWTLYLKHVAECH   85 (85)
T ss_dssp             HHHS---EEC--CSCSSCCCEESSHHHHHHHHHHCC
T ss_pred             HhCC---CCC--CCCCCCCCccCCHHHHHHHHHhcC
Confidence            9987   999  88   9999999999999999875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.66  E-value=7.4e-17  Score=95.64  Aligned_cols=81  Identities=28%  Similarity=0.567  Sum_probs=67.4

Q ss_pred             CCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHH
Q psy8966          40 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI  119 (175)
Q Consensus        40 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~  119 (175)
                      ++|.|..  |++.|.+...|..|+++|.+                          ++||.|+  .|++.|.....|..|+
T Consensus         2 k~~~C~~--C~k~f~~~~~L~~H~~~H~~--------------------------~~~~~C~--~C~k~f~~~~~L~~H~   51 (88)
T 1llm_C            2 KPFQCRI--CMRNFSRSDHLTTHIRTHTG--------------------------EKPFACD--ICGRKFARSDERKRHR   51 (88)
T ss_dssp             CCEECTT--TCCEESCHHHHHHHHHHHHC--------------------------CCCEECT--TTCCEESSHHHHHHHH
T ss_pred             CCCcCCC--CCCccCCHHHHHHHHHHcCC--------------------------CCCccCC--CCCCccCCHHHHHHHH
Confidence            5788854  99999888888888877665                          5678886  7999999999999998


Q ss_pred             hhhcCCCcccCCcccchHHHhchhhHHHHHHHhc
Q psy8966         120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus       120 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      ++|++ .+|.|  +.|++.|.....|..|++.++
T Consensus        52 ~~h~~-~~~~c--~~C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           52 DIQHI-LPILE--DKVEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHTH-HHHHH--HHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHhCC-CcchH--HHHHHHHHHHhhhHHHHHHHH
Confidence            88864 78999  889999999999999998643

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.65  E-value=1.7e-17  Score=98.40  Aligned_cols=71  Identities=28%  Similarity=0.560  Sum_probs=66.3

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchhhhccc
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCLSG  170 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~~~~~~  170 (175)
                      ++||.|+  .|++.|...+.|..|+++|.+++||.|  ++|++.|.....|..|+++|++ .+|.|+.|+..|.+.
T Consensus         1 ek~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~   71 (88)
T 1llm_C            1 MKPFQCR--ICMRNFSRSDHLTTHIRTHTGEKPFAC--DICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKN   71 (88)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHCCCCEEC--TTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHH
T ss_pred             CCCCcCC--CCCCccCCHHHHHHHHHHcCCCCCccC--CCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHH
Confidence            4689997  899999999999999999999999999  8899999999999999999985 899999999988654

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=3.8e-16  Score=90.56  Aligned_cols=74  Identities=27%  Similarity=0.587  Sum_probs=45.7

Q ss_pred             CCCCeeccccccCcccCChHHHHHHHH-HhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHH
Q psy8966          38 GEKPYRCAHEFCSKSFKTSGDLQKHVR-THTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRK  116 (175)
Q Consensus        38 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~  116 (175)
                      ++++|.|..+.|++.|.+...|..|++ .|.+                          +++|.|+.+.|++.|.....|.
T Consensus         4 ~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~--------------------------~~~~~C~~~~C~k~f~~~~~L~   57 (79)
T 2dlk_A            4 GSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIH--------------------------QKSFSCPEPACGKSFNFKKHLK   57 (79)
T ss_dssp             CCSSEECSSTTTCCEESSHHHHHHHHHHGGGS--------------------------CCCEECSCTTTCCEESSHHHHH
T ss_pred             CCCCccCCCCCCcCccCCHHHHHHHHHHHhCC--------------------------CCCeECCCCCCcCccCCHHHHH
Confidence            344566643346666666666666655 3432                          4566665112777777777777


Q ss_pred             HHHhhhcCCCcccCCcccchHHH
Q psy8966         117 AHIRTHTGEKPYRCAHEFCSKSF  139 (175)
Q Consensus       117 ~H~~~h~~~~~~~C~~~~C~~~f  139 (175)
                      .|+++|++++||.|  ++|++.|
T Consensus        58 ~H~~~H~~~~~~~C--~~C~k~F   78 (79)
T 2dlk_A           58 EHMKLHSDTRDYIC--EFSGPSS   78 (79)
T ss_dssp             HHHHHHHTSCCCSC--CSSSCCC
T ss_pred             HHHHHhCCCCCeeC--CCCCCCC
Confidence            77777777777777  6677665

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.64  E-value=1.3e-16  Score=93.80  Aligned_cols=69  Identities=30%  Similarity=0.547  Sum_probs=63.9

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCccc--chHHHhchhhHHHHHHHhcCCccccCCc---chhhhccc
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEF--CSKSFKTSGDLQKHVRTHTGKYTAEVPG---SILDCLSG  170 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---c~~~~~~~  170 (175)
                      ||.|+++.|++.|...+.|..|+++|.+++||.|  ++  |++.|.....|..|+++|++   |.|+.   |++.|.+.
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~   74 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYEC--PHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTW   74 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEEC--CSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeC--CCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCH
Confidence            6889555899999999999999999999999999  88  99999999999999999999   99999   99988764

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=2.3e-16  Score=89.96  Aligned_cols=64  Identities=47%  Similarity=0.777  Sum_probs=59.9

Q ss_pred             hhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCc
Q psy8966          89 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY  156 (175)
Q Consensus        89 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  156 (175)
                      .+.|.+++||.|+  .|++.|.....|..|+++|.+++||.|  ++|++.|.....|..|+++|+++.
T Consensus         6 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C--~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            6 SGIHSGEKPYGCV--ECGKAFSRSSILVQHQRVHTGEKPYKC--LECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCTTTTCCCEECS--SSCCEESSHHHHHHHHHGGGCSCCEEC--SSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             CcccCCCCCccCC--CCCCccCCHHHHHHHHHhcCCCCCeEC--CCCCcccCCHHHHHHHHHhcCCCC
Confidence            4567889999997  899999999999999999999999999  889999999999999999998874

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.63  E-value=1.2e-16  Score=96.59  Aligned_cols=74  Identities=19%  Similarity=0.342  Sum_probs=67.1

Q ss_pred             cchhhhhccCCcceeccCCCcccccC-CHHHHHHHHhhhcC-CCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCc
Q psy8966          85 DFVHLRIHSGIRPYKCPVEYCEKAFS-TQYSRKAHIRTHTG-EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPG  162 (175)
Q Consensus        85 ~~~~~~~~~~~~~~~C~~~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  162 (175)
                      ...|++.|.++++|.|+  .|++.|. ....|..|+++|++ +++|.|  ++|++.|..+..|.+|+++|++++|.....
T Consensus        12 ~~~h~~~h~~~~~~~C~--~C~k~f~~~~~~L~~H~~~h~~~~~~~~C--~~C~k~F~~~~~L~~H~~~h~~~kp~~~~~   87 (98)
T 2gqj_A           12 EEQWQRAIHERGEAVCP--TCNVVTRKTLVGLKKHMEVCQKLQDALKC--QHCRKQFKSKAGLNYHTMAEHSAKPSDAEA   87 (98)
T ss_dssp             CSHHHHTTTTTSCCCCT--TTCCCCSSCSHHHHHHHHHHHHHHHHHSC--SSSCCCCSCHHHHHHHHHHHSCSCSSCCCC
T ss_pred             HHHHHHHhccCCCcCCC--CCCCChhhhHHHHHHHHHHHcCCCCCEEC--CCCCCccCCHHHHHHHHHHHcCCCCCCCCC
Confidence            35678888889999997  8999999 99999999999998 999999  899999999999999999999998866543

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=3.8e-16  Score=88.53  Aligned_cols=64  Identities=28%  Similarity=0.621  Sum_probs=60.0

Q ss_pred             ccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCcccc
Q psy8966          92 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAE  159 (175)
Q Consensus        92 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  159 (175)
                      +.++++|.|.  .|++.|.....|..|+++|.++++|.|  ++|++.|.....|.+|+++|+++.|..
T Consensus         4 ~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C~~~f~~~~~L~~H~~~h~~~~p~p   67 (70)
T 1x5w_A            4 GSSGHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKC--NYCSFDTKQPSNLSKHMKKFHGDMSGP   67 (70)
T ss_dssp             CCCCCSEECS--SSSCEESSHHHHHHHHGGGCCSCSEEC--SSSSCEESSHHHHHHHHHHHHSSSCCS
T ss_pred             CCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCEeC--CCCCCccCCHHHHHHHHHHHhCCCCCC
Confidence            5678999997  899999999999999999999999999  889999999999999999999998764

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.62  E-value=7.4e-16  Score=92.70  Aligned_cols=69  Identities=16%  Similarity=0.329  Sum_probs=60.5

Q ss_pred             hhhhccCCcceeccCCCccccc-CCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHH-HHHhcCCccccCC
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAF-STQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKH-VRTHTGKYTAEVP  161 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~  161 (175)
                      ++..+.++++|.|+  .|++.| ....+|..|+++| +++||.|  .+|++.|..+..|..| +++|+++..+.++
T Consensus        25 ~~~~~~~~~~~~C~--~C~k~F~~~~~~L~~H~~~h-~~k~~~C--~~Cgk~F~~~~~L~~H~~~~H~~~p~~~~~   95 (96)
T 2ctd_A           25 WYLEIVDKGSVSCP--TCQAVGRKTIEGLKKHMENC-KQEMFTC--HHCGKQLRSLAGMKYHVMANHNSLPSGPSS   95 (96)
T ss_dssp             HHHHHHHTSCEECT--TTCSCEESSHHHHHHHHHHH-CCCCCCC--SSSCCCCSSHHHHHHHHHHHTCCCSSCSCC
T ss_pred             HHHHhcCCCCcCCC--CCCCCcccCHHHHHHHHHHH-CCCCeEC--CCCCCeeCCHHHHHHHhHHhcCCCCCCCCC
Confidence            44445568899997  899999 9999999999999 9999999  8999999999999999 9999987666543

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.62  E-value=5e-17  Score=103.13  Aligned_cols=116  Identities=22%  Similarity=0.323  Sum_probs=83.0

Q ss_pred             cccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccC------ChHHHHHHHHHhcCCCCCCCCCC
Q psy8966           4 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFK------TSGDLQKHVRTHTGKYTPGPGID   77 (175)
Q Consensus         4 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~------~~~~l~~H~~~h~~~~~~~~~~~   77 (175)
                      .+++|.++|.|....+...|.....+..+. .....+.+.|  +.|...|.      ....|..|+ .            
T Consensus         5 ~~~~~~k~~~~~~k~~~~~~s~ee~~~~~~-l~~~~~~~~c--~~~~~~~~~~~~~~~~~~l~~h~-~------------   68 (129)
T 2wbt_A            5 DVDSGSKKYLSNHKGIFIHVTLEELKRYHQ-LTPEQKRLIR--AIVKTLIHNPQLLDESSYLYRLL-A------------   68 (129)
T ss_dssp             CCCTTCCGGGGCSSCEEEECCHHHHHHHTT-SCHHHHHHHH--HHHHHHHHCGGGTTTHHHHHHHH-H------------
T ss_pred             hhcccccccccccCCeeeeecHHhhhcccc-CChhhCcccc--hhhhcccCCCcccCCHHHHHHHH-H------------
Confidence            468899999887334444443322222221 1122344677  44766555      444444443 2            


Q ss_pred             ccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966          78 SRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                                    |.+++||.|+  .|++.|...+.|..|+++|  ++||.|  ++|++.|.....|.+|+++|++.
T Consensus        69 --------------h~~~~~~~C~--~C~k~f~~~~~l~~H~~~H--~~~~~C--~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           69 --------------SKAISQFVCP--LCLMPFSSSVSLKQHIRYT--EHTKVC--PVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             --------------HHHHCSEECT--TTCCEESSHHHHHHHHHHT--CCCCBC--TTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             --------------hCCCCCeECC--CCCcccCCHhHHHHHHHHC--CCCCCC--CCCCcccCCHHHHHHHHHHHCCc
Confidence                          4447899997  8999999999999999999  899999  88999999999999999999986

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.58  E-value=1e-15  Score=89.69  Aligned_cols=64  Identities=22%  Similarity=0.598  Sum_probs=57.6

Q ss_pred             hhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHH-HhcCCc
Q psy8966          89 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTGKY  156 (175)
Q Consensus        89 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~  156 (175)
                      +..+...++|.|+  .|++.|.....|..|+++|++++||.|  ++|++.|..+..|.+|++ +|++|.
T Consensus        20 ~~~~~~~~~h~C~--~Cgk~F~~~~~L~~H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~~H~~E~   84 (85)
T 2lv2_A           20 LGLSASAECHLCP--VCGESFASKGAQERHLRLLHAAQVFPC--KYCPATFYSSPGLTRHINKCHPSEN   84 (85)
T ss_dssp             CSSCCCCTTEECT--TSCCEESSHHHHHHHHHTTSCSSSEEC--TTSSCEESSHHHHHHHHHTTCTTCC
T ss_pred             CCCCCCCCCEECC--CCCCCcCcHHHHhhhhhhccCCCccCC--CCCCCEeCCHHHHHHhCcccCcCCC
Confidence            3456678899997  899999999999999999999999999  899999999999999974 788764

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.57  E-value=1.4e-15  Score=82.58  Aligned_cols=57  Identities=42%  Similarity=0.877  Sum_probs=50.4

Q ss_pred             CCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966          94 GIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus        94 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      +++||.|+  .|++.|.....|..|+++|++++||.|  ++|++.|.....|..|+++|++
T Consensus         1 g~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECS--YCGKFFRSNYYLNIHLRTHTGEKPYKC--EFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCT--TTCCBCSCHHHHHHHHHHHHCCCCEEC--SSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCC--CCcchhCChHHHHHHHHHcCCCCCcCC--CCCcchhCCHHHHHHHHHHhcC
Confidence            36789997  899999999999999999999999999  8899999999999999999874

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.56  E-value=7.6e-15  Score=83.55  Aligned_cols=65  Identities=46%  Similarity=0.794  Sum_probs=60.7

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCC
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY   70 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   70 (175)
                      +.++|+++++|.|.  .|++.|.....|.+|+++|.++++|.|..  |++.|.....|..|+++|.++.
T Consensus         5 ~~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            5 SSGIHSGEKPYGCV--ECGKAFSRSSILVQHQRVHTGEKPYKCLE--CGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             CCCTTTTCCCEECS--SSCCEESSHHHHHHHHHGGGCSCCEECSS--SCCEESSHHHHHHHHHHHHSSS
T ss_pred             CCcccCCCCCccCC--CCCCccCCHHHHHHHHHhcCCCCCeECCC--CCcccCCHHHHHHHHHhcCCCC
Confidence            56789999999998  99999999999999999999999999965  9999999999999999998754

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=1.5e-14  Score=84.98  Aligned_cols=65  Identities=25%  Similarity=0.620  Sum_probs=58.7

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCC----CCeeccccccCcccCChHHHHHHHHHhcCC
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE----KPYRCAHEFCSKSFKTSGDLQKHVRTHTGK   69 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~----~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   69 (175)
                      .|+++|+++++|.|.  .|++.|.....|.+|+..+...    ++|.|..  |++.|.....|..|+++|+++
T Consensus         5 ~H~~~H~~~k~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~   73 (86)
T 1x6h_A            5 SSGRTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSK--CGKTFTRRNTMARHADNCAGP   73 (86)
T ss_dssp             CCSTTCCCCCCEECS--SSSCEESSHHHHHHHHHHTTCSSCCCCCEECSS--SCCEESCHHHHHHHHHHCCCC
T ss_pred             cccceecCCCCCcCC--CCCCccCCHHHHHHHHHHhcCCcCCCcceECCC--CCChhCCHHHHHHHHHHccCC
Confidence            489999999999998  9999999999999999877665    6899965  999999999999999988774

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=3e-15  Score=83.72  Aligned_cols=61  Identities=26%  Similarity=0.554  Sum_probs=56.1

Q ss_pred             hhccCCcceeccCCCcccccCCHHHHHHHHhh-h-cCCCcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966          90 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT-H-TGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus        90 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      ..|.+++||.|+  .|++.|....+|..|+.+ | .+++||.|  ++|++.|.....|..|+++|++
T Consensus         3 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~~~~~~C--~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCK--VCSRVYTHISNFCRHYVTSHKRNVKVYPC--PFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECT--TTCCEESSHHHHHHHHHHHSSSSCCCEEC--TTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECC--CCcchhCCHHHHHHHHHHHcCCCCcCeEC--CCCCCccCCHHHHHHHHHHHcC
Confidence            457789999997  899999999999999988 7 58999999  8999999999999999999876

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=4e-15  Score=84.94  Aligned_cols=62  Identities=45%  Similarity=0.959  Sum_probs=56.8

Q ss_pred             hhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhc
Q psy8966          90 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus        90 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      ..+.++++|.|+++.|++.|.....|..|+++|.++++|.|  ++|++.|.....|.+|+++|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQC--RICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEEC--TTTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeEC--CCCCchhCCHHHHHHHHHhcC
Confidence            34677899999755799999999999999999999999999  899999999999999999885

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=5.8e-15  Score=85.15  Aligned_cols=68  Identities=29%  Similarity=0.542  Sum_probs=59.8

Q ss_pred             chhhhhccCCcceeccCCCcccccCCHHHHHHHHh-hhcCC-CcccCCcccchHHHhchhhHHHHHHHhcC-Ccc
Q psy8966          86 FVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGE-KPYRCAHEFCSKSFKTSGDLQKHVRTHTG-KYT  157 (175)
Q Consensus        86 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~  157 (175)
                      ..|++.|.+++||.|+  .|++.|.....|..|+. .|.++ ++|.|  ++|++.|.....|..|++++++ +.|
T Consensus         4 ~~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~h~~~~~~~~C--~~C~~~f~~~~~L~~H~~~~H~~~~p   74 (77)
T 2ct1_A            4 GSSGRTHSGEKPYECY--ICHARFTQSGTMKMHILQKHTENVAKFHC--PHCDTVIARKSDLGVHLRKQHSYSGP   74 (77)
T ss_dssp             CCCCCCCSCCCSEECT--TTCCEESCHHHHHHHHHHHSSSSCSSEEC--SSSSCEESSHHHHHHHHHHTSCCSCC
T ss_pred             CccccccCCCCCeECC--CcCchhCCHHHHHHHHHHhcCCCCCccCC--CCCCCccCCHHHHHHHHHHhCCCCCC
Confidence            4578889999999997  89999999999999997 67764 89999  8899999999999999998654 444

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.54  E-value=4.9e-15  Score=80.40  Aligned_cols=56  Identities=39%  Similarity=0.761  Sum_probs=52.8

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCc
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY  156 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  156 (175)
                      ||.|+  .|++.|...+.|..|+++|.+++||.|  ++|++.|.....|.+|+++|++++
T Consensus         1 p~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICE--ECGIRXKKPSMLKKHIRTHTDVRPYHC--TYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHHHTSSCCCEEC--SSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCC--CCcCcCCCHHHHHHHHHhcCCCCCccC--CCCCchhcCHHHHHHHHHHhcccC
Confidence            57886  899999999999999999999999999  889999999999999999998864

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=3.1e-14  Score=80.53  Aligned_cols=63  Identities=29%  Similarity=0.576  Sum_probs=58.7

Q ss_pred             ccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCC
Q psy8966           5 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT   71 (175)
Q Consensus         5 ~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   71 (175)
                      +++++++|.|.  .|++.|....+|.+|+++|.++++|.|..  |++.|.....|..|++.|+++.+
T Consensus         3 s~~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~--C~~~f~~~~~L~~H~~~h~~~~p   65 (70)
T 1x5w_A            3 SGSSGHPEKCS--ECSYSCSSKAALRIHERIHCTDRPFKCNY--CSFDTKQPSNLSKHMKKFHGDMS   65 (70)
T ss_dssp             SCCCCCSEECS--SSSCEESSHHHHHHHHGGGCCSCSEECSS--SSCEESSHHHHHHHHHHHHSSSC
T ss_pred             CCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCEeCCC--CCCccCCHHHHHHHHHHHhCCCC
Confidence            57899999998  99999999999999999999999999965  99999999999999999998654

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.51  E-value=3e-14  Score=82.09  Aligned_cols=64  Identities=44%  Similarity=0.727  Sum_probs=57.4

Q ss_pred             ccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCC
Q psy8966           3 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY   70 (175)
Q Consensus         3 ~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   70 (175)
                      ...+.++++|.|.  .|++.|....+|..|+++|.++++|.|..  |++.|.....|..|+++|.++.
T Consensus        10 ~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~L~~H~~~H~~~~   73 (77)
T 2cot_A           10 EWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGEKPYKCDE--CGKAFIQRSHLIGHHRVHTGSG   73 (77)
T ss_dssp             CSCCCCSCSSBCS--SSCCBCSCHHHHHHHHTTTCCSCSEECSS--SCCEESSHHHHHHHGGGSCCCC
T ss_pred             cCcCCCCCCEECC--CCCcccCCHHHHHHHHHHcCCCcCeeCCC--CCCccCCHHHHHHHHHHhCCCC
Confidence            3456788999998  99999999999999999999999999965  9999999999999988877643

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.1e-16  Score=91.31  Aligned_cols=68  Identities=26%  Similarity=0.353  Sum_probs=62.4

Q ss_pred             cchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966          85 DFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus        85 ~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      +..|++.|.+++||.|+  .|++.|...+.|..       +++|.|  ++|++.|.....|..|+++|+++.||.|++|
T Consensus         6 l~~H~~~h~~~~~~~C~--~C~k~f~~~~~l~~-------~~~~~C--~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A            6 SGKRQKIHLGDRSQKCS--KCGIIFIRRSTLSR-------RKTPMC--EKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCCCCCCCSEEECS--SSCCEEECCCCCCC-------SSSCCC--HHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HHHHHHHhCCCCCeeCC--cccchhCCHHHhCc-------CCCCCC--CCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            35688889999999997  89999999888765       789999  9999999999999999999999999999987

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.51  E-value=1.2e-14  Score=84.01  Aligned_cols=66  Identities=26%  Similarity=0.466  Sum_probs=58.7

Q ss_pred             ccCCcceeccCCCcccccCCHHHHHHHHhhhcC---CCcccCCcccchHHHhchhhHHHHHH-HhcCCccccCC
Q psy8966          92 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG---EKPYRCAHEFCSKSFKTSGDLQKHVR-THTGKYTAEVP  161 (175)
Q Consensus        92 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  161 (175)
                      |.+++||.|.  .|++.|.....|..|+++|.+   +++|.|  ++|++.|.....|.+|++ .|.++.+....
T Consensus         2 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C--~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~   71 (78)
T 2d9h_A            2 SSGSSGLQCE--ICGFTCRQKASLNWHQRKHAETVAALRFPC--EFCGKRFEKPDSVAAHRSKSHPALLLAPQE   71 (78)
T ss_dssp             CCSCCCEECS--SSCCEESSHHHHHHHHHHHHHHTTTCCEEC--TTTCCEESSHHHHHHHHHHTSTTTSSCCSS
T ss_pred             CCCCcCeECC--CCCCeeCCHHHHHHHHHHhhccCCCcccCC--CCCCchhCCHHHHHHHHHHhCCCCCCCccc
Confidence            6778999997  899999999999999999986   899999  899999999999999995 67777665544

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.50  E-value=6.3e-14  Score=80.11  Aligned_cols=64  Identities=36%  Similarity=0.788  Sum_probs=58.0

Q ss_pred             cccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCC
Q psy8966           4 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT   71 (175)
Q Consensus         4 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   71 (175)
                      ..++++++|.|.  .|++.|.....|..|++.|.++++|.|..  |++.|.....|..|+++|.++.+
T Consensus        10 ~~~~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C~~--C~k~f~~~~~L~~H~~~H~~~kp   73 (74)
T 2lce_A           10 HMTHSDKPYKCD--RCQASFRYKGNLASHKTVHTGEKPYRCNI--CGAQFNRPANLKTHTRIHSGEKP   73 (74)
T ss_dssp             -CCCCCCSBCCT--TSSCCBSCHHHHHHHHHHHCCCCSEECTT--TCCEESCHHHHHHHHHHHCCSCC
T ss_pred             cccCCCCCeECC--CCCceeCCHHHHHHHHHHcCCCCCEECCC--CCchhCCHHHHHHHHHhcCCCCC
Confidence            356788999998  99999999999999999999999999955  99999999999999999988653

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.50  E-value=4.9e-14  Score=81.19  Aligned_cols=64  Identities=33%  Similarity=0.659  Sum_probs=58.1

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHh-hhcCC-CCeeccccccCcccCChHHHHHHHHHhcC
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGE-KPYRCAHEFCSKSFKTSGDLQKHVRTHTG   68 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~-~~~~~-~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   68 (175)
                      .|+++|++++||.|.  .|++.|....+|..|+. .|.+. ++|.|..  |++.|.....|..|++.+++
T Consensus         5 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~--C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            5 SSGRTHSGEKPYECY--ICHARFTQSGTMKMHILQKHTENVAKFHCPH--CDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCSCCCSEECT--TTCCEESCHHHHHHHHHHHSSSSCSSEECSS--SSCEESSHHHHHHHHHHTSC
T ss_pred             ccccccCCCCCeECC--CcCchhCCHHHHHHHHHHhcCCCCCccCCCC--CCCccCCHHHHHHHHHHhCC
Confidence            489999999999998  99999999999999997 57664 7899965  99999999999999998765

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.49  E-value=2.9e-14  Score=85.45  Aligned_cols=62  Identities=31%  Similarity=0.480  Sum_probs=56.9

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhh-hcCCCc--------ccCCcccchHHHhchhhHHHHHHHhcCCccccCCc
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRT-HTGEKP--------YRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPG  162 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~--------~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  162 (175)
                      .+.|+  .|++.|.....|..|+++ |.++++        |.|  ++|++.|.....|..|+++|++++||.|+.
T Consensus        25 ~~~C~--~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   95 (95)
T 2ej4_A           25 SRPKK--SCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEEC--PREGKSFKAKYKLVNHIRVHTGEKSGPSSG   95 (95)
T ss_dssp             SSSCC--CCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTC--SSTTCCCSSHHHHHHHHHHHHTCCCCSSCC
T ss_pred             CCccc--ccccccCCHHHHHHHHHHhccCCCCCCccceeccCC--CCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            35565  899999999999999998 988887        999  899999999999999999999999999973

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.49  E-value=1.6e-14  Score=87.27  Aligned_cols=67  Identities=22%  Similarity=0.394  Sum_probs=62.2

Q ss_pred             cccccCCCCCccCCCccchhhcc-ChHHHHHHHhhhcC-CCCeeccccccCcccCChHHHHHHHHHhcCCCCC
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFS-TQYSRKAHIRTHTG-EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTP   72 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~-~~~~L~~h~~~~~~-~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~   72 (175)
                      |+++|+++++|.|.  .|++.|. ....|..|+++|.+ +++|.|..  |++.|.....|..|++.|+++.+.
T Consensus        15 h~~~h~~~~~~~C~--~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~--C~k~F~~~~~L~~H~~~h~~~kp~   83 (98)
T 2gqj_A           15 WQRAIHERGEAVCP--TCNVVTRKTLVGLKKHMEVCQKLQDALKCQH--CRKQFKSKAGLNYHTMAEHSAKPS   83 (98)
T ss_dssp             HHHTTTTTSCCCCT--TTCCCCSSCSHHHHHHHHHHHHHHHHHSCSS--SCCCCSCHHHHHHHHHHHSCSCSS
T ss_pred             HHHHhccCCCcCCC--CCCCChhhhHHHHHHHHHHHcCCCCCEECCC--CCCccCCHHHHHHHHHHHcCCCCC
Confidence            78899999999998  9999999 99999999999998 88999955  999999999999999999987663

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.49  E-value=3.1e-14  Score=79.54  Aligned_cols=62  Identities=24%  Similarity=0.496  Sum_probs=56.5

Q ss_pred             ccccCCCCCccCCCccchhhccChHHHHHHHhh-h-cCCCCeeccccccCcccCChHHHHHHHHHhcC
Q psy8966           3 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRT-H-TGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG   68 (175)
Q Consensus         3 ~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~-~-~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   68 (175)
                      +++|++++||.|.  .|++.|....+|..|+.. | .++++|.|+.  |++.|.+...|..|++.+++
T Consensus         2 ~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            2 EFTKEGEHTYRCK--VCSRVYTHISNFCRHYVTSHKRNVKVYPCPF--CFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             -CEEEETTEEECT--TTCCEESSHHHHHHHHHHHSSSSCCCEECTT--TCCEESCHHHHHHHHHHHTC
T ss_pred             ccccCCCcceECC--CCcchhCCHHHHHHHHHHHcCCCCcCeECCC--CCCccCCHHHHHHHHHHHcC
Confidence            5789999999998  999999999999999998 6 5889999965  99999999999999998875

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.48  E-value=1.9e-14  Score=78.88  Aligned_cols=56  Identities=39%  Similarity=0.858  Sum_probs=52.1

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHH-HHhcCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHTGK  155 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~  155 (175)
                      +||.|+  .|++.|...+.|..|+++|++++||.|  ++|++.|.+...|..|+ ++|+++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEKPYPC--GLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCT--TTCCCBSCHHHHHHHHHTTTSSCSEEC--TTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCC--CCccccCCHHHHHHHHHHhCCCCCccC--CCCCCccCCHHHHHHHHHHHcCCc
Confidence            478996  899999999999999999999999999  88999999999999997 688775

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=1.6e-13  Score=82.40  Aligned_cols=80  Identities=16%  Similarity=0.252  Sum_probs=68.4

Q ss_pred             hhhccChHHHHHHHhhhcCCCCeeccccccCccc-CChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcce
Q psy8966          20 EKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSF-KTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPY   98 (175)
Q Consensus        20 ~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f-~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (175)
                      ..+|.....|..|+..+.+.++|.|..  |++.| .+...|..|+++| +                          ++||
T Consensus        13 ~~~~~~~~~~~~~~~~~~~~~~~~C~~--C~k~F~~~~~~L~~H~~~h-~--------------------------~k~~   63 (96)
T 2ctd_A           13 PPVYAAGSLEEQWYLEIVDKGSVSCPT--CQAVGRKTIEGLKKHMENC-K--------------------------QEMF   63 (96)
T ss_dssp             CCSSCTTCHHHHHHHHHHHTSCEECTT--TCSCEESSHHHHHHHHHHH-C--------------------------CCCC
T ss_pred             CCCCCCchHHHHHHHHhcCCCCcCCCC--CCCCcccCHHHHHHHHHHH-C--------------------------CCCe
Confidence            446777888999999999999999955  99999 9999999998877 5                          6789


Q ss_pred             eccCCCcccccCCHHHHHHH-HhhhcCCCcccC
Q psy8966          99 KCPVEYCEKAFSTQYSRKAH-IRTHTGEKPYRC  130 (175)
Q Consensus        99 ~C~~~~C~~~f~~~~~l~~H-~~~h~~~~~~~C  130 (175)
                      .|.  .|++.|...+.|..| +.+|+++..|.+
T Consensus        64 ~C~--~Cgk~F~~~~~L~~H~~~~H~~~p~~~~   94 (96)
T 2ctd_A           64 TCH--HCGKQLRSLAGMKYHVMANHNSLPSGPS   94 (96)
T ss_dssp             CCS--SSCCCCSSHHHHHHHHHHHTCCCSSCSC
T ss_pred             ECC--CCCCeeCCHHHHHHHhHHhcCCCCCCCC
Confidence            996  899999999999999 899976555544

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.46  E-value=8.2e-14  Score=81.52  Aligned_cols=63  Identities=22%  Similarity=0.568  Sum_probs=55.6

Q ss_pred             ccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHH-HhcCC
Q psy8966           3 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTGK   69 (175)
Q Consensus         3 ~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~   69 (175)
                      +.++++.++|.|.  .||+.|....+|.+|+++|+++++|.|..  |++.|.....|..|++ .|.++
T Consensus        20 ~~~~~~~~~h~C~--~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~--C~k~F~~~~~L~~H~~~~H~~E   83 (85)
T 2lv2_A           20 LGLSASAECHLCP--VCGESFASKGAQERHLRLLHAAQVFPCKY--CPATFYSSPGLTRHINKCHPSE   83 (85)
T ss_dssp             CSSCCCCTTEECT--TSCCEESSHHHHHHHHHTTSCSSSEECTT--SSCEESSHHHHHHHHHTTCTTC
T ss_pred             CCCCCCCCCEECC--CCCCCcCcHHHHhhhhhhccCCCccCCCC--CCCEeCCHHHHHHhCcccCcCC
Confidence            3456778899998  99999999999999999999999999955  9999999999999975 56553

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.46  E-value=9.6e-14  Score=75.16  Aligned_cols=57  Identities=39%  Similarity=0.814  Sum_probs=49.7

Q ss_pred             CCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcC
Q psy8966           8 GIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG   68 (175)
Q Consensus         8 ~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   68 (175)
                      |++||.|.  .|++.|.....|..|+++|.++++|.|..  |++.|.....|..|++.|++
T Consensus         1 g~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECS--YCGKFFRSNYYLNIHLRTHTGEKPYKCEF--CEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCT--TTCCBCSCHHHHHHHHHHHHCCCCEECSS--SSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCC--CCcchhCChHHHHHHHHHcCCCCCcCCCC--CcchhCCHHHHHHHHHHhcC
Confidence            46899998  99999999999999999999999999965  99999999999999998863

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.45  E-value=9.3e-14  Score=84.10  Aligned_cols=71  Identities=20%  Similarity=0.333  Sum_probs=46.6

Q ss_pred             cCCCCeeccccccCcccCChHHHHHHHHH-hcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHH
Q psy8966          37 TGEKPYRCAHEFCSKSFKTSGDLQKHVRT-HTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSR  115 (175)
Q Consensus        37 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l  115 (175)
                      .++++|.|..  |++.|.....|..|++. |.+.                       .+++||.|.  .|++.|...+.|
T Consensus        14 ~gekpy~C~~--Cgk~F~~~~~L~~H~r~~H~~~-----------------------~~ekpf~C~--~Cgk~F~~~~~L   66 (102)
T 2ghf_A           14 KVEGGYECKY--CTFQTPDLNMFTFHVDSEHPNV-----------------------VLNSSYVCV--ECNFLTKRYDAL   66 (102)
T ss_dssp             CCCSSEECSS--CSCEESCHHHHHHHHHHHCSSC-----------------------CCSCCEEET--TTTEEESSTHHH
T ss_pred             CCCcCcCCCC--CCCccCCHHHHHHHHHhhCCCC-----------------------CCCCCcCCC--CCCcccCCHHHH
Confidence            4556677744  77777777777777653 4220                       125667775  677777777777


Q ss_pred             HHH-HhhhcCCCcccCCcccch
Q psy8966         116 KAH-IRTHTGEKPYRCAHEFCS  136 (175)
Q Consensus       116 ~~H-~~~h~~~~~~~C~~~~C~  136 (175)
                      ..| +++|++++||.|  .++.
T Consensus        67 ~~H~~r~Htgekpy~C--~~~~   86 (102)
T 2ghf_A           67 SEHNLKYHPGEENFKL--TMVK   86 (102)
T ss_dssp             HTHHHHTSTTCCCEEE--EECC
T ss_pred             HHHHHHhcCCCCCeeC--Cccc
Confidence            777 677777777777  5533

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.44  E-value=1.4e-14  Score=75.06  Aligned_cols=44  Identities=32%  Similarity=0.583  Sum_probs=34.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKC--VECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCC--SSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCccc--CccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5667777888888  7788888888888888888888888888776

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=1.3e-14  Score=74.41  Aligned_cols=44  Identities=27%  Similarity=0.524  Sum_probs=32.6

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|++|
T Consensus         1 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGC--SCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEEC--SSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccC--CCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4556777777777  6777777777777777777777777777766

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.5e-14  Score=74.98  Aligned_cols=44  Identities=36%  Similarity=0.597  Sum_probs=31.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            3 SGSSGTGERPHKC--NECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEEC--SSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CcCCcCCCCCeeC--CCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5566667777777  6677777777777777777777777777665

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.44  E-value=1.6e-14  Score=74.85  Aligned_cols=44  Identities=36%  Similarity=0.548  Sum_probs=34.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            3 SGSSGTGEKLYNC--KECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSCCCCCCB--TTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CcccCCCCCCeEC--CCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            5667777777888  7788888888888888878877778887776

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.44  E-value=1.7e-14  Score=74.79  Aligned_cols=44  Identities=36%  Similarity=0.656  Sum_probs=32.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            3 SGSSGTGEKPYEC--KECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSCSCBC--SSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCccCCCCceEC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5566777777777  6677777777777777777777777777765

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.5e-14  Score=74.96  Aligned_cols=44  Identities=36%  Similarity=0.660  Sum_probs=31.3

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            3 SGSSGTGEKPYEC--SVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEC--SSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             ccCCcCCCCCeeC--CCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            5566667777777  6677777777777777777777777777765

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.43  E-value=1.5e-14  Score=75.01  Aligned_cols=44  Identities=23%  Similarity=0.474  Sum_probs=31.5

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            3 SGSSGMGEKTWKC--RECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCCCC--SSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CcCccCCCcCeEC--CCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            5566677777777  6677777777777777777777777777765

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.5e-14  Score=74.92  Aligned_cols=44  Identities=36%  Similarity=0.644  Sum_probs=33.2

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            3 SGSSGTGEKPYKC--NECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSSEE--TTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCeEC--CCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5566777777777  7777777777777777777777777777766

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.1e-14  Score=74.39  Aligned_cols=44  Identities=34%  Similarity=0.571  Sum_probs=32.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            3 SGSSGTGEKPYIC--AECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             SSCTTSSCCSEEC--SSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             cccCCCCCcCeEC--CCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5666777777777  6777777777777777777777777777765

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.7e-14  Score=74.80  Aligned_cols=44  Identities=34%  Similarity=0.596  Sum_probs=31.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            3 SGSSGTGENPYEC--HECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCEEC--SSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCcCcCC--CCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            5566677777777  6677777777777777777777777777765

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.9e-14  Score=74.55  Aligned_cols=44  Identities=32%  Similarity=0.611  Sum_probs=32.5

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            3 SGSSGTGEKPFKC--DICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSCCC--SSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCcCC--CcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5566777777777  6677777777777777777777777777766

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.8e-14  Score=74.68  Aligned_cols=44  Identities=34%  Similarity=0.651  Sum_probs=31.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            3 SGSSGSGEKPYKC--NECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSSCSEEC--SSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CcccCCCCCCEeC--CcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            5556667777777  6677777777777777777777777777665

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=2.1e-14  Score=74.42  Aligned_cols=44  Identities=36%  Similarity=0.618  Sum_probs=32.7

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|+++.||.|++|
T Consensus         3 H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            3 SGSSGTGEKPYKC--SDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSCBC--SSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCccC--CccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5566777777777  6777777777777777777777777777766

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.9e-14  Score=74.59  Aligned_cols=44  Identities=34%  Similarity=0.634  Sum_probs=31.7

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            3 SGSSGSGEKPYKC--SECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEEC--SSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CccccCCCcCeEC--CCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            5566677777777  6677777777777777777777777777765

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.6e-14  Score=74.90  Aligned_cols=44  Identities=32%  Similarity=0.615  Sum_probs=29.7

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            3 SGSSGTGKKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCSSCBC--TTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCcCCCCCcCeEC--CCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            4556666666777  6677777777777777666766667766665

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.6e-14  Score=74.85  Aligned_cols=44  Identities=34%  Similarity=0.657  Sum_probs=31.2

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            3 SGSSGTGERPYIC--TVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSCCCSEEC--TTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCcCC--CCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5566667777777  6677777777777777777777777777665

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.9e-14  Score=74.54  Aligned_cols=44  Identities=36%  Similarity=0.670  Sum_probs=31.4

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            3 SGSSGTGEKPYEC--SICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSSCSSCCCSEEC--SSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCcCcCC--CCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5566677777777  6677777777777777777777777777765

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.8e-14  Score=74.66  Aligned_cols=44  Identities=34%  Similarity=0.567  Sum_probs=31.9

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|.+++||.|  ++|++.|.....|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            3 SGSSGTGEKPFDC--IDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCSBCC--TTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCcCCCCCeEC--CCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4566677777777  6677777777777777777777777777765

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.6e-14  Score=74.87  Aligned_cols=44  Identities=32%  Similarity=0.532  Sum_probs=30.2

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            3 SGSSGTGVKPYMC--NECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCSSCCCSEEC--SSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             cccccCCCcCeEC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5556666677777  6677777777777777777777777777665

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.43  E-value=1.4e-14  Score=75.02  Aligned_cols=44  Identities=36%  Similarity=0.676  Sum_probs=30.4

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..++.|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            3 SGSSGTGEKPYKC--NECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCSSSEEC--SSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             cccCCCCCCCeEC--CCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            5556666677777  6677777777777777777777777777665

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.6e-14  Score=74.88  Aligned_cols=44  Identities=25%  Similarity=0.542  Sum_probs=31.6

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|...+.|..|+++|+++.||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            3 SGSSGSGERPYGC--NECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCEEC--SSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCEEc--cccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            5566677777777  6677777777777777777777777777765

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.8e-14  Score=74.70  Aligned_cols=44  Identities=32%  Similarity=0.559  Sum_probs=29.2

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKC--EDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBC--SSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeC--cccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4455666666666  6666666666666666666666666666665

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=8.9e-14  Score=77.71  Aligned_cols=59  Identities=25%  Similarity=0.446  Sum_probs=54.1

Q ss_pred             cCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcc-cchHHHhchhhHHHHHHHhcCCcc
Q psy8966          93 SGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHE-FCSKSFKTSGDLQKHVRTHTGKYT  157 (175)
Q Consensus        93 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~-~C~~~f~~~~~l~~H~~~h~~~~~  157 (175)
                      -+++||.|.  .|++.|. .++|..|+++ ++++||.|  + +|++.|..++.|..|+++|.+..|
T Consensus         6 C~~~~~~C~--~C~k~f~-~~~L~~H~~~-~~~~p~~C--~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            6 SGKRTQPCT--YCTKEFV-FDTIQSHQYQ-CPRLPVAC--PNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCEEECS--SSCCEEE-HHHHHHHHHH-CSSSEEEC--TTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             CCCCCeecc--ccCCccC-HHHHHHHHHH-cCCcCccC--CcccCcccccHHHHHHHHHhhcccCc
Confidence            347899997  8999999 9999999999 99999999  8 899999999999999999987755

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.9e-14  Score=74.58  Aligned_cols=44  Identities=36%  Similarity=0.701  Sum_probs=33.5

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            3 SGSSGTGEKPYKC--NECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             SSCCCSSCCTTCC--TTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCcCCCCCcCcCC--CCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5666777777777  7777777777777777777777777777776

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.4e-14  Score=74.18  Aligned_cols=44  Identities=36%  Similarity=0.733  Sum_probs=31.5

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|+++.||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            3 SGSSGSGEKPYVC--DYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCTTCCCCSEEC--SSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCeEC--CCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5566677777777  6677777777777777777777777777765

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.42  E-value=1.8e-14  Score=74.65  Aligned_cols=44  Identities=32%  Similarity=0.597  Sum_probs=29.0

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            3 SGSSGTGEKRYKC--NECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             SCSSCTTSCCEEC--SSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CccCCCCCcCcCC--CCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            4556666666666  6666666666666666666666666666655

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.42  E-value=1.5e-14  Score=74.97  Aligned_cols=44  Identities=34%  Similarity=0.575  Sum_probs=29.5

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|...+.|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            3 SGSSGTGVKPYGC--SQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCSEEC--SSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             cccCCCCCCceEC--CCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4556666666666  6666666666666666666666666666665

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2e-14  Score=74.47  Aligned_cols=44  Identities=34%  Similarity=0.619  Sum_probs=31.0

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGC--SECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBC--SSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCC--CccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4556667777777  6677777777777777777777777777665

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2e-14  Score=74.47  Aligned_cols=44  Identities=36%  Similarity=0.554  Sum_probs=32.0

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            3 SGSSGTGEKPHEC--RECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSCBC--TTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CccccCCCCCeeC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5566777777777  6677777777777777777777777777765

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.2e-14  Score=74.35  Aligned_cols=44  Identities=34%  Similarity=0.616  Sum_probs=33.5

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKC--MECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSB--TTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4566777777777  7777777777777777777777777777776

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=1.8e-14  Score=74.62  Aligned_cols=44  Identities=34%  Similarity=0.642  Sum_probs=30.9

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            3 SGSSGTGEKPYKC--HECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCEEC--TTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCcCCCCCCCeEC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4556666777777  6677777777777777777777777777665

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=1.8e-14  Score=74.69  Aligned_cols=44  Identities=39%  Similarity=0.625  Sum_probs=28.2

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|++++||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKC--EECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEEC--SSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccC--CCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455666666666  5666666666666666666666666666655

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.42  E-value=2.2e-14  Score=74.33  Aligned_cols=44  Identities=32%  Similarity=0.478  Sum_probs=33.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|.+++||.|  ++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            3 SGSSGTGEKPCKC--TECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSEEC--SSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             CcccCCCCCCeeC--CCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5566777777777  6777777777777777777777777777766

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=2.6e-14  Score=74.03  Aligned_cols=44  Identities=20%  Similarity=0.279  Sum_probs=31.9

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|.+++||.|  ++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQC--RECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEEC--TTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEc--cccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4566677777777  6677777777777777777777777777765

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=2.6e-14  Score=74.05  Aligned_cols=44  Identities=32%  Similarity=0.625  Sum_probs=31.3

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|++++||.|++|
T Consensus         3 h~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKC--EECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEEC--SSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCC--CCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4556667777777  6677777777777777777777777777765

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.5e-14  Score=74.95  Aligned_cols=44  Identities=36%  Similarity=0.663  Sum_probs=31.9

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|+++.||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            3 SGSSGTGEKPYKC--NECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEEC--SSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             cCcCCCCCCCeEC--CcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            5566677777777  6677777777777777777777777777765

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=1.8e-14  Score=74.62  Aligned_cols=44  Identities=23%  Similarity=0.443  Sum_probs=30.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|+++.||.|++|
T Consensus         3 H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            3 SGSSGSSTKSHQC--HECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCSEEC--SSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CcCCCCCCCCeEC--CcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5556666667777  6677777777777777777777777777665

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=1.8e-14  Score=74.67  Aligned_cols=44  Identities=27%  Similarity=0.498  Sum_probs=26.9

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFEC--TECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEEC--SSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeEC--CCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4455556666666  5566666666666666666666666666554

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.3e-14  Score=74.22  Aligned_cols=44  Identities=36%  Similarity=0.628  Sum_probs=32.6

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|++++||.|++|
T Consensus         3 h~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            3 SGSSGSGEKPYGC--NECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCEEE--TTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCccCCCcCeEC--CCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            5566777777777  6677777777777777777777777777766

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.41  E-value=2.3e-14  Score=74.21  Aligned_cols=44  Identities=34%  Similarity=0.678  Sum_probs=31.3

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|+++.||.|+.|
T Consensus         3 H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            3 SGSSGSGEKPFKC--EECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             STTCCCCCCSEEE--TTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             cccCCCCCCCeeC--CCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5566677777777  6677777777777777777777777777665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.41  E-value=2.3e-14  Score=74.24  Aligned_cols=44  Identities=27%  Similarity=0.440  Sum_probs=31.5

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            3 SGSSGSGEKSHTC--DECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSSEEC--TTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             ccccCCCCCCeEC--CCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            5566667777777  6677777777777777777777777777765

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.41  E-value=2.4e-14  Score=74.18  Aligned_cols=44  Identities=39%  Similarity=0.646  Sum_probs=28.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|+++.||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            3 SGSSGTGEKPYNC--KECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             SCCSCCCCCSEEC--SSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCcCeEC--CccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4556666666666  6666666666666666666666666666655

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.41  E-value=3.6e-13  Score=76.66  Aligned_cols=63  Identities=44%  Similarity=0.906  Sum_probs=56.2

Q ss_pred             ccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhc
Q psy8966           3 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHT   67 (175)
Q Consensus         3 ~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~   67 (175)
                      ..+++++++|.|.+..|++.|.....|..|+++|.++++|.|..  |++.|.....|..|+++|+
T Consensus        11 ~~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           11 NYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRI--CMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             SCCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTT--TCCEESCHHHHHHHHTTCC
T ss_pred             hccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCC--CCchhCCHHHHHHHHHhcC
Confidence            35678899999963369999999999999999999999999965  9999999999999998763

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.41  E-value=3.3e-14  Score=73.66  Aligned_cols=44  Identities=30%  Similarity=0.476  Sum_probs=30.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|.+++||.|  ++|++.|..+..|..|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKC--SQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEEC--SSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeEC--CCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4556666777777  6677777777777777777777777777665

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.40  E-value=2e-14  Score=74.48  Aligned_cols=44  Identities=34%  Similarity=0.652  Sum_probs=30.7

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|++|
T Consensus         3 H~~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKC--EKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEE--TTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeEC--CCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            4556666777777  6677777777777777777777777777665

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.4e-14  Score=73.62  Aligned_cols=44  Identities=36%  Similarity=0.614  Sum_probs=28.5

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|.+++||.|  ++|++.|.....|.+|+++|++++||.|++|
T Consensus         3 h~~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKC--VECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEEC--SSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeEC--cccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            3455666666666  6666666666666666666666666666665

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.39  E-value=7.4e-14  Score=74.88  Aligned_cols=47  Identities=28%  Similarity=0.483  Sum_probs=34.3

Q ss_pred             hcCCCcccCCcccchHHHhchhhHHHHHH-HhcCCccccCCcchhhhccc
Q psy8966         122 HTGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTGKYTAEVPGSILDCLSG  170 (175)
Q Consensus       122 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~c~~~~~~~  170 (175)
                      |.+++||.|  ++|++.|.....|.+|++ +|+++.||.|++|++.|.++
T Consensus         7 ~~~~k~~~C--~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~~   54 (54)
T 2eps_A            7 GSVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSSG   54 (54)
T ss_dssp             CCSSCCEEC--SSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCCC
T ss_pred             CCCCCCeEC--CCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCCC
Confidence            456677777  667777777777777776 77777777777777777653

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=1.8e-14  Score=74.69  Aligned_cols=44  Identities=34%  Similarity=0.622  Sum_probs=31.6

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|++|
T Consensus         3 H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            3 SGSSGTGEKPFKC--GECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEC--TTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCeEC--CCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5566667777777  6677777777777777777777777777765

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.39  E-value=3.8e-14  Score=73.40  Aligned_cols=44  Identities=36%  Similarity=0.656  Sum_probs=30.0

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|+++.||.|++|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            3 SGSSGTGEKPYRC--AECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSCCCSEEC--SSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCeEC--CCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            5556666677777  6677777777777777777777777776654

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.38  E-value=5e-13  Score=77.08  Aligned_cols=62  Identities=23%  Similarity=0.415  Sum_probs=54.7

Q ss_pred             ccCCCCCccCCCccchhhccChHHHHHHHhhhcC---CCCeeccccccCcccCChHHHHHHHHH-hcCCC
Q psy8966           5 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG---EKPYRCAHEFCSKSFKTSGDLQKHVRT-HTGKY   70 (175)
Q Consensus         5 ~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~---~~~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~   70 (175)
                      +|++++||.|.  .|++.|.....|.+|+++|.+   +++|.|..  |++.|.....|..|++. |.+..
T Consensus         1 ~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            1 GSSGSSGLQCE--ICGFTCRQKASLNWHQRKHAETVAALRFPCEF--CGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCCSCCCEECS--SSCCEESSHHHHHHHHHHHHHHTTTCCEECTT--TCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCCcCeECC--CCCCeeCCHHHHHHHHHHhhccCCCcccCCCC--CCchhCCHHHHHHHHHHhCCCCC
Confidence            47899999998  999999999999999999985   78999965  99999999999999955 54443

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.38  E-value=8.6e-13  Score=71.32  Aligned_cols=55  Identities=40%  Similarity=0.747  Sum_probs=51.4

Q ss_pred             CccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCC
Q psy8966          11 PYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK   69 (175)
Q Consensus        11 ~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   69 (175)
                      ||.|.  .|++.|.....|..|+++|.++++|.|..  |++.|.....|..|+++|.++
T Consensus         1 p~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~   55 (57)
T 1bbo_A            1 KYICE--ECGIRXKKPSMLKKHIRTHTDVRPYHCTY--CNFSFKTKGNLTKHMKSKAHS   55 (57)
T ss_dssp             CCBCT--TTCCBCSSHHHHHHHHHHTSSCCCEECSS--SSCEESSHHHHHHHHHSSSSC
T ss_pred             CCcCC--CCcCcCCCHHHHHHHHHhcCCCCCccCCC--CCchhcCHHHHHHHHHHhccc
Confidence            68897  99999999999999999999999999965  999999999999999998764

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.37  E-value=2.7e-13  Score=77.01  Aligned_cols=60  Identities=43%  Similarity=0.765  Sum_probs=53.5

Q ss_pred             hccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCccc--chHHHhchhhHHHHHHHh
Q psy8966          91 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEF--CSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus        91 ~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h  152 (175)
                      .....++|.|++..|++.|.....|..|+++|++++||.|  ++  |++.|.....|.+|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSC--SWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEEC--CCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccC--CCCCCCcccCCHHHHHhHhhcC
Confidence            3456789999744499999999999999999999999999  75  999999999999999876

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=5.9e-14  Score=72.96  Aligned_cols=44  Identities=34%  Similarity=0.575  Sum_probs=30.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHH-HhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~c  163 (175)
                      |+++|.+++||.|  ++|++.|.....|..|++ +|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            3 SGSSGTGKKPYEC--IECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCSBCC--SSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             cccccCCCCCEEC--CccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            4556666777777  667777777777777777 7777777777665

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=8e-14  Score=72.16  Aligned_cols=44  Identities=32%  Similarity=0.658  Sum_probs=28.7

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|+.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKC--KECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEEC--SSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEEC--CcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            4555666666666  6666666666666666666666666666653

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.36  E-value=1.5e-13  Score=70.72  Aligned_cols=42  Identities=38%  Similarity=0.703  Sum_probs=34.0

Q ss_pred             hhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcch
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSI  164 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~  164 (175)
                      +|++++||.|  ++|++.|..+..|..|+++|+++.+|.|+.||
T Consensus         4 ~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSC--PVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEE--TTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcC--CCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            4677788888  77888888888888888888888888888876

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.34  E-value=1.3e-13  Score=69.84  Aligned_cols=42  Identities=33%  Similarity=0.631  Sum_probs=28.4

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+
T Consensus         1 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYEC--SECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEEC--SSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccC--CCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            3455666677777  66777777777777777777777776664

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=1.6e-13  Score=70.97  Aligned_cols=42  Identities=38%  Similarity=0.651  Sum_probs=28.0

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            3 SGSSGTGQRPYEC--IECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             SCCCCCCSSSEEC--SSSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CccccCCCcCcCC--CCCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4556666666666  66666666666666666666666666665

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.34  E-value=1.6e-13  Score=70.99  Aligned_cols=42  Identities=40%  Similarity=0.673  Sum_probs=28.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emj_A            3 SGSSGTGEKPFEC--AECGKSFSISSQLATHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSEEC--SSSSCEESSHHHHHHHHHHHTTSCSSSSC
T ss_pred             CCCCCCCCCCEEC--CCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4556666666666  66666666666666666666666666665

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.1e-13  Score=70.50  Aligned_cols=42  Identities=36%  Similarity=0.676  Sum_probs=27.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eow_A            3 SGSSGTGEKPYKC--NECGKAFRARSSLAIHQATHSGEKPSGPS   44 (46)
T ss_dssp             CCCCSCCCCCEEC--TTSCCEESSHHHHHHHHHHHCCCSCSCTT
T ss_pred             ccCCCCCCCCeec--cccCChhcCHHHHHHHHHHcCCCCCCCCC
Confidence            4556666666666  66666666666666666666666666665

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2e-13  Score=70.57  Aligned_cols=42  Identities=40%  Similarity=0.746  Sum_probs=27.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            3 SGSSGTGEKPYEC--KVCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSSCCSEEC--SSSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCcCeEC--CCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4556666666666  66666666666666666666666666665

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.32  E-value=2.9e-12  Score=69.98  Aligned_cols=56  Identities=39%  Similarity=0.843  Sum_probs=50.9

Q ss_pred             CCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHH-HHhcCC
Q psy8966          10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHTGK   69 (175)
Q Consensus        10 ~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~   69 (175)
                      +||.|.  .|++.|.....|..|+++|.++++|.|..  |++.|.+...|..|+ +.|.++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEKPYPCGL--CNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCT--TTCCCBSCHHHHHHHHHTTTSSCSEECTT--TCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCC--CCccccCCHHHHHHHHHHhCCCCCccCCC--CCCccCCHHHHHHHHHHHcCCc
Confidence            589997  99999999999999999999999999965  999999999999997 567653

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.8e-13  Score=70.75  Aligned_cols=42  Identities=36%  Similarity=0.646  Sum_probs=28.0

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            3 SGSSGTGEKPYKC--NECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCSCBC--SSSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCcCCCCCcCeEC--CCCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            4556666666666  66666666666666666666666666665

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.1e-13  Score=70.54  Aligned_cols=43  Identities=42%  Similarity=0.703  Sum_probs=28.9

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPG  162 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  162 (175)
                      |+++|.+++||.|  ++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            3 SGSSGTGEKPYNC--EECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             SSSSSSCCCSEEC--TTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCcCcCCCcCccC--CCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            4556666667777  667777777777777777777666666653

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.32  E-value=1.1e-13  Score=74.13  Aligned_cols=52  Identities=15%  Similarity=0.246  Sum_probs=45.3

Q ss_pred             ccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCcccc
Q psy8966         106 EKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAE  159 (175)
Q Consensus       106 ~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  159 (175)
                      ++.|....+|..|+++|++++||.|  ++|++.|...+.|..|+++|+++.||.
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATC--PICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEEC--TTTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             ccccCCCcchhhHHHhcCCCCCccC--CCCCcccCCHHHHHHHHHHhccCCCCC
Confidence            3567777788889999999999999  889999999999999999999998874

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=2.5e-13  Score=70.21  Aligned_cols=43  Identities=40%  Similarity=0.653  Sum_probs=30.4

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPG  162 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  162 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|+.
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            3 SGSSGTGEKPYEC--SDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCSSCC--SSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             cccCCCCCCCcCC--CCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5566667777777  667777777777777777777777777753

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.8e-13  Score=70.76  Aligned_cols=42  Identities=33%  Similarity=0.565  Sum_probs=26.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            3 SGSSGTGERHYEC--SECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCCEEC--SSSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             cccCcCCCCCeEC--CcCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4455666666666  55666666666666666666666666665

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=1.9e-13  Score=70.70  Aligned_cols=42  Identities=40%  Similarity=0.785  Sum_probs=28.6

Q ss_pred             hhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       120 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      ++|++++||.|  ++|++.|.....|.+|+++|++++||.|++|
T Consensus         5 ~~h~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            5 SSGTGEKPYKC--DVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSTTCCSEEC--SSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCeeC--cccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            45566667777  6677777777777777777777777777665

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.1e-13  Score=70.53  Aligned_cols=42  Identities=36%  Similarity=0.657  Sum_probs=29.7

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|+++.||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            3 SGSSGTGEKPYKC--NECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCSCCCTTCC--SSSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCcCCCCCcCeEC--CCCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            4556667777777  66777777777777777777777777765

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.2e-13  Score=70.41  Aligned_cols=43  Identities=40%  Similarity=0.672  Sum_probs=28.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPG  162 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  162 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|++++||.|++
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            3 SGSSGTGEKPFEC--SECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCSEEC--SSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCcCC--CCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            4556666667777  667777777777777777777666666653

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.3e-13  Score=70.38  Aligned_cols=42  Identities=31%  Similarity=0.548  Sum_probs=28.4

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            3 SGSSGTGENPFIC--SECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCSCCSCBC--TTTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCEEC--CccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4556666666777  66777777777777777777766666665

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3.2e-13  Score=69.84  Aligned_cols=43  Identities=30%  Similarity=0.557  Sum_probs=29.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCc
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPG  162 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  162 (175)
                      |+++|.+++||.|  ++|++.|..+..|..|+++|++++||.|+.
T Consensus         3 h~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            3 SGSSGAGKKLFKC--NECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSSCCSSCCCBC--TTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCEEC--CccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4556666777777  667777777777777777777777777653

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.2e-13  Score=70.44  Aligned_cols=42  Identities=38%  Similarity=0.592  Sum_probs=30.0

Q ss_pred             hhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       120 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      ++|.+++||.|  ++|++.|.....|..|+++|++++||.|++|
T Consensus         5 ~~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            5 SSGEGEKPYQC--SECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSCSCCCTTCC--SSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCeeC--CCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            45666777777  6677777777777777777777777777765

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.8e-13  Score=70.07  Aligned_cols=42  Identities=36%  Similarity=0.702  Sum_probs=28.4

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYEC--KECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCC--SSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCC--CCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4556666667777  66777777777777777777766666665

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.2e-13  Score=70.42  Aligned_cols=42  Identities=36%  Similarity=0.688  Sum_probs=27.3

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            3 SGSSGTGGKPYQC--NECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSSSSCSSSC--CSSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             cccccCCCCCeEC--CCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4555666666666  66666666666666666666666666665

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=3e-13  Score=69.19  Aligned_cols=42  Identities=43%  Similarity=0.703  Sum_probs=28.9

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|+++.||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            3 SGSSGTGEKPYEC--NECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CSSCCSCCCSEEC--TTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CccCCCCCCCeEC--CCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4556666777777  66777777777777777777777777664

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.31  E-value=2.6e-13  Score=70.16  Aligned_cols=42  Identities=36%  Similarity=0.690  Sum_probs=25.9

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|.+|+++|+++.||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yth_A            3 SGSSGSGEKPFQC--EECGKRFTQNSHLHSHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCSSSBCC--SSSCCCBSSHHHHHHHGGGGTTCCCSSCC
T ss_pred             cccCCCCCcCCCC--CCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            4455566666666  55666666666666666666666666664

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.9e-13  Score=69.99  Aligned_cols=42  Identities=31%  Similarity=0.548  Sum_probs=26.4

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|+++++|.|  ++|++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            3 SGSSGTGERHYEC--SECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCSCSSCCCEEC--SSSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCcccCCCCCCCC--CCCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            4455666666666  55666666666666666666666666664

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.8e-13  Score=70.04  Aligned_cols=42  Identities=38%  Similarity=0.676  Sum_probs=29.3

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|+++.||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            3 SGSSGTGEKPYSC--NVCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             SCCCCSSCCSEEE--TTTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             ccccCCCCCCeEC--cccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5556666777777  66777777777777777777777777765

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.2e-13  Score=70.42  Aligned_cols=42  Identities=40%  Similarity=0.670  Sum_probs=25.4

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|+++.||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~p~~C~   44 (46)
T 2yts_A            3 SGSSGTGEKPYIC--NECGKSFIQKSHLNRHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCSCCSEEC--SSSCCEESSHHHHHHHGGGTSSCCSSCCC
T ss_pred             CCCCCCCCcCEEC--CCCChhhCChHHHHHHHHhcCCCCCcCCC
Confidence            4455556666666  55666666666666666666666666654

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.9e-13  Score=70.02  Aligned_cols=42  Identities=38%  Similarity=0.669  Sum_probs=28.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|.+++||.|  ++|++.|.....|.+|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            3 SGSSGMGEKCYKC--DVCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCSCCCCCCCCBC--SSSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CccccCCCCCeEC--CCCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4556666666666  66666666666666666666666666665

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.9e-13  Score=69.96  Aligned_cols=42  Identities=36%  Similarity=0.681  Sum_probs=29.4

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            3 SGSSGTGEKPYKC--NECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCCC--TTTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             cccccCCCCCeEC--CcCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5556666777777  66777777777777777777777777765

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.8e-13  Score=69.34  Aligned_cols=42  Identities=38%  Similarity=0.611  Sum_probs=30.3

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|+++.||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            3 SGSSGTGMKPYVC--NECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             SCCCSSSSSSSCC--TTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCcCCCCCcCeEC--CCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            5566677777777  66777777777777777777777777764

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=2.2e-13  Score=70.47  Aligned_cols=42  Identities=36%  Similarity=0.728  Sum_probs=26.0

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            3 SGSSGTGEKPYKC--QVCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CSSSCSSCCSCBC--SSSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCcccCC--CCCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            3445566666666  55666666666666666666666666665

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=4e-13  Score=68.01  Aligned_cols=41  Identities=32%  Similarity=0.577  Sum_probs=28.4

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV  160 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  160 (175)
                      |+++|.+++||.|  ++|++.|..+..|.+|+++|+++.||.|
T Consensus         1 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSC--AECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBC--TTTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeEC--CCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            3455666777777  6677777777777777777777777766

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=3.2e-13  Score=69.81  Aligned_cols=42  Identities=36%  Similarity=0.665  Sum_probs=27.2

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            3 SGSSGTGEKPYKC--SDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCSCCCEEC--SSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             cccccCCCCCEEC--cccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4555666666666  66666666666666666666666666664

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=2.6e-13  Score=69.44  Aligned_cols=42  Identities=33%  Similarity=0.588  Sum_probs=29.7

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|+++.||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            3 SGSSGTGENPYEC--CECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             SCCSSSSCCSCEE--TTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CccccCCCcCeeC--CCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            5566677777777  66777777777777777777777777764

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.29  E-value=3.2e-13  Score=69.81  Aligned_cols=42  Identities=40%  Similarity=0.722  Sum_probs=26.2

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|..+..|..|+++|++++||.|+
T Consensus         3 H~~~H~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            3 SGSSGTGEKPYRC--GECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCEEC--SSSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CccCCCCCCCeEC--CCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4455566666666  55666666666666666666666666664

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.28  E-value=4.2e-13  Score=68.67  Aligned_cols=42  Identities=29%  Similarity=0.539  Sum_probs=29.2

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|.+++||.|  ++|++.|.....|..|+++|++++||.|.
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            3 SGSSGAGENPFKC--SKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CSCCCSCCCSEEC--SSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CccccCCCCCeEC--CCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            5556667777777  66777777777777777777777777663

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.28  E-value=6.2e-13  Score=69.40  Aligned_cols=41  Identities=27%  Similarity=0.424  Sum_probs=24.8

Q ss_pred             hcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcch
Q psy8966         122 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSI  164 (175)
Q Consensus       122 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~  164 (175)
                      +.++++|.|  ++|++.|.....|.+|+++|++++||.|++|+
T Consensus         7 ~~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            7 GRTRKQVAC--EICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCCSEEE--TTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCCcCeeC--CCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            344556666  55666666666666666666666666666665

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=3.8e-13  Score=69.55  Aligned_cols=42  Identities=29%  Similarity=0.432  Sum_probs=28.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcC-CccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG-KYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~  161 (175)
                      |+++|.+++||.|  ++|++.|.....|..|+++|++ ++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~   45 (46)
T 2eoy_A            3 SGSSGQKEKCFKC--NKCEKTFSCSKYLTQHERIHTRGVKSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCEEC--SSSCCEESSSHHHHHHHTTCCSCCTTSSSC
T ss_pred             CccccCCCCCEEC--cCCCCcCCCHHHHHHHHHHcCCCCCCCCCC
Confidence            4556666666667  6677777666667677666666 6666665

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=4.3e-13  Score=68.62  Aligned_cols=42  Identities=24%  Similarity=0.398  Sum_probs=25.0

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|.+++||.|  ++|++.|.....|..|+++|+++.||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            3 SGSSGHTRKRYEC--SKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCSCCCCCSSEEC--TTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             cccccCCCCCeEC--CCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4455555666666  55666666666666666666666666553

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.27  E-value=7e-13  Score=67.84  Aligned_cols=42  Identities=21%  Similarity=0.335  Sum_probs=29.7

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|.+++||.|  ++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~h~~~~~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSEC--QECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCC--TTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeEC--CCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            4456667777777  66777777777777777777777777764

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.27  E-value=1.8e-12  Score=81.94  Aligned_cols=81  Identities=17%  Similarity=0.314  Sum_probs=66.3

Q ss_pred             CCccCCCccchhhcc------ChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhc
Q psy8966          10 RPYKCPVEYCEKAFS------TQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVR   83 (175)
Q Consensus        10 ~~~~C~~~~C~~~f~------~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~   83 (175)
                      +++.|.  .|+..|.      ....|..|+ .|.++++|.|..  |++.|.....|..|+++|                 
T Consensus        40 ~~~~c~--~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~--C~k~f~~~~~l~~H~~~H-----------------   97 (129)
T 2wbt_A           40 KRLIRA--IVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPL--CLMPFSSSVSLKQHIRYT-----------------   97 (129)
T ss_dssp             HHHHHH--HHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTT--TCCEESSHHHHHHHHHHT-----------------
T ss_pred             Ccccch--hhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCC--CCcccCCHhHHHHHHHHC-----------------
Confidence            446665  6766665      566666676 688899999955  999999999999998876                 


Q ss_pred             ccchhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCC
Q psy8966          84 EDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE  125 (175)
Q Consensus        84 ~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  125 (175)
                                 ++||.|+  .|++.|...++|..|+++|+++
T Consensus        98 -----------~~~~~C~--~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           98 -----------EHTKVCP--VCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             -----------CCCCBCT--TTCCBCSSHHHHHHHHHHTTCC
T ss_pred             -----------CCCCCCC--CCCcccCCHHHHHHHHHHHCCc
Confidence                       3478996  8999999999999999999875

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.27  E-value=4.4e-13  Score=69.28  Aligned_cols=42  Identities=26%  Similarity=0.597  Sum_probs=28.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|.+++||.|  ++|++.|.....|..|+++|++++||.|+
T Consensus         3 h~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            3 SGSSGSGERPFKC--NECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCSCSSCCCSCCC--SSSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCcCCCCCCCeEC--CCCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4556666677777  66777777777777777777777777665

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.27  E-value=5.7e-13  Score=67.44  Aligned_cols=41  Identities=32%  Similarity=0.540  Sum_probs=27.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV  160 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  160 (175)
                      |+++|.+++||.|  ++|++.|..+..|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C--~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLC--GQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEEC--SSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeEC--CCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            3455666666666  6677766666666667666666666665

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.5e-13  Score=68.27  Aligned_cols=41  Identities=37%  Similarity=0.643  Sum_probs=26.8

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV  160 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  160 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKC--ETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEEC--TTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeC--CCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            3455666666666  6666666666666666666666666665

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=4.2e-12  Score=65.47  Aligned_cols=45  Identities=36%  Similarity=0.432  Sum_probs=41.6

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCN--ECGKSFIQSAHLIQHQRIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECS--SSCCEESSHHHHHHHHHHHSCCCTTSS--SCC
T ss_pred             CCcCCcCCCCCeeCC--CCChhhCCHHHHHHHHHHhCCCCCCCC--CCC
Confidence            367788999999997  899999999999999999999999999  777

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=4e-13  Score=69.44  Aligned_cols=42  Identities=33%  Similarity=0.553  Sum_probs=29.5

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            3 SGSSGTGEKPFQC--KECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCSCCCCSEEC--SSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             cccccCCCCCeeC--cccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5556667777777  66777777777777777777777777765

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.6e-13  Score=68.90  Aligned_cols=41  Identities=37%  Similarity=0.744  Sum_probs=26.7

Q ss_pred             HhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         119 IRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       119 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      +++|++++||.|  ++|++.|..+..|.+|+++|++++||.|+
T Consensus         4 ~~~h~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            4 GSSGTGEKPYEC--DVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSSCBC--TTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCcCCCCCcCC--CCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            445666666666  66666666666666666666666666664

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.26  E-value=4.4e-12  Score=65.45  Aligned_cols=45  Identities=38%  Similarity=0.523  Sum_probs=41.4

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||+|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECK--ECGKAFSQTTHLIQHQRVHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCS--SSCCBCSCHHHHHHHHHHHSSCCCSSC--CCC
T ss_pred             CCCCccCCCCceECC--CCCchhCCHHHHHHHHHHcCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.9e-12  Score=65.61  Aligned_cols=45  Identities=33%  Similarity=0.482  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCT--TTCCBCSSHHHHHHHGGGTSCCCCCSC--CCC
T ss_pred             CCCcCCCCCcCeECC--CCCCeeCCHHHHHHHhhhcCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.26  E-value=4.6e-12  Score=65.33  Aligned_cols=45  Identities=33%  Similarity=0.459  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCN--ECGKVFSRNSQLSQHQKIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECS--SSCCEESSHHHHHHHHTGGGCCCCCSS--SCC
T ss_pred             CCccCCCCCcCcCCC--CCcchhCCHHHHHHHHHhcCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=3.3e-13  Score=68.32  Aligned_cols=41  Identities=41%  Similarity=0.783  Sum_probs=27.9

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV  160 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  160 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRC--DQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCC--TTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeC--CCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            4556666677777  6677777777777777777777766665

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=6e-13  Score=69.37  Aligned_cols=42  Identities=33%  Similarity=0.646  Sum_probs=26.0

Q ss_pred             hhhcCCCcccCCcc--cchHHHhchhhHHHHHHHhcCCccccCCcc
Q psy8966         120 RTHTGEKPYRCAHE--FCSKSFKTSGDLQKHVRTHTGKYTAEVPGS  163 (175)
Q Consensus       120 ~~h~~~~~~~C~~~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c  163 (175)
                      ++|++++||.|  .  +|++.|..+..|.+|+++|++++||.|+.|
T Consensus         5 ~~H~~~k~~~C--~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            5 SSGTGEKPFAC--TWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CSSCCCCCEEC--CSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCcCCCCCeEC--CCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            44556666666  5  566666666666666666666666666655

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=4.6e-12  Score=65.33  Aligned_cols=45  Identities=36%  Similarity=0.559  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECS--VCGKAFSHRQSLSVHQRIHSGKKPSGP--SSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECS--SSCCEESSHHHHHHHHGGGSSCCCSCS--SCC
T ss_pred             CccCCcCCCCCeeCC--CcCCccCCHHHHHHHHHHhcCCCCCCC--CCC
Confidence            367788999999997  899999999999999999999999999  777

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.26  E-value=5.2e-13  Score=68.98  Aligned_cols=42  Identities=38%  Similarity=0.661  Sum_probs=27.6

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|++++||.|+
T Consensus         3 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            3 SGSSGTGEKPYEC--NQCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCSSCCCCSSEE--TTTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             cccCCCCCCCeEC--CCCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4555666666666  66666666666666666666666666664

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.5e-12  Score=65.38  Aligned_cols=45  Identities=38%  Similarity=0.535  Sum_probs=41.6

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCN--ECGKVFTQNSHLTNHWRIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECS--SSCCEESSHHHHHHHHHHHSSSSCSSC--CCC
T ss_pred             CCcccCCCCCCEeCC--cCCCccCCHHHHHHHHHHHCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  877

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=4.5e-13  Score=67.87  Aligned_cols=41  Identities=37%  Similarity=0.700  Sum_probs=26.2

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV  160 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  160 (175)
                      |+++|.+++||.|  ++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPC--EICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCC--SSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEEC--CCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            3455666666666  6666666666666666666666666655

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.4e-12  Score=65.08  Aligned_cols=45  Identities=29%  Similarity=0.423  Sum_probs=41.4

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...++|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICA--ECGKAFTIRSNLIKHQKIHTKQKPSGP--SSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECS--SSCCEESSHHHHHHHHHHTSCCCCSSC--SCC
T ss_pred             CcccCCCCCcCeECC--CCChhhCCHHHHHHHHHHcCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  776

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.8e-12  Score=65.25  Aligned_cols=45  Identities=38%  Similarity=0.518  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||+|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCN--ECGKAFSVYSSLTTHQVIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECS--SSCCEESCHHHHHHHHHHHHCCSCCSC--CCC
T ss_pred             CcccccCCCcCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCC--CCC
Confidence            367788999999997  899999999999999999999999999  777

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=4.9e-12  Score=64.58  Aligned_cols=44  Identities=36%  Similarity=0.501  Sum_probs=40.5

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      |++.|.+++||.|+  .|++.|...++|..|+++|++++||.|  ++|
T Consensus         1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCS--CCEKAFSSKSYLLVHQQTHAEEKPSGP--SSG   44 (44)
T ss_dssp             CCCCCSSCCCEECS--SSSCEESSHHHHHHHHHHHTSSCSCSC--CCC
T ss_pred             CCCCcCCCcCccCC--CCCcccCCHHHHHHHHHHhCCCCCCCC--CCC
Confidence            45678889999997  899999999999999999999999999  777

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.25  E-value=4.4e-12  Score=65.41  Aligned_cols=45  Identities=29%  Similarity=0.403  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCR--ECDMCFSQASSLRLHQNVHVGEKPSGP--SSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCS--SSCCCCSSHHHHHHHGGGGSSSSCSCS--SCC
T ss_pred             CCcCccCCCcCeECC--CCCcccCCHHHHHHHHHHcCCCCCcCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.25  E-value=4.3e-12  Score=65.43  Aligned_cols=45  Identities=33%  Similarity=0.533  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||+|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCS--QCAKTFSLKSQLIVHQRSHTGVKPSGP--SSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECS--SSSCEESSHHHHHHHGGGSSSCCCSCC--TTC
T ss_pred             ccccCCCCCCceECC--CCCchhCCHHHHHHHHHHhCCCCCCCC--CCC
Confidence            467788999999997  899999999999999999999999999  777

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.6e-12  Score=65.35  Aligned_cols=45  Identities=36%  Similarity=0.524  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C--~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICT--VCGKAFTDRSNLIKHQKIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECT--TTCCEESSHHHHHHHHHHHHCSSCSSS--CCC
T ss_pred             CCCCCCCCCCCcCCC--CCCchhCCHHHHHHHHHhcCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.1e-12  Score=65.15  Aligned_cols=45  Identities=31%  Similarity=0.539  Sum_probs=41.4

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECS--ICGKSFTKKSQLHVHQQIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECS--SSCCEESSHHHHHHHHHTTSSCCSCCS--CCC
T ss_pred             CCCCCCCCCcCcCCC--CCCcccCCHHHHHHHHHHhCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.1e-12  Score=65.15  Aligned_cols=45  Identities=40%  Similarity=0.600  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECH--ECGKAFSRKYQLISHQRTHAGEKPSGP--SSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECS--SSCCEESSHHHHHHHHHHHTTSCCSCS--SCC
T ss_pred             CCCCCCCCCcCcCCC--CCCcccCcHHHHHHHHHHcCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.2e-12  Score=65.16  Aligned_cols=45  Identities=29%  Similarity=0.441  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C--~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECT--ECGKAFTRKSTLSMHQKIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECS--SSCCEESCHHHHHHHGGGTSCSSCSCC--CCC
T ss_pred             ccccccCCCCCeECC--CCCchhCCHHHHHHHHHHhCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.9e-12  Score=65.24  Aligned_cols=45  Identities=36%  Similarity=0.500  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCN--ECGKVFRHNSYLSRHQRIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECS--SSCCEESSHHHHHHHHTTTCCCCCCSC--CCC
T ss_pred             CcccCCCCCCCeECC--CCCchhCChHHHHHHHhhcCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6.2e-12  Score=64.87  Aligned_cols=44  Identities=30%  Similarity=0.418  Sum_probs=41.0

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      |++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         3 h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCE--DCGKGYNRRLNLDMHQRVHMGEKTSGP--SSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCS--SSCCBCSSHHHHHHHGGGGGSCCCCCS--CCC
T ss_pred             CCCCCCCCCCeeCc--ccCchhCCHHHHHHHHHhcCCCCCCCC--CCC
Confidence            56788899999997  899999999999999999999999999  777

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.6e-12  Score=64.99  Aligned_cols=45  Identities=29%  Similarity=0.437  Sum_probs=41.3

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCD--ICGKSFCGRSRLNRHSMVHTAEKPSGP--SSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCS--SSCCCCSSHHHHHHHHHHTTCCCSSSC--CCC
T ss_pred             CCCCCCCCCCCcCCC--cCCchhCCHHHHHHHHHHcCCCCCCCC--CCC
Confidence            366788899999997  899999999999999999999999999  777

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6.3e-12  Score=64.82  Aligned_cols=45  Identities=36%  Similarity=0.504  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCS--ECGKAFHRHTHLNEHRRIHTGYRPSGP--SSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECS--SSCCEESSHHHHHHHHHHHTCCCSSCS--SCC
T ss_pred             CCccccCCCcCeECC--CCCCeeCChHHHHHHHHHcCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=7.9e-12  Score=64.41  Aligned_cols=44  Identities=32%  Similarity=0.454  Sum_probs=41.3

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH   46 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~   46 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCK--ECGKSFSRAPCLLKHERLHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSSCCCCCCBT--TTTBCCSCHHHHHHHHHHCCSSSCCCCCC
T ss_pred             CCcccCCCCCCeECC--CCCCccCchHHHHHHHHhcCCCCCCCCCC
Confidence            489999999999998  99999999999999999999999999954

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5e-12  Score=65.19  Aligned_cols=45  Identities=33%  Similarity=0.457  Sum_probs=41.3

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C--~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCH--ECGKVFRRNSHLARHQLIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECT--TTCCEESSHHHHHHHHTTTCCCCCSCC--SCC
T ss_pred             CCCcCCCCCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCC--CCC
Confidence            356778899999997  899999999999999999999999999  777

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=5.2e-12  Score=65.15  Aligned_cols=45  Identities=27%  Similarity=0.365  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...++|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCH--ECGRGFTLKSHLNQHQRIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECS--SSCCEESSHHHHHHHHTTTSCSCCSSC--CCC
T ss_pred             CCcCCCCCCCCeECC--cCCCccCCHHHHHHHHHHhCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=7.2e-12  Score=64.55  Aligned_cols=45  Identities=40%  Similarity=0.558  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCD--YCGKAFGLSAELVRHQRIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECS--SSCCEESSHHHHHHHHGGGCCCSCCSS--CCC
T ss_pred             CCCCCCCCCCCeECC--CCChhhCCHHHHHHHHHhcCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.6e-12  Score=65.04  Aligned_cols=45  Identities=29%  Similarity=0.374  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  +.|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCN--ECGKNFGRHSHLIEHLKRHFREKSSGP--SSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECS--SSCCEESSHHHHHHHHHHHHSTTSSCC--SCC
T ss_pred             CCCCCCCCCCCEEcc--ccCcccCCHHHHHHHHHHHcCCCCCCC--CCC
Confidence            367788999999997  899999999999999999999999999  777

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.24  E-value=1.2e-11  Score=70.12  Aligned_cols=63  Identities=41%  Similarity=0.677  Sum_probs=53.8

Q ss_pred             cccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHh
Q psy8966           4 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH   66 (175)
Q Consensus         4 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   66 (175)
                      ...+..++|.|....|++.|.....|..|+++|.++++|.|..+.|++.|.....|..|+++|
T Consensus        10 ~~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           10 IDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CCccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            456678899997223999999999999999999999999994224999999999999998764

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=6.4e-12  Score=64.78  Aligned_cols=44  Identities=34%  Similarity=0.483  Sum_probs=41.0

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      |++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCE--ECGKGFICRRDLYTHHMVHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCSSSCCCSEECS--SSCCEESCHHHHHHHGGGGTTCCCSST--TCC
T ss_pred             CCCCCCCCcCccCC--CccchhCCHHHHHHHHHHhCCCCCCCC--CCC
Confidence            66788899999997  899999999999999999999999999  777

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.24  E-value=6.4e-12  Score=64.76  Aligned_cols=45  Identities=31%  Similarity=0.459  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||+|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCK--ECGKSFRWASCLLKHQRVHSGEKPSGP--SSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECS--SSCCEESSHHHHHHHGGGGTSCCCCST--TCC
T ss_pred             CCCCCCCCCcCeECC--ccccccCChHHHHHHHHHhCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.24  E-value=1.3e-13  Score=76.07  Aligned_cols=48  Identities=21%  Similarity=0.531  Sum_probs=22.6

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhch
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTS  142 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~  142 (175)
                      |++.|.+++||.|+  .|++.|.....|.   .+|.+++||.|  ++|++.|...
T Consensus         5 h~~~H~~~k~~~C~--~C~k~F~~~~~l~---~~H~~~k~~~C--~~C~k~f~~~   52 (62)
T 1vd4_A            5 DERDSTNRASFKCP--VCSSTFTDLEANQ---LFDPMTGTFRC--TFCHTEVEED   52 (62)
T ss_dssp             CSSSCCSSSEEECS--SSCCEEEHHHHHH---HEETTTTEEBC--SSSCCBCEEC
T ss_pred             HHHHcCCCCCccCC--CCCchhccHHHhH---hhcCCCCCEEC--CCCCCccccC
Confidence            44444445555553  4555554444443   44444455555  4455544443

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.24  E-value=7.8e-12  Score=64.47  Aligned_cols=44  Identities=34%  Similarity=0.564  Sum_probs=41.3

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH   46 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~   46 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ely_A            2 SSGSSGTGEKPFKCV--ECGKGFSRRSALNVHHKLHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSBCCS--SSCCCBSSTTHHHHHHHHHSCCSSCSCCC
T ss_pred             CCCCCCCCCCCcccC--ccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            489999999999998  99999999999999999999999999954

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.4e-12  Score=65.04  Aligned_cols=45  Identities=31%  Similarity=0.409  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...++|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECR--ECGKSFSFNSQLIVHQRIHTGENPSGP--SSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCT--TTCCBCSSHHHHHHHHTTTTTSCCSCC--CCC
T ss_pred             CCccccCCCCCeeCC--CCCchhCCHHHHHHHHHHcCCCCCCCC--CCC
Confidence            467788999999997  899999999999999999999999999  777

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.23  E-value=2.6e-12  Score=65.36  Aligned_cols=40  Identities=18%  Similarity=0.436  Sum_probs=28.8

Q ss_pred             hhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCc
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPG  162 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  162 (175)
                      +|++++||.|  ++|++.|.....|..|+++|++++||.|++
T Consensus         4 ~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFC--NECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCC--SSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEEC--CCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4566777777  667777777777777777777777777753

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=1.1e-11  Score=63.90  Aligned_cols=44  Identities=30%  Similarity=0.511  Sum_probs=41.2

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH   46 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~   46 (175)
                      .|+++|++++||.|.  .||+.|.....|.+|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eov_A            2 SSGSSGTGEKPYKCS--DCGKSFTWKSRLRIHQKCHTGERHSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSCBCS--SSCCBCSSHHHHHHHHHHHSCCSSCCSCC
T ss_pred             CCCCCCCCCCCccCC--ccChhhCCHHHHHHHHHhcCCCCCCCCCC
Confidence            489999999999998  99999999999999999999999999954

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=7.1e-12  Score=64.62  Aligned_cols=45  Identities=38%  Similarity=0.559  Sum_probs=41.4

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCS--ECGKAFSSKSYLIIHMRTHSGEKPSGP--SSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCS--SSCCBCSCHHHHHHHHTTTCCSCSSCC--CCC
T ss_pred             CCCcCcCCCCCcCCC--ccChhhCChHHHHHHHHHhCCCCCCCC--CCC
Confidence            366788899999997  899999999999999999999999999  777

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=9.2e-12  Score=64.16  Aligned_cols=44  Identities=41%  Similarity=0.597  Sum_probs=41.3

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH   46 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~   46 (175)
                      .|+++|++++||.|.  .|++.|....+|..|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCN--ECGKAFSQTSKLARHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSCCCSSCCTTCCT--TTCCCCSSHHHHHHHHTTTTTCSCCCSCC
T ss_pred             CCCcCCCCCcCcCCC--CCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            489999999999998  99999999999999999999999999954

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=7.3e-12  Score=64.57  Aligned_cols=45  Identities=36%  Similarity=0.534  Sum_probs=41.5

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCE--ECGKRFTQNSQLHSHQRVHTGEKPSGP--SSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEET--TTTEEESSHHHHHHHGGGGSCCCCSCC--CCC
T ss_pred             CcccCCCCCCCeeCC--CCCcccCCHHHHHHHHHHcCCCCCCCC--CCC
Confidence            367788999999997  899999999999999999999999999  777

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.1e-12  Score=64.85  Aligned_cols=45  Identities=29%  Similarity=0.332  Sum_probs=41.4

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCT--ECGKAFCWKSQLIMHQRTHVDDKHSGP--SSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECS--SSCCEESSSHHHHHHHHHCCSCCCSCC--CCC
T ss_pred             cCcccCCCCCCeeCC--CCCCccCCHHHHHHHHHHhCCCCCCCC--CCC
Confidence            366788899999997  899999999999999999999999999  777

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.22  E-value=2.3e-11  Score=72.63  Aligned_cols=68  Identities=31%  Similarity=0.430  Sum_probs=52.3

Q ss_pred             CeeccccccCcccCChHHHHHHHHH-hcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcccccCCHHHHHHHH
Q psy8966          41 PYRCAHEFCSKSFKTSGDLQKHVRT-HTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHI  119 (175)
Q Consensus        41 ~~~C~~~~C~~~f~~~~~l~~H~~~-h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~  119 (175)
                      .+.|..  |++.|.....|..|++. |.+..+....                  .-.+|.|+  .|++.|.....|..|+
T Consensus        25 ~~~C~~--C~k~f~~~~~L~~H~~~~H~~~~~~~~~------------------~c~~~~C~--~C~k~f~~~~~L~~H~   82 (95)
T 2ej4_A           25 SRPKKS--CDRTFSTMHELVTHVTMEHVGGPEQNNH------------------VCYWEECP--REGKSFKAKYKLVNHI   82 (95)
T ss_dssp             SSSCCC--CCCCCSSHHHHHHHHHHTTTCCTTCSCC------------------CCCCTTCS--STTCCCSSHHHHHHHH
T ss_pred             CCcccc--cccccCCHHHHHHHHHHhccCCCCCCcc------------------ceeccCCC--CCCcccCCHHHHHHHH
Confidence            367854  99999999999999887 6653211000                  01237886  8999999999999999


Q ss_pred             hhhcCCCcccC
Q psy8966         120 RTHTGEKPYRC  130 (175)
Q Consensus       120 ~~h~~~~~~~C  130 (175)
                      ++|++++||.|
T Consensus        83 ~~H~~~k~~~C   93 (95)
T 2ej4_A           83 RVHTGEKSGPS   93 (95)
T ss_dssp             HHHHTCCCCSS
T ss_pred             HhcCCCCCCCC
Confidence            99999999999

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=7.6e-15  Score=83.60  Aligned_cols=70  Identities=17%  Similarity=0.305  Sum_probs=52.6

Q ss_pred             HHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCCCCCCCCCCccchhcccchhhhhccCCcceeccCCCcc
Q psy8966          27 YSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIRPYKCPVEYCE  106 (175)
Q Consensus        27 ~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~~~C~  106 (175)
                      .+|..|+++|.++++|.|..  |++.|.+...|..                                 +++|.|+  .|+
T Consensus         4 ~~l~~H~~~h~~~~~~~C~~--C~k~f~~~~~l~~---------------------------------~~~~~C~--~C~   46 (73)
T 2ctu_A            4 GSSGKRQKIHLGDRSQKCSK--CGIIFIRRSTLSR---------------------------------RKTPMCE--KCR   46 (73)
T ss_dssp             CSCCCCCCCCCCCSEEECSS--SCCEEECCCCCCC---------------------------------SSSCCCH--HHH
T ss_pred             hhHHHHHHHhCCCCCeeCCc--ccchhCCHHHhCc---------------------------------CCCCCCC--CCC
Confidence            44566777777778888854  8888877655332                                 4578886  788


Q ss_pred             cccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966         107 KAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus       107 ~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      +.|...+.|..|+++|++++||.|  ++|
T Consensus        47 ~~f~~~~~l~~H~~~H~~~~~~~C--~~C   73 (73)
T 2ctu_A           47 KDSCQEAALNKDEGNESGKKTSGP--SSG   73 (73)
T ss_dssp             HTCSCCCSSCCCSSCCCCCCCSSC--CCC
T ss_pred             hhhcCHHHHHHHHHhhcCCCCCCC--CCC
Confidence            888888888888888888888888  766

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=9.7e-12  Score=64.05  Aligned_cols=44  Identities=34%  Similarity=0.538  Sum_probs=41.2

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH   46 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~   46 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLANHQRIHTGVKPSGPSS   45 (46)
T ss_dssp             CCSSCCCCCCSSEET--TTTEECSSHHHHHHHHGGGSCCCSCSSCC
T ss_pred             CCCCCCCCCCCeECC--CcChhhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            489999999999998  99999999999999999999999999954

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.2e-12  Score=65.12  Aligned_cols=45  Identities=33%  Similarity=0.492  Sum_probs=41.4

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLARHRRVHTGGKPSGP--SSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECS--SSCCEESSSHHHHHHTHHHHSCCCSCS--CCC
T ss_pred             CcCcCCCCCCCeECC--cCCchhCCHHHHHHHHHhcCCCCCCCC--CCC
Confidence            366788899999997  899999999999999999999999999  777

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.1e-11  Score=63.82  Aligned_cols=44  Identities=36%  Similarity=0.571  Sum_probs=41.2

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH   46 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~   46 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2epz_A            2 SSGSSGTGEKPFDCI--DCGKAFSDHIGLNQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCCCCSBCCT--TTCCCBSSHHHHHHHHTTTTTCCCCSSCC
T ss_pred             CCCCCcCCCCCeECC--CCCceeCCHHHHHHHHHHhCCCCCCCCCC
Confidence            489999999999998  99999999999999999999999999954

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=9.3e-12  Score=64.16  Aligned_cols=44  Identities=20%  Similarity=0.134  Sum_probs=41.0

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      |++.|.+++||.|+  .|++.|...+.|..|+++|++++||+|  ++|
T Consensus         3 H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCR--ECGEIFFQYVSLIEHQVLHMGQKNSGP--SSG   46 (46)
T ss_dssp             CSCCSSCCCCEECT--TTCCEESSHHHHHHHHHHHSCCSCCCT--TCC
T ss_pred             cccccCCCCCEEcc--ccChhhCCHHHHHHHHHHhCCCCCCCC--CCC
Confidence            56788899999997  899999999999999999999999999  777

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=7.1e-12  Score=64.62  Aligned_cols=45  Identities=42%  Similarity=0.549  Sum_probs=41.4

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~h~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCN--ECGKTFSQKSILSAHQRTHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEET--TTTEEESSHHHHHHHHHHHSSCCCSSS--CCC
T ss_pred             CCCCccCCCcCeECC--CCCcccCchHHHHHHHHHcCCCCCCCC--CCC
Confidence            366788999999997  899999999999999999999999999  777

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=9.5e-12  Score=64.11  Aligned_cols=44  Identities=36%  Similarity=0.539  Sum_probs=41.0

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      |++.|.+++||.|.  .|++.|...+.|..|+++|++++||+|  ++|
T Consensus         3 h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCE--ECGKGFYTNSQCYSHQRSHSGEKPSGP--SSG   46 (46)
T ss_dssp             CSSCCCCCCSEECS--SSCCEESSHHHHHHHHHHSCCSSCCSS--CCC
T ss_pred             CCCCCCCCCCcCCC--CCCCcCCChHHHHHHHHHhCCCCCCCC--CCC
Confidence            56788899999997  899999999999999999999999999  777

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.7e-13  Score=67.89  Aligned_cols=41  Identities=29%  Similarity=0.450  Sum_probs=29.1

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV  160 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  160 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|++++||.|
T Consensus         3 H~~~H~~~~~~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            3 SGSSGTDSKSYNC--NECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCEEE--TTTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCcCCCCCCCeEC--cccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            4556667777777  6677777777777777777777777766

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=1.1e-12  Score=67.48  Aligned_cols=41  Identities=41%  Similarity=0.875  Sum_probs=27.7

Q ss_pred             hhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCc
Q psy8966         120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPG  162 (175)
Q Consensus       120 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  162 (175)
                      .+|.+++||.|  ++|++.|.....|..|+++|++++||.|++
T Consensus         5 ~~h~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            5 SSGTGQKPFEC--THCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCSCCSEEE--TTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCcCccC--CCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            34566667777  667777777777777777777777776653

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.22  E-value=1e-11  Score=64.01  Aligned_cols=44  Identities=39%  Similarity=0.576  Sum_probs=40.9

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      |++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         3 h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCS--QCEKSFSGKLRLLVHQRMHTREKPSGP--SSG   46 (46)
T ss_dssp             SCCSSCCCCSEECS--SSSCEESSHHHHHHHHGGGCCSSCCSC--CCC
T ss_pred             CCCCCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCC--CCC
Confidence            56778899999997  899999999999999999999999999  777

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=8e-12  Score=64.40  Aligned_cols=45  Identities=33%  Similarity=0.533  Sum_probs=41.0

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCA--ECGKAFTDRSNLFTHQKIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECS--SSCCEESSHHHHHHHHTTTTTSCCCCT--TCC
T ss_pred             CCCCCCCCCCCeECC--CCCchhCCHHHHHHHHHHcCCCCCCCC--CCC
Confidence            367788999999997  899999999999999999999999999  664

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=3.1e-12  Score=66.03  Aligned_cols=40  Identities=30%  Similarity=0.537  Sum_probs=27.4

Q ss_pred             hhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCC
Q psy8966         120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVP  161 (175)
Q Consensus       120 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  161 (175)
                      ++|++++||.|  ++|++.|.....|..|+++|++++||.|+
T Consensus         5 ~~h~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            5 SSGHGERGHRC--SDCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCC--SSSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCcCC--CCCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            45566667777  66777777777777777777777777665

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=9.7e-12  Score=64.06  Aligned_cols=44  Identities=27%  Similarity=0.315  Sum_probs=41.2

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH   46 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~   46 (175)
                      +|+++|++++||.|.  .|++.|....+|..|+.+|.++++|.|..
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en8_A            2 SSGSSGSGEKSHTCD--ECGKNFCYISALRIHQRVHMGEKCSGPSS   45 (46)
T ss_dssp             CCCCCCCCCSSEECT--TTCCEESSHHHHHHHHTTTCCSCSSCCSC
T ss_pred             CccccCCCCCCeECC--CcCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            489999999999998  99999999999999999999999999954

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=9.6e-12  Score=64.12  Aligned_cols=44  Identities=34%  Similarity=0.468  Sum_probs=40.9

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      |++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         3 h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCV--ECGKGYKRRLDLDFHQRVHTGEKLSGP--SSG   46 (46)
T ss_dssp             CCCCCCSCCSEECS--SSCCEESSHHHHHHHHHHHHCCCCCCS--CCC
T ss_pred             CCCCCCCCCCeECc--ccCchhCCHHHHHHHHHHHcCCCCCCC--CCC
Confidence            56778899999997  899999999999999999999999999  777

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.7e-12  Score=64.71  Aligned_cols=44  Identities=30%  Similarity=0.605  Sum_probs=41.0

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      |++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         3 H~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C--~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCE--KCGKGYNSKFNLDMHQKVHTGERPSGP--SSG   46 (46)
T ss_dssp             CCCCCSSCCSEEET--TTTEEESCHHHHHHHHTTSCSCCSSCC--SCC
T ss_pred             CCcCCCCCCCeECC--CCCCccCCHHHHHHHHHhhCCCCCCCC--CCC
Confidence            66788899999997  899999999999999999999999999  777

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=1.8e-12  Score=66.26  Aligned_cols=41  Identities=37%  Similarity=0.555  Sum_probs=24.3

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV  160 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  160 (175)
                      |+++|++++||.|  ++|++.|...+.|..|+++|++++||.|
T Consensus         3 H~~~H~~~k~~~C--~~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            3 SGSSGSGEKPYEC--NECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCSEEC--SSSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCcccCCCcCeEC--CCCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            4455555666666  5566666666666666666666655554

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.2e-12  Score=65.14  Aligned_cols=45  Identities=31%  Similarity=0.510  Sum_probs=41.4

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCG--ECGKSYNQRVHLTQHQRVHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECT--TTCCEESSSHHHHTTGGGGSSCCSSCS--CCC
T ss_pred             CCCCCCCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCC--CCC
Confidence            367788899999997  899999999999999999999999999  777

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.8e-11  Score=63.07  Aligned_cols=44  Identities=36%  Similarity=0.576  Sum_probs=41.0

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH   46 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~   46 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|..
T Consensus         2 ~h~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCM--ECGKAFGDNSSCTQHQRLHTGQRPSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSSSBT--TTTBCCSSHHHHHHHHHHHHSCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCC--CCCchhCCHHHHHHHHHHcCCCCCCCCCC
Confidence            378999999999998  99999999999999999999999999954

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.7e-11  Score=63.16  Aligned_cols=45  Identities=38%  Similarity=0.572  Sum_probs=40.9

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      .|++.|.+++||.|.  .|++.|...+.|..|+++|++++||.|  ++|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCK--ECGKAFRQNIHLASHLRIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECS--SSCCEESSHHHHHHHHHHHCCCCSSCS--SCC
T ss_pred             CCCCCCCCCCCEECC--cCCchhCCHHHHHHHHHHhCCCCCCCC--CCC
Confidence            366788899999997  899999999999999999999999999  664

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.19  E-value=1.2e-11  Score=68.81  Aligned_cols=58  Identities=26%  Similarity=0.499  Sum_probs=52.5

Q ss_pred             cCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc-ccccCcccCChHHHHHHHHHhcCC
Q psy8966           6 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA-HEFCSKSFKTSGDLQKHVRTHTGK   69 (175)
Q Consensus         6 ~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~-~~~C~~~f~~~~~l~~H~~~h~~~   69 (175)
                      .-+++||.|.  .|++.|. ..+|..|+++ .++++|.|. .  |++.|.....|..|+++|.+.
T Consensus         5 ~C~~~~~~C~--~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~--C~k~f~~~~~L~~H~~~hc~~   63 (66)
T 2eod_A            5 SSGKRTQPCT--YCTKEFV-FDTIQSHQYQ-CPRLPVACPNQ--CGVGTVAREDLPGHLKDSCNT   63 (66)
T ss_dssp             CCCCCEEECS--SSCCEEE-HHHHHHHHHH-CSSSEEECTTC--CSCCEEETTTHHHHHHTTSSS
T ss_pred             cCCCCCeecc--ccCCccC-HHHHHHHHHH-cCCcCccCCcc--cCcccccHHHHHHHHHhhccc
Confidence            4578899998  9999999 9999999999 999999996 5  999999999999999988664

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.18  E-value=1.1e-11  Score=66.22  Aligned_cols=47  Identities=32%  Similarity=0.579  Sum_probs=42.9

Q ss_pred             hccCCcceeccCCCcccccCCHHHHHHHHh-hhcCCCcccCCcccchHHHhc
Q psy8966          91 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRCAHEFCSKSFKT  141 (175)
Q Consensus        91 ~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~~~C~~~f~~  141 (175)
                      .+.+++||.|+  .|++.|.....|..|++ +|.+++||.|  ++|++.|.+
T Consensus         6 ~~~~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~~k~~~C--~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKC--QVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECS--SSCCEESSHHHHHHHHHHTSCCCCCCCS--SSSCCSSCC
T ss_pred             CCCCCCCeECC--CCCcccCCHHHHHHHHHHhcCCCCCccC--CCCCCCCCC
Confidence            35678999997  89999999999999997 9999999999  889999875

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.18  E-value=1.9e-11  Score=61.69  Aligned_cols=42  Identities=36%  Similarity=0.536  Sum_probs=39.3

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      |+++|+++++|.|.  .|++.|....+|.+|+++|.++++|.|+
T Consensus         1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECS--ECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECS--SSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCC--CcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            78899999999998  9999999999999999999999999883

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.2e-11  Score=62.95  Aligned_cols=44  Identities=39%  Similarity=0.542  Sum_probs=41.1

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHh-hhcCCCCeeccc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRCAH   46 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~-~~~~~~~~~C~~   46 (175)
                      .|+++|++++||.|.  .|++.|....+|..|++ +|.++++|.|..
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~   46 (47)
T 2epx_A            2 SSGSSGTGKKPYECI--ECGKAFIQNTSLIRHWRYYHTGEKPSGPSS   46 (47)
T ss_dssp             CCCCCCCCCCSBCCS--SSCCCBSSHHHHHHHHTTTTTTSCSSSCCC
T ss_pred             ccccccCCCCCEECC--ccCchhCChHHHHHHhHhhcCCCCCCCCCC
Confidence            489999999999998  99999999999999999 999999999954

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=2.3e-11  Score=62.68  Aligned_cols=43  Identities=33%  Similarity=0.496  Sum_probs=40.7

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            2 SSGSSGSGKKPYECK--ECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCCSCCCSCSCCCS--SSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCCcCCCCCcCCC--CcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999996

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=2.4e-11  Score=61.23  Aligned_cols=41  Identities=27%  Similarity=0.421  Sum_probs=38.9

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      |+++|++++||.|.  .|++.|...++|.+|+.+|.++++|.|
T Consensus         1 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   41 (42)
T 2yte_A            1 GSSGSSGEKPYSCA--ECKETFSDNNRLVQHQKMHTVKSGPSS   41 (42)
T ss_dssp             CCSSSCSCCSCBCT--TTCCBCSSHHHHHHHHHHTSCCSSCCC
T ss_pred             CCcCcCCCCCeECC--CCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            68899999999998  999999999999999999999999987

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.16  E-value=2.4e-11  Score=62.55  Aligned_cols=42  Identities=36%  Similarity=0.587  Sum_probs=39.2

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                      .|++.|.+++||.|+  .|++.|.....|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2emj_A            2 SSGSSGTGEKPFECA--ECGKSFSISSQLATHQRIHTGEKPSGP   43 (46)
T ss_dssp             CCCCCCCCCCSEECS--SSSCEESSHHHHHHHHHHHTTSCSSSS
T ss_pred             CCCCCCCCCCCEECC--CCCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            367788899999997  899999999999999999999999999

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=2.5e-11  Score=62.50  Aligned_cols=43  Identities=37%  Similarity=0.553  Sum_probs=40.7

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      +|+++|++++||.|.  .|++.|....+|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytp_A            2 SSGSSGTGERHYECS--ECGKAFARKSTLIMHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCCEECS--SSCCEESSHHHHHHHHTTTSCCCCCSSC
T ss_pred             CcccCcCCCCCeECC--cCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999995

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=2.6e-11  Score=62.42  Aligned_cols=43  Identities=44%  Similarity=0.644  Sum_probs=40.6

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em4_A            2 SSGSSGTGQRPYECI--ECGKAFKTKSSLICHRRSHTGEKPSGPS   44 (46)
T ss_dssp             CSCCCCCCSSSEECS--SSCCEESSHHHHHHHHHHHSSSSCCCCC
T ss_pred             CCccccCCCcCcCCC--CCCCccCCHHHHHHHHHhcCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999995

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.15  E-value=5.5e-12  Score=63.37  Aligned_cols=38  Identities=37%  Similarity=0.706  Sum_probs=23.7

Q ss_pred             hhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV  160 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  160 (175)
                      +|++++||.|  ++|++.|.....|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYEC--QECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEEC--SSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeEC--CCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            4555666666  5566666666666666666666666655

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.4e-11  Score=61.96  Aligned_cols=43  Identities=35%  Similarity=0.534  Sum_probs=40.5

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|+++++|.|.  .|++.|....+|.+|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enf_A            2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLVRHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCSCBCS--SSCCBCSSHHHHHHHHTTTTTSSCCCCS
T ss_pred             CCCcCCCCCcCeECC--CCCcccCCHHHHHHHHHhhCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999985

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3e-11  Score=62.18  Aligned_cols=42  Identities=40%  Similarity=0.605  Sum_probs=39.1

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2eow_A            2 SSGSSGTGEKPYKCN--ECGKAFRARSSLAIHQATHSGEKPSGP   43 (46)
T ss_dssp             CCCCCSCCCCCEECT--TSCCEESSHHHHHHHHHHHCCCSCSCT
T ss_pred             CccCCCCCCCCeecc--ccCChhcCHHHHHHHHHHcCCCCCCCC
Confidence            366788899999997  899999999999999999999999999

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.15  E-value=3.3e-11  Score=62.06  Aligned_cols=42  Identities=36%  Similarity=0.592  Sum_probs=39.1

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (46)
T 2yth_A            2 SSGSSGSGEKPFQCE--ECGKRFTQNSHLHSHQRVHTGEKPSGP   43 (46)
T ss_dssp             CCCSCCCCSSSBCCS--SSCCCBSSHHHHHHHGGGGTTCCCSSC
T ss_pred             CcccCCCCCcCCCCC--CCCcccCCHHHHHHHHHhcCCCCCCCC
Confidence            366788899999997  899999999999999999999999999

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.14  E-value=3.3e-11  Score=61.40  Aligned_cols=43  Identities=23%  Similarity=0.425  Sum_probs=39.9

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|..|+.+|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCS--KCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECS--SSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECC--CCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            488999999999998  9999999999999999999999999883

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=3.4e-11  Score=61.94  Aligned_cols=42  Identities=38%  Similarity=0.596  Sum_probs=39.1

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                      .|++.|.+++||.|.  .|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~C   43 (46)
T 2eor_A            2 SSGSSGTGEKPYNCE--ECGKAFIHDSQLQEHQRIHTGEKPSGP   43 (46)
T ss_dssp             CSSSSSSCCCSEECT--TTCCEESSHHHHHHHHHHHHSCCCSSS
T ss_pred             CCCcCcCCCcCccCC--CCCCCcCCHHHHHHHHHhcCCCCCCCC
Confidence            367788899999997  899999999999999999999999999

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.9e-11  Score=61.59  Aligned_cols=42  Identities=29%  Similarity=0.465  Sum_probs=39.8

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      .|+++|++++||.|.  .|++.|....+|..|+.+|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eoj_A            2 SSGSSGTGENPYECC--ECGKVFSRKDQLVSHQKTHSGQSGPSS   43 (44)
T ss_dssp             CSCCSSSSCCSCEET--TTTEECSSHHHHHHHHTTSSSSCSCCC
T ss_pred             CCccccCCCcCeeCC--CCCCccCCHHHHHHHHHHcCCCCCCCC
Confidence            489999999999998  999999999999999999999999988

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=2.2e-11  Score=61.37  Aligned_cols=42  Identities=40%  Similarity=0.627  Sum_probs=39.3

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      .|+++|++++||.|.  .||+.|....+|..|+.+|.++++|.|
T Consensus         1 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            1 GSSGSSGGEKPYRCD--QCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCCSCCSBCCT--TTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CCccccCCCCCeeCC--CccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999998  999999999999999999999999887

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.5e-11  Score=61.90  Aligned_cols=42  Identities=36%  Similarity=0.549  Sum_probs=39.1

Q ss_pred             hhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          87 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        87 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                      .|++.|.+++||.|+  .|++.|...+.|..|+++|++++||.|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~p~~C   43 (46)
T 2yts_A            2 SSGSSGTGEKPYICN--ECGKSFIQKSHLNRHRRIHTGEKPSGP   43 (46)
T ss_dssp             CCSCCCCSCCSEECS--SSCCEESSHHHHHHHGGGTSSCCSSCC
T ss_pred             CCCCCCCCCcCEECC--CCChhhCChHHHHHHHHhcCCCCCcCC
Confidence            366788899999997  899999999999999999999999999

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.4e-11  Score=61.54  Aligned_cols=43  Identities=35%  Similarity=0.544  Sum_probs=40.5

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|+++++|.|.  .|++.|....+|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yti_A            2 SSGSSGTGEKPYKCN--ECGKVFTQNSHLARHRGIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSCCCTTCCS--SSCCCCSSHHHHHHHHTTTSCSCCSSTT
T ss_pred             CCCcCCCCCcCeECC--CCCcccCChhHHHHHhHhcCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999985

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.7e-11  Score=61.46  Aligned_cols=43  Identities=37%  Similarity=0.530  Sum_probs=40.5

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+.+|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2em6_A            2 SSGSSGMGEKCYKCD--VCGKEFSQSSHLQTHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCSCCCCCCCCBCS--SSCCBCSSHHHHHHHHTTTSSSCCCCTT
T ss_pred             CCccccCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999985

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.2e-11  Score=61.63  Aligned_cols=43  Identities=40%  Similarity=0.590  Sum_probs=40.6

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|+++++|.|.  .|++.|....+|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCN--ECGKAFSQTSKLARHQRVHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSSSSCSSSCC--SSCCCCSSHHHHHHHGGGGCCCCCCCCC
T ss_pred             CcccccCCCCCeECC--CCCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999985

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4e-11  Score=61.06  Aligned_cols=42  Identities=38%  Similarity=0.596  Sum_probs=39.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      .|+++|+++++|.|.  .|++.|....+|..|+.+|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eof_A            2 SSGSSGTGEKPYECN--ECQKAFNTKSNLMVHQRTHTGESGPSS   43 (44)
T ss_dssp             CCSSCCSCCCSEECT--TTCCEESCHHHHHHHHHHTTTSSCSCC
T ss_pred             CCccCCCCCCCeECC--CCCcccCCHhHHHHHHHHhCCCCCCCC
Confidence            488999999999998  999999999999999999999999988

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=5.4e-11  Score=61.17  Aligned_cols=43  Identities=33%  Similarity=0.573  Sum_probs=40.5

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|+++++|.|.  .|++.|....+|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ep1_A            2 SSGSSGTGEKPYECS--DCGKSFIKKSQLHVHQRIHTGENPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSSCCS--SSCCCCSSHHHHHHHHGGGSSSCCCSSS
T ss_pred             ccccCCCCCCCcCCC--CCCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999984

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.6e-11  Score=61.47  Aligned_cols=43  Identities=35%  Similarity=0.529  Sum_probs=40.5

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|+++++|.|.  .|++.|....+|.+|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emi_A            2 SSGSSGTGERHYECS--ECGKAFIQKSTLSMHQRIHRGEKPSGPS   44 (46)
T ss_dssp             CCCCSCSSCCCEECS--SSCCEESSHHHHHHHHGGGCSCCCCSCC
T ss_pred             CCCcccCCCCCCCCC--CCCcccCCHHHHHHHHhHhCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999985

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.2e-11  Score=60.96  Aligned_cols=42  Identities=36%  Similarity=0.554  Sum_probs=39.7

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      .|+++|+++++|.|.  .|++.|....+|..|+++|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2en7_A            2 SSGSSGTGMKPYVCN--ECGKAFRSKSYLIIHTRTHTGESGPSS   43 (44)
T ss_dssp             CSCCCSSSSSSSCCT--TTCCCCSSHHHHHHHHTTTCCSSSSCC
T ss_pred             CCCcCCCCCcCeECC--CCCCccCCHHHHHHHhhhcCCCCCCCC
Confidence            488999999999998  999999999999999999999999988

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=4.7e-11  Score=61.44  Aligned_cols=43  Identities=37%  Similarity=0.632  Sum_probs=40.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2em3_A            2 SSGSSGTGEKPYECK--VCSKAFTQKAHLAQHQKTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCSSCCSEECS--SSCCEESSHHHHHHHHHHHCCCCCCCSC
T ss_pred             CCCCCCCCCcCeECC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            488999999999998  9999999999999999999999999985

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.8e-11  Score=61.80  Aligned_cols=43  Identities=40%  Similarity=0.575  Sum_probs=39.8

Q ss_pred             hhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          89 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        89 ~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      ++.|.+++||.|+  .|++.|.....|..|+++|++++||+|  ++|
T Consensus         4 ~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCD--VCHKSFRYGSSLTVHQRIHTGEKPSGP--SSG   46 (46)
T ss_dssp             CCSSTTCCSEECS--SSCCEESSHHHHHHHHTTTSSSCCCSC--CCC
T ss_pred             CCCCCCCCCeeCc--ccCcccCChHHHHHHHHHhCCCCCCCC--CCC
Confidence            5578889999997  899999999999999999999999999  777

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.13  E-value=3.7e-11  Score=61.85  Aligned_cols=43  Identities=33%  Similarity=0.555  Sum_probs=40.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCS--DCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECS--SSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECc--ccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999985

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.3e-11  Score=61.25  Aligned_cols=43  Identities=35%  Similarity=0.539  Sum_probs=40.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|+++++|.|.  .|++.|....+|..|+++|.++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2en9_A            2 SSGSSGAGKKLFKCN--ECKKTFTQSSSLTVHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCSSCCSSCCCBCT--TTCCBCSSHHHHHHHHHHHTSSCCCSCC
T ss_pred             CCCCCCCCCCCEECC--ccCcccCCHHHHHHHHHHcCCCCCCCCC
Confidence            488999999999998  9999999999999999999999999984

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.1e-11  Score=61.28  Aligned_cols=43  Identities=37%  Similarity=0.575  Sum_probs=40.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|+++++|.|.  .|++.|....+|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCN--ECGKAFRAHSNLTTHQVIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSCCCCCT--TTTCCCSSHHHHHHHHTTTCCSCCSSCC
T ss_pred             CcccccCCCCCeECC--cCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999984

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=5.5e-11  Score=61.16  Aligned_cols=43  Identities=28%  Similarity=0.500  Sum_probs=40.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|+++++|.|.  .|++.|....+|.+|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2emg_A            2 SSGSSGTGENPFICS--ECGKVFTHKTNLIIHQKIHTGERPSGPS   44 (46)
T ss_dssp             CCCCCCCSCCSCBCT--TTCCBCSSHHHHHHHHTTTSCCCCSCSC
T ss_pred             CCCCCCCCCCCEECC--ccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999984

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=4.1e-11  Score=61.66  Aligned_cols=43  Identities=30%  Similarity=0.457  Sum_probs=40.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|..|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCN--VCGKAFVLSAHLNQHLRVHTQETLSGPS   44 (46)
T ss_dssp             CSCCCCSSCCSEEET--TTTEEESSHHHHHHHHHHHSSCCSSSCC
T ss_pred             CccccCCCCCCeECc--ccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999984

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.11  E-value=5.2e-11  Score=59.97  Aligned_cols=41  Identities=27%  Similarity=0.433  Sum_probs=38.4

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      |+++|++++||.|.  .||+.|....+|..|+++|.++++|.|
T Consensus         2 H~~~H~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCG--QCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECS--SSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECC--CCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            78899999999998  999999999999999999999999887

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.6e-11  Score=61.13  Aligned_cols=43  Identities=40%  Similarity=0.648  Sum_probs=40.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2ytf_A            2 SSGSSGTGEKPFECS--ECQKAFNTKSNLIVHQRTHTGEKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSEECS--SSCCEESSHHHHHHHHHTSCSSSSSCCC
T ss_pred             CCCCCCCCCCCcCCC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            488999999999998  9999999999999999999999999985

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.9e-11  Score=61.58  Aligned_cols=46  Identities=26%  Similarity=0.361  Sum_probs=40.5

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccc
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFC  135 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C  135 (175)
                      +.+.|.+++||.|.++.|++.|...+.|..|+++|++++||+|  ++|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP--SSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSS--CCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCC--CCC
Confidence            3456888999999533799999999999999999999999999  777

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5.6e-11  Score=61.12  Aligned_cols=43  Identities=37%  Similarity=0.617  Sum_probs=40.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|+++++|.|.  .|++.|....+|..|+++|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCG--ECGKAFAQKANLTQHQRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCCCCEECS--SSCCEESSHHHHHHHHTTTSSCCSSCSC
T ss_pred             CCccCCCCCCCeECC--CCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999984

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.11  E-value=5e-11  Score=61.36  Aligned_cols=43  Identities=33%  Similarity=0.556  Sum_probs=40.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|+
T Consensus         2 ~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eon_A            2 SSGSSGTGEKPYKCQ--VCGKAFRVSSHLVQHHSVHSGERPSGPS   44 (46)
T ss_dssp             CCSSSCSSCCSCBCS--SSCCBCSSHHHHHHHTTTTTSCCSCTTS
T ss_pred             CCCCCCCCCcccCCC--CCCcccCcHHHHHHHHHhcCCCCCCCCC
Confidence            478999999999998  9999999999999999999999999985

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=4.2e-11  Score=60.36  Aligned_cols=41  Identities=32%  Similarity=0.605  Sum_probs=38.4

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      |+++|++++||.|.  .|++.|....+|..|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCE--ICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCS--SSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECC--CCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            78899999999998  999999999999999999999998876

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=4.6e-11  Score=62.09  Aligned_cols=43  Identities=30%  Similarity=0.500  Sum_probs=39.3

Q ss_pred             hccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchH
Q psy8966          91 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSK  137 (175)
Q Consensus        91 ~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~  137 (175)
                      .+.++++|.|.  .|++.|.....|..|+++|++++||.|  ++|++
T Consensus         6 ~~~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C--~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACE--ICGKIFRDVYHLNRHKLSHSGEKPYSS--GPSSG   48 (48)
T ss_dssp             CCCCCCSEEET--TTTEEESSHHHHHHHGGGSCSCCCCCS--CCCCC
T ss_pred             CCCCCcCeeCC--CCCcccCCHHHHHHHHHhcCCCCCccC--CCCCC
Confidence            35668899997  899999999999999999999999999  88985

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=3.6e-11  Score=60.61  Aligned_cols=41  Identities=32%  Similarity=0.554  Sum_probs=38.4

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      |+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCE--TCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECT--TTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCC--CcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            78999999999998  999999999999999999999999886

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.1e-11  Score=61.30  Aligned_cols=43  Identities=33%  Similarity=0.509  Sum_probs=40.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|..|+++|.++++|.|.
T Consensus         2 ~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2emz_A            2 SSGSSGSGERPFKCN--ECGKGFGRRSHLAGHLRLHSREKSSGPS   44 (46)
T ss_dssp             CCCSCSSCCCSCCCS--SSCCCCSSHHHHHHHHHHHHHTTCCCSC
T ss_pred             CCCcCCCCCCCeECC--CCCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999984

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.10  E-value=6.1e-11  Score=60.72  Aligned_cols=42  Identities=29%  Similarity=0.516  Sum_probs=39.2

Q ss_pred             hccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccch
Q psy8966          91 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCS  136 (175)
Q Consensus        91 ~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~  136 (175)
                      .|.+++||.|.  .|++.|...+.|..|+++|+++++|.|  ++||
T Consensus         4 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~~~~C--~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCP--VCGLRFKRKDRMSYHVRSHDGSVGKSG--PSSG   45 (45)
T ss_dssp             CCSSCCSSEET--TTTEECSCHHHHHHHHHHHSCCCCCCC--CCCC
T ss_pred             CcCCCCCCcCC--CCCcccCCHHHHHHHHHHccCCCCCCC--cCCC
Confidence            57789999997  899999999999999999999999999  8886

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6.1e-11  Score=60.98  Aligned_cols=43  Identities=37%  Similarity=0.586  Sum_probs=40.5

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|..|+.+|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eq3_A            2 SSGSSGTGEKPYECN--QCGKAFSVRSSLTTHQAIHTGKKPSGPS   44 (46)
T ss_dssp             CCCCSSCCCCSSEET--TTTEECSSHHHHHHHHTTSCCCCCCCSC
T ss_pred             CcccCCCCCCCeECC--CCChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            489999999999998  9999999999999999999999999985

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.10  E-value=5.2e-11  Score=60.65  Aligned_cols=42  Identities=17%  Similarity=0.283  Sum_probs=39.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      .|+++|++++||.|.  .|++.|....+|..|+.+|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2emb_A            2 SSGSSGHTRKRYECS--KCQATFNLRKHLIQHQKTHAAKSGPSS   43 (44)
T ss_dssp             CCCSCCCCCSSEECT--TTCCEESCHHHHHHHGGGGCCCCCTTC
T ss_pred             CcccccCCCCCeECC--CCCCccCCHHHHHHHHHHcCCCCCcCC
Confidence            488999999999998  999999999999999999999999988

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=9.3e-11  Score=59.73  Aligned_cols=42  Identities=33%  Similarity=0.419  Sum_probs=39.1

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      .|+++|++++||.|.  .|++.|.....|..|+.+|.++++|.|
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~~   43 (44)
T 2epv_A            2 SSGSSGSGEKPYECN--ECGKAFIWKSLLIVHERTHAGVSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCSEECS--SSCCEESSHHHHHHHHGGGSSCSCCCC
T ss_pred             CCCcccCCCcCeECC--CCCcccCchHHHHHHHhHhcCCCCCCC
Confidence            488999999999998  999999999999999999999998876

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.6e-11  Score=61.47  Aligned_cols=43  Identities=26%  Similarity=0.429  Sum_probs=40.1

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCK--ECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECS--SSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCc--ccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            488999999999998  9999999999999999999999999985

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.08  E-value=6.4e-11  Score=60.93  Aligned_cols=41  Identities=29%  Similarity=0.311  Sum_probs=38.6

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcC-CCcccC
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG-EKPYRC  130 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~-~~~~~C  130 (175)
                      |++.|.+++||.|+  .|++.|...+.|..|+++|++ ++||.|
T Consensus         3 H~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~~~~~~C   44 (46)
T 2eoy_A            3 SGSSGQKEKCFKCN--KCEKTFSCSKYLTQHERIHTRGVKSGPS   44 (46)
T ss_dssp             CCCCCCCSCCEECS--SSCCEESSSHHHHHHHTTCCSCCTTSSS
T ss_pred             CccccCCCCCEECc--CCCCcCCCHHHHHHHHHHcCCCCCCCCC
Confidence            66788899999997  899999999999999999999 999999

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.6e-11  Score=60.44  Aligned_cols=43  Identities=40%  Similarity=0.644  Sum_probs=40.2

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+++|.++++|.|.
T Consensus         2 ~h~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            2 SSGSSGTGEKPYECD--VCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSSCBCT--TTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCCcCCCCCcCCC--CcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            378999999999998  9999999999999999999999999984

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=4.6e-11  Score=60.87  Aligned_cols=42  Identities=21%  Similarity=0.362  Sum_probs=39.4

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      .|+++|++++||.|.  .|++.|....+|.+|+.+|.++++|.|
T Consensus         2 ~H~~~H~~~~~~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~C   43 (44)
T 2eox_A            2 SSGSSGTDSKSYNCN--ECGKAFTRIFHLTRHQKIHTRKSGPSS   43 (44)
T ss_dssp             CCCCCCCCCCCEEET--TTTEEESSSHHHHTTHHHHCCCCCCSC
T ss_pred             CCCcCCCCCCCeECc--ccCcccCCHHHHHHHHHHhCCCCCCCC
Confidence            488999999999998  999999999999999999999999987

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=8.8e-11  Score=60.40  Aligned_cols=43  Identities=37%  Similarity=0.579  Sum_probs=40.0

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccc
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAH   46 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~   46 (175)
                      .+++|+++++|.|.  .|++.|....+|.+|+++|.++++|.|..
T Consensus         3 ~~~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytt_A            3 SGSSGEGEKPYQCS--ECGKSFSGSYRLTQHWITHTREKPSGPSS   45 (46)
T ss_dssp             CSSSCSCCCTTCCS--SSCCCCSSHHHHHHHHTHHHHCCCCSCCC
T ss_pred             CCCCCCCCCCeeCC--CCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            57899999999998  99999999999999999999999999954

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.06  E-value=1.3e-10  Score=59.10  Aligned_cols=41  Identities=20%  Similarity=0.206  Sum_probs=38.9

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeec
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC   44 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C   44 (175)
                      |+++|+++++|.|.  .|++.|....+|..|+++|.++++|.|
T Consensus         3 h~~~h~~~~~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   43 (44)
T 2eou_A            3 SGSSGAAKTTSECQ--ECGKIFRHSSLLIEHQALHAGESGPSS   43 (44)
T ss_dssp             CSCSCSSSCCCCCT--TTCCCCSSHHHHHHHHHHHTTSCCCCC
T ss_pred             CCCCCCCCcCeECC--CCCcccCCHHHHHHHHHHHCCCCCCCC
Confidence            78899999999998  999999999999999999999999988

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.05  E-value=1.6e-11  Score=67.51  Aligned_cols=50  Identities=16%  Similarity=0.176  Sum_probs=44.8

Q ss_pred             HHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchhhhccc
Q psy8966         116 KAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCLSG  170 (175)
Q Consensus       116 ~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~~~~~~  170 (175)
                      ..|+++|++++||.|  ++|++.|.....|.   ++|+++.||.|+.||+.|...
T Consensus         3 ~~h~~~H~~~k~~~C--~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~   52 (62)
T 1vd4_A            3 ETDERDSTNRASFKC--PVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEED   52 (62)
T ss_dssp             CCCSSSCCSSSEEEC--SSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEEC
T ss_pred             hhHHHHcCCCCCccC--CCCCchhccHHHhH---hhcCCCCCEECCCCCCccccC
Confidence            457888999999999  88999999988886   889999999999999988754

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=99.04  E-value=6.5e-11  Score=58.66  Aligned_cols=37  Identities=22%  Similarity=0.514  Sum_probs=26.4

Q ss_pred             hcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccC
Q psy8966         122 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEV  160 (175)
Q Consensus       122 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  160 (175)
                      |++++||.|  ++|++.|...+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C--~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTC--SFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEEC--TTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceEC--CCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            356677777  6677777777777777777777777765

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.03  E-value=2.7e-10  Score=57.66  Aligned_cols=39  Identities=26%  Similarity=0.314  Sum_probs=36.2

Q ss_pred             hhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          90 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        90 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                      +.|.+++||.|.  .|++.|...+.|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (43)
T 2yrm_A            3 SGSSGNGAFFCN--ECDCRFSEEASLKRHTLQTHSDKSGPS   41 (43)
T ss_dssp             SCCSSSCCBCCS--SSCCCBSSHHHHHHHHHHHTCTTCSSS
T ss_pred             cCcCCCCCEECC--CCCCeeCChHHHHHHHHhhCCCCCccC
Confidence            357789999997  899999999999999999999999999

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.01  E-value=1.1e-10  Score=64.32  Aligned_cols=39  Identities=31%  Similarity=0.461  Sum_probs=24.6

Q ss_pred             ccCCcceeccCCCcccccCCHHHHHHHH-hhhcCCCcccC
Q psy8966          92 HSGIRPYKCPVEYCEKAFSTQYSRKAHI-RTHTGEKPYRC  130 (175)
Q Consensus        92 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C  130 (175)
                      .++++||.|+++.|++.|...++|..|+ ++|++++||.|
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~   61 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFS   61 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCC
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccc
Confidence            4556666665334666666666666665 46666666666

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=2.4e-10  Score=58.40  Aligned_cols=42  Identities=31%  Similarity=0.544  Sum_probs=39.1

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      +.++|+++++|.|.  .|++.|....+|.+|+++|.++++|.|+
T Consensus         3 ~~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            3 SGSSGTGQKPFECT--HCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCCSCCSEEET--TTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCCcCccCC--CCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            57889999999998  9999999999999999999999999984

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.00  E-value=3.7e-10  Score=57.99  Aligned_cols=42  Identities=33%  Similarity=0.402  Sum_probs=39.2

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeecc
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCA   45 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~   45 (175)
                      .+++|+++++|.|.  .|++.|....+|..|+++|.++++|.|.
T Consensus         3 ~~~~h~~~k~~~C~--~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eom_A            3 SGSSGHGERGHRCS--DCGKFFLQASNFIQHRRIHTGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCCSSCCCS--SSCCCCSSHHHHHHHHHHHSSCCCSSCC
T ss_pred             CCCCCCCCCCcCCC--CCCCeeCChHHHHHHHHHhCCCCCCCCC
Confidence            57899999999998  9999999999999999999999999984

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.99  E-value=3.8e-10  Score=56.42  Aligned_cols=39  Identities=38%  Similarity=0.563  Sum_probs=36.0

Q ss_pred             hhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          90 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        90 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                      ..|.+++||.|+  .|++.|...+.|..|+++|++++||.|
T Consensus         3 ~~h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQ--ECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECS--SSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECC--CCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            357789999997  899999999999999999999999987

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.98  E-value=5e-10  Score=61.69  Aligned_cols=41  Identities=27%  Similarity=0.469  Sum_probs=35.4

Q ss_pred             hcCCCcccCCcccchHHHhchhhHHHHH-HHhcCCccccCCc
Q psy8966         122 HTGEKPYRCAHEFCSKSFKTSGDLQKHV-RTHTGKYTAEVPG  162 (175)
Q Consensus       122 h~~~~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  162 (175)
                      .+++|||+|+.+.|+++|..+++|.+|+ ++|++++||.|-.
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            3689999993334999999999999998 6899999999865

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.96  E-value=1.1e-10  Score=57.07  Aligned_cols=36  Identities=36%  Similarity=0.620  Sum_probs=27.2

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      |+++|++++||.|  ++|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCC--TTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccC--CCCCcccCcHHHHHHHHHHhccC
Confidence            5566777778888  77888888888888888777764

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.95  E-value=1.3e-10  Score=56.81  Aligned_cols=36  Identities=22%  Similarity=0.575  Sum_probs=26.3

Q ss_pred             hhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCcc
Q psy8966         120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT  157 (175)
Q Consensus       120 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  157 (175)
                      ++|++++||.|  ++|++.|..+..|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSC--PVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEE--TTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCC--CCCCCccCCHHHHHHHHHHHcCCCC
Confidence            35667777777  7777777777777777777777654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.94  E-value=2.6e-11  Score=71.36  Aligned_cols=60  Identities=15%  Similarity=0.222  Sum_probs=49.5

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +...|.+++||.|+  .|++.|...+.|..|+++|++++||.|  ..|.    ....|..|.++|++.
T Consensus        16 ~~~~H~~~kpy~C~--~C~k~F~~~~~L~~H~~~Ht~ekp~~C--~~~~----~~~~~~~~~~~~~~~   75 (88)
T 1x6f_A           16 GNGPRLQNSTYQCK--HCDSKLQSTAELTSHLNIHNEEFQKRA--KRQE----RRKQLLSKQKYADGA   75 (88)
T ss_dssp             CCCSCCCCSCEECS--SSCCEESSHHHHHHHHHHHHHHHHHHC--CCCS----CCCCCCCCCCCCCCS
T ss_pred             cccccCCCCCCcCC--CCCCEeCCHHHHHHHHHHhCCCCCccc--chhh----hHHHHHhhhcccccc
Confidence            45568889999996  899999999999999999999999999  6655    466677888888773

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=1.7e-10  Score=65.80  Aligned_cols=64  Identities=20%  Similarity=0.285  Sum_probs=56.7

Q ss_pred             chhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCc
Q psy8966          86 FVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY  156 (175)
Q Consensus        86 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  156 (175)
                      ..|+..+.+.+|+.|+  .|++.|. .++|..|. .+.+++|+.|  +.|++.|. ...|..|+++|+++.
T Consensus         6 ~~H~~~~c~~r~~~C~--~C~~~~~-~~~L~~H~-~~c~~~~~~C--~~C~~~~~-~~~l~~H~~~c~~~~   69 (75)
T 2d9k_A            6 SGHEETECPLRLAVCQ--HCDLELS-ILKLKEHE-DYCGARTELC--GNCGRNVL-VKDLKTHPEVCGREG   69 (75)
T ss_dssp             SCCCCCCCCCCCEECS--SSCCEEC-HHHHHHHH-HHHHHCEEEC--SSSCCEEE-TTGGGTHHHHBTTBS
T ss_pred             HhhCcccCCCcccCCc--ccChHhh-HHHHHHHH-hHcCCCceEc--ccCCCcCc-HHHHHHHHHHccCCc
Confidence            4577778889999997  8999995 88999999 8999999999  88999877 589999999998874

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=98.92  E-value=3.3e-10  Score=60.33  Aligned_cols=42  Identities=17%  Similarity=0.223  Sum_probs=37.3

Q ss_pred             chhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCccc
Q psy8966          86 FVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYR  129 (175)
Q Consensus        86 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  129 (175)
                      ..|++.|.+++||.|.  .|++.|...+.|..|+++|++++||.
T Consensus        13 ~~h~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~~   54 (54)
T 1yui_A           13 EKPRSRSQSEQPATCP--ICYAVIRQSRNLRRHLELRHFAKPGV   54 (54)
T ss_dssp             CCCHHHHTSSCCEECT--TTCCEESSHHHHHHHHHHHTTTSCCC
T ss_pred             hhHHHhcCCCCCccCC--CCCcccCCHHHHHHHHHHhccCCCCC
Confidence            4466777789999997  89999999999999999999999874

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.92  E-value=2.8e-10  Score=55.90  Aligned_cols=32  Identities=25%  Similarity=0.380  Sum_probs=22.0

Q ss_pred             hcCCCcccCCccc--chHHHhchhhHHHHHHHhcCC
Q psy8966         122 HTGEKPYRCAHEF--CSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       122 h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +++++||+|  ++  |+++|..++.|.+|+++|+++
T Consensus         4 ~~gekp~~C--~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKC--PTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEEC--SSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCC--CCCCCCCccCCHHHHHHHHHhcCCC
Confidence            456677777  54  777777777777777777664

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.91  E-value=3.1e-10  Score=54.57  Aligned_cols=34  Identities=32%  Similarity=0.626  Sum_probs=24.1

Q ss_pred             hcCCCcccCCcccchHHHhchhhHHHHHHHhcCCcc
Q psy8966         122 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT  157 (175)
Q Consensus       122 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  157 (175)
                      |++++||.|  ++|++.|..++.|..|+++|++++|
T Consensus         2 h~~~k~~~C--~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVC--ALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEEC--SSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeEC--CCCcchhCCHHHHHHHHHHHcCCCC
Confidence            556677777  6677777777777777777776643

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.90  E-value=3.3e-10  Score=54.53  Aligned_cols=34  Identities=26%  Similarity=0.785  Sum_probs=23.7

Q ss_pred             hcCCCcccCCcccchHHHhchhhHHHHHHHhcCCcc
Q psy8966         122 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT  157 (175)
Q Consensus       122 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  157 (175)
                      |.+++||.|  ++|++.|.....|.+|+++|+++.|
T Consensus         2 H~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVC--RICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEEC--SSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeC--CCCCcccCCHHHHHHHHHHcCCCCC
Confidence            556677777  6677777777777777777776653

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.87  E-value=5.1e-10  Score=54.93  Aligned_cols=35  Identities=23%  Similarity=0.494  Sum_probs=22.7

Q ss_pred             hcCCCcccCCcc--cchHHHhchhhHHHHHHHhcCCccc
Q psy8966         122 HTGEKPYRCAHE--FCSKSFKTSGDLQKHVRTHTGKYTA  158 (175)
Q Consensus       122 h~~~~~~~C~~~--~C~~~f~~~~~l~~H~~~h~~~~~~  158 (175)
                      |++++||.|  .  .|++.|...+.|.+|+++|++++||
T Consensus         1 H~~~k~~~C--~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            1 MSDDKPFLC--TAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             CTTCCCEEC--CCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCCcceEC--CCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            345666666  5  4666666666666666666666655

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.85  E-value=9.6e-10  Score=52.24  Aligned_cols=32  Identities=28%  Similarity=0.445  Sum_probs=21.8

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCCcccc
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAE  159 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  159 (175)
                      +||.|  ++|++.|.....|..|+++|+++.||.
T Consensus         1 kp~~C--~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFAC--PECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCC--SSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccC--CCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            45667  667777777777777777777766654

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.83  E-value=1.5e-10  Score=68.16  Aligned_cols=45  Identities=13%  Similarity=0.423  Sum_probs=41.5

Q ss_pred             HhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchh
Q psy8966         119 IRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSIL  165 (175)
Q Consensus       119 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~  165 (175)
                      ..+|++++||.|  ++|++.|.....|..|+++|++++||.|..|..
T Consensus        17 ~~~H~~~kpy~C--~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~   61 (88)
T 1x6f_A           17 NGPRLQNSTYQC--KHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER   61 (88)
T ss_dssp             CCSCCCCSCEEC--SSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC
T ss_pred             ccccCCCCCCcC--CCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh
Confidence            456889999999  889999999999999999999999999998863

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.80  E-value=5.1e-09  Score=51.57  Aligned_cols=37  Identities=19%  Similarity=0.495  Sum_probs=33.4

Q ss_pred             ccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          92 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        92 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                      |.+++||.|.  .|++.|...+.|..|+++|++++||.+
T Consensus         1 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCS--FCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECT--TTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECC--CCCcccCCHHHHHHHHHHcCCCcccee
Confidence            3568899997  899999999999999999999999976

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.80  E-value=5.3e-09  Score=50.79  Aligned_cols=36  Identities=31%  Similarity=0.630  Sum_probs=30.2

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcC
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG   38 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~   38 (175)
                      .|+++|++++||.|.  .|++.|.....|..|+++|.+
T Consensus         1 ~H~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            1 GSTRGSTGIKPFQCP--DCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CCSSTTCCSSSBCCT--TTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCCcCCCCCCccCC--CCCcccCcHHHHHHHHHHhcc
Confidence            377888888888887  888888888888888888765

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2.4e-09  Score=61.00  Aligned_cols=62  Identities=21%  Similarity=0.366  Sum_probs=55.0

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHhcCC
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK   69 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   69 (175)
                      .|++++.+++|+.|.  .|+..|. ..+|..|+ .+.+.+++.|+.  |++.|.. ..|..|+.++.+.
T Consensus         7 ~H~~~~c~~r~~~C~--~C~~~~~-~~~L~~H~-~~c~~~~~~C~~--C~~~~~~-~~l~~H~~~c~~~   68 (75)
T 2d9k_A            7 GHEETECPLRLAVCQ--HCDLELS-ILKLKEHE-DYCGARTELCGN--CGRNVLV-KDLKTHPEVCGRE   68 (75)
T ss_dssp             CCCCCCCCCCCEECS--SSCCEEC-HHHHHHHH-HHHHHCEEECSS--SCCEEET-TGGGTHHHHBTTB
T ss_pred             hhCcccCCCcccCCc--ccChHhh-HHHHHHHH-hHcCCCceEccc--CCCcCcH-HHHHHHHHHccCC
Confidence            378889999999998  9999995 89999999 899999999966  9999875 8899999998875

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=5.1e-09  Score=50.87  Aligned_cols=36  Identities=42%  Similarity=0.603  Sum_probs=27.5

Q ss_pred             ccccCCCCCccCCCccchhhccChHHHHHHHhhhcCCC
Q psy8966           3 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK   40 (175)
Q Consensus         3 ~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~   40 (175)
                      +++|++++||.|.  .|++.|....+|..|+.+|.+++
T Consensus         1 ~~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~h~~~k   36 (37)
T 2elo_A            1 GSSGSSGRSYSCP--VCEKSFSEDRLIKSHIKTNHPEV   36 (37)
T ss_dssp             CCCCCCCCCCEET--TTTEECSSHHHHHHHHHHHCSSC
T ss_pred             CCCCCCCCCcCCC--CCCCccCCHHHHHHHHHHHcCCC
Confidence            4577788888886  78888888888888887777654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.5e-09  Score=51.63  Aligned_cols=33  Identities=36%  Similarity=0.753  Sum_probs=23.5

Q ss_pred             hhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +|.+++||.|  ++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKC--PQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEEC--SSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCC--CCCCcccCCHHHHHHHHHHccCC
Confidence            3566777777  66777777777777777777665

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=1e-08  Score=50.08  Aligned_cols=38  Identities=18%  Similarity=0.377  Sum_probs=32.8

Q ss_pred             ccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCccc
Q psy8966          92 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYR  129 (175)
Q Consensus        92 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  129 (175)
                      |.+++||.|.++.|++.|...+.|..|+++|++++||.
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~   38 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKFG   38 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTTC
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCCC
Confidence            45688999963359999999999999999999999873

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=1.7e-09  Score=52.67  Aligned_cols=33  Identities=27%  Similarity=0.703  Sum_probs=24.3

Q ss_pred             hhcCCCcccCCcccchHHHhch-hhHHHHHHHhcCC
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTS-GDLQKHVRTHTGK  155 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~-~~l~~H~~~h~~~  155 (175)
                      +|.+++||.|  ++|++.|... +.|..|+++|+++
T Consensus         3 ~h~~~k~~~C--~~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            3 SGSSGRAMKC--PYCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             SCCCCCCEEC--SSSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCeEC--CCCChhhccCHHHHHHHHHhcCCC
Confidence            4666777777  6777777777 7777777777665

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=1.4e-09  Score=52.99  Aligned_cols=33  Identities=24%  Similarity=0.462  Sum_probs=22.9

Q ss_pred             hhcCCCcccCCcccchHHHhchhhHHHH-HHHhcCC
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTSGDLQKH-VRTHTGK  155 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~  155 (175)
                      +|++++||+|  ++|++.|..+..|..| +++|+++
T Consensus         3 ~H~~~k~~~C--~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            3 SGSSGHLYYC--SQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             SSSSSCEEEC--SSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             ccCCCcCeEC--CCCCcccCCHHHHHHHHHHHccCc
Confidence            4666777777  6677777777777777 6666653

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=2e-09  Score=52.07  Aligned_cols=33  Identities=27%  Similarity=0.585  Sum_probs=22.7

Q ss_pred             hhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      .|.+++||.|  ++|++.|...+.|..|+++|+++
T Consensus         3 ~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            3 SGSSGLLYDC--HICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CSCCCCCEEC--SSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCeEC--CCCCCccCCHHHHHHHHHHhcCC
Confidence            3556677777  66777777777777777777664

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=2.7e-09  Score=51.55  Aligned_cols=33  Identities=21%  Similarity=0.700  Sum_probs=23.1

Q ss_pred             hhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +|.+++||.|  ++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKC--SLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEEC--SSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccC--CCCCchhCCHHHHHHHHHHhccC
Confidence            3566677777  66777777777777777777664

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.72  E-value=4.2e-09  Score=50.82  Aligned_cols=33  Identities=33%  Similarity=0.661  Sum_probs=24.4

Q ss_pred             hhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +|.++++|.|  ++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~~~~~C--~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLC--DMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBC--TTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeec--CcCCCCcCchHHHHHHHHHhcCC
Confidence            3566777777  77777777777777777777765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.71  E-value=2.7e-09  Score=55.26  Aligned_cols=35  Identities=29%  Similarity=0.645  Sum_probs=24.6

Q ss_pred             hhcCCCcccCCcccchHHHhchhhHHHHHH-HhcCCcc
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTGKYT  157 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~  157 (175)
                      +|++++||.|  .+|++.|.....|..|++ +|+++.+
T Consensus         1 ~Ht~~kp~~C--~~C~k~F~~~~~L~~H~~~~H~~e~~   36 (48)
T 3iuf_A            1 GEDRDKPYAC--DICGKRYKNRPGLSYHYAHSHLAEEE   36 (48)
T ss_dssp             -CTTTSCEEC--TTTCCEESSHHHHHHHHHHSSCC---
T ss_pred             CCCCCcCEEC--CCcCcccCCHHHHHHHhhhhcCCCCC
Confidence            3667788888  778888888888888887 7777643

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.70  E-value=2.7e-09  Score=51.59  Aligned_cols=25  Identities=20%  Similarity=0.457  Sum_probs=17.2

Q ss_pred             cCCCcccCCcccchHHHhchhhHHHHH
Q psy8966         123 TGEKPYRCAHEFCSKSFKTSGDLQKHV  149 (175)
Q Consensus       123 ~~~~~~~C~~~~C~~~f~~~~~l~~H~  149 (175)
                      .+++||+|  ++|+++|.++++|.+|+
T Consensus         4 ~gekp~~C--~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            4 LKPARFMC--LPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SSCCCCEE--TTTTEECSCHHHHHHHH
T ss_pred             CCccCeEC--CCCCCccCCHhHccCcC
Confidence            45667777  66777777777777776

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.70  E-value=2.1e-08  Score=49.09  Aligned_cols=34  Identities=29%  Similarity=0.522  Sum_probs=29.7

Q ss_pred             ccCCcceeccCCCcccccCCHHHHHHHHhhhcCC
Q psy8966          92 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE  125 (175)
Q Consensus        92 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  125 (175)
                      +.+++||.|+++.|++.|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            4678999997335999999999999999999875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.68  E-value=6.4e-09  Score=50.19  Aligned_cols=32  Identities=41%  Similarity=0.786  Sum_probs=23.3

Q ss_pred             hcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         122 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       122 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      |.+++||.|  ++|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTC--EYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEEC--TTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEEC--CCCCceeCCHHHHHHHHHHhCCC
Confidence            456677777  66777777777777777777765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.68  E-value=9.3e-10  Score=56.78  Aligned_cols=35  Identities=26%  Similarity=0.555  Sum_probs=20.4

Q ss_pred             HhhhcCCCcccCCcc--cchHHHhchhhHHHHHHHhcCC
Q psy8966         119 IRTHTGEKPYRCAHE--FCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       119 ~~~h~~~~~~~C~~~--~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      ...|.+++||.|  +  +|++.|..++.|.+|+++|+++
T Consensus        10 ~~~H~~~k~~~C--~~~~C~k~F~~~~~L~~H~~~H~~e   46 (47)
T 1ncs_A           10 YVKEMPDKTFEC--LFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             SCEEETTTEEEC--CCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             HhccCCCCCeEC--CCCCCCCccCCHHHHHHHHHHccCC
Confidence            344556666666  4  3666666666666666666554

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.66  E-value=8.4e-10  Score=52.04  Aligned_cols=31  Identities=29%  Similarity=0.479  Sum_probs=26.6

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCCccc
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTA  158 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~  158 (175)
                      +||.|  ++|++.|..++.|..|+++|++++||
T Consensus         1 kp~~C--~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFAC--PACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSS--SSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCC--CCCCcccCCHHHHHHHHHHHccCCCC
Confidence            47888  78999999999999999889888876

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.65  E-value=6.2e-09  Score=50.66  Aligned_cols=32  Identities=31%  Similarity=0.562  Sum_probs=19.2

Q ss_pred             hcCCCcccCCcc--cchHHHhchhhHHHHHHHhcCC
Q psy8966         122 HTGEKPYRCAHE--FCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       122 h~~~~~~~C~~~--~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      |++++||.|  .  .|++.|..++.|.+|+++|+++
T Consensus         3 ~~~~k~~~C--~~~~C~k~f~~~~~L~~H~~~H~~e   36 (37)
T 1va1_A            3 PGKKKQHIC--HIQGCGKVYGKTSHLRAHLRWHTGE   36 (37)
T ss_dssp             SSSCCCEEC--CSTTCCCEESCHHHHHHHHHHHHTT
T ss_pred             CCCCCCCCC--CCCCCCCccCCHHHHHHHHHhcCCC
Confidence            445566666  5  3666666666666666666554

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.65  E-value=3.1e-08  Score=47.25  Aligned_cols=34  Identities=32%  Similarity=0.599  Sum_probs=31.0

Q ss_pred             ccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCc
Q psy8966          92 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP  127 (175)
Q Consensus        92 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  127 (175)
                      |.+++||.|.  .|++.|...+.|..|+++|++++|
T Consensus         2 h~~~k~~~C~--~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCA--LCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECS--SSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECC--CCcchhCCHHHHHHHHHHHcCCCC
Confidence            5678999997  899999999999999999998875

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.63  E-value=2.9e-08  Score=47.40  Aligned_cols=34  Identities=35%  Similarity=0.635  Sum_probs=22.7

Q ss_pred             ccCCCCCccCCCccchhhccChHHHHHHHhhhcCCC
Q psy8966           5 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK   40 (175)
Q Consensus         5 ~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~   40 (175)
                      +|++++||.|.  .|++.|....+|.+|++.|.+++
T Consensus         1 ~H~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~~   34 (35)
T 1srk_A            1 GSSGKRPFVCR--ICLSAFTTKANCARHLKVHTDTL   34 (35)
T ss_dssp             CCSCCSCEECS--SSCCEESSHHHHHHHHGGGTSCC
T ss_pred             CCCCCcCeeCC--CCCcccCCHHHHHHHHHHcCCCC
Confidence            35666677775  67777777777777776666554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.62  E-value=3.5e-08  Score=46.60  Aligned_cols=32  Identities=28%  Similarity=0.418  Sum_probs=29.5

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCCccc
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYR  129 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  129 (175)
                      +||.|+  .|++.|...+.|..|+.+|++++||.
T Consensus         1 kp~~C~--~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACP--ECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCS--SSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCC--CCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            478996  89999999999999999999999985

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.60  E-value=2e-08  Score=51.61  Aligned_cols=41  Identities=22%  Similarity=0.481  Sum_probs=34.7

Q ss_pred             chhhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          86 FVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        86 ~~~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      ..+...|.+++||.|.++.|++.|...+.|..|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            34556688999999964479999999999999999998864

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.60  E-value=2.4e-08  Score=48.47  Aligned_cols=35  Identities=26%  Similarity=0.294  Sum_probs=26.8

Q ss_pred             ccccCCCCCccCCCccchhhccChHHHHHH-HhhhcCC
Q psy8966           3 LRIHSGIRPYKCPVEYCEKAFSTQYSRKAH-IRTHTGE   39 (175)
Q Consensus         3 ~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h-~~~~~~~   39 (175)
                      +++|++++||.|.  .|++.|....+|..| +..|.+.
T Consensus         1 ~~~H~~~k~~~C~--~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            1 GSSGSSGHLYYCS--QCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CCSSSSSCEEECS--SSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CCccCCCcCeECC--CCCcccCCHHHHHHHHHHHccCc
Confidence            4677888888886  788888888888888 7777653

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.58  E-value=1.6e-07  Score=51.54  Aligned_cols=55  Identities=20%  Similarity=0.466  Sum_probs=48.2

Q ss_pred             ccCCCccchhhccChHHHHHHHh-hhcCCC------CeeccccccCcccCChHHHHHHHHHh
Q psy8966          12 YKCPVEYCEKAFSTQYSRKAHIR-THTGEK------PYRCAHEFCSKSFKTSGDLQKHVRTH   66 (175)
Q Consensus        12 ~~C~~~~C~~~f~~~~~L~~h~~-~~~~~~------~~~C~~~~C~~~f~~~~~l~~H~~~h   66 (175)
                      +.|.|..|++.|.+...|..|+. .|.+..      +|.|.++.|++.+.....|..|+++.
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            56888899999999999999985 787665      79999888999999999999998874

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.55  E-value=2.3e-08  Score=46.72  Aligned_cols=29  Identities=38%  Similarity=0.883  Sum_probs=21.1

Q ss_pred             CCcccCCcc--cchHHHhchhhHHHHHHHhcCC
Q psy8966         125 EKPYRCAHE--FCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       125 ~~~~~C~~~--~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      ++||.|  +  .|++.|.....|..|+++|+++
T Consensus         1 ek~~~C--~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            1 DRPYSC--DHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCC--CCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCCcC--cCCCCCCccCCHHHHHHHHHHccCC
Confidence            357777  6  6777777777777777777765

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.51  E-value=6.8e-08  Score=46.72  Aligned_cols=34  Identities=35%  Similarity=0.604  Sum_probs=23.6

Q ss_pred             cccCCCCCccCCCccchhhccCh-HHHHHHHhhhcCC
Q psy8966           4 RIHSGIRPYKCPVEYCEKAFSTQ-YSRKAHIRTHTGE   39 (175)
Q Consensus         4 ~~~~~~~~~~C~~~~C~~~f~~~-~~L~~h~~~~~~~   39 (175)
                      ++|++++||.|.  .|++.|... .+|.+|+.+|.++
T Consensus         2 ~~h~~~k~~~C~--~C~k~f~~~~~~L~~H~~~H~~~   36 (37)
T 2elp_A            2 SSGSSGRAMKCP--YCDFYFMKNGSDLQRHIWAHEGV   36 (37)
T ss_dssp             CSCCCCCCEECS--SSSCEECSSCHHHHHHHHHHHTC
T ss_pred             CCCCCCCCeECC--CCChhhccCHHHHHHHHHhcCCC
Confidence            456777777776  777777776 7777777766554

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=9.3e-08  Score=45.92  Aligned_cols=34  Identities=35%  Similarity=0.610  Sum_probs=23.0

Q ss_pred             cccCCCCCccCCCccchhhccChHHHHHHHhhhcCC
Q psy8966           4 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE   39 (175)
Q Consensus         4 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~   39 (175)
                      ++|++++||.|.  .|++.|....+|..|+++|.++
T Consensus         2 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            2 SSGSSGKPFKCS--LCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             CSSCCCCSEECS--SSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCCccCC--CCCchhCCHHHHHHHHHHhccC
Confidence            356667777776  6777777777777777666553

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.50  E-value=1.2e-07  Score=45.93  Aligned_cols=35  Identities=29%  Similarity=0.546  Sum_probs=30.2

Q ss_pred             ccCCcceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          92 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        92 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      +.+++||.|..+.|++.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            56789999963359999999999999999998864

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=9e-08  Score=45.97  Aligned_cols=34  Identities=26%  Similarity=0.515  Sum_probs=24.1

Q ss_pred             cccCCCCCccCCCccchhhccChHHHHHHHhhhcCC
Q psy8966           4 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE   39 (175)
Q Consensus         4 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~   39 (175)
                      +.|++++||.|.  .|++.|.....|.+|+++|.++
T Consensus         2 ~~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            2 SSGSSGLLYDCH--ICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             CCSCCCCCEECS--SSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCCCeECC--CCCCccCCHHHHHHHHHHhcCC
Confidence            356677777776  7777777777777777776654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.49  E-value=3e-08  Score=46.01  Aligned_cols=27  Identities=52%  Similarity=1.128  Sum_probs=15.4

Q ss_pred             cccCCcc--cchHHHhchhhHHHHHHHhcCC
Q psy8966         127 PYRCAHE--FCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       127 ~~~C~~~--~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      ||.|  +  +|++.|...+.|..|+++|+++
T Consensus         2 p~~C--~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            2 PFMC--TWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCBC--CSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CcCC--cCCCCCcccCCHhHHHHHHHHhcCC
Confidence            4555  4  5566665555565665555554

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.48  E-value=4.3e-08  Score=54.11  Aligned_cols=32  Identities=22%  Similarity=0.416  Sum_probs=19.8

Q ss_pred             hcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         122 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       122 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +.+++||.|  .+|++.|..+..|.+|+++|+++
T Consensus         8 ~~~ekpy~C--~~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            8 LREAGILPC--GLCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             CCCCCCCCC--TTTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCccCcCC--CCCCCccCCHHHHHhhhhhhCCC
Confidence            345566666  55666666666666666666654

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.47  E-value=4e-08  Score=44.96  Aligned_cols=28  Identities=36%  Similarity=0.937  Sum_probs=17.8

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +||.|  ++|++.|.....|..|+++|+++
T Consensus         2 k~~~C--~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQC--DYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEEC--TTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccC--CCCCcccCCHHHHHHHHHHhccC
Confidence            56666  56666666666666666666554

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.47  E-value=1.3e-07  Score=45.28  Aligned_cols=33  Identities=42%  Similarity=0.752  Sum_probs=21.7

Q ss_pred             ccCCCCCccCCCccchhhccChHHHHHHHhhhcCC
Q psy8966           5 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE   39 (175)
Q Consensus         5 ~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~   39 (175)
                      +|++++||.|.  .|++.|.....|..|+++|.++
T Consensus         3 ~h~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCP--QCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECS--SSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCC--CCCcccCCHHHHHHHHHHccCC
Confidence            56666667775  6777777767777776666543

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.47  E-value=5.2e-08  Score=44.22  Aligned_cols=28  Identities=32%  Similarity=0.878  Sum_probs=19.0

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +||.|  ++|++.|.....|..|+++|+++
T Consensus         1 k~~~C--~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVC--EVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBC--TTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeEC--CCCCcccCCHHHHHHHHHHhcCC
Confidence            35667  66777777777777777776654

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.46  E-value=1.5e-07  Score=43.48  Aligned_cols=31  Identities=48%  Similarity=0.902  Sum_probs=27.0

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      +||.|+++.|++.|...+.|..|+++|++++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~k   31 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCCC
Confidence            4788965589999999999999999998864

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.45  E-value=6.2e-08  Score=44.28  Aligned_cols=29  Identities=31%  Similarity=0.710  Sum_probs=20.1

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCCc
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY  156 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  156 (175)
                      +||.|  ++|++.|...+.|..|+++|+++.
T Consensus         1 k~~~C--~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQC--QYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCC--SSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccC--CCCCCccCCHHHHHHHHHHHccCC
Confidence            35677  667777777777777777776654

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.45  E-value=4.1e-08  Score=44.63  Aligned_cols=28  Identities=32%  Similarity=0.583  Sum_probs=17.7

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +||.|  ++|++.|.....|..|+++|+++
T Consensus         1 k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFAC--PECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEEC--SSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccC--CCCCchhCCHHHHHHHHHHhcCC
Confidence            35666  56666666666666666666654

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.82  E-value=2.4e-08  Score=45.50  Aligned_cols=28  Identities=46%  Similarity=0.956  Sum_probs=23.0

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +||.|  ++|++.|.....|..|+++|+++
T Consensus         1 k~~~C--~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQC--VMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            47888  77888888888888888888775

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.43  E-value=4.1e-08  Score=44.32  Aligned_cols=27  Identities=41%  Similarity=0.978  Sum_probs=17.2

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      +||.|  ++|++.|.....|..|+++|++
T Consensus         2 k~~~C--~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            2 RPYSC--SVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CSEEC--SSSCCEESCHHHHHHHHTTSCC
T ss_pred             cCccC--CCCCcccCCHHHHHHHHHhcCC
Confidence            56666  6666666666666666666643

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.80  E-value=2.7e-08  Score=45.63  Aligned_cols=29  Identities=52%  Similarity=1.038  Sum_probs=23.8

Q ss_pred             CCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       125 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      ++||.|  +.|++.|.....|..|+++|+++
T Consensus         1 ~k~~~C--~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            1 MKPYVC--IHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            367888  78888888888888888888765

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.42  E-value=5.7e-08  Score=43.45  Aligned_cols=26  Identities=35%  Similarity=0.842  Sum_probs=16.8

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhc
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      +||.|  ++|++.|...+.|..|+++|+
T Consensus         2 k~~~C--~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            2 KPFSC--SLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCEEC--SSSSCEESSHHHHHHHHHHCC
T ss_pred             cCccC--CCcChhhCCHHHHHHHHHHcc
Confidence            56666  666666666666666666653

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.41  E-value=2.6e-07  Score=44.22  Aligned_cols=33  Identities=27%  Similarity=0.398  Sum_probs=22.2

Q ss_pred             ccCCCCCccCCCccchhhccChHHHHHHHhhhcCC
Q psy8966           5 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE   39 (175)
Q Consensus         5 ~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~   39 (175)
                      .|+++++|.|.  .|++.|....+|..|+++|.++
T Consensus         3 ~h~~~~~~~C~--~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCD--MCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCT--TTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecC--cCCCCcCchHHHHHHHHHhcCC
Confidence            45666677775  6777777777777777666554

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.40  E-value=1.6e-07  Score=45.27  Aligned_cols=30  Identities=30%  Similarity=0.501  Sum_probs=27.0

Q ss_pred             ccCCcceeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          92 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        92 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                      ..+++||.|+  .|++.|...++|..|+       ||.|
T Consensus         3 ~~gekp~~C~--~CgK~F~~~s~L~~H~-------py~C   32 (36)
T 1fv5_A            3 LLKPARFMCL--PCGIAFSSPSTLEAHQ-------AYYC   32 (36)
T ss_dssp             SSSCCCCEET--TTTEECSCHHHHHHHH-------HHTS
T ss_pred             CCCccCeECC--CCCCccCCHhHccCcC-------CeEC
Confidence            3578999997  9999999999999998       7888

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.40  E-value=7.5e-08  Score=43.61  Aligned_cols=28  Identities=32%  Similarity=0.790  Sum_probs=19.8

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +||.|  ++|++.|.....|..|+++|+++
T Consensus         1 k~~~C--~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 2m0e_A            1 KEHKC--PHCDKKFNQVGNLKAHLKIHIAD   28 (29)
T ss_dssp             CCCCC--SSCCCCCCTTTHHHHHHHHHHSC
T ss_pred             CCCcC--CCCCcccCCHHHHHHHHHHhccC
Confidence            46777  66777777777777777777664

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.40  E-value=6.9e-08  Score=43.78  Aligned_cols=27  Identities=48%  Similarity=1.105  Sum_probs=16.6

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      ||.|  ++|++.|.....|..|+++|+++
T Consensus         2 ~~~C--~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            2 PLKC--RECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CEEC--TTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CccC--CCCCCccCChhHHHHHHHHhcCC
Confidence            5566  55666666666666666666554

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.39  E-value=4.4e-08  Score=43.92  Aligned_cols=25  Identities=36%  Similarity=0.870  Sum_probs=16.4

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHh
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h  152 (175)
                      +||.|  ++|++.|...+.|..|+++|
T Consensus         2 k~~~C--~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRC--PLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEE--TTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCC--CCCCcccCCHHHHHHHHHhc
Confidence            56666  66666666666666666655

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.37  E-value=3.3e-07  Score=43.87  Aligned_cols=33  Identities=39%  Similarity=0.689  Sum_probs=19.9

Q ss_pred             ccCCCCCccCCCccchhhccChHHHHHHHhhhcCC
Q psy8966           5 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE   39 (175)
Q Consensus         5 ~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~   39 (175)
                      .|++++||.|.  .|++.|.....|..|+++|.++
T Consensus         3 ~~~~~k~~~C~--~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            3 SGSSGKIFTCE--YCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TTSCCCCEECT--TTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCCEECC--CCCceeCCHHHHHHHHHHhCCC
Confidence            34556666665  6666666666666666665543

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.36  E-value=2.1e-07  Score=47.90  Aligned_cols=33  Identities=24%  Similarity=0.485  Sum_probs=20.9

Q ss_pred             ccCCCCCccCCCccchhhccChHHHHHHHh-hhcCC
Q psy8966           5 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGE   39 (175)
Q Consensus         5 ~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~-~~~~~   39 (175)
                      +|++++||.|.  .|++.|....+|..|++ +|.++
T Consensus         1 ~Ht~~kp~~C~--~C~k~F~~~~~L~~H~~~~H~~e   34 (48)
T 3iuf_A            1 GEDRDKPYACD--ICGKRYKNRPGLSYHYAHSHLAE   34 (48)
T ss_dssp             -CTTTSCEECT--TTCCEESSHHHHHHHHHHSSCC-
T ss_pred             CCCCCcCEECC--CcCcccCCHHHHHHHhhhhcCCC
Confidence            35666677775  67777777777777766 66554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.36  E-value=7.3e-08  Score=42.98  Aligned_cols=26  Identities=35%  Similarity=0.883  Sum_probs=15.9

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      ||.|  ++|++.|.....|..|+++|++
T Consensus         1 ~~~C--~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKC--GLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBC--SSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccC--CCCCCcCCCHHHHHHHHHHcCC
Confidence            3566  5566666666666666666654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=98.35  E-value=5.4e-07  Score=49.37  Aligned_cols=56  Identities=20%  Similarity=0.485  Sum_probs=46.6

Q ss_pred             eeccCCCcccccCCHHHHHHHH-hhhcCCC------cccCCcccchHHHhchhhHHHHHHHhc
Q psy8966          98 YKCPVEYCEKAFSTQYSRKAHI-RTHTGEK------PYRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus        98 ~~C~~~~C~~~f~~~~~l~~H~-~~h~~~~------~~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      +.|.|..|++.|.+...|..|+ ..|.+.+      +|.|.=..|+..+.....|..|+++.+
T Consensus         2 l~C~W~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            2 LKCKWKECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCTTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CeEeeCCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            5688889999999999999998 5787655      799922289999988899999998753

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.67  E-value=6.7e-08  Score=42.79  Aligned_cols=26  Identities=50%  Similarity=0.977  Sum_probs=21.0

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhc
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      +||.|  ++|++.|...+.|..|+++|+
T Consensus         1 kp~~C--~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVC--ERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            47888  778888888888888888764

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.31  E-value=6e-07  Score=41.66  Aligned_cols=32  Identities=31%  Similarity=0.568  Sum_probs=27.1

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      ++||.|.++.|++.|...+.|..|+++|++++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   32 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEKA   32 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCCC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccCCC
Confidence            36889953379999999999999999998764

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.22  E-value=2e-07  Score=42.60  Aligned_cols=28  Identities=32%  Similarity=0.818  Sum_probs=17.8

Q ss_pred             CcccCCcccchHHHhchhhHHHH-HHHhcCC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKH-VRTHTGK  155 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~  155 (175)
                      +||.|  ++|++.|...+.|..| +++|+++
T Consensus         1 k~~~C--~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            1 KAYAC--GLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CCSBC--TTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CCcCC--cccCcccCChHHHHHHHHHHccCC
Confidence            35666  6666666666666666 4566654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.22  E-value=2.4e-07  Score=41.89  Aligned_cols=26  Identities=38%  Similarity=0.841  Sum_probs=17.0

Q ss_pred             cccCCcc--cchHHHhchhhHHHHHHHhcC
Q psy8966         127 PYRCAHE--FCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       127 ~~~C~~~--~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      ||.|  +  +|++.|...+.|..|+++|++
T Consensus         2 ~~~C--~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            2 VYVC--HFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CEEE--CSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCC--cCCcCcCccCCHHHHHHHHHHhCC
Confidence            5666  5  666666666666666666653

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.22  E-value=1.2e-06  Score=39.67  Aligned_cols=30  Identities=40%  Similarity=0.974  Sum_probs=26.7

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      ++||.|.  .|++.|...+.|..|+++|++++
T Consensus         1 ~k~~~C~--~C~~~f~~~~~l~~H~~~h~~~k   30 (30)
T 2m0d_A            1 MKPYQCD--YCGRSFSDPTSKMRHLETHDTDK   30 (30)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHTTCCCC
T ss_pred             CcCccCC--CCCcccCCHHHHHHHHHHhccCC
Confidence            3689997  89999999999999999998764

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.22  E-value=3.7e-08  Score=46.16  Aligned_cols=31  Identities=26%  Similarity=0.426  Sum_probs=28.5

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCCcc
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPY  128 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~  128 (175)
                      +||.|.  .|++.|...+.|..|+++|++++||
T Consensus         1 kp~~C~--~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACP--ACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSS--SSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCC--CCCcccCCHHHHHHHHHHHccCCCC
Confidence            478896  8999999999999999999999986

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.20  E-value=1.2e-06  Score=39.50  Aligned_cols=29  Identities=31%  Similarity=0.561  Sum_probs=26.0

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 1rik_A            1 YKFACP--ECPKRFMRSDHLTLHILLHENKK   29 (29)
T ss_dssp             CCEECS--SSSCEESCSHHHHHHHTGGGSCC
T ss_pred             CCccCC--CCCchhCCHHHHHHHHHHhcCCC
Confidence            478996  89999999999999999998764

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.18  E-value=1.8e-06  Score=38.81  Aligned_cols=29  Identities=45%  Similarity=0.807  Sum_probs=25.8

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~k   29 (29)
T 1ard_A            1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCCBCT--TTCCBCSSHHHHHHHHHHHSCCC
T ss_pred             CCeECC--CCCcccCCHHHHHHHHHHhcCCC
Confidence            478896  89999999999999999998764

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.17  E-value=1.7e-06  Score=38.87  Aligned_cols=29  Identities=48%  Similarity=0.847  Sum_probs=26.0

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      +||.|.  .|++.|.....|..|+++|++++
T Consensus         1 ~~~~C~--~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2m0f_A            1 GPLKCR--ECGKQFTTSGNLKRHLRIHSGEK   29 (29)
T ss_dssp             CCEECT--TTSCEESCHHHHHHHHHHHHTCC
T ss_pred             CCccCC--CCCCccCChhHHHHHHHHhcCCC
Confidence            478997  89999999999999999998764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.13  E-value=2e-06  Score=38.92  Aligned_cols=30  Identities=30%  Similarity=0.658  Sum_probs=26.4

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCCc
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP  127 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  127 (175)
                      +||.|.  .|++.|...+.|..|+++|+++++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~h~~~~~   30 (30)
T 1klr_A            1 KTYQCQ--YCEFRSADSSNLKTHIKTKHSKEK   30 (30)
T ss_dssp             CCCCCS--SSSCCCSCSHHHHHHHHHHTSSCC
T ss_pred             CCccCC--CCCCccCCHHHHHHHHHHHccCCC
Confidence            468896  899999999999999999988764

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.11  E-value=2.5e-06  Score=46.92  Aligned_cols=33  Identities=18%  Similarity=0.231  Sum_probs=20.4

Q ss_pred             ccCCCCCccCCCccchhhccChHHHHHHHhhhcCC
Q psy8966           5 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE   39 (175)
Q Consensus         5 ~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~   39 (175)
                      .+.+++||.|.  .|++.|.....|.+|+++|++.
T Consensus         7 ~~~~ekpy~C~--~CgK~F~~~s~L~~H~r~Htg~   39 (66)
T 2epp_A            7 GLREAGILPCG--LCGKVFTDANRLRQHEAQHGVT   39 (66)
T ss_dssp             SCCCCCCCCCT--TTCCCCSCHHHHHHHHHHHTTT
T ss_pred             CCCCccCcCCC--CCCCccCCHHHHHhhhhhhCCC
Confidence            35556666665  6666666666666666666554

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.09  E-value=2e-06  Score=38.59  Aligned_cols=29  Identities=34%  Similarity=0.715  Sum_probs=25.8

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~--~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCP--HCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCS--SCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCC--CCCcccCCHHHHHHHHHHhccCC
Confidence            478896  89999999999999999998764

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.07  E-value=2.9e-06  Score=37.82  Aligned_cols=28  Identities=46%  Similarity=0.944  Sum_probs=24.8

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                      ++||.|.  .|++.|...+.|..|+++|++
T Consensus         1 ~k~~~C~--~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCS--VCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECS--SSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCC--CCCcccCCHHHHHHHHHhcCC
Confidence            3689996  899999999999999998864

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.06  E-value=3.3e-06  Score=37.34  Aligned_cols=27  Identities=26%  Similarity=0.607  Sum_probs=24.1

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhc
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHT  123 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  123 (175)
                      ++||.|.  .|++.|...+.|..|+++|+
T Consensus         1 ek~~~C~--~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCS--LCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCC--CcChhhCCHHHHHHHHHHcc
Confidence            3689997  89999999999999998874

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.02  E-value=2.8e-06  Score=37.68  Aligned_cols=27  Identities=37%  Similarity=0.853  Sum_probs=24.0

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhc
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHT  123 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  123 (175)
                      ++||.|+  .|++.|...+.|..|+++|+
T Consensus         1 ~k~~~C~--~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCP--LCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEET--TTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCC--CCCcccCCHHHHHHHHHhcC
Confidence            3689997  89999999999999998873

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.00  E-value=4.6e-06  Score=36.73  Aligned_cols=27  Identities=33%  Similarity=0.748  Sum_probs=23.0

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhhhcCC
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRTHTGE  125 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  125 (175)
                      ||.|.  .|++.|...+.|..|+++|+++
T Consensus         1 ~~~C~--~C~k~f~~~~~l~~H~~~h~~~   27 (27)
T 1znf_A            1 XYKCG--LCERSFVEKSALSRHQRVHKNX   27 (27)
T ss_dssp             -CBCS--SSCCBCSSHHHHHHHGGGTCC-
T ss_pred             CccCC--CCCCcCCCHHHHHHHHHHcCCC
Confidence            57886  8999999999999999999763

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.25  E-value=7.9e-07  Score=40.17  Aligned_cols=29  Identities=52%  Similarity=0.913  Sum_probs=25.6

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      +||.|.  .|++.|...++|..|+++|++++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~H~~~k   29 (29)
T 2lvt_A            1 KPCQCV--MCGKAFTQASSLIAHVRQHTGEK   29 (29)
Confidence            478896  89999999999999999998754

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.00  E-value=5.3e-06  Score=37.17  Aligned_cols=29  Identities=31%  Similarity=0.651  Sum_probs=24.7

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                      +||.|.++.|++.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            36888555899999999999999999864

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.22  E-value=9.7e-07  Score=40.11  Aligned_cols=29  Identities=41%  Similarity=0.891  Sum_probs=25.8

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      +||.|.  .|++.|...+.|..|+++|++++
T Consensus         2 k~~~C~--~C~k~f~~~~~l~~H~~~h~~~k   30 (30)
T 2lvr_A            2 KPYVCI--HCQRQFADPGALQRHVRIHTGEK   30 (30)
Confidence            588996  89999999999999999998753

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=97.93  E-value=4.6e-06  Score=37.75  Aligned_cols=29  Identities=28%  Similarity=0.654  Sum_probs=25.2

Q ss_pred             cceeccCCCcccccCCHHHHHHH-HhhhcCCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAH-IRTHTGEK  126 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H-~~~h~~~~  126 (175)
                      +||.|.  .|++.|...+.|..| +++|++++
T Consensus         1 k~~~C~--~C~k~f~~~~~l~~H~~~~H~~~~   30 (30)
T 1paa_A            1 KAYACG--LCNRAFTRRDLLIRHAQKIHSGNL   30 (30)
T ss_dssp             CCSBCT--TTCCBCSSSHHHHHHHTTTSCCCC
T ss_pred             CCcCCc--ccCcccCChHHHHHHHHHHccCCC
Confidence            478896  899999999999999 78998764

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=96.96  E-value=3.5e-06  Score=36.90  Aligned_cols=26  Identities=38%  Similarity=0.780  Sum_probs=23.1

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhc
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHT  123 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  123 (175)
                      +||.|+  .|++.|...+.|..|+++|+
T Consensus         1 kp~~C~--~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCE--RCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            478996  89999999999999998873

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.63  E-value=0.00019  Score=44.21  Aligned_cols=31  Identities=23%  Similarity=0.344  Sum_probs=18.8

Q ss_pred             hhccCCcceeccCCCcccccCCHHHHHHHHhhh
Q psy8966          90 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTH  122 (175)
Q Consensus        90 ~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h  122 (175)
                      ..++|++||.|.  .|++.|.+.+.|..|.++.
T Consensus        43 ed~tGekpfyC~--~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           43 PDLPGGGLHRCL--ACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSSGGGGCSEET--TTTEECSSHHHHHHHTTCH
T ss_pred             ccCCCCcceEcc--cCcchhCCHHHHHHHHhhh
Confidence            345566666664  5666666666666665544

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=95.90  E-value=0.0024  Score=39.33  Aligned_cols=31  Identities=29%  Similarity=0.477  Sum_probs=28.1

Q ss_pred             HhhhcCCCcccCCcccchHHHhchhhHHHHHHH
Q psy8966         119 IRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRT  151 (175)
Q Consensus       119 ~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~  151 (175)
                      ...|+|++||.|  ..|++.|.+...|..|+++
T Consensus        42 ded~tGekpfyC--~~C~K~F~~~~~L~~H~rs   72 (124)
T 1zr9_A           42 DPDLPGGGLHRC--LACARYFIDSTNLKTHFRS   72 (124)
T ss_dssp             CSSSGGGGCSEE--TTTTEECSSHHHHHHHTTC
T ss_pred             cccCCCCcceEc--ccCcchhCCHHHHHHHHhh
Confidence            456889999999  8999999999999999975

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=95.03  E-value=0.017  Score=35.87  Aligned_cols=52  Identities=19%  Similarity=0.466  Sum_probs=38.3

Q ss_pred             CcceeccCCCcccccCCHHHHHHHH--hhhc-------------------------------CCCcccCCcccchHHHhc
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHI--RTHT-------------------------------GEKPYRCAHEFCSKSFKT  141 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~--~~h~-------------------------------~~~~~~C~~~~C~~~f~~  141 (175)
                      .+++.|.  .|+..|.+.+.+..|.  +.|.                               +...|.|  ..|+..|.+
T Consensus        30 ~~~~~C~--~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~~f~s  105 (127)
T 1zu1_A           30 FSDTQCK--VCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCC--PVCNMTFSS  105 (127)
T ss_dssp             BCSSEET--TTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEE--TTTTEECSS
T ss_pred             CCCCcCc--CCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEc--CCCCCEeCC
Confidence            4578897  8999999999999997  3331                               1234667  777777777


Q ss_pred             hhhHHHHHH
Q psy8966         142 SGDLQKHVR  150 (175)
Q Consensus       142 ~~~l~~H~~  150 (175)
                      ...+..|..
T Consensus       106 ~~~~~~H~~  114 (127)
T 1zu1_A          106 PVVAESHYI  114 (127)
T ss_dssp             HHHHHHHHT
T ss_pred             HHHHHHHHC
Confidence            777777764

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=94.97  E-value=0.034  Score=34.45  Aligned_cols=52  Identities=17%  Similarity=0.421  Sum_probs=41.2

Q ss_pred             CCccCCCccchhhccChHHHHHHHh--hh-------------------------------cCCCCeeccccccCcccCCh
Q psy8966          10 RPYKCPVEYCEKAFSTQYSRKAHIR--TH-------------------------------TGEKPYRCAHEFCSKSFKTS   56 (175)
Q Consensus        10 ~~~~C~~~~C~~~f~~~~~L~~h~~--~~-------------------------------~~~~~~~C~~~~C~~~f~~~   56 (175)
                      +++.|.  .|+..|.+.+.+..|..  .|                               .+...+.|  ++|+..|.+.
T Consensus        31 ~~~~C~--~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C--~~C~~~f~s~  106 (127)
T 1zu1_A           31 SDTQCK--VCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCC--PVCNMTFSSP  106 (127)
T ss_dssp             CSSEET--TTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEE--TTTTEECSSH
T ss_pred             CCCcCc--CCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEc--CCCCCEeCCH
Confidence            568897  99999999999999972  22                               12345789  5599999999


Q ss_pred             HHHHHHHHH
Q psy8966          57 GDLQKHVRT   65 (175)
Q Consensus        57 ~~l~~H~~~   65 (175)
                      ..+..|+..
T Consensus       107 ~~~~~H~~g  115 (127)
T 1zu1_A          107 VVAESHYIG  115 (127)
T ss_dssp             HHHHHHHTS
T ss_pred             HHHHHHHCC
Confidence            999999754

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.88  E-value=0.011  Score=29.36  Aligned_cols=23  Identities=22%  Similarity=0.515  Sum_probs=11.8

Q ss_pred             cceeccCCCcccccCCHHHHHHHHh
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIR  120 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~  120 (175)
                      .++.||  .|+..|+....|..|++
T Consensus        11 ~~~~CP--rCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICP--RCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCT--TTCCCCSSHHHHHHHHH
T ss_pred             CceeCC--cccccccchHHHHhhhh
Confidence            344554  55555555555555544

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=94.78  E-value=0.05  Score=27.07  Aligned_cols=27  Identities=19%  Similarity=0.348  Sum_probs=23.3

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      -+|.|  +.|+..|.....|+.||+---+
T Consensus        11 ~~~~C--PrCn~~f~~~~sLr~HmkycCp   37 (49)
T 2e72_A           11 GRKIC--PRCNAQFRVTEALRGHMCYCCP   37 (49)
T ss_dssp             SCCCC--TTTCCCCSSHHHHHHHHHHHCT
T ss_pred             CceeC--CcccccccchHHHHhhhhhcCc
Confidence            57899  8899999999999999995433

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=93.30  E-value=0.066  Score=34.78  Aligned_cols=49  Identities=18%  Similarity=0.394  Sum_probs=21.0

Q ss_pred             CcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCc
Q psy8966         104 YCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY  156 (175)
Q Consensus       104 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  156 (175)
                      .|+..+ ....|..|....-..++-.|  +.|+..+. ..+|..|..++.|+.
T Consensus       115 ~C~~~~-~r~~l~~H~~~~C~~r~~~C--~~C~~~~~-~~~l~~H~~~~~~~~  163 (170)
T 3hcs_A          115 QCQRPF-QKFHINIHILKDCPRRQVSC--DNCAASMA-FEDKEIHDQNCPLAL  163 (170)
T ss_dssp             TTCCEE-EGGGHHHHHHHTCTTCEEEC--TTTCCEEE-GGGHHHHHTTCCC--
T ss_pred             CCChHH-HHHHHHHHhhhhCCCCCeEC--CCCCCccC-HHHHHhHHHhCcChh
Confidence            454444 22344445444444444445  44544332 234445555444443

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=92.69  E-value=0.066  Score=34.81  Aligned_cols=70  Identities=16%  Similarity=0.220  Sum_probs=53.3

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchhhhcc
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSILDCLS  169 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~~~~~  169 (175)
                      +....|+...|+.... ...+..|.. .-.-.+..|  +.|+..+ .+..|..|+...-+..+-.|+.|+..+..
T Consensus        80 ~l~v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C--~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~  149 (170)
T 3hcs_A           80 SLMVKCPNEGCLHKME-LRHLEDHQA-HCEFALMDC--PQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF  149 (170)
T ss_dssp             TSEEECCSTTCCCEEE-GGGHHHHHT-TCTTSEEEC--TTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG
T ss_pred             hcccCCCCCCCCceec-HhHHHHHHh-cCCceeeEC--CCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH
Confidence            4566786567888765 457888863 334567899  8899887 67789999988888899999999876544

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=90.85  E-value=0.094  Score=24.30  Aligned_cols=21  Identities=33%  Similarity=0.680  Sum_probs=11.6

Q ss_pred             ccCCcccchHHHhchhhHHHHHH
Q psy8966         128 YRCAHEFCSKSFKTSGDLQKHVR  150 (175)
Q Consensus       128 ~~C~~~~C~~~f~~~~~l~~H~~  150 (175)
                      |.|  ++|.+.+.+...|..|..
T Consensus         6 FiC--P~C~~~l~s~~~L~~Hye   26 (34)
T 3mjh_B            6 FIC--PQCMKSLGSADELFKHYE   26 (34)
T ss_dssp             EEC--TTTCCEESSHHHHHHHHH
T ss_pred             cCC--cHHHHHcCCHHHHHHHHH
Confidence            555  555555555555555554

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=84.53  E-value=1.5  Score=20.40  Aligned_cols=23  Identities=22%  Similarity=0.356  Sum_probs=13.9

Q ss_pred             CCccCCCccchhhccChHHHHHHHh
Q psy8966          10 RPYKCPVEYCEKAFSTQYSRKAHIR   34 (175)
Q Consensus        10 ~~~~C~~~~C~~~f~~~~~L~~h~~   34 (175)
                      ..+.|.  .|+.+|.....+..|.+
T Consensus         7 ~~~~C~--~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCS--TCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEET--TTTEECSSHHHHHHHHH
T ss_pred             CcCeec--cccceehhhHHHhhhhe
Confidence            345564  66666666666666654

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=81.97  E-value=0.27  Score=32.99  Aligned_cols=25  Identities=24%  Similarity=0.323  Sum_probs=19.1

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchh
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSIL  165 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~  165 (175)
                      ..|.|  .+||+.+.             |+.|..||.||.
T Consensus       170 ~~~~C--~~CG~i~~-------------g~~p~~CP~C~~  194 (202)
T 1yuz_A          170 KFHLC--PICGYIHK-------------GEDFEKCPICFR  194 (202)
T ss_dssp             CEEEC--SSSCCEEE-------------SSCCSBCTTTCC
T ss_pred             cEEEE--CCCCCEEc-------------CcCCCCCCCCCC
Confidence            45999  88997654             357889999985

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=81.36  E-value=0.26  Score=28.13  Aligned_cols=28  Identities=29%  Similarity=0.495  Sum_probs=18.5

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcCCCc
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKP  127 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~  127 (175)
                      ..-..|.  +||+.|..   |.+|..+++|..|
T Consensus        19 ~d~iiCl--ecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           19 DDHIVCL--ECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             SSCEECT--BTCCEESB---HHHHHHHTTCSCH
T ss_pred             CCceEec--ccchhhHH---HHHHHHHccCCCH
Confidence            3445665  78887764   5578777667666

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	175
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-08
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-08
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	2e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-07
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	6e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	8e-08
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-06
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	2e-07
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	8e-05
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	8e-05
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-07
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	3e-07
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-06
d1sp2a_	31	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	2e-06
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	6e-05
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-07
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	3e-07
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-06
d1zfda_	32	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	2e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	4e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	8e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	6e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-05
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-05
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	8e-07
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	8e-07
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-06
d2glia3	30	g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo	1e-06
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-06
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	2e-06
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	6e-06
d1a1ia1	29	g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus)	6e-06
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	5e-06
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	5e-06
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	1e-05
d1ubdc4	28	g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger	1e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	6e-06
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	6e-06
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-05
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	1e-05
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-06
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	7e-06
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	7e-06
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	7e-06
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	9e-06
d1ubdc3	30	g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger	9e-06
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	1e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-04
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	7e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-05
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.001
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.001
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	2e-05
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	1e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	6e-04
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (109), Expect = 2e-08
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 12 YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 44
          + CP   C K+F+ +   K H++ H+  + Y C
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 45.9 bits (109), Expect = 2e-08
 Identities = 10/33 (30%), Positives = 18/33 (54%)

Query: 98  YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC 130
           + CP   C K+F+ +   K H++ H+  + Y C
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 2e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 42 YRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          + C    C KSF     L++H++ H+ 
Sbjct: 2  FSCPEPACGKSFNFKKHLKEHMKLHSD 28

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.1 bits (81), Expect = 2e-04
 Identities = 8/27 (29%), Positives = 14/27 (51%)

Query: 128 YRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           + C    C KSF     L++H++ H+ 
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSD 28

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (107), Expect = 4e-08
 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 36 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          H+GEKPY C    C K+F  S  L +H R HTG
Sbjct: 2  HSGEKPYGC--VECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.9 bits (107), Expect = 4e-08
 Identities = 17/33 (51%), Positives = 20/33 (60%), Gaps = 2/33 (6%)

Query: 122 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           H+GEKPY C    C K+F  S  L +H R HTG
Sbjct: 2   HSGEKPYGC--VECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (99), Expect = 6e-07
 Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 5  IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 39
          IHSG +PY C    C KAFS       H R HTGE
Sbjct: 1  IHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.8 bits (99), Expect = 6e-07
 Identities = 18/35 (51%), Positives = 19/35 (54%), Gaps = 2/35 (5%)

Query: 91  IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 125
           IHSG +PY C    C KAFS       H R HTGE
Sbjct: 1   IHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGE 33

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 8e-08
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 34 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          RTHTGEKPY C    C K+F+    L  H + +   
Sbjct: 1  RTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (105), Expect = 8e-08
 Identities = 15/36 (41%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           RTHTGEKPY C    C K+F+    L  H + +   
Sbjct: 1   RTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 4e-06
 Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 4  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 40
          R H+G +PY C   +C+K F  +     H + +    
Sbjct: 1  RTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (93), Expect = 4e-06
 Identities = 10/37 (27%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
           R H+G +PY C   +C+K F  +     H + +    
Sbjct: 1   RTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDPN 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (102), Expect = 2e-07
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
            R  TG KP++C    C +SF  S  L  H + H  
Sbjct: 2  STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 43.2 bits (102), Expect = 2e-07
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
             R  TG KP++C    C +SF  S  L  H + H  
Sbjct: 2   STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (84), Expect = 8e-05
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG 38
            R  +GI+P++C    C+++FS       H + H  
Sbjct: 2  STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (84), Expect = 8e-05
 Identities = 10/37 (27%), Positives = 18/37 (48%), Gaps = 2/37 (5%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG 124
             R  +GI+P++C    C+++FS       H + H  
Sbjct: 2   STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHML 36

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 3e-07
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 40
          RP+ C   YC K F+     + H RTHTGEK
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 3e-07
 Identities = 15/31 (48%), Positives = 18/31 (58%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
           RP+ C   YC K F+     + H RTHTGEK
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK 31

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 2e-06
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 40 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +P+ C   +C K F  S +LQ+H RTHTG
Sbjct: 1  RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 31

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.8 bits (96), Expect = 2e-06
 Identities = 14/29 (48%), Positives = 19/29 (65%)

Query: 126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +P+ C   +C K F  S +LQ+H RTHTG
Sbjct: 1   RPFMCTWSYCGKRFTRSDELQRHKRTHTG 29

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (102), Expect = 3e-07
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 34 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          RTH+GEKPY C    C   F  SG ++ H+     +
Sbjct: 1  RTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.0 bits (102), Expect = 3e-07
 Identities = 14/36 (38%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           RTH+GEKPY C    C   F  SG ++ H+     +
Sbjct: 1   RTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTE 34

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 6e-05
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 4  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 40
          R HSG +PY+C    C   F+   + K HI     E 
Sbjct: 1  RTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (85), Expect = 6e-05
 Identities = 13/37 (35%), Positives = 17/37 (45%), Gaps = 2/37 (5%)

Query: 90  RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
           R HSG +PY+C    C   F+   + K HI     E 
Sbjct: 1   RTHSGEKPYEC--YICHARFTQSGTMKMHILQKHTEN 35

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.7 bits (101), Expect = 3e-07
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 39 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 69
          ++PY C H  C K+F  + DL +H ++H  K
Sbjct: 1  DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 42.7 bits (101), Expect = 3e-07
 Identities = 12/31 (38%), Positives = 19/31 (61%)

Query: 125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK 155
           ++PY C H  C K+F  + DL +H ++H  K
Sbjct: 1   DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.4 bits (95), Expect = 2e-06
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 39
          RPY C    C+KAF   +    H ++H  +
Sbjct: 2  RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 32

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 40.4 bits (95), Expect = 2e-06
 Identities = 10/30 (33%), Positives = 15/30 (50%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 125
           RPY C    C+KAF   +    H ++H  +
Sbjct: 2   RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK 31

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 4e-07
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 7  SGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRC 44
          S  +PY C  + C K FS       HI+  HT E+P++C
Sbjct: 1  SVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 4e-07
 Identities = 15/39 (38%), Positives = 21/39 (53%), Gaps = 3/39 (7%)

Query: 93  SGIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRC 130
           S  +PY C  + C K FS       HI+  HT E+P++C
Sbjct: 1   SVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (82), Expect = 2e-04
 Identities = 15/66 (22%), Positives = 23/66 (34%), Gaps = 27/66 (40%)

Query: 37  TGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTPGPGIDSRLIVREDFVHLRIHSGIR 96
           +  KPY C  + C K F     L  H++                         ++H+  R
Sbjct: 1   SVGKPYIC--QSCGKGFSRPDHLNGHIK-------------------------QVHTSER 33

Query: 97  PYKCPV 102
           P+KC V
Sbjct: 34  PHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 8e-04
 Identities = 11/33 (33%), Positives = 15/33 (45%), Gaps = 3/33 (9%)

Query: 123 TGEKPYRCAHEFCSKSFKTSGDLQKHVR-THTG 154
           +  KPY C  + C K F     L  H++  HT 
Sbjct: 1   SVGKPYIC--QSCGKGFSRPDHLNGHIKQVHTS 31

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (99), Expect = 6e-07
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
                  + Y+C  + C KSF  S DL KH RTHTG
Sbjct: 3  SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.1 bits (99), Expect = 6e-07
 Identities = 16/37 (43%), Positives = 19/37 (51%), Gaps = 2/37 (5%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
                   + Y+C  + C KSF  S DL KH RTHTG
Sbjct: 3   SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 2e-05
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 39
                  R YKC  + C K+FS       H RTHTGE
Sbjct: 3  SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.2 bits (89), Expect = 2e-05
 Identities = 15/38 (39%), Positives = 17/38 (44%), Gaps = 2/38 (5%)

Query: 88  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 125
                   R YKC  + C K+FS       H RTHTGE
Sbjct: 3   SEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGE 38

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 8e-07
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 40 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          KP++C  E C KS+    +L+ H+R+HTG
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.6 bits (98), Expect = 8e-07
 Identities = 13/29 (44%), Positives = 20/29 (68%)

Query: 126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           KP++C  E C KS+    +L+ H+R+HTG
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTG 29

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 1e-06
 Identities = 14/30 (46%), Positives = 21/30 (70%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 39
          +P+KC  E C K++S   + K H+R+HTGE
Sbjct: 1  KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.2 bits (97), Expect = 1e-06
 Identities = 14/30 (46%), Positives = 21/30 (70%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 125
           +P+KC  E C K++S   + K H+R+HTGE
Sbjct: 1   KPHKCTFEGCRKSYSRLENLKTHLRSHTGE 30

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.4 bits (95), Expect = 2e-06
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 40 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +PY C  E C + F  S DL +H+R HTG
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 40.4 bits (95), Expect = 2e-06
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +PY C  E C + F  S DL +H+R HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.2 bits (92), Expect = 6e-06
 Identities = 16/29 (55%), Positives = 18/29 (62%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTG 38
          RPY CPVE C++ FS       HIR HTG
Sbjct: 1  RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 39.2 bits (92), Expect = 6e-06
 Identities = 16/29 (55%), Positives = 18/29 (62%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTG 124
           RPY CPVE C++ FS       HIR HTG
Sbjct: 1   RPYACPVESCDRRFSRSADLTRHIRIHTG 29

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 5e-06
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 40 KPYRCAHEFCSKSFKTSGDLQKHVRTHT 67
          +PY C  + C+K F  S +L+ H+ TH 
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.3 bits (92), Expect = 5e-06
 Identities = 11/28 (39%), Positives = 17/28 (60%)

Query: 126 KPYRCAHEFCSKSFKTSGDLQKHVRTHT 153
           +PY C  + C+K F  S +L+ H+ TH 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 1e-05
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHT 37
          RPY CP + C K F+   + K+HI TH 
Sbjct: 1  RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 1e-05
 Identities = 13/28 (46%), Positives = 17/28 (60%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHT 123
           RPY CP + C K F+   + K+HI TH 
Sbjct: 1   RPYVCPFDGCNKKFAQSTNLKSHILTHA 28

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.5 bits (92), Expect = 6e-06
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 32 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
                 +K + C    C+K+FK   +++ H++TH  
Sbjct: 9  KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 39.5 bits (92), Expect = 6e-06
 Identities = 9/37 (24%), Positives = 18/37 (48%)

Query: 118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
                  +K + C    C+K+FK   +++ H++TH  
Sbjct: 9   KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE 45

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.8 bits (90), Expect = 1e-05
 Identities = 10/44 (22%), Positives = 20/44 (45%)

Query: 83  REDFVHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
           R            + ++C    C K F  +Y+ ++HI+TH  ++
Sbjct: 4   RGSIDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 38.8 bits (90), Expect = 1e-05
 Identities = 9/39 (23%), Positives = 19/39 (48%)

Query: 2  HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 40
                  + ++C    C K F  +Y+ ++HI+TH  ++
Sbjct: 9  KYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 7e-06
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 66
          + Y C    C K+F+ +  R  H+  H G +PY C    C K FK    L  H++ H
Sbjct: 2  KLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.7 bits (92), Expect = 7e-06
 Identities = 19/57 (33%), Positives = 27/57 (47%), Gaps = 5/57 (8%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH 152
           + Y C    C K+F+ +  R  H+  H G +PY C    C K FK    L  H++ H
Sbjct: 2   KLYPCQ---CGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMKIH 53

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 7e-06
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 40 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          KP++C  E C K F    +L+ HVR HTG
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 7e-06
 Identities = 14/29 (48%), Positives = 18/29 (62%)

Query: 126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           KP++C  E C K F    +L+ HVR HTG
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTG 29

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 9e-06
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 39
          +P++C  E C K FS  ++ + H+R HTG+
Sbjct: 1  KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]} Length = 30

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.5 bits (90), Expect = 9e-06
 Identities = 12/30 (40%), Positives = 20/30 (66%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 125
           +P++C  E C K FS  ++ + H+R HTG+
Sbjct: 1   KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD 30

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (90), Expect = 1e-05
 Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 36 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT 71
           +G++P+ C    C  +F T  +  +H++ HT   +
Sbjct: 2  SSGKRPFVC--RICLSAFTTKANCARHLKVHTDTLS 35

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.6 bits (90), Expect = 1e-05
 Identities = 9/36 (25%), Positives = 19/36 (52%), Gaps = 2/36 (5%)

Query: 122 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYT 157
            +G++P+ C    C  +F T  +  +H++ HT   +
Sbjct: 2   SSGKRPFVC--RICLSAFTTKANCARHLKVHTDTLS 35

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 7e-04
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 6  HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 39
           SG RP+ C    C  AF+T+ +   H++ HT  
Sbjct: 2  SSGKRPFVC--RICLSAFTTKANCARHLKVHTDT 33

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.6 bits (77), Expect = 7e-04
 Identities = 12/34 (35%), Positives = 18/34 (52%), Gaps = 2/34 (5%)

Query: 92  HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE 125
            SG RP+ C    C  AF+T+ +   H++ HT  
Sbjct: 2   SSGKRPFVC--RICLSAFTTKANCARHLKVHTDT 33

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.6 bits (88), Expect = 2e-05
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 39 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          +KP++C    C ++F  S  L  H+RTHTG
Sbjct: 1  QKPFQC--RICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 37.6 bits (88), Expect = 2e-05
 Identities = 13/30 (43%), Positives = 19/30 (63%), Gaps = 2/30 (6%)

Query: 125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           +KP++C    C ++F  S  L  H+RTHTG
Sbjct: 1   QKPFQC--RICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.0 bits (76), Expect = 0.001
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTG 38
          +P++C    C + FS       HIRTHTG
Sbjct: 2  KPFQC--RICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.0 bits (76), Expect = 0.001
 Identities = 12/29 (41%), Positives = 16/29 (55%), Gaps = 2/29 (6%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTG 124
           +P++C    C + FS       HIRTHTG
Sbjct: 2   KPFQC--RICMRNFSRSDHLTTHIRTHTG 28

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 37.6 bits (88), Expect = 2e-05
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 40
          R + C  E C +AF+ Q   K H R+HT EK
Sbjct: 1  RSFVC--EVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 37.6 bits (88), Expect = 2e-05
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 2/31 (6%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
           R + C  E C +AF+ Q   K H R+HT EK
Sbjct: 1   RSFVC--EVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.3 bits (82), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 40 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          + + C  E C+++F     L++H R+HT 
Sbjct: 1  RSFVC--EVCTRAFARQEHLKRHYRSHTN 27

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 35.3 bits (82), Expect = 1e-04
 Identities = 9/29 (31%), Positives = 17/29 (58%), Gaps = 2/29 (6%)

Query: 126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           + + C  E C+++F     L++H R+HT 
Sbjct: 1   RSFVC--EVCTRAFARQEHLKRHYRSHTN 27

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)

Query: 10 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 40
          + + CP   C K F        HI+TH  +K
Sbjct: 1  KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 6e-04
 Identities = 10/31 (32%), Positives = 14/31 (45%), Gaps = 2/31 (6%)

Query: 96  RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK 126
           + + CP   C K F        HI+TH  +K
Sbjct: 1   KKFACPE--CPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 40 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 68
          K + C    C K F  S  L KH++TH  
Sbjct: 1  KKFAC--PECPKRFMRSDHLSKHIKTHQN 27

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 11/29 (37%), Positives = 14/29 (48%), Gaps = 2/29 (6%)

Query: 126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG 154
           K + C    C K F  S  L KH++TH  
Sbjct: 1   KKFAC--PECPKRFMRSDHLSKHIKTHQN 27

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	175
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.71
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.59
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.45
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.45
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.43
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.33
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.31
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.29
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.29
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.27
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.24
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.23
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.22
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.22
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.22
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.21
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.19
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.17
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.16
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.16
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.1
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.09
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.09
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.07
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.06
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.05
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.04
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.04
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.02
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.02
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	98.97
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.95
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.94
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.91
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.9
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.88
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.82
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.8
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.78
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.78
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.47
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.34
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.31
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.25
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.18
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.15
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.14
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.08
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.06
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	98.0
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.97
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.9
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	97.82
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.81
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	97.79
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.76
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.74
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.73
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.64
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.55
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.53
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.51
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.44
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.44
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.38
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.37
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.37
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.34
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.32
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.31
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.3
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.21
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.19
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.17
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.09
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.05
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.04
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.95
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	96.87
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	96.76
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.61
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.51
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.49
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.45
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.42
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.41
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.28
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.24
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.16
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	95.94
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.76
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.6
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.55
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	95.49
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.96
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	94.7
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	94.7
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	94.36
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.26
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	93.82
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	93.46
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.38
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	93.21
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	92.96
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	92.61
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	91.88
d1y0jb1	36	U-shaped transcription factor, different fingers {	91.7
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	90.91
d2glia1	32	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	89.98
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	89.64
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	89.61
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	89.1
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	87.2
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	87.14
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	86.67
d1wjpa2	26	Zinc finger protein 295, ZNF295 {Human (Homo sapie	82.33

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.71  E-value=2.7e-18  Score=90.45  Aligned_cols=53  Identities=36%  Similarity=0.794  Sum_probs=50.7

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHh
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h  152 (175)
                      ++||.|   +||+.|...++|..|+++|++++||.|  ++||++|.+.+.|.+|+++|
T Consensus         1 EK~y~C---~Cgk~F~~~~~l~~H~~~Ht~ekpy~C--~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGC--GVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC---TTSCEESSHHHHHHHHHHHSCCCSEEC--TTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC---CCCCeECCHHHhHHHhhccccccCCcC--CCcCCEecCHHHHHHHHhcC
Confidence            579999   499999999999999999999999999  99999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.59  E-value=7e-16  Score=80.99  Aligned_cols=53  Identities=36%  Similarity=0.789  Sum_probs=50.0

Q ss_pred             CCCccCCCccchhhccChHHHHHHHhhhcCCCCeeccccccCcccCChHHHHHHHHHh
Q psy8966           9 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTH   66 (175)
Q Consensus         9 ~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h   66 (175)
                      |+||.|   .||++|....+|..|+++|+++++|.|..  |++.|...+.|..|+++|
T Consensus         1 EK~y~C---~Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~--C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPC---QCGKSFTHKSQRDRHMSMHLGLRPYGCGV--CGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEEC---TTSCEESSHHHHHHHHHHHSCCCSEECTT--TSCEESSSHHHHHHHTTT
T ss_pred             CcCCCC---CCCCeECCHHHhHHHhhccccccCCcCCC--cCCEecCHHHHHHHHhcC
Confidence            689999   59999999999999999999999999965  999999999999999876

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.7e-15  Score=73.19  Aligned_cols=37  Identities=43%  Similarity=0.760  Sum_probs=30.6

Q ss_pred             HHHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         117 AHIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       117 ~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +|+.+|++++||+|  ++||++|...++|.+|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C--~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKC--DECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBC--SSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEec--CCCCceeeCHHHHHHhCccCCCC
Confidence            46778888888888  77888888888888888888876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.45  E-value=1.1e-14  Score=70.07  Aligned_cols=37  Identities=30%  Similarity=0.600  Sum_probs=26.4

Q ss_pred             CCCcccCCcccchHHHhchhhHHHHHH-HhcCCccccCCc
Q psy8966         124 GEKPYRCAHEFCSKSFKTSGDLQKHVR-THTGKYTAEVPG  162 (175)
Q Consensus       124 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  162 (175)
                      .+|||+|  ++||++|..+++|.+|++ +|++++||.|++
T Consensus         2 ~~Kpy~C--~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYIC--QSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEEC--SSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccC--CCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            3577777  677777777777777765 577777777763

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=1.4e-14  Score=67.11  Aligned_cols=33  Identities=52%  Similarity=0.927  Sum_probs=28.8

Q ss_pred             hhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         121 THTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       121 ~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +|++++||+|  .+||++|..+++|..|+++|+||
T Consensus         1 IHTgekpy~C--~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGC--VECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEEC--SSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeC--CCCCCEeCchHHhHhhccccCCC
Confidence            4788899999  88999999999999999999886

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=1.5e-13  Score=65.21  Aligned_cols=34  Identities=44%  Similarity=0.844  Sum_probs=28.3

Q ss_pred             hhhcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       120 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      ++|+|++||+|  ++|+++|..++.|..|+++|+++
T Consensus         1 R~HTgekPy~C--~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYAC--SHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEEC--SSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEEC--CCCCCCcCCHhHHHHhCcccCCC
Confidence            46888888888  78888888888888888888765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.31  E-value=7.5e-13  Score=63.66  Aligned_cols=37  Identities=41%  Similarity=0.558  Sum_probs=33.1

Q ss_pred             CcccccCCCCCccCCCccchhhccChHHHHHHHhhhcCC
Q psy8966           1 VHLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE   39 (175)
Q Consensus         1 ~~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~   39 (175)
                      .|+++|++++||.|.  .||++|...++|.+|+++|+|+
T Consensus         2 rH~~~Ht~ekpy~C~--~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCD--ECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCS--SSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecC--CCCceeeCHHHHHHhCccCCCC
Confidence            488999999999997  8999999999999999999874

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.29  E-value=1.7e-13  Score=65.53  Aligned_cols=35  Identities=37%  Similarity=0.654  Sum_probs=27.0

Q ss_pred             HHhhhcCCCcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         118 HIRTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       118 H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      |.++|++++||+|  ++|+++|.++++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C--~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQC--PDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCC--TTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEe--CCCCCEecCHHHHHHHHhcCcC
Confidence            5667788888888  7788888888888888877753

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.29  E-value=1.3e-12  Score=62.72  Aligned_cols=35  Identities=40%  Similarity=0.804  Sum_probs=32.5

Q ss_pred             CCcceeccCCCcccccCCHHHHHHHHh-hhcCCCcccC
Q psy8966          94 GIRPYKCPVEYCEKAFSTQYSRKAHIR-THTGEKPYRC  130 (175)
Q Consensus        94 ~~~~~~C~~~~C~~~f~~~~~l~~H~~-~h~~~~~~~C  130 (175)
                      .++||.|.  .||+.|...++|.+|++ +|++++||+|
T Consensus         2 ~~Kpy~C~--~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C   37 (39)
T d2epsa1           2 VGKPYICQ--SCGKGFSRPDHLNGHIKQVHTSERPHKC   37 (39)
T ss_dssp             SSCCEECS--SSCCEESSHHHHHHHHHHTSCCCCCCCS
T ss_pred             CCCCccCC--CCCCCcCChHHhhccCcCccCCCcCcCC
Confidence            47899997  99999999999999975 7999999999

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.27  E-value=4.7e-13  Score=62.66  Aligned_cols=32  Identities=28%  Similarity=0.818  Sum_probs=25.5

Q ss_pred             hcCCCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         122 HTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       122 h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      |+|++||+|  ++|++.|.++++|.+|+++|+.+
T Consensus         2 ~TGekPy~C--~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVC--RICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEEC--SSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccC--CCCCCcccChHHHHHHccccCCc
Confidence            567888888  77888888888888888888765

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.24  E-value=3e-12  Score=61.08  Aligned_cols=35  Identities=31%  Similarity=0.679  Sum_probs=31.3

Q ss_pred             cccccCCCCCccCCCccchhhccChHHHHHHHhhhcC
Q psy8966           2 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTG   38 (175)
Q Consensus         2 ~~~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~   38 (175)
                      |.|+|++++||.|.  .|+++|...++|.+|+++|.+
T Consensus         2 h~R~HTgeKPy~C~--~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCP--DCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCT--TTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeC--CCCCEecCHHHHHHHHhcCcC
Confidence            67899999999997  899999999999999988864

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.23  E-value=1.2e-12  Score=61.80  Aligned_cols=33  Identities=30%  Similarity=0.777  Sum_probs=19.7

Q ss_pred             eeccCCCcccccCCHHHHHHHHhhhcCCCcccC
Q psy8966          98 YKCPVEYCEKAFSTQYSRKAHIRTHTGEKPYRC  130 (175)
Q Consensus        98 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C  130 (175)
                      |.|+++.|++.|..++.|.+|+++|++++||+|
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C   34 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYIC   34 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSC
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeC
Confidence            455555566666666666666666666666655

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.22  E-value=8.5e-13  Score=58.51  Aligned_cols=28  Identities=46%  Similarity=1.080  Sum_probs=22.1

Q ss_pred             CCcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       125 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      ||||+|  ++|+++|..++.|.+|+++|+|
T Consensus         1 EKPy~C--~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQC--RICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEEC--TTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccC--CCCcCEecccccccccCCCccC
Confidence            577888  7788888888888888888875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=4.2e-12  Score=59.86  Aligned_cols=35  Identities=23%  Similarity=0.454  Sum_probs=31.4

Q ss_pred             ccCCcccchHHHhchhhHHHHHHHhcCCccccCCc
Q psy8966         128 YRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPG  162 (175)
Q Consensus       128 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  162 (175)
                      |.|+.+.|+++|..++.|.+|+++|+|++||.|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            67844569999999999999999999999999974

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.22  E-value=1.4e-12  Score=58.56  Aligned_cols=29  Identities=31%  Similarity=0.824  Sum_probs=23.2

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCCc
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY  156 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  156 (175)
                      +||.|  ++|+++|..++.|.+|+++|+||+
T Consensus         1 kp~~C--~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVC--EVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCC--TTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCC--CCCCCCCCCchHcccccCcccCCC
Confidence            57888  778888888888888888888773

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.21  E-value=4.6e-12  Score=58.41  Aligned_cols=33  Identities=55%  Similarity=0.861  Sum_probs=26.4

Q ss_pred             ccCCCCCccCCCccchhhccChHHHHHHHhhhcCC
Q psy8966           5 IHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE   39 (175)
Q Consensus         5 ~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~   39 (175)
                      +|++++||+|.  .||++|...++|.+|+++|+++
T Consensus         1 IHTgekpy~C~--~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCV--ECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECS--SSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCC--CCCCEeCchHHhHhhccccCCC
Confidence            57888888886  8888888888888888888764

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=2.4e-12  Score=57.64  Aligned_cols=29  Identities=41%  Similarity=0.763  Sum_probs=23.3

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCCc
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY  156 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  156 (175)
                      |||.|  ++|+++|.+++.|.+|+++|+||+
T Consensus         1 Kpy~C--~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFAC--PECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCC--TTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEEC--CcCCCeecchHHhhhhcCccCCcC
Confidence            57888  778888888888888888888763

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.17  E-value=8.1e-12  Score=59.11  Aligned_cols=34  Identities=29%  Similarity=0.682  Sum_probs=28.4

Q ss_pred             cccCCCCCccCCCccchhhccChHHHHHHHhhhcCC
Q psy8966           4 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE   39 (175)
Q Consensus         4 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~   39 (175)
                      |+|+|++||.|.  .||++|...++|..|+++|.++
T Consensus         1 R~HTgekPy~C~--~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACS--HCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECS--SSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECC--CCCCCcCCHhHHHHhCcccCCC
Confidence            578888888887  8888888888888888888764

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.16  E-value=2.9e-12  Score=60.61  Aligned_cols=33  Identities=42%  Similarity=0.901  Sum_probs=25.1

Q ss_pred             hhhcCCCcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         120 RTHTGEKPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       120 ~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      ++|+|++||+|  ++|+++|..+++|.+|++.+++
T Consensus         1 R~HTgekP~~C--~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYEC--YICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEEC--TTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeC--CCCcccccchHHHHHHcccccC
Confidence            36788888888  7788888888888888765443

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.16  E-value=5.6e-13  Score=66.97  Aligned_cols=38  Identities=26%  Similarity=0.652  Sum_probs=22.7

Q ss_pred             HHHHHhhhcCCCcccCCccc--chHHHhchhhHHHHHHHhcCC
Q psy8966         115 RKAHIRTHTGEKPYRCAHEF--CSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       115 l~~H~~~h~~~~~~~C~~~~--C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      |..|+. |.+++||.|  ++  |+++|..+++|..|+++|+||
T Consensus         7 l~~h~~-h~gekpy~C--~~~~C~k~F~~~~~L~~H~r~Htge   46 (47)
T d1ncsa_           7 IDKYVK-EMPDKTFEC--LFPGCTKTFKRRYNIRSHIQTHLED   46 (47)
T ss_dssp             GGGSCE-EETTTEEEC--CCTTCCCEECSSSSHHHHHHHHTTT
T ss_pred             hcchhh-ccCCCCeEC--CcCCCCccccCchHHHhhcccccCC
Confidence            334443 666666666  44  666666666666666666665

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.10  E-value=3.4e-11  Score=54.68  Aligned_cols=31  Identities=48%  Similarity=0.902  Sum_probs=18.6

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      +||.|+++.|++.|...++|.+|+++|+|++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            3566655566666666666666666666553

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=1e-11  Score=56.43  Aligned_cols=31  Identities=45%  Similarity=0.991  Sum_probs=28.2

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCCc
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKY  156 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  156 (175)
                      +||+|+.+.|+++|..+++|.+|+++|+||+
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            6899966679999999999999999999984

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.09  E-value=9.8e-12  Score=56.02  Aligned_cols=28  Identities=43%  Similarity=0.987  Sum_probs=15.2

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                      ||.|+++.|++.|...++|..|+++|+|
T Consensus         2 p~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           2 PFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CccCCCCCCCceECcHHHcCccccccCC
Confidence            5555544555555555555555555554

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.07  E-value=9.9e-12  Score=53.62  Aligned_cols=26  Identities=46%  Similarity=0.907  Sum_probs=18.9

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhc
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      |||+|  ++||++|..++.|.+|+++|+
T Consensus         1 KPy~C--~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKC--LECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEEC--SSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccC--CCCcCeeccCcccccCccCCC
Confidence            57777  667777777777777777764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.06  E-value=1.9e-11  Score=54.97  Aligned_cols=30  Identities=43%  Similarity=0.873  Sum_probs=15.5

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      |||+|+.+.|+++|..++.|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            355552222555555555555555555554

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.05  E-value=5.8e-11  Score=55.98  Aligned_cols=32  Identities=38%  Similarity=0.721  Sum_probs=25.3

Q ss_pred             cccCCCCCccCCCccchhhccChHHHHHHHhhhc
Q psy8966           4 RIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHT   37 (175)
Q Consensus         4 ~~~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~   37 (175)
                      |+|+|++||.|.  .|++.|...++|.+|+..++
T Consensus         1 R~HTgekP~~C~--~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECY--ICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECT--TTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCC--CCcccccchHHHHHHccccc
Confidence            578888888887  88888888888888876543

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=8.3e-11  Score=52.91  Aligned_cols=30  Identities=47%  Similarity=0.896  Sum_probs=27.0

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      |||+|+.+.|+++|..+++|.+|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            689994445999999999999999999996

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.04  E-value=8.8e-11  Score=54.77  Aligned_cols=32  Identities=38%  Similarity=0.743  Sum_probs=25.0

Q ss_pred             cCCCCCccCCCccchhhccChHHHHHHHhhhcCC
Q psy8966           6 HSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE   39 (175)
Q Consensus         6 ~~~~~~~~C~~~~C~~~f~~~~~L~~h~~~~~~~   39 (175)
                      |+|++||.|.  .|++.|...++|.+|+++|++.
T Consensus         2 ~TGekPy~C~--~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCR--ICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECS--SSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCC--CCCCcccChHHHHHHccccCCc
Confidence            6778888886  7888888888888888777654

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.02  E-value=5.5e-11  Score=59.55  Aligned_cols=38  Identities=24%  Similarity=0.544  Sum_probs=34.4

Q ss_pred             hhhhccCCcceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          88 HLRIHSGIRPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        88 ~~~~~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      |+ .+.+++||.|.++.|++.|...++|..|+++|+|++
T Consensus        10 h~-~h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_          10 YV-KEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SC-EEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hh-hccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            44 489999999987779999999999999999999985

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=1.2e-10  Score=52.25  Aligned_cols=30  Identities=47%  Similarity=0.864  Sum_probs=28.1

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGE  125 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  125 (175)
                      +||.|+++.|++.|...++|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            589999888999999999999999999986

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=98.97  E-value=2.1e-10  Score=51.22  Aligned_cols=29  Identities=45%  Similarity=0.807  Sum_probs=27.2

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      +||.|+  .|++.|...+.|.+|+++|+|++
T Consensus         1 kp~~C~--~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCE--VCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCT--TTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCC--CCCCCCCCchHcccccCcccCCC
Confidence            589997  89999999999999999999986

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=2.5e-10  Score=50.86  Aligned_cols=29  Identities=34%  Similarity=0.723  Sum_probs=27.1

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      +||.|+  .|++.|..+++|.+|+++|++++
T Consensus         1 Kpy~C~--~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACP--ECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCT--TTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECC--cCCCeecchHHhhhhcCccCCcC
Confidence            589997  89999999999999999999985

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.94  E-value=2.9e-10  Score=50.14  Aligned_cols=28  Identities=43%  Similarity=0.878  Sum_probs=26.3

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                      ++||.|+  .|++.|..+++|..|+++|+|
T Consensus         1 EKPy~C~--~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCR--ICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECT--TTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCC--CCcCEecccccccccCCCccC
Confidence            5899997  899999999999999999986

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.91  E-value=2e-10  Score=52.28  Aligned_cols=29  Identities=38%  Similarity=0.844  Sum_probs=14.3

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      +||.|+.+.|+++|...++|.+|+++|+.
T Consensus         2 rP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             cCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            45555222355555555555555555543

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.90  E-value=9.6e-11  Score=52.12  Aligned_cols=29  Identities=55%  Similarity=1.081  Sum_probs=17.9

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                      +||.|+++.|++.|...++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            35666655666666666666666666654

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.88  E-value=5.8e-10  Score=49.52  Aligned_cols=29  Identities=48%  Similarity=1.055  Sum_probs=26.4

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      |||+|+.+.|+++|..+++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            68999656699999999999999999987

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=3.5e-10  Score=49.69  Aligned_cols=26  Identities=46%  Similarity=0.929  Sum_probs=13.8

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhhh
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRTH  122 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~h  122 (175)
                      ||.|+++.|++.|...++|.+|+++|
T Consensus         2 Pf~C~~~gC~K~F~~~~~L~~H~r~H   27 (28)
T d1ubdc4           2 PYVCPFDGCNKKFAQSTNLKSHILTH   27 (28)
T ss_dssp             CCCCCSTTCCCCCSSTTTTHHHHHHH
T ss_pred             CcCCCCCCcCCcCCCHHHHHHHHhhc
Confidence            45555555555555555555555554

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.80  E-value=2.1e-09  Score=48.83  Aligned_cols=30  Identities=33%  Similarity=0.597  Sum_probs=27.9

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                      ++||.|+++.|++.|...++|.+|+++|+.
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            579999988999999999999999999975

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=2e-09  Score=46.20  Aligned_cols=26  Identities=50%  Similarity=0.828  Sum_probs=24.3

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhc
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHT  123 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  123 (175)
                      +||+|.  +||+.|...+.|.+|+++|+
T Consensus         1 KPy~C~--eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCL--ECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECS--SSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCC--CCcCeeccCcccccCccCCC
Confidence            589996  99999999999999999985

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.78  E-value=1e-09  Score=48.16  Aligned_cols=28  Identities=39%  Similarity=0.863  Sum_probs=25.5

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhc
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      +||.|+.+.|+++|...++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            6899966669999999999999999996

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.47  E-value=1.3e-08  Score=41.58  Aligned_cols=26  Identities=46%  Similarity=1.007  Sum_probs=19.8

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      |.+|  ++|++.|..+..|..||+.|+|
T Consensus         1 phkc--~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKC--EVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCB--TTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCcc--chhhhHhcchhHHHHHhhccCC
Confidence            4567  7788888888888888888775

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.34  E-value=5e-08  Score=40.79  Aligned_cols=29  Identities=38%  Similarity=0.949  Sum_probs=21.6

Q ss_pred             CCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       125 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      ++||+|  ..|.+....++.|..|++.|+|+
T Consensus         1 erpfkc--qlcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKC--QICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEEC--SSSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCccee--eecccccCCchheEEeeecccCc
Confidence            467777  77777777777777777777763

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.31  E-value=7e-08  Score=40.68  Aligned_cols=27  Identities=33%  Similarity=0.925  Sum_probs=21.3

Q ss_pred             CCcccCCcccchHHHhchhhHHHHHHHhc
Q psy8966         125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus       125 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      ++||.|  .+||+.|..+....+|.++|.
T Consensus         1 EkPf~C--~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFAC--DICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEEC--TTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCccc--chhhhhhhcchhhhhhhhhcc
Confidence            578888  778888888888888888774

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.25  E-value=1.3e-07  Score=40.38  Aligned_cols=29  Identities=45%  Similarity=0.940  Sum_probs=22.8

Q ss_pred             CCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       125 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      ++||.|  ++|+..|+.+.-+.-|.++|.|.
T Consensus         1 ekp~~c--pic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSC--PVCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEE--TTTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCccc--chHHHHhhccccceEeeecccCc
Confidence            478888  77888888888888888888764

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.18  E-value=1.7e-07  Score=41.04  Aligned_cols=25  Identities=44%  Similarity=0.837  Sum_probs=14.0

Q ss_pred             CcccccCCHHHHHHHHhhhcCCCcc
Q psy8966         104 YCEKAFSTQYSRKAHIRTHTGEKPY  128 (175)
Q Consensus       104 ~C~~~f~~~~~l~~H~~~h~~~~~~  128 (175)
                      .||+.|.+...|.+|.-+|++++||
T Consensus        10 ~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1          10 ICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             TTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             HHHHHHHHHHHHHhhhcccCCCCCC
Confidence            5555555555555555555555554

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.15  E-value=1.4e-06  Score=36.46  Aligned_cols=27  Identities=41%  Similarity=0.891  Sum_probs=19.5

Q ss_pred             CCeeccccccCcccCChHHHHHHHHHh
Q psy8966          40 KPYRCAHEFCSKSFKTSGDLQKHVRTH   66 (175)
Q Consensus        40 ~~~~C~~~~C~~~f~~~~~l~~H~~~h   66 (175)
                      .||+|+.++|++.|...+.|.+|-++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            467777777777777777777776665

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=2.2e-07  Score=38.60  Aligned_cols=25  Identities=40%  Similarity=0.759  Sum_probs=16.5

Q ss_pred             cCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         129 RCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       129 ~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      .|  .+||++|.-++.|.+|+-+|+||
T Consensus         4 vc--~ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           4 VC--AECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EC--TTTCCEESSHHHHHHHGGGTSCC
T ss_pred             hH--HHHhHHHHHHHHHHHHhhcccCC
Confidence            46  56666666666666666666664

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.08  E-value=2e-06  Score=36.65  Aligned_cols=28  Identities=29%  Similarity=0.683  Sum_probs=17.7

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhc
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHT  123 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  123 (175)
                      +||.|..+.|++.+...++|..|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            3566666666666666666666666543

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.06  E-value=1.5e-06  Score=37.12  Aligned_cols=27  Identities=30%  Similarity=0.712  Sum_probs=14.3

Q ss_pred             CCccCCCccchhhccChHHHHHHHhhh
Q psy8966          10 RPYKCPVEYCEKAFSTQYSRKAHIRTH   36 (175)
Q Consensus        10 ~~~~C~~~~C~~~f~~~~~L~~h~~~~   36 (175)
                      +||.|....|++++...++|++|++.+
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~   27 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTV   27 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHS
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhh
Confidence            355555445555555555555555543

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=98.00  E-value=3.2e-06  Score=35.33  Aligned_cols=27  Identities=44%  Similarity=0.813  Sum_probs=21.1

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhh
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTH  122 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h  122 (175)
                      .||.|+...|++.|...+-|++|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            377888778888888888888887766

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=3e-06  Score=36.98  Aligned_cols=32  Identities=31%  Similarity=0.606  Sum_probs=29.1

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcCCcccc
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAE  159 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~  159 (175)
                      +...|  +.||+.|.....|.+|.-+|++|+||.
T Consensus         4 k~~~c--e~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVAC--EICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEE--TTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhH--HHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            44679  899999999999999999999999984

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.90  E-value=2.3e-06  Score=35.79  Aligned_cols=29  Identities=31%  Similarity=0.801  Sum_probs=25.0

Q ss_pred             CCcccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       125 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +..|.|  ..|...|+.+-.|+.||.+|+||
T Consensus         2 eqvftc--s~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTC--SVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEEC--SSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEe--HHHHHHHHHHHhheeeeecccCC
Confidence            466889  88999999999999999999885

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.82  E-value=1e-05  Score=33.96  Aligned_cols=27  Identities=30%  Similarity=0.746  Sum_probs=24.6

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhc
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHT  123 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~  123 (175)
                      ++||.|.  .||+.|..+....+|.++|.
T Consensus         1 EkPf~C~--~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACD--ICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECT--TTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccc--hhhhhhhcchhhhhhhhhcc
Confidence            5799996  89999999999999999884

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.81  E-value=8e-06  Score=33.10  Aligned_cols=26  Identities=50%  Similarity=0.898  Sum_probs=23.0

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                      |.+|+  .|++.|+.+..|..|++.|+|
T Consensus         1 phkc~--~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCE--VCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBT--TTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccc--hhhhHhcchhHHHHHhhccCC
Confidence            45786  899999999999999999975

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.79  E-value=9.6e-06  Score=34.51  Aligned_cols=29  Identities=34%  Similarity=0.818  Sum_probs=26.0

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcCC
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE  125 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  125 (175)
                      ++||.|+  .|+..|..+.-+.-|+++|.|.
T Consensus         1 ekp~~cp--ic~qrfkrkdrmsyhvrshdg~   29 (32)
T d2epqa1           1 EKPYSCP--VCGLRFKRKDRMSYHVRSHDGS   29 (32)
T ss_dssp             CCSSEET--TTTEECSCHHHHHHHHHHHSCC
T ss_pred             CCCcccc--hHHHHhhccccceEeeecccCc
Confidence            5799998  8999999999999999999763

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.76  E-value=1.3e-05  Score=33.32  Aligned_cols=29  Identities=38%  Similarity=0.765  Sum_probs=26.4

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhhcCC
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTHTGE  125 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  125 (175)
                      ++||+|.  .|.+.-...+.|..|.+.|+|+
T Consensus         1 erpfkcq--lcsy~srnssqltvhlr~htgd   29 (29)
T d2dmda3           1 ERPFKCQ--ICPYASRNSSQLTVHLRSHTGD   29 (29)
T ss_dssp             CCCEECS--SSSCEESSHHHHHHHHTTCCSC
T ss_pred             CCcceee--ecccccCCchheEEeeecccCc
Confidence            4799996  8999999999999999999875

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.74  E-value=1.7e-05  Score=33.25  Aligned_cols=28  Identities=43%  Similarity=0.828  Sum_probs=19.3

Q ss_pred             CeeccccccCcccCChHHHHHHHHHhcC
Q psy8966          41 PYRCAHEFCSKSFKTSGDLQKHVRTHTG   68 (175)
Q Consensus        41 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~   68 (175)
                      ||.|..++|.+.|.+--.|.+|..+|++
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            5666666777777777777777666665

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.73  E-value=6.1e-06  Score=35.48  Aligned_cols=29  Identities=48%  Similarity=0.848  Sum_probs=21.5

Q ss_pred             cceeccCCCcccccCCHHHHHHHH-hhhcC
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHI-RTHTG  124 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~  124 (175)
                      +||.|..+.|.+.|...++...|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            477787777888888888877885 66643

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.64  E-value=2.8e-05  Score=32.11  Aligned_cols=26  Identities=42%  Similarity=0.600  Sum_probs=23.1

Q ss_pred             eeccCCCcccccCCHHHHHHHHhhhcCC
Q psy8966          98 YKCPVEYCEKAFSTQYSRKAHIRTHTGE  125 (175)
Q Consensus        98 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~  125 (175)
                      ..|.  +||+.|...+.|++|.-+|+++
T Consensus         3 hvc~--ecgkaf~essklkrh~lvhtge   28 (28)
T d1ubdc2           3 HVCA--ECGKAFVESSKLKRHQLVHTGE   28 (28)
T ss_dssp             EECT--TTCCEESSHHHHHHHGGGTSCC
T ss_pred             chHH--HHhHHHHHHHHHHHHhhcccCC
Confidence            3575  9999999999999999999875

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.55  E-value=3.6e-05  Score=32.20  Aligned_cols=29  Identities=45%  Similarity=0.758  Sum_probs=17.9

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhhhcCC
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRTHTGE  125 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  125 (175)
                      ||-|....|.+.|.+.-.|.+|.-+|+|+
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CcCcccccccccchhhhhhhhhhccccCC
Confidence            55566566666666666666666666553

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.53  E-value=1.7e-05  Score=32.34  Aligned_cols=23  Identities=39%  Similarity=0.585  Sum_probs=12.6

Q ss_pred             ccchHHHhchhhHHHHHHHhcCC
Q psy8966         133 EFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       133 ~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      +.|.+.|.++..|..|-+.|+||
T Consensus         4 p~c~k~f~skyylkvhnr~htge   26 (27)
T d2dlqa4           4 PTCHKKFLSKYYLKVHNRKHTGE   26 (27)
T ss_dssp             TTTCCCCSSHHHHHHHHHHHSSC
T ss_pred             cchHHHHHHhHhhhhccccccCC
Confidence            44555555555555555555554

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.51  E-value=4.1e-05  Score=34.04  Aligned_cols=29  Identities=38%  Similarity=0.747  Sum_probs=21.2

Q ss_pred             ceeccCCCcccc---cCCHHHHHHHHhhhcCC
Q psy8966          97 PYKCPVEYCEKA---FSTQYSRKAHIRTHTGE  125 (175)
Q Consensus        97 ~~~C~~~~C~~~---f~~~~~l~~H~~~h~~~  125 (175)
                      .|.|.|..|.+.   |.....|..|+++|+||
T Consensus         2 ~y~C~W~~C~R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2           2 EFVCHWGGCSRELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             CCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CeEEECCCCCCCCCcchhHHHHHHHHhhcCCC
Confidence            466777777654   77778888888888775

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=5.8e-05  Score=31.05  Aligned_cols=26  Identities=38%  Similarity=0.804  Sum_probs=18.4

Q ss_pred             CCccCCCccchhhccChHHHHHHHhhhc
Q psy8966          10 RPYKCPVEYCEKAFSTQYSRKAHIRTHT   37 (175)
Q Consensus        10 ~~~~C~~~~C~~~f~~~~~L~~h~~~~~   37 (175)
                      +||+|.  .|+......++|.+|++.|.
T Consensus         2 kp~kck--~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCK--TCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECS--SSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccc--cccchhcchhhHhhhhhccc
Confidence            577776  77777777777777777664

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.44  E-value=8.5e-05  Score=33.71  Aligned_cols=28  Identities=21%  Similarity=0.526  Sum_probs=19.7

Q ss_pred             CcceeccCCCcccccCCHHHHHHHHhhh
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHIRTH  122 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h  122 (175)
                      ++||.|..+.|+..|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            5677776667777777777777776665

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.38  E-value=0.00011  Score=30.66  Aligned_cols=27  Identities=37%  Similarity=0.539  Sum_probs=18.9

Q ss_pred             eeccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          98 YKCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        98 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      |.|+  .|+....-.+-|..|+++|++++
T Consensus         2 YvC~--~Cg~~C~KPSvL~KHIRsHT~~R   28 (28)
T d1bboa1           2 YICE--ECGIRAKKPSMLKKHIRTHTDVR   28 (28)
T ss_dssp             CBCT--TTCCBCSSHHHHHHHHHHTSSCC
T ss_pred             cccc--ccCcccCCHHHHHHHHHHhcCCC
Confidence            4564  67777777777777777777653

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=1.6e-05  Score=34.09  Aligned_cols=30  Identities=53%  Similarity=0.957  Sum_probs=25.2

Q ss_pred             CcccCCcccchHHHhchhhHHHHH-HHhcCC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHV-RTHTGK  155 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~-~~h~~~  155 (175)
                      +||.|..+.|.|+|...++-..|+ ++|..|
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~e   31 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSNE   31 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCSC
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccCC
Confidence            689996666999999999999997 788653

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.37  E-value=0.00011  Score=30.22  Aligned_cols=26  Identities=38%  Similarity=0.804  Sum_probs=18.1

Q ss_pred             cceeccCCCcccccCCHHHHHHHHhhhc
Q psy8966          96 RPYKCPVEYCEKAFSTQYSRKAHIRTHT  123 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~  123 (175)
                      +|++|.  .|++.....++|..|.++|.
T Consensus         2 kp~kck--~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCK--TCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECS--SSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccc--cccchhcchhhHhhhhhccc
Confidence            467775  67777777777777777664

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.34  E-value=6.6e-05  Score=34.55  Aligned_cols=24  Identities=42%  Similarity=0.872  Sum_probs=14.5

Q ss_pred             CCCCccCCCccchhhccChHHHHHHH
Q psy8966           8 GIRPYKCPVEYCEKAFSTQYSRKAHI   33 (175)
Q Consensus         8 ~~~~~~C~~~~C~~~f~~~~~L~~h~   33 (175)
                      |.+||+|.  .|++.|....++.+|.
T Consensus         2 GiKPYeC~--~C~KrFMWRDSF~RH~   25 (44)
T d2csha2           2 GIKPYECN--ICAKRFMWRDSFHRHV   25 (44)
T ss_dssp             CCCCEECS--SSCCEESCHHHHHHHH
T ss_pred             CCCceecc--chhhhhhhHHHHHHhh
Confidence            45566665  6666666666666554

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.32  E-value=3.4e-05  Score=35.53  Aligned_cols=25  Identities=40%  Similarity=0.926  Sum_probs=16.3

Q ss_pred             CCCcccCCcccchHHHhchhhHHHHHH
Q psy8966         124 GEKPYRCAHEFCSKSFKTSGDLQKHVR  150 (175)
Q Consensus       124 ~~~~~~C~~~~C~~~f~~~~~l~~H~~  150 (175)
                      |-|||.|  .+|++.|-.+.++.+|..
T Consensus         2 GiKPYeC--~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYEC--NICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEEC--SSSCCEESCHHHHHHHHH
T ss_pred             CCCceec--cchhhhhhhHHHHHHhhh
Confidence            4566666  666666666666666654

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.31  E-value=9.7e-05  Score=33.52  Aligned_cols=28  Identities=21%  Similarity=0.526  Sum_probs=13.3

Q ss_pred             CCCccCCCccchhhccChHHHHHHHhhh
Q psy8966           9 IRPYKCPVEYCEKAFSTQYSRKAHIRTH   36 (175)
Q Consensus         9 ~~~~~C~~~~C~~~f~~~~~L~~h~~~~   36 (175)
                      ++||.|+...|+.+|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            4455554344555555555554444433

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.30  E-value=0.00015  Score=29.46  Aligned_cols=26  Identities=54%  Similarity=0.998  Sum_probs=23.5

Q ss_pred             eccCCCcccccCCHHHHHHHHhhhcCCC
Q psy8966          99 KCPVEYCEKAFSTQYSRKAHIRTHTGEK  126 (175)
Q Consensus        99 ~C~~~~C~~~f~~~~~l~~H~~~h~~~~  126 (175)
                      .|+  .|.+.|.++.-|+.|.+.|+|++
T Consensus         2 qcp--~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECP--TCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCT--TTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCc--chHHHHHHhHhhhhccccccCCC
Confidence            476  89999999999999999999875

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.21  E-value=0.00022  Score=32.51  Aligned_cols=28  Identities=25%  Similarity=0.759  Sum_probs=23.4

Q ss_pred             CCeeccccccCcccCChHHHHHHHHHhcCC
Q psy8966          40 KPYRCAHEFCSKSFKTSGDLQKHVRTHTGK   69 (175)
Q Consensus        40 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~   69 (175)
                      +.|.|..  |++.|.+..+|..||..|..+
T Consensus         4 r~~~C~~--C~k~F~s~qALGGH~~~Hr~~   31 (37)
T d1njqa_           4 RSYTCSF--CKREFRSAQALGGHMNVHRRD   31 (37)
T ss_dssp             SSEECTT--TCCEESSHHHHHHHHHTTCCS
T ss_pred             CccCCCC--CCCccCCcccccchHhhhcch
Confidence            4589955  999999999999999888654

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.19  E-value=7.6e-05  Score=31.14  Aligned_cols=26  Identities=46%  Similarity=0.729  Sum_probs=24.4

Q ss_pred             ccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         128 YRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       128 ~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      |.|  +.|+..-.-.+-|..|.++|+++
T Consensus         2 YvC--~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YIC--EECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBC--TTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccc--cccCcccCCHHHHHHHHHHhcCC
Confidence            789  88999999999999999999987

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.17  E-value=6.6e-05  Score=34.32  Aligned_cols=26  Identities=31%  Similarity=0.856  Sum_probs=12.7

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      .|+|  .+|++.|.+.-+|-.||+.|..
T Consensus         5 ~~~C--~~C~k~F~s~qALGGH~~~Hr~   30 (37)
T d1njqa_           5 SYTC--SFCKREFRSAQALGGHMNVHRR   30 (37)
T ss_dssp             SEEC--TTTCCEESSHHHHHHHHHTTCC
T ss_pred             ccCC--CCCCCccCCcccccchHhhhcc
Confidence            3445  4455555555555555554433

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.09  E-value=5e-05  Score=31.71  Aligned_cols=24  Identities=50%  Similarity=1.179  Sum_probs=17.6

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHh
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h  152 (175)
                      ||.|  ..|..+|.++.+|..||++.
T Consensus         1 py~C--~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHC--TYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEEC--SSSSCEESSHHHHHHHHHSS
T ss_pred             Cccc--ceeeeeEeeccchhHhhhhh
Confidence            5777  66777777777777777753

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.05  E-value=0.00024  Score=28.35  Aligned_cols=18  Identities=39%  Similarity=0.816  Sum_probs=9.6

Q ss_pred             cCcccCChHHHHHHHHHh
Q psy8966          49 CSKSFKTSGDLQKHVRTH   66 (175)
Q Consensus        49 C~~~f~~~~~l~~H~~~h   66 (175)
                      |.++|..+++|.+|+++|
T Consensus         6 cersfveksalsrhqrvh   23 (26)
T d1znfa_           6 CERSFVEKSALSRHQRVH   23 (26)
T ss_dssp             SCCBCSSHHHHHHHGGGT
T ss_pred             hHHHHHHHHHHHHHHHhh
Confidence            555555555555555444

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.04  E-value=0.00022  Score=28.45  Aligned_cols=24  Identities=38%  Similarity=0.814  Sum_probs=21.4

Q ss_pred             ccCCCccchhhccChHHHHHHHhhhc
Q psy8966          12 YKCPVEYCEKAFSTQYSRKAHIRTHT   37 (175)
Q Consensus        12 ~~C~~~~C~~~f~~~~~L~~h~~~~~   37 (175)
                      |+|.  .|..+|..++.|.+|++.|.
T Consensus         1 ykcg--lcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCG--LCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCS--SSCCBCSSHHHHHHHGGGTC
T ss_pred             Cccc--chHHHHHHHHHHHHHHHhhc
Confidence            6787  99999999999999998874

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00017  Score=30.19  Aligned_cols=23  Identities=39%  Similarity=0.782  Sum_probs=11.7

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhh
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRT  121 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~  121 (175)
                      ||.|.  .|.+...++++|+.|+++
T Consensus         2 py~cq--yc~yrsadssnlkthikt   24 (30)
T d1klra_           2 TYQCQ--YCEFRSADSSNLKTHIKT   24 (30)
T ss_dssp             CCCCS--SSSCCCSCSHHHHHHHHH
T ss_pred             Ccccc--ccccccccchhhhhhhhc
Confidence            45553  455555555555555544

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00056  Score=28.44  Aligned_cols=24  Identities=33%  Similarity=0.894  Sum_probs=21.4

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhhh
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRTH  122 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~h  122 (175)
                      ||.|.  .|+..|..+.+|..|+++-
T Consensus         1 py~C~--~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCT--YCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECS--SSSCEESSHHHHHHHHHSS
T ss_pred             Ccccc--eeeeeEeeccchhHhhhhh
Confidence            68897  8999999999999998764

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.76  E-value=0.00065  Score=28.38  Aligned_cols=27  Identities=30%  Similarity=0.757  Sum_probs=24.2

Q ss_pred             CcccCCcccchHHHhchhhHHHHHHHhcC
Q psy8966         126 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG  154 (175)
Q Consensus       126 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~  154 (175)
                      +||.|  ..|.+....+++|..|.++.++
T Consensus         1 kpy~c--qyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQC--QYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCC--SSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccc--cccccccccchhhhhhhhcccc
Confidence            68999  8999999999999999997554

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.61  E-value=0.0003  Score=29.35  Aligned_cols=23  Identities=35%  Similarity=0.950  Sum_probs=11.2

Q ss_pred             cccCCcccchHHHhchhhHHHHHHH
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRT  151 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~  151 (175)
                      ||+|  +.|.....+.++|..|++.
T Consensus         2 PFkC--~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           2 PFKC--NYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             SEEC--SSSSCEESSHHHHHHHHHH
T ss_pred             Cccc--ceecccccCcchHHHHHHH
Confidence            4455  4455444445555555443

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.51  E-value=0.00047  Score=28.36  Aligned_cols=20  Identities=35%  Similarity=0.481  Sum_probs=9.9

Q ss_pred             ccchHHHhchhhHHHHHHHh
Q psy8966         133 EFCSKSFKTSGDLQKHVRTH  152 (175)
Q Consensus       133 ~~C~~~f~~~~~l~~H~~~h  152 (175)
                      ++|.++-.++..|+.|.++|
T Consensus         6 ~ecsyscsskaalrvh~rih   25 (28)
T d1x5wa1           6 SECSYSCSSKAALRIHERIH   25 (28)
T ss_dssp             SSSSCEESSHHHHHHHHGGG
T ss_pred             cccccccCcHHHHHHhhccc
Confidence            44555555555555555544

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.49  E-value=0.00078  Score=26.79  Aligned_cols=21  Identities=33%  Similarity=0.888  Sum_probs=14.9

Q ss_pred             CccCCCccchhhccChHHHHHHH
Q psy8966          11 PYKCPVEYCEKAFSTQYSRKAHI   33 (175)
Q Consensus        11 ~~~C~~~~C~~~f~~~~~L~~h~   33 (175)
                      ||+|+  .|...|.++.+|..|+
T Consensus         2 pykcs--scsqqfmqkkdlqshm   22 (26)
T d2dlqa1           2 PYKCS--SCSQQFMQKKDLQSHM   22 (26)
T ss_dssp             SEECS--SSCCEESSHHHHHHHH
T ss_pred             CCccc--HHHHHHHHHHHHHHHH
Confidence            67776  6777777777777765

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.45  E-value=0.0012  Score=29.19  Aligned_cols=16  Identities=50%  Similarity=0.856  Sum_probs=7.6

Q ss_pred             ccChHHHHHHHhhhcC
Q psy8966          23 FSTQYSRKAHIRTHTG   38 (175)
Q Consensus        23 f~~~~~L~~h~~~~~~   38 (175)
                      |.....|..|++.|++
T Consensus        17 f~a~YkLv~H~R~HTg   32 (33)
T d2glia2          17 FKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             CSSHHHHHHHTHHHHC
T ss_pred             chhHHHHHHHHhhcCC
Confidence            4444444444444443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.42  E-value=0.0031  Score=26.08  Aligned_cols=27  Identities=30%  Similarity=0.786  Sum_probs=17.2

Q ss_pred             CCeeccccccCcccCChHHHHHHHHHhcC
Q psy8966          40 KPYRCAHEFCSKSFKTSGDLQKHVRTHTG   68 (175)
Q Consensus        40 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~~   68 (175)
                      +.|.|..  |...|...-.|..||..|+|
T Consensus         3 qvftcs~--cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           3 QVFTCSV--CQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CCEECSS--SCCEESSHHHHHHHHHHHSS
T ss_pred             ceEEeHH--HHHHHHHHHhheeeeecccC
Confidence            3466644  66666666666666666655

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.41  E-value=0.00034  Score=27.86  Aligned_cols=22  Identities=45%  Similarity=0.964  Sum_probs=15.4

Q ss_pred             cccCCcccchHHHhchhhHHHHHH
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVR  150 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~  150 (175)
                      ||+|  +.|...|-++.+|..||-
T Consensus         2 pykc--sscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKC--SSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEEC--SSSCCEESSHHHHHHHHH
T ss_pred             CCcc--cHHHHHHHHHHHHHHHHH
Confidence            5677  667777777777777763

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.00068  Score=27.95  Aligned_cols=23  Identities=35%  Similarity=0.774  Sum_probs=10.9

Q ss_pred             ccCCCcccccCCHHHHHHHHhhh
Q psy8966         100 CPVEYCEKAFSTQYSRKAHIRTH  122 (175)
Q Consensus       100 C~~~~C~~~f~~~~~l~~H~~~h  122 (175)
                      |+...|++.|.+.+.+..|+.+|
T Consensus         4 CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           4 CPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             CCSTTCCCEESSHHHHHHHHGGG
T ss_pred             CCcccHHHHhhchHHHHHHhhcc
Confidence            33344555555555554444444

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.24  E-value=0.0023  Score=26.31  Aligned_cols=24  Identities=38%  Similarity=0.876  Sum_probs=17.0

Q ss_pred             eccccccCcccCChHHHHHHHHHh
Q psy8966          43 RCAHEFCSKSFKTSGDLQKHVRTH   66 (175)
Q Consensus        43 ~C~~~~C~~~f~~~~~l~~H~~~h   66 (175)
                      .|+..+|++.|...+++..|+.+|
T Consensus         3 ~CphkgC~K~Frd~saMRKHlhtH   26 (28)
T d1ubdc1           3 ACPHKGCTKMFRDNSAMRKHLHTH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHGGG
T ss_pred             cCCcccHHHHhhchHHHHHHhhcc
Confidence            455566777777777777777665

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.16  E-value=0.0039  Score=25.54  Aligned_cols=26  Identities=31%  Similarity=0.549  Sum_probs=22.8

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhhhcC
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRTHTG  124 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~  124 (175)
                      |.+|+  +|.++..++..|..|.++|..
T Consensus         2 pekc~--ecsyscsskaalrvh~rihc~   27 (28)
T d1x5wa1           2 PEKCS--ECSYSCSSKAALRIHERIHCT   27 (28)
T ss_dssp             SEECS--SSSCEESSHHHHHHHHGGGCC
T ss_pred             CccCc--ccccccCcHHHHHHhhccccC
Confidence            56786  999999999999999999853

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=95.94  E-value=0.0008  Score=28.71  Aligned_cols=26  Identities=35%  Similarity=0.924  Sum_probs=16.2

Q ss_pred             cccCCcccchHHHhchhhHHHHHH-HhcC
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVR-THTG  154 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~-~h~~  154 (175)
                      ||.|  .+|+..|..+.-|.+|.. .|.|
T Consensus         1 Pf~C--~~C~R~FaRrDLlLRH~qKlH~g   27 (31)
T d2adra2           1 PYPC--GLCNRAFTRRDLLIRHAQKIHSG   27 (31)
T ss_dssp             SEEC--TTTCCEESSHHHHHHHHTTTSCC
T ss_pred             Cccc--ccccchhhHHHHHHHHHHHHhcC
Confidence            5666  667776766666666664 3444

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.76  E-value=0.0069  Score=25.12  Aligned_cols=26  Identities=31%  Similarity=0.761  Sum_probs=18.3

Q ss_pred             CCeeccccccCcccCChHHHHHHHHHhc
Q psy8966          40 KPYRCAHEFCSKSFKTSGDLQKHVRTHT   67 (175)
Q Consensus        40 ~~~~C~~~~C~~~f~~~~~l~~H~~~h~   67 (175)
                      +||+|..  |..-....++|..|++.-+
T Consensus         1 rPFkC~~--CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNY--CSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSS--SSCEESSHHHHHHHHHHHH
T ss_pred             CCcccce--ecccccCcchHHHHHHHHc
Confidence            3677855  8877777888887776543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.60  E-value=0.0025  Score=26.92  Aligned_cols=29  Identities=31%  Similarity=0.676  Sum_probs=20.2

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      .|.|.-+.|+-.|.-.+.|..|+-.|+||
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTGe   31 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTGE   31 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHCC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcCC
Confidence            45564456777777777777777777765

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.55  E-value=0.0042  Score=25.22  Aligned_cols=22  Identities=27%  Similarity=0.689  Sum_probs=16.3

Q ss_pred             CccCCCccchhhccChHHHHHHHh
Q psy8966          11 PYKCPVEYCEKAFSTQYSRKAHIR   34 (175)
Q Consensus        11 ~~~C~~~~C~~~f~~~~~L~~h~~   34 (175)
                      ||+|.  .||+.+..+.+|..|..
T Consensus         1 pf~c~--kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECP--KCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCT--TTCCBCSSHHHHHHHHH
T ss_pred             CCccc--cchhhhhhHhHHHHHHH
Confidence            56776  78888777787777754

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=95.49  E-value=0.0017  Score=26.42  Aligned_cols=23  Identities=26%  Similarity=0.667  Sum_probs=17.4

Q ss_pred             cccCCcccchHHHhchhhHHHHHHH
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRT  151 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~  151 (175)
                      ||.|  ..||+.|-.+.+|..|...
T Consensus         1 pf~c--~kcgkcyfrkenllehear   23 (28)
T d2dlqa2           1 PFEC--PKCGKCYFRKENLLEHEAR   23 (28)
T ss_dssp             SCBC--TTTCCBCSSHHHHHHHHHH
T ss_pred             CCcc--ccchhhhhhHhHHHHHHHH
Confidence            6788  7788888888888777643

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.96  E-value=0.0047  Score=26.86  Aligned_cols=27  Identities=22%  Similarity=0.647  Sum_probs=19.4

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhcCC
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHTGK  155 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~~~  155 (175)
                      .|.|  .+|++.|..+..+.+|-...+|.
T Consensus         4 afvc--skcgktftrrntm~rha~nc~g~   30 (37)
T d1x6ha1           4 AFVC--SKCGKTFTRRNTMARHADNCAGP   30 (37)
T ss_dssp             CEEC--SSSCCEESCHHHHHHHHHHCCCC
T ss_pred             eeee--cccccchhcchHHHHHhhhcCCC
Confidence            4777  77888887777777777666554

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.70  E-value=0.0044  Score=24.64  Aligned_cols=22  Identities=36%  Similarity=0.911  Sum_probs=17.6

Q ss_pred             ccCCcccchHHHhchhhHHHHHHH
Q psy8966         128 YRCAHEFCSKSFKTSGDLQKHVRT  151 (175)
Q Consensus       128 ~~C~~~~C~~~f~~~~~l~~H~~~  151 (175)
                      |.|  +.|-+-|..+.++..|.++
T Consensus         2 ypc--p~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPC--PFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EEC--TTTCCEESCHHHHHHHHHH
T ss_pred             cCC--chhhHHhccccCceEEEEE
Confidence            678  7788888888888888774

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.70  E-value=0.023  Score=23.37  Aligned_cols=24  Identities=21%  Similarity=0.452  Sum_probs=19.1

Q ss_pred             eccccccCcccCChHHHHHHHHHh
Q psy8966          43 RCAHEFCSKSFKTSGDLQKHVRTH   66 (175)
Q Consensus        43 ~C~~~~C~~~f~~~~~l~~H~~~h   66 (175)
                      .|..++|++.|++..-|+-|.+..
T Consensus         2 ~cdf~gc~kifsnrqylnhh~kyq   25 (30)
T d2dlka1           2 PCDFPGCGRIFSNRQYLNHHKKYQ   25 (30)
T ss_dssp             ECSSTTTCCEESSHHHHHHHHHHG
T ss_pred             CCCCCCchhhhccHHHHHhHHHHH
Confidence            355578999999999999887754

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=94.36  E-value=0.014  Score=24.71  Aligned_cols=22  Identities=32%  Similarity=0.741  Sum_probs=10.7

Q ss_pred             CccCCCccchhhccChHHHHHHHh
Q psy8966          11 PYKCPVEYCEKAFSTQYSRKAHIR   34 (175)
Q Consensus        11 ~~~C~~~~C~~~f~~~~~L~~h~~   34 (175)
                      ||.|.  .|++.|..+.-|.+|+.
T Consensus         1 Pf~C~--~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCG--LCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECT--TTCCEESSHHHHHHHHT
T ss_pred             Ccccc--cccchhhHHHHHHHHHH
Confidence            34444  45555555555555543

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.26  E-value=0.022  Score=23.92  Aligned_cols=28  Identities=32%  Similarity=0.752  Sum_probs=14.6

Q ss_pred             CccCCCccchhhccChHHHHHHHhhhcC
Q psy8966          11 PYKCPVEYCEKAFSTQYSRKAHIRTHTG   38 (175)
Q Consensus        11 ~~~C~~~~C~~~f~~~~~L~~h~~~~~~   38 (175)
                      .|.|+-..|+..|.....|..|+..|+|
T Consensus         3 ~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           3 RYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             ceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            3444434555555555555555555544

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.82  E-value=0.019  Score=23.29  Aligned_cols=22  Identities=23%  Similarity=0.748  Sum_probs=16.5

Q ss_pred             ccCCCccchhhccChHHHHHHHhh
Q psy8966          12 YKCPVEYCEKAFSTQYSRKAHIRT   35 (175)
Q Consensus        12 ~~C~~~~C~~~f~~~~~L~~h~~~   35 (175)
                      |.|+  .|+.....+++|+.|++.
T Consensus         3 ~qcp--hc~tiiarksdlrvhlrn   24 (28)
T d2ct1a1           3 FHCP--HCDTVIARKSDLGVHLRK   24 (28)
T ss_dssp             EECS--SSSCEESSHHHHHHHHHH
T ss_pred             ccCC--cchhheeehhhhhHHhhh
Confidence            5676  788877888888887763

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=93.46  E-value=0.082  Score=21.71  Aligned_cols=25  Identities=24%  Similarity=0.583  Sum_probs=19.0

Q ss_pred             ceeccCCCcccccCCHHHHHHHHhh
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIRT  121 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~~  121 (175)
                      .|.|..+.|+..|..+.+++.|-..
T Consensus         2 nf~cdsd~cdl~fttkanmkkhfnr   26 (31)
T d1tf3a3           2 NFTCDSDGCDLRFTTKANMKKHFNR   26 (31)
T ss_dssp             CEECSSSSCCCEESSHHHHHHHHHH
T ss_pred             CccccCCCcceEEeehHHHHHHHhh
Confidence            4677777888888888888887543

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.38  E-value=0.027  Score=26.61  Aligned_cols=24  Identities=25%  Similarity=0.506  Sum_probs=14.5

Q ss_pred             CccCCCccchhhccChHHHHHHHhhh
Q psy8966          11 PYKCPVEYCEKAFSTQYSRKAHIRTH   36 (175)
Q Consensus        11 ~~~C~~~~C~~~f~~~~~L~~h~~~~   36 (175)
                      .|.|.  .||+.|.....|+.|...|
T Consensus         6 l~pCG--~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCG--LCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCT--TTCCCCSCHHHHHHHHHHH
T ss_pred             eeecc--ccccccCCHHHHhHhHHhc
Confidence            35565  6666666666666665444

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=93.21  E-value=0.014  Score=27.60  Aligned_cols=25  Identities=28%  Similarity=0.627  Sum_probs=20.2

Q ss_pred             cccCCcccchHHHhchhhHHHHHHHhc
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRTHT  153 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~h~  153 (175)
                      .|.|  ..|+|.|.....|+.|...|.
T Consensus         6 l~pC--G~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           6 ILPC--GLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCC--TTTCCCCSCHHHHHHHHHHHT
T ss_pred             eeec--cccccccCCHHHHhHhHHhcC
Confidence            4778  778888888888888888774

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=92.96  E-value=0.035  Score=22.31  Aligned_cols=24  Identities=38%  Similarity=0.612  Sum_probs=15.0

Q ss_pred             cCCCccchhhccChHHHHHHHhhh
Q psy8966          13 KCPVEYCEKAFSTQYSRKAHIRTH   36 (175)
Q Consensus        13 ~C~~~~C~~~f~~~~~L~~h~~~~   36 (175)
                      .|--+.||+.|.....|+.|+-+|
T Consensus         3 vchfe~c~kafkkhnqlkvhqf~h   26 (28)
T d2j7ja1           3 VCHFENCGKAFKKHNQLKVHQFSH   26 (28)
T ss_dssp             ECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             EEEecCchHHHhhccceEEEeecc
Confidence            343346777777777777776555

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.61  E-value=0.011  Score=26.91  Aligned_cols=26  Identities=19%  Similarity=0.312  Sum_probs=18.5

Q ss_pred             CCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchh
Q psy8966         125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSIL  165 (175)
Q Consensus       125 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~  165 (175)
                      .+.|.|  .+||+.+             .|+.|-.||+||.
T Consensus         3 ~~~~~C--~vCG~i~-------------~g~~P~~CPvCg~   28 (37)
T d1nnqa2           3 KKVYIC--PICGYTA-------------VDEAPEYCPVCGA   28 (37)
T ss_dssp             SCEEEC--TTTCCEE-------------ESCCCSBCTTTCC
T ss_pred             CcEEEC--CCCCCEe-------------cCCCCCcCCCCCC
Confidence            356888  7788643             4667788888874

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=91.88  E-value=0.017  Score=26.09  Aligned_cols=26  Identities=23%  Similarity=0.383  Sum_probs=19.0

Q ss_pred             CCcccCCcccchHHHhchhhHHHHHHHhcCCccccCCcchh
Q psy8966         125 EKPYRCAHEFCSKSFKTSGDLQKHVRTHTGKYTAEVPGSIL  165 (175)
Q Consensus       125 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~c~~  165 (175)
                      ++-|.|  .+||+.             +.|+.|-.||+||.
T Consensus         3 ~~~~vC--~vCGyi-------------~~g~~Pe~CPvCg~   28 (36)
T d1yuza2           3 DKFHLC--PICGYI-------------HKGEDFEKCPICFR   28 (36)
T ss_dssp             CCEEEC--SSSCCE-------------EESSCCSBCTTTCC
T ss_pred             CCEEEC--CCCCCE-------------eeCCCCCcCCCCCC
Confidence            466888  789863             34667888999974

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=91.70  E-value=0.063  Score=22.95  Aligned_cols=22  Identities=32%  Similarity=0.529  Sum_probs=18.3

Q ss_pred             ceeccCCCcccccCCHHHHHHHHh
Q psy8966          97 PYKCPVEYCEKAFSTQYSRKAHIR  120 (175)
Q Consensus        97 ~~~C~~~~C~~~f~~~~~l~~H~~  120 (175)
                      .|.|+  .||-.|.+.+.|..|+.
T Consensus         8 rf~c~--pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCL--PCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCT--TTCCBCSCHHHHHHHTT
T ss_pred             ceecc--ccceeecChhHHHhhhh
Confidence            46776  89999999999998854

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.91  E-value=0.13  Score=24.11  Aligned_cols=23  Identities=22%  Similarity=0.625  Sum_probs=12.2

Q ss_pred             CCccCCCccchhhccChHHHHHHHh
Q psy8966          10 RPYKCPVEYCEKAFSTQYSRKAHIR   34 (175)
Q Consensus        10 ~~~~C~~~~C~~~f~~~~~L~~h~~   34 (175)
                      .|-.|+  .|+.+..+..+|++|+.
T Consensus        23 qpatcp--ic~avirqsrnlrrhle   45 (54)
T d1yuja_          23 QPATCP--ICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             CCEECT--TTCCEESSHHHHHHHHH
T ss_pred             CCCCCc--hHHHHHHHHHHHHHHHH
Confidence            344454  55555555555555554

>d2glia1 g.37.1.1 (A:103-134) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.98  E-value=0.19  Score=21.40  Aligned_cols=23  Identities=26%  Similarity=0.533  Sum_probs=19.9

Q ss_pred             eccCCCcccccCCHHHHHHHHhh
Q psy8966          99 KCPVEYCEKAFSTQYSRKAHIRT  121 (175)
Q Consensus        99 ~C~~~~C~~~f~~~~~l~~H~~~  121 (175)
                      .|-|..|+..|.++..|..|+..
T Consensus         3 nChW~~C~~eFdtQd~LV~Hinn   25 (32)
T d2glia1           3 DCRWDGCSQEFDSQEQLVHHINS   25 (32)
T ss_dssp             BCCBTTCCCBCSCHHHHHHHHHH
T ss_pred             cccccccccccCCHHHHHHHccc
Confidence            36678999999999999999864

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.64  E-value=0.3  Score=19.98  Aligned_cols=23  Identities=22%  Similarity=0.515  Sum_probs=16.6

Q ss_pred             eeccCCCcccccCCHHHHHHHHhhh
Q psy8966          98 YKCPVEYCEKAFSTQYSRKAHIRTH  122 (175)
Q Consensus        98 ~~C~~~~C~~~f~~~~~l~~H~~~h  122 (175)
                      |.|.  .|++...+..+++-|+...
T Consensus         3 ftc~--hcgkqlks~~gmkyhvmad   25 (30)
T d2ctda2           3 FTCH--HCGKQLRSLAGMKYHVMAN   25 (30)
T ss_dssp             CCCS--SSCCCCSSHHHHHHHHHHH
T ss_pred             eech--hHHHHHhhccCceEEEeec
Confidence            5665  7888888888888876443

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=89.61  E-value=0.057  Score=28.01  Aligned_cols=26  Identities=27%  Similarity=0.482  Sum_probs=21.2

Q ss_pred             CCcceeccCCCcccccCCHHHHHHHHhh
Q psy8966          94 GIRPYKCPVEYCEKAFSTQYSRKAHIRT  121 (175)
Q Consensus        94 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~  121 (175)
                      |.+.|.|.  .|++.|.+...|..|.++
T Consensus        12 G~gqfYCv--~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          12 GGGLHRCL--ACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             GGGCSEET--TTTEECSSHHHHHHHTTC
T ss_pred             CCCEEecc--cccCccCCHHHHHHHHcc
Confidence            35668897  899999999999999643

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=89.10  E-value=0.1  Score=24.44  Aligned_cols=24  Identities=29%  Similarity=0.750  Sum_probs=11.4

Q ss_pred             CCcccCCcccchHHHhchhhHHHHHH
Q psy8966         125 EKPYRCAHEFCSKSFKTSGDLQKHVR  150 (175)
Q Consensus       125 ~~~~~C~~~~C~~~f~~~~~l~~H~~  150 (175)
                      +.|-.|  ++|+-...++.+|++|+.
T Consensus        22 ~qpatc--pic~avirqsrnlrrhle   45 (54)
T d1yuja_          22 EQPATC--PICYAVIRQSRNLRRHLE   45 (54)
T ss_dssp             SCCEEC--TTTCCEESSHHHHHHHHH
T ss_pred             cCCCCC--chHHHHHHHHHHHHHHHH
Confidence            344444  444444444444444444

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=87.20  E-value=0.036  Score=28.80  Aligned_cols=23  Identities=35%  Similarity=0.668  Sum_probs=20.9

Q ss_pred             cccCCcccchHHHhchhhHHHHHHH
Q psy8966         127 PYRCAHEFCSKSFKTSGDLQKHVRT  151 (175)
Q Consensus       127 ~~~C~~~~C~~~f~~~~~l~~H~~~  151 (175)
                      .|.|  ..|++.|.+...|..|+++
T Consensus        15 qfYC--v~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRC--LACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEE--TTTTEECSSHHHHHHHTTC
T ss_pred             EEec--ccccCccCCHHHHHHHHcc
Confidence            4899  8899999999999999974

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=87.14  E-value=0.11  Score=22.46  Aligned_cols=23  Identities=17%  Similarity=0.506  Sum_probs=12.0

Q ss_pred             CcceeccCCCcccccCCHHHHHHHH
Q psy8966          95 IRPYKCPVEYCEKAFSTQYSRKAHI  119 (175)
Q Consensus        95 ~~~~~C~~~~C~~~f~~~~~l~~H~  119 (175)
                      +..|.|.  .|.+.+...+++-+|.
T Consensus         6 ~~~yRC~--~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           6 EHTYRCK--VCSRVYTHISNFCRHY   28 (37)
T ss_dssp             TTEEECT--TTCCEESSHHHHHHHH
T ss_pred             CcEEEee--hhhHHHHHHHHHHHHH
Confidence            3345554  4555555555555553

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=86.67  E-value=0.098  Score=26.59  Aligned_cols=14  Identities=36%  Similarity=1.118  Sum_probs=6.7

Q ss_pred             cceeccCCCcccccCC
Q psy8966          96 RPYKCPVEYCEKAFST  111 (175)
Q Consensus        96 ~~~~C~~~~C~~~f~~  111 (175)
                      ..|.||  .|++.|..
T Consensus        13 ~~y~Cp--~C~~~ys~   26 (62)
T d1vd4a_          13 ASFKCP--VCSSTFTD   26 (62)
T ss_dssp             SEEECS--SSCCEEEH
T ss_pred             CceECC--CCCCCcch
Confidence            345554  45555533

>d1wjpa2 g.37.1.1 (A:43-66) Zinc finger protein 295, ZNF295 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 295, ZNF295
species: Human (Homo sapiens) [TaxId: 9606]

Probab=82.33  E-value=0.1  Score=20.63  Aligned_cols=14  Identities=21%  Similarity=0.190  Sum_probs=11.1

Q ss_pred             cCCcchhhhccccc
Q psy8966         159 EVPGSILDCLSGRF  172 (175)
Q Consensus       159 ~C~~c~~~~~~~~~  172 (175)
                      .||+|...|.|..+
T Consensus         2 vcpycslrf~sp~l   15 (26)
T d1wjpa2           2 VCPYCSLRFFSPEL   15 (26)
T ss_dssp             CCTTTCCCBSSHHH
T ss_pred             CCCcceeeeCCHHH
Confidence            68999988888654