Psyllid ID: psy903

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------190-------200-------210-------220-------230-------240-------250-------260-------270-------280-------290-------300-------310-------320-------330-------340-------350-------360-------370-------380-------390-------400-------410-------420-------430-------440-------450-------460-------470-------480-------490-------500-------510-------520-------530-------540-------550-------560-------570-------580-------590-------600-------610-------620-------630-------640-------650-------660-------670-------680-------690-------700-------710-------720-------730-------74
Protein Sequence
SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANLRNRT
Secondary Structure (PSIPRED)
cHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccccHHccccccccHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccccHHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHcccHHHHHHHHHcccccccccccccHHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHcccHHHHHHHHHccccccccccccccccHHHHHHHccccccccccccccccHHHHHHHcccHHHHHHHHHccccccccc
Secondary Structure Prediction (SSPRO)
cHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccHHHHHHHccHHHHHHHHHHccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHHHHccHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHcccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccccccHHHHHHHcccHHHHHHHHHccccccHHHHHHccccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHcccccccccHHHHHHHHccHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccccccccHHcccHHHHHHHHHcccccccccccccccHHHHHHHHHHccccccccccccccHHHHHHHcccHHHHHHHHHccccccccc
Coil and Loop (DISEMBL)
slvqacsdgdVKTVKKLLTEgrsvhettdeGESLLSLACSAGYYELAQVLLAMHANvedrgikgectplmeaassgfgklatgdgkladpeVLRRLTSSVSCALDEAAAALTRMrnenprpqnerslvqacsdgdVKTVKKLLTEgrsvhettdeGESLLSLACSAGYYELAQVLLAMHANvedrgikgectplmeaaSSGFIEIVRLLINhgadvngqsssgntplMYACAGGHEAVVRVLLECganvedhnenghtplmeaasAGHVGVAKILLEYgaginthsneFKESALTLACYKGHLDMVRFLLSagadqehktDEMHTALMEASMDGHVEVAKLLLDSGAqsvsayarhdffpndkcerpssisytysrslvqacsdgdVKTVKKLLTEgrsvhettdeGESLLSLACSAGYYELAQVLLAMHANvedrgikgectplmeaassgrqcnlnesvsayarhdffpndksvnglqasvilipgakinahteeTQETALTLACCGGFLDVADFLLknganielgastplmEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDfprsvhaktqtgdtaLTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDfprsviggslsspsddssshlcsqgkksgvhaktqtgdtALTYACENGHTDVADLLLSYganlrnrt
Flexible Loop (DISEMBL)
slvqacsdgdvktvkklltegrsvhettdegESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTrmrnenprpqnerslvqacsdgdVKTVKKLLtegrsvhettdegESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAyarhdffpndkcerpsSISYTYSRSLVQACSDGDVKTVKKLLtegrsvhettdegESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLsyganlrnrt
Low Complexity Region (SEG)
SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHteetqetaltlaCCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGslsspsddssshlcsQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANLRNRT
Disordered region (IsUnstruct)
********************************SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEA****F***************L********C*******************************************************SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNG*****NTPLMYACAGGHEAVVRVLLECGANVEDHN***HTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA***********************************************************YTYSRSLVQACSDGDVKTVKKLLT************ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM********CNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVI********************************TALTYACENGHTDVADLLLSYGA******
Disordered Region (DISOPRED)
SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN*****
Disordered Region (DISEMBL)
SLVQACSDGDVKTVKKLLTEGRS*********SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRN*********SLVQACSDGDVKTVKKLLTEGRS*********SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRS*********SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGS************************TQTGDTALTYACENGHTDVADLLLSYGANLRNRT
Disordered Region (DISPRO)
SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYG*******
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooohhhhhhhhhhhhhhhhhhhiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiii
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANLRNRT
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	739	2.2.26 [Sep-21-2011]
Q99NH0	2603	Ankyrin repeat domain-con	no	N/A	0.711	0.202	0.562	1e-158
Q8IWZ3	2542	Ankyrin repeat and KH dom	no	N/A	0.684	0.199	0.559	1e-158
O75179	2603	Ankyrin repeat domain-con	no	N/A	0.711	0.202	0.560	1e-158
Q9VCA8	4001	Ankyrin repeat and KH dom	yes	N/A	0.645	0.119	0.518	1e-134
Q9ULJ7	1429	Ankyrin repeat domain-con	no	N/A	0.736	0.380	0.305	2e-51
Q02357	1862	Ankyrin-1 OS=Mus musculus	no	N/A	0.878	0.348	0.296	1e-47
Q01484	3957	Ankyrin-2 OS=Homo sapiens	no	N/A	0.902	0.168	0.293	3e-47
Q8C8R3	3898	Ankyrin-2 OS=Mus musculus	no	N/A	0.902	0.171	0.293	9e-47
P16157	1881	Ankyrin-1 OS=Homo sapiens	no	N/A	0.876	0.344	0.292	1e-45
G5E8K5	1961	Ankyrin-3 OS=Mus musculus	no	N/A	0.894	0.337	0.283	2e-43

>sp|Q99NH0|ANR17_MOUSE Ankyrin repeat domain-containing protein 17 OS=Mus musculus GN=Ankrd17 PE=1 SV=2

 Score =  559 bits (1440), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 333/592 (56%), Positives = 402/592 (67%), Gaps = 66/592 (11%)

Query: 69  LMEAASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNE---NPRPQNE 124
           L+EAA  G GKL+T DGK  ADPEVLRRLTSSVSCALDEAAAALTRMR E   N    + 
Sbjct: 174 LLEAA--GIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAESTANAGQSDN 231

Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184
           RSL +ACS+GDV  V+KLL EGRSV+E T+EGESLL LACSAGYYELAQVLLAMHANVED
Sbjct: 232 RSLAEACSEGDVNAVRKLLIEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVED 291

Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
           RGIKG+ TPLM AA+ G ++IV+LL+ H ADVN QSS+GNT L YACAGG+  VV+VLLE
Sbjct: 292 RGIKGDITPLMAAANGGHVKIVKLLLAHKADVNAQSSTGNTALTYACAGGYVDVVKVLLE 351

Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD 304
            GA++EDHNENGHTPLMEA SAGHV VA++LLE GAGINTHSNEFKESALTLACYKGHL+
Sbjct: 352 SGASIEDHNENGHTPLMEAGSAGHVEVARLLLENGAGINTHSNEFKESALTLACYKGHLE 411

Query: 305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQ------------SVSA 352
           MVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA+LLLDSGAQ            +++A
Sbjct: 412 MVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAA 471

Query: 353 YARHDFFPNDKCERPSSIS------YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDE 406
              H        ER +S+       YT    L++A  +G  + V  LL +G +++  T+E
Sbjct: 472 CGGHVELAALLIERGASLEEVNDEGYT---PLMEAAREGHEEMVALLLGQGANINAQTEE 528

Query: 407 -GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYA 465
             E+ L+LAC  G+ E+A  L+   A++E     G  TPLMEAA  G     +  +  Y 
Sbjct: 529 TQETALTLACCGGFLEVADFLIKAGADIE----LGCSTPLMEAAQEG-----HLELVKY- 578

Query: 466 RHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI 525
                             +L  GA ++A T  T +TALT AC  G  DVAD LL+ GA++
Sbjct: 579 ------------------LLAAGANVHA-TTATGDTALTYACENGHTDVADVLLQAGADL 619

Query: 526 E---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENGHTDVADLL 581
           E    G  TPLM+AA+ GH+  V++L+  GA V+  T   D T L+ AC  GH  V +LL
Sbjct: 620 EHESEGGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLACAGGHLAVVELL 679

Query: 582 LSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           L++GA+      D STMLIEAAKGGH +VV  LLD+P ++ A      T LT
Sbjct: 680 LAHGADPTHRLKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLAAPPPDVTQLT 731

Earliest specific in situ marker of hepatic differentiation during embryogenesis, useful for characterization of inductive events involved in hepatic specification.
Mus musculus (taxid: 10090)

>sp|Q8IWZ3|ANKH1_HUMAN Ankyrin repeat and KH domain-containing protein 1 OS=Homo sapiens GN=ANKHD1 PE=1 SV=1

 Score =  557 bits (1436), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 329/588 (55%), Positives = 395/588 (67%), Gaps = 82/588 (13%)

Query: 69  LMEAASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE--- 124
           L+EAA  G GKL+T DGK  ADPEVLRRLTSSVSCALDEAAAALTRM+ EN     +   
Sbjct: 149 LLEAA--GIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMKAENSHNAGQVDT 206

Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184
           RSL +ACSDGDV  V+KLL EGRSV+E T+EGESLL LACSAGYYELAQVLLAMHANVED
Sbjct: 207 RSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVED 266

Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
           RG KG+ TPLM A+S G+++IV+LL+ H ADVN QS++GNT L YACAGG   +V+VLL 
Sbjct: 267 RGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFVDIVKVLLN 326

Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD 304
            GAN+EDHNENGHTPLMEAASAGHV VA++LL++GAGINTHSNEFKESALTLACYKGHLD
Sbjct: 327 EGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGHLD 386

Query: 305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKC 364
           MVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA+LLLDSGAQ           P D  
Sbjct: 387 MVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQV--------NMPADSF 438

Query: 365 ERPSSIS--------------------------YTYSRSLVQACSDGDVKTVKKLLTEGR 398
           E P +++                          YT    L++A  +G  + V  LL +G 
Sbjct: 439 ESPLTLAACGGHVELAALLIERGANLEEVNDEGYT---PLMEAAREGHEEMVALLLAQGA 495

Query: 399 SVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNL 457
           +++  T+E  E+ L+LAC  G+ E+A  L+   A++E     G  TPLMEA+  G     
Sbjct: 496 NINAQTEETQETALTLACCGGFSEVADFLIKAGADIE----LGCSTPLMEASQEGHL--- 548

Query: 458 NESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADF 517
                           + V  L AS     GA ++A T  T +TALT AC  G  DVAD 
Sbjct: 549 ----------------ELVKYLLAS-----GANVHA-TTATGDTALTYACENGHTDVADV 586

Query: 518 LLKNGANIE---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENG 573
           LL+ GA++E    G  TPLM+AA+ GHL  V++L+  GA V+  T   D T ++ AC  G
Sbjct: 587 LLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLACAGG 646

Query: 574 HTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSV 616
           H  V +LLL++GA+      D STMLIEAAKGGH NVV  LLD+P +V
Sbjct: 647 HLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNV 694

May play a role as a scaffolding protein that may be associated with the abnormal phenotype of leukemia cells. Isoform 2 may possess an antiapoptotic effect and protect cells during normal cell survival through its regulation of caspases.

Homo sapiens (taxid: 9606)

>sp|O75179|ANR17_HUMAN Ankyrin repeat domain-containing protein 17 OS=Homo sapiens GN=ANKRD17 PE=1 SV=3

 Score =  557 bits (1436), Expect = e-158,   Method: Compositional matrix adjust.
 Identities = 332/592 (56%), Positives = 402/592 (67%), Gaps = 66/592 (11%)

Query: 69  LMEAASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNE---NPRPQNE 124
           L+EAA  G GKL+T DGK  ADPEVLRRLTSSVSCALDEAAAALTRMR E   N    + 
Sbjct: 178 LLEAA--GIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAESTANAGQSDN 235

Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184
           RSL +ACS+GDV  V+KLL EGRSV+E T+EGESLL LACSAGYYELAQVLLAMHANVED
Sbjct: 236 RSLAEACSEGDVNAVRKLLIEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVED 295

Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
           RGIKG+ TPLM AA+ G ++IV+LL+ H ADVN QSS+GNT L YACAGG+  VV+VLLE
Sbjct: 296 RGIKGDITPLMAAANGGHVKIVKLLLAHKADVNAQSSTGNTALTYACAGGYVDVVKVLLE 355

Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD 304
            GA++EDHNENGHTPLMEA SAGHV VA++LLE GAGINTHSNEFKESALTLACYKGHL+
Sbjct: 356 SGASIEDHNENGHTPLMEAGSAGHVEVARLLLENGAGINTHSNEFKESALTLACYKGHLE 415

Query: 305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQ------------SVSA 352
           MVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA+LLLDSGAQ            +++A
Sbjct: 416 MVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQVNMPADSFESPLTLAA 475

Query: 353 YARHDFFPNDKCERPSSIS------YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDE 406
              H        ER +S+       YT    L++A  +G  + V  LL +G +++  T+E
Sbjct: 476 CGGHVELAALLIERGASLEEVNDEGYT---PLMEAAREGHEEMVALLLGQGANINAQTEE 532

Query: 407 -GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYA 465
             E+ L+LAC  G+ E+A  L+   A++E     G  TPLMEAA  G     +  +  Y 
Sbjct: 533 TQETALTLACCGGFLEVADFLIKAGADIE----LGCSTPLMEAAQEG-----HLELVKY- 582

Query: 466 RHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI 525
                             +L  GA ++A T  T +TALT AC  G  DVAD LL+ GA++
Sbjct: 583 ------------------LLAAGANVHA-TTATGDTALTYACENGHTDVADVLLQAGADL 623

Query: 526 E---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENGHTDVADLL 581
           E    G  TPLM+AA+ GH+  V++L+  GA V+  T   D T L+ AC  GH  V +LL
Sbjct: 624 EHESEGGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLACAGGHLAVVELL 683

Query: 582 LSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           L++GA+      D STMLIEAAKGGH +VV  LLD+P ++ +      T LT
Sbjct: 684 LAHGADPTHRLKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLSAPPPDVTQLT 735

Earliest specific in situ marker of hepatic differentiation during embryogenesis, useful for characterization of inductive events involved in hepatic specification (By similarity). Target of enterovirus 71 which is the major etiological agent of HFMD (hand, foot and mouth disease).

Homo sapiens (taxid: 9606)

>sp|Q9VCA8|ANKHM_DROME Ankyrin repeat and KH domain-containing protein mask OS=Drosophila melanogaster GN=mask PE=1 SV=2

 Score =  478 bits (1230), Expect = e-134,   Method: Compositional matrix adjust.
 Identities = 294/567 (51%), Positives = 360/567 (63%), Gaps = 90/567 (15%)

Query: 92   VLRRLTSSVSCALDEAAAALTRMR-NENPRPQNE---RSLVQACSDGDVKTVKKLLTEGR 147
            VLR  T     A+DE   ALT+MR   +PR +N    RSLV AC+D DV TVK+LL +G 
Sbjct: 517  VLRHATH----AIDETKQALTKMRCASSPRDKNSGFSRSLVAACTDNDVNTVKRLLCKGN 572

Query: 148  ----SVHETTDEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIKGECTPLMEAASSGF 202
                    +TD+GESLLS+ACSAGYYELAQVLLAM A  VED+G K + TPLMEAAS+G 
Sbjct: 573  VNLNDAAASTDDGESLLSMACSAGYYELAQVLLAMSAAQVEDKGQK-DSTPLMEAASAGH 631

Query: 203  IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLME 262
            ++IV+LL+NH ADVN   ++GNTPLM+ACAGG   VV+VLL+ GANVE+ NENGHTPLME
Sbjct: 632  LDIVKLLLNHNADVNAHCATGNTPLMFACAGGQVDVVKVLLKHGANVEEQNENGHTPLME 691

Query: 263  AASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDE 322
            AASAGHV VAK+LLE+GAGINTHSNEFKESALTLACYKGHLDMVRFLL AGADQEHKTDE
Sbjct: 692  AASAGHVEVAKVLLEHGAGINTHSNEFKESALTLACYKGHLDMVRFLLQAGADQEHKTDE 751

Query: 323  MHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSIS----------- 371
            MHTALMEASMDGHVEVA+LLLDSGAQ           P D  E P +++           
Sbjct: 752  MHTALMEASMDGHVEVARLLLDSGAQV--------NMPTDSFESPLTLAACGGHVELATL 803

Query: 372  ---------------YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLAC 415
                           YT    L++A  +G  + V  LL++G +++ TT+E  E+ L+LAC
Sbjct: 804  LIERGANIEEVNDEGYT---PLMEAAREGHEEMVALLLSKGANINATTEETQETALTLAC 860

Query: 416  SAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKS 475
              G+ E+A  L+   AN+E     G  TPLMEA+  G               D       
Sbjct: 861  CGGFMEVAAFLIKEGANLE----LGASTPLMEASQEGHT-------------DLV----- 898

Query: 476  VNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIE---LGASTP 532
                  S +L   A ++A T +T +TALT AC  G  D A  LL  GA +E    G  TP
Sbjct: 899  ------SFLLKKKANVHAET-QTGDTALTHACENGHTDAAGVLLSYGAELEHESEGGRTP 951

Query: 533  LMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENGHTDVADLLLSYGANL--- 588
            LM+A + GHL  V++L+  GA V+ +T + D TAL+ AC  GH  V +LLL   A+    
Sbjct: 952  LMKACRAGHLCTVKFLIQKGANVNKQTTSNDHTALSLACAGGHQSVVELLLKNNADPFHK 1011

Query: 589  --DNSTMLIEAAKGGHANVVQLLLDFP 613
              DNSTMLIEA+KGGH  VV+LL  +P
Sbjct: 1012 LKDNSTMLIEASKGGHTRVVELLFRYP 1038

Mediator of receptor tyrosine kinase (RTK) signaling, and may act either downstream of MAPK or transduce signaling through a parallel branch of the RTK pathway.

Drosophila melanogaster (taxid: 7227)

>sp|Q9ULJ7|ANR50_HUMAN Ankyrin repeat domain-containing protein 50 OS=Homo sapiens GN=ANKRD50 PE=1 SV=4

 Score =  204 bits (519), Expect = 2e-51,   Method: Compositional matrix adjust.
 Identities = 180/590 (30%), Positives = 279/590 (47%), Gaps = 46/590 (7%)

Query: 138  TVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEA 197
            +++ LL  G SV++    G +LL+ A  +G  ++  +L++  A++E     G  TPL  A
Sbjct: 527  SIRTLLDNGASVNQCDSNGRTLLANAAYSGSLDVVNLLVSRGADLEIEDAHGH-TPLTLA 585

Query: 198  ASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGH 257
            A  G  ++V  LI  GA++N     G T L  A  GGH  VV  LL  G  V+  + +  
Sbjct: 586  ARQGHTKVVNCLIGCGANINHTDQDGWTALRSAAWGGHTEVVSALLYAGVKVDCADADSR 645

Query: 258  TPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQE 317
            T L  AA  GH  +   LL++GA +N   NE + +AL  A Y GH ++V  LL  GA+  
Sbjct: 646  TALRAAAWGGHEDIVLNLLQHGAEVNKADNEGR-TALIAAAYMGHREIVEHLLDHGAEVN 704

Query: 318  HKTDEMHTALMEASM-----DGHVEVAKLLLDSGAQS------------VSAYARHDFFP 360
            H+  +  TAL  A++      GH  V  LL+D GA+             V+AY  H    
Sbjct: 705  HEDVDGRTALSVAALCVPASKGHASVVSLLIDRGAEVDHCDKDGMTPLLVAAYEGHVDVV 764

Query: 361  NDKCERPSSISYTYSR---SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA 417
            +   E  + + +T +     L+ A S G    V  LL  G +V     EG ++LS+A + 
Sbjct: 765  DLLLEGGADVDHTDNNGRTPLLAAASMGHASVVNTLLFWGAAVDSIDSEGRTVLSIASAQ 824

Query: 418  GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVN 477
            G  E+ + LL    +   R   G  TPL  AA  G +      +   AR +   ND  + 
Sbjct: 825  GNVEVVRTLLDRGLDENHRDDAG-WTPLHMAAFEGHRLICEALIEQGARTNEIDNDGRIP 883

Query: 478  GLQAS---------VILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI--- 525
             + AS         ++L   + I+    + +  AL +A   G  D+ + L  +GA++   
Sbjct: 884  FILASQEGHYDCVQILLENKSNIDQRGYDGR-NALRVAALEGHRDIVELLFSHGADVNCK 942

Query: 526  ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYG 585
            +      L   A E  L +  Y L++GA V A    G TAL  +C  GH ++  +L++Y 
Sbjct: 943  DADGRPTLYILALENQLTMAEYFLENGANVEASDAEGRTALHVSCWQGHMEMVQVLIAYH 1002

Query: 586  ANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVAD 640
            A++     +  + L  AA  GH  VVQLL++    V      G TAL  A + GH DV  
Sbjct: 1003 ADVNAADNEKRSALQSAAWQGHVKVVQLLIEHGAVVDHTCNQGATALCIAAQEGHIDVVQ 1062

Query: 641  LLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSP 685
            +LL +GA+ +++     T +  AAK GH+ +++LL  +  S + G   SP
Sbjct: 1063 VLLEHGADPNHADQFGRTAMRVAAKNGHSQIIKLLEKYGASSLNGCSPSP 1112

Homo sapiens (taxid: 9606)

>sp|Q02357|ANK1_MOUSE Ankyrin-1 OS=Mus musculus GN=Ank1 PE=1 SV=2

 Score =  192 bits (487), Expect = 1e-47,   Method: Compositional matrix adjust.
 Identities = 223/752 (29%), Positives = 327/752 (43%), Gaps = 103/752 (13%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A  +G VK V +LL +   +  TT +G + L +A  AG  E+ + L+   ANV  +  KG
Sbjct: 48  ASKEGHVKMVVELLHKEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKG 107

Query: 65  ECTPLMEAASSGF-------------GKLATGDGKLADPEVLRRLTSSVSCAL------- 104
             TPL  AA                   +AT DG       L++   +V   L       
Sbjct: 108 -FTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKG 166

Query: 105 --------------DEAAAALTRMRNENPRPQNERSLVQ---ACSDGDVKTVKKLLTEGR 147
                         D   AA+    + NP   ++        A    ++   + LL  G 
Sbjct: 167 KVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGA 226

Query: 148 SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVR 207
           SV+ T   G + L +A   G   + ++LL   A +E R  K E TPL  AA +G + I  
Sbjct: 227 SVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETR-TKDELTPLHCAARNGHVRISE 285

Query: 208 LLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG 267
           +L++HGA +  ++ +G +P+  A  G H   VR+LL+  A ++D   +  TPL  AA  G
Sbjct: 286 ILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYNAEIDDITLDHLTPLHVAAHCG 345

Query: 268 HVGVAKILLEYGAGINTHS-NEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTA 326
           H  VAK+LL+ GA  N+ + N F  + L +AC K H+ ++  LL  GA  +  T+   T 
Sbjct: 346 HHRVAKVLLDKGAKPNSRALNGF--TPLHIACKKNHIRVMELLLKTGASIDAVTESGLTP 403

Query: 327 LMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSIS-----YTYSRSLVQ- 380
           L  AS  GH+ + K LL  GA    +        N K E P  ++        ++ L+Q 
Sbjct: 404 LHVASFMGHLPIVKNLLQRGASPNVS--------NVKVETPLHMAARAGHTEVAKYLLQN 455

Query: 381 -----------------ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELA 423
                            A   G    VK LL  G S +  T  G + L  A   G+ + A
Sbjct: 456 KAKANAKAKDDQTPLHCAARIGHTGMVKLLLENGASPNLATTAGHTPLHTAAREGHVDTA 515

Query: 424 QVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQA-- 481
             LL   A+      KG  TPL  AA  G+   L E +     HD  PN    NGL    
Sbjct: 516 LALLEKEASQACMTKKG-FTPLHVAAKYGK-VRLAELL---LEHDAHPNAAGKNGLTPLH 570

Query: 482 ----------SVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNG--ANIE-LG 528
                       +L+P             T L +A     ++VA  LL+ G  AN E + 
Sbjct: 571 VAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQIEVARSLLQYGGSANAESVQ 630

Query: 529 ASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 588
             TPL  AAQEGH E+V  LL   A  +   ++G T L    + GH  VAD+L+ +G  +
Sbjct: 631 GVTPLHLAAQEGHTEMVALLLSKQANGNLGNKSGLTPLHLVSQEGHVPVADVLIKHGVTV 690

Query: 589 DNSTM-----LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLL 643
           D +T      L  A+  G+  +V+ LL     V+AKT+ G + L  A + GHTD+  LLL
Sbjct: 691 DATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLL 750

Query: 644 SYGANLDN-----STMLIEAAKGGHANVVQLL 670
             GA+ +      +T L  A + G+ +V  +L
Sbjct: 751 KNGASPNEVSSNGTTPLAIAKRLGYISVTDVL 782

Attaches integral membrane proteins to cytoskeletal elements; binds to the erythrocyte membrane protein band 4.2, to Na-K ATPase, to the lymphocyte membrane protein GP85, and to the cytoskeletal proteins fodrin, tubulin, vimentin and desmin. Erythrocyte ankyrins also link spectrin (beta chain) to the cytoplasmic domain of the erythrocytes anion exchange protein; they retain most or all of these binding functions. In skeletal muscle, isoform Mu7 together with obscurin may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Mus musculus (taxid: 10090)

>sp|Q01484|ANK2_HUMAN Ankyrin-2 OS=Homo sapiens GN=ANK2 PE=1 SV=4

 Score =  190 bits (483), Expect = 3e-47,   Method: Compositional matrix adjust.
 Identities = 229/779 (29%), Positives = 343/779 (44%), Gaps = 112/779 (14%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A  +G V  V++LL  G SV   T +G + L +A  AG  E+ +VL+   AN+  +   G
Sbjct: 71  AAKEGHVGLVQELLGRGSSVDSATKKGNTALHIASLAGQAEVVKVLVKEGANINAQSQNG 130

Query: 65  ECTPLMEAASSGFGKL-------------ATGDGKLADPEVLRRLTSSVSCALDEAAAAL 111
             TPL  AA      +             AT DG          L  ++    ++A A L
Sbjct: 131 -FTPLYMAAQENHIDVVKYLLENGANQSTATEDG-------FTPLAVALQQGHNQAVAIL 182

Query: 112 TRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRS--------VHETTDEGESLLSLA 163
             + N+        +L  A    D K+   LL    +        V+ TT+ G + L +A
Sbjct: 183 --LENDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTESGFTPLHIA 240

Query: 164 CSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSG 223
              G   +A +LL   A V D   +   TPL  A+  G   +V+LL++ G  ++ ++  G
Sbjct: 241 AHYGNVNVATLLLNRGAAV-DFTARNGITPLHVASKRGNTNMVKLLLDRGGQIDAKTRDG 299

Query: 224 NTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGIN 283
            TPL  A   GH+ VV +LLE GA +    +NG +PL  AA   HV   K LL++ A ++
Sbjct: 300 LTPLHCAARSGHDQVVELLLERGAPLLARTKNGLSPLHMAAQGDHVECVKHLLQHKAPVD 359

Query: 284 THSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLL 343
             + ++  +AL +A + GH  + + LL   A+   +     T L  A     ++V +LL+
Sbjct: 360 DVTLDYL-TALHVAAHCGHYRVTKLLLDKRANPNARALNGFTPLHIACKKNRIKVMELLV 418

Query: 344 DSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHET 403
             GA S+ A       P                 +  A   G +  V  LL  G S   T
Sbjct: 419 KYGA-SIQAITESGLTP-----------------IHVAAFMGHLNIVLLLLQNGASPDVT 460

Query: 404 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSA 463
              GE+ L +A  AG  E+ + LL   A V+ R  + E TPL  A+  G+     E V  
Sbjct: 461 NIRGETALHMAARAGQVEVVRCLLRNGALVDARA-REEQTPLHIASRLGK----TEIVQL 515

Query: 464 YARHDFFPNDKSVNGLQ-------------ASVILIPGAKINAHTEETQE--TALTLACC 508
             +H   P+  + NG               ASV+L  GA   AH+  T++  T L +A  
Sbjct: 516 LLQHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGA---AHSLATKKGFTPLHVAAK 572

Query: 509 GGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTA 565
            G LDVA  LL+  A  +       TPL  AA   + ++   LL+ GA  HA  + G T 
Sbjct: 573 YGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNGYTP 632

Query: 566 LTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHAKT 620
           L  A +     +A  LL+YGA  +       T L  A++ GH ++V LLLD   ++H  T
Sbjct: 633 LHIAAKKNQMQIASTLLNYGAETNIVTKQGVTPLHLASQEGHTDMVTLLLDKGANIHMST 692

Query: 621 QTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPR 675
           ++G T+L  A +    +VAD+L  +GA+ D       T LI A   G+  +V  LL    
Sbjct: 693 KSGLTSLHLAAQEDKVNVADILTKHGADQDAHTKLGYTPLIVACHYGNVKMVNFLL---- 748

Query: 676 SVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                               QG  + V+AKT+ G T L  A + GHT + ++LL +GA 
Sbjct: 749 -------------------KQG--ANVNAKTKNGYTPLHQAAQQGHTHIINVLLQHGAK 786

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes. Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Homo sapiens (taxid: 9606)

>sp|Q8C8R3|ANK2_MOUSE Ankyrin-2 OS=Mus musculus GN=Ank2 PE=1 SV=2

 Score =  189 bits (479), Expect = 9e-47,   Method: Compositional matrix adjust.
 Identities = 229/779 (29%), Positives = 342/779 (43%), Gaps = 112/779 (14%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A  +G V  V++LL  G SV   T +G + L +A  AG  E+ +VL+   AN+  +   G
Sbjct: 71  AAKEGHVGLVQELLGRGSSVDSATKKGNTALHIASLAGQAEVVKVLVKEGANINAQSQNG 130

Query: 65  ECTPLMEAASSGFGKL-------------ATGDGKLADPEVLRRLTSSVSCALDEAAAAL 111
             TPL  AA      +             AT DG          L  ++    ++A A L
Sbjct: 131 -FTPLYMAAQENHIDVVKYLLENGANQSTATEDG-------FTPLAVALQQGHNQAVAIL 182

Query: 112 TRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRS--------VHETTDEGESLLSLA 163
             + N+        +L  A    D K+   LL    +        V+ TT+ G + L +A
Sbjct: 183 --LENDTKGKVRLPALHIAARKDDTKSAALLLQNDHNADVQSKMMVNRTTESGFTPLHIA 240

Query: 164 CSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSG 223
              G   +A +LL   A V D   +   TPL  A+  G   +V+LL++ G  ++ ++  G
Sbjct: 241 AHYGNVNVATLLLNRGAAV-DFTARNGITPLHVASKRGNTNMVKLLLDRGGQIDAKTRDG 299

Query: 224 NTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGIN 283
            TPL  A   GH+ VV +LLE  A +    +NG +PL  AA   HV   K LL+Y A ++
Sbjct: 300 LTPLHCAARSGHDQVVELLLERKAPLLARTKNGLSPLHMAAQGDHVECVKHLLQYKAPVD 359

Query: 284 THSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLL 343
             + ++  +AL +A + GH  + + LL   A+   +     T L  A     ++V +LL+
Sbjct: 360 DVTLDYL-TALHVAAHCGHYRVTKLLLDKRANPNARALNGFTPLHIACKKNRIKVMELLV 418

Query: 344 DSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHET 403
             GA S+ A       P                 +  A   G +  V  LL  G S   T
Sbjct: 419 KYGA-SIQAITESGLTP-----------------IHVAAFMGHLNIVLLLLQNGASPDVT 460

Query: 404 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSA 463
              GE+ L +A  AG  E+ + LL   A V+ R  + E TPL  A+  G+     E V  
Sbjct: 461 NIRGETALHMAARAGQVEVVRCLLRNGALVDARA-REEQTPLHIASRLGK----TEIVQL 515

Query: 464 YARHDFFPNDKSVNGLQ-------------ASVILIPGAKINAHTEETQE--TALTLACC 508
             +H   P+  + NG               ASV+L  GA   AH+  T++  T L +A  
Sbjct: 516 LLQHMAHPDAATTNGYTPLHISAREGQVDVASVLLEAGA---AHSLATKKGFTPLHVAAK 572

Query: 509 GGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTA 565
            G LDVA  LL+  A  +       TPL  AA   + ++   LL+ GA  HA  + G T 
Sbjct: 573 YGSLDVAKLLLQRRAAADSAGKNGLTPLHVAAHYDNQKVALLLLEKGASPHATAKNGYTP 632

Query: 566 LTYACENGHTDVADLLLSYGANLDNSTM-----LIEAAKGGHANVVQLLLDFPRSVHAKT 620
           L  A +     +A  LL+YGA  +  T      L  A++ GH ++V LLLD   ++H  T
Sbjct: 633 LHIAAKKNQMQIASTLLNYGAETNTVTKQGVTPLHLASQEGHTDMVTLLLDKGANIHMST 692

Query: 621 QTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPR 675
           ++G T+L  A +    +VAD+L  +GA+ D       T LI A   G+  +V  LL    
Sbjct: 693 KSGLTSLHLAAQEDKVNVADILTKHGADRDAYTKLGYTPLIVACHYGNVKMVNFLL---- 748

Query: 676 SVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                               QG  + V+AKT+ G T L  A + GHT + ++LL +GA 
Sbjct: 749 -------------------KQG--ANVNAKTKNGYTPLHQAAQQGHTHIINVLLQHGAK 786

Attaches integral membrane proteins to cytoskeletal elements. Also binds to cytoskeletal proteins. Required for coordinate assembly of Na/Ca exchanger, Na/K ATPase and InsP3 receptor at sarcoplasmic reticulum sites in cardiomyocytes (By similarity). Required for the coordinated expression of the Na/K ATPase, Na/Ca exchanger and beta-2-spectrin (SPTBN1) in the inner segment of rod photoreceptors. Required for expression and targeting of SPTBN1 in neonatal cardiomyocytes and for the regulation of neonatal cardiomyocyte contraction rate.

Mus musculus (taxid: 10090)

>sp|P16157|ANK1_HUMAN Ankyrin-1 OS=Homo sapiens GN=ANK1 PE=1 SV=3

 Score =  185 bits (470), Expect = 1e-45,   Method: Compositional matrix adjust.
 Identities = 220/753 (29%), Positives = 324/753 (43%), Gaps = 105/753 (13%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A  +G VK V +LL +   +  TT +G + L +A  AG  E+ + L+   ANV  +  KG
Sbjct: 52  ASKEGHVKMVVELLHKEIILETTTKKGNTALHIAALAGQDEVVRELVNYGANVNAQSQKG 111

Query: 65  ECTPLMEAASSGF-------------GKLATGDGKLADPEVLRRLTSSVSCAL------- 104
             TPL  AA                   +AT DG       L++   +V   L       
Sbjct: 112 -FTPLYMAAQENHLEVVKFLLENGANQNVATEDGFTPLAVALQQGHENVVAHLINYGTKG 170

Query: 105 --------------DEAAAALTRMRNENPRPQNERSLVQ---ACSDGDVKTVKKLLTEGR 147
                         D   AA+    + NP   ++        A    ++   + LL  G 
Sbjct: 171 KVRLPALHIAARNDDTRTAAVLLQNDPNPDVLSKTGFTPLHIAAHYENLNVAQLLLNRGA 230

Query: 148 SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVR 207
           SV+ T   G + L +A   G   + ++LL   A +E +  K E TPL  AA +G + I  
Sbjct: 231 SVNFTPQNGITPLHIASRRGNVIMVRLLLDRGAQIETK-TKDELTPLHCAARNGHVRISE 289

Query: 208 LLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG 267
           +L++HGA +  ++ +G +P+  A  G H   VR+LL+  A ++D   +  TPL  AA  G
Sbjct: 290 ILLDHGAPIQAKTKNGLSPIHMAAQGDHLDCVRLLLQYDAEIDDITLDHLTPLHVAAHCG 349

Query: 268 HVGVAKILLEYGAGINTHS-NEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTA 326
           H  VAK+LL+ GA  N+ + N F  + L +AC K H+ ++  LL  GA  +  T+   T 
Sbjct: 350 HHRVAKVLLDKGAKPNSRALNGF--TPLHIACKKNHVRVMELLLKTGASIDAVTESGLTP 407

Query: 327 LMEASMDGHVEVAKLLLDSGA-QSVSAYARHDFFPNDKCERPSSIS-----YTYSRSLVQ 380
           L  AS  GH+ + K LL  GA  +VS         N K E P  ++        ++ L+Q
Sbjct: 408 LHVASFMGHLPIVKNLLQRGASPNVS---------NVKVETPLHMAARAGHTEVAKYLLQ 458

Query: 381 ------------------ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYEL 422
                             A   G    VK LL    + +  T  G + L +A   G+ E 
Sbjct: 459 NKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVET 518

Query: 423 AQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQA- 481
              LL   A+      KG  TPL  AA  G+              D  PN    NGL   
Sbjct: 519 VLALLEKEASQACMTKKG-FTPLHVAAKYGKV----RVAELLLERDAHPNAAGKNGLTPL 573

Query: 482 -----------SVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNG--ANIE-L 527
                        +L+P             T L +A     ++VA  LL+ G  AN E +
Sbjct: 574 HVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESV 633

Query: 528 GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
              TPL  AAQEGH E+V  LL   A  +   ++G T L    + GH  VAD+L+ +G  
Sbjct: 634 QGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVM 693

Query: 588 LDNSTM-----LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
           +D +T      L  A+  G+  +V+ LL     V+AKT+ G + L  A + GHTD+  LL
Sbjct: 694 VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLL 753

Query: 643 LSYGANL-----DNSTMLIEAAKGGHANVVQLL 670
           L  GA+      D +T L  A + G+ +V  +L
Sbjct: 754 LKNGASPNEVSSDGTTPLAIAKRLGYISVTDVL 786

Isoform Mu17 together with obscurin in skeletal muscle may provide a molecular link between the sarcoplasmic reticulum and myofibrils.

Homo sapiens (taxid: 9606)

>sp|G5E8K5|ANK3_MOUSE Ankyrin-3 OS=Mus musculus GN=Ank3 PE=1 SV=1

 Score =  177 bits (450), Expect = 2e-43,   Method: Compositional matrix adjust.
 Identities = 225/795 (28%), Positives = 347/795 (43%), Gaps = 134/795 (16%)

Query: 1   SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 60
           S ++A   G ++     +  G  V+     G + L LA   G+ E+   LL   ANV+  
Sbjct: 27  SYLRAARAGHLEKALDYIKNGVDVNICNQNGLNALHLASKEGHVEVVSELLQREANVDAA 86

Query: 61  GIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPR 120
             KG  T L  A+ +G              EV++ L              +T   N N +
Sbjct: 87  TKKGN-TALHIASLAGQA------------EVVKVL--------------VTNGANVNAQ 119

Query: 121 PQNERS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL--- 176
            QN  + L  A  +  ++ V+ LL  G S    T++G + L++A   G+ ++  +LL   
Sbjct: 120 SQNGFTPLYMAAQENHLEVVRFLLDNGASQSLATEDGFTPLAVALQQGHDQVVSLLLEND 179

Query: 177 --------AMH--------------------ANVEDRGIKGECTPLMEAASSGFIEIVRL 208
                   A+H                    A+VE    K   TPL  AA  G I +  L
Sbjct: 180 TKGKVRLPALHIAARKDDTKAAALLLQNDTNADVES---KSGFTPLHIAAHYGNINVATL 236

Query: 209 LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH 268
           L+N  A V+  + +  TPL  A   G+  +V++LL+ GA ++    +G TPL   A +GH
Sbjct: 237 LLNRAAAVDFTARNDITPLHVASKRGNANMVKLLLDRGAKIDAKTRDGLTPLHCGARSGH 296

Query: 269 VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALM 328
             V ++LL+  A I + +     S L +A    HL+ V+ LL      +  T++  TAL 
Sbjct: 297 EQVVEMLLDRSAPILSKTKN-GLSPLHMATQGDHLNCVQLLLQHNVPVDDVTNDYLTALH 355

Query: 329 EASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVK 388
            A+  GH +VAK+LLD  A S +A A + F P                 L  AC    ++
Sbjct: 356 VAAHCGHYKVAKVLLDKKA-SPNAKALNGFTP-----------------LHIACKKNRIR 397

Query: 389 TVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEA 448
            ++ LL  G S+   T+ G + + +A   G+  +   L+   A+     ++GE T L  A
Sbjct: 398 VMELLLKHGASIQAVTESGLTPIHVAAFMGHVNIVSQLMHHGASPNTTNVRGE-TALHMA 456

Query: 449 ASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACC 508
           A SG+       V  Y   D                   GA++ A  ++ Q T L ++  
Sbjct: 457 ARSGQ-----AEVVRYLVQD-------------------GAQVEAKAKDDQ-TPLHISAR 491

Query: 509 GGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTA 565
            G  D+   LL+ GA+     +   TPL  AA+EGH ++  +LLD GA +   T+ G T 
Sbjct: 492 LGKADIVQQLLQQGASPNAATTSGYTPLHLAAREGHEDVAAFLLDHGASLSITTKKGFTP 551

Query: 566 LTYACENGHTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPRSVHAKT 620
           L  A + G  +VA LLL   A+ D +     T L  AA   +  V  LLLD   S HA  
Sbjct: 552 LHVAAKYGKLEVASLLLQKSASPDAAGKSGLTPLHVAAHYDNQKVALLLLDQGASPHAAA 611

Query: 621 QTGDTALTYACENGHTDVADLLLSYGANLDNSTM-----LIEAAKGGHANVVQLLLDFPR 675
           + G T L  A +    D+A  LL YGA+ +  T      +  AA+ GH ++V LLL    
Sbjct: 612 KNGYTPLHIAAKKNQMDIATSLLEYGADANAVTRQGIASVHLAAQEGHVDMVSLLLSRNA 671

Query: 676 SVIGGSLSSPSDDSSSHLCSQGKK---------SGVH--AKTQTGDTALTYACENGHTDV 724
           +V   +LS+ S  +  HL +Q  +          G H  A+T+ G T L   C  G+  +
Sbjct: 672 NV---NLSNKSGLTPLHLAAQEDRVNVAEVLVNQGAHVDAQTKMGYTPLHVGCHYGNIKI 728

Query: 725 ADLLLSYGANLRNRT 739
            + LL + A +  +T
Sbjct: 729 VNFLLQHSAKVNAKT 743

Membrane-cytoskeleton linker. May participate in the maintenance/targeting of ion channels and cell adhesion molecules at the nodes of Ranvier and axonal initial segments (By similarity). In skeletal muscle, required for costamere localization of DMD and betaDAG1.

Mus musculus (taxid: 10090)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	739
332234642	2542	PREDICTED: ankyrin repeat and KH domain-	0.745	0.216	0.578	0.0
270002082	2691	hypothetical protein TcasGA2_TC001033 [T	0.714	0.196	0.565	1e-177
328790111	3136	PREDICTED: hypothetical protein LOC40998	0.690	0.162	0.596	1e-174
350419534	3091	PREDICTED: hypothetical protein LOC10074	0.690	0.164	0.594	1e-174
307212336	2982	Ankyrin repeat domain-containing protein	0.684	0.169	0.597	1e-173
242019742	2803	multiple ankyrin repeats single kh domai	0.686	0.180	0.597	1e-173
307186886	2898	Ankyrin repeat domain-containing protein	0.698	0.178	0.591	1e-173
332022374	3049	Ankyrin repeat and KH domain-containing	0.698	0.169	0.59	1e-173
189234573	2677	PREDICTED: similar to Ankyrin repeat dom	0.702	0.193	0.58	1e-172
126330668	2360	PREDICTED: ankyrin repeat domain-contain	0.845	0.264	0.496	1e-162

>gi|332234642|ref|XP_003266514.1| PREDICTED: ankyrin repeat and KH domain-containing protein 1 isoform 1 [Nomascus leucogenys]

 Score =  644 bits (1660), Expect = 0.0,   Method: Compositional matrix adjust.
 Identities = 372/643 (57%), Positives = 435/643 (67%), Gaps = 92/643 (14%)

Query: 69  LMEAASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE--- 124
           L+EAA  G GKL+T DGK  ADPEVLRRLTSSVSCALDEAAAALTRM+ EN     +   
Sbjct: 142 LLEAA--GIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMKAENSHNAGQVDT 199

Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184
           RSL +ACSDGDV  V+KLL EGRSV+E T+EGESLL LACSAGYYELAQVLLAMHANVED
Sbjct: 200 RSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVED 259

Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
           RG KG+ TPLM A+S G+++IV+LL+ H ADVN QS++GNT L YACAGG   +V+VLL 
Sbjct: 260 RGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQSATGNTALTYACAGGFVDIVKVLLN 319

Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD 304
            GAN+EDHNENGHTPLMEAASAGHV VA++LL++GAGINTHSNEFKESALTLACYKGHLD
Sbjct: 320 EGANIEDHNENGHTPLMEAASAGHVEVARVLLDHGAGINTHSNEFKESALTLACYKGHLD 379

Query: 305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKC 364
           MVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA+LLLDSGAQ                
Sbjct: 380 MVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQ---------------- 423

Query: 365 ERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQ 424
                                              V+   D  ES L+LA   G+ ELA 
Sbjct: 424 -----------------------------------VNMPADSFESPLTLAACGGHVELAA 448

Query: 425 VLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVI 484
           +L+   AN+E+   +G  TPLMEAA  G +    E V+           K+V  L    +
Sbjct: 449 LLIERGANLEEVNDEG-YTPLMEAAREGHE----EMVAL-----LLAQGKAVLLLLEKSV 498

Query: 485 LIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLEL 544
              G  +       + TALTLACCGGF +VADFL+K GA+IELG STPLMEA+QEGHLEL
Sbjct: 499 FF-GCFV-------KYTALTLACCGGFSEVADFLIKAGADIELGCSTPLMEASQEGHLEL 550

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS-----TMLIEAAK 599
           V+YLL SGA VHA T TGDTALTYACENGHTDVAD+LL  GA+L++      T L++AA+
Sbjct: 551 VKYLLASGANVHATTATGDTALTYACENGHTDVADVLLQAGADLEHESEGGRTPLMKAAR 610

Query: 600 GGHANVVQLLLDFPRSVHAKTQTGD-TALTYACENGHTDVADLLLSYGANL-----DNST 653
            GH   VQ L+    +V+  T   D T ++ AC  GH  V +LLL++GA+      D ST
Sbjct: 611 AGHLCTVQFLISKGANVNRATANNDHTVVSLACAGGHLAVVELLLAHGADPTHRLKDGST 670

Query: 654 MLIEAAKGGHANVVQLLLDFPRSVIG------GSLSSPSDDSS 690
           MLIEAAKGGH NVV  LLD+P +V+         L  PS D S
Sbjct: 671 MLIEAAKGGHTNVVSYLLDYPNNVLSVPTTDVSQLPPPSQDQS 713

Source: Nomascus leucogenys

Species: Nomascus leucogenys

Genus: Nomascus

Family: Hylobatidae

Order: Primates

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

>gi|270002082|gb|EEZ98529.1| hypothetical protein TcasGA2_TC001033 [Tribolium castaneum]

 Score =  627 bits (1617), Expect = e-177,   Method: Compositional matrix adjust.
 Identities = 365/646 (56%), Positives = 423/646 (65%), Gaps = 118/646 (18%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH--ANVEDRGI 62
           ACS  D K + KLL       E T E ES +       + E  QV+ A +     EDR +
Sbjct: 113 ACSFEDEKLIDKLL------EEVTVEVESFM---IDQEFEEDTQVVAAKYLLNPDEDRAV 163

Query: 63  KGECTPLMEA--ASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNENP 119
             E    +EA   ++G  +LA  DGK LADPEVLRRLTSSVSCALDEAAAALTRMR++NP
Sbjct: 164 DPETQARLEALLQAAGISQLAAKDGKHLADPEVLRRLTSSVSCALDEAAAALTRMRSDNP 223

Query: 120 RPQNER-SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM 178
           R Q E+ SLV+AC+DGDV TV+KLLTEGRSVHET++EGESLLSLACSAGYYELAQVLLAM
Sbjct: 224 RTQPEKISLVEACTDGDVGTVRKLLTEGRSVHETSEEGESLLSLACSAGYYELAQVLLAM 283

Query: 179 HANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAV 238
           HANVEDRGIKGECTPLMEAAS+G ++IV+LL+ HGADVN QS+SGNTPLMY CAGGH  V
Sbjct: 284 HANVEDRGIKGECTPLMEAASAGHLDIVKLLVKHGADVNAQSTSGNTPLMYGCAGGHTKV 343

Query: 239 VRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLAC 298
           V  LLE GANVEDHNENGHTPLMEAASAGHV +AKILL+ GAGINTHSNEFKESALTLAC
Sbjct: 344 VEFLLEHGANVEDHNENGHTPLMEAASAGHVDLAKILLKRGAGINTHSNEFKESALTLAC 403

Query: 299 YKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDF 358
           YKGHL+MVRFLL AGADQEHKTDEMHTALMEASMDGHVEVA+LLLDSGAQ          
Sbjct: 404 YKGHLEMVRFLLEAGADQEHKTDEMHTALMEASMDGHVEVARLLLDSGAQ---------- 453

Query: 359 FPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG 418
                                                    V+  TD  ES L+LA   G
Sbjct: 454 -----------------------------------------VNMPTDSFESPLTLAACGG 472

Query: 419 YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNG 478
           + +LA +L+   AN+E+   +G  TPLMEAA  G +  ++                    
Sbjct: 473 HVDLAMLLIERGANIEEVNDEG-YTPLMEAAREGHEEMVH-------------------- 511

Query: 479 LQASVILIPGAKINAHTEETQETALTLACCGGF------------------LDVADFLLK 520
               ++L  GA INA T+ETQETALTLACCGGF                   DVAD LL+
Sbjct: 512 ----LLLGQGANINAQTDETQETALTLACCGGFTETQTGDTALTYACENGHTDVADLLLQ 567

Query: 521 NGANIE---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENGHTD 576
            GA++E    G  TPLM+A + GHL  V++L+  GA V  +T   D T L+ AC  GH  
Sbjct: 568 YGADLEHESEGGRTPLMKACRAGHLCTVQFLISKGANVRRQTTNNDHTPLSLACAGGHLA 627

Query: 577 VADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVH 617
           V +LLLS+ A+      DNSTMLIEAAKGGH NVVQLLLD+P S+ 
Sbjct: 628 VVELLLSHNADPCHKLKDNSTMLIEAAKGGHTNVVQLLLDYPHSMQ 673

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|328790111|ref|XP_393472.4| PREDICTED: hypothetical protein LOC409983 [Apis mellifera]

 Score =  619 bits (1595), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 352/590 (59%), Positives = 412/590 (69%), Gaps = 80/590 (13%)

Query: 69  LMEAASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE-RS 126
           L+E A  G GKL++GDGK L D EVLRR+TSSVSCALDEAAAALTRMR++NPR QNE RS
Sbjct: 112 LLEVA--GIGKLSSGDGKHLPDHEVLRRITSSVSCALDEAAAALTRMRSDNPRTQNEKRS 169

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           LV+AC+DGDV TVKKLLTEGRSVHETT+EGESLLSLACSAGYYELAQVLLAM ANVEDRG
Sbjct: 170 LVEACTDGDVGTVKKLLTEGRSVHETTEEGESLLSLACSAGYYELAQVLLAMSANVEDRG 229

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
           IKG+CTPLMEAAS+G +++V LLI HGADVN QS+SGNTPLMY CAGGHE VVRVLLE G
Sbjct: 230 IKGDCTPLMEAASAGHVDVVSLLIAHGADVNAQSTSGNTPLMYGCAGGHEEVVRVLLEAG 289

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
           ANVEDHNENGHTPLMEAASAGHV VAKILLE+GAGINTHSNEFKESALTLACYKGHL+MV
Sbjct: 290 ANVEDHNENGHTPLMEAASAGHVPVAKILLEHGAGINTHSNEFKESALTLACYKGHLEMV 349

Query: 307 RFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCER 366
           RFLL AGADQEHKTDEMHTALMEASMDGHVEVA+LLLDSGAQ           P D  E 
Sbjct: 350 RFLLEAGADQEHKTDEMHTALMEASMDGHVEVARLLLDSGAQV--------NMPTDSFES 401

Query: 367 PSSIS--------------------------YTYSRSLVQACSDGDVKTVKKLLTEGRSV 400
           P +++                          YT    L++A  +G  + V  LL++G ++
Sbjct: 402 PLTLAACGGHVDLAMLLIERGANIEEVNDEGYT---PLMEAAREGHEEMVALLLSQGANI 458

Query: 401 HETTDEG-ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
           +  T+E  E+ L+LAC  G+ E+A  L+   A++E     G  TPLMEAA  G       
Sbjct: 459 NAQTEETQETALTLACCGGFLEVADFLIKAGADIE----LGASTPLMEAAQEGHL----- 509

Query: 460 SVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLL 519
                 R+                +L   A ++A T+ T +TALT AC  G  DVAD LL
Sbjct: 510 ---ELVRY----------------LLESAADVHAQTQ-TGDTALTYACENGHTDVADLLL 549

Query: 520 KNGANIE---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENGHT 575
           + GA++E    G  TPLM+A + GHL  V++L+   A V+ +T   D T L+ AC  GH 
Sbjct: 550 QFGADLEHESEGGRTPLMKACRAGHLCTVQFLISKRADVNRQTTNNDHTPLSLACAGGHL 609

Query: 576 DVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKT 620
            V +LLL+  AN      DNSTMLIEAAKGGH +VVQLLLD+P S+   T
Sbjct: 610 AVVELLLAQSANPFHKLKDNSTMLIEAAKGGHTSVVQLLLDYPHSIMMST 659

Source: Apis mellifera

Species: Apis mellifera

Genus: Apis

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350419534|ref|XP_003492217.1| PREDICTED: hypothetical protein LOC100740063 [Bombus impatiens]

 Score =  618 bits (1593), Expect = e-174,   Method: Compositional matrix adjust.
 Identities = 351/590 (59%), Positives = 412/590 (69%), Gaps = 80/590 (13%)

Query: 69  LMEAASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE-RS 126
           L+E A  G GKL++GDGK L D EVLRR+TSSVSCALDEAAAALTRMR++NPR QNE RS
Sbjct: 112 LLEVA--GIGKLSSGDGKHLPDHEVLRRITSSVSCALDEAAAALTRMRSDNPRTQNEKRS 169

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           LV+AC+DGDV TV+KLLTEGRSVHETT+EGESLLSLACSAGYYELAQVLLAM ANVEDRG
Sbjct: 170 LVEACTDGDVGTVRKLLTEGRSVHETTEEGESLLSLACSAGYYELAQVLLAMSANVEDRG 229

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
           IKG+CTPLMEAAS+G +++V LLI HGADVN QS+SGNTPLMY CAGGHE VVRVLLE G
Sbjct: 230 IKGDCTPLMEAASAGHVDVVSLLIAHGADVNAQSTSGNTPLMYGCAGGHEEVVRVLLEAG 289

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
           ANVEDHNENGHTPLMEAASAGHV VAKILLE+GAGINTHSNEFKESALTLACYKGHL+MV
Sbjct: 290 ANVEDHNENGHTPLMEAASAGHVPVAKILLEHGAGINTHSNEFKESALTLACYKGHLEMV 349

Query: 307 RFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCER 366
           RFLL AGADQEHKTDEMHTALMEASMDGHVEVA+LLLDSGAQ           P D  E 
Sbjct: 350 RFLLEAGADQEHKTDEMHTALMEASMDGHVEVARLLLDSGAQV--------NMPTDSFES 401

Query: 367 PSSIS--------------------------YTYSRSLVQACSDGDVKTVKKLLTEGRSV 400
           P +++                          YT    L++A  +G  + V  LL++G ++
Sbjct: 402 PLTLAACGGHVDLAMLLIERGANIEEVNDEGYT---PLMEAAREGHEEMVALLLSQGANI 458

Query: 401 HETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
           +  T+E  E+ L+LAC  G+ E+A  L+   A++E     G  TPLMEAA  G       
Sbjct: 459 NAQTEETQETALTLACCGGFLEVADFLIKAGADIE----LGASTPLMEAAQEGHL----- 509

Query: 460 SVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLL 519
                 R+                +L   A ++A T+ T +TALT AC  G  DVAD LL
Sbjct: 510 ---ELVRY----------------LLESAADVHAQTQ-TGDTALTYACENGHTDVADLLL 549

Query: 520 KNGANIE---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENGHT 575
           + GA++E    G  TPLM+A + GHL  V++L+   A V+ +T   D T L+ AC  GH 
Sbjct: 550 QFGADLEHESEGGRTPLMKACRAGHLCTVQFLITKRADVNRQTTNNDHTPLSLACAGGHL 609

Query: 576 DVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKT 620
            V +LLL+  AN      DNSTMLIEAAKGGH +VVQLLLD+P S+   T
Sbjct: 610 AVVELLLAQSANPFHKLKDNSTMLIEAAKGGHTSVVQLLLDYPHSIMMST 659

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307212336|gb|EFN88140.1| Ankyrin repeat domain-containing protein 17 [Harpegnathos saltator]

 Score =  617 bits (1590), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 350/586 (59%), Positives = 412/586 (70%), Gaps = 80/586 (13%)

Query: 69  LMEAASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNENPR-PQNERS 126
           L+EAA  G GKL++GDGK LAD EVLRRLTSSVSCALDEAAAALTRMR++NPR P  +R+
Sbjct: 119 LLEAA--GIGKLSSGDGKHLADHEVLRRLTSSVSCALDEAAAALTRMRSDNPRTPNEKRT 176

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L++AC+DGDV TV+KLLTEGRSVHETT+EGESLLSLACSAGYYELAQVLLAM+ANVEDRG
Sbjct: 177 LIEACTDGDVGTVRKLLTEGRSVHETTEEGESLLSLACSAGYYELAQVLLAMNANVEDRG 236

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
           IKG+CTPLMEAAS+G ++IV LLI HGADVN QS+SGNTPLMY CAGGHE VVRVLLE G
Sbjct: 237 IKGDCTPLMEAASAGHVDIVSLLIAHGADVNAQSTSGNTPLMYGCAGGHEEVVRVLLEAG 296

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
           ANVEDHNENGHTPLMEAASAGHV VAKILLE+GAGINTHSNEFKESALTLACYKGHL+MV
Sbjct: 297 ANVEDHNENGHTPLMEAASAGHVPVAKILLEHGAGINTHSNEFKESALTLACYKGHLEMV 356

Query: 307 RFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCER 366
           RFLL AGADQEHKTDEMHTALMEASMDGHVEVA+LLLDSGAQ           P D  E 
Sbjct: 357 RFLLEAGADQEHKTDEMHTALMEASMDGHVEVARLLLDSGAQV--------NMPTDSFES 408

Query: 367 PSSIS--------------------------YTYSRSLVQACSDGDVKTVKKLLTEGRSV 400
           P +++                          YT    L++A  +G  + V  LL++G ++
Sbjct: 409 PLTLAACGGHVDLAMLLIERGANIEEVNDEGYT---PLMEAAREGHEEMVALLLSQGANI 465

Query: 401 HETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
           +  T+E  E+ L+LAC  G+ E+A  L+   A+VE     G  TPLMEAA  G   +L  
Sbjct: 466 NAQTEETQETALTLACCGGFLEVADFLIKAGADVE----LGASTPLMEAAQEG-HLDL-- 518

Query: 460 SVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLL 519
                                   +L   + ++A T +T +TALT AC  G  DVAD LL
Sbjct: 519 ---------------------VRYLLESTSDVHAQT-QTGDTALTYACENGHTDVADLLL 556

Query: 520 KNGANIE---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENGHT 575
           + GA++E    G  TPLM+A + GHL  V++L+   A V+ +T   D T L+ AC  GH 
Sbjct: 557 QYGADLEHESEGGRTPLMKACRAGHLCTVQFLISKRADVNRQTTNNDHTPLSLACAGGHI 616

Query: 576 DVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSV 616
            V +LLL+  AN      DNSTMLIEAAKGGH  VVQLLLD+P S+
Sbjct: 617 AVVELLLAQSANPFHKLKDNSTMLIEAAKGGHTAVVQLLLDYPHSI 662

Source: Harpegnathos saltator

Species: Harpegnathos saltator

Genus: Harpegnathos

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|242019742|ref|XP_002430318.1| multiple ankyrin repeats single kh domain protein, putative [Pediculus humanus corporis] gi|212515433|gb|EEB17580.1| multiple ankyrin repeats single kh domain protein, putative [Pediculus humanus corporis]

 Score =  616 bits (1589), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 352/589 (59%), Positives = 408/589 (69%), Gaps = 82/589 (13%)

Query: 69  LMEAASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE--- 124
           L+EAA  G  KL+TGDGK LADPEVLRRLTSSVSCALDEAAAALTRMR ENPR Q E   
Sbjct: 112 LLEAA--GISKLSTGDGKQLADPEVLRRLTSSVSCALDEAAAALTRMRTENPRSQVELVP 169

Query: 125 -RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 183
            RSLV+AC+DGDV TV+KLLTEG+SVHETT+EGESLLSLACSAGY ELAQVLLAMHANVE
Sbjct: 170 TRSLVEACTDGDVSTVRKLLTEGKSVHETTEEGESLLSLACSAGYLELAQVLLAMHANVE 229

Query: 184 DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL 243
           DRG+KG+CTPLMEAAS+G  +IV+LLINHGA+VN QSSSGNTPLMYACAGGHEAVVRVLL
Sbjct: 230 DRGVKGDCTPLMEAASAGHPDIVKLLINHGAEVNAQSSSGNTPLMYACAGGHEAVVRVLL 289

Query: 244 ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHL 303
           E  ANVEDHNENGHTPLMEAASAGHVGVAKILL++GAGINTHSNEFKESALTLACYKGHL
Sbjct: 290 ENEANVEDHNENGHTPLMEAASAGHVGVAKILLDHGAGINTHSNEFKESALTLACYKGHL 349

Query: 304 DMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDK 363
           DMVRFLL AGADQEHKTDEMHTALMEASMDGHVEVA+LLLDSGAQ           P D 
Sbjct: 350 DMVRFLLEAGADQEHKTDEMHTALMEASMDGHVEVARLLLDSGAQV--------NMPTDS 401

Query: 364 CERPSSIS--------------------------YTYSRSLVQACSDGDVKTVKKLLTEG 397
            E P +++                          YT    L++A  +G  + V  LL++G
Sbjct: 402 FESPLTLAACGGHTELALLLIERGANIEEVNDEGYT---PLMEAAREGHEEMVALLLSQG 458

Query: 398 RSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCN 456
            +++  T+E  E+ L+LAC  G+ E+A  LL   A++E     G  TPLMEAA  G    
Sbjct: 459 ANINAQTEETQETALTLACCGGFLEVADFLLKAGADLE----LGASTPLMEAAQEG-HLE 513

Query: 457 LNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVAD 516
           L   +  Y                        A +NA T +T +TALT AC  G  +VA 
Sbjct: 514 LVRYLLEYYH----------------------ANVNAQT-QTGDTALTYACENGHTEVAT 550

Query: 517 FLLKNGANIE---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACEN 572
            LL  GA +E    G  TPLM+A + GH + V++L+   A V+  T   D T L+ A   
Sbjct: 551 LLLMYGAELEHESEGGRTPLMKACRAGHQQTVQFLISKNADVNKTTTNNDHTPLSLAAAG 610

Query: 573 GHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSV 616
           GH  V +LLL++ A+      DNST+LIEAAKGGH NVV LLLD+P S+
Sbjct: 611 GHIGVVELLLAHHADPFHKLKDNSTILIEAAKGGHTNVVHLLLDYPHSI 659

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|307186886|gb|EFN72287.1| Ankyrin repeat domain-containing protein 17 [Camponotus floridanus]

 Score =  616 bits (1588), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 355/600 (59%), Positives = 415/600 (69%), Gaps = 84/600 (14%)

Query: 69  LMEAASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNENPR-PQNERS 126
           L+EAA  G GKL++GDGK LAD EVLRRLTSSVSCALDEAAAALTRMR++NPR P  +RS
Sbjct: 120 LLEAA--GIGKLSSGDGKHLADHEVLRRLTSSVSCALDEAAAALTRMRSDNPRTPNEKRS 177

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           LV+AC+DGDV TV+KLLTEGRSVHETT+EGESLLSLACSAGYYELAQVLLAM+ANVEDRG
Sbjct: 178 LVEACTDGDVGTVRKLLTEGRSVHETTEEGESLLSLACSAGYYELAQVLLAMNANVEDRG 237

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
           IKG+CTPLMEAAS+G ++IV LLI HGADVN QS+SGNTPLMY CAGGHE VVRVLLE G
Sbjct: 238 IKGDCTPLMEAASAGHVDIVSLLIAHGADVNAQSTSGNTPLMYGCAGGHEEVVRVLLEAG 297

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
           ANVEDHNENGHTPLMEAASAGHV VAKILLE+GAGINTHSNEFKESALTLACYKGHL+MV
Sbjct: 298 ANVEDHNENGHTPLMEAASAGHVQVAKILLEHGAGINTHSNEFKESALTLACYKGHLEMV 357

Query: 307 RFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCER 366
           RFLL AGADQEHKTDEMHTALMEASMDGHVEVA+LLLDSGAQ           P D  E 
Sbjct: 358 RFLLEAGADQEHKTDEMHTALMEASMDGHVEVARLLLDSGAQV--------NMPTDSFES 409

Query: 367 PSSIS--------------------------YTYSRSLVQACSDGDVKTVKKLLTEGRSV 400
           P +++                          YT    L++A  +G  + V  LL++G ++
Sbjct: 410 PLTLAACGGHVDLAMLLIERGANIEEVNDEGYT---PLMEAAREGHEEMVALLLSQGANI 466

Query: 401 HETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
           +  T+E  E+ L+LAC  G+ E+A  L+   A++E     G  TPLMEAA  G   +L  
Sbjct: 467 NAQTEETQETALTLACCGGFLEVADFLIKAGADIE----LGASTPLMEAAQEG-HIDL-- 519

Query: 460 SVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLL 519
                                   +L   A ++A T +T +TALT AC  G  DVAD LL
Sbjct: 520 ---------------------VRYLLESAADVHAQT-QTGDTALTYACENGHTDVADLLL 557

Query: 520 KNGANIE---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENGHT 575
           + GA++E    G  TPLM+A + GHL  V++L+   A V+ +T   D T L+ AC  GH 
Sbjct: 558 QFGADLEHESEGGRTPLMKACRAGHLCTVQFLITKRADVNRQTTNNDHTPLSLACAGGHL 617

Query: 576 DVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYA 630
            V + LL+  AN      DNSTMLIEAAKGGH  VVQLLLD+P      T   D +LT A
Sbjct: 618 AVVETLLTNSANPFHKLKDNSTMLIEAAKGGHTAVVQLLLDYPH----MTMMPDMSLTSA 673

Source: Camponotus floridanus

Species: Camponotus floridanus

Genus: Camponotus

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332022374|gb|EGI62686.1| Ankyrin repeat and KH domain-containing protein 1 [Acromyrmex echinatior]

 Score =  615 bits (1585), Expect = e-173,   Method: Compositional matrix adjust.
 Identities = 354/600 (59%), Positives = 414/600 (69%), Gaps = 84/600 (14%)

Query: 69  LMEAASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNENPR-PQNERS 126
           L+EAA  G GKL++GDGK L D EVLRRLTSSVSCALDEAAAALTRMR++NPR P  +RS
Sbjct: 127 LLEAA--GIGKLSSGDGKHLPDHEVLRRLTSSVSCALDEAAAALTRMRSDNPRTPNEKRS 184

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           LV+AC+DGDV TV+KLLTEGRSVHETT+EGESLLSLACSAGYYELAQVLLAM+ANVEDRG
Sbjct: 185 LVEACTDGDVGTVRKLLTEGRSVHETTEEGESLLSLACSAGYYELAQVLLAMNANVEDRG 244

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
           IKG+CTPLMEAAS+G ++IV LLI HGADVN QS+SGNTPLMY CAGGHE VVRVLL  G
Sbjct: 245 IKGDCTPLMEAASAGHVDIVSLLIAHGADVNAQSTSGNTPLMYGCAGGHEEVVRVLLNSG 304

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
           ANVEDHNENGHTPLMEAASAGHV VAKILLE+GAGINTHSNEFKESALTLACYKGHL+MV
Sbjct: 305 ANVEDHNENGHTPLMEAASAGHVPVAKILLEHGAGINTHSNEFKESALTLACYKGHLEMV 364

Query: 307 RFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCER 366
           RFLL AGADQEHKTDEMHTALMEASMDGHVEVA+LLLDSGAQ           P D  E 
Sbjct: 365 RFLLEAGADQEHKTDEMHTALMEASMDGHVEVARLLLDSGAQV--------NMPTDSFES 416

Query: 367 PSSIS--------------------------YTYSRSLVQACSDGDVKTVKKLLTEGRSV 400
           P +++                          YT    L++A  +G  + V  LL++G ++
Sbjct: 417 PLTLAACGGHVDLAMLLIERGANIEEVNDEGYT---PLMEAAREGHEEMVALLLSQGANI 473

Query: 401 HETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
           +  T+E  E+ L+LAC  G+ E+A  L+   A++E     G  TPLMEAA  G   +L  
Sbjct: 474 NAQTEETQETALTLACCGGFLEVADFLIKAGADIE----LGASTPLMEAAQEG-HLDL-- 526

Query: 460 SVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLL 519
                                   +L   A ++A T +T +TALT AC  G  DVAD LL
Sbjct: 527 ---------------------VRYLLESAADVHAQT-QTGDTALTYACENGHTDVADLLL 564

Query: 520 KNGANIE---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENGHT 575
           + GA++E    G  TPLM+A + GHL  V++L+   A V+ +T   D T L+ AC  GH 
Sbjct: 565 QFGADLEHESEGGRTPLMKACRAGHLCTVQFLISKRADVNRQTTNNDHTPLSLACAGGHL 624

Query: 576 DVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYA 630
            V +LLL+  AN      DNSTMLIEAAKGGH  VVQLLLD+P      T   D +LT A
Sbjct: 625 AVVELLLAQSANPFHKLKDNSTMLIEAAKGGHTPVVQLLLDYPH----MTMMPDMSLTSA 680

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|189234573|ref|XP_974489.2| PREDICTED: similar to Ankyrin repeat domain-containing protein 17 (Gene trap ankyrin repeat protein) (Serologically defined breast cancer antigen NY-BR-16) [Tribolium castaneum]

 Score =  612 bits (1579), Expect = e-172,   Method: Compositional matrix adjust.
 Identities = 348/600 (58%), Positives = 409/600 (68%), Gaps = 81/600 (13%)

Query: 58  EDRGIKGECTPLMEA--ASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRM 114
           EDR +  E    +EA   ++G  +LA  DGK LADPEVLRRLTSSVSCALDEAAAALTRM
Sbjct: 91  EDRAVDPETQARLEALLQAAGISQLAAKDGKHLADPEVLRRLTSSVSCALDEAAAALTRM 150

Query: 115 RNENPRPQNER-SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQ 173
           R++NPR Q E+ SLV+AC+DGDV TV+KLLTEGRSVHET++EGESLLSLACSAGYYELAQ
Sbjct: 151 RSDNPRTQPEKISLVEACTDGDVGTVRKLLTEGRSVHETSEEGESLLSLACSAGYYELAQ 210

Query: 174 VLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAG 233
           VLLAMHANVEDRGIKGECTPLMEAAS+G ++IV+LL+ HGADVN QS+SGNTPLMY CAG
Sbjct: 211 VLLAMHANVEDRGIKGECTPLMEAASAGHLDIVKLLVKHGADVNAQSTSGNTPLMYGCAG 270

Query: 234 GHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESA 293
           GH  VV  LLE GANVEDHNENGHTPLMEAASAGHV +AKILL+ GAGINTHSNEFKESA
Sbjct: 271 GHTKVVEFLLEHGANVEDHNENGHTPLMEAASAGHVDLAKILLKRGAGINTHSNEFKESA 330

Query: 294 LTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAY 353
           LTLACYKGHL+MVRFLL AGADQEHKTDEMHTALMEASMDGHVEVA+LLLDSGAQ     
Sbjct: 331 LTLACYKGHLEMVRFLLEAGADQEHKTDEMHTALMEASMDGHVEVARLLLDSGAQV---- 386

Query: 354 ARHDFFPNDKCERPSSIS--------------------------YTYSRSLVQACSDGDV 387
                 P D  E P +++                          YT    L++A  +G  
Sbjct: 387 ----NMPTDSFESPLTLAACGGHVDLAMLLIERGANIEEVNDEGYT---PLMEAAREGHE 439

Query: 388 KTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM 446
           + V  LL +G +++  TDE  E+ L+LAC  G+ E+A +LL   A++E     G  TPLM
Sbjct: 440 EMVHLLLGQGANINAQTDETQETALTLACCGGFTEVADILLKGGADIE----LGASTPLM 495

Query: 447 EAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLA 506
           E                                    +L   A ++A T +T +TALT A
Sbjct: 496 EXXXXHLDL-------------------------VKFLLENDANVHAQT-QTGDTALTYA 529

Query: 507 CCGGFLDVADFLLKNGANIE---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD 563
           C  G  DVAD LL+ GA++E    G  TPLM+A + GHL  V++L+  GA V  +T   D
Sbjct: 530 CENGHTDVADLLLQYGADLEHESEGGRTPLMKACRAGHLCTVQFLISKGANVRRQTTNND 589

Query: 564 -TALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVH 617
            T L+ AC  GH  V +LLLS+ A+      DNSTMLIEAAKGGH NVVQLLLD+P S+ 
Sbjct: 590 HTPLSLACAGGHLAVVELLLSHNADPCHKLKDNSTMLIEAAKGGHTNVVQLLLDYPHSMQ 649

Source: Tribolium castaneum

Species: Tribolium castaneum

Genus: Tribolium

Family: Tenebrionidae

Order: Coleoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|126330668|ref|XP_001364787.1| PREDICTED: ankyrin repeat domain-containing protein 17 isoform 2 [Monodelphis domestica]

 Score =  577 bits (1488), Expect = e-162,   Method: Compositional matrix adjust.
 Identities = 362/729 (49%), Positives = 452/729 (62%), Gaps = 104/729 (14%)

Query: 69  LMEAASSGFGKLATGDGK-LADPEVLRRLTSSVSCALDEAAAALTRMRNENPR---PQNE 124
           L+EAA  G GKL+T DGK  ADPEVLRRLTSSVSCALDEAAAALTRMR E+     P + 
Sbjct: 178 LLEAA--GIGKLSTADGKAFADPEVLRRLTSSVSCALDEAAAALTRMRAESTASAGPTDN 235

Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184
           RSL +ACS+GDV  V+KLL EGRSV+E T+EGESLL LACSAGYYELAQVLLAMHANVED
Sbjct: 236 RSLAEACSEGDVNAVRKLLIEGRSVNEHTEEGESLLCLACSAGYYELAQVLLAMHANVED 295

Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
           RGIKG+ TPLM AA+ G ++IV+LL+ HGADVN QSS+GNT L YACAGG+  VV+VLLE
Sbjct: 296 RGIKGDITPLMAAANGGHVKIVKLLLAHGADVNAQSSTGNTALTYACAGGYVDVVKVLLE 355

Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD 304
            GA++EDHNENGHTPLMEA SAGHV VA++LLE GAGINTHSNEFKESALTLACYKGHL+
Sbjct: 356 SGASIEDHNENGHTPLMEAGSAGHVEVARLLLENGAGINTHSNEFKESALTLACYKGHLE 415

Query: 305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKC 364
           MVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA+LLLDSGAQ           P D  
Sbjct: 416 MVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVARLLLDSGAQV--------NMPADSF 467

Query: 365 ERPSSIS--------------------------YTYSRSLVQACSDGDVKTVKKLLTEGR 398
           E P +++                          YT    L++A  +G  + V  LL +G 
Sbjct: 468 ESPLTLAACGGHVELAALLIERGANLEEVNDEGYT---PLMEAAREGHEEMVALLLGQGA 524

Query: 399 SVHETTDEG-ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNL 457
           +++  T+E  E+ L+LAC  G+ E+A  L+   A++E     G  TPLMEAA  G     
Sbjct: 525 NINAQTEETQETALTLACCGGFLEVADFLIKAGADIE----LGCSTPLMEAAQEGHL--- 577

Query: 458 NESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADF 517
              +  Y                   +L  GA ++A T  T +TALT AC  G  DVAD 
Sbjct: 578 --ELVKY-------------------LLAAGANVHA-TTATGDTALTYACENGHTDVADV 615

Query: 518 LLKNGANIE---LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENG 573
           LL+ GA++E    G  TPLM+AA+ GH+  V++L+  GA V+  T   D T L+ AC  G
Sbjct: 616 LLQAGADLEHESEGGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLACAGG 675

Query: 574 HTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H  V +LLL++GA+      D STMLIEAAKGGH +VV  LLD+P ++ +      T LT
Sbjct: 676 HLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLSAPPPDVTQLT 735

Query: 629 YACEN----GHTDVADLLLSYGANLDN-------STMLIEA-AKGGHANVVQLLLDFPRS 676
               +        V  L +       +       +T+ I + A  G A+ +    + P  
Sbjct: 736 PPSHDLNRAPRVPVQALPMVVPPQEPDKPPATVAATLPIRSKAVSGRASAMS---NTPTH 792

Query: 677 VIGGSLSSPSDDSSSHLCSQGKKSGVH------AKTQTG-DTALTYACENGHTDVADLLL 729
            I  S+S P   + S + S      ++      A+T++  DTALT AC  GH ++   LL
Sbjct: 793 SISASISQPQTPTPSPIISPSAMLPIYPAIDIDAQTESNHDTALTLACAGGHEELVQTLL 852

Query: 730 SYGANLRNR 738
             GA++ +R
Sbjct: 853 ERGASIEHR 861

Source: Monodelphis domestica

Species: Monodelphis domestica

Genus: Monodelphis

Family: Didelphidae

Order: Didelphimorphia

Class: Mammalia

Phylum: Chordata

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	739
UNIPROTKB|E1BVC6	1330	Gga.53476 "Uncharacterized pro	0.763	0.424	0.535	7.1e-154
UNIPROTKB|E9PDP5	1565	ANKHD1 "Ankyrin repeat and KH	0.543	0.256	0.596	1.6e-151
UNIPROTKB|F6XJV3	2539	ANKHD1 "Uncharacterized protei	0.769	0.224	0.534	5.3e-151
UNIPROTKB|E2QVL1	2616	ANKHD1 "Uncharacterized protei	0.769	0.217	0.534	6.7e-151
UNIPROTKB|F1RGE8	2540	ANKHD1 "Uncharacterized protei	0.763	0.222	0.538	1.1e-150
UNIPROTKB|F1LRM8	2341	Ankrd17 "Protein Ankrd17" [Rat	0.763	0.240	0.537	1.5e-150
UNIPROTKB|D4A0B4	2358	Ankrd17 "Similar to ankyrin re	0.763	0.239	0.537	1.6e-150
UNIPROTKB|I3LSK0	2222	ANKRD17 "Uncharacterized prote	0.763	0.253	0.535	1.8e-150
UNIPROTKB|G5E964	2352	ANKRD17 "Ankyrin repeat domain	0.763	0.239	0.535	3.4e-150
UNIPROTKB|F1LQP1	2592	Ankrd17 "Protein Ankrd17" [Rat	0.763	0.217	0.537	3.6e-150

UNIPROTKB|E1BVC6 Gga.53476 "Uncharacterized protein" [Gallus gallus (taxid:9031)]

 Score = 1392 (495.1 bits), Expect = 7.1e-154, Sum P(2) = 7.1e-154
 Identities = 323/603 (53%), Positives = 396/603 (65%)

Query:    47 AQVLLAMHANVED-RGIKGECTPLMEAA--SSGFGKLATGDGK-LADPEVLRRLTSSVSC 102
             +++LL+  A+  D R +  E    +EA   ++G GKL+T DGK  ADPEVLRRLTSSVSC
Sbjct:     6 SKLLLSSTADGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSC 65

Query:   103 ALDEAAAALTRMRNE---NPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159
             ALDEAAAALTRMR E   N    + RSL +ACS+GDV  V+KLL EGRSV+E T+EGESL
Sbjct:    66 ALDEAAAALTRMRAESTANAGQTDNRSLAEACSEGDVNAVRKLLIEGRSVNEHTEEGESL 125

Query:   160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
             L LACSAGYYELAQVLLAMHANVEDRGIKG+ TPLM AA+ G ++IV+LL+ HGADVN Q
Sbjct:   126 LCLACSAGYYELAQVLLAMHANVEDRGIKGDITPLMAAANGGHVKIVKLLLAHGADVNAQ 185

Query:   220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             SS+GNT L YACAGG+  VV+VLLE GA++EDHNENGHTPLMEA SAGHV VA++LLE G
Sbjct:   186 SSTGNTALTYACAGGYVDVVKVLLESGASIEDHNENGHTPLMEAGSAGHVEVARVLLENG 245

Query:   280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339
             AGINTHSNEFKESALTLACYKGHL+MVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA
Sbjct:   246 AGINTHSNEFKESALTLACYKGHLEMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVA 305

Query:   340 KLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRS 399
             +LLLDSGAQ V+        P D  E P +++         AC  G V+    L+  G +
Sbjct:   306 RLLLDSGAQ-VN-------MPADSFESPLTLA---------ACG-GHVELAALLIERGAN 347

Query:   400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
             + E  DEG + L  A   G+ E+  +LL   AN+  +  + + T L  A   G     + 
Sbjct:   348 LEEVNDEGYTPLMEAAREGHEEMVALLLGQGANINAQTEETQETALTLACCGGFLEVADF 407

Query:   460 SVSAYARHDFFPNDKSVNGLQAS----VILIPGAKINAHXXXXXXXXXXXXCC-GGFLDV 514
              + A A  +   +   +   Q      V  +  A  N H             C  G  DV
Sbjct:   408 LIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDV 467

Query:   515 ADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYAC 570
             AD LL+ GA++E    G  TPLM+AA+ GH+  V++L+  GA V+  T   D T L+ AC
Sbjct:   468 ADVLLQAGADLEHESEGGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLAC 527

Query:   571 ENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDT 625
               GH  V +LLL++GA+      D STMLIEAAKGGH +VV  LLD+P ++ +      T
Sbjct:   528 AGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLSAPPPDAT 587

Query:   626 ALT 628
              LT
Sbjct:   588 QLT 590

GO:0001955 "blood vessel maturation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0051151 "negative regulation of smooth muscle cell differentiation" evidence=IEA

UNIPROTKB|E9PDP5 ANKHD1 "Ankyrin repeat and KH domain-containing protein 1" [Homo sapiens (taxid:9606)]

 Score = 1174 (418.3 bits), Expect = 1.6e-151, Sum P(3) = 1.6e-151
 Identities = 256/429 (59%), Positives = 311/429 (72%)

Query:    47 AQVLLAMHANVED-RGIKGECTPLMEAA--SSGFGKLATGDGK-LADPEVLRRLTSSVSC 102
             +++ L+  A   D R +  E    +EA   ++G GKL+T DGK  ADPEVLRRLTSSVSC
Sbjct:   122 SEIFLSSTAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSC 181

Query:   103 ALDEAAAALTRMRNENPRPQNE---RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159
             ALDEAAAALTRM+ EN     +   RSL +ACSDGDV  V+KLL EGRSV+E T+EGESL
Sbjct:   182 ALDEAAAALTRMKAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESL 241

Query:   160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
             L LACSAGYYELAQVLLAMHANVEDRG KG+ TPLM A+S G+++IV+LL+ H ADVN Q
Sbjct:   242 LCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQ 301

Query:   220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             S++GNT L YACAGG   +V+VLL  GAN+EDHNENGHTPLMEAASAGHV VA++LL++G
Sbjct:   302 SATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHG 361

Query:   280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339
             AGINTHSNEFKESALTLACYKGHLDMVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA
Sbjct:   362 AGINTHSNEFKESALTLACYKGHLDMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVA 421

Query:   340 KLLLDSGAQ------------SVSAYARHDFFPNDKCERPSSISYTYSRS---LVQACSD 384
             +LLLDSGAQ            +++A   H        ER +++          L++A  +
Sbjct:   422 RLLLDSGAQVNMPADSFESPLTLAACGGHVELAALLIERGANLEEVNDEGYTPLMEAARE 481

Query:   385 GDVKTVKKLLTEGRSVHETTDEG-ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECT 443
             G  + V  LL +G +++  T+E  E+ L+LAC  G+ E+A  L+   A++E     G  T
Sbjct:   482 GHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADFLIKAGADIE----LGCST 537

Query:   444 PLMEAASSG 452
             PLMEA+  G
Sbjct:   538 PLMEASQEG 546

GO:0005737 "cytoplasm" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0005730 "nucleolus" evidence=IDA

UNIPROTKB|F6XJV3 ANKHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1404 (499.3 bits), Expect = 5.3e-151, Sum P(2) = 5.3e-151
 Identities = 325/608 (53%), Positives = 399/608 (65%)

Query:    47 AQVLLAMHANVED-RGIKGECTPLMEAA--SSGFGKLATGDGK-LADPEVLRRLTSSVSC 102
             +++ L+  A   D R +  E    +EA   ++G GKL+T DGK  ADPEVLRRLTSSVSC
Sbjct:   117 SEIFLSSTAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSC 176

Query:   103 ALDEAAAALTRMRNENPRPQNE---RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159
             ALDEAAAALTRMR EN     +   RSL +ACSDGDV  V+KLL EGRSV+E T+EGESL
Sbjct:   177 ALDEAAAALTRMRAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESL 236

Query:   160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
             L LACSAGYYELAQVLLAMHANVEDRG KG+ TPLM A+S G+++IV+LL+ H ADVN Q
Sbjct:   237 LCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQ 296

Query:   220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             S++GNT L YACAGG   +V+VLL  GAN+EDHNENGHTPLMEAASAGHV VA++LL++G
Sbjct:   297 SATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHG 356

Query:   280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339
             AGINTHSNEFKESALTLACYKGHLDMVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA
Sbjct:   357 AGINTHSNEFKESALTLACYKGHLDMVRFLLDAGADQEHKTDEMHTALMEACMDGHVEVA 416

Query:   340 KLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRS 399
             +LLLDSGAQ V+        P D  E P +++         AC  G V+    L+  G +
Sbjct:   417 RLLLDSGAQ-VN-------MPADSFESPLTLA---------ACG-GHVELAALLIERGAN 458

Query:   400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
             + E  DEG + L  A   G+ E+  +LLA  AN+  +  + + T L  A   G     + 
Sbjct:   459 LEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADF 518

Query:   460 SVSAYARHDF---FP-NDKSVNGLQASVILIPGAKINAHXXXXXXXXXXXXCC-GGFLDV 514
              + A A  +     P  + S  G    V  +  A  N H             C  G  DV
Sbjct:   519 LIKAGADIELGCSTPLMEASQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDV 578

Query:   515 ADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYAC 570
             AD LL+ GA++E    G  TPLM+AA+ GHL  V++L+  GA V+  T   D T ++ AC
Sbjct:   579 ADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLAC 638

Query:   571 ENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDT 625
               GH  V +LLL++GA+      D STMLIEAAKGGH NVV  LLD+P +V +   T  +
Sbjct:   639 AGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPTTDVS 698

Query:   626 ALTYACEN 633
              LT + ++
Sbjct:   699 QLTSSSQD 706

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|E2QVL1 ANKHD1 "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 1404 (499.3 bits), Expect = 6.7e-151, Sum P(2) = 6.7e-151
 Identities = 325/608 (53%), Positives = 399/608 (65%)

Query:    47 AQVLLAMHANVED-RGIKGECTPLMEAA--SSGFGKLATGDGK-LADPEVLRRLTSSVSC 102
             +++ L+  A   D R +  E    +EA   ++G GKL+T DGK  ADPEVLRRLTSSVSC
Sbjct:   117 SEIFLSSTAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSC 176

Query:   103 ALDEAAAALTRMRNENPRPQNE---RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159
             ALDEAAAALTRMR EN     +   RSL +ACSDGDV  V+KLL EGRSV+E T+EGESL
Sbjct:   177 ALDEAAAALTRMRAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESL 236

Query:   160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
             L LACSAGYYELAQVLLAMHANVEDRG KG+ TPLM A+S G+++IV+LL+ H ADVN Q
Sbjct:   237 LCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQ 296

Query:   220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             S++GNT L YACAGG   +V+VLL  GAN+EDHNENGHTPLMEAASAGHV VA++LL++G
Sbjct:   297 SATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHG 356

Query:   280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339
             AGINTHSNEFKESALTLACYKGHLDMVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA
Sbjct:   357 AGINTHSNEFKESALTLACYKGHLDMVRFLLDAGADQEHKTDEMHTALMEACMDGHVEVA 416

Query:   340 KLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRS 399
             +LLLDSGAQ V+        P D  E P +++         AC  G V+    L+  G +
Sbjct:   417 RLLLDSGAQ-VN-------MPADSFESPLTLA---------ACG-GHVELAALLIERGAN 458

Query:   400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
             + E  DEG + L  A   G+ E+  +LLA  AN+  +  + + T L  A   G     + 
Sbjct:   459 LEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFSEVADF 518

Query:   460 SVSAYARHDF---FP-NDKSVNGLQASVILIPGAKINAHXXXXXXXXXXXXCC-GGFLDV 514
              + A A  +     P  + S  G    V  +  A  N H             C  G  DV
Sbjct:   519 LIKAGADIELGCSTPLMEASQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDV 578

Query:   515 ADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYAC 570
             AD LL+ GA++E    G  TPLM+AA+ GHL  V++L+  GA V+  T   D T ++ AC
Sbjct:   579 ADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLAC 638

Query:   571 ENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDT 625
               GH  V +LLL++GA+      D STMLIEAAKGGH NVV  LLD+P +V +   T  +
Sbjct:   639 AGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPTTDVS 698

Query:   626 ALTYACEN 633
              LT + ++
Sbjct:   699 QLTSSSQD 706

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|F1RGE8 ANKHD1 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1401 (498.2 bits), Expect = 1.1e-150, Sum P(2) = 1.1e-150
 Identities = 325/603 (53%), Positives = 396/603 (65%)

Query:    47 AQVLLAMHANVED-RGIKGECTPLMEAA--SSGFGKLATGDGK-LADPEVLRRLTSSVSC 102
             +++ L+  A   D R +  E    +EA   ++G GKL+T DGK  ADPEVLRRLTSSVSC
Sbjct:   117 SEIFLSSTAEGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSC 176

Query:   103 ALDEAAAALTRMRNENPRPQNE---RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159
             ALDEAAAALTRMR EN     +   RSL +ACSDGDV  V+KLL EGRSV+E T+EGESL
Sbjct:   177 ALDEAAAALTRMRAENSHNAGQVDTRSLAEACSDGDVNAVRKLLDEGRSVNEHTEEGESL 236

Query:   160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
             L LACSAGYYELAQVLLAMHANVEDRG KG+ TPLM A+S G+++IV+LL+ H ADVN Q
Sbjct:   237 LCLACSAGYYELAQVLLAMHANVEDRGNKGDITPLMAASSGGYLDIVKLLLLHDADVNSQ 296

Query:   220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             S++GNT L YACAGG   +V+VLL  GAN+EDHNENGHTPLMEAASAGHV VA++LL++G
Sbjct:   297 SATGNTALTYACAGGFVDIVKVLLNEGANIEDHNENGHTPLMEAASAGHVEVARVLLDHG 356

Query:   280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339
             AGINTHSNEFKESALTLACYKGHLDMVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA
Sbjct:   357 AGINTHSNEFKESALTLACYKGHLDMVRFLLDAGADQEHKTDEMHTALMEARMDGHVEVA 416

Query:   340 KLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRS 399
             +LLLDSGAQ V+        P D  E P +++         AC  G V+    L+  G +
Sbjct:   417 RLLLDSGAQ-VN-------MPADSFESPLTLA---------ACG-GHVELAALLIERGAN 458

Query:   400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
             + E  DEG + L  A   G+ E+  +LLA  AN+  +  + + T L  A   G     + 
Sbjct:   459 LEEVNDEGYTPLMEAAREGHEEMVALLLAQGANINAQTEETQETALTLACCGGFAEVADF 518

Query:   460 SVSAYARHDF---FP-NDKSVNGLQASVILIPGAKINAHXXXXXXXXXXXXCC-GGFLDV 514
              + A A  +     P  + S  G    V  +  A  N H             C  G  DV
Sbjct:   519 LIKAGADIELGCSTPLMEASQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDV 578

Query:   515 ADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYAC 570
             AD LL+ GA++E    G  TPLM+AA+ GHL  V++L+  GA V+  T   D T ++ AC
Sbjct:   579 ADVLLQAGADLEHESEGGRTPLMKAARAGHLCTVQFLISKGANVNRATANNDHTVVSLAC 638

Query:   571 ENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDT 625
               GH  V +LLL++GA+      D STMLIEAAKGGH NVV  LLD+P +V +   T  +
Sbjct:   639 AGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTNVVSYLLDYPNNVLSVPTTEVS 698

Query:   626 ALT 628
              LT
Sbjct:   699 QLT 701

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|F1LRM8 Ankrd17 "Protein Ankrd17" [Rattus norvegicus (taxid:10116)]

 Score = 1387 (493.3 bits), Expect = 1.5e-150, Sum P(2) = 1.5e-150
 Identities = 324/603 (53%), Positives = 395/603 (65%)

Query:    47 AQVLLAMHANVED-RGIKGECTPLMEAA--SSGFGKLATGDGK-LADPEVLRRLTSSVSC 102
             +++LL+  A+  D R +  E    +EA   ++G GKL+T DGK  ADPEVLRRLTSSVSC
Sbjct:   136 SKLLLSGTADGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSC 195

Query:   103 ALDEAAAALTRMRNE---NPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159
             ALDEAAAALTRMR E   N    + RSL +ACS+GDV  V+KLL EGRSV+E T+EGESL
Sbjct:   196 ALDEAAAALTRMRAESTANAGQSDNRSLAEACSEGDVNAVRKLLIEGRSVNEHTEEGESL 255

Query:   160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
             L LACSAGYYELAQVLLAMHANVEDRGIKG+ TPLM AA+ G ++IV+LL+ H ADVN Q
Sbjct:   256 LCLACSAGYYELAQVLLAMHANVEDRGIKGDITPLMAAANGGHVKIVKLLLAHKADVNAQ 315

Query:   220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             SS+GNT L YACAGG+  VV+VLLE GA++EDHNENGHTPLMEA SAGHV VA++LLE G
Sbjct:   316 SSTGNTALTYACAGGYVDVVKVLLESGASIEDHNENGHTPLMEAGSAGHVEVARLLLENG 375

Query:   280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339
             AGINTHSNEFKESALTLACYKGHL+MVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA
Sbjct:   376 AGINTHSNEFKESALTLACYKGHLEMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVA 435

Query:   340 KLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRS 399
             +LLLDSGAQ V+        P D  E P +++         AC  G V+    L+  G S
Sbjct:   436 RLLLDSGAQ-VN-------MPADSFESPLTLA---------ACG-GHVELAALLIERGAS 477

Query:   400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
             + E  DEG + L  A   G+ E+  +LL   AN+  +  + + T L  A   G     + 
Sbjct:   478 LEEVNDEGYTPLMEAAREGHEEMVALLLGQGANINAQTEETQETALTLACCGGFLEVADF 537

Query:   460 SVSAYARHDFFPNDKSVNGLQAS----VILIPGAKINAHXXXXXXXXXXXXCC-GGFLDV 514
              + A A  +   +   +   Q      V  +  A  N H             C  G  DV
Sbjct:   538 LIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDV 597

Query:   515 ADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYAC 570
             AD LL+ GA++E    G  TPLM+AA+ GH+  V++L+  GA V+  T   D T L+ AC
Sbjct:   598 ADVLLQAGADLEHESEGGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLAC 657

Query:   571 ENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDT 625
               GH  V +LLL++GA+      D STMLIEAAKGGH +VV  LLD+P ++ A      T
Sbjct:   658 AGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLAAPPPDVT 717

Query:   626 ALT 628
              LT
Sbjct:   718 QLT 720

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|D4A0B4 Ankrd17 "Similar to ankyrin repeat domain protein 17 isoform b (Predicted), isoform CRA_a" [Rattus norvegicus (taxid:10116)]

 Score = 1387 (493.3 bits), Expect = 1.6e-150, Sum P(2) = 1.6e-150
 Identities = 324/603 (53%), Positives = 395/603 (65%)

Query:    47 AQVLLAMHANVED-RGIKGECTPLMEAA--SSGFGKLATGDGK-LADPEVLRRLTSSVSC 102
             +++LL+  A+  D R +  E    +EA   ++G GKL+T DGK  ADPEVLRRLTSSVSC
Sbjct:    38 SKLLLSGTADGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSC 97

Query:   103 ALDEAAAALTRMRNE---NPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159
             ALDEAAAALTRMR E   N    + RSL +ACS+GDV  V+KLL EGRSV+E T+EGESL
Sbjct:    98 ALDEAAAALTRMRAESTANAGQSDNRSLAEACSEGDVNAVRKLLIEGRSVNEHTEEGESL 157

Query:   160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
             L LACSAGYYELAQVLLAMHANVEDRGIKG+ TPLM AA+ G ++IV+LL+ H ADVN Q
Sbjct:   158 LCLACSAGYYELAQVLLAMHANVEDRGIKGDITPLMAAANGGHVKIVKLLLAHKADVNAQ 217

Query:   220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             SS+GNT L YACAGG+  VV+VLLE GA++EDHNENGHTPLMEA SAGHV VA++LLE G
Sbjct:   218 SSTGNTALTYACAGGYVDVVKVLLESGASIEDHNENGHTPLMEAGSAGHVEVARLLLENG 277

Query:   280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339
             AGINTHSNEFKESALTLACYKGHL+MVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA
Sbjct:   278 AGINTHSNEFKESALTLACYKGHLEMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVA 337

Query:   340 KLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRS 399
             +LLLDSGAQ V+        P D  E P +++         AC  G V+    L+  G S
Sbjct:   338 RLLLDSGAQ-VN-------MPADSFESPLTLA---------ACG-GHVELAALLIERGAS 379

Query:   400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
             + E  DEG + L  A   G+ E+  +LL   AN+  +  + + T L  A   G     + 
Sbjct:   380 LEEVNDEGYTPLMEAAREGHEEMVALLLGQGANINAQTEETQETALTLACCGGFLEVADF 439

Query:   460 SVSAYARHDFFPNDKSVNGLQAS----VILIPGAKINAHXXXXXXXXXXXXCC-GGFLDV 514
              + A A  +   +   +   Q      V  +  A  N H             C  G  DV
Sbjct:   440 LIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDV 499

Query:   515 ADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYAC 570
             AD LL+ GA++E    G  TPLM+AA+ GH+  V++L+  GA V+  T   D T L+ AC
Sbjct:   500 ADVLLQAGADLEHESEGGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLAC 559

Query:   571 ENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDT 625
               GH  V +LLL++GA+      D STMLIEAAKGGH +VV  LLD+P ++ A      T
Sbjct:   560 AGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLAAPPPDVT 619

Query:   626 ALT 628
              LT
Sbjct:   620 QLT 622

GO:0001955 "blood vessel maturation" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0051151 "negative regulation of smooth muscle cell differentiation" evidence=IEA

UNIPROTKB|I3LSK0 ANKRD17 "Uncharacterized protein" [Sus scrofa (taxid:9823)]

 Score = 1384 (492.3 bits), Expect = 1.8e-150, Sum P(2) = 1.8e-150
 Identities = 323/603 (53%), Positives = 395/603 (65%)

Query:    47 AQVLLAMHANVED-RGIKGECTPLMEAA--SSGFGKLATGDGK-LADPEVLRRLTSSVSC 102
             +++LL+  A+  D R +  E    +EA   ++G GKL+T DGK  ADPEVLRRLTSSVSC
Sbjct:    20 SKLLLSGTADGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSC 79

Query:   103 ALDEAAAALTRMRNE---NPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159
             ALDEAAAALTRMR E   N    + RSL +ACS+GDV  V+KLL EGRSV+E T+EGESL
Sbjct:    80 ALDEAAAALTRMRAESTANAGQSDNRSLAEACSEGDVNAVRKLLIEGRSVNEHTEEGESL 139

Query:   160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
             L LACSAGYYELAQVLLAMHANVEDRGIKG+ TPLM AA+ G ++IV+LL+ H ADVN Q
Sbjct:   140 LCLACSAGYYELAQVLLAMHANVEDRGIKGDITPLMAAANGGHVKIVKLLLAHKADVNAQ 199

Query:   220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             SS+GNT L YACAGG+  VV+VLLE GA++EDHNENGHTPLMEA SAGHV VA++LLE G
Sbjct:   200 SSTGNTALTYACAGGYVDVVKVLLESGASIEDHNENGHTPLMEAGSAGHVEVARLLLENG 259

Query:   280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339
             AGINTHSNEFKESALTLACYKGHL+MVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA
Sbjct:   260 AGINTHSNEFKESALTLACYKGHLEMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVA 319

Query:   340 KLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRS 399
             +LLLDSGAQ V+        P D  E P +++         AC  G V+    L+  G S
Sbjct:   320 RLLLDSGAQ-VN-------MPADSFESPLTLA---------ACG-GHVELAALLIERGAS 361

Query:   400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
             + E  DEG + L  A   G+ E+  +LL   AN+  +  + + T L  A   G     + 
Sbjct:   362 LEEVNDEGYTPLMEAAREGHEEMVALLLGQGANINAQTEETQETALTLACCGGFLEVADF 421

Query:   460 SVSAYARHDFFPNDKSVNGLQAS----VILIPGAKINAHXXXXXXXXXXXXCC-GGFLDV 514
              + A A  +   +   +   Q      V  +  A  N H             C  G  DV
Sbjct:   422 LIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDV 481

Query:   515 ADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYAC 570
             AD LL+ GA++E    G  TPLM+AA+ GH+  V++L+  GA V+  T   D T L+ AC
Sbjct:   482 ADVLLQAGADLEHESEGGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLAC 541

Query:   571 ENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDT 625
               GH  V +LLL++GA+      D STMLIEAAKGGH +VV  LLD+P ++ +      T
Sbjct:   542 AGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLSAPPPDVT 601

Query:   626 ALT 628
              LT
Sbjct:   602 QLT 604

GO:0051151 "negative regulation of smooth muscle cell differentiation" evidence=IEA

GO:0005737 "cytoplasm" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0001955 "blood vessel maturation" evidence=IEA

GO:0003723 "RNA binding" evidence=IEA

UNIPROTKB|G5E964 ANKRD17 "Ankyrin repeat domain 17, isoform CRA_b" [Homo sapiens (taxid:9606)]

 Score = 1384 (492.3 bits), Expect = 3.4e-150, Sum P(2) = 3.4e-150
 Identities = 323/603 (53%), Positives = 395/603 (65%)

Query:    47 AQVLLAMHANVED-RGIKGECTPLMEAA--SSGFGKLATGDGK-LADPEVLRRLTSSVSC 102
             +++LL+  A+  D R +  E    +EA   ++G GKL+T DGK  ADPEVLRRLTSSVSC
Sbjct:   151 SKLLLSGTADGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSC 210

Query:   103 ALDEAAAALTRMRNE---NPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159
             ALDEAAAALTRMR E   N    + RSL +ACS+GDV  V+KLL EGRSV+E T+EGESL
Sbjct:   211 ALDEAAAALTRMRAESTANAGQSDNRSLAEACSEGDVNAVRKLLIEGRSVNEHTEEGESL 270

Query:   160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
             L LACSAGYYELAQVLLAMHANVEDRGIKG+ TPLM AA+ G ++IV+LL+ H ADVN Q
Sbjct:   271 LCLACSAGYYELAQVLLAMHANVEDRGIKGDITPLMAAANGGHVKIVKLLLAHKADVNAQ 330

Query:   220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             SS+GNT L YACAGG+  VV+VLLE GA++EDHNENGHTPLMEA SAGHV VA++LLE G
Sbjct:   331 SSTGNTALTYACAGGYVDVVKVLLESGASIEDHNENGHTPLMEAGSAGHVEVARLLLENG 390

Query:   280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339
             AGINTHSNEFKESALTLACYKGHL+MVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA
Sbjct:   391 AGINTHSNEFKESALTLACYKGHLEMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVA 450

Query:   340 KLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRS 399
             +LLLDSGAQ V+        P D  E P +++         AC  G V+    L+  G S
Sbjct:   451 RLLLDSGAQ-VN-------MPADSFESPLTLA---------ACG-GHVELAALLIERGAS 492

Query:   400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
             + E  DEG + L  A   G+ E+  +LL   AN+  +  + + T L  A   G     + 
Sbjct:   493 LEEVNDEGYTPLMEAAREGHEEMVALLLGQGANINAQTEETQETALTLACCGGFLEVADF 552

Query:   460 SVSAYARHDFFPNDKSVNGLQAS----VILIPGAKINAHXXXXXXXXXXXXCC-GGFLDV 514
              + A A  +   +   +   Q      V  +  A  N H             C  G  DV
Sbjct:   553 LIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDV 612

Query:   515 ADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYAC 570
             AD LL+ GA++E    G  TPLM+AA+ GH+  V++L+  GA V+  T   D T L+ AC
Sbjct:   613 ADVLLQAGADLEHESEGGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLAC 672

Query:   571 ENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDT 625
               GH  V +LLL++GA+      D STMLIEAAKGGH +VV  LLD+P ++ +      T
Sbjct:   673 AGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLSAPPPDVT 732

Query:   626 ALT 628
              LT
Sbjct:   733 QLT 735

GO:0003723 "RNA binding" evidence=IEA

GO:0005737 "cytoplasm" evidence=IDA

UNIPROTKB|F1LQP1 Ankrd17 "Protein Ankrd17" [Rattus norvegicus (taxid:10116)]

 Score = 1387 (493.3 bits), Expect = 3.6e-150, Sum P(2) = 3.6e-150
 Identities = 324/603 (53%), Positives = 395/603 (65%)

Query:    47 AQVLLAMHANVED-RGIKGECTPLMEAA--SSGFGKLATGDGK-LADPEVLRRLTSSVSC 102
             +++LL+  A+  D R +  E    +EA   ++G GKL+T DGK  ADPEVLRRLTSSVSC
Sbjct:   136 SKLLLSGTADGADLRTVDPETQARLEALLEAAGIGKLSTADGKAFADPEVLRRLTSSVSC 195

Query:   103 ALDEAAAALTRMRNE---NPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 159
             ALDEAAAALTRMR E   N    + RSL +ACS+GDV  V+KLL EGRSV+E T+EGESL
Sbjct:   196 ALDEAAAALTRMRAESTANAGQSDNRSLAEACSEGDVNAVRKLLIEGRSVNEHTEEGESL 255

Query:   160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
             L LACSAGYYELAQVLLAMHANVEDRGIKG+ TPLM AA+ G ++IV+LL+ H ADVN Q
Sbjct:   256 LCLACSAGYYELAQVLLAMHANVEDRGIKGDITPLMAAANGGHVKIVKLLLAHKADVNAQ 315

Query:   220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             SS+GNT L YACAGG+  VV+VLLE GA++EDHNENGHTPLMEA SAGHV VA++LLE G
Sbjct:   316 SSTGNTALTYACAGGYVDVVKVLLESGASIEDHNENGHTPLMEAGSAGHVEVARLLLENG 375

Query:   280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339
             AGINTHSNEFKESALTLACYKGHL+MVRFLL AGADQEHKTDEMHTALMEA MDGHVEVA
Sbjct:   376 AGINTHSNEFKESALTLACYKGHLEMVRFLLEAGADQEHKTDEMHTALMEACMDGHVEVA 435

Query:   340 KLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRS 399
             +LLLDSGAQ V+        P D  E P +++         AC  G V+    L+  G S
Sbjct:   436 RLLLDSGAQ-VN-------MPADSFESPLTLA---------ACG-GHVELAALLIERGAS 477

Query:   400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
             + E  DEG + L  A   G+ E+  +LL   AN+  +  + + T L  A   G     + 
Sbjct:   478 LEEVNDEGYTPLMEAAREGHEEMVALLLGQGANINAQTEETQETALTLACCGGFLEVADF 537

Query:   460 SVSAYARHDFFPNDKSVNGLQAS----VILIPGAKINAHXXXXXXXXXXXXCC-GGFLDV 514
              + A A  +   +   +   Q      V  +  A  N H             C  G  DV
Sbjct:   538 LIKAGADIELGCSTPLMEAAQEGHLELVKYLLAAGANVHATTATGDTALTYACENGHTDV 597

Query:   515 ADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYAC 570
             AD LL+ GA++E    G  TPLM+AA+ GH+  V++L+  GA V+  T   D T L+ AC
Sbjct:   598 ADVLLQAGADLEHESEGGRTPLMKAARAGHVCTVQFLISKGANVNRTTANNDHTVLSLAC 657

Query:   571 ENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDT 625
               GH  V +LLL++GA+      D STMLIEAAKGGH +VV  LLD+P ++ A      T
Sbjct:   658 AGGHLAVVELLLAHGADPTHRLKDGSTMLIEAAKGGHTSVVCYLLDYPNNLLAAPPPDVT 717

Query:   626 ALT 628
              LT
Sbjct:   718 QLT 720

GO:0003723 "RNA binding" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9VCA8	ANKHM_DROME	No assigned EC number	0.5185	0.6454	0.1192	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	739
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-34
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-33
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-32
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-30
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	4e-27
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-26
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	7e-23
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	7e-23
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-22
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	7e-21
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-20
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-19
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-19
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	8e-19
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	1e-18
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-18
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	6e-18
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	4e-17
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	6e-17
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	9e-17
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	2e-16
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	3e-16
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	4e-16
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	5e-16
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	8e-16
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	8e-16
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	9e-16
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	5e-15
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	2e-14
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	3e-14
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	4e-14
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	4e-14
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	3e-13
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	8e-13
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	9e-13
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-12
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	3e-12
PHA02798	489	PHA02798, PHA02798, ankyrin-like protein; Provisio	9e-12
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-11
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	2e-11
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	2e-11
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-11
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	4e-11
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	4e-11
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	5e-11
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	8e-11
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	1e-10
PHA03100	422	PHA03100, PHA03100, ankyrin repeat protein; Provis	2e-10
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-10
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	5e-10
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	5e-10
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	5e-10
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-09
cd00204	126	cd00204, ANK, ankyrin repeats; ankyrin repeats med	1e-09
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	3e-09
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	3e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-09
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-09
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	8e-09
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	9e-09
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-08
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	4e-08
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	5e-08
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	1e-07
PHA02874	434	PHA02874, PHA02874, ankyrin repeat protein; Provis	2e-07
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	3e-07
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	5e-07
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	6e-07
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	7e-07
PHA02884	300	PHA02884, PHA02884, ankyrin repeat protein; Provis	1e-06
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-06
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-06
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	3e-06
PHA02859	209	PHA02859, PHA02859, ankyrin repeat protein; Provis	3e-06
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	4e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-06
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	5e-06
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	7e-06
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	9e-06
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	1e-05
PHA02875	413	PHA02875, PHA02875, ankyrin repeat protein; Provis	1e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	1e-05
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	2e-05
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	2e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	2e-05
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	4e-05
PHA02876	682	PHA02876, PHA02876, ankyrin repeat protein; Provis	4e-05
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	4e-05
pfam00023	33	pfam00023, Ank, Ankyrin repeat	4e-05
pfam12796	91	pfam12796, Ank_2, Ankyrin repeats (3 copies)	5e-05
PHA02878	477	PHA02878, PHA02878, ankyrin repeat protein; Provis	5e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	5e-05
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	6e-05
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	7e-05
smart00248	30	smart00248, ANK, ankyrin repeats	7e-05
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	9e-05
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	1e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	1e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	1e-04
smart00248	30	smart00248, ANK, ankyrin repeats	1e-04
smart00248	30	smart00248, ANK, ankyrin repeats	1e-04
smart00248	30	smart00248, ANK, ankyrin repeats	1e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	1e-04
PHA03095	471	PHA03095, PHA03095, ankyrin-like protein; Provisio	2e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	2e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	2e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-04
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	3e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	3e-04
smart00248	30	smart00248, ANK, ankyrin repeats	3e-04
PLN03192	823	PLN03192, PLN03192, Voltage-dependent potassium ch	4e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	4e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	4e-04
smart00248	30	smart00248, ANK, ankyrin repeats	4e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	4e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	4e-04
pfam00023	33	pfam00023, Ank, Ankyrin repeat	5e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	5e-04
TIGR00870	743	TIGR00870, trp, transient-receptor-potential calci	5e-04
PHA02884	300	PHA02884, PHA02884, ankyrin repeat protein; Provis	6e-04
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	8e-04
pfam13857	56	pfam13857, Ank_5, Ankyrin repeats (many copies)	8e-04
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	8e-04
PHA02946	446	PHA02946, PHA02946, ankyin-like protein; Provision	0.001
COG0666	235	COG0666, Arp, FOG: Ankyrin repeat [General functio	0.002
smart00248	30	smart00248, ANK, ankyrin repeats	0.002
PHA02741	169	PHA02741, PHA02741, hypothetical protein; Provisio	0.002
PTZ00322	664	PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fruct	0.003
pfam13637	54	pfam13637, Ank_4, Ankyrin repeats (many copies)	0.004
PHA02989	494	PHA02989, PHA02989, ankyrin repeat protein; Provis	0.004
pfam13606	30	pfam13606, Ank_3, Ankyrin repeat	0.004

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  127 bits (322), Expect = 1e-34
 Identities = 54/127 (42%), Positives = 76/127 (59%), Gaps = 1/127 (0%)

Query: 217 NGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILL 276
           N +   G TPL  A + GH  VV++LLE GA+V   + +G TPL  AA  GH+ + K+LL
Sbjct: 1   NARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLL 60

Query: 277 EYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHV 336
           E GA +N   ++   + L LA   G+LD+V+ LL  GAD   +  +  T L  A+ +GH+
Sbjct: 61  EKGADVN-ARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHL 119

Query: 337 EVAKLLL 343
           EV KLLL
Sbjct: 120 EVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  125 bits (315), Expect = 1e-33
 Identities = 53/120 (44%), Positives = 81/120 (67%), Gaps = 1/120 (0%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
            TPL  AAS+G +E+V+LL+ +GADVN + + G TPL  A   GH  +V++LLE GA+V 
Sbjct: 8   RTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVN 67

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
             +++G+TPL  AA  G++ V K+LL++GA +N   ++   + L LA   GHL++V+ LL
Sbjct: 68  ARDKDGNTPLHLAARNGNLDVVKLLLKHGADVN-ARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  121 bits (305), Expect = 2e-32
 Identities = 54/126 (42%), Positives = 78/126 (61%), Gaps = 1/126 (0%)

Query: 151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLI 210
              ++G + L LA S G+ E+ ++LL   A+V  +   G  TPL  AA +G +EIV+LL+
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDG-RTPLHLAAKNGHLEIVKLLL 60

Query: 211 NHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVG 270
             GADVN +   GNTPL  A   G+  VV++LL+ GA+V   +++G TPL  AA  GH+ 
Sbjct: 61  EKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLE 120

Query: 271 VAKILL 276
           V K+LL
Sbjct: 121 VVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  115 bits (290), Expect = 2e-30
 Identities = 52/118 (44%), Positives = 73/118 (61%), Gaps = 5/118 (4%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD- 589
           TPL  AA  GHLE+V+ LL++GA V+AK   G T L  A +NGH ++  LLL  GA+++ 
Sbjct: 9   TPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNA 68

Query: 590 ----NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLL 643
                +T L  AA+ G+ +VV+LLL     V+A+ + G T L  A +NGH +V  LLL
Sbjct: 69  RDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score =  106 bits (267), Expect = 4e-27
 Identities = 54/122 (44%), Positives = 73/122 (59%), Gaps = 8/122 (6%)

Query: 497 ETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGA 553
           E   T L LA   G L+V   LL+NGA++    +   TPL  AA+ GHLE+V+ LL+ GA
Sbjct: 5   EDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGA 64

Query: 554 QVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQL 608
            V+A+ + G+T L  A  NG+ DV  LLL +GA+++       T L  AAK GH  VV+L
Sbjct: 65  DVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKL 124

Query: 609 LL 610
           LL
Sbjct: 125 LL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score =  103 bits (260), Expect = 1e-26
 Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 2/90 (2%)

Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L  AA +G +E+V+LL+  GADVN   +  +T L  A   G+  +V++LLE GA+V   +
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDT--DTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGIN 283
           ++G+T L  AA  G++ + K+LLE+GA IN
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLEHGADIN 88

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 93.1 bits (232), Expect = 7e-23
 Identities = 39/94 (41%), Positives = 55/94 (58%), Gaps = 3/94 (3%)

Query: 160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
           L LA   G  EL ++LL   A+V + G     T L  AA +G +EIV+LL+ HGADVN +
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADV-NLGDT--DTALHLAARNGNLEIVKLLLEHGADVNAK 57

Query: 220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
              GNT L  A   G+  +V++LLE GA++   +
Sbjct: 58  DKDGNTALHLAARNGNLEIVKLLLEHGADINLKD 91

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 93.1 bits (232), Expect = 7e-23
 Identities = 38/88 (43%), Positives = 58/88 (65%), Gaps = 1/88 (1%)

Query: 503 LTLACCGGFLDVADFLLKNGANIELGA-STPLMEAAQEGHLELVRYLLDSGAQVHAKTQT 561
           L LA   G L++   LL+ GA++ LG   T L  AA+ G+LE+V+ LL+ GA V+AK + 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTDTALHLAARNGNLEIVKLLLEHGADVNAKDKD 60

Query: 562 GDTALTYACENGHTDVADLLLSYGANLD 589
           G+TAL  A  NG+ ++  LLL +GA+++
Sbjct: 61  GNTALHLAARNGNLEIVKLLLEHGADIN 88

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 90.4 bits (225), Expect = 5e-22
 Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 3/89 (3%)

Query: 227 LMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHS 286
           L  A   G+  +V++LLE GA+V   + +  T L  AA  G++ + K+LLE+GA +N   
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD--TALHLAARNGNLEIVKLLLEHGADVN-AK 57

Query: 287 NEFKESALTLACYKGHLDMVRFLLSAGAD 315
           ++   +AL LA   G+L++V+ LL  GAD
Sbjct: 58  DKDGNTALHLAARNGNLEIVKLLLEHGAD 86

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 87.3 bits (217), Expect = 7e-21
 Identities = 36/88 (40%), Positives = 55/88 (62%), Gaps = 3/88 (3%)

Query: 260 LMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHK 319
           L  AA  G++ + K+LLE GA +N    +   +AL LA   G+L++V+ LL  GAD   K
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD---TALHLAARNGNLEIVKLLLEHGADVNAK 57

Query: 320 TDEMHTALMEASMDGHVEVAKLLLDSGA 347
             + +TAL  A+ +G++E+ KLLL+ GA
Sbjct: 58  DKDGNTALHLAARNGNLEIVKLLLEHGA 85

Length = 91

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 86.2 bits (214), Expect = 2e-20
 Identities = 38/118 (32%), Positives = 59/118 (50%), Gaps = 30/118 (25%)

Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNST 592
           L  AA+ G+LELV+ LL+ GA V+      DTAL  A  NG+ ++  LLL +GA+++   
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDT--DTALHLAARNGNLEIVKLLLEHGADVNA-- 56

Query: 593 MLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
                                     K + G+TAL  A  NG+ ++  LLL +GA+++
Sbjct: 57  --------------------------KDKDGNTALHLAARNGNLEIVKLLLEHGADIN 88

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 84.4 bits (209), Expect = 2e-19
 Identities = 46/143 (32%), Positives = 70/143 (48%), Gaps = 18/143 (12%)

Query: 285 HSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344
             +E   + L LA   GHL++V+ LL  GAD   K ++  T L  A+ +GH+E+ KLLL+
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE 61

Query: 345 SGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETT 404
            GA  V+A  +    P                 L  A  +G++  VK LL  G  V+   
Sbjct: 62  KGA-DVNARDKDGNTP-----------------LHLAARNGNLDVVKLLLKHGADVNARD 103

Query: 405 DEGESLLSLACSAGYYELAQVLL 427
            +G + L LA   G+ E+ ++LL
Sbjct: 104 KDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 87.6 bits (216), Expect = 2e-19
 Identities = 62/216 (28%), Positives = 89/216 (41%), Gaps = 8/216 (3%)

Query: 157 ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADV 216
            +LL +        L  +LL +  ++ +   K     L  A          LL       
Sbjct: 6   SALLLINKCFLDLLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRH 65

Query: 217 NGQ-SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVG----- 270
                  G  PL  A + G + +V++LL  GA+V   + +G TPL  AA  G+       
Sbjct: 66  LAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIE 125

Query: 271 VAKILLEYGAG--INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALM 328
           VAK+LLE GA   +N   +E   + L  A   G  D+V  LL AGAD   +     TAL 
Sbjct: 126 VAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALD 185

Query: 329 EASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKC 364
            A+ +G +E+ KLLLD G          +   N   
Sbjct: 186 PAAKNGRIELVKLLLDKGLHLSLLKFNLEGVANANV 221

Length = 235

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 90.9 bits (225), Expect = 8e-19
 Identities = 100/314 (31%), Positives = 147/314 (46%), Gaps = 18/314 (5%)

Query: 46  LAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLAT------GDGKLADPEVLRRLTSS 99
           +A++LL   A+V  + I    TP+  AA  G  K+         D  +   + L  L  +
Sbjct: 160 IAEMLLEGGADVNAKDIYCI-TPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECA 218

Query: 100 V-SCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGES 158
           V S  +D   A +    N N   +N+ SL++A  + D++T   L   G SV+   D   +
Sbjct: 219 VDSKNIDTIKAIIDNRSNIN---KNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNT 275

Query: 159 LLSLACSA-GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF-IEIVRLLINHGADV 216
            L  A  A     L   LL   A+V  + IKGE TPL   A +G+  E +R LI  GADV
Sbjct: 276 PLHHASQAPSLSRLVPKLLERGADVNAKNIKGE-TPLYLMAKNGYDTENIRTLIMLGADV 334

Query: 217 NGQSSSGNTPLMYACA-GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
           N       TPL  A     ++ +V  LLE GANV   +    TP+  AA   +V +   L
Sbjct: 335 NAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTL 394

Query: 276 LEYGAGINTHSNEFKESALTLACYKGHLDM-VRFLLSAGADQEHKTDEMHTALMEASMDG 334
           L+YGA I   S +   +AL  A    +  M V+ L+  GA+   K  ++ T L  A    
Sbjct: 395 LDYGADIEALSQKIG-TALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKN 453

Query: 335 -HVEVAKLLLDSGA 347
             ++V ++LLD+GA
Sbjct: 454 CKLDVIEMLLDNGA 467

Length = 682

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 89.0 bits (221), Expect = 1e-18
 Identities = 59/242 (24%), Positives = 93/242 (38%), Gaps = 37/242 (15%)

Query: 135 DVKTVKKLLTEGRSVHETTDEGESLLSLACSA--GYYELAQVLLAMHANVEDRGIKGECT 192
             + VK LL  G +V+   + G + L  A S     Y + + LL   ANV  +   GE  
Sbjct: 85  VKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGE-N 143

Query: 193 PLMEAASSGFI--EIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
            L     S  I  +I++LLI+ G D+N ++                  V  LL  G  + 
Sbjct: 144 LLHLYLESNKIDLKILKLLIDKGVDINAKNR-----------------VNYLLSYGVPIN 186

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
             +  G TPL  A    +    K LL+ GA  N   N++ ++ L +A    + ++ + LL
Sbjct: 187 IKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNL-VNKYGDTPLHIAILNNNKEIFKLLL 245

Query: 311 SAGADQEH--------KTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPND 362
           + G   +         K  +++T      M     +   LLD G      Y       N 
Sbjct: 246 NNGPSIKTIIETLLYFKDKDLNTITKIK-MLKKSIMYMFLLDPG-----FYKNRKLIENS 299

Query: 363 KC 364
           K 
Sbjct: 300 KS 301

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 87.8 bits (218), Expect = 3e-18
 Identities = 61/272 (22%), Positives = 91/272 (33%), Gaps = 59/272 (21%)

Query: 356 HDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLAC 415
            D   +   ++P    Y   +             VK LL  G  ++ +T    + L    
Sbjct: 24  EDDLNDYSYKKPVLPLYLA-KEARNI------DVVKILLDNGADINSSTKNNSTPLHYLS 76

Query: 416 SAGYY-----ELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFF 470
           +  Y      E+ ++LL   ANV      G  TPL+ A         + S S        
Sbjct: 77  NIKYNLTDVKEIVKLLLEYGANVNAPDNNG-ITPLLYAI-----SKKSNSYSIV------ 124

Query: 471 PNDKSVNGLQASVILIPGAKINAHTEETQETALTLA--CCGGFLDVADFLLKNGANI--- 525
                        +L  GA +N       E  L L        L +   L+  G +I   
Sbjct: 125 -----------EYLLDNGANVNIKNS-DGENLLHLYLESNKIDLKILKLLIDKGVDINAK 172

Query: 526 -------ELGA---------STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYA 569
                    G           TPL  A    + E V+YLLD GA  +   + GDT L  A
Sbjct: 173 NRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIA 232

Query: 570 CENGHTDVADLLLSYGANLD--NSTMLIEAAK 599
             N + ++  LLL+ G ++     T+L    K
Sbjct: 233 ILNNNKEIFKLLLNNGPSIKTIIETLLYFKDK 264

Length = 422

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 87.0 bits (216), Expect = 6e-18
 Identities = 55/164 (33%), Positives = 80/164 (48%), Gaps = 16/164 (9%)

Query: 175 LLAMHANVEDRGIKGECTPL---MEAASSGFIEIVRLLINHGADVNGQSSSGNTPL-MYA 230
           LLA  A+V  RG  G  TPL   +  +S    +IVRLL+  GADVN     G TPL +Y 
Sbjct: 33  LLAAGADVNFRGEYG-KTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYL 91

Query: 231 CAGGHEAVVRVLLECGANVEDHNENGHTPLMEAAS--AGHVGVAKILLEYGAGINTHSNE 288
                  V+++L++ GA+V   ++ G TPL    S    +  V ++LL  GA +N     
Sbjct: 92  YNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVN----A 147

Query: 289 FKESALT-LACY-KGH---LDMVRFLLSAGADQEHKTDEMHTAL 327
                +T LA   K     ++++R L+ AGAD     D   + L
Sbjct: 148 LDLYGMTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLL 191

Length = 471

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 85.7 bits (212), Expect = 4e-17
 Identities = 52/172 (30%), Positives = 83/172 (48%), Gaps = 3/172 (1%)

Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+  AS+G   ++  L+    D +   S G TPL  A + G+E  V VLL+   NV   +
Sbjct: 529 LLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIRD 588

Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
            NG+T L  A SA H  + +IL  + +  + H+       L  A  +  L  ++ LL  G
Sbjct: 589 ANGNTALWNAISAKHHKIFRILYHFASISDPHAA---GDLLCTAAKRNDLTAMKELLKQG 645

Query: 314 ADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCE 365
            + + +  +  TAL  A  + HV++ +LL+ +GA    A    DF P +  E
Sbjct: 646 LNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRE 697

Length = 823

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 76.1 bits (188), Expect = 6e-17
 Identities = 34/91 (37%), Positives = 53/91 (58%), Gaps = 3/91 (3%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L  A  +G+++ VK LL +G  V+    + ++ L LA   G  E+ ++LL   A+V  + 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVN--LGDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVN 217
             G  T L  AA +G +EIV+LL+ HGAD+N
Sbjct: 59  KDG-NTALHLAARNGNLEIVKLLLEHGADIN 88

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 79.9 bits (196), Expect = 9e-17
 Identities = 55/155 (35%), Positives = 79/155 (50%), Gaps = 13/155 (8%)

Query: 520 KNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHT---- 575
           ++ A  +L    PL  AA +G  ++V+ LL SGA V+AK   GDT L  A  NG+     
Sbjct: 64  RHLAARDLDGRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGN 123

Query: 576 -DVADLLLSYGANLDNS--------TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTA 626
            +VA LLL  GA+LD +        T L  AA  G A++V+LLL+     +++   G TA
Sbjct: 124 IEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTA 183

Query: 627 LTYACENGHTDVADLLLSYGANLDNSTMLIEAAKG 661
           L  A +NG  ++  LLL  G +L      +E    
Sbjct: 184 LDPAAKNGRIELVKLLLDKGLHLSLLKFNLEGVAN 218

Length = 235

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 75.9 bits (187), Expect = 2e-16
 Identities = 43/127 (33%), Positives = 60/127 (47%), Gaps = 30/127 (23%)

Query: 618 AKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLD 672
           A+ + G T L  A  NGH +V  LLL  GA++     D  T L  AAK GH  +V+LLL+
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLE 61

Query: 673 FPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYG 732
                                    K + V+A+ + G+T L  A  NG+ DV  LLL +G
Sbjct: 62  -------------------------KGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHG 96

Query: 733 ANLRNRT 739
           A++  R 
Sbjct: 97  ADVNARD 103

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 81.2 bits (201), Expect = 3e-16
 Identities = 60/261 (22%), Positives = 100/261 (38%), Gaps = 47/261 (18%)

Query: 1   SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYY-----ELAQVLLAMHA 55
            L  A    ++  VK LL  G  ++ +T    + L    +  Y      E+ ++LL   A
Sbjct: 38  PLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGA 97

Query: 56  NVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAA-AALTRM 114
           NV      G  TPL+ A S           K     ++  L       LD  A   +   
Sbjct: 98  NVNAPDNNG-ITPLLYAISK----------KSNSYSIVEYL-------LDNGANVNIKNS 139

Query: 115 RNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQV 174
             EN        L    +  D+K +K L+ +G  ++   +    LLS             
Sbjct: 140 DGENLLH-----LYLESNKIDLKILKLLIDKGVDINAK-NRVNYLLSYGV---------- 183

Query: 175 LLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG 234
                 N++D  + G  TPL  A  +   E V+ L++ GA+ N  +  G+TPL  A    
Sbjct: 184 ----PINIKD--VYGF-TPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNN 236

Query: 235 HEAVVRVLLECGANVEDHNEN 255
           ++ + ++LL  G +++   E 
Sbjct: 237 NKEIFKLLLNNGPSIKTIIET 257

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 81.2 bits (201), Expect = 4e-16
 Identities = 47/179 (26%), Positives = 74/179 (41%), Gaps = 30/179 (16%)

Query: 512 LDVADFLLKNGANIELG---ASTPLMEAAQE--GHLELVRYLLDSGAQVHAKTQTGDTAL 566
            ++   LL+ GAN+        TPL+ A  +      +V YLLD+GA V+ K   G+  L
Sbjct: 86  KEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGENLL 145

Query: 567 TYACENGHTDV------------------ADLLLSYGANLDN-----STMLIEAAKGGHA 603
               E+   D+                   + LLSYG  ++       T L  A    + 
Sbjct: 146 HLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYNNNP 205

Query: 604 NVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--NSTMLIEAAK 660
             V+ LLD   + +   + GDT L  A  N + ++  LLL+ G ++     T+L    K
Sbjct: 206 EFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIKTIIETLLYFKDK 264

Length = 422

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 80.9 bits (200), Expect = 5e-16
 Identities = 56/194 (28%), Positives = 90/194 (46%), Gaps = 24/194 (12%)

Query: 178 MHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA 237
           M  ++ D   K    PL  A  +  I++V++L+++GAD+N  + + +TPL Y     +  
Sbjct: 23  MEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNL 82

Query: 238 -----VVRVLLECGANVEDHNENGHTPLMEAASA--GHVGVAKILLEYGAGINTHSNEFK 290
                +V++LLE GANV   + NG TPL+ A S       + + LL+ GA +N  +++ +
Sbjct: 83  TDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANVNIKNSDGE 142

Query: 291 ES-ALTLACYKGHLDMVRFLLSAGADQEHKT---------------DEM-HTALMEASMD 333
               L L   K  L +++ L+  G D   K                D    T L  A  +
Sbjct: 143 NLLHLYLESNKIDLKILKLLIDKGVDINAKNRVNYLLSYGVPINIKDVYGFTPLHYAVYN 202

Query: 334 GHVEVAKLLLDSGA 347
            + E  K LLD GA
Sbjct: 203 NNPEFVKYLLDLGA 216

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 72.7 bits (179), Expect = 8e-16
 Identities = 34/115 (29%), Positives = 56/115 (48%), Gaps = 28/115 (24%)

Query: 627 LTYACENGHTDVADLLLSYGANL---DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLS 683
           L  A +NG+ ++  LLL  GA++   D  T L  AA+ G+  +V+LLL+           
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTDTALHLAARNGNLEIVKLLLE----------- 49

Query: 684 SPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANLRNR 738
                           + V+AK + G+TAL  A  NG+ ++  LLL +GA++  +
Sbjct: 50  --------------HGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 77.2 bits (189), Expect = 8e-16
 Identities = 56/189 (29%), Positives = 83/189 (43%), Gaps = 11/189 (5%)

Query: 103 ALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSL 162
            L  A   L  +   NP  +     ++          + LL      H    + +  L L
Sbjct: 18  LLLVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSELLLKLIVDRHLAARDLDGRLPL 77

Query: 163 --ACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG-----FIEIVRLLINHGA- 214
             A S G  ++ ++LLA  A+V  +   G+ TPL  AA +G      IE+ +LL+  GA 
Sbjct: 78  HSAASKGDDKIVKLLLASGADVNAKDADGD-TPLHLAALNGNPPEGNIEVAKLLLEAGAD 136

Query: 215 --DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
               N +   GNTPL +A   G   +V +LLE GA+    N  G T L  AA  G + + 
Sbjct: 137 LDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELV 196

Query: 273 KILLEYGAG 281
           K+LL+ G  
Sbjct: 197 KLLLDKGLH 205

Length = 235

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 74.0 bits (182), Expect = 9e-16
 Identities = 47/151 (31%), Positives = 65/151 (43%), Gaps = 29/151 (19%)

Query: 402 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESV 461
              ++G + L LA S G+ E+ ++LL   A+V  +   G  TPL  AA +G      E V
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDG-RTPLHLAAKNGH----LEIV 56

Query: 462 SAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKN 521
                     N +  +G                      T L LA   G LDV   LLK+
Sbjct: 57  KLLLEKGADVNARDKDG---------------------NTPLHLAARNGNLDVVKLLLKH 95

Query: 522 GANIELGAS---TPLMEAAQEGHLELVRYLL 549
           GA++        TPL  AA+ GHLE+V+ LL
Sbjct: 96  GADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 71.6 bits (176), Expect = 5e-15
 Identities = 49/179 (27%), Positives = 71/179 (39%), Gaps = 61/179 (34%)

Query: 66  CTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNER 125
            TPL  AAS+G              EV++ L              L    + N +  + R
Sbjct: 8   RTPLHLAASNG------------HLEVVKLL--------------LENGADVNAKDNDGR 41

Query: 126 S-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184
           + L  A  +G ++ VK LL +G  V+    +G                            
Sbjct: 42  TPLHLAAKNGHLEIVKLLLEKGADVNARDKDG---------------------------- 73

Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL 243
                  TPL  AA +G +++V+LL+ HGADVN +   G TPL  A   GH  VV++LL
Sbjct: 74  ------NTPLHLAARNGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 76.4 bits (188), Expect = 2e-14
 Identities = 52/181 (28%), Positives = 91/181 (50%), Gaps = 7/181 (3%)

Query: 139 VKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLA-MHANVEDRGIKGECTPLMEA 197
           V  LL +    H+  +   +LL++A +     L ++L A +  ++ D   KG  TPL  A
Sbjct: 509 VGDLLGDNGGEHDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDS--KGR-TPLHIA 565

Query: 198 ASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGH 257
           AS G+ + V +L+ H  +V+ + ++GNT L  A +  H  + R+L    +  + H     
Sbjct: 566 ASKGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDPH--AAG 623

Query: 258 TPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQE 317
             L  AA    +   K LL+ G  +++  ++   +AL +A  + H+DMVR L+  GAD +
Sbjct: 624 DLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGA-TALQVAMAEDHVDMVRLLIMNGADVD 682

Query: 318 H 318
            
Sbjct: 683 K 683

Length = 823

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 75.0 bits (184), Expect = 3e-14
 Identities = 71/288 (24%), Positives = 119/288 (41%), Gaps = 42/288 (14%)

Query: 166 AGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNT 225
           +G  E  + ++    N  +  +    TPL++A  SG  +IV L I HGAD+N  ++    
Sbjct: 11  SGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIPH 70

Query: 226 PLMYACAGGHEAVVRVLLECGAN-----VEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280
           PL+ A   G   ++++L++ G +     +    ++               + K +L+ G 
Sbjct: 71  PLLTAIKIGAHDIIKLLIDNGVDTSILPIPCIEKD---------------MIKTILDCGI 115

Query: 281 GINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAK 340
            +N    E K + L  A  KG L+ ++ L   GAD   + D     +  A      ++ K
Sbjct: 116 DVNIKDAELK-TFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDIIK 174

Query: 341 LLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSV 400
           LLL+ G     AYA      ++  E P   +  Y          GD   +K L+  G  +
Sbjct: 175 LLLEKG-----AYAN---VKDNNGESPLHNAAEY----------GDYACIKLLIDHGNHI 216

Query: 401 HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEA 448
                 G + L  A    +   A  LL  +A++ D+ I G  TPL  A
Sbjct: 217 MNKCKNGFTPLHNAII--HNRSAIELLINNASINDQDIDGS-TPLHHA 261

Length = 434

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 68.1 bits (167), Expect = 4e-14
 Identities = 31/84 (36%), Positives = 48/84 (57%), Gaps = 7/84 (8%)

Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 652
           L  AAK G+  +V+LLL+    V+      DTAL  A  NG+ ++  LLL +GA+++   
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDT--DTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 653 ----TMLIEAAKGGHANVVQLLLD 672
               T L  AA+ G+  +V+LLL+
Sbjct: 59  KDGNTALHLAARNGNLEIVKLLLE 82

Length = 91

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 74.6 bits (183), Expect = 4e-14
 Identities = 54/196 (27%), Positives = 88/196 (44%), Gaps = 3/196 (1%)

Query: 135 DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPL 194
           D + +K L+  G        + ES L  A   G  +  + LL +    +D   K   TPL
Sbjct: 47  DSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPL 106

Query: 195 MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNE 254
             A     ++I++LLI  GAD +  ++   +PL  A   G    + +L++  A ++  + 
Sbjct: 107 HLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDC 166

Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
            G TPL+ A + G + + K+LL+ GA I+        +AL  A     +D+VR  +  GA
Sbjct: 167 CGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGA 226

Query: 315 DQEHKT---DEMHTAL 327
           D         E  T L
Sbjct: 227 DCNIMFMIEGEECTIL 242

Length = 413

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 73.0 bits (179), Expect = 3e-13
 Identities = 48/160 (30%), Positives = 73/160 (45%), Gaps = 11/160 (6%)

Query: 503 LTLACCG--GFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHA 557
           LT+A  G    L+    LLK   + ++G S   TPL  AA +G+ + V  LL     VH 
Sbjct: 530 LTVASTGNAALLEE---LLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHI 586

Query: 558 KTQTGDTALTYACENGHTDVADLLLSYGANLDNST---MLIEAAKGGHANVVQLLLDFPR 614
           +   G+TAL  A    H  +  +L  + +  D      +L  AAK      ++ LL    
Sbjct: 587 RDANGNTALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQGL 646

Query: 615 SVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTM 654
           +V ++   G TAL  A    H D+  LL+  GA++D +  
Sbjct: 647 NVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANT 686

Length = 823

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 64.6 bits (158), Expect = 8e-13
 Identities = 28/78 (35%), Positives = 44/78 (56%), Gaps = 6/78 (7%)

Query: 484 ILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEG 540
           +L  GA +N    +T   AL LA   G L++   LL++GA++        T L  AA+ G
Sbjct: 16  LLEKGADVNLGDTDT---ALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNG 72

Query: 541 HLELVRYLLDSGAQVHAK 558
           +LE+V+ LL+ GA ++ K
Sbjct: 73  NLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 65.5 bits (160), Expect = 9e-13
 Identities = 44/185 (23%), Positives = 71/185 (38%), Gaps = 60/185 (32%)

Query: 26  ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDG 85
              ++G + L LA S G+ E+ ++LL   A+V  +   G  TPL  AA +G         
Sbjct: 2   ARDEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDG-RTPLHLAAKNG--------- 51

Query: 86  KLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTE 145
                E+++ L                                              L +
Sbjct: 52  ---HLEIVKLL----------------------------------------------LEK 62

Query: 146 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEI 205
           G  V+    +G + L LA   G  ++ ++LL   A+V  R   G  TPL  AA +G +E+
Sbjct: 63  GADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARDKDG-RTPLHLAAKNGHLEV 121

Query: 206 VRLLI 210
           V+LL+
Sbjct: 122 VKLLL 126

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 70.3 bits (172), Expect = 1e-12
 Identities = 48/193 (24%), Positives = 90/193 (46%), Gaps = 3/193 (1%)

Query: 124 ERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 183
             ++  A ++ +V+  K +LT      +T D               E+ ++LL+  A++ 
Sbjct: 102 LVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGADIN 161

Query: 184 DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL 243
            +      T L  A  +    +  LL+++GA+VN    + N+PL +A    ++ +V +LL
Sbjct: 162 MKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHILL 221

Query: 244 ECGANVEDHNENGHTPL-MEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGH 302
           E GA+ +  ++ G+TPL +         + K+LLE+G  +N  S     +AL  +     
Sbjct: 222 ENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIKSE- 280

Query: 303 LDMVRFLLSAGAD 315
              ++ LL  GAD
Sbjct: 281 -RKLKLLLEYGAD 292

Length = 477

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 69.1 bits (169), Expect = 3e-12
 Identities = 60/255 (23%), Positives = 104/255 (40%), Gaps = 38/255 (14%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA------------------GY 168
           L QA    ++  VK LLT G +V++      + L + C                     Y
Sbjct: 41  LHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFY 100

Query: 169 YELA--------------QVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGA 214
             +A               +L   + N++   +        +       EI +LL+++GA
Sbjct: 101 TLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEA--EITKLLLSYGA 158

Query: 215 DVNGQS-SSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAK 273
           D+N +    GNT L YA     + +  +LL  GANV   ++  ++PL  A    +  +  
Sbjct: 159 DINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVH 218

Query: 274 ILLEYGAGINTHSNEFKESALTLAC-YKGHLDMVRFLLSAGADQEHKTDEMHTALMEASM 332
           ILLE GA  +   ++   + L ++  Y    D+++ LL  G D   K+  +    + +S+
Sbjct: 219 ILLENGASTD-ARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSI 277

Query: 333 DGHVEVAKLLLDSGA 347
                  KLLL+ GA
Sbjct: 278 KSE-RKLKLLLEYGA 291

Length = 477

>gnl|CDD|222931 PHA02798, PHA02798, ankyrin-like protein; Provisional

 Score = 67.9 bits (166), Expect = 9e-12
 Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 19/138 (13%)

Query: 203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGH---EAVVRVLLECGANVEDHNENGHTP 259
           ++IV++LI +GAD+N ++S G TPL    + G+     ++  ++E GA+    +++G T 
Sbjct: 89  LDIVKILIENGADINKKNSDGETPLYCLLSNGYINNLEILLFMIENGADTTLLDKDGFTM 148

Query: 260 LMEAASAGH---VGVAKILLEYGAGINTHSNEFKESALTLACY------KGHLDMVRFLL 310
           L     + H   + + K+LLE G  INTH+N+ K    TL CY      +   D+++  +
Sbjct: 149 LQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYD--TLHCYFKYNIDRIDADILKLFV 206

Query: 311 SAG-----ADQEHKTDEM 323
             G      ++ HK   M
Sbjct: 207 DNGFIINKENKSHKKKFM 224

Length = 489

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 67.8 bits (165), Expect = 1e-11
 Identities = 106/414 (25%), Positives = 169/414 (40%), Gaps = 88/414 (21%)

Query: 271 VAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEA 330
           +A++LLE GA +N   + +  + +  A  +G+  MV  LLS GAD      +  + L  A
Sbjct: 160 IAEMLLEGGADVNA-KDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECA 218

Query: 331 SMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTV 390
               +++  K ++D+         R +   ND              SL++A  + D++T 
Sbjct: 219 VDSKNIDTIKAIIDN---------RSNINKND-------------LSLLKAIRNEDLETS 256

Query: 391 KKLLTEGRSVHETTDEGESLLSLACSA-GYYELAQVLLAMHANVEDRGIKGECTPLMEAA 449
             L   G SV+   D   + L  A  A     L   LL   A+V  + IKGE TPL   A
Sbjct: 257 LLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNAKNIKGE-TPLYLMA 315

Query: 450 SSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACC- 508
            +G      E++                      +++ GA +NA  +    T L  A   
Sbjct: 316 KNGYD---TENIRT--------------------LIMLGADVNA-ADRLYITPLHQASTL 351

Query: 509 GGFLDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTA 565
               D+   LL+ GAN+   +    TP+  AA   ++ ++  LLD GA + A +Q   TA
Sbjct: 352 DRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADIEALSQKIGTA 411

Query: 566 LTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDT 625
           L +A               G N   S              V+ L+D   +V++K +   T
Sbjct: 412 LHFAL-------------CGTNPYMS--------------VKTLIDRGANVNSKNKDLST 444

Query: 626 ALTYACENG-HTDVADLLLSYGA-----NLDNSTMLIEAAKGGHANVVQLLLDF 673
            L YAC+     DV ++LL  GA     N+ N   L+ A    +  +V +LL +
Sbjct: 445 PLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLLIAL--EYHGIVNILLHY 496

Length = 682

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 64.1 bits (155), Expect = 2e-11
 Identities = 43/156 (27%), Positives = 69/156 (44%), Gaps = 17/156 (10%)

Query: 456 NLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLAC-----CGG 510
              +            +DK V      ++L  GA +NA  +   +T L LA        G
Sbjct: 69  RDLDGRLPLHSAASKGDDKIVK-----LLLASGADVNA-KDADGDTPLHLAALNGNPPEG 122

Query: 511 FLDVADFLLKNGANIELGAS------TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDT 564
            ++VA  LL+ GA++++         TPL  AA  G  ++V  LL++GA  +++   G T
Sbjct: 123 NIEVAKLLLEAGADLDVNNLRDEDGNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVT 182

Query: 565 ALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKG 600
           AL  A +NG  ++  LLL  G +L      +E    
Sbjct: 183 ALDPAAKNGRIELVKLLLDKGLHLSLLKFNLEGVAN 218

Length = 235

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 66.5 bits (162), Expect = 2e-11
 Identities = 37/126 (29%), Positives = 63/126 (50%), Gaps = 1/126 (0%)

Query: 138 TVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEA 197
            +K +L  G  V+    E ++ L  A   G  E  ++L    A+V      G C P+  A
Sbjct: 106 MIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNG-CYPIHIA 164

Query: 198 ASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGH 257
               F +I++LL+  GA  N + ++G +PL  A   G  A +++L++ G ++ +  +NG 
Sbjct: 165 IKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGF 224

Query: 258 TPLMEA 263
           TPL  A
Sbjct: 225 TPLHNA 230

Length = 434

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 58.4 bits (142), Expect = 3e-11
 Identities = 25/52 (48%), Positives = 34/52 (65%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLL 582
           T L +AA  G LELV+YLL+ G  ++   + G+TAL  A ENG+ +V  LLL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 65.9 bits (160), Expect = 4e-11
 Identities = 105/413 (25%), Positives = 173/413 (41%), Gaps = 85/413 (20%)

Query: 203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLME 262
           + I  +L+  GADVN +     TP+ YA   G+  +V +LL  GA+V     +  + L  
Sbjct: 158 LLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLEC 217

Query: 263 AASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDE 322
           A  + ++   K +++  + IN                                   K D 
Sbjct: 218 AVDSKNIDTIKAIIDNRSNIN-----------------------------------KND- 241

Query: 323 MHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQAC 382
              +L++A  +  +E + LL D+G  SV++       P     +  S+S           
Sbjct: 242 --LSLLKAIRNEDLETSLLLYDAGF-SVNSIDDCKNTPLHHASQAPSLS----------- 287

Query: 383 SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY-YELAQVLLAMHANVE--DRGIK 439
                + V KLL  G  V+    +GE+ L L    GY  E  + L+ + A+V   DR   
Sbjct: 288 -----RLVPKLLERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYI 342

Query: 440 GECTPLMEAASSGRQ-------CNLNESVSAYARHDFFPNDKSVNGLQASVILIP----- 487
              TPL +A++  R          L  +V+A    D  P   +   ++ +V++I      
Sbjct: 343 ---TPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYA--AVRNNVVIINTLLDY 397

Query: 488 GAKINAHTEETQETALTLACCGG--FLDVADFLLKNGANIELG---ASTPLMEAAQEG-H 541
           GA I A +++   TAL  A CG   ++ V   L+  GAN+       STPL  A ++   
Sbjct: 398 GADIEALSQKIG-TALHFALCGTNPYMSVKT-LIDRGANVNSKNKDLSTPLHYACKKNCK 455

Query: 542 LELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTML 594
           L+++  LLD+GA V+A        L  A    +  + ++LL YGA L +S +L
Sbjct: 456 LDVIEMLLDNGADVNAINIQNQYPLLIAL--EYHGIVNILLHYGAELRDSRVL 506

Length = 682

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 65.7 bits (160), Expect = 4e-11
 Identities = 47/168 (27%), Positives = 81/168 (48%), Gaps = 11/168 (6%)

Query: 135 DVKTVKKLLTEGRSVH-ETTDEGESLLSLACSAGYYELAQVLLAMHA--NVEDRGIKGEC 191
           + +  K LL+ G  ++ +   +G + L  A       L ++LL+  A  N+ D+      
Sbjct: 146 EAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNN--- 202

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE-AVVRVLLECGANVE 250
           +PL  A       IV +L+ +GA  + +   GNTPL  +     +  ++++LLE G +V 
Sbjct: 203 SPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVN 262

Query: 251 DHNE-NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLA 297
             +   G T L  +  +      K+LLEYGA IN+  N +K + L+ A
Sbjct: 263 AKSYILGLTALHSSIKSERK--LKLLLEYGADINS-LNSYKLTPLSSA 307

Length = 477

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 65.4 bits (160), Expect = 5e-11
 Identities = 57/174 (32%), Positives = 85/174 (48%), Gaps = 14/174 (8%)

Query: 195 MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA---VVRVLLECGANVED 251
           +  AS+  +E VR L+  GADVN +   G TPL        E    +VR+LLE GA+V  
Sbjct: 19  LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNA 78

Query: 252 HNENGHTPL-MEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKG---HLDMVR 307
               G TPL +   +A  + V K+L++ GA +N   ++   + L      G   +  ++R
Sbjct: 79  PERCGFTPLHLYLYNATTLDVIKLLIKAGADVNA-KDKVGRTPLH-VYLSGFNINPKVIR 136

Query: 308 FLLSAGADQEHKTDEMHTAL--MEASMDGHVEVAKLLLDSGAQSVSAYARHDFF 359
            LL  GAD         T L  +  S + +VE+ +LL+D+GA     YA  D F
Sbjct: 137 LLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAGA---DVYAVDDRF 187

Length = 471

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 57.2 bits (139), Expect = 8e-11
 Identities = 21/52 (40%), Positives = 31/52 (59%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL 243
           T L +AA SG +E+V+ L+  G D+N     GNT L  A   G+  V+++LL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 64.3 bits (156), Expect = 1e-10
 Identities = 101/396 (25%), Positives = 168/396 (42%), Gaps = 80/396 (20%)

Query: 238 VVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLA 297
           +  +LLE GA+V   +    TP+  AA  G+  +  +LL YGA +N  + +   S L  A
Sbjct: 160 IAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALD-DLSVLECA 218

Query: 298 CYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHD 357
               ++D ++ ++    D     ++   +L++A  +  +E + LL D+G  SV++     
Sbjct: 219 VDSKNIDTIKAII----DNRSNINKNDLSLLKAIRNEDLETSLLLYDAGF-SVNSIDDCK 273

Query: 358 FFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA 417
             P     +  S+S                + V KLL  G  V+    +GE+ L L    
Sbjct: 274 NTPLHHASQAPSLS----------------RLVPKLLERGADVNAKNIKGETPLYLMAKN 317

Query: 418 GY-YELAQVLLAMHANVE--DRGIKGECTPLMEAASSGRQ-------CNLNESVSAYARH 467
           GY  E  + L+ + A+V   DR      TPL +A++  R          L  +V+A    
Sbjct: 318 GYDTENIRTLIMLGADVNAADRLYI---TPLHQASTLDRNKDIVITLLELGANVNARDYC 374

Query: 468 DFFPNDKSVNGLQASVILIP-----GAKINAHTEETQETALTLACCGGFLDVADFLLKNG 522
           D  P   +   ++ +V++I      GA I A +++   TAL  A CG             
Sbjct: 375 DKTPIHYA--AVRNNVVIINTLLDYGADIEALSQKIG-TALHFALCG------------- 418

Query: 523 ANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG-HTDVADLL 581
                  + P M          V+ L+D GA V++K +   T L YAC+     DV ++L
Sbjct: 419 -------TNPYMS---------VKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEML 462

Query: 582 LSYGA-----NLDNSTMLIEAAKGGHANVVQLLLDF 612
           L  GA     N+ N   L+ A    +  +V +LL +
Sbjct: 463 LDNGADVNAINIQNQYPLLIAL--EYHGIVNILLHY 496

Length = 682

>gnl|CDD|222984 PHA03100, PHA03100, ankyrin repeat protein; Provisional

 Score = 63.1 bits (154), Expect = 2e-10
 Identities = 54/250 (21%), Positives = 100/250 (40%), Gaps = 28/250 (11%)

Query: 203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLME 262
           ++ ++ +I      +        PL  A    +  VV++LL+ GA++    +N  TPL  
Sbjct: 15  VKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHY 74

Query: 263 AASAGHV-----GVAKILLEYGAGINTHSNEFKESALTLACYK-GHLDMVRFLLSAGADQ 316
            ++  +       + K+LLEYGA +N   N      L     K     +V +LL  GA+ 
Sbjct: 75  LSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKKSNSYSIVEYLLDNGANV 134

Query: 317 EHKTDEMHTALMEASMDGHV--EVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTY 374
             K  +    L        +  ++ KLL+D G   ++A  R ++           +SY  
Sbjct: 135 NIKNSDGENLLHLYLESNKIDLKILKLLIDKGVD-INAKNRVNYL----------LSYGV 183

Query: 375 ---------SRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQV 425
                       L  A  + + + VK LL  G + +     G++ L +A      E+ ++
Sbjct: 184 PINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLVNKYGDTPLHIAILNNNKEIFKL 243

Query: 426 LLAMHANVED 435
           LL    +++ 
Sbjct: 244 LLNNGPSIKT 253

Length = 422

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 56.5 bits (137), Expect = 5e-10
 Identities = 35/144 (24%), Positives = 54/144 (37%), Gaps = 55/144 (38%)

Query: 294 LTLACYKGHLDMVRFLLSAGAD-QEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA 352
           L LA   G+L++V+ LL  GAD     TD   TAL  A+ +G++E+ KLLL+ GA     
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVNLGDTD---TALHLAARNGNLEIVKLLLEHGA----- 52

Query: 353 YARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS 412
                                                          V+    +G + L 
Sbjct: 53  ----------------------------------------------DVNAKDKDGNTALH 66

Query: 413 LACSAGYYELAQVLLAMHANVEDR 436
           LA   G  E+ ++LL   A++  +
Sbjct: 67  LAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 61.9 bits (150), Expect = 5e-10
 Identities = 47/187 (25%), Positives = 80/187 (42%), Gaps = 30/187 (16%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSV-HETTDEGESLLSLACSAGYYELAQVLL--------- 176
           L+ A   GD K V+  +  G  + H  T     LL+ A   G +++ ++L+         
Sbjct: 39  LIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLT-AIKIGAHDIIKLLIDNGVDTSIL 97

Query: 177 ----------------AMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS 220
                            +  N++D  +K   T L  A   G +E +++L  +GADVN + 
Sbjct: 98  PIPCIEKDMIKTILDCGIDVNIKDAELK---TFLHYAIKKGDLESIKMLFEYGADVNIED 154

Query: 221 SSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280
            +G  P+  A       ++++LLE GA     + NG +PL  AA  G     K+L+++G 
Sbjct: 155 DNGCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGN 214

Query: 281 GINTHSN 287
            I     
Sbjct: 215 HIMNKCK 221

Length = 434

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 62.6 bits (152), Expect = 5e-10
 Identities = 36/85 (42%), Positives = 48/85 (56%)

Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L + A+SG     R+L+  GAD N +   G TPL  ACA GH  VVRVLLE GA+    +
Sbjct: 86  LCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLD 145

Query: 254 ENGHTPLMEAASAGHVGVAKILLEY 278
           ++G TPL  A   G   V ++L  +
Sbjct: 146 KDGKTPLELAEENGFREVVQLLSRH 170

Length = 664

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 62.1 bits (151), Expect = 5e-10
 Identities = 57/228 (25%), Positives = 103/228 (45%), Gaps = 40/228 (17%)

Query: 135 DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYY-------ELAQVLLAMHANVEDRGI 187
           D   ++ LL  G  V+E    G S+L L     Y        ++ ++L+   A+V  +G 
Sbjct: 15  DKNALEFLLRTGFDVNEEYR-GNSILLL-----YLKRKDVKIKIVKLLIDNGADVNYKGY 68

Query: 188 KGECTPL------MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLM---YACAGGHEAV 238
               TPL       E  S+   +IV+LL+  GAD+N ++ +G +P++   Y     +  +
Sbjct: 69  IE--TPLCAVLRNREITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDM 126

Query: 239 VRVLLECGANVED-HNENGHTPL---MEAASAGHVGVAKILLEYGAGINTHSNEFKESAL 294
           +R LL  G NV D  N  G+  L   +E+ S     V KILL +G  +           L
Sbjct: 127 LRFLLSKGINVNDVKNSRGYNLLHMYLESFSV-KKDVIKILLSFGVNL-FEKTSLYG--L 182

Query: 295 T-LACYKGH------LDMVRFLLSAGADQEHKTDEMHTALMEASMDGH 335
           T +  Y  +      + ++++L+  G + E   +    +++E+ +D +
Sbjct: 183 TPMNIYLRNDIDVISIKVIKYLIKKGVNIE-TNNNGSESVLESFLDNN 229

Length = 494

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 28/75 (37%), Positives = 41/75 (54%), Gaps = 1/75 (1%)

Query: 2  LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
          L  A S+G ++ VK LL  G  V+   ++G + L LA   G+ E+ ++LL   A+V  R 
Sbjct: 11 LHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARD 70

Query: 62 IKGECTPLMEAASSG 76
            G  TPL  AA +G
Sbjct: 71 KDG-NTPLHLAARNG 84

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|238125 cd00204, ANK, ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

 Score = 56.2 bits (136), Expect = 1e-09
 Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           L  A  +G ++ VK LL +G  V+    +G + L LA   G  ++ ++LL   A+V  R 
Sbjct: 44  LHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAARNGNLDVVKLLLKHGADVNARD 103

Query: 62  IKGECTPLMEAASSGFGKLA 81
             G  TPL  AA +G  ++ 
Sbjct: 104 KDG-RTPLHLAAKNGHLEVV 122

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats. Length = 126

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 60.1 bits (145), Expect = 3e-09
 Identities = 79/283 (27%), Positives = 121/283 (42%), Gaps = 30/283 (10%)

Query: 1   SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA-GYYELAQVLLAMHANVED 59
           SL++A  + D++T   L   G SV+   D   + L  A  A     L   LL   A+V  
Sbjct: 243 SLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADVNA 302

Query: 60  RGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENP 119
           + IKGE TPL   A +G+           D E +R L       L     A  R+     
Sbjct: 303 KNIKGE-TPLYLMAKNGY-----------DTENIRTLIM-----LGADVNAADRLYIT-- 343

Query: 120 RPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 179
            P ++ S +    D     V  LL  G +V+      ++ +  A       +   LL   
Sbjct: 344 -PLHQASTLDRNKD----IVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYG 398

Query: 180 ANVEDRGIK-GECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA- 237
           A++E    K G         ++ ++  V+ LI+ GA+VN ++   +TPL YAC    +  
Sbjct: 399 ADIEALSQKIGTALHFALCGTNPYMS-VKTLIDRGANVNSKNKDLSTPLHYACKKNCKLD 457

Query: 238 VVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280
           V+ +LL+ GA+V   N     PL+ A    + G+  ILL YGA
Sbjct: 458 VIEMLLDNGADVNAINIQNQYPLLIA--LEYHGIVNILLHYGA 498

Length = 682

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 59.2 bits (143), Expect = 3e-09
 Identities = 45/157 (28%), Positives = 71/157 (45%), Gaps = 2/157 (1%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           +P+  A      E ++LL+ HGA  + +     + L  A   G    V  LL+ G   +D
Sbjct: 37  SPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADD 96

Query: 252 -HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
              ++G TPL  A     + + K+L+  GA  +   N  K S L LA   G +  +  L+
Sbjct: 97  VFYKDGMTPLHLATILKKLDIMKLLIARGADPDI-PNTDKFSPLHLAVMMGDIKGIELLI 155

Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
              A  + +     T L+ A   G + + K+LLDSGA
Sbjct: 156 DHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGA 192

Length = 413

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 52.6 bits (127), Expect = 4e-09
 Identities = 21/55 (38%), Positives = 34/55 (61%), Gaps = 1/55 (1%)

Query: 256 GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
           G T L +AA +G + + K LLE G  IN  ++E   +AL +A   G+L++++ LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDIN-RTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 52.2 bits (126), Expect = 5e-09
 Identities = 21/54 (38%), Positives = 31/54 (57%)

Query: 223 GNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILL 276
           G T L  A   G   +V+ LLE G ++   +E+G+T L  AA  G++ V K+LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 53.0 bits (128), Expect = 8e-09
 Identities = 24/76 (31%), Positives = 39/76 (51%), Gaps = 3/76 (3%)

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 437
           L  A  +G+++ VK LL +G  V+    + ++ L LA   G  E+ ++LL   A+V  + 
Sbjct: 1   LHLAAKNGNLELVKLLLEKGADVN--LGDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 438 IKGECTPLMEAASSGR 453
             G  T L  AA +G 
Sbjct: 59  KDG-NTALHLAARNGN 73

Length = 91

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 57.7 bits (139), Expect = 9e-09
 Identities = 41/156 (26%), Positives = 64/156 (41%), Gaps = 12/156 (7%)

Query: 528 GASTPLMEAAQEGHLELVRYLLDSGAQVH-AKTQTGDTALTYACENGHTDVADLLLSYGA 586
              + L +A +EG ++ V  LLD G        + G T L  A      D+  LL++ GA
Sbjct: 67  DIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIARGA 126

Query: 587 -----NLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADL 641
                N D  + L  A   G    ++LL+D    +  +   G T L  A   G   +  +
Sbjct: 127 DPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKM 186

Query: 642 LLSYGANLD------NSTMLIEAAKGGHANVVQLLL 671
           LL  GAN+D          L  A +    ++V+L +
Sbjct: 187 LLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFI 222

Length = 413

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 52.6 bits (127), Expect = 1e-08
 Identities = 24/80 (30%), Positives = 41/80 (51%), Gaps = 3/80 (3%)

Query: 2  LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
          L  A  +G+++ VK LL +G  V+    + ++ L LA   G  E+ ++LL   A+V  + 
Sbjct: 1  LHLAAKNGNLELVKLLLEKGADVN--LGDTDTALHLAARNGNLEIVKLLLEHGADVNAKD 58

Query: 62 IKGECTPLMEAASSGFGKLA 81
            G  T L  AA +G  ++ 
Sbjct: 59 KDG-NTALHLAARNGNLEIV 77

Length = 91

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 56.8 bits (137), Expect = 4e-08
 Identities = 46/181 (25%), Positives = 73/181 (40%), Gaps = 28/181 (15%)

Query: 576 DVADLLLSYGANLDNSTM---LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACE 632
           +V DLL   G   D+  M   L+  A  G+A +++ LL            G T L  A  
Sbjct: 508 NVGDLLGDNGGEHDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAAS 567

Query: 633 NGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSD 687
            G+ D   +LL +  N+     + +T L  A    H  + ++L  F       S+S P  
Sbjct: 568 KGYEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHF------ASISDPHA 621

Query: 688 DSSSHLCSQGKKS-------------GVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
            +   LC+  K++              V ++   G TAL  A    H D+  LL+  GA+
Sbjct: 622 -AGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGAD 680

Query: 735 L 735
           +
Sbjct: 681 V 681

Length = 823

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 55.7 bits (134), Expect = 5e-08
 Identities = 53/214 (24%), Positives = 92/214 (42%), Gaps = 37/214 (17%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQV-HAKTQTGDTALTYACENGHTDVADLLLSYGANLD 589
           TPL++A + G  ++V   +  GA + H  T+     LT A + G  D+  LL+  G  +D
Sbjct: 37  TPLIDAIRSGDAKIVELFIKHGADINHINTKIPHPLLT-AIKIGAHDIIKLLIDNG--VD 93

Query: 590 NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 649
            S + I   +    ++++ +LD    V+ K     T L YA + G  +   +L  YGA++
Sbjct: 94  TSILPIPCIEK---DMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADV 150

Query: 650 ----DNSTMLIE-AAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHA 704
               DN    I  A K    ++++LLL+                         K +  + 
Sbjct: 151 NIEDDNGCYPIHIAIKHNFFDIIKLLLE-------------------------KGAYANV 185

Query: 705 KTQTGDTALTYACENGHTDVADLLLSYGANLRNR 738
           K   G++ L  A E G      LL+ +G ++ N+
Sbjct: 186 KDNNGESPLHNAAEYGDYACIKLLIDHGNHIMNK 219

Length = 434

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 54.1 bits (130), Expect = 1e-07
 Identities = 63/291 (21%), Positives = 106/291 (36%), Gaps = 55/291 (18%)

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA----GYYELAQVLLAMHANV 433
           L QA    ++  VK LLT G +V++      + L + C      G  E+ + +       
Sbjct: 41  LHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVFY 100

Query: 434 EDRGIKGECTPLMEAASSGRQCNL----------NESVSAYARHDFFPNDKSVNGLQASV 483
               IK           + R   +          N         D    D  +      +
Sbjct: 101 TLVAIKDAF--------NNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKL 152

Query: 484 ILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI---ELGASTPLMEAAQEG 540
           +L  GA IN        TAL  A       + + LL  GAN+   +   ++PL  A +  
Sbjct: 153 LLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHY 212

Query: 541 HLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKG 600
           +  +V  LL++GA   A+ + G+T L  +              Y                
Sbjct: 213 NKPIVHILLENGASTDARDKCGNTPLHIS--------VGYCKDY---------------- 248

Query: 601 GHANVVQLLLDFPRSVHAKTQT-GDTALTYACENGHTDVADLLLSYGANLD 650
              ++++LLL+    V+AK+   G TAL  + ++       LLL YGA+++
Sbjct: 249 ---DILKLLLEHGVDVNAKSYILGLTALHSSIKS--ERKLKLLLEYGADIN 294

Length = 477

>gnl|CDD|165205 PHA02874, PHA02874, ankyrin repeat protein; Provisional

 Score = 53.4 bits (128), Expect = 2e-07
 Identities = 46/169 (27%), Positives = 74/169 (43%), Gaps = 13/169 (7%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRY 547
           GA IN H        L  A   G  D+   L+ NG +  +    P +E       ++++ 
Sbjct: 58  GADIN-HINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSI-LPIPCIEK------DMIKT 109

Query: 548 LLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL----DNSTMLIE-AAKGGH 602
           +LD G  V+ K     T L YA + G  +   +L  YGA++    DN    I  A K   
Sbjct: 110 ILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNF 169

Query: 603 ANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 651
            ++++LLL+     + K   G++ L  A E G      LL+ +G ++ N
Sbjct: 170 FDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIKLLIDHGNHIMN 218

Length = 434

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 53.1 bits (127), Expect = 3e-07
 Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 4/98 (4%)

Query: 501 TALTLACCGGFLDVADFLLKNGA--NIELG-ASTPLMEAAQEGHLELVRYLLDSGAQVHA 557
           + L LA   G +   + L+ + A  +IE     TPL+ A  +G + + + LLDSGA +  
Sbjct: 137 SPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICKMLLDSGANIDY 196

Query: 558 KTQTGD-TALTYACENGHTDVADLLLSYGANLDNSTML 594
             + G   AL YA EN   D+  L +  GA+ +   M+
Sbjct: 197 FGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMI 234

Length = 413

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 52.3 bits (125), Expect = 5e-07
 Identities = 39/155 (25%), Positives = 73/155 (47%), Gaps = 2/155 (1%)

Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L +A   G ++I R L++ G + N +   G +P+  A        +++L++ GA + D  
Sbjct: 6   LCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGA-IPDVK 64

Query: 254 ENG-HTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312
                + L +A   G V   + LL+ G   +    +   + L LA     LD+++ L++ 
Sbjct: 65  YPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPLHLATILKKLDIMKLLIAR 124

Query: 313 GADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           GAD +    +  + L  A M G ++  +LL+D  A
Sbjct: 125 GADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKA 159

Length = 413

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 52.4 bits (125), Expect = 6e-07
 Identities = 70/262 (26%), Positives = 116/262 (44%), Gaps = 43/262 (16%)

Query: 491 INAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHL-ELVRYLL 549
           + A   E  ET+L L   G  ++          +I+   +TPL  A+Q   L  LV  LL
Sbjct: 245 LKAIRNEDLETSLLLYDAGFSVN----------SIDDCKNTPLHHASQAPSLSRLVPKLL 294

Query: 550 DSGAQVHAKTQTGDTALTYACENGH-TDVADLLLSYGANLDNS-----TMLIEAAK-GGH 602
           + GA V+AK   G+T L    +NG+ T+    L+  GA+++ +     T L +A+    +
Sbjct: 295 ERGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLYITPLHQASTLDRN 354

Query: 603 ANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGG 662
            ++V  LL+   +V+A+     T + YA    +  + + LL YGA+       IEA    
Sbjct: 355 KDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGAD-------IEALSQK 407

Query: 663 HANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENG-H 721
               +   L            +    S   L  +G  + V++K +   T L YAC+    
Sbjct: 408 IGTALHFAL----------CGTNPYMSVKTLIDRG--ANVNSKNKDLSTPLHYACKKNCK 455

Query: 722 TDVADLLLSYGA-----NLRNR 738
            DV ++LL  GA     N++N+
Sbjct: 456 LDVIEMLLDNGADVNAINIQNQ 477

Length = 682

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 51.9 bits (125), Expect = 7e-07
 Identities = 47/163 (28%), Positives = 74/163 (45%), Gaps = 27/163 (16%)

Query: 518 LLKNGANI----ELGASTPL---MEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYAC 570
           LL  GA++    E G  TPL   +  + E   ++VR LL++GA V+A  + G T L    
Sbjct: 33  LLAAGADVNFRGEYG-KTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGFTPLHLYL 91

Query: 571 ENGHT-DVADLLLSYGANL------DNSTMLIEAA-KGGHANVVQLLLDFPRSVHAKTQT 622
            N  T DV  LL+  GA++        + + +  +    +  V++LLL     V+A    
Sbjct: 92  YNATTLDVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALD-- 149

Query: 623 GDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHAN 665
                      G T +A LL S  AN++   +LI+A    +A 
Sbjct: 150 ---------LYGMTPLAVLLKSRNANVELLRLLIDAGADVYAV 183

Length = 471

>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional

 Score = 50.8 bits (121), Expect = 1e-06
 Identities = 33/99 (33%), Positives = 54/99 (54%), Gaps = 4/99 (4%)

Query: 238 VVRVLLECGANVE---DHNENGHT-PLMEAASAGHVGVAKILLEYGAGINTHSNEFKESA 293
           ++  +L+ GA+ E     +EN  T PL+ A    +   AK+L+ YGA +N ++ E K + 
Sbjct: 48  IIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITP 107

Query: 294 LTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASM 332
           L ++   G L  +  LLS GAD   +T++M T +  A M
Sbjct: 108 LYISVLHGCLKCLEILLSYGADINIQTNDMVTPIELALM 146

Length = 300

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 50.8 bits (122), Expect = 2e-06
 Identities = 44/165 (26%), Positives = 62/165 (37%), Gaps = 15/165 (9%)

Query: 204 EIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA--VVRVLLECGANVEDHNENGHTPLM 261
            IVR LI  G D       GNTPL     G      +V  LL  G ++   N  G TPL 
Sbjct: 203 RIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLH 262

Query: 262 EAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTD 321
            AA   +    + L+  GA IN  S++   + L+L     +   VR  L+         +
Sbjct: 263 YAAVFNNPRACRRLIALGADINAVSSD-GNTPLSLMVRNNNGRAVRAALAKNPS----AE 317

Query: 322 EMHTALMEASMDGHVE--------VAKLLLDSGAQSVSAYARHDF 358
            +   L  AS+ G           VAK++L      +    R   
Sbjct: 318 TVAATLNTASVAGGDIPSDATRLCVAKVVLRGAFSLLPEPIRAYH 362

Length = 471

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 44.1 bits (105), Expect = 2e-06
 Identities = 16/32 (50%), Positives = 21/32 (65%)

Query: 223 GNTPLMYACAGGHEAVVRVLLECGANVEDHNE 254
           GNTPL  A   GH  VV++LLE GA+V   ++
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 44.5 bits (106), Expect = 3e-06
 Identities = 24/53 (45%), Positives = 35/53 (66%), Gaps = 2/53 (3%)

Query: 292 SALTLACYKGHLDMVRFLLSAGADQEHKTDEMH-TALMEASMDGHVEVAKLLL 343
           +AL  A   G L++V++LL  G D  ++TDE   TAL  A+ +G++EV KLLL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVD-INRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 44.7 bits (106), Expect = 3e-06
 Identities = 19/56 (33%), Positives = 29/56 (51%)

Query: 208 LLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEA 263
           LL +   D+N    +GNTPL  A   G   +V+ LL+ G ++   + +G T L  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|165195 PHA02859, PHA02859, ankyrin repeat protein; Provisional

 Score = 48.3 bits (115), Expect = 3e-06
 Identities = 26/122 (21%), Positives = 56/122 (45%), Gaps = 8/122 (6%)

Query: 203 IEIVRLLINHGADVNGQSSSGN-TPLMYACA---GGHEAVVRVLLECGANVEDHNENGHT 258
           +EI++ LI +GADVN ++   N + L +  +        ++++L++ G+++ + +E+G  
Sbjct: 66  VEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITEEDEDGKN 125

Query: 259 PL---MEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD 315
            L   M   +   + V K+L++ G        +      +   +     +  FL S G D
Sbjct: 126 LLHMYMCNFNV-RINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGID 184

Query: 316 QE 317
             
Sbjct: 185 IN 186

Length = 209

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 49.6 bits (118), Expect = 4e-06
 Identities = 58/224 (25%), Positives = 89/224 (39%), Gaps = 24/224 (10%)

Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA-----N 587
           L +A   G L++ R LLD G   + +   G + +  A +   ++   LL+ +GA      
Sbjct: 6   LCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKY 65

Query: 588 LDNSTMLIEAAKGGHANVVQLLLD---FPRSVHAKTQTGDTALTYACENGHTDVADLLLS 644
            D  + L +A + G    V+ LLD   F   V  K   G T L  A      D+  LL++
Sbjct: 66  PDIESELHDAVEEGDVKAVEELLDLGKFADDVFYK--DGMTPLHLATILKKLDIMKLLIA 123

Query: 645 YGA-----NLDNSTMLIEAAKGGHANVVQLLLDFPRS--VIGGSLSSP----SDDSSSHL 693
            GA     N D  + L  A   G    ++LL+D      +      +P           +
Sbjct: 124 RGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAI 183

Query: 694 CSQGKKSGVHAK--TQTGD-TALTYACENGHTDVADLLLSYGAN 734
           C     SG +     + G   AL YA EN   D+  L +  GA+
Sbjct: 184 CKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGAD 227

Length = 413

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)

Query: 562 GDTALTYACENGHTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLL 610
           G TAL  A  +G  ++   LL  G +++ +     T L  AA+ G+  V++LLL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 43.8 bits (104), Expect = 5e-06
 Identities = 18/54 (33%), Positives = 29/54 (53%), Gaps = 5/54 (9%)

Query: 623 GDTALTYACENGHTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLL 671
           G TAL  A  +G  ++   LL  G +++ +     T L  AA+ G+  V++LLL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 49.1 bits (117), Expect = 7e-06
 Identities = 63/280 (22%), Positives = 105/280 (37%), Gaps = 45/280 (16%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAG----GHEAVVRVLLECG 246
             PL +A  +  +++V+ L+  G +VN       TPL   C      G + ++R + +C 
Sbjct: 38  FIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCS 97

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD-- 304
                        + +A +  +V + KI+L      N + N  +   L     K   D  
Sbjct: 98  VF------YTLVAIKDAFNNRNVEIFKIIL-----TNRYKNI-QTIDLVYIDKKSKDDII 145

Query: 305 ---MVRFLLSAGADQEHKT-DEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFP 360
              + + LLS GAD   K   + +TAL  A+ +    + +LLL  GA             
Sbjct: 146 EAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGAN------------ 193

Query: 361 NDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY- 419
                  +    T +  L  A    +   V  LL  G S       G + L +  S GY 
Sbjct: 194 ------VNIPDKTNNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHI--SVGYC 245

Query: 420 --YELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNL 457
             Y++ ++LL    +V  +      T L  +  S R+  L
Sbjct: 246 KDYDILKLLLEHGVDVNAKSYILGLTALHSSIKSERKLKL 285

Length = 477

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 48.9 bits (116), Expect = 9e-06
 Identities = 55/209 (26%), Positives = 93/209 (44%), Gaps = 33/209 (15%)

Query: 535 EAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN-----LD 589
           E  Q+  L +   LL+ GA V+AK     T + YA E G+  + +LLLSYGA+     LD
Sbjct: 151 ERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALD 210

Query: 590 NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 649
           + ++L  A    + + ++ ++D   +++      D +L  A  N   D+   LL Y A  
Sbjct: 211 DLSVLECAVDSKNIDTIKAIIDNRSNINKN----DLSLLKAIRN--EDLETSLLLYDAGF 264

Query: 650 DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSG--VHAKTQ 707
                            V  + D   + +  +  +P   S S L  +  + G  V+AK  
Sbjct: 265 S----------------VNSIDDCKNTPLHHASQAP---SLSRLVPKLLERGADVNAKNI 305

Query: 708 TGDTALTYACENGH-TDVADLLLSYGANL 735
            G+T L    +NG+ T+    L+  GA++
Sbjct: 306 KGETPLYLMAKNGYDTENIRTLIMLGADV 334

Length = 682

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 44.2 bits (105), Expect = 1e-05
 Identities = 18/64 (28%), Positives = 33/64 (51%)

Query: 122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 181
             + +L  A  +G+++ VK LL  G  V+    +G + L LA   G  E+ ++LL   A+
Sbjct: 27  DTDTALHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGAD 86

Query: 182 VEDR 185
           +  +
Sbjct: 87  INLK 90

Length = 91

>gnl|CDD|165206 PHA02875, PHA02875, ankyrin repeat protein; Provisional

 Score = 48.1 bits (114), Expect = 1e-05
 Identities = 36/131 (27%), Positives = 56/131 (42%), Gaps = 6/131 (4%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD- 589
           TPL  A     L++++ L+  GA          + L  A   G     +LL+ + A LD 
Sbjct: 104 TPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDI 163

Query: 590 ----NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGD-TALTYACENGHTDVADLLLS 644
                 T LI A   G   + ++LLD   ++    + G   AL YA EN   D+  L + 
Sbjct: 164 EDCCGCTPLIIAMAKGDIAICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIK 223

Query: 645 YGANLDNSTML 655
            GA+ +   M+
Sbjct: 224 RGADCNIMFMI 234

Length = 413

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 43.0 bits (102), Expect = 1e-05
 Identities = 19/50 (38%), Positives = 29/50 (58%)

Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLL 643
           L +AA  G   +V+ LL+    ++   + G+TAL  A ENG+ +V  LLL
Sbjct: 5   LHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 42.2 bits (100), Expect = 1e-05
 Identities = 15/27 (55%), Positives = 20/27 (74%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVN 217
            TPL  AA +G +E+V+LL+  GADVN
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGADVN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 43.4 bits (103), Expect = 2e-05
 Identities = 18/59 (30%), Positives = 31/59 (52%)

Query: 2  LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 60
          L  A  +G+++ VK LL  G  V+    +G + L LA   G  E+ ++LL   A++  +
Sbjct: 32 LHLAARNGNLEIVKLLLEHGADVNAKDKDGNTALHLAARNGNLEIVKLLLEHGADINLK 90

Length = 91

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 47.3 bits (113), Expect = 2e-05
 Identities = 65/266 (24%), Positives = 103/266 (38%), Gaps = 42/266 (15%)

Query: 10  DVKTVKKLLTEGRSVHETTDEGES-LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTP 68
               V+ LL  G  V+     G + L     +A   ++ ++L+   A+V  +   G  TP
Sbjct: 62  VKDIVRLLLEAGADVNAPERCGFTPLHLYLYNATTLDVIKLLIKAGADVNAKDKVGR-TP 120

Query: 69  LMEAASSGFGKLATGDGKLADPEVLR---RLTSSVSCALDE----AAAALTRMRNENPRP 121
           L    S          G   +P+V+R   R  + V  ALD       A L + RN N   
Sbjct: 121 LHVYLS----------GFNINPKVIRLLLRKGADV-NALDLYGMTPLAVLLKSRNAN--- 166

Query: 122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL-SLACSA-GYYELAQVLLAMH 179
                         V+ ++ L+  G  V+   D   SLL     S      + + L+   
Sbjct: 167 --------------VELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAG 212

Query: 180 ANVEDRGIKGECTPLMEAA--SSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA 237
            +     + G  TPL   A  SS    +V  L+  G  +N ++  G TPL YA    +  
Sbjct: 213 CDPAATDMLGN-TPLHSMATGSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPR 271

Query: 238 VVRVLLECGANVEDHNENGHTPLMEA 263
             R L+  GA++   + +G+TPL   
Sbjct: 272 ACRRLIALGADINAVSSDGNTPLSLM 297

Length = 471

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 48.0 bits (114), Expect = 2e-05
 Identities = 28/80 (35%), Positives = 41/80 (51%), Gaps = 1/80 (1%)

Query: 232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKE 291
           A G     R+LL  GA+    + +G TPL  A + GHV V ++LLE+GA       + K 
Sbjct: 91  ASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGK- 149

Query: 292 SALTLACYKGHLDMVRFLLS 311
           + L LA   G  ++V+ L  
Sbjct: 150 TPLELAEENGFREVVQLLSR 169

Length = 664

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGIN 283
           +G+TPL  AA  GH+ V K+LLE GA +N
Sbjct: 1   DGNTPLHLAARNGHLEVVKLLLEAGADVN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 41.8 bits (99), Expect = 2e-05
 Identities = 16/29 (55%), Positives = 23/29 (79%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKT 559
           TPL  AA+ GHLE+V+ LL++GA V+A+ 
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 562 GDTALTYACENGHTDVADLLLSYGANLD 589
           G+T L  A  NGH +V  LLL  GA+++
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 41.4 bits (98), Expect = 2e-05
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 623 GDTALTYACENGHTDVADLLLSYGANLD 650
           G+T L  A  NGH +V  LLL  GA+++
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 45.2 bits (106), Expect = 4e-05
 Identities = 37/146 (25%), Positives = 53/146 (36%), Gaps = 45/146 (30%)

Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNST 653
           L  AA  G   +V+LLL     V+AK   GDT L  A  NG+                  
Sbjct: 77  LHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPP---------------- 120

Query: 654 MLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTAL 713
                   G+  V +LLL+       G+    ++                     G+T L
Sbjct: 121 -------EGNIEVAKLLLEA------GADLDVNNLRDE----------------DGNTPL 151

Query: 714 TYACENGHTDVADLLLSYGANLRNRT 739
            +A  NG  D+ +LLL  GA+  +R 
Sbjct: 152 HWAALNGDADIVELLLEAGADPNSRN 177

Length = 235

>gnl|CDD|165207 PHA02876, PHA02876, ankyrin repeat protein; Provisional

 Score = 47.0 bits (111), Expect = 4e-05
 Identities = 42/162 (25%), Positives = 76/162 (46%), Gaps = 10/162 (6%)

Query: 512 LDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTY 568
           L +A+ LL+ GA++   ++   TP+  AA+ G+ ++V  LL  GA V+       + L  
Sbjct: 158 LLIAEMLLEGGADVNAKDIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLEC 217

Query: 569 ACENGHTDVADLLLSYGANLD-NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTAL 627
           A ++ + D    ++   +N++ N   L++A +        LL D   SV++     +T L
Sbjct: 218 AVDSKNIDTIKAIIDNRSNINKNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPL 277

Query: 628 TYACENGH-TDVADLLLSYGA-----NLDNSTMLIEAAKGGH 663
            +A +    + +   LL  GA     N+   T L   AK G+
Sbjct: 278 HHASQAPSLSRLVPKLLERGADVNAKNIKGETPLYLMAKNGY 319

Length = 682

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 41.5 bits (98), Expect = 4e-05
 Identities = 16/53 (30%), Positives = 27/53 (50%), Gaps = 1/53 (1%)

Query: 158 SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLI 210
           + L  A  +G  EL + LL    ++      G  T L  AA +G +E+++LL+
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGN-TALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 40.6 bits (96), Expect = 4e-05
 Identities = 14/31 (45%), Positives = 18/31 (58%)

Query: 709 GDTALTYACENGHTDVADLLLSYGANLRNRT 739
           G+T L  A  NGH +V  LLL  GA++  R 
Sbjct: 2   GNTPLHLAARNGHLEVVKLLLEAGADVNARD 32

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|205076 pfam12796, Ank_2, Ankyrin repeats (3 copies)

 Score = 42.2 bits (100), Expect = 5e-05
 Identities = 22/85 (25%), Positives = 33/85 (38%), Gaps = 27/85 (31%)

Query: 655 LIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALT 714
           L  AAK G+  +V+LLL+                            G        DTAL 
Sbjct: 1   LHLAAKNGNLELVKLLLE---------------------------KGADVNLGDTDTALH 33

Query: 715 YACENGHTDVADLLLSYGANLRNRT 739
            A  NG+ ++  LLL +GA++  + 
Sbjct: 34  LAARNGNLEIVKLLLEHGADVNAKD 58

Length = 91

>gnl|CDD|222939 PHA02878, PHA02878, ankyrin repeat protein; Provisional

 Score = 46.0 bits (109), Expect = 5e-05
 Identities = 62/255 (24%), Positives = 100/255 (39%), Gaps = 54/255 (21%)

Query: 532 PLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACEN------------------G 573
           PL +A +  +L++V+ LL  G  V+       T L   C+                    
Sbjct: 40  PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSVF 99

Query: 574 HTDVADLLLSYGANLDNSTM-LIEAAKGGH-----------------ANVVQLLLDFPRS 615
           +T VA        N++   + L    K                    A + +LLL +   
Sbjct: 100 YTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDLVYIDKKSKDDIIEAEITKLLLSYGAD 159

Query: 616 VHAKTQ-TGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQL 669
           ++ K +  G+TAL YA EN    + +LLLSYGAN++     N++ L  A K  +  +V +
Sbjct: 160 INMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYNKPIVHI 219

Query: 670 LLDFPRSVIGGSL--SSPSDDSSSHLCSQG-------KKSGVHAKTQT-GDTALTYACEN 719
           LL+   S        ++P   S  +                V+AK+   G TAL  + ++
Sbjct: 220 LLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSSIKS 279

Query: 720 GHTDVADLLLSYGAN 734
                  LLL YGA+
Sbjct: 280 --ERKLKLLLEYGAD 292

Length = 477

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 41.2 bits (97), Expect = 5e-05
 Identities = 18/56 (32%), Positives = 28/56 (50%)

Query: 275 LLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEA 330
           LLE+G      ++    + L LA   G L++V++LL  G D   +  +  TAL  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 46.0 bits (109), Expect = 6e-05
 Identities = 38/123 (30%), Positives = 52/123 (42%), Gaps = 11/123 (8%)

Query: 473 DKSVNGLQASVILIPGAKINAHTEETQETA----LTLACC----GGFLDVADFLLKNGAN 524
           D  +  L+A+         N  TEE  +      LT+  C     G    A  LL  GA+
Sbjct: 48  DTHLEALEATENKDATPDHNLTTEEVIDPVVAHMLTVELCQLAASGDAVGARILLTGGAD 107

Query: 525 ---IELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLL 581
               +    TPL  A   GH+++VR LL+ GA      + G T L  A ENG  +V  LL
Sbjct: 108 PNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREVVQLL 167

Query: 582 LSY 584
             +
Sbjct: 168 SRH 170

Length = 664

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.8 bits (96), Expect = 7e-05
 Identities = 20/57 (35%), Positives = 30/57 (52%), Gaps = 2/57 (3%)

Query: 242 LLECGANVEDH-NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLA 297
           LLE G    +  + NG+TPL  AA  G + + + LL+ G  +N   +    +AL LA
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLR-DSDGLTALDLA 56

Length = 56

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 39.9 bits (94), Expect = 7e-05
 Identities = 14/27 (51%), Positives = 21/27 (77%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVN 217
            TPL  AA +G +E+V+LL++ GAD+N
Sbjct: 3   RTPLHLAAENGNLEVVKLLLDKGADIN 29

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 45.4 bits (108), Expect = 9e-05
 Identities = 69/334 (20%), Positives = 107/334 (32%), Gaps = 52/334 (15%)

Query: 261 MEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGH---LDMVRFLLSAGADQE 317
           +  AS   V   + LL  GA +N    E+ ++ L L  +       D+VR LL AGAD  
Sbjct: 19  LLNASNVTVEEVRRLLAAGADVN-FRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVN 77

Query: 318 HKTDEMHTALMEASMDGHVE-VAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSR 376
                  T L     +     V KLL+ +GA  V          N K +          R
Sbjct: 78  APERCGFTPLHLYLYNATTLDVIKLLIKAGA-DV----------NAKDK--------VGR 118

Query: 377 SLVQACSDG---DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV 433
           + +     G   + K ++ LL +G  V+     G +                   +   +
Sbjct: 119 TPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMT------------------PLAVLL 160

Query: 434 EDRGIKGECTPLMEAASSGRQCNLNESVSAYARH-DFFPNDKSVNGLQASVILIPGAKIN 492
           + R    E   L+  A +      +   S    H   F     +          P A   
Sbjct: 161 KSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDM 220

Query: 493 AHTEETQETALTLACCGGFLDVADFLLKN-GANIE--LGASTPLMEAAQEGHLELVRYLL 549
                    A   +C      V   L+     N     G  TPL  AA   +    R L+
Sbjct: 221 LGNTPLHSMATGSSCKR--SLVLPLLIAGISINARNRYGQ-TPLHYAAVFNNPRACRRLI 277

Query: 550 DSGAQVHAKTQTGDTALTYACENGHTDVADLLLS 583
             GA ++A +  G+T L+    N +       L+
Sbjct: 278 ALGADINAVSSDGNTPLSLMVRNNNGRAVRAALA 311

Length = 471

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 44.9 bits (106), Expect = 1e-04
 Identities = 49/193 (25%), Positives = 77/193 (39%), Gaps = 15/193 (7%)

Query: 377 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 436
           +L+   S G+   +++LL           +G + L +A S GY +   VLL    NV  R
Sbjct: 528 NLLTVASTGNAALLEELLKAKLDPDIGDSKGRTPLHIAASKGYEDCVLVLLKHACNVHIR 587

Query: 437 GIKGECTPLMEAASSGRQCNLN-----ESVS-AYARHDFFPNDKSVNGLQASVILIPGAK 490
              G  T L  A S+             S+S  +A  D        N L A   L+    
Sbjct: 588 DANGN-TALWNAISAKHHKIFRILYHFASISDPHAAGDLLCTAAKRNDLTAMKELLKQG- 645

Query: 491 INAHTEETQ-ETALTLACCGGFLDVADFLLKNGANI------ELGASTPLMEAAQEGHLE 543
           +N  +E+ Q  TAL +A     +D+   L+ NGA++      +  + T L E  Q+  L 
Sbjct: 646 LNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRELLQKRELG 705

Query: 544 LVRYLLDSGAQVH 556
               ++DS     
Sbjct: 706 HSITIVDSVPADE 718

Length = 823

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 39.9 bits (94), Expect = 1e-04
 Identities = 16/54 (29%), Positives = 30/54 (55%)

Query: 374 YSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 427
              +L +A   G ++ VK LL +G  ++ T ++G + L +A   G  E+ ++LL
Sbjct: 1   GRTALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 40.0 bits (94), Expect = 1e-04
 Identities = 19/56 (33%), Positives = 27/56 (48%), Gaps = 1/56 (1%)

Query: 175 LLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYA 230
           L     ++      G  TPL  AA  G +E+V+ L+  G D+N + S G T L  A
Sbjct: 2   LEHGPIDLNATDGNGN-TPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 562 GDTALTYACENGHTDVADLLLSYGANLD 589
           G T L  A ENG+ +V  LLL  GA+++
Sbjct: 2   GRTPLHLAAENGNLEVVKLLLDKGADIN 29

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 13/28 (46%), Positives = 18/28 (64%)

Query: 623 GDTALTYACENGHTDVADLLLSYGANLD 650
           G T L  A ENG+ +V  LLL  GA+++
Sbjct: 2   GRTPLHLAAENGNLEVVKLLLDKGADIN 29

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 39.1 bits (92), Expect = 1e-04
 Identities = 12/29 (41%), Positives = 18/29 (62%)

Query: 223 GNTPLMYACAGGHEAVVRVLLECGANVED 251
           G TPL  A   G+  VV++LL+ GA++  
Sbjct: 2   GRTPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 39.5 bits (93), Expect = 1e-04
 Identities = 15/27 (55%), Positives = 21/27 (77%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVN 217
            TPL  AA +G +E+V+LL+ HGAD+N
Sbjct: 3   NTPLHLAARNGNLELVKLLLEHGADIN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|222980 PHA03095, PHA03095, ankyrin-like protein; Provisional

 Score = 44.6 bits (106), Expect = 2e-04
 Identities = 62/293 (21%), Positives = 115/293 (39%), Gaps = 54/293 (18%)

Query: 382 CSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGE 441
            S+  V+ V++LL  G  V+   + G++ L L       ++  ++               
Sbjct: 22  ASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRL------------- 68

Query: 442 CTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQET 501
              L+EA   G   N  E       H +  N  +++ ++  +++  GA +NA  ++   T
Sbjct: 69  ---LLEA---GADVNAPERCGFTPLHLYLYNATTLDVIK--LLIKAGADVNA-KDKVGRT 119

Query: 502 ALTLACCGGF---LDVADFLLKNGANIE---LGASTPLMEAAQEGH---------LELVR 546
            L      GF     V   LL+ GA++    L   TPL                 +EL+R
Sbjct: 120 PLH-VYLSGFNINPKVIRLLLRKGADVNALDLYGMTPL-------AVLLKSRNANVELLR 171

Query: 547 YLLDSGAQVHAKTQTGDTALTYACENGHTD-------VADLLLSYGANLDNSTMLIEAAK 599
            L+D+GA V+A      + L +  ++           +         ++  +T L   A 
Sbjct: 172 LLIDAGADVYAVDDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMAT 231

Query: 600 GG--HANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
           G     ++V  LL    S++A+ + G T L YA    +      L++ GA+++
Sbjct: 232 GSSCKRSLVLPLLIAGISINARNRYGQTPLHYAAVFNNPRACRRLIALGADIN 284

Length = 471

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 39.6 bits (93), Expect = 2e-04
 Identities = 21/56 (37%), Positives = 31/56 (55%), Gaps = 4/56 (7%)

Query: 518 LLKNGAN----IELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYA 569
           LL++G       +   +TPL  AA+ G LELV++LL  G  ++ +   G TAL  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 38.8 bits (91), Expect = 2e-04
 Identities = 13/27 (48%), Positives = 19/27 (70%)

Query: 223 GNTPLMYACAGGHEAVVRVLLECGANV 249
           GNTPL  A   G+  +V++LLE GA++
Sbjct: 2   GNTPLHLAARNGNLELVKLLLEHGADI 28

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 39.1 bits (92), Expect = 3e-04
 Identities = 16/52 (30%), Positives = 30/52 (57%)

Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 176
            +L +A   G ++ VK LL +G  ++ T ++G + L +A   G  E+ ++LL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 38.8 bits (91), Expect = 3e-04
 Identities = 16/50 (32%), Positives = 29/50 (58%)

Query: 2  LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 51
          L +A   G ++ VK LL +G  ++ T ++G + L +A   G  E+ ++LL
Sbjct: 5  LHKAAISGRLELVKYLLEKGVDINRTDEDGNTALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 44.1 bits (104), Expect = 3e-04
 Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 4/94 (4%)

Query: 263 AASAGHVGVAKILLEYGAGINTHSNEFKESA-LTLACYKGHLDMVRFLLSAGADQEHKTD 321
           AAS   VG A+ILL  GA  + +  ++     L +AC  GH+ +VR LL  GAD      
Sbjct: 90  AASGDAVG-ARILLTGGA--DPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDK 146

Query: 322 EMHTALMEASMDGHVEVAKLLLDSGAQSVSAYAR 355
           +  T L  A  +G  EV +LL           A 
Sbjct: 147 DGKTPLELAEENGFREVVQLLSRHSQCHFELGAN 180

Length = 664

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 38.3 bits (90), Expect = 3e-04
 Identities = 13/27 (48%), Positives = 17/27 (62%)

Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
           G T L  A ENG+ +V  LLL  GA++
Sbjct: 2   GRTPLHLAAENGNLEVVKLLLDKGADI 28

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|215625 PLN03192, PLN03192, Voltage-dependent potassium channel; Provisional

 Score = 43.3 bits (102), Expect = 4e-04
 Identities = 43/199 (21%), Positives = 85/199 (42%), Gaps = 27/199 (13%)

Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFK-ESALTLACYKGHLDMVRF 308
           E  + N  + L+  AS G+  + + LL+  A ++    + K  + L +A  KG+ D V  
Sbjct: 519 EHDDPNMASNLLTVASTGNAALLEELLK--AKLDPDIGDSKGRTPLHIAASKGYEDCVLV 576

Query: 309 LLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPS 368
           LL    +   +    +TAL  A    H ++ ++L             + F         +
Sbjct: 577 LLKHACNVHIRDANGNTALWNAISAKHHKIFRIL-------------YHF---------A 614

Query: 369 SIS--YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVL 426
           SIS  +     L  A    D+  +K+LL +G +V     +G + L +A +  + ++ ++L
Sbjct: 615 SISDPHAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLL 674

Query: 427 LAMHANVEDRGIKGECTPL 445
           +   A+V+      + +P 
Sbjct: 675 IMNGADVDKANTDDDFSPT 693

Length = 823

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 43.7 bits (103), Expect = 4e-04
 Identities = 27/79 (34%), Positives = 37/79 (46%), Gaps = 5/79 (6%)

Query: 572 NGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTA 626
           +G    A +LL+ GA+      D  T L  A   GH  VV++LL+F        + G T 
Sbjct: 92  SGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTP 151

Query: 627 LTYACENGHTDVADLLLSY 645
           L  A ENG  +V  LL  +
Sbjct: 152 LELAEENGFREVVQLLSRH 170

Length = 664

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 43.3 bits (102), Expect = 4e-04
 Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 5/88 (5%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE--D 184
           L Q  + GD    + LLT G   +    +G + L +AC+ G+ ++ +VLL   A+    D
Sbjct: 86  LCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLD 145

Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINH 212
           +  K   TPL  A  +GF E+V+LL  H
Sbjct: 146 KDGK---TPLELAEENGFREVVQLLSRH 170

Length = 664

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 38.0 bits (89), Expect = 4e-04
 Identities = 15/29 (51%), Positives = 20/29 (68%)

Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGIN 283
           +G TPL  AA  G++ V K+LL+ GA IN
Sbjct: 1   DGRTPLHLAAENGNLEVVKLLLDKGADIN 29

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 37.6 bits (88), Expect = 4e-04
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 562 GDTALTYACENGHTDVADLLLSYGANLD 589
           G+T L  A  NG+ ++  LLL +GA+++
Sbjct: 2   GNTPLHLAARNGNLELVKLLLEHGADIN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 37.6 bits (88), Expect = 4e-04
 Identities = 11/28 (39%), Positives = 19/28 (67%)

Query: 623 GDTALTYACENGHTDVADLLLSYGANLD 650
           G+T L  A  NG+ ++  LLL +GA+++
Sbjct: 2   GNTPLHLAARNGNLELVKLLLEHGADIN 29

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|200936 pfam00023, Ank, Ankyrin repeat

 Score = 37.5 bits (88), Expect = 5e-04
 Identities = 13/31 (41%), Positives = 18/31 (58%)

Query: 291 ESALTLACYKGHLDMVRFLLSAGADQEHKTD 321
            + L LA   GHL++V+ LL AGAD   +  
Sbjct: 3   NTPLHLAARNGHLEVVKLLLEAGADVNARDK 33

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Repeats 13-24 are especially active, with known sites of interaction for the Na/K ATPase, Cl/HCO(3) anion exchanger, voltage-gated sodium channel, clathrin heavy chain and L1 family cell adhesion molecules. The ANK repeats are found to form a contiguous spiral stack such that ion transporters like the anion exchanger associate in a large central cavity formed by the ANK repeat spiral, while clathrin and cell adhesion molecules associate with specific regions outside this cavity. Length = 33

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 37.6 bits (88), Expect = 5e-04
 Identities = 15/30 (50%), Positives = 22/30 (73%)

Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINT 284
           +G+TPL  AA  G++ + K+LLE+GA IN 
Sbjct: 1   DGNTPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|233161 TIGR00870, trp, transient-receptor-potential calcium channel protein

 Score = 43.1 bits (102), Expect = 5e-04
 Identities = 46/181 (25%), Positives = 60/181 (33%), Gaps = 44/181 (24%)

Query: 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECT-------------PLMEAASSG 201
            G + L LA     YE+ ++LL   A+V  R                    PL  AA  G
Sbjct: 127 PGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLG 186

Query: 202 FIEIVRLLINHGADVNGQSSSGNTPL-------------------MYACAGGHEAVVRVL 242
              IV LL    AD+    S GNT L                   MY  A      +R  
Sbjct: 187 SPSIVALLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDS 246

Query: 243 LECGANVED-HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKE---SALTLAC 298
            E    +E   N  G TPL  AA  G + + ++ L     I     +F         L+ 
Sbjct: 247 KE----LEVILNHQGLTPLKLAAKEGRIVLFRLKLA----IKYKQKKFVAWPNGQQLLSL 298

Query: 299 Y 299
           Y
Sbjct: 299 Y 299

The Transient Receptor Potential Ca2+ Channel (TRP-CC) Family (TC. 1.A.4)The TRP-CC family has also been called the store-operated calcium channel (SOC) family. The prototypical members include the Drosophila retinal proteinsTRP and TRPL (Montell and Rubin, 1989; Hardie and Minke, 1993). SOC members of the family mediate the entry of extracellular Ca2+ into cells in responseto depletion of intracellular Ca2+ stores (Clapham, 1996) and agonist stimulated production of inositol-1,4,5 trisphosphate (IP3). One member of the TRP-CCfamily, mammalian Htrp3, has been shown to form a tight complex with the IP3 receptor (TC #1.A.3.2.1). This interaction is apparently required for IP3 tostimulate Ca2+ release via Htrp3. The vanilloid receptor subtype 1 (VR1), which is the receptor for capsaicin (the ?hot? ingredient in chili peppers) and servesas a heat-activated ion channel in the pain pathway (Caterina et al., 1997), is also a member of this family. The stretch-inhibitable non-selective cation channel(SIC) is identical to the vanilloid receptor throughout all of its first 700 residues, but it exhibits a different sequence in its last 100 residues. VR1 and SICtransport monovalent cations as well as Ca2+. VR1 is about 10x more permeable to Ca2+ than to monovalent ions. Ca2+ overload probably causes cell deathafter chronic exposure to capsaicin. (McCleskey and Gold, 1999) [Transport and binding proteins, Cations and iron carrying compounds]. Length = 743

>gnl|CDD|165212 PHA02884, PHA02884, ankyrin repeat protein; Provisional

 Score = 42.3 bits (99), Expect = 6e-04
 Identities = 27/92 (29%), Positives = 46/92 (50%), Gaps = 5/92 (5%)

Query: 202 FIEIVRLLINHGADVNGQ----SSSGNTPLMYACAGGHEAVVRVLLECGANVEDH-NENG 256
           + +I+  ++  GAD         +S   PL+YA    ++   ++L+  GA+V  +  E  
Sbjct: 45  YTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAK 104

Query: 257 HTPLMEAASAGHVGVAKILLEYGAGINTHSNE 288
            TPL  +   G +   +ILL YGA IN  +N+
Sbjct: 105 ITPLYISVLHGCLKCLEILLSYGADINIQTND 136

Length = 300

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 42.6 bits (100), Expect = 8e-04
 Identities = 26/82 (31%), Positives = 39/82 (47%), Gaps = 3/82 (3%)

Query: 172 AQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYAC 231
           A++LL   A+   R   G  TPL  A ++G +++VR+L+  GAD       G TPL  A 
Sbjct: 98  ARILLTGGADPNCRDYDGR-TPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAE 156

Query: 232 AGGHEAVVRVLLECGANVEDHN 253
             G   VV++L     +     
Sbjct: 157 ENGFREVVQLLSRH--SQCHFE 176

Length = 664

>gnl|CDD|206028 pfam13857, Ank_5, Ankyrin repeats (many copies)

 Score = 37.7 bits (88), Expect = 8e-04
 Identities = 19/56 (33%), Positives = 25/56 (44%), Gaps = 6/56 (10%)

Query: 581 LLSYGANLDNS------TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYA 630
           LL +G    N+      T L  AAK G   +VQ LL     ++ +   G TAL  A
Sbjct: 1   LLEHGPIDLNATDGNGNTPLHLAAKYGALELVQWLLKPGVDLNLRDSDGLTALDLA 56

Length = 56

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 36.8 bits (86), Expect = 8e-04
 Identities = 11/27 (40%), Positives = 18/27 (66%)

Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
           G+T L  A  NG+ ++  LLL +GA++
Sbjct: 2   GNTPLHLAARNGNLELVKLLLEHGADI 28

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

>gnl|CDD|165256 PHA02946, PHA02946, ankyin-like protein; Provisional

 Score = 41.6 bits (97), Expect = 0.001
 Identities = 71/278 (25%), Positives = 119/278 (42%), Gaps = 29/278 (10%)

Query: 135 DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA--NVEDRGIKGECT 192
           D + V++LL  G S +ET D+G   L +A       +  +LL   A  N  D+  K   T
Sbjct: 51  DERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQHK---T 107

Query: 193 PL--MEAASSGFIEIVRLLINHGADVNGQ-SSSGNTPLMYACAGGHEAVVRVLLECGANV 249
           PL  +       IE + LL+ +GA +N      G  PL+ AC    E V + ++  G   
Sbjct: 108 PLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEA 166

Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGIN-THSNEFKESALTLACYK--GHLDMV 306
              ++ G   +     + +   + I      GI+ +  +    + L + C K   ++D++
Sbjct: 167 RIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKPDHDGNTPLHIVCSKTVKNVDII 226

Query: 307 RFLL-SAGADQEHK-TDEMHTALMEASMDGHVEVAKLLLDSGA---QSVSA---YARHDF 358
             LL S   ++++K  D   T L++     H+ + KLL  S     Q+V+    Y R D 
Sbjct: 227 NLLLPSTDVNKQNKFGDSPLTLLIKTLSPAHL-INKLLSTSNVITDQTVNICIFYDRDDV 285

Query: 359 FP--NDKCERPSSISYTYSRSLVQACSDGDVKTVKKLL 394
               NDK ++  S  +        A   G ++ VK LL
Sbjct: 286 LEIINDKGKQYDSTDFK------MAVEVGSIRCVKYLL 317

Length = 446

>gnl|CDD|223738 COG0666, Arp, FOG: Ankyrin repeat [General function prediction only]

 Score = 40.2 bits (93), Expect = 0.002
 Identities = 48/225 (21%), Positives = 77/225 (34%), Gaps = 56/225 (24%)

Query: 235 HEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESAL 294
             A++ +L    +N  D   N +  L    +A       +L           +      L
Sbjct: 20  LVALLLLLSLDLSNPSDKKLNLYLELALLPAASLSE--LLLKLIVDRHLAARDLDGRLPL 77

Query: 295 TLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGH-----VEVAKLLLDSGAQS 349
             A  KG   +V+ LL++GAD   K  +  T L  A+++G+     +EVAKLLL++GA  
Sbjct: 78  HSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADL 137

Query: 350 VSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGES 409
                       D+                                          +G +
Sbjct: 138 ------DVNNLRDE------------------------------------------DGNT 149

Query: 410 LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQ 454
            L  A   G  ++ ++LL   A+   R   G  T L  AA +GR 
Sbjct: 150 PLHWAALNGDADIVELLLEAGADPNSRNSYGV-TALDPAAKNGRI 193

Length = 235

>gnl|CDD|197603 smart00248, ANK, ankyrin repeats

 Score = 36.0 bits (84), Expect = 0.002
 Identities = 15/27 (55%), Positives = 21/27 (77%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHA 557
           TPL  AA+ G+LE+V+ LLD GA ++A
Sbjct: 4   TPLHLAAENGNLEVVKLLLDKGADINA 30

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure. Length = 30

>gnl|CDD|165108 PHA02741, PHA02741, hypothetical protein; Provisional

 Score = 39.3 bits (91), Expect = 0.002
 Identities = 26/88 (29%), Positives = 37/88 (42%), Gaps = 2/88 (2%)

Query: 203 IEIVRLLINHGADVNGQSS-SGNTPLMYACAGGHEAVVRVLL-ECGANVEDHNENGHTPL 260
            EI+  LI  GAD+N Q    G+T L  A       +   L  + G ++   N +  +P 
Sbjct: 77  AEIIDHLIELGADINAQEMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPF 136

Query: 261 MEAASAGHVGVAKILLEYGAGINTHSNE 288
             A     V + +IL E  A     SNE
Sbjct: 137 ELAIDNEDVAMMQILREIVATSRGFSNE 164

Length = 169

>gnl|CDD|140343 PTZ00322, PTZ00322, 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

 Score = 40.3 bits (94), Expect = 0.003
 Identities = 30/99 (30%), Positives = 42/99 (42%), Gaps = 5/99 (5%)

Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---- 649
           L + A  G A   ++LL      + +   G T L  AC NGH  V  +LL +GA+     
Sbjct: 86  LCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLD 145

Query: 650 -DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSD 687
            D  T L  A + G   VVQLL    +       ++  D
Sbjct: 146 KDGKTPLELAEENGFREVVQLLSRHSQCHFELGANAKPD 184

Length = 664

>gnl|CDD|222277 pfam13637, Ank_4, Ankyrin repeats (many copies)

 Score = 35.7 bits (83), Expect = 0.004
 Identities = 21/53 (39%), Positives = 31/53 (58%), Gaps = 5/53 (9%)

Query: 501 TALTLACCGGFLDVADFLLKNGANI----ELGASTPLMEAAQEGHLELVRYLL 549
           TAL  A   G L++  +LL+ G +I    E G  T L  AA+ G+LE+++ LL
Sbjct: 3   TALHKAAISGRLELVKYLLEKGVDINRTDEDGN-TALHIAAENGNLEVLKLLL 54

Length = 54

>gnl|CDD|222954 PHA02989, PHA02989, ankyrin repeat protein; Provisional

 Score = 40.1 bits (94), Expect = 0.004
 Identities = 73/342 (21%), Positives = 141/342 (41%), Gaps = 84/342 (24%)

Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGH---LDMVRFLLSAGADQEHKTDEMHTAL-- 327
           + LL  G  +N    E++ +++ L   K     + +V+ L+  GAD  +K   + T L  
Sbjct: 20  EFLLRTGFDVNE---EYRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIETPLCA 75

Query: 328 ----MEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSS--ISYTYSRSLVQA 381
                E + +   ++ KLLL  GA             N K     S  + + Y+ ++   
Sbjct: 76  VLRNREITSNKIKKIVKLLLKFGADI-----------NLKTFNGVSPIVCFIYNSNI--- 121

Query: 382 CSDGDVKTVKKLLTEGRSVHETTD-EGESLLSLACSAGYYE-------LAQVLLAMHANV 433
               +   ++ LL++G +V++  +  G +LL +     Y E       + ++LL+   N+
Sbjct: 122 ---NNCDMLRFLLSKGINVNDVKNSRGYNLLHM-----YLESFSVKKDVIKILLSFGVNL 173

Query: 434 EDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINA 493
            ++      TP+                + Y R+D   +  S+  ++   ++  G  I  
Sbjct: 174 FEKTSLYGLTPM----------------NIYLRNDI--DVISIKVIK--YLIKKGVNIET 213

Query: 494 HTEETQETALTLACCGGFLD-----------VADFLLK--NGANIELGASTPLMEAAQEG 540
           +     E+ L       FLD           V +F+LK       +     PL+ +A+  
Sbjct: 214 NNN-GSESVLE-----SFLDNNKILSKKEFKVLNFILKYIKINKKDKKGFNPLLISAKVD 267

Query: 541 HLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLL 582
           + E   YLL  G  ++  ++ GDT LTYA ++G+ D+ + +L
Sbjct: 268 NYEAFNYLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRIL 309

Length = 494

>gnl|CDD|205784 pfam13606, Ank_3, Ankyrin repeat

 Score = 35.3 bits (82), Expect = 0.004
 Identities = 15/27 (55%), Positives = 21/27 (77%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHA 557
           TPL  AA+ G+LELV+ LL+ GA ++A
Sbjct: 4   TPLHLAARNGNLELVKLLLEHGADINA 30

Ankyrins are multifunctional adaptors that link specific proteins to the membrane-associated, spectrin- actin cytoskeleton. This repeat-domain is a 'membrane-binding' domain of up to 24 repeated units, and it mediates most of the protein's binding activities. Length = 30

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	739
KOG4177|consensus	1143		100.0
KOG4177|consensus	1143		100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02876	682	ankyrin repeat protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02917	661	ankyrin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02946	446	ankyin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02730	672	ankyrin-like protein; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
PHA02716	764	CPXV016; CPX019; EVM010; Provisional	100.0
KOG0510|consensus	929		100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
KOG0510|consensus	929		100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA02874	434	ankyrin repeat protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
PHA03100	480	ankyrin repeat protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA03095	471	ankyrin-like protein; Provisional	100.0
PHA02792	631	ankyrin-like protein; Provisional	100.0
PHA02878	477	ankyrin repeat protein; Provisional	100.0
PHA02791	284	ankyrin-like protein; Provisional	100.0
KOG4412|consensus	226		100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02875	413	ankyrin repeat protein; Provisional	100.0
PHA02989	494	ankyrin repeat protein; Provisional	100.0
KOG4412|consensus	226		100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG0508|consensus	615		100.0
PHA02798	489	ankyrin-like protein; Provisional	100.0
KOG0509|consensus	600		100.0
KOG0509|consensus	600		100.0
KOG4369|consensus	2131		100.0
KOG4369|consensus	2131		99.97
PHA02795	437	ankyrin-like protein; Provisional	99.97
PHA02859	209	ankyrin repeat protein; Provisional	99.96
PHA02859	209	ankyrin repeat protein; Provisional	99.95
PHA02795	437	ankyrin-like protein; Provisional	99.95
KOG0502|consensus	296		99.94
KOG0507|consensus	854		99.93
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.93
KOG0502|consensus	296		99.92
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.91
TIGR00870	743	trp transient-receptor-potential calcium channel p	99.9
KOG0507|consensus	854		99.9
KOG0505|consensus	527		99.9
PLN03192	823	Voltage-dependent potassium channel; Provisional	99.89
KOG0514|consensus	452		99.86
KOG0514|consensus	452		99.85
PHA02743	166	Viral ankyrin protein; Provisional	99.85
PHA02743	166	Viral ankyrin protein; Provisional	99.84
PHA02884	300	ankyrin repeat protein; Provisional	99.84
KOG0505|consensus	527		99.83
PHA02884	300	ankyrin repeat protein; Provisional	99.82
PHA02741	169	hypothetical protein; Provisional	99.82
PHA02741	169	hypothetical protein; Provisional	99.8
PHA02736	154	Viral ankyrin protein; Provisional	99.8
KOG0512|consensus	228		99.79
KOG0512|consensus	228		99.79
KOG0195|consensus	448		99.77
PHA02736	154	Viral ankyrin protein; Provisional	99.76
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.73
KOG3676|consensus	782		99.73
KOG3676|consensus	782		99.7
PF12796	89	Ank_2: Ankyrin repeats (3 copies); InterPro: IPR02	99.69
KOG0195|consensus	448		99.68
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.65
cd00204	126	ANK ankyrin repeats; ankyrin repeats mediate prote	99.6
KOG4214|consensus	117		99.56
KOG4214|consensus	117		99.53
KOG1710|consensus	396		99.51
KOG1710|consensus	396		99.49
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.44
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.42
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.39
COG0666	235	Arp FOG: Ankyrin repeat [General function predicti	99.39
PF13637	54	Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A	99.37
PF13857	56	Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A	99.37
KOG0515|consensus	752		99.35
KOG0515|consensus	752		99.32
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.25
PTZ00322	664	6-phosphofructo-2-kinase/fructose-2,6-biphosphatas	99.23
PF13606	30	Ank_3: Ankyrin repeat	99.01
PF13606	30	Ank_3: Ankyrin repeat	99.0
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.87
PF00023	33	Ank: Ankyrin repeat Hereditary spherocytosis; Inte	98.84
KOG0511|consensus	516		98.67
KOG0783|consensus	1267		98.67
KOG0782|consensus	1004		98.67
KOG0782|consensus	1004		98.64
KOG0506|consensus	622		98.63
KOG0783|consensus	1267		98.62
KOG0506|consensus	622		98.61
KOG0818|consensus	669		98.6
KOG0818|consensus	669		98.59
KOG3609|consensus	822		98.45
KOG3609|consensus	822		98.43
KOG0511|consensus	516		98.35
KOG0705|consensus	749		98.32
KOG0522|consensus	560		98.27
KOG0705|consensus	749		98.24
KOG2384|consensus	223		98.22
KOG0522|consensus	560		98.19
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	97.77
KOG0521|consensus	785		97.76
KOG2384|consensus	223		97.7
PF03158	192	DUF249: Multigene family 530 protein; InterPro: IP	97.64
KOG0521|consensus	785		97.52
KOG0520|consensus	975		97.37
KOG0520|consensus	975		97.16
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	97.13
smart00248	30	ANK ankyrin repeats. Ankyrin repeats are about 33	97.12
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	96.77
PF06128	284	Shigella_OspC: Shigella flexneri OspC protein; Int	96.74
KOG2505|consensus	591		96.74
KOG2505|consensus	591		96.59
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	94.1
PF11929	76	DUF3447: Domain of unknown function (DUF3447); Int	93.46
PLN03077	857	Protein ECB2; Provisional	89.58
PLN03081	697	pentatricopeptide (PPR) repeat-containing protein;	89.15
PLN03218	1060	maturation of RBCL 1; Provisional	88.45
PLN03218	1060	maturation of RBCL 1; Provisional	87.76
PLN03081	697	pentatricopeptide (PPR) repeat-containing protein;	83.8
PLN03077	857	Protein ECB2; Provisional	83.59

>KOG4177|consensus

Probab=100.00  E-value=2.4e-63  Score=517.19  Aligned_cols=594  Identities=32%  Similarity=0.409  Sum_probs=496.1

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      .|+.|++.||.+.++.|++.....+.....|.||||+|+-+|+.+++++|++.|+.++.....+. ||||.|+..|    
T Consensus        24 ~l~~a~r~~~~~~~~~l~~~e~~~~~~sk~~~~pl~~aa~~~~~~v~~~ll~~~a~v~~~~~~~~-~plh~a~~~~----   98 (1143)
T KOG4177|consen   24 ALHIAARNDDTNAAKLLLQNEHNADVDSKSGFTPLHIAAHYGNENVAELLLNRGAIVNATARNGI-TPLHVASKRG----   98 (1143)
T ss_pred             HHHHHHhccchhhcccccccccccchhcccccCHHHHHhhhhhhhhhhhhhccccccCcccccCc-cHHHHHHhhc----
Confidence            48999999999999999997666665666899999999999999999999999999998887775 9999999999    


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL  160 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L  160 (739)
                              +.++++.+......             ....+..+.|+||.|+..|+.+++..|++.+++++.++..|.||+
T Consensus        99 --------~a~~v~~ll~~ga~-------------~~~~~~~~lTpLh~aa~~g~~~~~~~ll~~~a~~~~k~~~g~t~l  157 (1143)
T KOG4177|consen   99 --------DAEMVKLLLCRGAQ-------------IDARDRDGLTPLHCAARKGHVQVIELLLQHGAPINIKTKNGLSPL  157 (1143)
T ss_pred             --------chhHHHHHHhccCc-------------hhhcccCCCcchhhhcccccHHHHHHHHHccCCCcccccCCCCch
Confidence                    55555555444322             223456788999999999999999999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHH
Q psy903          161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR  240 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~  240 (739)
                      ++|+.   ...++++.++..      ..  +-+++.|...++.++++.++...++++..+.++.||+|.|+..+..++++
T Consensus       158 ~~a~~---~~~~~ll~~~~~------~d--~l~~~~~~~~~~~~~~~ll~~~~~~~~a~~~~~~tpl~~a~~~nri~~~e  226 (1143)
T KOG4177|consen  158 HMAAQ---VACARLLLEYKA------PD--YLRLHVAAHCGHARVAKLLLDKKADPNASALNGFTPLHIACKKNRIKVVE  226 (1143)
T ss_pred             hhhcc---hhhhHHhhhccc------ch--hhhhhHHhhcchHHHHhhhhcccCCccccccCCCCchhhhccccccceee
Confidence            99998   777777777765      11  12779999999999999999999999999999999999999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy903          241 VLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKT  320 (739)
Q Consensus       241 ~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~  320 (739)
                      +++.+|+++...|..|.||+|.|+..|+++++.+++.+|+..+.. +..+.||+|.|+..+..+++++|+++|+++....
T Consensus       227 Lll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~~l~~~ga~~~~~-~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~  305 (1143)
T KOG4177|consen  227 LLLKHGADVSAKDESGLTPLHVAAFMGHLDIVKLLLQHGASVNVS-TVRGETPLHMAARAGQVEVCKLLLQNGADVLAKA  305 (1143)
T ss_pred             eeeeccCcCCcccccCccHHHHHHhccchhHHHHHHhcccccCcc-cccccCcchhhhccchhhhHhhhhccCccccccc
Confidence            999999999999999999999999999999999999999998875 4458999999999999999999999999999999


Q ss_pred             CcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCC
Q psy903          321 DEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSV  400 (739)
Q Consensus       321 ~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~  400 (739)
                      ....++++.+...++.++++++++.++.+.                  .......++++.++..+..++..++...+..-
T Consensus       306 ~~~kt~l~~a~~~g~~~i~~~~l~~~~~~~------------------aar~~g~t~lHlaa~~~~~~~~~~l~~~~~~~  367 (1143)
T KOG4177|consen  306 RDDQTPLHIASRLGHEEIVHLLLQAGATPN------------------AARTAGYTPLHLAAKEGQVEVAGALLEHGAQR  367 (1143)
T ss_pred             ccccChhhhhcccchHHHHHHHhhccCCcc------------------ccCcCCcccccHhhhhhhHHHHHHhhcccccc
Confidence            999999999999999999999999877643                  23344556788888888888888888888877


Q ss_pred             ccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccch
Q psy903          401 HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQ  480 (739)
Q Consensus       401 ~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  480 (739)
                      ....+.+.+|++.|+..++.++++.++..|++++.....                                         
T Consensus       368 ~~a~~k~~~pl~la~~~g~~~~v~Lll~~ga~~~~~gk~-----------------------------------------  406 (1143)
T KOG4177|consen  368 RQAEEKGFTPLHLAVKSGRVSVVELLLEAGADPNSAGKN-----------------------------------------  406 (1143)
T ss_pred             CcccccCCcchhhhcccCchhHHHhhhhccCCcccCCCC-----------------------------------------
Confidence            778888999999999999999999999988885555433                                         


Q ss_pred             hhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCCCCC---CCCcHHHHHHHcC-cHHHHHHHHHCCCCCC
Q psy903          481 ASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEG-HLELVRYLLDSGAQVH  556 (739)
Q Consensus       481 ~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~---~~~t~L~~A~~~~-~~~~v~~Ll~~g~~~~  556 (739)
                                        +.||||.++..++..+++.++++|++++.   .|.||+|+|+..| ..++...+++.|.+++
T Consensus       407 ------------------gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG~T~lhvaa~~g~~~~~~~~l~~~g~~~n  468 (1143)
T KOG4177|consen  407 ------------------GVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLGYTPLHVAAKKGRYLQIARLLLQYGADPN  468 (1143)
T ss_pred             ------------------CcceeeehhhccCcceEEEEeccCCChhhHhhcCCChhhhhhhcccHhhhhhhHhhcCCCcc
Confidence                              34666666666777777777777777643   5778888888887 7777777778888888


Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC-----CCCcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHH
Q psy903          557 AKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYAC  631 (739)
Q Consensus       557 ~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~-----~~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~  631 (739)
                      ..-..|.||||+|+..|+.++++.|++.++..     .+-+++|.|...+...+++.+++.|++++.++..|.||||.|+
T Consensus       469 ~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~  548 (1143)
T KOG4177|consen  469 AVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDNLDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAV  548 (1143)
T ss_pred             hhccccCcchhhhhccCCchHHHHhhhcCCccCccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHH
Confidence            88888888888888888888888888877433     2667888888888888888888888888888888888888888


Q ss_pred             HcCCHHHHHHHHHcCCC-----CCCchHHHHHHhCCChhHHHHHhcCCCcccCCCCCCCCCCCchhhhccCCCcccccCC
Q psy903          632 ENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKT  706 (739)
Q Consensus       632 ~~~~~~~v~~L~~~~~~-----~~~~~~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  706 (739)
                      ..|+.++|++|+++|++     ..|.||||.|+..|+.+++..|+++++++                         |..|
T Consensus       549 ~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa~~G~~~i~~LLlk~GA~v-------------------------na~d  603 (1143)
T KOG4177|consen  549 HYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAAQQGHNDIAELLLKHGASV-------------------------NAAD  603 (1143)
T ss_pred             hcCCchHHHHhhhCCccccccCCCCCChhhHHHHcChHHHHHHHHHcCCCC-------------------------Cccc
Confidence            88888888888888876     45778888888888888888888877665                         7788


Q ss_pred             CCCchHHHHHHHcCcHHHHHHHHHcCCC
Q psy903          707 QTGDTALTYACENGHTDVADLLLSYGAN  734 (739)
Q Consensus       707 ~~g~t~l~~A~~~~~~~i~~~L~~~ga~  734 (739)
                      .+|.|||++|+..|+++++++|+..|++
T Consensus       604 ~~g~TpL~iA~~lg~~~~~k~l~~~~~~  631 (1143)
T KOG4177|consen  604 LDGFTPLHIAVRLGYLSVVKLLKVVTAT  631 (1143)
T ss_pred             ccCcchhHHHHHhcccchhhHHHhccCc
Confidence            8888888888888888888888888877

>KOG4177|consensus

Probab=100.00  E-value=2.1e-59  Score=487.73  Aligned_cols=561  Identities=34%  Similarity=0.437  Sum_probs=459.2

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      |||.|+.+|..++++.|+..|+.++..+..|-||||.|+..|+.+++++|+..|+.++..+..+. ||||.|+..|    
T Consensus        57 pl~~aa~~~~~~v~~~ll~~~a~v~~~~~~~~~plh~a~~~~~a~~v~~ll~~ga~~~~~~~~~l-TpLh~aa~~g----  131 (1143)
T KOG4177|consen   57 PLHIAAHYGNENVAELLLNRGAIVNATARNGITPLHVASKRGDAEMVKLLLCRGAQIDARDRDGL-TPLHCAARKG----  131 (1143)
T ss_pred             HHHHHhhhhhhhhhhhhhccccccCcccccCccHHHHHHhhcchhHHHHHHhccCchhhcccCCC-cchhhhcccc----
Confidence            68999999999999999999999999999999999999999999999999999999998887775 9999999999    


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL  160 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L  160 (739)
                              ..+++..+.....             .-...+..+.++++.|+.   ...++.+.+...      .+-. ++
T Consensus       132 --------~~~~~~~ll~~~a-------------~~~~k~~~g~t~l~~a~~---~~~~~ll~~~~~------~d~l-~~  180 (1143)
T KOG4177|consen  132 --------HVQVIELLLQHGA-------------PINIKTKNGLSPLHMAAQ---VACARLLLEYKA------PDYL-RL  180 (1143)
T ss_pred             --------cHHHHHHHHHccC-------------CCcccccCCCCchhhhcc---hhhhHHhhhccc------chhh-hh
Confidence                    4444444433321             122344567888888888   666777776644      2222 67


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHH
Q psy903          161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR  240 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~  240 (739)
                      +.|...++.+++++|+...++.+.....+ .||+|.|+..+..+++++++.+|+++...|..|.||||.|++.|+.+++.
T Consensus       181 ~~~~~~~~~~~~~ll~~~~~~~~a~~~~~-~tpl~~a~~~nri~~~eLll~~gadv~a~d~~gl~~lh~a~~~g~~~i~~  259 (1143)
T KOG4177|consen  181 HVAAHCGHARVAKLLLDKKADPNASALNG-FTPLHIACKKNRIKVVELLLKHGADVSAKDESGLTPLHVAAFMGHLDIVK  259 (1143)
T ss_pred             hHHhhcchHHHHhhhhcccCCccccccCC-CCchhhhccccccceeeeeeeccCcCCcccccCccHHHHHHhccchhHHH
Confidence            88888899999999998888887766554 59999999999999999999999999999999999999999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy903          241 VLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKT  320 (739)
Q Consensus       241 ~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~  320 (739)
                      +|+.+|+.++..+..|.||+|.|+..+..++.++|+++|+++...... ..++++.|...|..++++++++.++.++..+
T Consensus       260 ~l~~~ga~~~~~~vr~~tplh~AA~~~~~e~~~~ll~~ga~~~~~~~~-~kt~l~~a~~~g~~~i~~~~l~~~~~~~aar  338 (1143)
T KOG4177|consen  260 LLLQHGASVNVSTVRGETPLHMAARAGQVEVCKLLLQNGADVLAKARD-DQTPLHIASRLGHEEIVHLLLQAGATPNAAR  338 (1143)
T ss_pred             HHHhcccccCcccccccCcchhhhccchhhhHhhhhccCccccccccc-ccChhhhhcccchHHHHHHHhhccCCccccC
Confidence            999999999999999999999999999999999999999888775444 7899999999999999999999999999888


Q ss_pred             CcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCC
Q psy903          321 DEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSV  400 (739)
Q Consensus       321 ~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~  400 (739)
                      ..+.+++|.++..++.++..++...+......                  .....++++.++..+..+.++.++..|.++
T Consensus       339 ~~g~t~lHlaa~~~~~~~~~~l~~~~~~~~~a------------------~~k~~~pl~la~~~g~~~~v~Lll~~ga~~  400 (1143)
T KOG4177|consen  339 TAGYTPLHLAAKEGQVEVAGALLEHGAQRRQA------------------EEKGFTPLHLAVKSGRVSVVELLLEAGADP  400 (1143)
T ss_pred             cCCcccccHhhhhhhHHHHHHhhccccccCcc------------------cccCCcchhhhcccCchhHHHhhhhccCCc
Confidence            89999999999998888888887766653322                  223345688899999999999999999999


Q ss_pred             ccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccch
Q psy903          401 HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQ  480 (739)
Q Consensus       401 ~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  480 (739)
                      +.....|.||+|.++.+++.++++.+++++++.+..+..+ .                                      
T Consensus       401 ~~~gk~gvTplh~aa~~~~~~~v~l~l~~gA~~~~~~~lG-~--------------------------------------  441 (1143)
T KOG4177|consen  401 NSAGKNGVTPLHVAAHYGNPRVVKLLLKRGASPNAKAKLG-Y--------------------------------------  441 (1143)
T ss_pred             ccCCCCCcceeeehhhccCcceEEEEeccCCChhhHhhcC-C--------------------------------------
Confidence            9999999999999999999999999999999888776655 4                                      


Q ss_pred             hhhhhccCccccccCcCCCCCHHHHHHhcC-CHHHHHHHHHcCCCCCC---CCCcHHHHHHHcCcHHHHHHHHHCCCCCC
Q psy903          481 ASVILIPGAKINAHTEETQETALTLACCGG-FLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVH  556 (739)
Q Consensus       481 ~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~-~~~~v~~Ll~~~~~~~~---~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~  556 (739)
                                          |++|.|+..| ..++...+++.|.+++.   .|.||||.|+..|+.++++.|++.++..+
T Consensus       442 --------------------T~lhvaa~~g~~~~~~~~l~~~g~~~n~~s~~G~T~Lhlaaq~Gh~~~~~llle~~~~~~  501 (1143)
T KOG4177|consen  442 --------------------TPLHVAAKKGRYLQIARLLLQYGADPNAVSKQGFTPLHLAAQEGHTEVVQLLLEGGANDN  501 (1143)
T ss_pred             --------------------ChhhhhhhcccHhhhhhhHhhcCCCcchhccccCcchhhhhccCCchHHHHhhhcCCccC
Confidence                                5555555555 55666666677776644   57788888888888888888888877777


Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC-----CCcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHH
Q psy903          557 AKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYAC  631 (739)
Q Consensus       557 ~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~-----~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~  631 (739)
                      .....|-+++|.+...+...+++.++++|++.+     +.||||.|+.+|++++||+|+++|++++.+++.|+||||.|+
T Consensus       502 ~~~~~~l~~lhla~~~~~v~~~~~l~~~ga~v~~~~~r~~TpLh~A~~~g~v~~VkfLLe~gAdv~ak~~~G~TPLH~Aa  581 (1143)
T KOG4177|consen  502 LDAKKGLTPLHLAADEDTVKVAKILLEHGANVDLRTGRGYTPLHVAVHYGNVDLVKFLLEHGADVNAKDKLGYTPLHQAA  581 (1143)
T ss_pred             ccchhccchhhhhhhhhhHHHHHHHhhcCCceehhcccccchHHHHHhcCCchHHHHhhhCCccccccCCCCCChhhHHH
Confidence            777778888888888888888888888887664     567888888888888888888888888888888888888888


Q ss_pred             HcCCHHHHHHHHHcCCC-----CCCchHHHHHHhCCChhHHHHHhcCCCc
Q psy903          632 ENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQLLLDFPRS  676 (739)
Q Consensus       632 ~~~~~~~v~~L~~~~~~-----~~~~~~L~~A~~~g~~~~v~~L~~~~~~  676 (739)
                      ..|+.+|+.+|+++|++     .+|.|||+.|++.|++++++.|+..+..
T Consensus       582 ~~G~~~i~~LLlk~GA~vna~d~~g~TpL~iA~~lg~~~~~k~l~~~~~~  631 (1143)
T KOG4177|consen  582 QQGHNDIAELLLKHGASVNAADLDGFTPLHIAVRLGYLSVVKLLKVVTAT  631 (1143)
T ss_pred             HcChHHHHHHHHHcCCCCCcccccCcchhHHHHHhcccchhhHHHhccCc
Confidence            88888888888888875     3577888888888888888888776544

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=6.9e-54  Score=462.31  Aligned_cols=497  Identities=22%  Similarity=0.203  Sum_probs=327.7

Q ss_pred             hhhhhhcCCH-HHHHHHH-----HcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhc
Q psy903            2 LVQACSDGDV-KTVKKLL-----TEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS   75 (739)
Q Consensus         2 L~~A~~~g~~-~~v~~ll-----~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~   75 (739)
                      |+.|+..|+. +++..+.     .+|++...++..+.||||.|+..|+.|+|+.|++.++++....+..|.||||+|+..
T Consensus         6 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~   85 (682)
T PHA02876          6 LYRIMCRGNCIDILSAIDNYDLHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICII   85 (682)
T ss_pred             HHHHHhcCchHHHHHHHHHHHHhhhhhhhcccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCC
Confidence            7788888877 4344333     357777778889999999999999999999999999986555555566999999987


Q ss_pred             cccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCC
Q psy903           76 GFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDE  155 (739)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~  155 (739)
                      +..  +...........                         .....+.+.+..+-.......++.+-+..         
T Consensus        86 ~~~--~~~~~~l~~~~~-------------------------~~~~~~~~~~~~~~~~~~~~~~~il~~~~---------  129 (682)
T PHA02876         86 PNV--MDIVISLTLDCD-------------------------IILDIKYASIILNKHKLDEACIHILKEAI---------  129 (682)
T ss_pred             CCc--cccccccccchh-------------------------hcccccHHHHHHHHHHHHHHHHHHHHHHh---------
Confidence            621  110000000000                         00000111111111111111111111110         


Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCc
Q psy903          156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH  235 (739)
Q Consensus       156 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~  235 (739)
                      ..+.++++...+..+                   ..++++.|+..++.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus       130 ~~~~~~~~~~~~~~~-------------------~~~~l~~~i~~~~~~i~k~Ll~~Gadvn~~d~~G~TpLh~Aa~~G~  190 (682)
T PHA02876        130 SGNDIHYDKINESIE-------------------YMKLIKERIQQDELLIAEMLLEGGADVNAKDIYCITPIHYAAERGN  190 (682)
T ss_pred             cCCcccHHhhccchh-------------------hhHHHHHHHHCCcHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCC
Confidence            001122222222211                   1256677777777777777777777777777777777777777777


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy903          236 EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD  315 (739)
Q Consensus       236 ~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~  315 (739)
                      .++|++|+++|++++..+..|.|||+.|+..++.+++++|++.+..+..     +.++++.|+..++.+.+++|++.|++
T Consensus       191 ~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~~-----~~~~L~~ai~~~~~~~~~~Ll~~g~~  265 (682)
T PHA02876        191 AKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNINK-----NDLSLLKAIRNEDLETSLLLYDAGFS  265 (682)
T ss_pred             HHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCC-----CcHHHHHHHHcCCHHHHHHHHHCCCC
Confidence            7777777777777777777777777777777777777777777665433     34677777777777777777777777


Q ss_pred             CCCCCCcCCcHHHHHHhCCch-HHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHH
Q psy903          316 QEHKTDEMHTALMEASMDGHV-EVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLL  394 (739)
Q Consensus       316 ~~~~~~~~~~~l~~a~~~~~~-~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll  394 (739)
                      ++..+..|.||||+|+..++. +++++|++                                                  
T Consensus       266 vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~--------------------------------------------------  295 (682)
T PHA02876        266 VNSIDDCKNTPLHHASQAPSLSRLVPKLLE--------------------------------------------------  295 (682)
T ss_pred             CCCCCCCCCCHHHHHHhCCCHHHHHHHHHH--------------------------------------------------
Confidence            777777777777777766554 34444443                                                  


Q ss_pred             HCCCCCccCCCCCCCHHHHHHHcC-cHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCC
Q psy903          395 TEGRSVHETTDEGESLLSLACSAG-YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPND  473 (739)
Q Consensus       395 ~~~~~~~~~~~~~~t~l~~a~~~~-~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~  473 (739)
                       .|.+++..+..|.||||+|+..| ..+++++|+..|++++..+..+                                 
T Consensus       296 -~gadin~~d~~g~TpLh~Aa~~g~~~~~v~~Ll~~gadin~~d~~g---------------------------------  341 (682)
T PHA02876        296 -RGADVNAKNIKGETPLYLMAKNGYDTENIRTLIMLGADVNAADRLY---------------------------------  341 (682)
T ss_pred             -CCCCCCCcCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCCCCcccCC---------------------------------
Confidence             34445556666777777777766 4677777777766665544333                                 


Q ss_pred             cccccchhhhhhccCccccccCcCCCCCHHHHHHhc-CCHHHHHHHHHcCCCCC---CCCCcHHHHHHHcCcHHHHHHHH
Q psy903          474 KSVNGLQASVILIPGAKINAHTEETQETALTLACCG-GFLDVADFLLKNGANIE---LGASTPLMEAAQEGHLELVRYLL  549 (739)
Q Consensus       474 ~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~-~~~~~v~~Ll~~~~~~~---~~~~t~L~~A~~~~~~~~v~~Ll  549 (739)
                                                .||||+|+.. +..++++.|++.|++++   ..|.||||+|+..++.+++++|+
T Consensus       342 --------------------------~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll  395 (682)
T PHA02876        342 --------------------------ITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLL  395 (682)
T ss_pred             --------------------------CcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHH
Confidence                                      2444444432 34566666777766653   35778888888888888888888


Q ss_pred             HCCCCCCCCCCCCCcHHHHHHHcCc-HHHHHHHHhCCCCCC-----CCcHHHHHHHcC-CHHHHHHHhhCCCCCCcCCCC
Q psy903          550 DSGAQVHAKTQTGDTALTYACENGH-TDVADLLLSYGANLD-----NSTMLIEAAKGG-HANVVQLLLDFPRSVHAKTQT  622 (739)
Q Consensus       550 ~~g~~~~~~d~~g~t~l~~A~~~~~-~~iv~~Ll~~~~~~~-----~~~~l~~A~~~~-~~~~v~~L~~~~~~~~~~~~~  622 (739)
                      ++|++++..+..|.||||+|+..++ ..++++|+++|++++     |.||||.|+..+ +.+++++|+++|++++.+|..
T Consensus       396 ~~gad~~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~  475 (682)
T PHA02876        396 DYGADIEALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQ  475 (682)
T ss_pred             HCCCCccccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCC
Confidence            8888888888888888888876554 456778888777653     778888888766 688999999999999999999


Q ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCCCchHHHHHHhCCChhHHHHHh
Q psy903          623 GDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLL  671 (739)
Q Consensus       623 g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~L~~A~~~g~~~~v~~L~  671 (739)
                      |.||+++|+..+  ++++.|+.+|++..+.+.++.... .....+++++
T Consensus       476 g~tpl~~a~~~~--~~v~~Ll~~~a~~~~~~~~~~~~~-~~~~~~~~~i  521 (682)
T PHA02876        476 NQYPLLIALEYH--GIVNILLHYGAELRDSRVLHKSLN-DNMFSFRYII  521 (682)
T ss_pred             CCCHHHHHHHhC--CHHHHHHHCCCCCCcCcchHHHhc-ccHHHHHHHH
Confidence            999999999866  589999999998887776665543 3344444443

>PHA02876 ankyrin repeat protein; Provisional

Probab=100.00  E-value=9.4e-51  Score=438.02  Aligned_cols=465  Identities=23%  Similarity=0.271  Sum_probs=361.0

Q ss_pred             HHHHHHcCCHHHHHH------HHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHc
Q psy903          127 LVQACSDGDVKTVKK------LLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS  200 (739)
Q Consensus       127 l~~A~~~~~~~~~~~------ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~  200 (739)
                      |+.++..|+.+-+-.      |+..|++....+..+.||||.|+..|+.++|+.|++.+++.....+..|.||||+|+..
T Consensus         6 l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~LH~A~~~g~~e~V~~ll~~~~~~~~~~~~~~~tpLh~a~~~   85 (682)
T PHA02876          6 LYRIMCRGNCIDILSAIDNYDLHKHGANQCENESIPFTAIHQALQLRQIDIVEEIIQQNPELIYITDHKCHSTLHTICII   85 (682)
T ss_pred             HHHHHhcCchHHHHHHHHHHHHhhhhhhhcccccccchHHHHHHHHHhhhHHHHHHHhCcccchhhchhhccccccccCC
Confidence            556666666543222      33456676777788999999999999999999999999887677777788999999988


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHC--CCCCCC----CCCCCCcHHHHHHhcCChHHHHH
Q psy903          201 GFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC--GANVED----HNENGHTPLMEAASAGHVGVAKI  274 (739)
Q Consensus       201 ~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~--~~~~~~----~~~~~~t~L~~A~~~~~~~ii~~  274 (739)
                      ++..  ..++......+.....+.+....+.......++..|-+.  +.++..    ......++++.++..++.+++++
T Consensus        86 ~~~~--~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~il~~~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~i~k~  163 (682)
T PHA02876         86 PNVM--DIVISLTLDCDIILDIKYASIILNKHKLDEACIHILKEAISGNDIHYDKINESIEYMKLIKERIQQDELLIAEM  163 (682)
T ss_pred             CCcc--ccccccccchhhcccccHHHHHHHHHHHHHHHHHHHHHHhcCCcccHHhhccchhhhHHHHHHHHCCcHHHHHH
Confidence            8743  333322222222333344444433333333333333332  222211    11233568889999999999999


Q ss_pred             HHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhc
Q psy903          275 LLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYA  354 (739)
Q Consensus       275 Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~  354 (739)
                      |++.|++++.. +..|.||||+|+..|+.++|++|+++|++++..+..|.+||+.|+..++.+++++|++.+....    
T Consensus       164 Ll~~Gadvn~~-d~~G~TpLh~Aa~~G~~~iv~~LL~~Gad~n~~~~~g~t~L~~A~~~~~~~ivk~Ll~~~~~~~----  238 (682)
T PHA02876        164 LLEGGADVNAK-DIYCITPIHYAAERGNAKMVNLLLSYGADVNIIALDDLSVLECAVDSKNIDTIKAIIDNRSNIN----  238 (682)
T ss_pred             HHhCCCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCccCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCC----
Confidence            99999999875 4569999999999999999999999999999999999999999999999999999998765432    


Q ss_pred             ccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcH-HHHHHHHHcCCCc
Q psy903          355 RHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYY-ELAQVLLAMHANV  433 (739)
Q Consensus       355 ~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~-~~v~~Ll~~~~~~  433 (739)
                                        ....+++.|+..++.+.+++|++.|.+++..+..|.||||+|+..++. +++++|++.|+++
T Consensus       239 ------------------~~~~~L~~ai~~~~~~~~~~Ll~~g~~vn~~d~~g~TpLh~Aa~~~~~~~iv~lLl~~gadi  300 (682)
T PHA02876        239 ------------------KNDLSLLKAIRNEDLETSLLLYDAGFSVNSIDDCKNTPLHHASQAPSLSRLVPKLLERGADV  300 (682)
T ss_pred             ------------------CCcHHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCHHHHHHHHHHCCCCC
Confidence                              112468889999999999999999999999999999999999999886 6899999999887


Q ss_pred             ccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcC-CH
Q psy903          434 EDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGG-FL  512 (739)
Q Consensus       434 ~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~-~~  512 (739)
                      +..+..                                                           |.||||.|+..| ..
T Consensus       301 n~~d~~-----------------------------------------------------------g~TpLh~Aa~~g~~~  321 (682)
T PHA02876        301 NAKNIK-----------------------------------------------------------GETPLYLMAKNGYDT  321 (682)
T ss_pred             CCcCCC-----------------------------------------------------------CCCHHHHHHHhCCCH
Confidence            765543                                                           346666666666 47


Q ss_pred             HHHHHHHHcCCCCCC---CCCcHHHHHHHc-CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC
Q psy903          513 DVADFLLKNGANIEL---GASTPLMEAAQE-GHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL  588 (739)
Q Consensus       513 ~~v~~Ll~~~~~~~~---~~~t~L~~A~~~-~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~  588 (739)
                      ++++.|+..|++++.   .|.||||+|+.. ++.+++++|++.|++++.+|..|.||||+|+..++.+++++|+++|+++
T Consensus       322 ~~v~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~iv~lLl~~gadin~~d~~G~TpLh~Aa~~~~~~iv~~Ll~~gad~  401 (682)
T PHA02876        322 ENIRTLIMLGADVNAADRLYITPLHQASTLDRNKDIVITLLELGANVNARDYCDKTPIHYAAVRNNVVIINTLLDYGADI  401 (682)
T ss_pred             HHHHHHHHcCCCCCCcccCCCcHHHHHHHhCCcHHHHHHHHHcCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence            889999999888744   578999999885 4788899999999999999999999999999999999999999998876


Q ss_pred             C-----CCcHHHHHHHcCC-HHHHHHHhhCCCCCCcCCCCCCcHHHHHHHcC-CHHHHHHHHHcCCCC-----CCchHHH
Q psy903          589 D-----NSTMLIEAAKGGH-ANVVQLLLDFPRSVHAKTQTGDTALTYACENG-HTDVADLLLSYGANL-----DNSTMLI  656 (739)
Q Consensus       589 ~-----~~~~l~~A~~~~~-~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~~~-~~~~v~~L~~~~~~~-----~~~~~L~  656 (739)
                      +     +.||||.|+..++ ..++++|++.|++++.+|..|+||||+|+..| +.+++++|+++|++.     .|.|||+
T Consensus       402 ~~~~~~g~T~Lh~A~~~~~~~~~vk~Ll~~gadin~~d~~G~TpLh~Aa~~~~~~~iv~lLl~~Gad~n~~d~~g~tpl~  481 (682)
T PHA02876        402 EALSQKIGTALHFALCGTNPYMSVKTLIDRGANVNSKNKDLSTPLHYACKKNCKLDVIEMLLDNGADVNAINIQNQYPLL  481 (682)
T ss_pred             cccCCCCCchHHHHHHcCCHHHHHHHHHhCCCCCCcCCCCCChHHHHHHHhCCcHHHHHHHHHCCCCCCCCCCCCCCHHH
Confidence            4     6799999987665 56789999999999999999999999999876 689999999988863     5778888


Q ss_pred             HHHhCCChhHHHHHhcCCCcc
Q psy903          657 EAAKGGHANVVQLLLDFPRSV  677 (739)
Q Consensus       657 ~A~~~g~~~~v~~L~~~~~~~  677 (739)
                      .|+..+  .+++.|+.+++..
T Consensus       482 ~a~~~~--~~v~~Ll~~~a~~  500 (682)
T PHA02876        482 IALEYH--GIVNILLHYGAEL  500 (682)
T ss_pred             HHHHhC--CHHHHHHHCCCCC
Confidence            888755  5788888766544

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.3e-50  Score=419.13  Aligned_cols=450  Identities=16%  Similarity=0.145  Sum_probs=272.2

Q ss_pred             HHHHHHHHHcCCCCcccCCCCCcHHHHHHhc---CcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCC
Q psy903           11 VKTVKKLLTEGRSVHETTDEGESLLSLACSA---GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKL   87 (739)
Q Consensus        11 ~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~---~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~   87 (739)
                      ++.|+.|+.+|.+++..|.+|+||||+|+..   |+.++|++|+++|++++..+..|. ||||+|+..|+.++.      
T Consensus        12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~~~g~-TpL~~Aa~~g~~~v~------   84 (661)
T PHA02917         12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKNWRQL-TPLEEYTNSRHVKVN------   84 (661)
T ss_pred             HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccCCCCC-CHHHHHHHcCChhHH------
Confidence            6789999999999999999999999998665   889999999999999998877665 999999998843321      


Q ss_pred             CCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHH--H
Q psy903           88 ADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLAC--S  165 (739)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~--~  165 (739)
                        .+++..+.+.              ....... ....+++.|+..|+.+++++|++.|++++..|..|.||||+|+  .
T Consensus        85 --~~~~~~Ll~~--------------~~~~n~~-~~~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~  147 (661)
T PHA02917         85 --KDIAMALLEA--------------TGYSNIN-DFNIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTD  147 (661)
T ss_pred             --HHHHHHHHhc--------------cCCCCCC-CcchHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHcc
Confidence              1111111111              0000111 1124455566666666666666666666666666666666433  3


Q ss_pred             cCcHHHHHHHHhCCCCccccCC--CCC-----------CcHHHHHHH-----------cCcHHHHHHHHHCCCCCCCCCC
Q psy903          166 AGYYELAQVLLAMHANVEDRGI--KGE-----------CTPLMEAAS-----------SGFIEIVRLLINHGADVNGQSS  221 (739)
Q Consensus       166 ~~~~~~v~~Ll~~~~~~~~~~~--~~~-----------~t~L~~A~~-----------~~~~~~~~~Ll~~g~~~~~~~~  221 (739)
                      .|+.+++++|+++|++++..+.  ..|           .||||+|+.           .++.+++++|+++|++++.+|.
T Consensus       148 ~~~~eivklLi~~Ga~vn~~d~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~  227 (661)
T PHA02917        148 DPVPEIIDLFIENGCSVLYEDEDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDK  227 (661)
T ss_pred             CCCHHHHHHHHHcCCCccccccccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCC
Confidence            5666666666666666654321  112           266666654           2355666666666666666666


Q ss_pred             CCCcHHHHHHhcCcH--HHHHHHHHCCCCCC----CCCCCCCcHHHHHHhc---------CChHHHHHHHHcCCCCcccC
Q psy903          222 SGNTPLMYACAGGHE--AVVRVLLECGANVE----DHNENGHTPLMEAASA---------GHVGVAKILLEYGAGINTHS  286 (739)
Q Consensus       222 ~~~t~L~~A~~~~~~--~~v~~Ll~~~~~~~----~~~~~~~t~L~~A~~~---------~~~~ii~~Ll~~~~~~~~~~  286 (739)
                      .|.||||+|+.+|+.  ++|++|++ |++.+    ..|..+.+|+++|+..         .+.++++.|++.|++.    
T Consensus       228 ~G~TpLh~A~~~g~~~~eivk~Li~-g~d~~~~~~~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~~----  302 (661)
T PHA02917        228 NYCTALQYYIKSSHIDIDIVKLLMK-GIDNTAYSYIDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKPH----  302 (661)
T ss_pred             CCCcHHHHHHHcCCCcHHHHHHHHh-CCcccccccccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCCC----
Confidence            666666666666653  56666653 54443    2334455555555521         1445555555554421    


Q ss_pred             cCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCC
Q psy903          287 NEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCER  366 (739)
Q Consensus       287 ~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~  366 (739)
                         +.++++++...++.++++++++                                ..+.+..                
T Consensus       303 ---~~~~~~~~~~~~~~~~~~~~~~--------------------------------~~~~~~~----------------  331 (661)
T PHA02917        303 ---GIMCSIVPLWRNDKETISLILK--------------------------------TMNSDVL----------------  331 (661)
T ss_pred             ---ceeEeeecccccchHHHHHHHH--------------------------------HhchHHH----------------
Confidence               2244444444444455544442                                1111110                


Q ss_pred             CCCcccccchHHHHHHhcCC--HHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHH-cCCCcccccCCCCCc
Q psy903          367 PSSISYTYSRSLVQACSDGD--VKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLA-MHANVEDRGIKGECT  443 (739)
Q Consensus       367 ~~~~~~~~~~~l~~a~~~~~--~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~t  443 (739)
                              ...+..++..|.  .++++.|++.|++++.++..|.++.    .....+++++|+. .|++....+.. |.|
T Consensus       332 --------~~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~~~----~~~~~~~i~~LL~~~ga~~~~~~~~-G~T  398 (661)
T PHA02917        332 --------QHILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYFRN----INIDSYTMKYLLKKEGGDAVNHLDD-GEI  398 (661)
T ss_pred             --------HHHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccchh----hcCCHHHHHHHHHhcCCCccccCCC-CCC
Confidence                    011333333444  5588888888888888888888744    3567778888887 47776666554 477


Q ss_pred             HHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCC
Q psy903          444 PLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGA  523 (739)
Q Consensus       444 ~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~  523 (739)
                      |||.|++....                                                        +.+...+...+  
T Consensus       399 pL~~a~~~~~~--------------------------------------------------------~~~~~~~~~~~--  420 (661)
T PHA02917        399 PIGHLCKSNYG--------------------------------------------------------CYNFYTYTYKK--  420 (661)
T ss_pred             hhHHHHHhccc--------------------------------------------------------chhhhhhhhhh--
Confidence            77777655432                                                        01111111111  


Q ss_pred             CCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC-----CCcHHHHHH
Q psy903          524 NIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAA  598 (739)
Q Consensus       524 ~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~-----~~~~l~~A~  598 (739)
                           |...  .+...+..+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|++++     |.|||+.|+
T Consensus       421 -----~~~~--~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~Ll~~GAdin~~d~~G~T~L~~A~  493 (661)
T PHA02917        421 -----GLCD--MSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLLLESGSDVNIRSNNGYTCIAIAI  493 (661)
T ss_pred             -----ccch--hhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCCCHHHHHH
Confidence                 1111  1222336788888888888888888888888888888877777777777666553     456666666


Q ss_pred             H-cCCHHHHHHHhhCCCCCCc
Q psy903          599 K-GGHANVVQLLLDFPRSVHA  618 (739)
Q Consensus       599 ~-~~~~~~v~~L~~~~~~~~~  618 (739)
                      . .++.+++++|++++++++.
T Consensus       494 ~~~~~~~iv~~LL~~ga~i~~  514 (661)
T PHA02917        494 NESRNIELLKMLLCHKPTLDC  514 (661)
T ss_pred             HhCCCHHHHHHHHHcCCChhH
Confidence            4 4566777777777666653

>PHA02917 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.4e-48  Score=405.78  Aligned_cols=442  Identities=17%  Similarity=0.194  Sum_probs=318.1

Q ss_pred             HHHHHHHHhcCCCCCcCCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcH----HHHHH
Q psy903          136 VKTVKKLLTEGRSVHETTDEGESLLSLACSA---GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFI----EIVRL  208 (739)
Q Consensus       136 ~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~----~~~~~  208 (739)
                      ++.+++|+.+|..++..|.+|.||||+|+..   |+.++|++|++.|++++..+ ..|+||||+|+..|+.    ++++.
T Consensus        12 ~~~~~~l~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~~~v~~Ll~~ga~v~~~~-~~g~TpL~~Aa~~g~~~v~~~~~~~   90 (661)
T PHA02917         12 LDELKQMLRDRDPNDTRNQFKNNALHAYLFNEHCNNVEVVKLLLDSGTNPLHKN-WRQLTPLEEYTNSRHVKVNKDIAMA   90 (661)
T ss_pred             HHHHHHHHhccCcccccCCCCCcHHHHHHHhhhcCcHHHHHHHHHCCCCccccC-CCCCCHHHHHHHcCChhHHHHHHHH
Confidence            6788999999999998899999999997655   88999999999999998665 4567999999999984    45678


Q ss_pred             HHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHH--hcCChHHHHHHHHcCCCCcccC
Q psy903          209 LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAA--SAGHVGVAKILLEYGAGINTHS  286 (739)
Q Consensus       209 Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~--~~~~~~ii~~Ll~~~~~~~~~~  286 (739)
                      |++.+...+..+.  .++++.|+.+++.+++++|+++|++++.+|..|+|||+.++  ..|+.+++++|+++|++++...
T Consensus        91 Ll~~~~~~n~~~~--~~~~~~a~~~~~~e~vk~Ll~~Gadin~~d~~g~T~L~~~~a~~~~~~eivklLi~~Ga~vn~~d  168 (661)
T PHA02917         91 LLEATGYSNINDF--NIFSYMKSKNVDVDLIKVLVEHGFDLSVKCENHRSVIENYVMTDDPVPEIIDLFIENGCSVLYED  168 (661)
T ss_pred             HHhccCCCCCCCc--chHHHHHhhcCCHHHHHHHHHcCCCCCccCCCCccHHHHHHHccCCCHHHHHHHHHcCCCccccc
Confidence            8876544444442  37788899999999999999999999999999999999654  5789999999999999987432


Q ss_pred             --cCcc-----------CCHHHHHHH-----------cCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCch--HHHH
Q psy903          287 --NEFK-----------ESALTLACY-----------KGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHV--EVAK  340 (739)
Q Consensus       287 --~~~~-----------~~~l~~A~~-----------~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~  340 (739)
                        +..|           .||||+|+.           .++.+++++|++.|++++..+..|.||||+|+..|+.  ++++
T Consensus       169 ~~~~~g~~~~~~~~~~~~t~L~~a~~~~~~~~~~~~~~~~~eiv~~Li~~Gadvn~~d~~G~TpLh~A~~~g~~~~eivk  248 (661)
T PHA02917        169 EDDEYGYAYDDYQPRNCGTVLHLYIISHLYSESDTRAYVRPEVVKCLINHGIKPSSIDKNYCTALQYYIKSSHIDIDIVK  248 (661)
T ss_pred             cccccccccccccccccccHHHHHHhhcccccccccccCcHHHHHHHHHCCCCcccCCCCCCcHHHHHHHcCCCcHHHHH
Confidence              1223           599999986           4689999999999999999999999999999999986  7999


Q ss_pred             HHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHh---------cCCHHHHHHHHHCCCCCccCCCCCCCHH
Q psy903          341 LLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACS---------DGDVKTVKKLLTEGRSVHETTDEGESLL  411 (739)
Q Consensus       341 ~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~---------~~~~~~~~~Ll~~~~~~~~~~~~~~t~l  411 (739)
                      +|++ |++......              .......++++.++.         ..+.++++.|++.|++      .+.+++
T Consensus       249 ~Li~-g~d~~~~~~--------------~~~~~~~~~~~~a~yl~~~~~~~~~v~~~iv~~Li~~Ga~------~~~~~~  307 (661)
T PHA02917        249 LLMK-GIDNTAYSY--------------IDDLTCCTRGIMADYLNSDYRYNKDVDLDLVKLFLENGKP------HGIMCS  307 (661)
T ss_pred             HHHh-CCccccccc--------------ccCcccccchHHHHHHHhhccccccchHHHHHHHHhCCCC------CceeEe
Confidence            9875 655321100              000011111222221         1144555555555542      234455


Q ss_pred             HHHHHcCcHHHHHHHHHc-CCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCcc
Q psy903          412 SLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAK  490 (739)
Q Consensus       412 ~~a~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  490 (739)
                      ++++..+..+++++++.. +.          .+++                                             
T Consensus       308 ~~~~~~~~~~~~~~~~~~~~~----------~~~~---------------------------------------------  332 (661)
T PHA02917        308 IVPLWRNDKETISLILKTMNS----------DVLQ---------------------------------------------  332 (661)
T ss_pred             eecccccchHHHHHHHHHhch----------HHHH---------------------------------------------
Confidence            555555555555555431 11          1111                                             


Q ss_pred             ccccCcCCCCCHHHHHHhcCC--HHHHHHHHHcCCCCCCC---CCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCc
Q psy903          491 INAHTEETQETALTLACCGGF--LDVADFLLKNGANIELG---ASTPLMEAAQEGHLELVRYLLD-SGAQVHAKTQTGDT  564 (739)
Q Consensus       491 ~~~~~~~~~~~~l~~a~~~~~--~~~v~~Ll~~~~~~~~~---~~t~L~~A~~~~~~~~v~~Ll~-~g~~~~~~d~~g~t  564 (739)
                                .++..++..|.  .+++++|++.|++++..   |.+    +....+.+++++|+. .|++++..+.+|.|
T Consensus       333 ----------~~l~~~~~~g~~~~~~v~~Ll~~GAdvn~~~~~g~~----~~~~~~~~~i~~LL~~~ga~~~~~~~~G~T  398 (661)
T PHA02917        333 ----------HILIEYMTFGDIDIPLVECMLEYGAVVNKEAIHGYF----RNINIDSYTMKYLLKKEGGDAVNHLDDGEI  398 (661)
T ss_pred             ----------HHHHHHHHcCCCcHHHHHHHHHcCCCCCCCCccccc----hhhcCCHHHHHHHHHhcCCCccccCCCCCC
Confidence                      22333444555  56899999999988653   333    223566778888887 58887777778999


Q ss_pred             HHHHHHHcCc--HHHHHHHHhCCCCCCCCcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHHHcCCHHHHHHH
Q psy903          565 ALTYACENGH--TDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL  642 (739)
Q Consensus       565 ~l~~A~~~~~--~~iv~~Ll~~~~~~~~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L  642 (739)
                      |||.|++.+.  .+...+...+|     ...  .+...+..+++++|+++|++++.+|..|+||||+|+..++.+++++|
T Consensus       399 pL~~a~~~~~~~~~~~~~~~~~~-----~~~--~~~~~~~~~~v~~Ll~~GAdIN~kd~~G~TpLh~Aa~~~~~~~v~~L  471 (661)
T PHA02917        399 PIGHLCKSNYGCYNFYTYTYKKG-----LCD--MSYACPILSTINICLPYLKDINMIDKRGETLLHKAVRYNKQSLVSLL  471 (661)
T ss_pred             hhHHHHHhcccchhhhhhhhhhc-----cch--hhhhhhhHHHHHHHHHCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHH
Confidence            9998887654  34332222221     111  12223378899999999999999999999999999999999999999


Q ss_pred             HHcCCCC-----CCchHHHHHHh-CCChhHHHHHhcCCCcc
Q psy903          643 LSYGANL-----DNSTMLIEAAK-GGHANVVQLLLDFPRSV  677 (739)
Q Consensus       643 ~~~~~~~-----~~~~~L~~A~~-~g~~~~v~~L~~~~~~~  677 (739)
                      +++|++.     .|.|||+.|+. .++.+++++|+.+++.+
T Consensus       472 l~~GAdin~~d~~G~T~L~~A~~~~~~~~iv~~LL~~ga~i  512 (661)
T PHA02917        472 LESGSDVNIRSNNGYTCIAIAINESRNIELLKMLLCHKPTL  512 (661)
T ss_pred             HHCcCCCCCCCCCCCCHHHHHHHhCCCHHHHHHHHHcCCCh
Confidence            9999864     47788888875 67788888888776554

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=4.4e-48  Score=388.19  Aligned_cols=362  Identities=18%  Similarity=0.201  Sum_probs=269.9

Q ss_pred             HHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHH--cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHH
Q psy903          160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS--SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA  237 (739)
Q Consensus       160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~--~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~  237 (739)
                      +..++..++.+.++.+++...      ..++.++||.++.  ..+.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus        13 l~~~~~~~n~~~~~~~l~~~~------~~g~~~~Lh~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~e   86 (446)
T PHA02946         13 LYAKYNSKNLDVFRNMLQAIE------PSGNYHILHAYCGIKGLDERFVEELLHRGYSPNETDDDGNYPLHIASKINNNR   86 (446)
T ss_pred             HHHHHccCcHHHHHHHHhccC------CCCCChHHHHHHHhcCCCHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHH
Confidence            466777888888888887421      1234688988764  44678999999999999999999999999999999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHHhcC--ChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy903          238 VVRVLLECGANVEDHNENGHTPLMEAASAG--HVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD  315 (739)
Q Consensus       238 ~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~--~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~  315 (739)
                      ++++|+++|++++.+|..|.||||+|+..+  ..+++++|+++|++++...+..|.|||+ |+..++.+++++|++.|++
T Consensus        87 iv~lLL~~GAdin~~d~~g~TpLh~A~~~~~~~~e~v~lLl~~Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad  165 (446)
T PHA02946         87 IVAMLLTHGADPNACDKQHKTPLYYLSGTDDEVIERINLLVQYGAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFE  165 (446)
T ss_pred             HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCchHHHHHHHHHcCCCcccccCCCCCcHHH-HHHCCChHHHHHHHhcccc
Confidence            999999999999999999999999988765  4788888888888887655666778886 5556777888888887777


Q ss_pred             CCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHH
Q psy903          316 QEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLT  395 (739)
Q Consensus       316 ~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~  395 (739)
                      ++..+..|.+|||.|+..++                                                            
T Consensus       166 ~~~~d~~G~t~Lh~A~~~~~------------------------------------------------------------  185 (446)
T PHA02946        166 ARIVDKFGKNHIHRHLMSDN------------------------------------------------------------  185 (446)
T ss_pred             ccccCCCCCCHHHHHHHhcC------------------------------------------------------------
Confidence            77777777676666544322                                                            


Q ss_pred             CCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcc
Q psy903          396 EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKS  475 (739)
Q Consensus       396 ~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~  475 (739)
                                            ++.+++++|++.|++++..+                                      
T Consensus       186 ----------------------~~~~~v~~Ll~~Gadin~~d--------------------------------------  205 (446)
T PHA02946        186 ----------------------PKASTISWMMKLGISPSKPD--------------------------------------  205 (446)
T ss_pred             ----------------------CCHHHHHHHHHcCCCCcccC--------------------------------------
Confidence                                  11233444444443333221                                      


Q ss_pred             cccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCCCCCCCCcHHHHHHHcC--cHHHHHHHHHCCC
Q psy903          476 VNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEG--HLELVRYLLDSGA  553 (739)
Q Consensus       476 ~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~t~L~~A~~~~--~~~~v~~Ll~~g~  553 (739)
                                                                         ..|.||||+|+..+  +.+++++|++ |+
T Consensus       206 ---------------------------------------------------~~G~TpLH~Aa~~~~~~~~iv~lLl~-ga  233 (446)
T PHA02946        206 ---------------------------------------------------HDGNTPLHIVCSKTVKNVDIINLLLP-ST  233 (446)
T ss_pred             ---------------------------------------------------CCCCCHHHHHHHcCCCcHHHHHHHHc-CC
Confidence                                                               22445666666553  5677777774 77


Q ss_pred             CCCCCCCCCCcHHHHHHHcCc-HHHHHHHHhCCCCCCCCcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHHH
Q psy903          554 QVHAKTQTGDTALTYACENGH-TDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACE  632 (739)
Q Consensus       554 ~~~~~d~~g~t~l~~A~~~~~-~~iv~~Ll~~~~~~~~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~  632 (739)
                      +++.+|..|.||||+|++.++ .+++++|+++|....+++ ++.|+..+..++++++.++|.      ..|.||||+|+.
T Consensus       234 din~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~~~~-~~~a~~~~~~~~~e~l~~~g~------~~~~TpLh~Aa~  306 (446)
T PHA02946        234 DVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVITDQT-VNICIFYDRDDVLEIINDKGK------QYDSTDFKMAVE  306 (446)
T ss_pred             CCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCCCcH-HHHHHHcCchHHHHHHHHcCc------ccCCCHHHHHHH
Confidence            788888888888888887776 477788888877766655 777778888888888876653      346788888888


Q ss_pred             cCCHHHHHHHHHcCCCCCCchHHHHHHhCCChhHHHHHhcCCCcccCCCCCCCCCCCchhhhccCCCcccccCCCCCchH
Q psy903          633 NGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTA  712 (739)
Q Consensus       633 ~~~~~~v~~L~~~~~~~~~~~~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~  712 (739)
                      +|+.++|++|+++|+  .+.||||+|+..|+.+++++|+.+++.+                         |.. ..|.||
T Consensus       307 ~g~~eivk~Ll~~~~--~~~t~L~~A~~~~~~~~v~~Ll~~ga~~-------------------------n~~-~~G~t~  358 (446)
T PHA02946        307 VGSIRCVKYLLDNDI--ICEDAMYYAVLSEYETMVDYLLFNHFSV-------------------------DSV-VNGHTC  358 (446)
T ss_pred             cCCHHHHHHHHHCCC--ccccHHHHHHHhCHHHHHHHHHHCCCCC-------------------------CCc-cccccH
Confidence            888888888888875  5678888888888888888888866554                         554 468888


Q ss_pred             HHHHHHcCcHHHHHHHHHcCCCC
Q psy903          713 LTYACENGHTDVADLLLSYGANL  735 (739)
Q Consensus       713 l~~A~~~~~~~i~~~L~~~ga~~  735 (739)
                      |++|++.++.++++.|+.+.++.
T Consensus       359 l~~a~~~~~~~~~~~ll~~~~~~  381 (446)
T PHA02946        359 MSECVRLNNPVILSKLMLHNPTS  381 (446)
T ss_pred             HHHHHHcCCHHHHHHHHhcCccH
Confidence            88888888888888888876653

>PHA02946 ankyin-like protein; Provisional

Probab=100.00  E-value=1e-47  Score=385.60  Aligned_cols=322  Identities=19%  Similarity=0.263  Sum_probs=216.6

Q ss_pred             CHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC--cHHHHHHHHHC
Q psy903          135 DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG--FIEIVRLLINH  212 (739)
Q Consensus       135 ~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~--~~~~~~~Ll~~  212 (739)
                      +.++++.|+++|++++.+|..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..+  ..+++++|+++
T Consensus        51 ~~~iv~~Ll~~Gadvn~~d~~G~TpLh~Aa~~g~~eiv~lLL~~GAdin~~d~~-g~TpLh~A~~~~~~~~e~v~lLl~~  129 (446)
T PHA02946         51 DERFVEELLHRGYSPNETDDDGNYPLHIASKINNNRIVAMLLTHGADPNACDKQ-HKTPLYYLSGTDDEVIERINLLVQY  129 (446)
T ss_pred             CHHHHHHHHHCcCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCC-CCCHHHHHHHcCCchHHHHHHHHHc
Confidence            455666666666666666666666666666666666666666666666554433 346666666544  35666666666


Q ss_pred             CCCCCC-CCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC--ChHHHHHHHHcCCCCcccCcCc
Q psy903          213 GADVNG-QSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG--HVGVAKILLEYGAGINTHSNEF  289 (739)
Q Consensus       213 g~~~~~-~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~--~~~ii~~Ll~~~~~~~~~~~~~  289 (739)
                      |++++. .+..|.|||| |+..++.+++++|++.|++++..|..|.||||+|+..+  +.+++++|+++|++++.. +..
T Consensus       130 Gadin~~~d~~g~tpL~-aa~~~~~~vv~~Ll~~gad~~~~d~~G~t~Lh~A~~~~~~~~~~v~~Ll~~Gadin~~-d~~  207 (446)
T PHA02946        130 GAKINNSVDEEGCGPLL-ACTDPSERVFKKIMSIGFEARIVDKFGKNHIHRHLMSDNPKASTISWMMKLGISPSKP-DHD  207 (446)
T ss_pred             CCCcccccCCCCCcHHH-HHHCCChHHHHHHHhccccccccCCCCCCHHHHHHHhcCCCHHHHHHHHHcCCCCccc-CCC
Confidence            666663 4666666665 44456666666666666666666666666666665543  346666666666666553 334


Q ss_pred             cCCHHHHHHHcC--CHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCc-hHHHHHHHHcCCCchhhhcccCCCCCCCCCC
Q psy903          290 KESALTLACYKG--HLDMVRFLLSAGADQEHKTDEMHTALMEASMDGH-VEVAKLLLDSGAQSVSAYARHDFFPNDKCER  366 (739)
Q Consensus       290 ~~~~l~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~-~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~  366 (739)
                      |.||||+|+..+  +.+++++|++ |++++.++..|.||||+|+..++ .+++++|++++....                
T Consensus       208 G~TpLH~Aa~~~~~~~~iv~lLl~-gadin~~d~~G~TpLh~A~~~~~~~~~~~~Ll~~g~~~~----------------  270 (446)
T PHA02946        208 GNTPLHIVCSKTVKNVDIINLLLP-STDVNKQNKFGDSPLTLLIKTLSPAHLINKLLSTSNVIT----------------  270 (446)
T ss_pred             CCCHHHHHHHcCCCcHHHHHHHHc-CCCCCCCCCCCCCHHHHHHHhCChHHHHHHHHhCCCCCC----------------
Confidence            666666666654  5667776664 67777777777777777777666 356666666543210                


Q ss_pred             CCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHH
Q psy903          367 PSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM  446 (739)
Q Consensus       367 ~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~  446 (739)
                                                              +. .++.++..+..++++++.+++..              
T Consensus       271 ----------------------------------------~~-~~~~a~~~~~~~~~e~l~~~g~~--------------  295 (446)
T PHA02946        271 ----------------------------------------DQ-TVNICIFYDRDDVLEIINDKGKQ--------------  295 (446)
T ss_pred             ----------------------------------------Cc-HHHHHHHcCchHHHHHHHHcCcc--------------
Confidence                                                    11 25566666666666666654421              


Q ss_pred             HHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCCCC
Q psy903          447 EAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIE  526 (739)
Q Consensus       447 ~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~  526 (739)
                                                                         .+.||||+|+..|+.+++++|+++|.   
T Consensus       296 ---------------------------------------------------~~~TpLh~Aa~~g~~eivk~Ll~~~~---  321 (446)
T PHA02946        296 ---------------------------------------------------YDSTDFKMAVEVGSIRCVKYLLDNDI---  321 (446)
T ss_pred             ---------------------------------------------------cCCCHHHHHHHcCCHHHHHHHHHCCC---
Confidence                                                               12366777777777777777777764   


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy903          527 LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN  587 (739)
Q Consensus       527 ~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~  587 (739)
                       .+.||||+|+..++.+++++|+.+|++++.+ ..|.||+|+|++.++.++++.|+.+.++
T Consensus       322 -~~~t~L~~A~~~~~~~~v~~Ll~~ga~~n~~-~~G~t~l~~a~~~~~~~~~~~ll~~~~~  380 (446)
T PHA02946        322 -ICEDAMYYAVLSEYETMVDYLLFNHFSVDSV-VNGHTCMSECVRLNNPVILSKLMLHNPT  380 (446)
T ss_pred             -ccccHHHHHHHhCHHHHHHHHHHCCCCCCCc-cccccHHHHHHHcCCHHHHHHHHhcCcc
Confidence             3679999999999999999999999999986 5799999999999999999999996554

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=6.9e-46  Score=372.60  Aligned_cols=448  Identities=15%  Similarity=0.166  Sum_probs=240.5

Q ss_pred             HHHHHHHhcCCCCC-cCCCCCCcHHHHHHHcC---cHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC--cHHHHHHHH
Q psy903          137 KTVKKLLTEGRSVH-ETTDEGESLLSLACSAG---YYELAQVLLAMHANVEDRGIKGECTPLMEAASSG--FIEIVRLLI  210 (739)
Q Consensus       137 ~~~~~ll~~~~~~~-~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~--~~~~~~~Ll  210 (739)
                      ..+++.++..++++ .+|..|.||||+|+..|   +.++|++|+++|++++.++.. |+||||+|+..+  +.|++++|+
T Consensus        21 ~~~~~~~~~~~~in~~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~-G~TPLh~Aa~~~~~~~eIv~~Ll   99 (672)
T PHA02730         21 KKIKLEIETCHNLSKHIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNE-GLTPLGVYSKRKYVKSQIVHLLI   99 (672)
T ss_pred             HHHHHHHHHhcchhhhcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCC-CCChHHHHHHcCCCcHHHHHHHH
Confidence            44555555544555 45555556666555554   355555555555555544432 345555555544  455555555


Q ss_pred             HCCCC--CCCCCCCCCcHHHHHHh--cCcHHHHHHHHH-CCCCCCCCCC-----CCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903          211 NHGAD--VNGQSSSGNTPLMYACA--GGHEAVVRVLLE-CGANVEDHNE-----NGHTPLMEAASAGHVGVAKILLEYGA  280 (739)
Q Consensus       211 ~~g~~--~~~~~~~~~t~L~~A~~--~~~~~~v~~Ll~-~~~~~~~~~~-----~~~t~L~~A~~~~~~~ii~~Ll~~~~  280 (739)
                      +.|++  ++..+..+.+||+.++.  +++.+++++|++ .+++++....     .|.+|++.+...++.+++++|+++|+
T Consensus       100 ~~~~~~~~~~~~~~~d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~  179 (672)
T PHA02730        100 SSYSNASNELTSNINDFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSEC  179 (672)
T ss_pred             hcCCCCCcccccccCCchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCC
Confidence            55332  24444444555555544  455555555553 3344443321     34455555555555555555555544


Q ss_pred             CCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcC-CcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCC
Q psy903          281 GINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEM-HTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFF  359 (739)
Q Consensus       281 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~  359 (739)
                      +.....-                        ++   ...+... .+.|++.+...                         
T Consensus       180 ~v~g~~~------------------------~~---~~~~~~~c~~~l~~~il~~-------------------------  207 (672)
T PHA02730        180 YSTGYVF------------------------RS---CMYDSDRCKNSLHYYILSH-------------------------  207 (672)
T ss_pred             ccccccc------------------------cc---ccccCCccchhHHHHHHhh-------------------------
Confidence            4321000                        00   0011122 23444333211                         


Q ss_pred             CCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHH--HHHcCcHHHHHHHHHcCCCccccc
Q psy903          360 PNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSL--ACSAGYYELAQVLLAMHANVEDRG  437 (739)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~--a~~~~~~~~v~~Ll~~~~~~~~~~  437 (739)
                                          .....++.++++.|+++|++++.++..|.||||+  +...++.|++++|++...+....+
T Consensus       208 --------------------~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~~~~~eiv~~Li~~~~~~~~~~  267 (672)
T PHA02730        208 --------------------RESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCSTIDIEIVKLLIKDVDTCSVYD  267 (672)
T ss_pred             --------------------hhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCcccHHHHHHHHhccccccccc
Confidence                                1134567899999999999999999999999995  445567999999998443332221


Q ss_pred             CCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccc-cccCcCCCCCHHHHHHhcC-CHHHH
Q psy903          438 IKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKI-NAHTEETQETALTLACCGG-FLDVA  515 (739)
Q Consensus       438 ~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~-~~~~~~~~~~~l~~a~~~~-~~~~v  515 (739)
                      ...  ++-           ...++..+.+..+.-............+++.+... .....   -+|+   -..| +-.++
T Consensus       268 ~~~--~~~-----------~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~~~---~~~~---~~~~~n~~~~  328 (672)
T PHA02730        268 DIS--QPY-----------IRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVMRS---ITSY---DSREYNHYII  328 (672)
T ss_pred             ccc--chh-----------hhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhhhc---cccc---cccccchhHH
Confidence            111  110           00111222222221111112211122222211110 00000   0000   0011 11222


Q ss_pred             HHHHHcCCCCCCC-CCcHHHHHHHcC---cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCc----HHHHHHHHhCCCC
Q psy903          516 DFLLKNGANIELG-ASTPLMEAAQEG---HLELVRYLLDSGAQVHAKTQTGDTALTYACENGH----TDVADLLLSYGAN  587 (739)
Q Consensus       516 ~~Ll~~~~~~~~~-~~t~L~~A~~~~---~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~----~~iv~~Ll~~~~~  587 (739)
                      ..++.+....+.. -+..|+.-..++   +.+++++|+++|++++.. ..|.||||+|+..++    .+++++|+++|++
T Consensus       329 ~~i~~~~~~~~~~~~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k-~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~  407 (672)
T PHA02730        329 DNILKRFRQQDESIVQAMLINYLHYGDMVSIPILRCMLDNGATMDKT-TDNNYPLHDYFVNNNNIVDVNVVRFIVENNGH  407 (672)
T ss_pred             HHHHHhhhccchhHHHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcC-CCCCcHHHHHHHHcCCcchHHHHHHHHHcCCC
Confidence            2222221111110 123566555544   589999999999999985 789999998888774    7888888888763


Q ss_pred             --C-----CCCcHHHH---HHHcC---------CHHHHHHHhhCCCCCCcCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy903          588 --L-----DNSTMLIE---AAKGG---------HANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN  648 (739)
Q Consensus       588 --~-----~~~~~l~~---A~~~~---------~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~  648 (739)
                        .     +|.||||.   |...+         ..+++++|+++|++++.+|..|+||||+|+..++.+++++|+++|++
T Consensus       408 ~dIN~kd~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAd  487 (672)
T PHA02730        408 MAINHVSNNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGAS  487 (672)
T ss_pred             ccccccccCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCC
Confidence              2     37788873   22222         23568888888888888888888888888888888888888888875


Q ss_pred             C------CCchHHHHHHh--CCChhHHHHHhcCCCcc
Q psy903          649 L------DNSTMLIEAAK--GGHANVVQLLLDFPRSV  677 (739)
Q Consensus       649 ~------~~~~~L~~A~~--~g~~~~v~~L~~~~~~~  677 (739)
                      .      +|.||||.|+.  .|+.+++++|+++++.+
T Consensus       488 IN~~d~~~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i  524 (672)
T PHA02730        488 VNTTSRSIINTAIQKSSYRRENKTKLVDLLLSYHPTL  524 (672)
T ss_pred             CCCCCCcCCcCHHHHHHHhhcCcHHHHHHHHHcCCCH
Confidence            3      25666666665  25666666666655443

>PHA02730 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.2e-45  Score=367.78  Aligned_cols=431  Identities=17%  Similarity=0.189  Sum_probs=287.9

Q ss_pred             CCCCCCchHHHHHHHcC---CHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcC--cHHHHHHHHhCCCCc--cccCCCCC
Q psy903          118 NPRPQNERSLVQACSDG---DVKTVKKLLTEGRSVHETTDEGESLLSLACSAG--YYELAQVLLAMHANV--EDRGIKGE  190 (739)
Q Consensus       118 ~~~~~~~~~l~~A~~~~---~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~~~~~--~~~~~~~~  190 (739)
                      .....|.||||+|+..|   +.+++++|+++|++++.+|..|.||||+|+..+  +.++|++|++.|++.  +..+ ..+
T Consensus        36 ~kd~~G~TaLh~A~~~~~~~~~eivklLLs~GAdin~kD~~G~TPLh~Aa~~~~~~~eIv~~Ll~~~~~~~~~~~~-~~~  114 (672)
T PHA02730         36 HIDRRGNNALHCYVSNKCDTDIKIVRLLLSRGVERLCRNNEGLTPLGVYSKRKYVKSQIVHLLISSYSNASNELTS-NIN  114 (672)
T ss_pred             hcCCCCCcHHHHHHHcCCcCcHHHHHHHHhCCCCCcccCCCCCChHHHHHHcCCCcHHHHHHHHhcCCCCCccccc-ccC
Confidence            34456899999999997   599999999999999999999999999999976  799999999997655  4333 335


Q ss_pred             CcHHHHHHH--cCcHHHHHHHHH-CCCCCCCCCC-----CCCcHHHHHHhcCcHHHHHHHHHCCCCCCC-------CCCC
Q psy903          191 CTPLMEAAS--SGFIEIVRLLIN-HGADVNGQSS-----SGNTPLMYACAGGHEAVVRVLLECGANVED-------HNEN  255 (739)
Q Consensus       191 ~t~L~~A~~--~~~~~~~~~Ll~-~g~~~~~~~~-----~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-------~~~~  255 (739)
                      .+||+.++.  +++.+++++|++ .+++++....     .|.+|++++...++.++|++|+++|++++.       .+..
T Consensus       115 d~~l~~y~~s~n~~~~~vk~Li~~~~~~~~~~~~~~~~~~~~~~~yl~~~~~~~eIvklLi~~g~~v~g~~~~~~~~~~~  194 (672)
T PHA02730        115 DFDLYSYMSSDNIDLRLLKYLIVDKRIRPSKNTNYYIHCLGLVDIYVTTPNPRPEVLLWLLKSECYSTGYVFRSCMYDSD  194 (672)
T ss_pred             CchHHHHHHhcCCcHHHHHHHHHhcCCChhhhhhhhccccchhhhhHhcCCCchHHHHHHHHcCCcccccccccccccCC
Confidence            699999998  888999999996 6788876632     789999999999999999999999999852       2222


Q ss_pred             CC-cHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHH--HHh
Q psy903          256 GH-TPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALME--ASM  332 (739)
Q Consensus       256 ~~-t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~--a~~  332 (739)
                      .. |.|++++..           +                 .+...++.+++++|+++|++++.++..|.||||+  +..
T Consensus       195 ~c~~~l~~~il~-----------~-----------------~~~~~n~~eiv~lLIs~GadIN~kd~~G~TpLh~~~~~~  246 (672)
T PHA02730        195 RCKNSLHYYILS-----------H-----------------RESESLSKDVIKCLIDNNVSIHGRDEGGSLPIQYYWSCS  246 (672)
T ss_pred             ccchhHHHHHHh-----------h-----------------hhhhccCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcC
Confidence            22 233323211           1                 0123446677777777777777777777777764  444


Q ss_pred             CCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHH-hcCCHHHHHHHHHCCCCCccCCCCCCCHH
Q psy903          333 DGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQAC-SDGDVKTVKKLLTEGRSVHETTDEGESLL  411 (739)
Q Consensus       333 ~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~-~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l  411 (739)
                      .++.|++++|++...+.....+..  .+     ........+...-..-- ..-+.++|+.|++.+......- ...+|+
T Consensus       247 ~~~~eiv~~Li~~~~~~~~~~~~~--~~-----~~~~~~~~~~~~~~~~~~~~~d~~i~~~~~~~~~~~~~~~-~~~~~~  318 (672)
T PHA02730        247 TIDIEIVKLLIKDVDTCSVYDDIS--QP-----YIRGVLADYLNKRFRVTPYNVDMEIVNLLIEGRHTLIDVM-RSITSY  318 (672)
T ss_pred             cccHHHHHHHHhcccccccccccc--ch-----hhhhhHHHhhhhhhhcccCCcchHHHHHHhhccCcchhhh-hccccc
Confidence            555777777776322211000000  00     00000000000000000 0112344555554332210000 000000


Q ss_pred             HHHHHcC-cHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCcc
Q psy903          412 SLACSAG-YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAK  490 (739)
Q Consensus       412 ~~a~~~~-~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~  490 (739)
                         -..| +.+++..++......+..                   .                                  
T Consensus       319 ---~~~~~n~~~~~~i~~~~~~~~~~-------------------~----------------------------------  342 (672)
T PHA02730        319 ---DSREYNHYIIDNILKRFRQQDES-------------------I----------------------------------  342 (672)
T ss_pred             ---cccccchhHHHHHHHhhhccchh-------------------H----------------------------------
Confidence               0001 112222222111110000                   0                                  


Q ss_pred             ccccCcCCCCCHHHHHHhcC---CHHHHHHHHHcCCCCCC--CCCcHHHHHHHcCc----HHHHHHHHHCCC--CCCCCC
Q psy903          491 INAHTEETQETALTLACCGG---FLDVADFLLKNGANIEL--GASTPLMEAAQEGH----LELVRYLLDSGA--QVHAKT  559 (739)
Q Consensus       491 ~~~~~~~~~~~~l~~a~~~~---~~~~v~~Ll~~~~~~~~--~~~t~L~~A~~~~~----~~~v~~Ll~~g~--~~~~~d  559 (739)
                              -+..|+.-...+   +.+++++|+++|++++.  .|.||||+|+..++    .+++++|+++|+  +++.+|
T Consensus       343 --------~q~~l~~Y~~~~~~v~ieIvelLIs~GAdIN~k~~G~TpLH~Aa~~nnn~i~~eIvelLIs~Ga~~dIN~kd  414 (672)
T PHA02730        343 --------VQAMLINYLHYGDMVSIPILRCMLDNGATMDKTTDNNYPLHDYFVNNNNIVDVNVVRFIVENNGHMAINHVS  414 (672)
T ss_pred             --------HHHHHHHHHhcCCcCcHHHHHHHHHCCCCCCcCCCCCcHHHHHHHHcCCcchHHHHHHHHHcCCCccccccc
Confidence                    012344444433   58999999999998765  47899999988875    899999999987  689999


Q ss_pred             CCCCcHHHH---HHHcC---------cHHHHHHHHhCCCCCC-----CCcHHHHHHHcCCHHHHHHHhhCCCCCCcCCC-
Q psy903          560 QTGDTALTY---ACENG---------HTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQ-  621 (739)
Q Consensus       560 ~~g~t~l~~---A~~~~---------~~~iv~~Ll~~~~~~~-----~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~-  621 (739)
                      ..|.||||.   |...+         ..+++++|+++|++++     |.||||.|+..++.+++++|+++|++++..+. 
T Consensus       415 ~~G~T~Lh~~i~a~~~n~~~~~~e~~~~~ivk~LIs~GADINakD~~G~TPLh~Aa~~~~~eive~LI~~GAdIN~~d~~  494 (672)
T PHA02730        415 NNGRLCMYGLILSRFNNCGYHCYETILIDVFDILSKYMDDIDMIDNENKTLLYYAVDVNNIQFARRLLEYGASVNTTSRS  494 (672)
T ss_pred             cCCCchHhHHHHHHhccccccccchhHHHHHHHHHhcccchhccCCCCCCHHHHHHHhCCHHHHHHHHHCCCCCCCCCCc
Confidence            999999984   33222         2367999999998765     89999999999999999999999999999997 


Q ss_pred             CCCcHHHHHHHc--CCHHHHHHHHHcCCCC
Q psy903          622 TGDTALTYACEN--GHTDVADLLLSYGANL  649 (739)
Q Consensus       622 ~g~t~l~~A~~~--~~~~~v~~L~~~~~~~  649 (739)
                      .|.|||++|+..  ++.+++++|+++|++.
T Consensus       495 ~g~TaL~~Aa~~~~~~~eIv~~LLs~ga~i  524 (672)
T PHA02730        495 IINTAIQKSSYRRENKTKLVDLLLSYHPTL  524 (672)
T ss_pred             CCcCHHHHHHHhhcCcHHHHHHHHHcCCCH
Confidence            699999999874  7899999999999875

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=1.1e-45  Score=379.33  Aligned_cols=393  Identities=16%  Similarity=0.112  Sum_probs=286.6

Q ss_pred             hcCCHHHHHHHHHcC-CCCccc-CCCCCcHHHHHHh--cCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccccc
Q psy903            7 SDGDVKTVKKLLTEG-RSVHET-TDEGESLLSLACS--AGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLAT   82 (739)
Q Consensus         7 ~~g~~~~v~~ll~~g-~~~~~~-~~~g~t~L~~A~~--~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~   82 (739)
                      ..+++++|++|++.| +++|.. |..|+||||+|+.  +++.+++++|+++|++++..|..|. ||||+|+..|      
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~-TPLH~Aa~~g------  223 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLI-TPLHTYLITG------  223 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCC-CHHHHHHHcC------
Confidence            468999999999999 999998 8899999999875  4678999999999999999888776 8888888765      


Q ss_pred             CCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHH
Q psy903           83 GDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSL  162 (739)
Q Consensus        83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~  162 (739)
                                                                        ..+.+++++|++.|++++.++..|.||||+
T Consensus       224 --------------------------------------------------~~~~eIVklLLe~GADVN~kD~~G~TPLh~  253 (764)
T PHA02716        224 --------------------------------------------------NVCASVIKKIIELGGDMDMKCVNGMSPIMT  253 (764)
T ss_pred             --------------------------------------------------CCCHHHHHHHHHcCCCCCCCCCCCCCHHHH
Confidence                                                              113589999999999999999999999998


Q ss_pred             HH---HcCcHHHHHHHHhCCCCccccCCCCCCcHHH---HHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHh--cC
Q psy903          163 AC---SAGYYELAQVLLAMHANVEDRGIKGECTPLM---EAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACA--GG  234 (739)
Q Consensus       163 A~---~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~---~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~--~~  234 (739)
                      |+   ..++.++++.|++.+.......   ...+++   .|+..|+.+++++|+++|++++.+|..|+||||+|+.  .+
T Consensus       254 Ai~~a~n~~~EIvkiLie~~d~n~~~~---~~~~L~~~i~AA~~g~leiVklLLe~GAdIN~kD~~G~TPLH~Aaa~~~~  330 (764)
T PHA02716        254 YIINIDNINPEITNIYIESLDGNKVKN---IPMILHSYITLARNIDISVVYSFLQPGVKLHYKDSAGRTCLHQYILRHNI  330 (764)
T ss_pred             HHHhhhccCHHHHHHHHHhcccccccc---chhhhHHHHHHHHcCCHHHHHHHHhCCCceeccCCCCCCHHHHHHHHhCC
Confidence            86   4678999999998753322111   113333   4788999999999999999999999999999999875  46


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhc--------------CChHHHHHHHHcCCCCcccCcCccCCHHHH----
Q psy903          235 HEAVVRVLLECGANVEDHNENGHTPLMEAASA--------------GHVGVAKILLEYGAGINTHSNEFKESALTL----  296 (739)
Q Consensus       235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~--------------~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~----  296 (739)
                      +.+++++|+++|++++.+|..|.||||+|+..              ++.+++++|+++|++++.. +..|.||||.    
T Consensus       331 ~~eIVklLLe~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~k-n~~G~TPLh~y~~~  409 (764)
T PHA02716        331 STDIIKLLHEYGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAV-NCLGYTPLTSYICT  409 (764)
T ss_pred             CchHHHHHHHcCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCc-CCCCCChHHHHHHH
Confidence            78999999999999999999999999998752              4667777777777776654 3447777762    


Q ss_pred             HHHcCCHHHHHHHHHcCCCCCCCCC--------cCCc--HHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCC
Q psy903          297 ACYKGHLDMVRFLLSAGADQEHKTD--------EMHT--ALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCER  366 (739)
Q Consensus       297 A~~~~~~~~v~~Ll~~~~~~~~~~~--------~~~~--~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~  366 (739)
                      |...+..+++++|++.|+.....+.        .+.+  .++.++..+..+...++.+...                   
T Consensus       410 a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~~~d~~~~~lhh~~a~~~~~~~~~~~~~~~-------------------  470 (764)
T PHA02716        410 AQNYMYYDIIDCLISDKVLNMVKHRILQDLLIRVDDTPCIIHHIIAKYNIPTDLYTDEYEP-------------------  470 (764)
T ss_pred             HHhcChHHHHHHHHhCcchhhhhhhhhhhhhhccCcchhhHHHHHHhcCcchhhhhhhhhh-------------------
Confidence            2234566777777766543222111        1111  1233333333322222211100                   


Q ss_pred             CCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcH-----HHHHHHHHcCCCcccccCCCC
Q psy903          367 PSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYY-----ELAQVLLAMHANVEDRGIKGE  441 (739)
Q Consensus       367 ~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~-----~~v~~Ll~~~~~~~~~~~~~~  441 (739)
                                    .......+++..++..+.+++..+..|.||||+|+..++.     +++++|++.|++++..+..| 
T Consensus       471 --------------~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v~~e~~k~LL~~GADIN~~d~~G-  535 (764)
T PHA02716        471 --------------YDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANIVMDSFVYLLSIQYNINIPTKNG-  535 (764)
T ss_pred             --------------ccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccchhHHHHHHHHhCCCCCcccCCCC-
Confidence                          0001222444455556777888899999999999998876     55699999999998876554 


Q ss_pred             CcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCH-----HHHH
Q psy903          442 CTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFL-----DVAD  516 (739)
Q Consensus       442 ~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~-----~~v~  516 (739)
                      .|                                                          |||+|+..|+.     ++++
T Consensus       536 ~T----------------------------------------------------------PLh~A~~~g~~~~~~~eIvk  557 (764)
T PHA02716        536 VT----------------------------------------------------------PLMLTMRNNRLSGHQWYIVK  557 (764)
T ss_pred             CC----------------------------------------------------------HHHHHHHcCCccccHHHHHH
Confidence            44                                                          45555555543     8888


Q ss_pred             HHHHcCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCC
Q psy903          517 FLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQV  555 (739)
Q Consensus       517 ~Ll~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~  555 (739)
                      .|+++|++++..   .|+.|...++.+++.+|..++..+
T Consensus       558 ~LL~~ga~~~~~---~l~~~~~~~~~~~~~ll~~~~~~~  593 (764)
T PHA02716        558 NILDKRPNVDIV---IIFLDKCYANGKFPSLLLSEDDII  593 (764)
T ss_pred             HHHhcCCCcchH---HHHHHhhhhhhHHHHHHHHcchhH
Confidence            888888887653   578888888888888888776543

>PHA02716 CPXV016; CPX019; EVM010; Provisional

Probab=100.00  E-value=6.4e-44  Score=366.41  Aligned_cols=380  Identities=18%  Similarity=0.183  Sum_probs=269.9

Q ss_pred             HcCcHHHHHHHHhCC-CCccccCCCCCCcHHHHHHHc--CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCc--HHHH
Q psy903          165 SAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAASS--GFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH--EAVV  239 (739)
Q Consensus       165 ~~~~~~~v~~Ll~~~-~~~~~~~~~~~~t~L~~A~~~--~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~--~~~v  239 (739)
                      ..++.+++++|++.| ++++...+..|.||||.|+..  ++.+++++|+++|++++.+|..|.||||+|+..|+  .+++
T Consensus       151 ~~v~leiVk~LLe~G~ADIN~~~d~~G~TpLH~A~~n~~~~~eIVklLLe~GADVN~kD~~G~TPLH~Aa~~g~~~~eIV  230 (764)
T PHA02716        151 RGIDLDLIKYMVDVGIVNLNYVCKKTGYGILHAYLGNMYVDIDILEWLCNNGVNVNLQNNHLITPLHTYLITGNVCASVI  230 (764)
T ss_pred             cCCCHHHHHHHHHCCCCCcccccCCCCCcHHHHHHHhccCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCCCHHHH
Confidence            468899999999999 998887556678999988654  57899999999999999999999999999999985  5899


Q ss_pred             HHHHHCCCCCCCCCCCCCcHHHHHH---hcCChHHHHHHHHcCCCCcccCcCccCCHHH---HHHHcCCHHHHHHHHHcC
Q psy903          240 RVLLECGANVEDHNENGHTPLMEAA---SAGHVGVAKILLEYGAGINTHSNEFKESALT---LACYKGHLDMVRFLLSAG  313 (739)
Q Consensus       240 ~~Ll~~~~~~~~~~~~~~t~L~~A~---~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~---~A~~~~~~~~v~~Ll~~~  313 (739)
                      ++|+++|++++.++..|.||||.|+   ..++.++++.|++.+......   ....+++   .|+..|+.+++++|++.|
T Consensus       231 klLLe~GADVN~kD~~G~TPLh~Ai~~a~n~~~EIvkiLie~~d~n~~~---~~~~~L~~~i~AA~~g~leiVklLLe~G  307 (764)
T PHA02716        231 KKIIELGGDMDMKCVNGMSPIMTYIINIDNINPEITNIYIESLDGNKVK---NIPMILHSYITLARNIDISVVYSFLQPG  307 (764)
T ss_pred             HHHHHcCCCCCCCCCCCCCHHHHHHHhhhccCHHHHHHHHHhccccccc---cchhhhHHHHHHHHcCCHHHHHHHHhCC
Confidence            9999999999999999999999875   467899999998864332111   1112333   478899999999999999


Q ss_pred             CCCCCCCCcCCcHHHHHHh--CCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHH
Q psy903          314 ADQEHKTDEMHTALMEASM--DGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVK  391 (739)
Q Consensus       314 ~~~~~~~~~~~~~l~~a~~--~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~  391 (739)
                      ++++.++..|.||||+|+.  .++.+++++|++                                               
T Consensus       308 AdIN~kD~~G~TPLH~Aaa~~~~~~eIVklLLe-----------------------------------------------  340 (764)
T PHA02716        308 VKLHYKDSAGRTCLHQYILRHNISTDIIKLLHE-----------------------------------------------  340 (764)
T ss_pred             CceeccCCCCCCHHHHHHHHhCCCchHHHHHHH-----------------------------------------------
Confidence            9999999999999998764  334555555554                                               


Q ss_pred             HHHHCCCCCccCCCCCCCHHHHHHH--------------cCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccch
Q psy903          392 KLLTEGRSVHETTDEGESLLSLACS--------------AGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNL  457 (739)
Q Consensus       392 ~Ll~~~~~~~~~~~~~~t~l~~a~~--------------~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~  457 (739)
                          .|++++.++..|.||||.|+.              .++.+++++|+++|++++..+..| .||||.++..      
T Consensus       341 ----~GADIN~kD~~G~TPLH~A~~~lav~~~ld~~~~~~~~~eVVklLL~~GADIn~kn~~G-~TPLh~y~~~------  409 (764)
T PHA02716        341 ----YGNDLNEPDNIGNTVLHTYLSMLSVVNILDPETDNDIRLDVIQCLISLGADITAVNCLG-YTPLTSYICT------  409 (764)
T ss_pred             ----cCCCCccCCCCCCCHHHHHHHhhhhhccccccccccChHHHHHHHHHCCCCCCCcCCCC-CChHHHHHHH------
Confidence                455577788889999998865              368899999999999998887665 7777632211      


Q ss_pred             hhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCCCC-----------
Q psy903          458 NESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIE-----------  526 (739)
Q Consensus       458 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~-----------  526 (739)
                                                                      |...+..+++++|++.+....           
T Consensus       410 ------------------------------------------------a~n~~~~dIvklLis~~~~~~~~~~~~q~ll~  441 (764)
T PHA02716        410 ------------------------------------------------AQNYMYYDIIDCLISDKVLNMVKHRILQDLLI  441 (764)
T ss_pred             ------------------------------------------------HHhcChHHHHHHHHhCcchhhhhhhhhhhhhh
Confidence                                                            111233445555544432210           


Q ss_pred             CCCCc--HHHHHHHcCcH------------------HHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy903          527 LGAST--PLMEAAQEGHL------------------ELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA  586 (739)
Q Consensus       527 ~~~~t--~L~~A~~~~~~------------------~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~  586 (739)
                      ..+.+  ++|.++..++.                  +++..++..+.+++..|..|+||||+|+..|+.+++        
T Consensus       442 ~~d~~~~~lhh~~a~~~~~~~~~~~~~~~~~~~~~~~v~~~~ii~~~nvN~~D~~G~TPLh~Aa~~g~~~~v--------  513 (764)
T PHA02716        442 RVDDTPCIIHHIIAKYNIPTDLYTDEYEPYDSTKIHDVYHCAIIERYNNAVCETSGMTPLHVSIISHTNANI--------  513 (764)
T ss_pred             ccCcchhhHHHHHHhcCcchhhhhhhhhhccccccchhhHHHHHhhccccccCCCCCCHHHHHHHcCCccch--------
Confidence            01111  13333332222                  233333344555666666666666666665544322        


Q ss_pred             CCCCCcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHHHcCCH-----HHHHHHHHcCCCCCCchHHHHHHhC
Q psy903          587 NLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHT-----DVADLLLSYGANLDNSTMLIEAAKG  661 (739)
Q Consensus       587 ~~~~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~~~~~-----~~v~~L~~~~~~~~~~~~L~~A~~~  661 (739)
                                     ..+++++|++.|++++.+|..|+||||+|+++|+.     ++|+.|+++|++.+-. .|+.|...
T Consensus       514 ---------------~~e~~k~LL~~GADIN~~d~~G~TPLh~A~~~g~~~~~~~eIvk~LL~~ga~~~~~-~l~~~~~~  577 (764)
T PHA02716        514 ---------------VMDSFVYLLSIQYNINIPTKNGVTPLMLTMRNNRLSGHQWYIVKNILDKRPNVDIV-IIFLDKCY  577 (764)
T ss_pred             ---------------hHHHHHHHHhCCCCCcccCCCCCCHHHHHHHcCCccccHHHHHHHHHhcCCCcchH-HHHHHhhh
Confidence                           23556777777778888888888888888887765     7888888888775544 47777777


Q ss_pred             CChhHHHHHhcCCCcc
Q psy903          662 GHANVVQLLLDFPRSV  677 (739)
Q Consensus       662 g~~~~v~~L~~~~~~~  677 (739)
                      ++.+++..|..++..+
T Consensus       578 ~~~~~~~ll~~~~~~~  593 (764)
T PHA02716        578 ANGKFPSLLLSEDDII  593 (764)
T ss_pred             hhhHHHHHHHHcchhH
Confidence            7777777777765433

>KOG0510|consensus

Probab=100.00  E-value=1.1e-43  Score=346.34  Aligned_cols=402  Identities=26%  Similarity=0.337  Sum_probs=282.3

Q ss_pred             hhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCC
Q psy903            5 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGD   84 (739)
Q Consensus         5 A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~   84 (739)
                      ++..++.+.-..++..-.++...+.+-.++.+.+...   |...++++..+.+...+..|. |++|.++..+.       
T Consensus         5 ~~~~~~~~~qea~~~~~~~~~~~~~d~~~~~~~~~~d---D~~tli~~kns~~~~~~~~gd-~~~~~~~~~~y-------   73 (929)
T KOG0510|consen    5 NCEFNDPQAQEALLLAKQDIRQPVADLDSQALADTLD---DRHTLILEKNSSTPGKRAFGD-TELHHASARNY-------   73 (929)
T ss_pred             ccCCCCcHHHHHhhhhhhhhhhhhHHHhHHHHHhhHH---HHHHHHHHhccccchhhhhch-hHHHHHHhhcc-------
Confidence            4455566666666665555666666655666665544   788888888877776666665 88888887661       


Q ss_pred             CCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHH
Q psy903           85 GKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLAC  164 (739)
Q Consensus        85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~  164 (739)
                                                                               .+++-......|..+.+|||+|+
T Consensus        74 ---------------------------------------------------------~~~~~~~~~a~D~~~n~~l~~a~   96 (929)
T KOG0510|consen   74 ---------------------------------------------------------ILSKLAISYAKDSADNTPLHAAV   96 (929)
T ss_pred             ---------------------------------------------------------hhhhhhhhhhhhcccCchhHHHh
Confidence                                                                     02222334456777888888888


Q ss_pred             HcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH
Q psy903          165 SAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE  244 (739)
Q Consensus       165 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~  244 (739)
                      .....+.+++|++.|+++...+... .+|+|+|+..++.++.+.|+++|+|+|..|..+.||||.|+..++.|..+.|++
T Consensus        97 ~~~~~~~i~~Lls~gad~~~~n~~~-~aplh~A~~~~~~s~L~~Ll~~~~dvnl~de~~~TpLh~A~~~~~~E~~k~Li~  175 (929)
T KOG0510|consen   97 EYNQGDKIQVLLSYGADTPLRNLNK-NAPLHLAADSGNYSCLKLLLDYGADVNLEDENGFTPLHLAARKNKVEAKKELIN  175 (929)
T ss_pred             hcchHHHHHHHHhcCCCCChhhhhc-cCchhhccccchHHHHHHHHHhcCCccccccCCCchhhHHHhcChHHHHHHHHh
Confidence            8888888888888888887776655 488888888888888888888888888888888888888888888888888888


Q ss_pred             CCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH-----cCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCC
Q psy903          245 CGANVEDHNENGHTPLMEAASAGHVGVAKILLE-----YGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHK  319 (739)
Q Consensus       245 ~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~-----~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~  319 (739)
                      .|+++...|.+|.+|+|.|+++|..+..+..+.     ++..++...+ .+.+|||.|+..|+.++++.+++.|......
T Consensus       176 ~~a~~~K~~~~~~~~iH~aa~s~s~e~mEi~l~~~g~~r~~~in~~~n-~~~~pLhlAve~g~~e~lk~~L~n~~~~a~~  254 (929)
T KOG0510|consen  176 KGADPCKSDIDGNFPIHEAARSGSKECMEIFLPEHGYERQTHINFDNN-EKATPLHLAVEGGDIEMLKMCLQNGKKIADV  254 (929)
T ss_pred             cCCCCCcccCcCCchHHHHHHhcchhhhhhhhccccchhhcccccccC-CCCcchhhhhhcCCHHHHHHHHhCccccchh
Confidence            888888888888888888888888888888876     3333333222 2445555555555555555555444332211


Q ss_pred             CCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCC
Q psy903          320 TDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRS  399 (739)
Q Consensus       320 ~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~  399 (739)
                      ..+                                                               .....+.|      
T Consensus       255 ~~~---------------------------------------------------------------~~~q~kel------  265 (929)
T KOG0510|consen  255 QLD---------------------------------------------------------------AMQQEKEL------  265 (929)
T ss_pred             hhH---------------------------------------------------------------HHHHHHHH------
Confidence            100                                                               00111122      


Q ss_pred             CccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccc
Q psy903          400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGL  479 (739)
Q Consensus       400 ~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  479 (739)
                      ++..|.+|.||||+|++.|+.+.++.|+..|++++..+..+                                       
T Consensus       266 v~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~---------------------------------------  306 (929)
T KOG0510|consen  266 VNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDE---------------------------------------  306 (929)
T ss_pred             hhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCC---------------------------------------
Confidence            34478889999999999999999999999998887765332                                       


Q ss_pred             hhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHH-cCCC----CCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy903          480 QASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLK-NGAN----IELGASTPLMEAAQEGHLELVRYLLDSGAQ  554 (739)
Q Consensus       480 ~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~-~~~~----~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~  554 (739)
                                          .+|||.|+..|+++.++.|++ .+..    -|..|.||||.|++.|+..+++.|++.|+.
T Consensus       307 --------------------~spLH~AA~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~  366 (929)
T KOG0510|consen  307 --------------------ESPLHFAAIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGAL  366 (929)
T ss_pred             --------------------CCchHHHHHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChh
Confidence                                366666666666777777776 2222    134567777777777777777777777766


Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHH
Q psy903          555 VHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTY  629 (739)
Q Consensus       555 ~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~  629 (739)
                      ...   .+                      .+|.+|.|+||.|+..|+..+|++|+.+|+++..+|+.|.|++++
T Consensus       367 ~~~---~~----------------------e~D~dg~TaLH~Aa~~g~~~av~~Li~~Ga~I~~~n~~g~SA~~~  416 (929)
T KOG0510|consen  367 FLN---MS----------------------EADSDGNTALHLAAKYGNTSAVQKLISHGADIGVKNKKGKSAFDT  416 (929)
T ss_pred             hhc---cc----------------------ccccCCchhhhHHHHhccHHHHHHHHHcCCceeeccccccccccc
Confidence            542   00                      115567778888888888888888888999999999999999987

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1e-41  Score=347.69  Aligned_cols=307  Identities=22%  Similarity=0.319  Sum_probs=273.7

Q ss_pred             hhhhhhcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            2 LVQACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      |..|+.+||++.|+.|++ .+..++..+.+|.||||.|+..|+.++|++|+++|++++..+..+. ||||.|+..|    
T Consensus         5 l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~tpL~~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~-t~L~~A~~~~----   79 (434)
T PHA02874          5 LRMCIYSGDIEAIEKIIKNKGNCINISVDETTTPLIDAIRSGDAKIVELFIKHGADINHINTKIP-HPLLTAIKIG----   79 (434)
T ss_pred             HHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHcC----
Confidence            678999999999999998 5666888889999999999999999999999999999998887776 9999999999    


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL  160 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L  160 (739)
                              ..++++.+........                       ..++...+.++++.|++.|++++..+..|.|||
T Consensus        80 --------~~~iv~~Ll~~g~~~~-----------------------~~~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~L  128 (434)
T PHA02874         80 --------AHDIIKLLIDNGVDTS-----------------------ILPIPCIEKDMIKTILDCGIDVNIKDAELKTFL  128 (434)
T ss_pred             --------CHHHHHHHHHCCCCCC-----------------------cchhccCCHHHHHHHHHCcCCCCCCCCCCccHH
Confidence                    7788888765532210                       113345678999999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHH
Q psy903          161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR  240 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~  240 (739)
                      |+|+..|+.+++++|++.|++++..+.. |.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+.++++
T Consensus       129 h~A~~~~~~~~v~~Ll~~gad~n~~d~~-g~tpLh~A~~~~~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~g~~~iv~  207 (434)
T PHA02874        129 HYAIKKGDLESIKMLFEYGADVNIEDDN-GCYPIHIAIKHNFFDIIKLLLEKGAYANVKDNNGESPLHNAAEYGDYACIK  207 (434)
T ss_pred             HHHHHCCCHHHHHHHHhCCCCCCCcCCC-CCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence            9999999999999999999999877654 569999999999999999999999999999999999999999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcC-CHHHHHHHHHcCCCCCCC
Q psy903          241 VLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKG-HLDMVRFLLSAGADQEHK  319 (739)
Q Consensus       241 ~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~-~~~~v~~Ll~~~~~~~~~  319 (739)
                      +|+++|++++..+..|.||||.|+..+. +.+++|+ .|.+++.. +..|.||||+|+..+ +.+++++|++.|++++..
T Consensus       208 ~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll-~~~~in~~-d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~  284 (434)
T PHA02874        208 LLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLI-NNASINDQ-DIDGSTPLHHAINPPCDIDIIDILLYHKADISIK  284 (434)
T ss_pred             HHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHH-cCCCCCCc-CCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCC
Confidence            9999999999999999999999999765 5667776 57777764 556999999999876 789999999999999999


Q ss_pred             CCcCCcHHHHHHhCC-chHHHHHHHHcCCC
Q psy903          320 TDEMHTALMEASMDG-HVEVAKLLLDSGAQ  348 (739)
Q Consensus       320 ~~~~~~~l~~a~~~~-~~~~~~~L~~~~~~  348 (739)
                      +..|.|||+.|+..+ ..++++.|+..+..
T Consensus       285 d~~g~TpL~~A~~~~~~~~~ik~ll~~~~~  314 (434)
T PHA02874        285 DNKGENPIDTAFKYINKDPVIKDIIANAVL  314 (434)
T ss_pred             CCCCCCHHHHHHHhCCccHHHHHHHHhcCc
Confidence            999999999999887 67889999987654

>KOG0510|consensus

Probab=100.00  E-value=1.4e-41  Score=331.74  Aligned_cols=359  Identities=27%  Similarity=0.349  Sum_probs=256.6

Q ss_pred             HHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCC
Q psy903          170 ELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV  249 (739)
Q Consensus       170 ~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~  249 (739)
                      |...++++....+...+..+ .|++|.|+..++.      +..-......|..++||||+|+.....+.+++|++.|+++
T Consensus        42 D~~tli~~kns~~~~~~~~g-d~~~~~~~~~~y~------~~~~~~~~a~D~~~n~~l~~a~~~~~~~~i~~Lls~gad~  114 (929)
T KOG0510|consen   42 DRHTLILEKNSSTPGKRAFG-DTELHHASARNYI------LSKLAISYAKDSADNTPLHAAVEYNQGDKIQVLLSYGADT  114 (929)
T ss_pred             HHHHHHHHhccccchhhhhc-hhHHHHHHhhcch------hhhhhhhhhhhcccCchhHHHhhcchHHHHHHHHhcCCCC
Confidence            55556666555555544443 3666666666543      2222333445666667777777766667777777777766


Q ss_pred             CCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHH
Q psy903          250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALME  329 (739)
Q Consensus       250 ~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~  329 (739)
                      ...+..+.+|+|+|+..++.+..+.|+++|.+++.. ++.+.||||.|+..++.|..+.|++.|+++...+.+|..|+|.
T Consensus       115 ~~~n~~~~aplh~A~~~~~~s~L~~Ll~~~~dvnl~-de~~~TpLh~A~~~~~~E~~k~Li~~~a~~~K~~~~~~~~iH~  193 (929)
T KOG0510|consen  115 PLRNLNKNAPLHLAADSGNYSCLKLLLDYGADVNLE-DENGFTPLHLAARKNKVEAKKELINKGADPCKSDIDGNFPIHE  193 (929)
T ss_pred             ChhhhhccCchhhccccchHHHHHHHHHhcCCcccc-ccCCCchhhHHHhcChHHHHHHHHhcCCCCCcccCcCCchHHH
Confidence            666666667777777666777777777766666653 3346667777777777776677777777777777777777777


Q ss_pred             HHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCC
Q psy903          330 ASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGES  409 (739)
Q Consensus       330 a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t  409 (739)
                      |+.+|..+..+.++....                                              .+++..++..+..+.+
T Consensus       194 aa~s~s~e~mEi~l~~~g----------------------------------------------~~r~~~in~~~n~~~~  227 (929)
T KOG0510|consen  194 AARSGSKECMEIFLPEHG----------------------------------------------YERQTHINFDNNEKAT  227 (929)
T ss_pred             HHHhcchhhhhhhhcccc----------------------------------------------chhhcccccccCCCCc
Confidence            777777777776665211                                              1233446667778888


Q ss_pred             HHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCc
Q psy903          410 LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGA  489 (739)
Q Consensus       410 ~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~  489 (739)
                      |||.|+..|+.++++.+++.+........                                                   
T Consensus       228 pLhlAve~g~~e~lk~~L~n~~~~a~~~~---------------------------------------------------  256 (929)
T KOG0510|consen  228 PLHLAVEGGDIEMLKMCLQNGKKIADVQL---------------------------------------------------  256 (929)
T ss_pred             chhhhhhcCCHHHHHHHHhCccccchhhh---------------------------------------------------
Confidence            88888888888888888887754332210                                                   


Q ss_pred             cccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903          490 KINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYA  569 (739)
Q Consensus       490 ~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A  569 (739)
                                             +..+..-+.-.+.|.+|.||||+|++.|+.+.++.|+..|++++.++.++.||||.|
T Consensus       257 -----------------------~~~~q~kelv~~~d~dg~tpLH~a~r~G~~~svd~Ll~~Ga~I~~kn~d~~spLH~A  313 (929)
T KOG0510|consen  257 -----------------------DAMQQEKELVNDEDNDGCTPLHYAARQGGPESVDNLLGFGASINSKNKDEESPLHFA  313 (929)
T ss_pred             -----------------------HHHHHHHHHhhcccccCCchHHHHHHcCChhHHHHHHHcCCcccccCCCCCCchHHH
Confidence                                   011111111124567788999999999999999999999999999999999999999


Q ss_pred             HHcCcHHHHHHHHh-CC------CCCCCCcHHHHHHHcCCHHHHHHHhhCCCCCC---cCCCCCCcHHHHHHHcCCHHHH
Q psy903          570 CENGHTDVADLLLS-YG------ANLDNSTMLIEAAKGGHANVVQLLLDFPRSVH---AKTQTGDTALTYACENGHTDVA  639 (739)
Q Consensus       570 ~~~~~~~iv~~Ll~-~~------~~~~~~~~l~~A~~~~~~~~v~~L~~~~~~~~---~~~~~g~t~l~~A~~~~~~~~v  639 (739)
                      +..|+...|+-|++ .+      .|..|.||||.|++.|+-++++.|++.|+..+   ..|.+|.||||.|+..|+..+|
T Consensus       314 A~yg~~ntv~rLL~~~~~rllne~D~~g~tpLHlaa~~gH~~v~qlLl~~GA~~~~~~e~D~dg~TaLH~Aa~~g~~~av  393 (929)
T KOG0510|consen  314 AIYGRINTVERLLQESDTRLLNESDLHGMTPLHLAAKSGHDRVVQLLLNKGALFLNMSEADSDGNTALHLAAKYGNTSAV  393 (929)
T ss_pred             HHcccHHHHHHHHhCcCccccccccccCCCchhhhhhcCHHHHHHHHHhcChhhhcccccccCCchhhhHHHHhccHHHH
Confidence            99999999999998 33      24458999999999999999999999999666   5699999999999999999999


Q ss_pred             HHHHHcCCCC-----CCchHHH
Q psy903          640 DLLLSYGANL-----DNSTMLI  656 (739)
Q Consensus       640 ~~L~~~~~~~-----~~~~~L~  656 (739)
                      ++|+.+|++.     .|.++++
T Consensus       394 ~~Li~~Ga~I~~~n~~g~SA~~  415 (929)
T KOG0510|consen  394 QKLISHGADIGVKNKKGKSAFD  415 (929)
T ss_pred             HHHHHcCCceeecccccccccc
Confidence            9999999975     3455555

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.9e-40  Score=345.45  Aligned_cols=288  Identities=23%  Similarity=0.281  Sum_probs=265.4

Q ss_pred             hhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcC---cHHHHHHHHHccccccccCCCCCcchhHHHhhccccc
Q psy903            3 VQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG---YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGK   79 (739)
Q Consensus         3 ~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~---~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~   79 (739)
                      +.|+..+++++|++|++.|++++..+..|+||||+|+..|   +.+++++|+++|++++..+..|. ||||+|+..|   
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~~g~-TpLh~A~~~~---   94 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPERCGF-TPLHLYLYNA---   94 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHcC---
Confidence            4578899999999999999999999999999999999999   99999999999999999988665 8888888766   


Q ss_pred             cccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcH
Q psy903           80 LATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL  159 (739)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~  159 (739)
                                                                            ...+++++|++.|++++..+..|.||
T Consensus        95 ------------------------------------------------------~~~~iv~lLl~~ga~in~~~~~g~tp  120 (471)
T PHA03095         95 ------------------------------------------------------TTLDVIKLLIKAGADVNAKDKVGRTP  120 (471)
T ss_pred             ------------------------------------------------------CcHHHHHHHHHcCCCCCCCCCCCCCH
Confidence                                                                  15899999999999999999999999


Q ss_pred             HHHHH--HcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC--cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhc--
Q psy903          160 LSLAC--SAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG--FIEIVRLLINHGADVNGQSSSGNTPLMYACAG--  233 (739)
Q Consensus       160 L~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~--~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~--  233 (739)
                      ||+|+  ..++.+++++|++.|++++..+..+ .||||+|+..+  +.+++++|+++|++++..+..|.||||+|+..  
T Consensus       121 Lh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g-~tpL~~a~~~~~~~~~iv~~Ll~~g~~~~~~d~~g~t~Lh~~~~~~~  199 (471)
T PHA03095        121 LHVYLSGFNINPKVIRLLLRKGADVNALDLYG-MTPLAVLLKSRNANVELLRLLIDAGADVYAVDDRFRSLLHHHLQSFK  199 (471)
T ss_pred             HHHHhhCCcCCHHHHHHHHHcCCCCCccCCCC-CCHHHHHHHcCCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHHCC
Confidence            99999  5678999999999999998777554 69999999876  68999999999999999999999999999875  


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCCh--HHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903          234 GHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHV--GVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS  311 (739)
Q Consensus       234 ~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~--~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  311 (739)
                      ++.++++.|++.|++++.+|..|.||||+|+..|+.  .+++.|++.|.+++... ..|.||||+|+..|+.+++++|++
T Consensus       200 ~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~~d-~~g~TpLh~A~~~~~~~~v~~LL~  278 (471)
T PHA03095        200 PRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINARN-RYGQTPLHYAAVFNNPRACRRLIA  278 (471)
T ss_pred             CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCCcC-CCCCCHHHHHHHcCCHHHHHHHHH
Confidence            788999999999999999999999999999999874  68899999999998865 669999999999999999999999


Q ss_pred             cCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCch
Q psy903          312 AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSV  350 (739)
Q Consensus       312 ~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~  350 (739)
                      .|++++..+..|.|||+.|+..++.+++++|++.+++..
T Consensus       279 ~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~  317 (471)
T PHA03095        279 LGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAE  317 (471)
T ss_pred             cCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHH
Confidence            999999999999999999999999999999999887653

>PHA02874 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.4e-38  Score=324.71  Aligned_cols=324  Identities=20%  Similarity=0.249  Sum_probs=273.5

Q ss_pred             HHHHHHhcCcHHHHHHHHHccc-cccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHH
Q psy903           34 LLSLACSAGYYELAQVLLAMHA-NVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALT  112 (739)
Q Consensus        34 ~L~~A~~~~~~~iv~~Ll~~ga-~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  112 (739)
                      .|..|+..|+.++++.|++.+. .++..+..+. ||||                                          
T Consensus         4 ~l~~ai~~gd~~~v~~ll~~~~~~~n~~~~~~~-tpL~------------------------------------------   40 (434)
T PHA02874          4 DLRMCIYSGDIEAIEKIIKNKGNCINISVDETT-TPLI------------------------------------------   40 (434)
T ss_pred             HHHHHHhcCCHHHHHHHHHcCCCCCCCcCCCCC-CHHH------------------------------------------
Confidence            5889999999999999998654 3544443333 5554                                          


Q ss_pred             hhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCc
Q psy903          113 RMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECT  192 (739)
Q Consensus       113 ~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t  192 (739)
                                      .|+..|+.+++++|++.|++++..+..|.||||.|+..|+.+++++|+++|+++...       
T Consensus        41 ----------------~A~~~g~~~iv~~Ll~~Ga~~n~~~~~~~t~L~~A~~~~~~~iv~~Ll~~g~~~~~~-------   97 (434)
T PHA02874         41 ----------------DAIRSGDAKIVELFIKHGADINHINTKIPHPLLTAIKIGAHDIIKLLIDNGVDTSIL-------   97 (434)
T ss_pred             ----------------HHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcc-------
Confidence                            455566899999999999999999999999999999999999999999999875321       


Q ss_pred             HHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHH
Q psy903          193 PLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA  272 (739)
Q Consensus       193 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii  272 (739)
                          +....+.+++++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++
T Consensus        98 ----~~~~~~~~~i~~ll~~g~d~n~~~~~g~T~Lh~A~~~~~~~~v~~Ll~~gad~n~~d~~g~tpLh~A~~~~~~~iv  173 (434)
T PHA02874         98 ----PIPCIEKDMIKTILDCGIDVNIKDAELKTFLHYAIKKGDLESIKMLFEYGADVNIEDDNGCYPIHIAIKHNFFDII  173 (434)
T ss_pred             ----hhccCCHHHHHHHHHCcCCCCCCCCCCccHHHHHHHCCCHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHCCcHHHH
Confidence                2344578999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhh
Q psy903          273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA  352 (739)
Q Consensus       273 ~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~  352 (739)
                      ++|+++|++++.. +..|.||||+|+..|+.+++++|++.|++++..+..|.||||.|+..+. +.+++|+. +.+.   
T Consensus       174 ~~Ll~~g~~~n~~-~~~g~tpL~~A~~~g~~~iv~~Ll~~g~~i~~~~~~g~TpL~~A~~~~~-~~i~~Ll~-~~~i---  247 (434)
T PHA02874        174 KLLLEKGAYANVK-DNNGESPLHNAAEYGDYACIKLLIDHGNHIMNKCKNGFTPLHNAIIHNR-SAIELLIN-NASI---  247 (434)
T ss_pred             HHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHCCh-HHHHHHHc-CCCC---
Confidence            9999999988764 4569999999999999999999999999999999999999999998765 56666663 3332   


Q ss_pred             hcccCCCCCCCCCCCCCcccccchHHHHHHhcC-CHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcC-cHHHHHHHHHcC
Q psy903          353 YARHDFFPNDKCERPSSISYTYSRSLVQACSDG-DVKTVKKLLTEGRSVHETTDEGESLLSLACSAG-YYELAQVLLAMH  430 (739)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~-~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~-~~~~v~~Ll~~~  430 (739)
                                     ........+|+++|+..+ +.+++++|+++|++++..+..|.|||+.|+..+ ..++++.|+..+
T Consensus       248 ---------------n~~d~~G~TpLh~A~~~~~~~~iv~~Ll~~gad~n~~d~~g~TpL~~A~~~~~~~~~ik~ll~~~  312 (434)
T PHA02874        248 ---------------NDQDIDGSTPLHHAINPPCDIDIIDILLYHKADISIKDNKGENPIDTAFKYINKDPVIKDIIANA  312 (434)
T ss_pred             ---------------CCcCCCCCCHHHHHHhcCCcHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHhCCccHHHHHHHHhc
Confidence                           122345678999999875 789999999999999999999999999999887 778999999988


Q ss_pred             CCcccccCCCCCcHHHHH
Q psy903          431 ANVEDRGIKGECTPLMEA  448 (739)
Q Consensus       431 ~~~~~~~~~~~~t~l~~a  448 (739)
                      ......+.....+++..+
T Consensus       313 ~~~~~~~~~~~~~~~~~~  330 (434)
T PHA02874        313 VLIKEADKLKDSDFLEHI  330 (434)
T ss_pred             CchhhccccchhHHHHHH
Confidence            766555444434444443

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.5e-39  Score=337.62  Aligned_cols=287  Identities=27%  Similarity=0.338  Sum_probs=263.7

Q ss_pred             cCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCC
Q psy903            8 DGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKL   87 (739)
Q Consensus         8 ~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~   87 (739)
                      ....++++++++.+...+..+..|.||||+|+..|+.++|++|+++|++++..+..+. ||+|++....           
T Consensus        12 ~~~~~~~~~~~~~~~~~~~~~~~~~t~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~-t~L~~~~~~~-----------   79 (480)
T PHA03100         12 IIKVKNIKYIIMEDDLNDYSYKKPVLPLYLAKEARNIDVVKILLDNGADINSSTKNNS-TPLHYLSNIK-----------   79 (480)
T ss_pred             HHHHHHHHHHHhcCccchhhhcccchhhhhhhccCCHHHHHHHHHcCCCCCCccccCc-CHHHHHHHHH-----------
Confidence            3456889999998877778889999999999999999999999999999988776664 8888744211           


Q ss_pred             CCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHH--H
Q psy903           88 ADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLAC--S  165 (739)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~--~  165 (739)
                                                                |+..|+.++++.|++.|++++..+..|.||||+|+  .
T Consensus        80 ------------------------------------------a~~~~~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~  117 (480)
T PHA03100         80 ------------------------------------------YNLTDVKEIVKLLLEYGANVNAPDNNGITPLLYAISKK  117 (480)
T ss_pred             ------------------------------------------HHhhchHHHHHHHHHCCCCCCCCCCCCCchhhHHHhcc
Confidence                                                      66677899999999999999999999999999999  9


Q ss_pred             cCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC--cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHH
Q psy903          166 AGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG--FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL  243 (739)
Q Consensus       166 ~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~--~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll  243 (739)
                      .|+.+++++|++.|++++..+.. |.||||+|+..+  +.+++++|+++|++++.++..|.||||+|+..|+.+++++|+
T Consensus       118 ~~~~~iv~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~~g~tpL~~A~~~~~~~iv~~Ll  196 (480)
T PHA03100        118 SNSYSIVEYLLDNGANVNIKNSD-GENLLHLYLESNKIDLKILKLLIDKGVDINAKNRYGYTPLHIAVEKGNIDVIKFLL  196 (480)
T ss_pred             cChHHHHHHHHHcCCCCCccCCC-CCcHHHHHHHcCCChHHHHHHHHHCCCCcccccCCCCCHHHHHHHhCCHHHHHHHH
Confidence            99999999999999998877655 569999999999  999999999999999999999999999999999999999999


Q ss_pred             HCCCCCCCCCCCC------CcHHHHHHhcCC--hHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy903          244 ECGANVEDHNENG------HTPLMEAASAGH--VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD  315 (739)
Q Consensus       244 ~~~~~~~~~~~~~------~t~L~~A~~~~~--~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~  315 (739)
                      ++|++++..+..|      .||||.|+..++  .+++++|+++|++++... ..|.||||+|+..++.+++++|++.|++
T Consensus       197 ~~ga~~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~iv~~Ll~~g~din~~d-~~g~TpL~~A~~~~~~~iv~~Ll~~gad  275 (480)
T PHA03100        197 DNGADINAGDIETLLFTIFETPLHIAACYNEITLEVVNYLLSYGVPINIKD-VYGFTPLHYAVYNNNPEFVKYLLDLGAN  275 (480)
T ss_pred             HcCCCccCCCCCCCcHHHHHhHHHHHHHhCcCcHHHHHHHHHcCCCCCCCC-CCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            9999999999888      899999999999  999999999999988754 5699999999999999999999999999


Q ss_pred             CCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCch
Q psy903          316 QEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSV  350 (739)
Q Consensus       316 ~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~  350 (739)
                      ++..+..|.||++.|+..++.+++++|+++|++..
T Consensus       276 ~n~~d~~g~tpl~~A~~~~~~~iv~~Ll~~g~~i~  310 (480)
T PHA03100        276 PNLVNKYGDTPLHIAILNNNKEIFKLLLNNGPSIK  310 (480)
T ss_pred             CCccCCCCCcHHHHHHHhCCHHHHHHHHhcCCCHH
Confidence            99999999999999999999999999999998754

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.4e-38  Score=329.28  Aligned_cols=286  Identities=22%  Similarity=0.235  Sum_probs=247.7

Q ss_pred             hhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhc--CcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccC
Q psy903            6 CSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA--GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATG   83 (739)
Q Consensus         6 ~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~   83 (739)
                      ....+.++|++|++.|+++|.. ..|.||||+++..  ++.++|++|+++||+++..+ .++ ||||.|+.++.      
T Consensus        11 ~~~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~-~~~-tpL~~a~~~~~------   81 (494)
T PHA02989         11 SDTVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG-YIE-TPLCAVLRNRE------   81 (494)
T ss_pred             CCcCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC-CCC-CcHHHHHhccC------
Confidence            3468999999999999999998 6799999876654  37899999999999999876 344 99998887651      


Q ss_pred             CCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHH
Q psy903           84 DGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLA  163 (739)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A  163 (739)
                                                                    ....+..+++++|++.|++++.++..|.||||.|
T Consensus        82 ----------------------------------------------~~~~~~~~iv~~Ll~~Gadin~~d~~g~tpL~~a  115 (494)
T PHA02989         82 ----------------------------------------------ITSNKIKKIVKLLLKFGADINLKTFNGVSPIVCF  115 (494)
T ss_pred             ----------------------------------------------cchhhHHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Confidence                                                          0124567999999999999999999999999988


Q ss_pred             HHc---CcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHc--CcHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHhcC---
Q psy903          164 CSA---GYYELAQVLLAMHANVEDRGIKGECTPLMEAASS--GFIEIVRLLINHGADVNG-QSSSGNTPLMYACAGG---  234 (739)
Q Consensus       164 ~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~--~~~~~~~~Ll~~g~~~~~-~~~~~~t~L~~A~~~~---  234 (739)
                      +..   |+.+++++|+++|++++...+..|+||||+|+..  ++.+++++|+++|++++. .+..|.||||.|+..+   
T Consensus       116 ~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~~Gadi~~~~~~~g~tpL~~a~~~~~~~  195 (494)
T PHA02989        116 IYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLSFGVNLFEKTSLYGLTPMNIYLRNDIDV  195 (494)
T ss_pred             HHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCccccccccCCChHHHHHhccccc
Confidence            765   6899999999999999444445678999999765  689999999999999998 6889999999998754   


Q ss_pred             -cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhc------CChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHH
Q psy903          235 -HEAVVRVLLECGANVEDHNENGHTPLMEAASA------GHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVR  307 (739)
Q Consensus       235 -~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~------~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~  307 (739)
                       +.+++++|+++|++++..+..+.|||+.++..      +..+++++|+. +++++.. +..|.||||+|+..++.++++
T Consensus       196 ~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~~~~~~~~~il~~l~~-~advn~~-d~~G~TpL~~Aa~~~~~~~v~  273 (494)
T PHA02989        196 ISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNKILSKKEFKVLNFILK-YIKINKK-DKKGFNPLLISAKVDNYEAFN  273 (494)
T ss_pred             ccHHHHHHHHhCCCCccccCCccccHHHHHHHhchhhcccchHHHHHHHh-CCCCCCC-CCCCCCHHHHHHHhcCHHHHH
Confidence             89999999999999999999999999987754      35778887765 5888775 456999999999999999999


Q ss_pred             HHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCC
Q psy903          308 FLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQ  348 (739)
Q Consensus       308 ~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~  348 (739)
                      +|++.|++++.++..|.|||++|+..++.+++++|++.++.
T Consensus       274 ~LL~~Gadin~~d~~G~TpL~~A~~~~~~~iv~~LL~~~p~  314 (494)
T PHA02989        274 YLLKLGDDIYNVSKDGDTVLTYAIKHGNIDMLNRILQLKPG  314 (494)
T ss_pred             HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhcCCC
Confidence            99999999999999999999999999999999999987654

>PHA03100 ankyrin repeat protein; Provisional

Probab=100.00  E-value=1.1e-38  Score=332.82  Aligned_cols=260  Identities=27%  Similarity=0.389  Sum_probs=237.9

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHH-----HHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSL-----ACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS   75 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~-----A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~   75 (739)
                      |||.|+..|+.++|+.|++.|++++..+..|.||||+     |+..|+.+++++|+++|++++..+..|. ||||+|+..
T Consensus        38 ~L~~A~~~~~~~ivk~Ll~~g~~~~~~~~~~~t~L~~~~~~~a~~~~~~~iv~~Ll~~ga~i~~~d~~g~-tpL~~A~~~  116 (480)
T PHA03100         38 PLYLAKEARNIDVVKILLDNGADINSSTKNNSTPLHYLSNIKYNLTDVKEIVKLLLEYGANVNAPDNNGI-TPLLYAISK  116 (480)
T ss_pred             hhhhhhccCCHHHHHHHHHcCCCCCCccccCcCHHHHHHHHHHHhhchHHHHHHHHHCCCCCCCCCCCCC-chhhHHHhc
Confidence            7999999999999999999999999999999999999     9999999999999999999988776665 888887720


Q ss_pred             cccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCC
Q psy903           76 GFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDE  155 (739)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~  155 (739)
                                                                              ..|+.+++++|++.|++++..+..
T Consensus       117 --------------------------------------------------------~~~~~~iv~~Ll~~g~~~~~~~~~  140 (480)
T PHA03100        117 --------------------------------------------------------KSNSYSIVEYLLDNGANVNIKNSD  140 (480)
T ss_pred             --------------------------------------------------------ccChHHHHHHHHHcCCCCCccCCC
Confidence                                                                    235789999999999999999999


Q ss_pred             CCcHHHHHHHcC--cHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCC------CcHH
Q psy903          156 GESLLSLACSAG--YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSG------NTPL  227 (739)
Q Consensus       156 g~t~L~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~------~t~L  227 (739)
                      |.||||+|+..|  +.+++++|+++|++++..+. .|.||||+|+..|+.+++++|+++|++++..+..|      .|||
T Consensus       141 g~t~L~~A~~~~~~~~~iv~~Ll~~g~din~~d~-~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~t~l  219 (480)
T PHA03100        141 GENLLHLYLESNKIDLKILKLLIDKGVDINAKNR-YGYTPLHIAVEKGNIDVIKFLLDNGADINAGDIETLLFTIFETPL  219 (480)
T ss_pred             CCcHHHHHHHcCCChHHHHHHHHHCCCCcccccC-CCCCHHHHHHHhCCHHHHHHHHHcCCCccCCCCCCCcHHHHHhHH
Confidence            999999999999  99999999999999887776 56799999999999999999999999999998888      8999


Q ss_pred             HHHHhcCc--HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHH
Q psy903          228 MYACAGGH--EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM  305 (739)
Q Consensus       228 ~~A~~~~~--~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~  305 (739)
                      |.|+..++  .+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+..++.++
T Consensus       220 ~~a~~~~~~~~~iv~~Ll~~g~din~~d~~g~TpL~~A~~~~~~~iv~~Ll~~gad~n~~-d~~g~tpl~~A~~~~~~~i  298 (480)
T PHA03100        220 HIAACYNEITLEVVNYLLSYGVPINIKDVYGFTPLHYAVYNNNPEFVKYLLDLGANPNLV-NKYGDTPLHIAILNNNKEI  298 (480)
T ss_pred             HHHHHhCcCcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcc-CCCCCcHHHHHHHhCCHHH
Confidence            99999999  99999999999999999999999999999999999999999999988875 4559999999999999999


Q ss_pred             HHHHHHcCCCCCCC
Q psy903          306 VRFLLSAGADQEHK  319 (739)
Q Consensus       306 v~~Ll~~~~~~~~~  319 (739)
                      +++|+++|++++..
T Consensus       299 v~~Ll~~g~~i~~i  312 (480)
T PHA03100        299 FKLLLNNGPSIKTI  312 (480)
T ss_pred             HHHHHhcCCCHHHH
Confidence            99999999877643

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=7.7e-38  Score=323.09  Aligned_cols=312  Identities=21%  Similarity=0.226  Sum_probs=256.8

Q ss_pred             hhhhhhcCCHHHHHHHHHc----CCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccc
Q psy903            2 LVQACSDGDVKTVKKLLTE----GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF   77 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~~----g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~   77 (739)
                      |+.++...+.+-+...++.    +.-.+.....+.||||+|+..|+.++|++|+++|++++..+..|. ||||+|+..| 
T Consensus         4 ~~~~~~~~~~~~i~~~i~~~~~~~~~~~~~~~~~~tPLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~-TpLh~A~~~g-   81 (477)
T PHA02878          4 LYKSMYTDNYETILKYIEYIDHTENYSTSASLIPFIPLHQAVEARNLDVVKSLLTRGHNVNQPDHRDL-TPLHIICKEP-   81 (477)
T ss_pred             HHHHHHhccHHHHHHHHHHHhhhhhhcCcccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHCc-
Confidence            6777777776445555442    222344456789999999999999999999999999999988776 9999999998 


Q ss_pred             cccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCC
Q psy903           78 GKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGE  157 (739)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~  157 (739)
                                 ..+.+..+......               .....+.++++.|+..++.++++.|+..+.+.......  
T Consensus        82 -----------~~~~v~~Ll~~~~~---------------~~~~~~~~~l~~a~~~~~~ei~~~Ll~~~~~~~~~~~~--  133 (477)
T PHA02878         82 -----------NKLGMKEMIRSINK---------------CSVFYTLVAIKDAFNNRNVEIFKIILTNRYKNIQTIDL--  133 (477)
T ss_pred             -----------cHhHHHHHHHHHhc---------------cccccchhhHHHHHHcCCHHHHHHHHhCcccCcccCcH--
Confidence                       66666666543211               11134578999999999999999999886543221110  


Q ss_pred             cHHHHHHHc--CcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCc
Q psy903          158 SLLSLACSA--GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH  235 (739)
Q Consensus       158 t~L~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~  235 (739)
                      ..+......  ...+++++|+++|++++..+...|.||||+|+..|+.+++++|+++|++++.+|..|.||||.|+..++
T Consensus       134 ~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~g~tpLh~A~~~~~  213 (477)
T PHA02878        134 VYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGNTALHYATENKDQRLTELLLSYGANVNIPDKTNNSPLHHAVKHYN  213 (477)
T ss_pred             HHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCCCHHHHHHhCCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCC
Confidence            111111112  235699999999999998887757899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhc-CChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCC
Q psy903          236 EAVVRVLLECGANVEDHNENGHTPLMEAASA-GHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA  314 (739)
Q Consensus       236 ~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~-~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~  314 (739)
                      .+++++|++.|++++.+|..|.||||+|+.. ++.+++++|+++|++++......|.||||.|  .++.+++++|++.|+
T Consensus       214 ~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~ga  291 (477)
T PHA02878        214 KPIVHILLENGASTDARDKCGNTPLHISVGYCKDYDILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGA  291 (477)
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCHHHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCC
Confidence            9999999999999999999999999999975 7899999999999999987766799999999  567899999999999


Q ss_pred             CCCCCCCcCCcHHHHHHhCC-chHHHHHHHHc
Q psy903          315 DQEHKTDEMHTALMEASMDG-HVEVAKLLLDS  345 (739)
Q Consensus       315 ~~~~~~~~~~~~l~~a~~~~-~~~~~~~L~~~  345 (739)
                      +++..+..|.|||+.|+..+ ..++.++|+..
T Consensus       292 din~~d~~g~TpL~~A~~~~~~~~~~~~li~~  323 (477)
T PHA02878        292 DINSLNSYKLTPLSSAVKQYLCINIGRILISN  323 (477)
T ss_pred             CCCCcCCCCCCHHHHHHHHcCccchHHHHHHH
Confidence            99999999999999999754 56778887764

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=5.4e-38  Score=291.06  Aligned_cols=237  Identities=18%  Similarity=0.166  Sum_probs=205.0

Q ss_pred             hcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCC
Q psy903            7 SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGK   86 (739)
Q Consensus         7 ~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~   86 (739)
                      ..++.++++.|+++|+.  ..|.+|+||||+|+..|+.+++++|+++|++++..+  + .||||+|+.            
T Consensus         8 ~~~~~~~~~~Lis~~a~--~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d--~-~TpLh~Aa~------------   70 (284)
T PHA02791          8 TWKSKQLKSFLSSKDAF--KADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE--N-EFPLHQAAT------------   70 (284)
T ss_pred             ccCHHHHHHHHHhCCCC--CCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC--C-CCHHHHHHH------------
Confidence            35788999999998874  689999999999999999999999999999887543  2 366666554            


Q ss_pred             CCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHc
Q psy903           87 LADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA  166 (739)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~  166 (739)
                                                                    .|+.++++.|++.|++++.++..|.||||+|+..
T Consensus        71 ----------------------------------------------~g~~eiV~lLL~~Gadvn~~d~~G~TpLh~Aa~~  104 (284)
T PHA02791         71 ----------------------------------------------LEDTKIVKILLFSGMDDSQFDDKGNTALYYAVDS  104 (284)
T ss_pred             ----------------------------------------------CCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHc
Confidence                                                          4578999999999999999999999999999999


Q ss_pred             CcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHhcCcHHHHHHHHHC
Q psy903          167 GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS-SSGNTPLMYACAGGHEAVVRVLLEC  245 (739)
Q Consensus       167 ~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~L~~A~~~~~~~~v~~Ll~~  245 (739)
                      |+.+++++|++.|++++..+..++.||||+|+..|+.+++++|++++.+.  .+ ..|.||||+|+..|+.+++++|+++
T Consensus       105 g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~--~d~~~g~TpLh~Aa~~g~~eiv~lLL~~  182 (284)
T PHA02791        105 GNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPST--FDLAILLSCIHITIKNGHVDMMILLLDY  182 (284)
T ss_pred             CCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCcc--cccccCccHHHHHHHcCCHHHHHHHHHC
Confidence            99999999999999998776665458999999999999999999987643  23 2579999999999999999999999


Q ss_pred             CCCCCCCCCCCCcH-HHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCC
Q psy903          246 GANVEDHNENGHTP-LMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQ  316 (739)
Q Consensus       246 ~~~~~~~~~~~~t~-L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~  316 (739)
                      |++++.++..|.|| ||+|+..|+.+++++|+++|++++....  +.++|      ++.|++++|+++-++.
T Consensus       183 gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~in~~~~--~~~~l------~~~e~~~~ll~~~~~~  246 (284)
T PHA02791        183 MTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINIYSVNL--ENVLL------DDAEIAKMIIEKHVEY  246 (284)
T ss_pred             CCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCCccCcc--cCccC------CCHHHHHHHHHhhhhh
Confidence            99999999999987 9999999999999999999999877543  33444      7889999999886554

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.3e-36  Score=302.17  Aligned_cols=407  Identities=18%  Similarity=0.231  Sum_probs=265.0

Q ss_pred             HHHHHHHcCCHH--HHHHHHhcCCCCCcCCCCCCcHHHHHHHcCc-HHHHHHHHhCCCCccccCCCCCCcHHHH-HHHcC
Q psy903          126 SLVQACSDGDVK--TVKKLLTEGRSVHETTDEGESLLSLACSAGY-YELAQVLLAMHANVEDRGIKGECTPLME-AASSG  201 (739)
Q Consensus       126 ~l~~A~~~~~~~--~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~-~~~v~~Ll~~~~~~~~~~~~~~~t~L~~-A~~~~  201 (739)
                      .|...|+.=+.+  ..+.|++.|+++-. ..+|.||||.-..+.+ ..-++.++..+..++..+..+ .+++|+ |+.+|
T Consensus         6 ~~~~~~~~~~~~~~~~~~l~~~g~~~~~-~~~~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~n~~~-~~~~~~~~s~n~   83 (631)
T PHA02792          6 ILYDSCKTFNIDACSAQSLIESGANPLY-EYDGETPLKAYVTKKNNNIKNDVVILLLSSVDYKNIND-FDIFEYLCSDNI   83 (631)
T ss_pred             HHHhHhhccchhHHHHHHHHHcCCCccc-ccCCCccHHHHHhhhhhhHHHHHHHHHHhCCCcCccCC-ccHHHHHHHhcc
Confidence            355555544333  35788999999877 5778899999875544 334556666666666655444 578876 56688


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHh-cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCCh-HHHHHHH--H
Q psy903          202 FIEIVRLLINHGADVNGQSSSGNTPLMYACA-GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHV-GVAKILL--E  277 (739)
Q Consensus       202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~-~ii~~Ll--~  277 (739)
                      +.|++++|+++|+++|.++..+.+|+++|+. .++.|++++|+++|+++...+..|.||++.-+.+... +.-..+-  +
T Consensus        84 ~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~  163 (631)
T PHA02792         84 DIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNIQYGYKIIIEQITRAEYYNWDDELDDYD  163 (631)
T ss_pred             cHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCcccccccCcchhhhhcccccccchhhhccccc
Confidence            9999999999999999999999999999966 6999999999999999988899999999876654321 1111111  1


Q ss_pred             cCCCCcccCcCccCCHHHHHHHcC-------CHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCC--chHHHHHHHHcCCC
Q psy903          278 YGAGINTHSNEFKESALTLACYKG-------HLDMVRFLLSAGADQEHKTDEMHTALMEASMDG--HVEVAKLLLDSGAQ  348 (739)
Q Consensus       278 ~~~~~~~~~~~~~~~~l~~A~~~~-------~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~L~~~~~~  348 (739)
                      ++-.++ ..+..|.||||+|+..+       +.++++.|+++|++++..+..|.||||+|+...  ..|++++|++..-.
T Consensus       164 ~~~~i~-~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~~~~~  242 (631)
T PHA02792        164 YDYTTD-YDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFDSNYS  242 (631)
T ss_pred             cccccc-cCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHhcccc
Confidence            223333 34566999999999999       899999999999999999999999999999999  88999999874111


Q ss_pred             chhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcC--CHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHH
Q psy903          349 SVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDG--DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVL  426 (739)
Q Consensus       349 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~--~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~L  426 (739)
                      .+               .+......+.. ..+.....  +..++..|++.+....        .+.......+.+.+..+
T Consensus       243 ~~---------------~~~~~l~~y~~-~~~~~~~~~id~~iv~~ll~~~~~~~--------i~~~~~~~~~~~~~~~~  298 (631)
T PHA02792        243 GN---------------ELMNILSNYLR-KQYRNKNHKIDNYIVDKLLSGHDTFY--------ILELCNSLRNNIIISSI  298 (631)
T ss_pred             cc---------------chHhHHHHHHH-HHhccCccCccHHHHHHHHhCCCccc--------hhhhhhhhhhhhHHHHH
Confidence            00               00000000000 00000001  1224444444322111        00000111111111111


Q ss_pred             HHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHH
Q psy903          427 LAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLA  506 (739)
Q Consensus       427 l~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a  506 (739)
                      +.+..+                       .+                                          +..|+.-
T Consensus       299 ~~~~~~-----------------------~~------------------------------------------q~~l~~Y  313 (631)
T PHA02792        299 LKRYTD-----------------------SI------------------------------------------QDLLSEY  313 (631)
T ss_pred             HHHHhH-----------------------HH------------------------------------------HHHHHHH
Confidence            111000                       00                                          1233333


Q ss_pred             HhcC--CHHHHHHHHHcCCCCCC-CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCC--CcHHHHHHHcCcHHHHHHH
Q psy903          507 CCGG--FLDVADFLLKNGANIEL-GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTG--DTALTYACENGHTDVADLL  581 (739)
Q Consensus       507 ~~~~--~~~~v~~Ll~~~~~~~~-~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g--~t~l~~A~~~~~~~iv~~L  581 (739)
                      ...+  +.+++++|++.|++... .....++.|+..++.+++++|+++|++++.+|..|  .||||.|......++    
T Consensus       314 l~~~~v~ieiIK~LId~Ga~~~r~~~~n~~~~Aa~~gn~eIVelLIs~GADIN~kD~~g~~~TpLh~A~~n~~~~v----  389 (631)
T PHA02792        314 VSYHTVYINVIKCMIDEGATLYRFKHINKYFQKFDNRDPKVVEYILKNGNVVVEDDDNIINIMPLFPTLSIHESDV----  389 (631)
T ss_pred             HhcCCccHHHHHHHHHCCCccccCCcchHHHHHHHcCCHHHHHHHHHcCCchhhhcCCCCChhHHHHHHHhccHhH----
Confidence            3444  57889999999887743 34567888888889999999999999988888775  578887665543322    


Q ss_pred             HhCCCCCCCCcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCC
Q psy903          582 LSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL  649 (739)
Q Consensus       582 l~~~~~~~~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~  649 (739)
                                           .+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++.
T Consensus       390 ---------------------~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADI  436 (631)
T PHA02792        390 ---------------------LSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADI  436 (631)
T ss_pred             ---------------------HHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCC
Confidence                                 23556666666777777777777777777777777777777766653

>KOG0508|consensus

Probab=100.00  E-value=6.6e-38  Score=286.25  Aligned_cols=223  Identities=32%  Similarity=0.472  Sum_probs=192.4

Q ss_pred             hhhhhcCCHHHHHHHHHcCC-----CCcccCCCCCcHHHHHHhcCcHHHHHHHHH-ccccccccCCCCCcchhHHHhhcc
Q psy903            3 VQACSDGDVKTVKKLLTEGR-----SVHETTDEGESLLSLACSAGYYELAQVLLA-MHANVEDRGIKGECTPLMEAASSG   76 (739)
Q Consensus         3 ~~A~~~g~~~~v~~ll~~g~-----~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~-~ga~~~~~~~~~~~t~l~~a~~~~   76 (739)
                      +.|++.|.+..++.|+....     +.-....+|.|||-+|+++|+.++|++|++ .++++..    +| +.        
T Consensus         9 ~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~----~G-sV--------   75 (615)
T KOG0508|consen    9 INAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQ----GG-SV--------   75 (615)
T ss_pred             HHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccC----Cc-eE--------
Confidence            47899999999999987532     123346789999999999999999999999 5666642    22 10        


Q ss_pred             ccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCC
Q psy903           77 FGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEG  156 (739)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g  156 (739)
                                                            ........+.+||..|+..|++++|+.|+++|+++|.....+
T Consensus        76 --------------------------------------~FDge~IegappLWaAsaAGHl~vVk~L~~~ga~VN~tT~TN  117 (615)
T KOG0508|consen   76 --------------------------------------RFDGETIEGAPPLWAASAAGHLEVVKLLLRRGASVNDTTRTN  117 (615)
T ss_pred             --------------------------------------EeCCcccCCCchhhHHhccCcHHHHHHHHHhcCccccccccC
Confidence                                                  001224467788999999999999999999999999999999


Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcH
Q psy903          157 ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE  236 (739)
Q Consensus       157 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~  236 (739)
                      .|||--||..|++++|+||+++|++++..+..+ .|.||+||..|+.+|+++|++.|+|+|.++..|+|+||.++..|+.
T Consensus       118 StPLraACfDG~leivKyLvE~gad~~IanrhG-hTcLmIa~ykGh~~I~qyLle~gADvn~ks~kGNTALH~caEsG~v  196 (615)
T KOG0508|consen  118 STPLRAACFDGHLEIVKYLVEHGADPEIANRHG-HTCLMIACYKGHVDIAQYLLEQGADVNAKSYKGNTALHDCAESGSV  196 (615)
T ss_pred             CccHHHHHhcchhHHHHHHHHcCCCCcccccCC-CeeEEeeeccCchHHHHHHHHhCCCcchhcccCchHHHhhhhcccH
Confidence            999999999999999999999999998877554 6999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          237 AVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       237 ~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                      |++++|+++|+.++ +|..|.|||..|...|+.+++++|++.
T Consensus       197 divq~Ll~~ga~i~-~d~~GmtPL~~Aa~tG~~~iVe~L~~~  237 (615)
T KOG0508|consen  197 DIVQLLLKHGAKID-VDGHGMTPLLLAAVTGHTDIVERLLQC  237 (615)
T ss_pred             HHHHHHHhCCceee-ecCCCCchHHHHhhhcchHHHHHHhcC
Confidence            99999999998876 567799999999999999999999974

>PHA03095 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.7e-37  Score=320.79  Aligned_cols=289  Identities=24%  Similarity=0.287  Sum_probs=263.6

Q ss_pred             HHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcC---cHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC-cH
Q psy903          128 VQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG---YYELAQVLLAMHANVEDRGIKGECTPLMEAASSG-FI  203 (739)
Q Consensus       128 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~---~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~-~~  203 (739)
                      ..++..++.+++++|++.|++++..+..|.||||+|+..+   +.+++++|++.|++++..+. .|.||||+|+..+ ..
T Consensus        19 ~~~~~~~~~~~v~~Ll~~ga~vn~~~~~g~t~Lh~a~~~~~~~~~~iv~~Ll~~Gadin~~~~-~g~TpLh~A~~~~~~~   97 (471)
T PHA03095         19 LLNASNVTVEEVRRLLAAGADVNFRGEYGKTPLHLYLHYSSEKVKDIVRLLLEAGADVNAPER-CGFTPLHLYLYNATTL   97 (471)
T ss_pred             HHcCCCCCHHHHHHHHHcCCCcccCCCCCCCHHHHHHHhcCCChHHHHHHHHHCCCCCCCCCC-CCCCHHHHHHHcCCcH
Confidence            4566788999999999999999999999999999999998   99999999999999998876 5679999999999 59


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHH--hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC--ChHHHHHHHHcC
Q psy903          204 EIVRLLINHGADVNGQSSSGNTPLMYAC--AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG--HVGVAKILLEYG  279 (739)
Q Consensus       204 ~~~~~Ll~~g~~~~~~~~~~~t~L~~A~--~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~--~~~ii~~Ll~~~  279 (739)
                      +++++|+++|++++.++..|.||||+|+  ..++.+++++|+++|++++..|..|.||||.|+..+  +.+++++|+++|
T Consensus        98 ~iv~lLl~~ga~in~~~~~g~tpLh~a~~~~~~~~~iv~~Ll~~gad~~~~d~~g~tpL~~a~~~~~~~~~iv~~Ll~~g  177 (471)
T PHA03095         98 DVIKLLIKAGADVNAKDKVGRTPLHVYLSGFNINPKVIRLLLRKGADVNALDLYGMTPLAVLLKSRNANVELLRLLIDAG  177 (471)
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHhhCCcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCCCHHHHHHHHHcC
Confidence            9999999999999999999999999999  556889999999999999999999999999999876  689999999999


Q ss_pred             CCCcccCcCccCCHHHHHHHc--CCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCch--HHHHHHHHcCCCchhhhcc
Q psy903          280 AGINTHSNEFKESALTLACYK--GHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHV--EVAKLLLDSGAQSVSAYAR  355 (739)
Q Consensus       280 ~~~~~~~~~~~~~~l~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~--~~~~~L~~~~~~~~~~~~~  355 (739)
                      +++... +..|.|+||.++..  ++.++++.|++.|++++.++..|.||||+|+..++.  .+++.|++.|.++..    
T Consensus       178 ~~~~~~-d~~g~t~Lh~~~~~~~~~~~i~~~Ll~~g~~~~~~d~~g~tpLh~Aa~~~~~~~~~v~~ll~~g~din~----  252 (471)
T PHA03095        178 ADVYAV-DDRFRSLLHHHLQSFKPRARIVRELIRAGCDPAATDMLGNTPLHSMATGSSCKRSLVLPLLIAGISINA----  252 (471)
T ss_pred             CCCccc-CCCCCCHHHHHHHHCCCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCchHHHHHHHHHcCCCCCC----
Confidence            999887 67799999999975  688999999999999999999999999999999875  578888988876432    


Q ss_pred             cCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCccc
Q psy903          356 HDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED  435 (739)
Q Consensus       356 ~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~  435 (739)
                                    ......+|++.|+..|+.+++++|++.|++++..+..|.||++.|+..++.+++++|++.+++...
T Consensus       253 --------------~d~~g~TpLh~A~~~~~~~~v~~LL~~gad~n~~~~~g~tpl~~A~~~~~~~~v~~LL~~~~~~~~  318 (471)
T PHA03095        253 --------------RNRYGQTPLHYAAVFNNPRACRRLIALGADINAVSSDGNTPLSLMVRNNNGRAVRAALAKNPSAET  318 (471)
T ss_pred             --------------cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCCHHHHHHHHHhCCCHHH
Confidence                          234566889999999999999999999999999999999999999999999999999999887654


Q ss_pred             c
Q psy903          436 R  436 (739)
Q Consensus       436 ~  436 (739)
                      .
T Consensus       319 ~  319 (471)
T PHA03095        319 V  319 (471)
T ss_pred             H
Confidence            3

>PHA02792 ankyrin-like protein; Provisional

Probab=100.00  E-value=3.5e-36  Score=299.15  Aligned_cols=361  Identities=14%  Similarity=0.068  Sum_probs=260.1

Q ss_pred             HHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHH-cCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc-HHHHHH
Q psy903          131 CSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACS-AGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF-IEIVRL  208 (739)
Q Consensus       131 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~-~~~~~~  208 (739)
                      ...|++|++++|+++|++++..+..+.+|+++|+. .++.|++++|+++|+++.... ..|+||++.-+.... .+.-..
T Consensus        80 s~n~~lElvk~LI~~GAdvN~~~n~~~~~l~ya~~~~~~~eivk~Ll~~Gad~~~~~-~~g~~~~~~~~~~~~~~~~~~~  158 (631)
T PHA02792         80 SDNIDIELLKLLISKGLEINSIKNGINIVEKYATTSNPNVDVFKLLLDKGIPTCSNI-QYGYKIIIEQITRAEYYNWDDE  158 (631)
T ss_pred             HhcccHHHHHHHHHcCCCcccccCCCCcceeEeecCCCChHHHHHHHHCCCCccccc-ccCcchhhhhcccccccchhhh
Confidence            34689999999999999999999999999999966 699999999999999876555 446899988776432 111111


Q ss_pred             HH--HCCCCCCCCCCCCCcHHHHHHhcC-------cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC--ChHHHHHHHH
Q psy903          209 LI--NHGADVNGQSSSGNTPLMYACAGG-------HEAVVRVLLECGANVEDHNENGHTPLMEAASAG--HVGVAKILLE  277 (739)
Q Consensus       209 Ll--~~g~~~~~~~~~~~t~L~~A~~~~-------~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~--~~~ii~~Ll~  277 (739)
                      +-  +.|..+|..|..|.||||+|+.++       +.+++++|+++|++++..|..|.||||+|+.+.  +.|++++|++
T Consensus       159 ~~~~~~~~~i~~~~~~g~t~L~~~i~~~s~~~~~~~~~v~k~Li~~g~~~~~~d~~g~t~l~~~~~~~~i~~ei~~~L~~  238 (631)
T PHA02792        159 LDDYDYDYTTDYDDRMGKTVLYYYIITRSQDGYATSLDVINYLISHEKEMRYYTYREHTTLYYYVDKCDIKREIFDALFD  238 (631)
T ss_pred             ccccccccccccCCCCCCchHHHHHhhCCcccccCCHHHHHHHHhCCCCcCccCCCCChHHHHHHHcccchHHHHHHHHh
Confidence            11  124556778999999999999999       899999999999999999999999999999999  8999999998


Q ss_pred             cCCCCcccCcCccCCHHHHHHH--c------CCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCc
Q psy903          278 YGAGINTHSNEFKESALTLACY--K------GHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQS  349 (739)
Q Consensus       278 ~~~~~~~~~~~~~~~~l~~A~~--~------~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~  349 (739)
                      ..-+.     ...+..|..-.+  .      -+..+|..|++.+..-+..        ........-+.+..++....++
T Consensus       239 ~~~~~-----~~~~~~l~~y~~~~~~~~~~~id~~iv~~ll~~~~~~~i~--------~~~~~~~~~~~~~~~~~~~~~~  305 (631)
T PHA02792        239 SNYSG-----NELMNILSNYLRKQYRNKNHKIDNYIVDKLLSGHDTFYIL--------ELCNSLRNNIIISSILKRYTDS  305 (631)
T ss_pred             ccccc-----cchHhHHHHHHHHHhccCccCccHHHHHHHHhCCCccchh--------hhhhhhhhhhHHHHHHHHHhHH
Confidence            42111     112223332221  1      1345888888765422111        0000111111222221111111


Q ss_pred             hhhhcccCCCCCCCCCCCCCcccccchHHHHHHhc--CCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHH
Q psy903          350 VSAYARHDFFPNDKCERPSSISYTYSRSLVQACSD--GDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL  427 (739)
Q Consensus       350 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~--~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll  427 (739)
                      .                        ...++.=...  -+.+++++|+++|++...  ......++.|+..++.+++++|+
T Consensus       306 ~------------------------q~~l~~Yl~~~~v~ieiIK~LId~Ga~~~r--~~~~n~~~~Aa~~gn~eIVelLI  359 (631)
T PHA02792        306 I------------------------QDLLSEYVSYHTVYINVIKCMIDEGATLYR--FKHINKYFQKFDNRDPKVVEYIL  359 (631)
T ss_pred             H------------------------HHHHHHHHhcCCccHHHHHHHHHCCCcccc--CCcchHHHHHHHcCCHHHHHHHH
Confidence            0                        0012222222  478999999999998752  23566788999999999999999


Q ss_pred             HcCCCcccccCCC-CCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHH
Q psy903          428 AMHANVEDRGIKG-ECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLA  506 (739)
Q Consensus       428 ~~~~~~~~~~~~~-~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a  506 (739)
                      ++|++++..+..+ +.||||.                                                          |
T Consensus       360 s~GADIN~kD~~g~~~TpLh~----------------------------------------------------------A  381 (631)
T PHA02792        360 KNGNVVVEDDDNIINIMPLFP----------------------------------------------------------T  381 (631)
T ss_pred             HcCCchhhhcCCCCChhHHHH----------------------------------------------------------H
Confidence            9999998776554 2455554                                                          3


Q ss_pred             HhcCC---HHHHHHHHHcCCCCCC---CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHH---cC----
Q psy903          507 CCGGF---LDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACE---NG----  573 (739)
Q Consensus       507 ~~~~~---~~~v~~Ll~~~~~~~~---~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~---~~----  573 (739)
                      .....   .+++++++++|++++.   .|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+.   .+    
T Consensus       382 ~~n~~~~v~~IlklLIs~GADIN~kD~~G~TPLh~Aa~~~n~eivelLLs~GADIN~kD~~G~TpL~~A~~~~~~~~~~i  461 (631)
T PHA02792        382 LSIHESDVLSILKLCKPYIDDINKIDKHGRSILYYCIESHSVSLVEWLIDNGADINITTKYGSTCIGICVILAHACIPEI  461 (631)
T ss_pred             HHhccHhHHHHHHHHHhcCCccccccccCcchHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHHHhcccHHH
Confidence            33333   3578999999988854   58999999999999999999999999999999999999999986   22    


Q ss_pred             ---cHHHHHHHHhCCCCCC
Q psy903          574 ---HTDVADLLLSYGANLD  589 (739)
Q Consensus       574 ---~~~iv~~Ll~~~~~~~  589 (739)
                         ..++++.|++++++..
T Consensus       462 ~~~~~~il~lLLs~~p~i~  480 (631)
T PHA02792        462 AELYIKILEIILSKLPTIE  480 (631)
T ss_pred             HHHHHHHHHHHHhcCCChh
Confidence               2567888999887765

>PHA02878 ankyrin repeat protein; Provisional

Probab=100.00  E-value=2.9e-37  Score=318.83  Aligned_cols=293  Identities=23%  Similarity=0.294  Sum_probs=243.0

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      |||.||..|+.++|++|++.|+++|.+|..|+||||+||..|+.+++++|++.+++...  .. +.+|++.|+..+    
T Consensus        40 PLh~A~~~g~~e~vk~Ll~~gadvn~~d~~g~TpLh~A~~~g~~~~v~~Ll~~~~~~~~--~~-~~~~l~~a~~~~----  112 (477)
T PHA02878         40 PLHQAVEARNLDVVKSLLTRGHNVNQPDHRDLTPLHIICKEPNKLGMKEMIRSINKCSV--FY-TLVAIKDAFNNR----  112 (477)
T ss_pred             hHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCccHhHHHHHHHHHhcccc--cc-chhhHHHHHHcC----
Confidence            79999999999999999999999999999999999999999999999999999876654  23 349999999998    


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHc--CCHHHHHHHHhcCCCCCcCCCC-CC
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSD--GDVKTVKKLLTEGRSVHETTDE-GE  157 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~--~~~~~~~~ll~~~~~~~~~~~~-g~  157 (739)
                              ..++++.+........               .......+......  .+.+++++|++.|++++..+.. |.
T Consensus       113 --------~~ei~~~Ll~~~~~~~---------------~~~~~~~~~~~~~~~~~~~~iv~~Ll~~gadin~~~~~~g~  169 (477)
T PHA02878        113 --------NVEIFKIILTNRYKNI---------------QTIDLVYIDKKSKDDIIEAEITKLLLSYGADINMKDRHKGN  169 (477)
T ss_pred             --------CHHHHHHHHhCcccCc---------------ccCcHHHHhhccchhhHHHHHHHHHHHcCCCCCccCCCCCC
Confidence                    6777766654321100               00011111111112  2346999999999999999998 99


Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhc-CcH
Q psy903          158 SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAG-GHE  236 (739)
Q Consensus       158 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~-~~~  236 (739)
                      ||||+|+..|+.+++++|++.|++++..+.. |.||||.|+..++.+++++|+++|++++.+|..|.||||+|+.. ++.
T Consensus       170 tpLh~A~~~~~~~iv~~Ll~~gad~n~~d~~-g~tpLh~A~~~~~~~iv~~Ll~~ga~in~~d~~g~TpLh~A~~~~~~~  248 (477)
T PHA02878        170 TALHYATENKDQRLTELLLSYGANVNIPDKT-NNSPLHHAVKHYNKPIVHILLENGASTDARDKCGNTPLHISVGYCKDY  248 (477)
T ss_pred             CHHHHHHhCCCHHHHHHHHHCCCCCCCcCCC-CCCHHHHHHHhCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhcCCH
Confidence            9999999999999999999999999876654 56999999999999999999999999999999999999999975 789


Q ss_pred             HHHHHHHHCCCCCCCCCC-CCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcC-CHHHHHHHHHc--
Q psy903          237 AVVRVLLECGANVEDHNE-NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKG-HLDMVRFLLSA--  312 (739)
Q Consensus       237 ~~v~~Ll~~~~~~~~~~~-~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~-~~~~v~~Ll~~--  312 (739)
                      +++++|+++|++++.++. .|.||||.|  .++.+++++|+++|++++.. +..|.|||+.|+..+ ..+++++|+..  
T Consensus       249 ~iv~~Ll~~gadvn~~~~~~g~TpLh~A--~~~~~~v~~Ll~~gadin~~-d~~g~TpL~~A~~~~~~~~~~~~li~~~~  325 (477)
T PHA02878        249 DILKLLLEHGVDVNAKSYILGLTALHSS--IKSERKLKLLLEYGADINSL-NSYKLTPLSSAVKQYLCINIGRILISNIC  325 (477)
T ss_pred             HHHHHHHHcCCCCCccCCCCCCCHHHHH--ccCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHHHcCccchHHHHHHHHH
Confidence            999999999999999876 799999999  57889999999999999885 455999999999754 56777777765  


Q ss_pred             ---CCCCCCCCCcCCcHH
Q psy903          313 ---GADQEHKTDEMHTAL  327 (739)
Q Consensus       313 ---~~~~~~~~~~~~~~l  327 (739)
                         +.+++..+..|...-
T Consensus       326 ~~~~~~~~~~~~~g~~~n  343 (477)
T PHA02878        326 LLKRIKPDIKNSEGFIDN  343 (477)
T ss_pred             HHHhccCcccCcHHHHHH
Confidence               345566665555443

>PHA02791 ankyrin-like protein; Provisional

Probab=100.00  E-value=4.6e-36  Score=278.25  Aligned_cols=211  Identities=19%  Similarity=0.188  Sum_probs=191.3

Q ss_pred             HcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHH
Q psy903          132 SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLIN  211 (739)
Q Consensus       132 ~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~  211 (739)
                      ..++.+++++|++.|+  +..|..|.||||+|+..|+.+++++|++.|++++..+   ++||||+|+..|+.+++++|++
T Consensus         8 ~~~~~~~~~~Lis~~a--~~~D~~G~TpLh~Aa~~g~~eiv~~Ll~~ga~~n~~d---~~TpLh~Aa~~g~~eiV~lLL~   82 (284)
T PHA02791          8 TWKSKQLKSFLSSKDA--FKADVHGHSALYYAIADNNVRLVCTLLNAGALKNLLE---NEFPLHQAATLEDTKIVKILLF   82 (284)
T ss_pred             ccCHHHHHHHHHhCCC--CCCCCCCCcHHHHHHHcCCHHHHHHHHHCcCCCcCCC---CCCHHHHHHHCCCHHHHHHHHH
Confidence            3678899999999887  4688999999999999999999999999999887653   4699999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCC-cHHHHHHhcCChHHHHHHHHcCCCCcccCcCcc
Q psy903          212 HGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGH-TPLMEAASAGHVGVAKILLEYGAGINTHSNEFK  290 (739)
Q Consensus       212 ~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~  290 (739)
                      +|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|. ||||+|+..|+.+++++|+++++...  ....|
T Consensus        83 ~Gadvn~~d~~G~TpLh~Aa~~g~~eivk~Ll~~gadin~~~~~g~~TpL~~Aa~~g~~eivk~LL~~~~~~~--d~~~g  160 (284)
T PHA02791         83 SGMDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF--DLAIL  160 (284)
T ss_pred             CCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCcHHHHHHHHcCCHHHHHHHHhcCCccc--ccccC
Confidence            9999999999999999999999999999999999999999988884 89999999999999999999876532  11247


Q ss_pred             CCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcH-HHHHHhCCchHHHHHHHHcCCCc
Q psy903          291 ESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTA-LMEASMDGHVEVAKLLLDSGAQS  349 (739)
Q Consensus       291 ~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~-l~~a~~~~~~~~~~~L~~~~~~~  349 (739)
                      .||||+|+..|+.+++++|+++|++++.++..|.+| ||+|+..|+.+++++|+++|+++
T Consensus       161 ~TpLh~Aa~~g~~eiv~lLL~~gAd~n~~d~~g~t~~L~~Aa~~~~~e~v~lLl~~Ga~i  220 (284)
T PHA02791        161 LSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDLEMLQALFKYDINI  220 (284)
T ss_pred             ccHHHHHHHcCCHHHHHHHHHCCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHCCCCC
Confidence            899999999999999999999999999999988876 99999999999988888877764

>KOG4412|consensus

Probab=100.00  E-value=1.1e-37  Score=246.49  Aligned_cols=202  Identities=35%  Similarity=0.501  Sum_probs=164.1

Q ss_pred             hhhhhhcCCHHHHHHHHHcCC-CCcccCC-CCCcHHHHHHhcCcHHHHHHHH-HccccccccCCCCCcchhHHHhhcccc
Q psy903            2 LVQACSDGDVKTVKKLLTEGR-SVHETTD-EGESLLSLACSAGYYELAQVLL-AMHANVEDRGIKGECTPLMEAASSGFG   78 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~~g~-~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll-~~ga~~~~~~~~~~~t~l~~a~~~~~~   78 (739)
                      .+.++.......|+.++++-. .++.++. +||||||+||..|+.+|+.+|+ +-+..++..|+.| |||||+|+..|  
T Consensus         7 ~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddkDdaG-WtPlhia~s~g--   83 (226)
T KOG4412|consen    7 GKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDKDDAG-WTPLHIAASNG--   83 (226)
T ss_pred             HHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCccccC-CchhhhhhhcC--
Confidence            455667777778888887654 5677765 8999999999999999999998 5677787776555 48888777665  


Q ss_pred             ccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCC
Q psy903           79 KLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGE  157 (739)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~  157 (739)
                                                                              +.++|+.|+.+ |+|+|..+..|.
T Consensus        84 --------------------------------------------------------~~evVk~Ll~r~~advna~tn~G~  107 (226)
T KOG4412|consen   84 --------------------------------------------------------NDEVVKELLNRSGADVNATTNGGQ  107 (226)
T ss_pred             --------------------------------------------------------cHHHHHHHhcCCCCCcceecCCCc
Confidence                                                                    67888888887 888888888888


Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHH
Q psy903          158 SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA  237 (739)
Q Consensus       158 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~  237 (739)
                      |+||+|+.+|+++++++|+++|+.++.++..+ .||||-|+..|+++++++|+..|+.+|.+|..|+||||.|...|+.+
T Consensus       108 T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~-qtplHRAAavGklkvie~Li~~~a~~n~qDk~G~TpL~~al~e~~~d  186 (226)
T KOG4412|consen  108 TCLHYAAGKGRLEIAQLLLEKGALIRIKDKQG-QTPLHRAAAVGKLKVIEYLISQGAPLNTQDKYGFTPLHHALAEGHPD  186 (226)
T ss_pred             ceehhhhcCChhhHHHHHHhcCCCCccccccc-CchhHHHHhccchhhHHHHHhcCCCCCcccccCccHHHHHHhccCch
Confidence            88888888888888888888888887777555 48888888888888888888888888888888888888887778888


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903          238 VVRVLLECGANVEDHNENGHTPLMEAA  264 (739)
Q Consensus       238 ~v~~Ll~~~~~~~~~~~~~~t~L~~A~  264 (739)
                      +..+|++.|++.+..|+.| ||+..|+
T Consensus       187 ~a~lLV~~gAd~~~edke~-t~~~~a~  212 (226)
T KOG4412|consen  187 VAVLLVRAGADTDREDKEG-TALRIAC  212 (226)
T ss_pred             HHHHHHHhccceeeccccC-chHHHHH
Confidence            8888888888888888877 8876664

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=4.8e-36  Score=305.40  Aligned_cols=222  Identities=27%  Similarity=0.354  Sum_probs=111.8

Q ss_pred             hhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccc
Q psy903            2 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLA   81 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~   81 (739)
                      |+.|+..|++++|++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..+. ||             
T Consensus         6 L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~-t~-------------   71 (413)
T PHA02875          6 LCDAILFGELDIARRLLDIGINPNFEIYDGISPIKLAMKFRDSEAIKLLMKHGAIPDVKYPDIE-SE-------------   71 (413)
T ss_pred             HHHHHHhCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCccccCCCcc-cH-------------
Confidence            5566666666666666666666665555566666666666666666666666655543322221 22             


Q ss_pred             cCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCC-cCCCCCCcHH
Q psy903           82 TGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVH-ETTDEGESLL  160 (739)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~-~~~~~g~t~L  160 (739)
                                                                   ||.|+..|+.++++.|++.|.+.+ ..+..|.|||
T Consensus        72 ---------------------------------------------L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~tpL  106 (413)
T PHA02875         72 ---------------------------------------------LHDAVEEGDVKAVEELLDLGKFADDVFYKDGMTPL  106 (413)
T ss_pred             ---------------------------------------------HHHHHHCCCHHHHHHHHHcCCcccccccCCCCCHH
Confidence                                                         222333334555555555554332 2233445555


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHH
Q psy903          161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR  240 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~  240 (739)
                      |+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++++
T Consensus       107 ~~A~~~~~~~iv~~Ll~~gad~~~~~~~-g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~eiv~  185 (413)
T PHA02875        107 HLATILKKLDIMKLLIARGADPDIPNTD-KFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIAICK  185 (413)
T ss_pred             HHHHHhCCHHHHHHHHhCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHH
Confidence            5555555555555555555554443322 235555555555555555555555555555555555555555555555555


Q ss_pred             HHHHCCCCCCCCCCCCC-cHHHHHHhcCChHHHHHHHHcCCCCc
Q psy903          241 VLLECGANVEDHNENGH-TPLMEAASAGHVGVAKILLEYGAGIN  283 (739)
Q Consensus       241 ~Ll~~~~~~~~~~~~~~-t~L~~A~~~~~~~ii~~Ll~~~~~~~  283 (739)
                      +|+++|++++..+..|. ||+++|+..|+.+++++|+++|++++
T Consensus       186 ~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n  229 (413)
T PHA02875        186 MLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCN  229 (413)
T ss_pred             HHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcc
Confidence            55555555544444432 34444555555555555555444443

>PHA02875 ankyrin repeat protein; Provisional

Probab=100.00  E-value=6.9e-36  Score=304.21  Aligned_cols=255  Identities=26%  Similarity=0.275  Sum_probs=231.6

Q ss_pred             CCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHH
Q psy903           31 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAA  110 (739)
Q Consensus        31 g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  110 (739)
                      .+++||.|+..|+.+++++|+++|++++..+..|. ||||+|+..|                                  
T Consensus         2 ~~~~L~~A~~~g~~~iv~~Ll~~g~~~n~~~~~g~-tpL~~A~~~~----------------------------------   46 (413)
T PHA02875          2 DQVALCDAILFGELDIARRLLDIGINPNFEIYDGI-SPIKLAMKFR----------------------------------   46 (413)
T ss_pred             CchHHHHHHHhCCHHHHHHHHHCCCCCCccCCCCC-CHHHHHHHcC----------------------------------
Confidence            47899999999999999999999999998876665 9999999765                                  


Q ss_pred             HHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCC
Q psy903          111 LTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGE  190 (739)
Q Consensus       111 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~  190 (739)
                                              +.+++++|++.|++++..+..+.||||.|+..|+.+++++|++.|+.........|
T Consensus        47 ------------------------~~~~v~~Ll~~ga~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g  102 (413)
T PHA02875         47 ------------------------DSEAIKLLMKHGAIPDVKYPDIESELHDAVEEGDVKAVEELLDLGKFADDVFYKDG  102 (413)
T ss_pred             ------------------------CHHHHHHHHhCCCCccccCCCcccHHHHHHHCCCHHHHHHHHHcCCcccccccCCC
Confidence                                    68999999999999999989999999999999999999999999988776666667


Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChH
Q psy903          191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVG  270 (739)
Q Consensus       191 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~  270 (739)
                      .||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+
T Consensus       103 ~tpL~~A~~~~~~~iv~~Ll~~gad~~~~~~~g~tpLh~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~TpL~~A~~~g~~e  182 (413)
T PHA02875        103 MTPLHLATILKKLDIMKLLIARGADPDIPNTDKFSPLHLAVMMGDIKGIELLIDHKACLDIEDCCGCTPLIIAMAKGDIA  182 (413)
T ss_pred             CCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence            89999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCC---CCcCCcHHHHHHh---CCchHHHHHHHH
Q psy903          271 VAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHK---TDEMHTALMEASM---DGHVEVAKLLLD  344 (739)
Q Consensus       271 ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~---~~~~~~~l~~a~~---~~~~~~~~~L~~  344 (739)
                      ++++|+++|++++......+.+++++|+..++.+++++|+++|++++..   +..+.|+++....   ....+.++.++.
T Consensus       183 iv~~Ll~~ga~~n~~~~~~~~t~l~~A~~~~~~~iv~~Ll~~gad~n~~~~~~~~~~t~l~~~~~~~~~~~~~~~~~li~  262 (413)
T PHA02875        183 ICKMLLDSGANIDYFGKNGCVAALCYAIENNKIDIVRLFIKRGADCNIMFMIEGEECTILDMICNMCTNLESEAIDALIA  262 (413)
T ss_pred             HHHHHHhCCCCCCcCCCCCCchHHHHHHHcCCHHHHHHHHHCCcCcchHhhcCCCchHHHHHHHhhcCCcccHHHHHHHH
Confidence            9999999999999877665678999999999999999999999998865   5667899987653   334566666653

>PHA02989 ankyrin repeat protein; Provisional

Probab=100.00  E-value=3.1e-35  Score=304.34  Aligned_cols=260  Identities=22%  Similarity=0.314  Sum_probs=219.5

Q ss_pred             HcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHc--CcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC------cH
Q psy903          132 SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA--GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG------FI  203 (739)
Q Consensus       132 ~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~--~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~------~~  203 (739)
                      ...+.+++++|++.|+++|.. ..|.||||.++..  ++.++|++|+++|++++..+  .+.||||.|+.++      ..
T Consensus        12 ~~~~~~~v~~LL~~GadvN~~-~~g~t~l~~~~~~~~~~~~iv~~Ll~~GAdvn~~~--~~~tpL~~a~~~~~~~~~~~~   88 (494)
T PHA02989         12 DTVDKNALEFLLRTGFDVNEE-YRGNSILLLYLKRKDVKIKIVKLLIDNGADVNYKG--YIETPLCAVLRNREITSNKIK   88 (494)
T ss_pred             CcCcHHHHHHHHHcCCCcccc-cCCCCHHHHHHhcCCCChHHHHHHHHcCCCccCCC--CCCCcHHHHHhccCcchhhHH
Confidence            357899999999999999998 6789998876654  37899999999999999765  2369999998754      57


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHhc---CcHHHHHHHHHCCCCC-CCCCCCCCcHHHHHHhc--CChHHHHHHHH
Q psy903          204 EIVRLLINHGADVNGQSSSGNTPLMYACAG---GHEAVVRVLLECGANV-EDHNENGHTPLMEAASA--GHVGVAKILLE  277 (739)
Q Consensus       204 ~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~---~~~~~v~~Ll~~~~~~-~~~~~~~~t~L~~A~~~--~~~~ii~~Ll~  277 (739)
                      +++++|+++|+++|.++..|.||||.|+..   ++.+++++|+++|+++ +..|..|.||||+|+..  ++.+++++|++
T Consensus        89 ~iv~~Ll~~Gadin~~d~~g~tpL~~a~~~~~~~~~eiv~~Ll~~Gadin~~~d~~g~tpLh~a~~~~~~~~~iv~~Ll~  168 (494)
T PHA02989         89 KIVKLLLKFGADINLKTFNGVSPIVCFIYNSNINNCDMLRFLLSKGINVNDVKNSRGYNLLHMYLESFSVKKDVIKILLS  168 (494)
T ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHHhcccCcHHHHHHHHHCCCCcccccCCCCCCHHHHHHHhccCCHHHHHHHHH
Confidence            899999999999999999999999988765   6799999999999999 88999999999998764  58999999999


Q ss_pred             cCCCCcccCcCccCCHHHHHHHcC----CHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhh
Q psy903          278 YGAGINTHSNEFKESALTLACYKG----HLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAY  353 (739)
Q Consensus       278 ~~~~~~~~~~~~~~~~l~~A~~~~----~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~  353 (739)
                      +|++++...+..|.|||+.|+..+    +.+++++|+++|++++..+..+.++++.+...+.                  
T Consensus       169 ~Gadi~~~~~~~g~tpL~~a~~~~~~~~~~~iv~~Ll~~Ga~vn~~~~~~~t~l~~~~~~~~------------------  230 (494)
T PHA02989        169 FGVNLFEKTSLYGLTPMNIYLRNDIDVISIKVIKYLIKKGVNIETNNNGSESVLESFLDNNK------------------  230 (494)
T ss_pred             cCCCccccccccCCChHHHHHhcccccccHHHHHHHHhCCCCccccCCccccHHHHHHHhch------------------
Confidence            999998755677999999998764    8999999999999999999888999987764321                  


Q ss_pred             cccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCc
Q psy903          354 ARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV  433 (739)
Q Consensus       354 ~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~  433 (739)
                                                 +...+..+++++++. |++++.++..|.||||+|+..++.+++++|++.|+++
T Consensus       231 ---------------------------~~~~~~~~il~~l~~-~advn~~d~~G~TpL~~Aa~~~~~~~v~~LL~~Gadi  282 (494)
T PHA02989        231 ---------------------------ILSKKEFKVLNFILK-YIKINKKDKKGFNPLLISAKVDNYEAFNYLLKLGDDI  282 (494)
T ss_pred             ---------------------------hhcccchHHHHHHHh-CCCCCCCCCCCCCHHHHHHHhcCHHHHHHHHHcCCCc
Confidence                                       111234456665544 6888889999999999999999999999999999888


Q ss_pred             ccccCCC
Q psy903          434 EDRGIKG  440 (739)
Q Consensus       434 ~~~~~~~  440 (739)
                      +..+..|
T Consensus       283 n~~d~~G  289 (494)
T PHA02989        283 YNVSKDG  289 (494)
T ss_pred             cccCCCC
Confidence            7765443

>KOG4412|consensus

Probab=100.00  E-value=1.7e-36  Score=239.82  Aligned_cols=205  Identities=34%  Similarity=0.481  Sum_probs=186.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCC-CCCcCCC-CCCcHHHHHHHcCcHHHHHHHH-hCCCCccccCCCCCCcHHHHHHHcC
Q psy903          125 RSLVQACSDGDVKTVKKLLTEGR-SVHETTD-EGESLLSLACSAGYYELAQVLL-AMHANVEDRGIKGECTPLMEAASSG  201 (739)
Q Consensus       125 ~~l~~A~~~~~~~~~~~ll~~~~-~~~~~~~-~g~t~L~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~t~L~~A~~~~  201 (739)
                      ++.+.++......-++.+++... .++.+++ +|+|||||||..|+.+++.+|+ +.+..++.+ +..||||||+|+..|
T Consensus         5 ~~~~~~~~~~~~~kveel~~s~~kSL~~r~dqD~Rt~LHwa~S~g~~eiv~fLlsq~nv~~ddk-DdaGWtPlhia~s~g   83 (226)
T KOG4412|consen    5 SLGKAICENCEEFKVEELIQSDPKSLNARDDQDGRTPLHWACSFGHVEIVYFLLSQPNVKPDDK-DDAGWTPLHIAASNG   83 (226)
T ss_pred             chHHHHHhhchHHHHHHHHhcChhhhhccccccCCceeeeeeecCchhHHHHHHhcCCCCCCCc-cccCCchhhhhhhcC
Confidence            44566677777788888888877 6788877 9999999999999999999999 556667777 566799999999999


Q ss_pred             cHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903          202 FIEIVRLLINH-GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA  280 (739)
Q Consensus       202 ~~~~~~~Ll~~-g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~  280 (739)
                      +-++|+.|+.+ |+++|..+..|.|+||||+..|..+|+++|+++|+.++.+|..|.||||.|+.-|.++++++|+.+|+
T Consensus        84 ~~evVk~Ll~r~~advna~tn~G~T~LHyAagK~r~eIaqlLle~ga~i~~kD~~~qtplHRAAavGklkvie~Li~~~a  163 (226)
T KOG4412|consen   84 NDEVVKELLNRSGADVNATTNGGQTCLHYAAGKGRLEIAQLLLEKGALIRIKDKQGQTPLHRAAAVGKLKVIEYLISQGA  163 (226)
T ss_pred             cHHHHHHHhcCCCCCcceecCCCcceehhhhcCChhhHHHHHHhcCCCCcccccccCchhHHHHhccchhhHHHHHhcCC
Confidence            99999999998 99999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHh
Q psy903          281 GINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASM  332 (739)
Q Consensus       281 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~  332 (739)
                      .++. .+.+|.||||.|.-.|+.+....|++.|++.+..|+.| |++..+.-
T Consensus       164 ~~n~-qDk~G~TpL~~al~e~~~d~a~lLV~~gAd~~~edke~-t~~~~a~~  213 (226)
T KOG4412|consen  164 PLNT-QDKYGFTPLHHALAEGHPDVAVLLVRAGADTDREDKEG-TALRIACN  213 (226)
T ss_pred             CCCc-ccccCccHHHHHHhccCchHHHHHHHhccceeeccccC-chHHHHHH
Confidence            8887 46679999999998999999999999999999999988 88776653

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=1.1e-35  Score=307.23  Aligned_cols=283  Identities=18%  Similarity=0.210  Sum_probs=228.7

Q ss_pred             CHHHHHHHHHcCCCCcccCCCCCcHHHHHHhc--CcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCC
Q psy903           10 DVKTVKKLLTEGRSVHETTDEGESLLSLACSA--GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKL   87 (739)
Q Consensus        10 ~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~--~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~   87 (739)
                      +++.|+.|+..+ +++.. ..|.|+++.+...  ++.++|++|+++|++++..+..|. ||||.|+.+.           
T Consensus        17 ~~~~v~~ll~~~-~~~~~-~~~~~~~~~yl~~~~~~~~iv~~Ll~~Gadvn~~d~~g~-TpL~~~~~n~-----------   82 (489)
T PHA02798         17 KLSTVKLLIKSC-NPNEI-VNEYSIFQKYLQRDSPSTDIVKLFINLGANVNGLDNEYS-TPLCTILSNI-----------   82 (489)
T ss_pred             cHHHHHHHHhcC-Chhhh-cccchHHHHHHhCCCCCHHHHHHHHHCCCCCCCCCCCCC-ChHHHHHHhH-----------
Confidence            578999999764 44433 4577887755443  488999999999999999887776 9999988742           


Q ss_pred             CCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcC
Q psy903           88 ADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG  167 (739)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~  167 (739)
                                                                +...+..+++++|++.|++++.++..|.||||+|+..+
T Consensus        83 ------------------------------------------~~~~~~~~iv~~Ll~~GadiN~~d~~G~TpLh~a~~~~  120 (489)
T PHA02798         83 ------------------------------------------KDYKHMLDIVKILIENGADINKKNSDGETPLYCLLSNG  120 (489)
T ss_pred             ------------------------------------------HhHHhHHHHHHHHHHCCCCCCCCCCCcCcHHHHHHHcC
Confidence                                                      01123468899999999999999999999999998875


Q ss_pred             ---cHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc---HHHHHHHHHCCCCCCCCC-CCCCcHHHHHHhc----CcH
Q psy903          168 ---YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF---IEIVRLLINHGADVNGQS-SSGNTPLMYACAG----GHE  236 (739)
Q Consensus       168 ---~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~---~~~~~~Ll~~g~~~~~~~-~~~~t~L~~A~~~----~~~  236 (739)
                         +.+++++|+++|++++..+.. |.||||+|+..++   .+++++|+++|++++.++ ..|.||||.++..    ++.
T Consensus       121 ~~~~~~iv~~Ll~~Gadvn~~d~~-g~tpL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~  199 (489)
T PHA02798        121 YINNLEILLFMIENGADTTLLDKD-GFTMLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDA  199 (489)
T ss_pred             CcChHHHHHHHHHcCCCccccCCC-CCcHHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCH
Confidence               688999999999998877655 4699999999887   899999999999988774 5688999988764    478


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHH-------HHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHH
Q psy903          237 AVVRVLLECGANVEDHNENGHTPLM-------EAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL  309 (739)
Q Consensus       237 ~~v~~Ll~~~~~~~~~~~~~~t~L~-------~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L  309 (739)
                      +++++|+++|++++..+..+.++++       .+...++.+++++|+. +.+++.. +..|.||||+|+..++.+++++|
T Consensus       200 ~ivk~Li~~Ga~i~~~~~~~~~~~~~~l~~l~~~~~~~~~~i~~~l~~-~~dvN~~-d~~G~TPL~~A~~~~~~~~v~~L  277 (489)
T PHA02798        200 DILKLFVDNGFIINKENKSHKKKFMEYLNSLLYDNKRFKKNILDFIFS-YIDINQV-DELGFNPLYYSVSHNNRKIFEYL  277 (489)
T ss_pred             HHHHHHHHCCCCcccCCccccchHHHHHHHHHhhcccchHHHHHHHHh-cCCCCCc-CcCCccHHHHHHHcCcHHHHHHH
Confidence            9999999999999888888888876       2344567788888766 4777764 44588999999999999999999


Q ss_pred             HHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchh
Q psy903          310 LSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVS  351 (739)
Q Consensus       310 l~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~  351 (739)
                      ++.|++++..+..|.|||+.|+..++.++++.|++.+++...
T Consensus       278 L~~GAdin~~d~~G~TpL~~A~~~~~~~iv~~lL~~~~~~~~  319 (489)
T PHA02798        278 LQLGGDINIITELGNTCLFTAFENESKFIFNSILNKKPNKNT  319 (489)
T ss_pred             HHcCCcccccCCCCCcHHHHHHHcCcHHHHHHHHccCCCHHH
Confidence            999999999999999999999999999999999998887653

>KOG0508|consensus

Probab=100.00  E-value=3.7e-35  Score=268.38  Aligned_cols=215  Identities=35%  Similarity=0.530  Sum_probs=169.1

Q ss_pred             HHHHHcCCHHHHHHHHhcCC-----CCCcCCCCCCcHHHHHHHcCcHHHHHHHHh-CCCCccccC-------CCCCCcHH
Q psy903          128 VQACSDGDVKTVKKLLTEGR-----SVHETTDEGESLLSLACSAGYYELAQVLLA-MHANVEDRG-------IKGECTPL  194 (739)
Q Consensus       128 ~~A~~~~~~~~~~~ll~~~~-----~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~-------~~~~~t~L  194 (739)
                      ..|++.|++..+..|+-+.-     +.--...+|.|||-+|+++|+.++|++|++ .++++....       ...|-+||
T Consensus         9 ~naa~~g~l~~l~~ll~~~s~~ei~~l~~~~~~g~tPL~iaaRnGH~~vVeyLle~~~a~~e~~GsV~FDge~IegappL   88 (615)
T KOG0508|consen    9 INAARDGKLQLLAKLLINSSNEEIISLIGEVQNGGTPLLIAARNGHADVVEYLLEHCRASPEQGGSVRFDGETIEGAPPL   88 (615)
T ss_pred             HHHhhhhhHHHHHHHHhCCchHHHHHHhccccCCCCceeeehhcCcHHHHHHHHHHhcCCccCCceEEeCCcccCCCchh
Confidence            36777777777777775422     111234567788888888888888888888 344443221       23345888


Q ss_pred             HHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHH
Q psy903          195 MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKI  274 (739)
Q Consensus       195 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~  274 (739)
                      ..|+..|++++|+.|+++|+++|.......|||-.||..|+++++++|+++|+|++..|+.|.|.|++|+..|+.+|+++
T Consensus        89 WaAsaAGHl~vVk~L~~~ga~VN~tT~TNStPLraACfDG~leivKyLvE~gad~~IanrhGhTcLmIa~ykGh~~I~qy  168 (615)
T KOG0508|consen   89 WAASAAGHLEVVKLLLRRGASVNDTTRTNSTPLRAACFDGHLEIVKYLVEHGADPEIANRHGHTCLMIACYKGHVDIAQY  168 (615)
T ss_pred             hHHhccCcHHHHHHHHHhcCccccccccCCccHHHHHhcchhHHHHHHHHcCCCCcccccCCCeeEEeeeccCchHHHHH
Confidence            88888888888888888888888887777788888888888888888888888888888888888888888888888888


Q ss_pred             HHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHH
Q psy903          275 LLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD  344 (739)
Q Consensus       275 Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~  344 (739)
                      |++.|++++..+ ..|.|+||.|++.|+.+++++|+..|+.+.. +..|.|||..|...|+.+++++|++
T Consensus       169 Lle~gADvn~ks-~kGNTALH~caEsG~vdivq~Ll~~ga~i~~-d~~GmtPL~~Aa~tG~~~iVe~L~~  236 (615)
T KOG0508|consen  169 LLEQGADVNAKS-YKGNTALHDCAESGSVDIVQLLLKHGAKIDV-DGHGMTPLLLAAVTGHTDIVERLLQ  236 (615)
T ss_pred             HHHhCCCcchhc-ccCchHHHhhhhcccHHHHHHHHhCCceeee-cCCCCchHHHHhhhcchHHHHHHhc
Confidence            888888888754 4488888888888888888888888887764 4458888888888888888888886

>PHA02798 ankyrin-like protein; Provisional

Probab=100.00  E-value=2.6e-34  Score=297.07  Aligned_cols=258  Identities=17%  Similarity=0.248  Sum_probs=232.5

Q ss_pred             hhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhc-----CcHHHHHHHHHccccccccCCCCCcchhHHHhhcccc
Q psy903            4 QACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA-----GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFG   78 (739)
Q Consensus         4 ~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~-----~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~   78 (739)
                      .+...++.++|+.|+++|+++|..|..|.||||.|+.+     ++.+++++|+++||+++..+..|. ||||+|+..+  
T Consensus        44 l~~~~~~~~iv~~Ll~~Gadvn~~d~~g~TpL~~~~~n~~~~~~~~~iv~~Ll~~GadiN~~d~~G~-TpLh~a~~~~--  120 (489)
T PHA02798         44 LQRDSPSTDIVKLFINLGANVNGLDNEYSTPLCTILSNIKDYKHMLDIVKILIENGADINKKNSDGE-TPLYCLLSNG--  120 (489)
T ss_pred             HhCCCCCHHHHHHHHHCCCCCCCCCCCCCChHHHHHHhHHhHHhHHHHHHHHHHCCCCCCCCCCCcC-cHHHHHHHcC--
Confidence            34556789999999999999999999999999999875     789999999999999999998776 9999988766  


Q ss_pred             ccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCc
Q psy903           79 KLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGES  158 (739)
Q Consensus        79 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t  158 (739)
                                                                           ..++.+++++|++.|++++..+..|.|
T Consensus       121 -----------------------------------------------------~~~~~~iv~~Ll~~Gadvn~~d~~g~t  147 (489)
T PHA02798        121 -----------------------------------------------------YINNLEILLFMIENGADTTLLDKDGFT  147 (489)
T ss_pred             -----------------------------------------------------CcChHHHHHHHHHcCCCccccCCCCCc
Confidence                                                                 237899999999999999999999999


Q ss_pred             HHHHHHHcCc---HHHHHHHHhCCCCccccCCCCCCcHHHHHHHc----CcHHHHHHHHHCCCCCCCCCCCCCcHHH---
Q psy903          159 LLSLACSAGY---YELAQVLLAMHANVEDRGIKGECTPLMEAASS----GFIEIVRLLINHGADVNGQSSSGNTPLM---  228 (739)
Q Consensus       159 ~L~~A~~~~~---~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~----~~~~~~~~Ll~~g~~~~~~~~~~~t~L~---  228 (739)
                      |||+|+..++   .+++++|++.|++++..+...+.||||.++..    ++.+++++|+++|++++..+..+.++++   
T Consensus       148 pL~~a~~~~~~~~~~vv~~Ll~~gadin~~~~~~~~t~Lh~~~~~~~~~~~~~ivk~Li~~Ga~i~~~~~~~~~~~~~~l  227 (489)
T PHA02798        148 MLQVYLQSNHHIDIEIIKLLLEKGVDINTHNNKEKYDTLHCYFKYNIDRIDADILKLFVDNGFIINKENKSHKKKFMEYL  227 (489)
T ss_pred             HHHHHHHcCCcchHHHHHHHHHhCCCcccccCcCCCcHHHHHHHhccccCCHHHHHHHHHCCCCcccCCccccchHHHHH
Confidence            9999999988   99999999999999988777788999998764    4799999999999999999999999877   


Q ss_pred             ----HHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHH
Q psy903          229 ----YACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD  304 (739)
Q Consensus       229 ----~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~  304 (739)
                          ++...++.+++++|+. +++++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.|||+.|+..++.+
T Consensus       228 ~~l~~~~~~~~~~i~~~l~~-~~dvN~~d~~G~TPL~~A~~~~~~~~v~~LL~~GAdin~~-d~~G~TpL~~A~~~~~~~  305 (489)
T PHA02798        228 NSLLYDNKRFKKNILDFIFS-YIDINQVDELGFNPLYYSVSHNNRKIFEYLLQLGGDINII-TELGNTCLFTAFENESKF  305 (489)
T ss_pred             HHHHhhcccchHHHHHHHHh-cCCCCCcCcCCccHHHHHHHcCcHHHHHHHHHcCCccccc-CCCCCcHHHHHHHcCcHH
Confidence                2445677889988776 5999999999999999999999999999999999999875 456999999999999999


Q ss_pred             HHHHHHHcCCCCCCC
Q psy903          305 MVRFLLSAGADQEHK  319 (739)
Q Consensus       305 ~v~~Ll~~~~~~~~~  319 (739)
                      +++.|++.+++++..
T Consensus       306 iv~~lL~~~~~~~~i  320 (489)
T PHA02798        306 IFNSILNKKPNKNTI  320 (489)
T ss_pred             HHHHHHccCCCHHHH
Confidence            999999999887744

>KOG0509|consensus

Probab=100.00  E-value=7.2e-33  Score=265.90  Aligned_cols=206  Identities=35%  Similarity=0.475  Sum_probs=190.5

Q ss_pred             hhhhhhcCCHHHHHHHHHc-CCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            2 LVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~~-g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      ++.|+.+|+++.|+.|++. |.+++..|.+|-|+||+|+.+++++++++|+++||++|......+.||||+|+.+     
T Consensus        48 ~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~-----  122 (600)
T KOG0509|consen   48 IVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARN-----  122 (600)
T ss_pred             hhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHc-----
Confidence            5789999999999999997 9999999999999999999999999999999999999998866666777666655     


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL  160 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L  160 (739)
                                                                           |+..+++.|+++|+|++.+|.+|.++|
T Consensus       123 -----------------------------------------------------G~~~vv~lLlqhGAdpt~~D~~G~~~l  149 (600)
T KOG0509|consen  123 -----------------------------------------------------GHISVVDLLLQHGADPTLKDKQGLTPL  149 (600)
T ss_pred             -----------------------------------------------------CcHHHHHHHHHcCCCCceecCCCCcHH
Confidence                                                                 578999999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHhcCcHHHH
Q psy903          161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS-SSGNTPLMYACAGGHEAVV  239 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~L~~A~~~~~~~~v  239 (739)
                      |.|+..|+.-+|-||+.++++++..+.. |.||||+|+..|....++.|++.|+.+..+| ..|+||||+|+..|+.+++
T Consensus       150 Hla~~~~~~~~vayll~~~~d~d~~D~~-grTpLmwAaykg~~~~v~~LL~f~a~~~~~d~~~g~TpLHwa~~~gN~~~v  228 (600)
T KOG0509|consen  150 HLAAQFGHTALVAYLLSKGADIDLRDNN-GRTPLMWAAYKGFALFVRRLLKFGASLLLTDDNHGNTPLHWAVVGGNLTAV  228 (600)
T ss_pred             HHHHHhCchHHHHHHHHhcccCCCcCCC-CCCHHHHHHHhcccHHHHHHHHhcccccccccccCCchHHHHHhcCCcceE
Confidence            9999999999999999999888877755 5699999999999888999999999999988 9999999999999999999


Q ss_pred             HHHHHCCCCCCCCCCCCCcHHHHHHhc
Q psy903          240 RVLLECGANVEDHNENGHTPLMEAASA  266 (739)
Q Consensus       240 ~~Ll~~~~~~~~~~~~~~t~L~~A~~~  266 (739)
                      .+|++.|++.+..|.+|.||+..|...
T Consensus       229 ~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  229 KLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             ehhhhcCCcccccccCCCCHHHHHHHh
Confidence            988888899999999999999999776

>KOG0509|consensus

Probab=100.00  E-value=2e-32  Score=262.83  Aligned_cols=211  Identities=34%  Similarity=0.464  Sum_probs=203.1

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903          123 NERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG  201 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~  201 (739)
                      ....+..|++.|+++.++.|++. |.+++..|.+|.|+||||+.+++++++++|+++|++++......+.||||+|+++|
T Consensus        44 ~~~~~v~A~q~G~l~~v~~lve~~g~~v~~~D~~g~tlLHWAAiNNrl~v~r~li~~gadvn~~gG~l~stPLHWAar~G  123 (600)
T KOG0509|consen   44 SLDDIVKATQYGELETVKELVESEGESVNNPDREGVTLLHWAAINNRLDVARYLISHGADVNAIGGVLGSTPLHWAARNG  123 (600)
T ss_pred             hhhhhhhHhhcchHHHHHHHHhhcCcCCCCCCcCCccceeHHHHcCcHHHHHHHHHcCCCccccCCCCCCCcchHHHHcC
Confidence            35678999999999999999999 99999999999999999999999999999999999999999888889999999999


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903          202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG  281 (739)
Q Consensus       202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~  281 (739)
                      +..++++|+++|++++.+|..|.+|||.|+..++.-++-||+..|++++.+|.+|+|||++|+..|....+..|++.++.
T Consensus       124 ~~~vv~lLlqhGAdpt~~D~~G~~~lHla~~~~~~~~vayll~~~~d~d~~D~~grTpLmwAaykg~~~~v~~LL~f~a~  203 (600)
T KOG0509|consen  124 HISVVDLLLQHGADPTLKDKQGLTPLHLAAQFGHTALVAYLLSKGADIDLRDNNGRTPLMWAAYKGFALFVRRLLKFGAS  203 (600)
T ss_pred             cHHHHHHHHHcCCCCceecCCCCcHHHHHHHhCchHHHHHHHHhcccCCCcCCCCCCHHHHHHHhcccHHHHHHHHhccc
Confidence            99999999999999999999999999999999999999999999999999999999999999999998889999999999


Q ss_pred             CcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhC
Q psy903          282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMD  333 (739)
Q Consensus       282 ~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~  333 (739)
                      +...++..|.||||+|+..|+..+++.+++.|++.+..+.+|.||+..|...
T Consensus       204 ~~~~d~~~g~TpLHwa~~~gN~~~v~Ll~~g~~~~d~~~~~g~tp~~LA~~~  255 (600)
T KOG0509|consen  204 LLLTDDNHGNTPLHWAVVGGNLTAVKLLLEGGADLDKTNTNGKTPFDLAQER  255 (600)
T ss_pred             ccccccccCCchHHHHHhcCCcceEehhhhcCCcccccccCCCCHHHHHHHh
Confidence            9999889999999999999999999977788899999999999999999766

>KOG4369|consensus

Probab=100.00  E-value=1.3e-32  Score=275.94  Aligned_cols=284  Identities=32%  Similarity=0.440  Sum_probs=252.5

Q ss_pred             CCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhh
Q psy903          403 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQAS  482 (739)
Q Consensus       403 ~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  482 (739)
                      ....-.|+|..||..|+.|++++|+.+|+++.-++.++ .+||..++..++...                        +.
T Consensus       753 Te~n~~t~LT~acaggh~e~vellv~rganiehrdkkg-f~plImaatagh~tv------------------------V~  807 (2131)
T KOG4369|consen  753 TEPNIKTNLTSACAGGHREEVELLVVRGANIEHRDKKG-FVPLIMAATAGHITV------------------------VQ  807 (2131)
T ss_pred             cCccccccccccccCccHHHHHHHHHhccccccccccc-chhhhhhcccCchHH------------------------HH
Confidence            33456789999999999999999999999998888887 899999888887744                        34


Q ss_pred             hhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCCC---CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC
Q psy903          483 VILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKT  559 (739)
Q Consensus       483 ~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~---~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d  559 (739)
                      .++....+++...+..+.++|..||..|+.++|+.|+..|++-   +....|||.+|..-|.+++++.|+.+|.++|.+.
T Consensus       808 ~llk~ha~veaQsdrtkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrt  887 (2131)
T KOG4369|consen  808 DLLKAHADVEAQSDRTKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRT  887 (2131)
T ss_pred             HHHhhhhhhhhhcccccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhccccccccc
Confidence            4566667777778888999999999999999999999998865   5567899999999999999999999999988775


Q ss_pred             --CCCCcHHHHHHHcCcHHHHHHHHhCCCCCC------CCcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHH
Q psy903          560 --QTGDTALTYACENGHTDVADLLLSYGANLD------NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYAC  631 (739)
Q Consensus       560 --~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~------~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~  631 (739)
                        ..|-.||++|..+|+.+.++.|++.|.+++      .+|+|-.|+..|+.++|.+|+.+.+.+..+-+.|-|||+-++
T Consensus       888 gSklgisPLmlatmngh~~at~~ll~~gsdiNaqIeTNrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~A  967 (2131)
T KOG4369|consen  888 GSKLGISPLMLATMNGHQAATLSLLQPGSDINAQIETNRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMA  967 (2131)
T ss_pred             ccccCcchhhhhhhccccHHHHHHhcccchhccccccccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhh
Confidence              468899999999999999999999998875      689999999999999999999999999999999999999999


Q ss_pred             HcCCHHHHHHHHHcCCCCC-------CchHHHHHHhCCChhHHHHHhcCCCcccCCCCCCCCCCCchhhhccCCCccccc
Q psy903          632 ENGHTDVADLLLSYGANLD-------NSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHA  704 (739)
Q Consensus       632 ~~~~~~~v~~L~~~~~~~~-------~~~~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  704 (739)
                      ..|.+|+-.+|+..|+|.+       -.|+|-.++..||...|..|+..++..                         ..
T Consensus       968 sgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~kGh~kfv~~lln~~atv-------------------------~v 1022 (2131)
T KOG4369|consen  968 SGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANKGHTKFVPKLLNGDATV-------------------------RV 1022 (2131)
T ss_pred             cCCccccchhhhhcccccccCCCCCcCCccceeecCCCchhhhHHhhCCccce-------------------------ec
Confidence            9999999999999999853       337899999999999999999865554                         78


Q ss_pred             CCCCCchHHHHHHHcCcHHHHHHHHHcCCCCC
Q psy903          705 KTQTGDTALTYACENGHTDVADLLLSYGANLR  736 (739)
Q Consensus       705 ~~~~g~t~l~~A~~~~~~~i~~~L~~~ga~~~  736 (739)
                      +++.|+|+|..|+..|++..+..|++++||++
T Consensus      1023 ~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d 1054 (2131)
T KOG4369|consen 1023 PNKKGCTVLWLASAGGALSSCPILVSSVADAD 1054 (2131)
T ss_pred             ccCCCCcccchhccCCccccchHHhhcccChh
Confidence            89999999999999999999999999999986

>KOG4369|consensus

Probab=99.97  E-value=6.9e-31  Score=263.68  Aligned_cols=309  Identities=30%  Similarity=0.384  Sum_probs=233.1

Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcc
Q psy903          292 SALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSIS  371 (739)
Q Consensus       292 ~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  371 (739)
                      |+|..||..|+.|+++.|+.+|+++..+|+.|.+||.+|+..||..+|+.|+.+.+++....++                
T Consensus       759 t~LT~acaggh~e~vellv~rganiehrdkkgf~plImaatagh~tvV~~llk~ha~veaQsdr----------------  822 (2131)
T KOG4369|consen  759 TNLTSACAGGHREEVELLVVRGANIEHRDKKGFVPLIMAATAGHITVVQDLLKAHADVEAQSDR----------------  822 (2131)
T ss_pred             ccccccccCccHHHHHHHHHhcccccccccccchhhhhhcccCchHHHHHHHhhhhhhhhhccc----------------
Confidence            4555555555555555555555555555555555555555555555555555554443322221                


Q ss_pred             cccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHc
Q psy903          372 YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS  451 (739)
Q Consensus       372 ~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~  451 (739)
                       ...+++..||..|+.++++.|+..|++-..++-...|||.+|...|+.++++.|+..|..++.+..             
T Consensus       823 -tkdt~lSlacsggr~~vvelLl~~gankehrnvsDytPlsla~Sggy~~iI~~llS~GseInSrtg-------------  888 (2131)
T KOG4369|consen  823 -TKDTMLSLACSGGRTRVVELLLNAGANKEHRNVSDYTPLSLARSGGYTKIIHALLSSGSEINSRTG-------------  888 (2131)
T ss_pred             -ccCceEEEecCCCcchHHHHHHHhhccccccchhhcCchhhhcCcchHHHHHHHhhcccccccccc-------------
Confidence             122234555555555555555555555555555555555555555555555555555555444321             


Q ss_pred             CCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCCCCC----
Q psy903          452 GRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL----  527 (739)
Q Consensus       452 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~----  527 (739)
                                                                  ...+..||..|...|+...++.|++.|.+++.    
T Consensus       889 --------------------------------------------SklgisPLmlatmngh~~at~~ll~~gsdiNaqIeT  924 (2131)
T KOG4369|consen  889 --------------------------------------------SKLGISPLMLATMNGHQAATLSLLQPGSDINAQIET  924 (2131)
T ss_pred             --------------------------------------------cccCcchhhhhhhccccHHHHHHhcccchhcccccc
Confidence                                                        23467899999999999999999999988755    


Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC-------CCcHHHHHHHc
Q psy903          528 GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-------NSTMLIEAAKG  600 (739)
Q Consensus       528 ~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~-------~~~~l~~A~~~  600 (739)
                      +.+|+|-+|+..|+.+++.+||.+.+++..+-..|.|||+-++..|..|+=.+|+..|+|.+       ..|+|.+++..
T Consensus       925 NrnTaltla~fqgr~evv~lLLa~~anvehRaktgltplme~AsgGyvdvg~~li~~gad~nasPvp~T~dtalti~a~k 1004 (2131)
T KOG4369|consen  925 NRNTALTLALFQGRPEVVFLLLAAQANVEHRAKTGLTPLMEMASGGYVDVGNLLIAAGADTNASPVPNTWDTALTIPANK 1004 (2131)
T ss_pred             ccccceeeccccCcchHHHHHHHHhhhhhhhcccCCcccchhhcCCccccchhhhhcccccccCCCCCcCCccceeecCC
Confidence            56799999999999999999999999999999999999999999999999999999999986       46899999999


Q ss_pred             CCHHHHHHHhhCCCCCCcCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCC-----CchHHHHHHhCCChhHHHHHhcCC
Q psy903          601 GHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFP  674 (739)
Q Consensus       601 ~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~-----~~~~L~~A~~~g~~~~v~~L~~~~  674 (739)
                      ||...|..|+...+-+..+|++|.|+|-.|+..|++..+..|++++++.+     ..+++..|.++||.+||+|.....
T Consensus      1005 Gh~kfv~~lln~~atv~v~NkkG~T~Lwla~~Gg~lss~~il~~~~ad~d~qdnr~~S~~maafRKgh~~iVk~mv~~a 1083 (2131)
T KOG4369|consen 1005 GHTKFVPKLLNGDATVRVPNKKGCTVLWLASAGGALSSCPILVSSVADADQQDNRTNSRTMAAFRKGHFAIVKKMVPPA 1083 (2131)
T ss_pred             CchhhhHHhhCCccceecccCCCCcccchhccCCccccchHHhhcccChhhhhcccccccHHHHHhchhheeccccCch
Confidence            99999999999999999999999999999999999999999999999864     336899999999999999998753

>PHA02795 ankyrin-like protein; Provisional

Probab=99.97  E-value=8.3e-30  Score=244.52  Aligned_cols=235  Identities=18%  Similarity=0.119  Sum_probs=194.6

Q ss_pred             HHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHcccccc------ccCCCCCcchhHHHhhccccccccCCCC
Q psy903           13 TVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE------DRGIKGECTPLMEAASSGFGKLATGDGK   86 (739)
Q Consensus        13 ~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~------~~~~~~~~t~l~~a~~~~~~~~~~~~~~   86 (739)
                      +.++|+++|+++|..+.+|     +|+..+..|++++|+.+|++++      ..+... +|+||.++.++          
T Consensus        64 ~~~~~~~~~~~i~~~~~~~-----~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~-~~~L~~~~~n~----------  127 (437)
T PHA02795         64 LYDYFRIHRDNIDQYIVDR-----LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSV-QDLLLYYLSNA----------  127 (437)
T ss_pred             HHHHHHHcCcchhhhhhhh-----HHhhcchHHHHHHHHhcccccchhhhhhhccccc-cHHHHHHHHhc----------
Confidence            4578889999999988887     8999999999999999999987      333222 35555555433          


Q ss_pred             CCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHc
Q psy903           87 LADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA  166 (739)
Q Consensus        87 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~  166 (739)
                                                                    .|+.+++++|+++|++++..  ++.||||.|+..
T Consensus       128 ----------------------------------------------~n~~eiV~~LI~~GADIn~~--~~~t~lh~A~~~  159 (437)
T PHA02795        128 ----------------------------------------------YVEIDIVDFMVDHGAVIYKI--ECLNAYFRGICK  159 (437)
T ss_pred             ----------------------------------------------CCCHHHHHHHHHCCCCCCCC--CCCCHHHHHHHc
Confidence                                                          68899999999999999875  447999999999


Q ss_pred             CcHHHHHHHHhCCCCccccCC-----CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHH
Q psy903          167 GYYELAQVLLAMHANVEDRGI-----KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV  241 (739)
Q Consensus       167 ~~~~~v~~Ll~~~~~~~~~~~-----~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~  241 (739)
                      ++.+++++|+++|++......     ..+.+++|.|+..++.+++++|+++|+++|.+|..|.||||+|+..|+.+++++
T Consensus       160 ~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G~TpLh~Aa~~g~~eiVel  239 (437)
T PHA02795        160 KESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGGRTLLYRAIYAGYIDLVSW  239 (437)
T ss_pred             CcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCCCCHHHHHHHcCCHHHHHH
Confidence            999999999999985433321     235799999999999999999999999999999999999999999999999999


Q ss_pred             HHHCCCCCCCCCCCCCcHHHHHHhcCC--------hHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcC
Q psy903          242 LLECGANVEDHNENGHTPLMEAASAGH--------VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG  313 (739)
Q Consensus       242 Ll~~~~~~~~~~~~~~t~L~~A~~~~~--------~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~  313 (739)
                      |+++|++++.+|..|.||||+|+..|+        .+++++|+++|++++...    .+.+...  ..+.++++.++++.
T Consensus       240 LL~~GAdIN~~d~~G~TpLh~Aa~~g~~~~~~~~~~eIvelLL~~gadI~~~~----~~~~~~~--~~n~~~ik~lI~y~  313 (437)
T PHA02795        240 LLENGANVNAVMSNGYTCLDVAVDRGSVIARRETHLKILEILLREPLSIDCIK----LAILNNT--IENHDVIKLCIKYF  313 (437)
T ss_pred             HHHCCCCCCCcCCCCCCHHHHHHHcCCcccccccHHHHHHHHHhCCCCCCchh----HHhhhcc--cchHHHHHHHHHHH
Confidence            999999999999999999999999984        699999999998876532    1222211  12678888888776


Q ss_pred             CCCC
Q psy903          314 ADQE  317 (739)
Q Consensus       314 ~~~~  317 (739)
                      ..++
T Consensus       314 ~~ld  317 (437)
T PHA02795        314 MMVD  317 (437)
T ss_pred             Hhcc
Confidence            5443

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.96  E-value=3.1e-28  Score=218.93  Aligned_cols=178  Identities=17%  Similarity=0.127  Sum_probs=149.0

Q ss_pred             CCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHH
Q psy903           29 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAA  108 (739)
Q Consensus        29 ~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (739)
                      ..+.||||.|+..|+.++|+.|++.+   +..+..+. ||||+|+..+                                
T Consensus        19 ~~~~~pL~~A~~~~~~~~vk~Li~~~---n~~~~~g~-TpLh~a~~~~--------------------------------   62 (209)
T PHA02859         19 YRYCNPLFYYVEKDDIEGVKKWIKFV---NDCNDLYE-TPIFSCLEKD--------------------------------   62 (209)
T ss_pred             hccCcHHHHHHHhCcHHHHHHHHHhh---hccCccCC-CHHHHHHHcC--------------------------------
Confidence            45688999999999999999998763   34555554 9999998754                                


Q ss_pred             HHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCC-CCCCcHHHHHHHc---CcHHHHHHHHhCCCCccc
Q psy903          109 AALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETT-DEGESLLSLACSA---GYYELAQVLLAMHANVED  184 (739)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~-~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~  184 (739)
                                              .++.+++++|++.|++++..+ ..|.||||+|+..   ++.+++++|+++|++++.
T Consensus        63 ------------------------~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~~~~~~~eiv~~Ll~~gadin~  118 (209)
T PHA02859         63 ------------------------KVNVEILKFLIENGADVNFKTRDNNLSALHHYLSFNKNVEPEILKILIDSGSSITE  118 (209)
T ss_pred             ------------------------CCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHhCccccHHHHHHHHHCCCCCCC
Confidence                                    346889999999999999887 4789999988753   478999999999999987


Q ss_pred             cCCCCCCcHHHHHHH--cCcHHHHHHHHHCCCCCCCCCCCCCcHHHH-HHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHH
Q psy903          185 RGIKGECTPLMEAAS--SGFIEIVRLLINHGADVNGQSSSGNTPLMY-ACAGGHEAVVRVLLECGANVEDHNENGHTPLM  261 (739)
Q Consensus       185 ~~~~~~~t~L~~A~~--~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~-A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~  261 (739)
                      .+. .|.||||.|+.  .++.+++++|+++|++++.+|..|.||||. |+..++.+++++|+++|++++.+|..|.|||+
T Consensus       119 ~d~-~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~Ll~~Gadi~~~d~~g~tpl~  197 (209)
T PHA02859        119 EDE-DGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDFLTSLGIDINETNKSGYNCYD  197 (209)
T ss_pred             cCC-CCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHHHHHcCCCCCCCCCCCCCHHH
Confidence            765 45699999876  467999999999999999999999999995 56678899999999999999999999999999


Q ss_pred             HHHhcC
Q psy903          262 EAASAG  267 (739)
Q Consensus       262 ~A~~~~  267 (739)
                      +|..++
T Consensus       198 la~~~~  203 (209)
T PHA02859        198 LIKFRN  203 (209)
T ss_pred             HHhhhh
Confidence            998764

>PHA02859 ankyrin repeat protein; Provisional

Probab=99.95  E-value=1.1e-26  Score=208.84  Aligned_cols=174  Identities=18%  Similarity=0.214  Sum_probs=117.7

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcC--cHHHHHHHHhCCCCccccCCCCCCcHHHHHHHc
Q psy903          123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG--YYELAQVLLAMHANVEDRGIKGECTPLMEAASS  200 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~  200 (739)
                      ..+||+.|+..|+.+.++.|++.   ++..+..|.||||+|+..+  +.+++++|+++|++++..+...|+||||+|+..
T Consensus        21 ~~~pL~~A~~~~~~~~vk~Li~~---~n~~~~~g~TpLh~a~~~~~~~~eiv~~Ll~~gadvn~~~~~~g~TpLh~a~~~   97 (209)
T PHA02859         21 YCNPLFYYVEKDDIEGVKKWIKF---VNDCNDLYETPIFSCLEKDKVNVEILKFLIENGADVNFKTRDNNLSALHHYLSF   97 (209)
T ss_pred             cCcHHHHHHHhCcHHHHHHHHHh---hhccCccCCCHHHHHHHcCCCCHHHHHHHHHCCCCCCccCCCCCCCHHHHHHHh
Confidence            35677777777777777777764   4556667777777777643  677777777777777766544556777776543


Q ss_pred             ---CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHh--cCcHHHHHHHHHCCCCCCCCCCCCCcHHHH-HHhcCChHHHHH
Q psy903          201 ---GFIEIVRLLINHGADVNGQSSSGNTPLMYACA--GGHEAVVRVLLECGANVEDHNENGHTPLME-AASAGHVGVAKI  274 (739)
Q Consensus       201 ---~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~--~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~-A~~~~~~~ii~~  274 (739)
                         ++.+++++|+++|++++.+|..|.||||+|+.  .++.+++++|+++|++++.+|..|.||||. |+..++.+++++
T Consensus        98 ~~~~~~eiv~~Ll~~gadin~~d~~G~TpLh~a~~~~~~~~~iv~~Li~~gadin~~d~~g~t~Lh~~a~~~~~~~iv~~  177 (209)
T PHA02859         98 NKNVEPEILKILIDSGSSITEEDEDGKNLLHMYMCNFNVRINVIKLLIDSGVSFLNKDFDNNNILYSYILFHSDKKIFDF  177 (209)
T ss_pred             CccccHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhccCCHHHHHHHHHcCCCcccccCCCCcHHHHHHHhcCCHHHHHH
Confidence               35777777777777777777777777777665  346777777777777777777777777774 445566677777


Q ss_pred             HHHcCCCCcccCcCccCCHHHHHHHc
Q psy903          275 LLEYGAGINTHSNEFKESALTLACYK  300 (739)
Q Consensus       275 Ll~~~~~~~~~~~~~~~~~l~~A~~~  300 (739)
                      |+++|++++.. +..|.|||++|...
T Consensus       178 Ll~~Gadi~~~-d~~g~tpl~la~~~  202 (209)
T PHA02859        178 LTSLGIDINET-NKSGYNCYDLIKFR  202 (209)
T ss_pred             HHHcCCCCCCC-CCCCCCHHHHHhhh
Confidence            77776666653 33466676666654

>PHA02795 ankyrin-like protein; Provisional

Probab=99.95  E-value=1e-26  Score=223.42  Aligned_cols=197  Identities=18%  Similarity=0.186  Sum_probs=169.8

Q ss_pred             HHHHHHHcCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCC------CCCCCCCcHHHHHHH--cCcHHHHHHHHhCC
Q psy903          514 VADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVH------AKTQTGDTALTYACE--NGHTDVADLLLSYG  585 (739)
Q Consensus       514 ~v~~Ll~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~------~~d~~g~t~l~~A~~--~~~~~iv~~Ll~~~  585 (739)
                      +.+|++.+|.+++.....-  +|+..+..+++++|+.+|++++      .++..++|+||+++.  .|+.+++++|+++|
T Consensus        64 ~~~~~~~~~~~i~~~~~~~--~~~~~~~k~~~~~l~s~~~~~~~~~~~~~~~~~~~~~L~~~~~n~~n~~eiV~~LI~~G  141 (437)
T PHA02795         64 LYDYFRIHRDNIDQYIVDR--LFAYITYKDIISALVSKNYMEDIFSIIIKNCNSVQDLLLYYLSNAYVEIDIVDFMVDHG  141 (437)
T ss_pred             HHHHHHHcCcchhhhhhhh--HHhhcchHHHHHHHHhcccccchhhhhhhccccccHHHHHHHHhcCCCHHHHHHHHHCC
Confidence            4578888888876542222  8899999999999999999988      778889999999999  88999999999999


Q ss_pred             CCCC---CCcHHHHHHHcCCHHHHHHHhhCCCCCCcCC------CCCCcHHHHHHHcCCHHHHHHHHHcCCCC-----CC
Q psy903          586 ANLD---NSTMLIEAAKGGHANVVQLLLDFPRSVHAKT------QTGDTALTYACENGHTDVADLLLSYGANL-----DN  651 (739)
Q Consensus       586 ~~~~---~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~------~~g~t~l~~A~~~~~~~~v~~L~~~~~~~-----~~  651 (739)
                      ++++   +.||+|.|+..++.+++++|+++|++.....      ..+.|+++.|...++.+++++|+++|++.     .|
T Consensus       142 ADIn~~~~~t~lh~A~~~~~~eIVk~Lls~Ga~~~n~~~~~l~~~~~~t~l~~a~~~~~~eIve~LIs~GADIN~kD~~G  221 (437)
T PHA02795        142 AVIYKIECLNAYFRGICKKESSVVEFILNCGIPDENDVKLDLYKIIQYTRGFLVDEPTVLEIYKLCIPYIEDINQLDAGG  221 (437)
T ss_pred             CCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCcccccccchhhhhhccchhHHHHhcCHHHHHHHHHhCcCCcCcCCCCC
Confidence            9984   5789999999999999999999997432222      34778999999999999999999999874     58


Q ss_pred             chHHHHHHhCCChhHHHHHhcCCCcccCCCCCCCCCCCchhhhccCCCcccccCCCCCchHHHHHHHcC--------cHH
Q psy903          652 STMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENG--------HTD  723 (739)
Q Consensus       652 ~~~L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~--------~~~  723 (739)
                      .||||+|+..|+.+++++|+++|+.+                         +.+|..|.||||+|+..|        |.+
T Consensus       222 ~TpLh~Aa~~g~~eiVelLL~~GAdI-------------------------N~~d~~G~TpLh~Aa~~g~~~~~~~~~~e  276 (437)
T PHA02795        222 RTLLYRAIYAGYIDLVSWLLENGANV-------------------------NAVMSNGYTCLDVAVDRGSVIARRETHLK  276 (437)
T ss_pred             CCHHHHHHHcCCHHHHHHHHHCCCCC-------------------------CCcCCCCCCHHHHHHHcCCcccccccHHH
Confidence            89999999999999999999976654                         999999999999999998        579


Q ss_pred             HHHHHHHcCCCCCC
Q psy903          724 VADLLLSYGANLRN  737 (739)
Q Consensus       724 i~~~L~~~ga~~~~  737 (739)
                      ++++|+++||+++.
T Consensus       277 IvelLL~~gadI~~  290 (437)
T PHA02795        277 ILEILLREPLSIDC  290 (437)
T ss_pred             HHHHHHhCCCCCCc
Confidence            99999999999875

>KOG0502|consensus

Probab=99.94  E-value=1.5e-27  Score=195.53  Aligned_cols=213  Identities=26%  Similarity=0.330  Sum_probs=167.4

Q ss_pred             hhhcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccC
Q psy903            5 ACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATG   83 (739)
Q Consensus         5 A~~~g~~~~v~~ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~   83 (739)
                      |+++|+.+++...+. .-..++..|.+|+++++.|+-.|+.+++..++.+|++.|..+--+ ++|+.+++.         
T Consensus        69 ~~~s~nsd~~v~s~~~~~~~~~~t~p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p-~s~~slsVh---------  138 (296)
T KOG0502|consen   69 AVRSGNSDVAVQSAQLDPDAIDETDPEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMP-WSPLSLSVH---------  138 (296)
T ss_pred             hhhcCCcHHHHHhhccCCCCCCCCCchhhhhhhhcCCCCCcceeeeeecccccCCcccccc-CChhhHHHH---------
Confidence            556666666666655 222334455667777777777777777777777777766555333 355555554         


Q ss_pred             CCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHH
Q psy903           84 DGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLA  163 (739)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A  163 (739)
                                                                       ..+++.+..+.++  .+|..|..|.|||.||
T Consensus       139 -------------------------------------------------ql~L~~~~~~~~n--~VN~~De~GfTpLiWA  167 (296)
T KOG0502|consen  139 -------------------------------------------------QLHLDVVDLLVNN--KVNACDEFGFTPLIWA  167 (296)
T ss_pred             -------------------------------------------------HHHHHHHHHHhhc--cccCccccCchHhHHH
Confidence                                                             3356666666654  5788999999999999


Q ss_pred             HHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHH
Q psy903          164 CSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL  243 (739)
Q Consensus       164 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll  243 (739)
                      +.+|++.+|++|++.|+++....... .++|.+|++.|..++|++|+++++|+|..|-+|-|||-||++.++.+|++.|+
T Consensus       168 aa~G~i~vV~fLL~~GAdp~~lgk~r-esALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll  246 (296)
T KOG0502|consen  168 AAKGHIPVVQFLLNSGADPDALGKYR-ESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLL  246 (296)
T ss_pred             HhcCchHHHHHHHHcCCChhhhhhhh-hhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHH
Confidence            99999999999999999998776554 49999999999999999999999999999999999999999999999999999


Q ss_pred             HCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903          244 ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA  280 (739)
Q Consensus       244 ~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~  280 (739)
                      +.|++++..+..|++++..|+..|+. +++..+++-.
T Consensus       247 ~sGAd~t~e~dsGy~~mdlAValGyr-~Vqqvie~h~  282 (296)
T KOG0502|consen  247 NSGADVTQEDDSGYWIMDLAVALGYR-IVQQVIEKHA  282 (296)
T ss_pred             hcCCCcccccccCCcHHHHHHHhhhH-HHHHHHHHHH
Confidence            99999999999999999999999987 6666666533

>KOG0507|consensus

Probab=99.93  E-value=3.7e-25  Score=215.70  Aligned_cols=249  Identities=29%  Similarity=0.335  Sum_probs=190.6

Q ss_pred             hhhhhhcCCHHHHHHHHHc-C------------CCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcch
Q psy903            2 LVQACSDGDVKTVKKLLTE-G------------RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTP   68 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~~-g------------~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~   68 (739)
                      |..|++.||++.|..||+. +            ...|..|.+|.|+||.|+.+|+.+++++|+++.+-++..+.++. +|
T Consensus         7 l~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d~kg~-~p   85 (854)
T KOG0507|consen    7 LIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCDTKGI-LP   85 (854)
T ss_pred             HHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhhccCc-ce
Confidence            6789999999999999972 1            13577899999999999999999999999999999999997775 99


Q ss_pred             hHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCC
Q psy903           69 LMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRS  148 (739)
Q Consensus        69 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~  148 (739)
                      ||+|+..|            +-+.++.+....             -....+..++.++||.|+..|+.+++.+|+..|++
T Consensus        86 lhlaaw~g------------~~e~vkmll~q~-------------d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~ad  140 (854)
T KOG0507|consen   86 LHLAAWNG------------NLEIVKMLLLQT-------------DILNAVNIENETPLHLAAQHGHLEVVFYLLKKNAD  140 (854)
T ss_pred             EEehhhcC------------cchHHHHHHhcc-------------cCCCcccccCcCccchhhhhcchHHHHHHHhcCCC
Confidence            99999999            444444443322             11233445678888888888888888888888888


Q ss_pred             CCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCcc-------ccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCC
Q psy903          149 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVE-------DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSS  221 (739)
Q Consensus       149 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~-------~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~  221 (739)
                      +-..+..+.|+|..|++.|+.++|+.|++..-...       ......+-+|+|.|+++|+.++++.|++.|+++|....
T Consensus       141 p~i~nns~~t~ldlA~qfgr~~Vvq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~  220 (854)
T KOG0507|consen  141 PFIRNNSKETVLDLASRFGRAEVVQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTE  220 (854)
T ss_pred             ccccCcccccHHHHHHHhhhhHHHHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccc
Confidence            88888888888888888888888888887632211       12223345788888888888888888888888887776


Q ss_pred             CCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC---ChHHHHHHHH
Q psy903          222 SGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG---HVGVAKILLE  277 (739)
Q Consensus       222 ~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~---~~~ii~~Ll~  277 (739)
                      .| |+||.|+..|..++|.+|++.|.+...++.+|+|+|......-   ..+++-++..
T Consensus       221 ~g-talheaalcgk~evvr~ll~~gin~h~~n~~~qtaldil~d~~~~~~~ei~ga~~~  278 (854)
T KOG0507|consen  221 DG-TALHEAALCGKAEVVRFLLEIGINTHIKNQHGQTALDIIIDLQENRRYEIAGAVKN  278 (854)
T ss_pred             cc-hhhhhHhhcCcchhhhHHHhhccccccccccchHHHHHHHhcchhhhhhhhhhhhc
Confidence            65 7888888888888888888888888888888888877765443   3444444443

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.93  E-value=6e-25  Score=239.61  Aligned_cols=219  Identities=27%  Similarity=0.280  Sum_probs=166.9

Q ss_pred             ChhhhhhcCCHHHHHHHHHc--CCCCcccCCCCCcHHH-HHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccc
Q psy903            1 SLVQACSDGDVKTVKKLLTE--GRSVHETTDEGESLLS-LACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF   77 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~--g~~~~~~~~~g~t~L~-~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~   77 (739)
                      +|+.|+..||.+.|+.+++.  +.++|..|..|+|||| .|+..++.+++++|+++|+    .+..| .||||.|+..+.
T Consensus        20 ~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~t~Lh~~A~~~~~~eiv~lLl~~g~----~~~~G-~T~Lh~A~~~~~   94 (743)
T TIGR00870        20 AFLPAAERGDLASVYRDLEEPKKLNINCPDRLGRSALFVAAIENENLELTELLLNLSC----RGAVG-DTLLHAISLEYV   94 (743)
T ss_pred             HHHHHHHcCCHHHHHHHhccccccCCCCcCccchhHHHHHHHhcChHHHHHHHHhCCC----CCCcC-hHHHHHHHhccH
Confidence            37899999999999999998  8999999999999999 9999999999999999998    34344 499999987431


Q ss_pred             cccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCC---------C
Q psy903           78 GKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGR---------S  148 (739)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~---------~  148 (739)
                                   +.+.                                          .++..+.+.+.         +
T Consensus        95 -------------~~v~------------------------------------------~ll~~l~~~~~~~~~~~~~~~  119 (743)
T TIGR00870        95 -------------DAVE------------------------------------------AILLHLLAAFRKSGPLELAND  119 (743)
T ss_pred             -------------HHHH------------------------------------------HHHHHHhhcccccCchhhhcc
Confidence                         1111                                          11111111110         0


Q ss_pred             -CCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccC-------------CCCCCcHHHHHHHcCcHHHHHHHHHCCC
Q psy903          149 -VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG-------------IKGECTPLMEAASSGFIEIVRLLINHGA  214 (739)
Q Consensus       149 -~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-------------~~~~~t~L~~A~~~~~~~~~~~Ll~~g~  214 (739)
                       .......|.||||+|+..|+.++|++|+++|++++...             ...|.||||.|+..|+.+++++|+++|+
T Consensus       120 ~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~lLl~~ga  199 (743)
T TIGR00870       120 QYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVALLSEDPA  199 (743)
T ss_pred             ccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHHHHhcCCc
Confidence             01112357777777777777777777777777766432             1246799999999999999999999999


Q ss_pred             CCCCCCCCCCcHHHHHHhcC---------cHHHHHHHHHCCCCC-------CCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          215 DVNGQSSSGNTPLMYACAGG---------HEAVVRVLLECGANV-------EDHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       215 ~~~~~~~~~~t~L~~A~~~~---------~~~~v~~Ll~~~~~~-------~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                      +++.+|..|+||||+|+..+         ...+.+++++.++..       +..|.+|.|||+.|+..|+.+++++|++.
T Consensus       200 din~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l~~lLL~~  279 (743)
T TIGR00870       200 DILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVLFRLKLAI  279 (743)
T ss_pred             chhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccHHHHHHHH
Confidence            99999999999999999986         234566666655443       56788999999999999999999999985


Q ss_pred             C
Q psy903          279 G  279 (739)
Q Consensus       279 ~  279 (739)
                      +
T Consensus       280 ~  280 (743)
T TIGR00870       280 K  280 (743)
T ss_pred             H
Confidence            4

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0502|consensus

Probab=99.92  E-value=9.6e-26  Score=185.08  Aligned_cols=200  Identities=28%  Similarity=0.317  Sum_probs=141.8

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHc
Q psy903          121 PQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS  200 (739)
Q Consensus       121 ~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~  200 (739)
                      +.+..+++.++-.++...+..++.+|...|..+-.+.+|+.+++...+.+.+..+.++..+   ..+..|+|||.+|+..
T Consensus        94 p~g~~~~~v~ap~~s~~k~sttltN~~rgnevs~~p~s~~slsVhql~L~~~~~~~~n~VN---~~De~GfTpLiWAaa~  170 (296)
T KOG0502|consen   94 PEGWSALLVAAPCGSVDKVSTTLTNGARGNEVSLMPWSPLSLSVHQLHLDVVDLLVNNKVN---ACDEFGFTPLIWAAAK  170 (296)
T ss_pred             chhhhhhhhcCCCCCcceeeeeecccccCCccccccCChhhHHHHHHHHHHHHHHhhcccc---CccccCchHhHHHHhc
Confidence            3445555555556666677777777777777777777788888777777777776665432   2234456788888888


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903          201 GFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA  280 (739)
Q Consensus       201 ~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~  280 (739)
                      |+.++|++|++.|++++.......|+|..|+..|..++|++|++++.++|..|.+|-|||-+|++.++.++++.|++.|+
T Consensus       171 G~i~vV~fLL~~GAdp~~lgk~resALsLAt~ggytdiV~lLL~r~vdVNvyDwNGgTpLlyAvrgnhvkcve~Ll~sGA  250 (296)
T KOG0502|consen  171 GHIPVVQFLLNSGADPDALGKYRESALSLATRGGYTDIVELLLTREVDVNVYDWNGGTPLLYAVRGNHVKCVESLLNSGA  250 (296)
T ss_pred             CchHHHHHHHHcCCChhhhhhhhhhhHhHHhcCChHHHHHHHHhcCCCcceeccCCCceeeeeecCChHHHHHHHHhcCC
Confidence            88888888887777777777777777888877777788888887777777777777778877777777777887777777


Q ss_pred             CCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCc
Q psy903          281 GINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHT  325 (739)
Q Consensus       281 ~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~  325 (739)
                      ++....+ +|.+++..|+..|+- +|+..+++-+....++....+
T Consensus       251 d~t~e~d-sGy~~mdlAValGyr-~Vqqvie~h~lkl~Q~~~~~~  293 (296)
T KOG0502|consen  251 DVTQEDD-SGYWIMDLAVALGYR-IVQQVIEKHALKLCQDSEKRT  293 (296)
T ss_pred             Ccccccc-cCCcHHHHHHHhhhH-HHHHHHHHHHHHHhhcccCCC
Confidence            7776544 477777777777766 777777665544444443333

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.91  E-value=2.4e-23  Score=227.67  Aligned_cols=176  Identities=27%  Similarity=0.293  Sum_probs=148.7

Q ss_pred             cCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHH
Q psy903           27 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDE  106 (739)
Q Consensus        27 ~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (739)
                      .+.++.++||.|+..|+.++++.|+++|++++..|..|+ ||||+|+..|                              
T Consensus       521 ~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~G~-TpLh~Aa~~g------------------------------  569 (823)
T PLN03192        521 DDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSKGR-TPLHIAASKG------------------------------  569 (823)
T ss_pred             CCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-CHHHHHHHcC------------------------------
Confidence            344567889999999999999999999999988887765 7777766655                              


Q ss_pred             HHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccC
Q psy903          107 AAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG  186 (739)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~  186 (739)
                                                  +.++++.|++.|++++.+|.+|.||||+|+..|+.+++++|++.++..+.  
T Consensus       570 ----------------------------~~~~v~~Ll~~gadin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--  619 (823)
T PLN03192        570 ----------------------------YEDCVLVLLKHACNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--  619 (823)
T ss_pred             ----------------------------hHHHHHHHHhcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--
Confidence                                        67888999999999999999999999999999999999999987765432  


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCC-CcHHHHHH
Q psy903          187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENG-HTPLMEAA  264 (739)
Q Consensus       187 ~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-~t~L~~A~  264 (739)
                       ..+.++||.|+..|+.++++.|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..| .||+..+.
T Consensus       620 -~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~d~~G~TpLh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~  697 (823)
T PLN03192        620 -HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSEDHQGATALQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELRE  697 (823)
T ss_pred             -ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHH
Confidence             234489999999999999999999999999999999999999999999999999999999999888887 78877663

>TIGR00870 trp transient-receptor-potential calcium channel protein

Probab=99.90  E-value=4.5e-23  Score=225.00  Aligned_cols=225  Identities=22%  Similarity=0.203  Sum_probs=175.5

Q ss_pred             CCCCcHHHHHHhcCcHHHHHHHHHc--cccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHH
Q psy903           29 DEGESLLSLACSAGYYELAQVLLAM--HANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDE  106 (739)
Q Consensus        29 ~~g~t~L~~A~~~~~~~iv~~Ll~~--ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (739)
                      ..+.++|+.|+..|+.+.++.+++.  +.+++..|..|. ||||.+|                                 
T Consensus        15 ~~~~~~~l~A~~~g~~~~v~~lL~~~~~~~in~~d~~G~-t~Lh~~A---------------------------------   60 (743)
T TIGR00870        15 SDEEKAFLPAAERGDLASVYRDLEEPKKLNINCPDRLGR-SALFVAA---------------------------------   60 (743)
T ss_pred             CHHHHHHHHHHHcCCHHHHHHHhccccccCCCCcCccch-hHHHHHH---------------------------------
Confidence            4578899999999999999999999  888887776665 7777333                                 


Q ss_pred             HHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCc-
Q psy903          107 AAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA---GYYELAQVLLAMHANV-  182 (739)
Q Consensus       107 ~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~-  182 (739)
                                              +..++.++++.|++.|.    .+..|.||||.|+..   +..+++..+...+... 
T Consensus        61 ------------------------~~~~~~eiv~lLl~~g~----~~~~G~T~Lh~A~~~~~~~v~~ll~~l~~~~~~~~  112 (743)
T TIGR00870        61 ------------------------IENENLELTELLLNLSC----RGAVGDTLLHAISLEYVDAVEAILLHLLAAFRKSG  112 (743)
T ss_pred             ------------------------HhcChHHHHHHHHhCCC----CCCcChHHHHHHHhccHHHHHHHHHHHhhcccccC
Confidence                                    23357889999999876    577899999999872   2233445555544321 


Q ss_pred             --------cccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC--------------CCCCcHHHHHHhcCcHHHHH
Q psy903          183 --------EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS--------------SSGNTPLMYACAGGHEAVVR  240 (739)
Q Consensus       183 --------~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~--------------~~~~t~L~~A~~~~~~~~v~  240 (739)
                              .......|.||||+|+..|+.+++++|+++|++++.++              ..|.||||.|+..|+.++++
T Consensus       113 ~~~~~~~~~~~~~~~G~TpLhlAa~~~~~eiVklLL~~GAdv~~~~~~~~~~~~~~~~~~~~g~tpL~~Aa~~~~~~iv~  192 (743)
T TIGR00870       113 PLELANDQYTSEFTPGITALHLAAHRQNYEIVKLLLERGASVPARACGDFFVKSQGVDSFYHGESPLNAAACLGSPSIVA  192 (743)
T ss_pred             chhhhccccccccCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCcCcCCchhhcCCCCCcccccccHHHHHHHhCCHHHHH
Confidence                    11123457899999999999999999999999998653              35899999999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHhcC---------ChHHHHHHHHcCCCCc------ccCcCccCCHHHHHHHcCCHHH
Q psy903          241 VLLECGANVEDHNENGHTPLMEAASAG---------HVGVAKILLEYGAGIN------THSNEFKESALTLACYKGHLDM  305 (739)
Q Consensus       241 ~Ll~~~~~~~~~~~~~~t~L~~A~~~~---------~~~ii~~Ll~~~~~~~------~~~~~~~~~~l~~A~~~~~~~~  305 (739)
                      +|+++|++++..|..|+||||+|+..+         ...+.+++++.+....      ...+..|.|||+.|+..|+.++
T Consensus       193 lLl~~gadin~~d~~g~T~Lh~A~~~~~~~~~~~~l~~~~~~~l~~ll~~~~~~~el~~i~N~~g~TPL~~A~~~g~~~l  272 (743)
T TIGR00870       193 LLSEDPADILTADSLGNTLLHLLVMENEFKAEYEELSCQMYNFALSLLDKLRDSKELEVILNHQGLTPLKLAAKEGRIVL  272 (743)
T ss_pred             HHhcCCcchhhHhhhhhHHHHHHHhhhhhhHHHHHHHHHHHHHHHHHHhccCChHhhhhhcCCCCCCchhhhhhcCCccH
Confidence            999999999999999999999999986         2335556665544332      2235568899999999999999


Q ss_pred             HHHHHHcCCC
Q psy903          306 VRFLLSAGAD  315 (739)
Q Consensus       306 v~~Ll~~~~~  315 (739)
                      +++|++.+.+
T Consensus       273 ~~lLL~~~~~  282 (743)
T TIGR00870       273 FRLKLAIKYK  282 (743)
T ss_pred             HHHHHHHHHh
Confidence            9999986443

after chronic exposure to capsaicin. (McCleskey and Gold, 1999).

>KOG0507|consensus

Probab=99.90  E-value=4.1e-23  Score=201.63  Aligned_cols=222  Identities=31%  Similarity=0.362  Sum_probs=186.9

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcC-------------CCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCC
Q psy903          125 RSLVQACSDGDVKTVKKLLTEG-------------RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGEC  191 (739)
Q Consensus       125 ~~l~~A~~~~~~~~~~~ll~~~-------------~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~  191 (739)
                      +-+..|++.|+.+.+..|++..             ...+..|.+|.|+||.|+.+|+.+++++|++..+-+...+ ..|.
T Consensus         5 qel~~a~ka~d~~tva~ll~~~~~r~~~l~~~trsds~n~qd~~gfTalhha~Lng~~~is~llle~ea~ldl~d-~kg~   83 (854)
T KOG0507|consen    5 QELIDACKAGDYDTVALLLSSKKGRSGLLFFTTRSDSHNLQDYSGFTLLHHAVLNGQNQISKLLLDYEALLDLCD-TKGI   83 (854)
T ss_pred             hhHHHhhhcccHHHHHHhccCCCCCCCCCCCCCCCccccccCccchhHHHHHHhcCchHHHHHHhcchhhhhhhh-ccCc
Confidence            3478899999999999999752             2467788899999999999999999999999999888887 5567


Q ss_pred             cHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHH
Q psy903          192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGV  271 (739)
Q Consensus       192 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~i  271 (739)
                      +|||+|+..|+.++++.|+.++..+|..+..|.||||.|+..|+.+++.+|+.+|+++..++..+.|+|..|++.|..++
T Consensus        84 ~plhlaaw~g~~e~vkmll~q~d~~na~~~e~~tplhlaaqhgh~dvv~~Ll~~~adp~i~nns~~t~ldlA~qfgr~~V  163 (854)
T KOG0507|consen   84 LPLHLAAWNGNLEIVKMLLLQTDILNAVNIENETPLHLAAQHGHLEVVFYLLKKNADPFIRNNSKETVLDLASRFGRAEV  163 (854)
T ss_pred             ceEEehhhcCcchHHHHHHhcccCCCcccccCcCccchhhhhcchHHHHHHHhcCCCccccCcccccHHHHHHHhhhhHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHcCCCCc-------ccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHH
Q psy903          272 AKILLEYGAGIN-------THSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD  344 (739)
Q Consensus       272 i~~Ll~~~~~~~-------~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~  344 (739)
                      ++.|++..-...       ......+.+++|.|+++|+.++++.|++.|.+++.....| |+||.|+..|..+++.+|++
T Consensus       164 vq~ll~~~~~~~~~~~~~~~~~~~~~~~plHlaakngh~~~~~~ll~ag~din~~t~~g-talheaalcgk~evvr~ll~  242 (854)
T KOG0507|consen  164 VQMLLQKKFPVQSSLRVGDIKRPFPAIYPLHLAAKNGHVECMQALLEAGFDINYTTEDG-TALHEAALCGKAEVVRFLLE  242 (854)
T ss_pred             HHHHhhhccchhhcccCCCCCCCCCCcCCcchhhhcchHHHHHHHHhcCCCcccccccc-hhhhhHhhcCcchhhhHHHh
Confidence            999998622211       1112234577888888888888888888888777776664 67777777777777777666


Q ss_pred             cCCC
Q psy903          345 SGAQ  348 (739)
Q Consensus       345 ~~~~  348 (739)
                      .|..
T Consensus       243 ~gin  246 (854)
T KOG0507|consen  243 IGIN  246 (854)
T ss_pred             hccc
Confidence            5543

>KOG0505|consensus

Probab=99.90  E-value=2e-23  Score=196.42  Aligned_cols=203  Identities=32%  Similarity=0.465  Sum_probs=144.7

Q ss_pred             hhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccc
Q psy903            2 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLA   81 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~   81 (739)
                      +..|+..||++-|+.|+..|+.++..+.+|.|+||-+|.-.+.+||++|+++|++++..|+.+. ||+|.|+..|     
T Consensus        44 ~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e~w-tPlhaaascg-----  117 (527)
T KOG0505|consen   44 FLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNEGW-TPLHAAASCG-----  117 (527)
T ss_pred             HHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccccC-Ccchhhcccc-----
Confidence            6789999999999999999999999999999999999999999999999999999999998875 9999998876     


Q ss_pred             cCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHH
Q psy903           82 TGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS  161 (739)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~  161 (739)
                                                                           +..++++|++.|+++...+.+|..|+.
T Consensus       118 -----------------------------------------------------~~~i~~~li~~gA~~~avNsdg~~P~d  144 (527)
T KOG0505|consen  118 -----------------------------------------------------YLNIVEYLIQHGANLLAVNSDGNMPYD  144 (527)
T ss_pred             -----------------------------------------------------cHHHHHHHHHhhhhhhhccCCCCCccc
Confidence                                                                 577888888888888887777777766


Q ss_pred             HHHHcCcHHHHHH--------------------------HHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy903          162 LACSAGYYELAQV--------------------------LLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGAD  215 (739)
Q Consensus       162 ~A~~~~~~~~v~~--------------------------Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~  215 (739)
                      .+..-...++...                          .+..|......... |-|.||.|+.+|+.++.++|++.|.+
T Consensus       145 l~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~l~~G~~~d~~~~r-G~T~lHvAaa~Gy~e~~~lLl~ag~~  223 (527)
T KOG0505|consen  145 LAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQWLNAGAELDARHAR-GATALHVAAANGYTEVAALLLQAGYS  223 (527)
T ss_pred             cccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHHHhccccccccccc-cchHHHHHHhhhHHHHHHHHHHhccC
Confidence            6654333333222                          22344444444444 33555555555555555555555555


Q ss_pred             CCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903          216 VNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAA  264 (739)
Q Consensus       216 ~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~  264 (739)
                      ++.+|.+|+||||.|+..|..+++++|+++|++.+.....|.+|+..|.
T Consensus       224 ~~~~D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~d  272 (527)
T KOG0505|consen  224 VNIKDYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVAD  272 (527)
T ss_pred             cccccccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchh
Confidence            5555555555555555555555555555555555555555555555543

>PLN03192 Voltage-dependent potassium channel; Provisional

Probab=99.89  E-value=1.1e-21  Score=214.74  Aligned_cols=193  Identities=25%  Similarity=0.322  Sum_probs=139.7

Q ss_pred             CCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCC
Q psy903          134 GDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG  213 (739)
Q Consensus       134 ~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g  213 (739)
                      .+.++-..+.+.+..  ..+..+.++|+.|+..|+.++++.|++.|++++..+.. |.||||+|+..|+.+++++|+++|
T Consensus       505 ~~l~v~~ll~~~~~~--~~~~~~~~~L~~Aa~~g~~~~l~~Ll~~G~d~n~~d~~-G~TpLh~Aa~~g~~~~v~~Ll~~g  581 (823)
T PLN03192        505 HDLNVGDLLGDNGGE--HDDPNMASNLLTVASTGNAALLEELLKAKLDPDIGDSK-GRTPLHIAASKGYEDCVLVLLKHA  581 (823)
T ss_pred             ccccHHHHHhhcccc--cCCccchhHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHcChHHHHHHHHhcC
Confidence            444445555555433  23334567788888888888888888888777766544 458888888888888888888888


Q ss_pred             CCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCH
Q psy903          214 ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESA  293 (739)
Q Consensus       214 ~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~  293 (739)
                      ++++.+|..|+||||+|+..|+.+++++|++.++..+.  ..+.++||.|+..|+.+++++|+++|++++.. +..|.||
T Consensus       582 adin~~d~~G~TpL~~A~~~g~~~iv~~L~~~~~~~~~--~~~~~~L~~Aa~~g~~~~v~~Ll~~Gadin~~-d~~G~Tp  658 (823)
T PLN03192        582 CNVHIRDANGNTALWNAISAKHHKIFRILYHFASISDP--HAAGDLLCTAAKRNDLTAMKELLKQGLNVDSE-DHQGATA  658 (823)
T ss_pred             CCCCCcCCCCCCHHHHHHHhCCHHHHHHHHhcCcccCc--ccCchHHHHHHHhCCHHHHHHHHHCCCCCCCC-CCCCCCH
Confidence            88888888888888888888888888888777655433  34557888888888888888888888877764 4457788


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCcC-CcHHHHHHh
Q psy903          294 LTLACYKGHLDMVRFLLSAGADQEHKTDEM-HTALMEASM  332 (739)
Q Consensus       294 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-~~~l~~a~~  332 (739)
                      ||.|+..|+.+++++|+++|++++..+..+ .+|...+..
T Consensus       659 Lh~A~~~g~~~iv~~Ll~~GAdv~~~~~~g~~t~~~l~~~  698 (823)
T PLN03192        659 LQVAMAEDHVDMVRLLIMNGADVDKANTDDDFSPTELREL  698 (823)
T ss_pred             HHHHHHCCcHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHH
Confidence            888888888888888888888887777776 677766543

>KOG0514|consensus

Probab=99.86  E-value=3.6e-21  Score=171.23  Aligned_cols=159  Identities=31%  Similarity=0.441  Sum_probs=75.3

Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHc-----CcHHHHHHHHHCCCCCCCC-CCCCCc
Q psy903          152 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS-----GFIEIVRLLINHGADVNGQ-SSSGNT  225 (739)
Q Consensus       152 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~-----~~~~~~~~Ll~~g~~~~~~-~~~~~t  225 (739)
                      .|.+|+|+||||+..+++++|+.|++.|..-.....+.||||+++|+..     .+.++|..|.+-| ++|.+ ...|.|
T Consensus       264 aDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~gQT  342 (452)
T KOG0514|consen  264 ADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQHGQT  342 (452)
T ss_pred             hcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhhcch
Confidence            4445555555555555555555555555333333334445555554432     2344444444432 23322 233455


Q ss_pred             HHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHH
Q psy903          226 PLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM  305 (739)
Q Consensus       226 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~  305 (739)
                      +|++|+.+|+.++|+.||.+|+|+|.+|.+|.|+|+.|+..|+.||+++|+.....-...++..|.|+|.+|...|+-+|
T Consensus       343 ALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~p~cd~sLtD~DgSTAl~IAleagh~eI  422 (452)
T KOG0514|consen  343 ALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAVPSCDISLTDVDGSTALSIALEAGHREI  422 (452)
T ss_pred             hhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhccCcccceeecCCCchhhhhHHhcCchHH
Confidence            55555555555555555555555555555555555555555555555555543322222233445555555555555555


Q ss_pred             HHHHHH
Q psy903          306 VRFLLS  311 (739)
Q Consensus       306 v~~Ll~  311 (739)
                      .-+|..
T Consensus       423 a~mlYa  428 (452)
T KOG0514|consen  423 AVMLYA  428 (452)
T ss_pred             HHHHHH
Confidence            544443

>KOG0514|consensus

Probab=99.85  E-value=3e-21  Score=171.79  Aligned_cols=163  Identities=39%  Similarity=0.534  Sum_probs=146.9

Q ss_pred             CCCCCCCCCcHHHHHHhcCcHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhc-----CChHHHHHHHHcCCCCcccCcCc
Q psy903          216 VNGQSSSGNTPLMYACAGGHEAVVRVLLECG-ANVEDHNENGHTPLMEAASA-----GHVGVAKILLEYGAGINTHSNEF  289 (739)
Q Consensus       216 ~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~t~L~~A~~~-----~~~~ii~~Ll~~~~~~~~~~~~~  289 (739)
                      +|..|.+|+|+||||+.+.++++|+.||+.| ++++..++-|+||+++++..     .+.++|..|+..| +++.+....
T Consensus       261 VNlaDsNGNTALHYsVSHaNF~VV~~LLDSgvC~VD~qNrAGYtpiMLaALA~lk~~~d~~vV~~LF~mg-nVNaKAsQ~  339 (452)
T KOG0514|consen  261 VNLADSNGNTALHYAVSHANFDVVSILLDSGVCDVDQQNRAGYTPVMLAALAKLKQPADRTVVERLFKMG-DVNAKASQH  339 (452)
T ss_pred             hhhhcCCCCeeeeeeecccchHHHHHHhccCcccccccccccccHHHHHHHHhhcchhhHHHHHHHHhcc-Ccchhhhhh
Confidence            4678999999999999999999999999998 78999999999999998764     3688999998875 456666777


Q ss_pred             cCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCC
Q psy903          290 KESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSS  369 (739)
Q Consensus       290 ~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~  369 (739)
                      |+|+|++|+..|+.++|+.|+..|+|+|.+|.+|.|+|+.|+..||.|++++|+..                        
T Consensus       340 gQTALMLAVSHGr~d~vk~LLacgAdVNiQDdDGSTALMCA~EHGhkEivklLLA~------------------------  395 (452)
T KOG0514|consen  340 GQTALMLAVSHGRVDMVKALLACGADVNIQDDDGSTALMCAAEHGHKEIVKLLLAV------------------------  395 (452)
T ss_pred             cchhhhhhhhcCcHHHHHHHHHccCCCccccCCccHHHhhhhhhChHHHHHHHhcc------------------------
Confidence            99999999999999999999999999999999999999999999999999998863                        


Q ss_pred             cccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHc
Q psy903          370 ISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM  429 (739)
Q Consensus       370 ~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~  429 (739)
                                                .++++..+|.+|.|+|.+|...|+.||.-.|+.+
T Consensus       396 --------------------------p~cd~sLtD~DgSTAl~IAleagh~eIa~mlYa~  429 (452)
T KOG0514|consen  396 --------------------------PSCDISLTDVDGSTALSIALEAGHREIAVMLYAH  429 (452)
T ss_pred             --------------------------CcccceeecCCCchhhhhHHhcCchHHHHHHHHH
Confidence                                      3456667899999999999999999999999865

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.85  E-value=1.3e-20  Score=162.81  Aligned_cols=135  Identities=18%  Similarity=0.255  Sum_probs=69.8

Q ss_pred             CCchHHHHHHHcCCH----HHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHH---HHHHHhCCCCccccCCCCCCcHH
Q psy903          122 QNERSLVQACSDGDV----KTVKKLLTEGRSVHETTDEGESLLSLACSAGYYEL---AQVLLAMHANVEDRGIKGECTPL  194 (739)
Q Consensus       122 ~~~~~l~~A~~~~~~----~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~---v~~Ll~~~~~~~~~~~~~~~t~L  194 (739)
                      .+.++|+.||+.|+.    +++++|++.|.+++..|..|.||||+|+..|+.+.   +++|++.|++++..+...|.|||
T Consensus        19 ~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin~~d~~~g~TpL   98 (166)
T PHA02743         19 DEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDHHGRQCTHMVAWYDRANAVMKIELLVNMGADINARELGTGNTLL   98 (166)
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCCCCCcHHHHHHHhCccCHHHHHHHHHHcCCCCCCCCCCCCCcHH
Confidence            344455555555555    33334445555555555555555555555554332   45555555555544333344555


Q ss_pred             HHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCC
Q psy903          195 MEAASSGFIEIVRLLIN-HGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENG  256 (739)
Q Consensus       195 ~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~  256 (739)
                      |+|+..++.+++++|+. .|++++.++..|.||||+|+..++.+++++|+++|++++.++..|
T Consensus        99 h~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~  161 (166)
T PHA02743         99 HIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLSIG  161 (166)
T ss_pred             HHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcccCC
Confidence            55555555555555553 455555555555555555555555555555555555555444433

>PHA02743 Viral ankyrin protein; Provisional

Probab=99.84  E-value=3.1e-20  Score=160.41  Aligned_cols=142  Identities=20%  Similarity=0.166  Sum_probs=109.8

Q ss_pred             cCCCCCcCCCCCCcHHHHHHHcCcH----HHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHH---HHHHHHHCCCCCC
Q psy903          145 EGRSVHETTDEGESLLSLACSAGYY----ELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIE---IVRLLINHGADVN  217 (739)
Q Consensus       145 ~~~~~~~~~~~g~t~L~~A~~~~~~----~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~---~~~~Ll~~g~~~~  217 (739)
                      +|++++..+..+.++||.|++.|+.    +++++|.+.++.++..+. .|+||||+|+..|+.+   ++++|+++|++++
T Consensus         9 ~~~~~~~~~~~~~~~l~~a~~~g~~~~l~~~~~~l~~~g~~~~~~d~-~g~t~Lh~Aa~~g~~~~~~~i~~Ll~~Gadin   87 (166)
T PHA02743          9 NNLGAVEIDEDEQNTFLRICRTGNIYELMEVAPFISGDGHLLHRYDH-HGRQCTHMVAWYDRANAVMKIELLVNMGADIN   87 (166)
T ss_pred             cchHHhhhccCCCcHHHHHHHcCCHHHHHHHHHHHhhcchhhhccCC-CCCcHHHHHHHhCccCHHHHHHHHHHcCCCCC
Confidence            4566777777778888888888887    566677777777665554 3568888888887754   3788888888888


Q ss_pred             CCC-CCCCcHHHHHHhcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCc
Q psy903          218 GQS-SSGNTPLMYACAGGHEAVVRVLLE-CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSN  287 (739)
Q Consensus       218 ~~~-~~~~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~  287 (739)
                      .++ ..|.||||+|+..++.+++++|++ .|++++.++..|.||||+|+..++.+++++|+++|++++....
T Consensus        88 ~~d~~~g~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~tpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~  159 (166)
T PHA02743         88 ARELGTGNTLLHIAASTKNYELAEWLCRQLGVNLGAINYQHETAYHIAYKMRDRRMMEILRANGAVCDDPLS  159 (166)
T ss_pred             CCCCCCCCcHHHHHHHhCCHHHHHHHHhccCCCccCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccc
Confidence            887 478888888888888888888884 7888888888888888888888888888888888877766443

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.84  E-value=6.3e-20  Score=170.04  Aligned_cols=147  Identities=22%  Similarity=0.264  Sum_probs=83.2

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCccccC---CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCC-CCCCCcHHHHHHhcC
Q psy903          159 LLSLACSAGYYELAQVLLAMHANVEDRG---IKGECTPLMEAASSGFIEIVRLLINHGADVNGQ-SSSGNTPLMYACAGG  234 (739)
Q Consensus       159 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~---~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-~~~~~t~L~~A~~~~  234 (739)
                      +||.|+..|+.+++++|+++|++++..+   ...|.||||+|+..++.+++++|+++|++++.. +..|.||||.|+..+
T Consensus        36 lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa~~~  115 (300)
T PHA02884         36 ILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISVLHG  115 (300)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHHHcC
Confidence            4444555556666666666666655542   234456666666666666666666666666654 345666666666666


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCC
Q psy903          235 HEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA  314 (739)
Q Consensus       235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~  314 (739)
                      +.+++++|+++|++++.+|..|.||||+|+..++.+++..+...  .    .+.++.+|.+++   ++.+++++|++++.
T Consensus       116 ~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~--~----~~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        116 CLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDN--E----ISNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCC--c----ccccccChhhhh---ccHHHHHHHHHHHH
Confidence            66666666666666666666666666666665555555444321  1    122344555543   24566666666554

>KOG0505|consensus

Probab=99.83  E-value=8.5e-20  Score=172.26  Aligned_cols=208  Identities=32%  Similarity=0.429  Sum_probs=178.5

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903          122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG  201 (739)
Q Consensus       122 ~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~  201 (739)
                      .....+..|+..|+.+-+..|+..|++++..+.+|.|+||-++...+.++|++|+++|++++..+.. +|||||.|+..|
T Consensus        39 ~~sa~~l~A~~~~d~~ev~~ll~~ga~~~~~n~DglTalhq~~id~~~e~v~~l~e~ga~Vn~~d~e-~wtPlhaaascg  117 (527)
T KOG0505|consen   39 EDSAVFLEACSRGDLEEVRKLLNRGASPNLCNVDGLTALHQACIDDNLEMVKFLVENGANVNAQDNE-GWTPLHAAASCG  117 (527)
T ss_pred             CchHHHHhccccccHHHHHHHhccCCCccccCCccchhHHHHHhcccHHHHHHHHHhcCCccccccc-cCCcchhhcccc
Confidence            3455688999999999999999999999999999999999999999999999999999999887755 589999999999


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcH---------------------------HHHHHHHHCCCCCCCCCC
Q psy903          202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE---------------------------AVVRVLLECGANVEDHNE  254 (739)
Q Consensus       202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~---------------------------~~v~~Ll~~~~~~~~~~~  254 (739)
                      +..++++|+++|+++...+..|..|+..+...-..                           ++-.+ +..|...+..+.
T Consensus       118 ~~~i~~~li~~gA~~~avNsdg~~P~dl~e~ea~~~~l~~~~~r~gi~iea~R~~~e~~ml~D~~q~-l~~G~~~d~~~~  196 (527)
T KOG0505|consen  118 YLNIVEYLIQHGANLLAVNSDGNMPYDLAEDEATLDVLETEMARQGIDIEAARKAEEQTMLDDARQW-LNAGAELDARHA  196 (527)
T ss_pred             cHHHHHHHHHhhhhhhhccCCCCCccccccCcchhHHHHHHHHHhcccHHHHhhhhHHHHHHHHHHH-Hhcccccccccc
Confidence            99999999999999888888887776654322111                           22233 347777888877


Q ss_pred             CCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHh
Q psy903          255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASM  332 (739)
Q Consensus       255 ~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~  332 (739)
                      .|-|.||.|+.+|..++.++|++.|.+++.. +..|++|||.|+..|..+++++|+++|++++.....|.+|+..+..
T Consensus       197 rG~T~lHvAaa~Gy~e~~~lLl~ag~~~~~~-D~dgWtPlHAAA~Wg~~~~~elL~~~ga~~d~~t~~g~~p~dv~de  273 (527)
T KOG0505|consen  197 RGATALHVAAANGYTEVAALLLQAGYSVNIK-DYDGWTPLHAAAHWGQEDACELLVEHGADMDAKTKMGETPLDVADE  273 (527)
T ss_pred             ccchHHHHHHhhhHHHHHHHHHHhccCcccc-cccCCCcccHHHHhhhHhHHHHHHHhhcccchhhhcCCCCccchhh
Confidence            7999999999999999999999999988875 5559999999999999999999999999999999999999887754

>PHA02884 ankyrin repeat protein; Provisional

Probab=99.82  E-value=3.9e-19  Score=164.82  Aligned_cols=144  Identities=17%  Similarity=0.187  Sum_probs=119.0

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC----CCCCcHHHHHHHcCcHHHHHHHHhCCCCCC------CCcHHHHHH
Q psy903          529 ASTPLMEAAQEGHLELVRYLLDSGAQVHAKT----QTGDTALTYACENGHTDVADLLLSYGANLD------NSTMLIEAA  598 (739)
Q Consensus       529 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d----~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~------~~~~l~~A~  598 (739)
                      ..++|+.|++.++.+++++|+++|++++.++    ..|.||||+|+..++.+++++|+++|++++      |.||||.|+
T Consensus        33 ~~~lL~~A~~~~~~eivk~LL~~GAdiN~~~~~sd~~g~TpLh~Aa~~~~~eivklLL~~GADVN~~~~~~g~TpLh~Aa  112 (300)
T PHA02884         33 IANILYSSIKFHYTDIIDAILKLGADPEAPFPLSENSKTNPLIYAIDCDNDDAAKLLIRYGADVNRYAEEAKITPLYISV  112 (300)
T ss_pred             CCHHHHHHHHcCCHHHHHHHHHCCCCccccCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcCcccCCCCCCHHHHHH
Confidence            3467777888888899999999998888874    578899999998889999999998887664      568899999


Q ss_pred             HcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCchHHHHHHhCCChhHHHHHhcCCC
Q psy903          599 KGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPR  675 (739)
Q Consensus       599 ~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~L~~A~~~g~~~~v~~L~~~~~  675 (739)
                      ..++.+++++|+++|++++.+|..|.|||++|++.++.+++..+...+.+..+.+|.+.+   ++.++++.|+.+..
T Consensus       113 ~~~~~eivklLL~~GAdin~kd~~G~TpL~~A~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~n~ei~~~Lish~v  186 (300)
T PHA02884        113 LHGCLKCLEILLSYGADINIQTNDMVTPIELALMICNNFLAFMICDNEISNFYKHPKKIL---INFDILKILVSHFI  186 (300)
T ss_pred             HcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHhCChhHHHHhcCCcccccccChhhhh---ccHHHHHHHHHHHH
Confidence            999999999999999999999999999999999988888887777666666777787764   46788888887643

>PHA02741 hypothetical protein; Provisional

Probab=99.82  E-value=2.2e-19  Score=156.25  Aligned_cols=131  Identities=24%  Similarity=0.284  Sum_probs=107.0

Q ss_pred             CcCCCCCCcHHHHHHHcCcHHHHHHHHhC------CCCccccCCCCCCcHHHHHHHcCc----HHHHHHHHHCCCCCCCC
Q psy903          150 HETTDEGESLLSLACSAGYYELAQVLLAM------HANVEDRGIKGECTPLMEAASSGF----IEIVRLLINHGADVNGQ  219 (739)
Q Consensus       150 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~------~~~~~~~~~~~~~t~L~~A~~~~~----~~~~~~Ll~~g~~~~~~  219 (739)
                      +.++..|.||||+|+..|+.++++.|+..      |++++..+.. |.||||+|+..|+    .+++++|+++|++++.+
T Consensus        15 ~~~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~-g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~   93 (169)
T PHA02741         15 AEKNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDA-GQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQ   93 (169)
T ss_pred             hccccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCC-CCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCC
Confidence            34677888999999999999998887542      4556555544 5689999988888    57888888889998888


Q ss_pred             CC-CCCcHHHHHHhcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903          220 SS-SGNTPLMYACAGGHEAVVRVLLE-CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG  281 (739)
Q Consensus       220 ~~-~~~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~  281 (739)
                      +. .|.||||+|+..++.+++++|++ .|++++..|.+|.|||++|+..++.+++++|++++..
T Consensus        94 ~~~~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~  157 (169)
T PHA02741         94 EMLEGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVAT  157 (169)
T ss_pred             CcCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHH
Confidence            75 88999999999999999999887 5888888888899999999999988999988887654

>PHA02741 hypothetical protein; Provisional

Probab=99.80  E-value=6.6e-19  Score=153.22  Aligned_cols=131  Identities=18%  Similarity=0.220  Sum_probs=118.5

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHh------cCCCCCcCCCCCCcHHHHHHHcCc----HHHHHHHHhCCCCccccCCC
Q psy903          119 PRPQNERSLVQACSDGDVKTVKKLLT------EGRSVHETTDEGESLLSLACSAGY----YELAQVLLAMHANVEDRGIK  188 (739)
Q Consensus       119 ~~~~~~~~l~~A~~~~~~~~~~~ll~------~~~~~~~~~~~g~t~L~~A~~~~~----~~~v~~Ll~~~~~~~~~~~~  188 (739)
                      ....+.|+||.|+..|+.++++.|+.      .|++++.+|..|.||||+|+..|+    .+++++|++.|++++..+..
T Consensus        17 ~~~~g~t~Lh~Aa~~g~~~~v~~l~~~~~~~~~ga~in~~d~~g~T~Lh~A~~~g~~~~~~~ii~~Ll~~gadin~~~~~   96 (169)
T PHA02741         17 KNSEGENFFHEAARCGCFDIIARFTPFIRGDCHAAALNATDDAGQMCIHIAAEKHEAQLAAEIIDHLIELGADINAQEML   96 (169)
T ss_pred             cccCCCCHHHHHHHcCCHHHHHHHHHHhccchhhhhhhccCCCCCcHHHHHHHcCChHHHHHHHHHHHHcCCCCCCCCcC
Confidence            34578999999999999999999864      357899999999999999999998    58999999999999887654


Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCC
Q psy903          189 GECTPLMEAASSGFIEIVRLLIN-HGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV  249 (739)
Q Consensus       189 ~~~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~  249 (739)
                      .|.||||+|+..++.+++++|++ .|++++..+..|.||||+|+..++.+++++|++.++..
T Consensus        97 ~g~TpLh~A~~~~~~~iv~~Ll~~~g~~~~~~n~~g~tpL~~A~~~~~~~iv~~L~~~~~~~  158 (169)
T PHA02741         97 EGDTALHLAAHRRDHDLAEWLCCQPGIDLHFCNADNKSPFELAIDNEDVAMMQILREIVATS  158 (169)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHhCCCCCCCcCCCCCCCHHHHHHHCCCHHHHHHHHHHHHHh
Confidence            67899999999999999999997 59999999999999999999999999999999876543

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.80  E-value=3.9e-19  Score=152.81  Aligned_cols=132  Identities=27%  Similarity=0.266  Sum_probs=99.0

Q ss_pred             CCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCC--Cc----cccCCCCCCcHHHHHHHcCcH---HHHHHHHHCCCCCCCC
Q psy903          149 VHETTDEGESLLSLACSAGYYELAQVLLAMHA--NV----EDRGIKGECTPLMEAASSGFI---EIVRLLINHGADVNGQ  219 (739)
Q Consensus       149 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~--~~----~~~~~~~~~t~L~~A~~~~~~---~~~~~Ll~~g~~~~~~  219 (739)
                      ++..|..|.||||+|+..|+.  ++++...+.  +.    ....+..|.||||+|+..|+.   +++++|+++|++++.+
T Consensus        10 ~~~~d~~g~tpLh~A~~~g~~--~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~   87 (154)
T PHA02736         10 ASEPDIEGENILHYLCRNGGV--TDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGK   87 (154)
T ss_pred             HHhcCCCCCCHHHHHHHhCCH--HHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCcccc
Confidence            344677788888888888873  333332221  11    112234567888888888876   4678888888888888


Q ss_pred             C-CCCCcHHHHHHhcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCC
Q psy903          220 S-SSGNTPLMYACAGGHEAVVRVLLE-CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGI  282 (739)
Q Consensus       220 ~-~~~~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~  282 (739)
                      + ..|.||||+|+..++.+++++|++ .|++++.++..|.||||+|+..|+.+++++|+++|++.
T Consensus        88 ~~~~g~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~  152 (154)
T PHA02736         88 ERVFGNTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQC  152 (154)
T ss_pred             CCCCCCcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCC
Confidence            7 488888888888888888888887 48888888888888888888888888888888887654

>KOG0512|consensus

Probab=99.79  E-value=2.5e-18  Score=136.08  Aligned_cols=146  Identities=26%  Similarity=0.279  Sum_probs=115.4

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhcCCC-CCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHc
Q psy903          122 QNERSLVQACSDGDVKTVKKLLTEGRS-VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS  200 (739)
Q Consensus       122 ~~~~~l~~A~~~~~~~~~~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~  200 (739)
                      .-...+.+|+..+.+..|+.|++..++ +|.+|.+|+||||.|+.+|+.++|+.|+..|++++.+.. .||||||-||..
T Consensus        62 dp~rl~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~-~GWTPLhSAckW  140 (228)
T KOG0512|consen   62 DPIRLLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTN-EGWTPLHSACKW  140 (228)
T ss_pred             CHHHHHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccc-cCccchhhhhcc
Confidence            334557788888888888888877654 788888888888888888888888888888888877664 458888888888


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcH-HHHHHHH-HCCCCCCCCCCCCCcHHHHHHhcCC
Q psy903          201 GFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE-AVVRVLL-ECGANVEDHNENGHTPLMEAASAGH  268 (739)
Q Consensus       201 ~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~-~~v~~Ll-~~~~~~~~~~~~~~t~L~~A~~~~~  268 (739)
                      ++.+++-.|+++|+|+|.......||||.||...+. ..+.+|+ +.+..+..++..+.||+.+|-+.+.
T Consensus       141 nN~~va~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~~  210 (228)
T KOG0512|consen  141 NNFEVAGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTSM  210 (228)
T ss_pred             cchhHHHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhhh
Confidence            888888888888888888888888888888876554 4555555 4567777777788888888876653

>KOG0512|consensus

Probab=99.79  E-value=2.9e-18  Score=135.72  Aligned_cols=143  Identities=30%  Similarity=0.323  Sum_probs=110.3

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHH
Q psy903          159 LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAV  238 (739)
Q Consensus       159 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~  238 (739)
                      .+.+|+..+++..|+.|++..++.....+..++||||-|+.+|+.+|++.|+..|++++.+...|+||||.||+.++.++
T Consensus        66 l~lwaae~nrl~eV~~lL~e~an~vNtrD~D~YTpLHRAaYn~h~div~~ll~~gAn~~a~T~~GWTPLhSAckWnN~~v  145 (228)
T KOG0512|consen   66 LLLWAAEKNRLTEVQRLLSEKANHVNTRDEDEYTPLHRAAYNGHLDIVHELLLSGANKEAKTNEGWTPLHSACKWNNFEV  145 (228)
T ss_pred             HHHHHHhhccHHHHHHHHHhccccccccccccccHHHHHHhcCchHHHHHHHHccCCcccccccCccchhhhhcccchhH
Confidence            56788888888888888888888777777778888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHCCCCCCCCCCCCCcHHHHHHhcCC-hHHHHHHHHcCCCCcccCcCccCCHHHHHHHcC
Q psy903          239 VRVLLECGANVEDHNENGHTPLMEAASAGH-VGVAKILLEYGAGINTHSNEFKESALTLACYKG  301 (739)
Q Consensus       239 v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~-~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~  301 (739)
                      +-.|+++|+|++.......||||.|+...+ ...+.+|+.....-.......+.+++.+|-+.+
T Consensus       146 a~~LLqhgaDVnA~t~g~ltpLhlaa~~rn~r~t~~~Ll~dryi~pg~~nn~eeta~~iARRT~  209 (228)
T KOG0512|consen  146 AGRLLQHGADVNAQTKGLLTPLHLAAGNRNSRDTLELLLHDRYIHPGLKNNLEETAFDIARRTS  209 (228)
T ss_pred             HHHHHhccCcccccccccchhhHHhhcccchHHHHHHHhhccccChhhhcCccchHHHHHHHhh
Confidence            888888888888888888888888887654 445555554322222223344667777766553

>KOG0195|consensus

Probab=99.77  E-value=4.6e-19  Score=152.55  Aligned_cols=136  Identities=35%  Similarity=0.521  Sum_probs=121.5

Q ss_pred             HHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHH
Q psy903          127 LVQACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEI  205 (739)
Q Consensus       127 l~~A~~~~~~~~~~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~  205 (739)
                      ++.-|+.|+.-.|+..++ ..-|.|.-|+.|.+|||||++.|+..+|+.|++.|+.++..+-- ..||||+|+.+|+-++
T Consensus         4 if~wcregna~qvrlwld~tehdln~gddhgfsplhwaakegh~aivemll~rgarvn~tnmg-ddtplhlaaahghrdi   82 (448)
T KOG0195|consen    4 IFGWCREGNAFQVRLWLDDTEHDLNVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMG-DDTPLHLAAAHGHRDI   82 (448)
T ss_pred             hhhhhhcCCeEEEEEEecCcccccccccccCcchhhhhhhcccHHHHHHHHhcccccccccCC-CCcchhhhhhcccHHH
Confidence            344566666555555554 35789999999999999999999999999999999999877643 3599999999999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903          206 VRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEA  263 (739)
Q Consensus       206 ~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A  263 (739)
                      |+.|+++.+|+|..++.|+|||||||..|.-.+.+-|+.+|+-++..+++|.|||..|
T Consensus        83 vqkll~~kadvnavnehgntplhyacfwgydqiaedli~~ga~v~icnk~g~tpldka  140 (448)
T KOG0195|consen   83 VQKLLSRKADVNAVNEHGNTPLHYACFWGYDQIAEDLISCGAAVNICNKKGMTPLDKA  140 (448)
T ss_pred             HHHHHHHhcccchhhccCCCchhhhhhhcHHHHHHHHHhccceeeecccCCCCchhhh
Confidence            9999999999999999999999999999999999999999999999999999999987

>PHA02736 Viral ankyrin protein; Provisional

Probab=99.76  E-value=4.8e-18  Score=146.00  Aligned_cols=132  Identities=20%  Similarity=0.260  Sum_probs=110.5

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHhcCCC-----CCcCCCCCCcHHHHHHHcCcH---HHHHHHHhCCCCccccCCCCC
Q psy903          119 PRPQNERSLVQACSDGDVKTVKKLLTEGRS-----VHETTDEGESLLSLACSAGYY---ELAQVLLAMHANVEDRGIKGE  190 (739)
Q Consensus       119 ~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~-----~~~~~~~g~t~L~~A~~~~~~---~~v~~Ll~~~~~~~~~~~~~~  190 (739)
                      +...+.||||+|++.|+...+........+     ++..|..|.||||+|+..|+.   +++++|++.|++++..+...|
T Consensus        13 ~d~~g~tpLh~A~~~g~~~~l~~~~~~~~~~~~~~~~~~d~~g~t~Lh~a~~~~~~~~~e~v~~Ll~~gadin~~~~~~g   92 (154)
T PHA02736         13 PDIEGENILHYLCRNGGVTDLLAFKNAISDENRYLVLEYNRHGKQCVHIVSNPDKADPQEKLKLLMEWGADINGKERVFG   92 (154)
T ss_pred             cCCCCCCHHHHHHHhCCHHHHHHHHHHhcchhHHHHHHhcCCCCEEEEeecccCchhHHHHHHHHHHcCCCccccCCCCC
Confidence            455689999999999984322222111112     334688999999999999987   468999999999998876567


Q ss_pred             CcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCC
Q psy903          191 CTPLMEAASSGFIEIVRLLIN-HGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE  250 (739)
Q Consensus       191 ~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~  250 (739)
                      .||||+|+..++.+++++|+. .|++++.++..|.||||+|+..|+.+++++|+++|++.+
T Consensus        93 ~T~Lh~A~~~~~~~i~~~Ll~~~g~d~n~~~~~g~tpL~~A~~~~~~~i~~~Ll~~ga~~~  153 (154)
T PHA02736         93 NTPLHIAVYTQNYELATWLCNQPGVNMEILNYAFKTPYYVACERHDAKMMNILRAKGAQCK  153 (154)
T ss_pred             CcHHHHHHHhCCHHHHHHHHhCCCCCCccccCCCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            899999999999999999998 599999999999999999999999999999999998764

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.73  E-value=3.2e-17  Score=126.00  Aligned_cols=89  Identities=42%  Similarity=0.618  Sum_probs=62.8

Q ss_pred             HHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHH
Q psy903          160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV  239 (739)
Q Consensus       160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v  239 (739)
                      ||+|++.|+.+++++|++.+.+++.     |.||||+|+..|+.+++++|+++|++++.+|..|+||||+|+.+|+.+++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~-----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~   75 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL-----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIV   75 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS-----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC-----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHH
Confidence            5677777777777777777666554     44777777777777777777777777777777777777777777777777


Q ss_pred             HHHHHCCCCCCCCC
Q psy903          240 RVLLECGANVEDHN  253 (739)
Q Consensus       240 ~~Ll~~~~~~~~~~  253 (739)
                      ++|+++|++++.+|
T Consensus        76 ~~Ll~~g~~~~~~n   89 (89)
T PF12796_consen   76 KLLLEHGADVNIRN   89 (89)
T ss_dssp             HHHHHTTT-TTSS-
T ss_pred             HHHHHcCCCCCCcC
Confidence            77777777776553

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG3676|consensus

Probab=99.73  E-value=5.2e-17  Score=161.91  Aligned_cols=209  Identities=32%  Similarity=0.301  Sum_probs=151.1

Q ss_pred             hhhhhhcCCHHHHHHHHHcC---------CCCcccCCCCCcHHHHHHh---cCcHHHHHHHHHccccccccCCCCCcchh
Q psy903            2 LVQACSDGDVKTVKKLLTEG---------RSVHETTDEGESLLSLACS---AGYYELAQVLLAMHANVEDRGIKGECTPL   69 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~~g---------~~~~~~~~~g~t~L~~A~~---~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l   69 (739)
                      ++.|+..|+++....++..+         .+++.+..-|.|.||.|..   .++.+++..|++.-..+-  ++..     
T Consensus       105 ~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~li--nd~~-----  177 (782)
T KOG3676|consen  105 LFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLI--NDIY-----  177 (782)
T ss_pred             hhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHh--hhhh-----
Confidence            45666677777777776654         4566667778888887776   345577777776433220  0000     


Q ss_pred             HHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC
Q psy903           70 MEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSV  149 (739)
Q Consensus        70 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~  149 (739)
                                                                     ......|.|+||.|+.+.+.++|++|++.|+|+
T Consensus       178 -----------------------------------------------~~eeY~GqSaLHiAIv~~~~~~V~lLl~~gADV  210 (782)
T KOG3676|consen  178 -----------------------------------------------TSEEYYGQSALHIAIVNRDAELVRLLLAAGADV  210 (782)
T ss_pred             -----------------------------------------------hhHhhcCcchHHHHHHhccHHHHHHHHHcCCch
Confidence                                                           011234567777777777888888888888887


Q ss_pred             CcCCCCCCcHHHHHHH--cCcHHHHHHHHhCCCCcccc-CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcH
Q psy903          150 HETTDEGESLLSLACS--AGYYELAQVLLAMHANVEDR-GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTP  226 (739)
Q Consensus       150 ~~~~~~g~t~L~~A~~--~~~~~~v~~Ll~~~~~~~~~-~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~  226 (739)
                      +.+-. |.  +..+-.  .++           ...+.. ...-|..||.+|+..++.|++++|+++|+|++.+|..|+|.
T Consensus       211 ~aRa~-G~--FF~~~dqk~~r-----------k~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl~~gAd~~aqDS~GNTV  276 (782)
T KOG3676|consen  211 HARAC-GA--FFCPDDQKASR-----------KSTNYTGYFYFGEYPLSFAACTNQPEIVRLLLAHGADPNAQDSNGNTV  276 (782)
T ss_pred             hhHhh-cc--ccCcccccccc-----------cccCCcceeeeccCchHHHHHcCCHHHHHHHHhcCCCCCccccCCChH
Confidence            76421 10  000000  000           011111 12346799999999999999999999999999999999999


Q ss_pred             HHHHHhcCcHHHHHHHHHCCCC--CCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          227 LMYACAGGHEAVVRVLLECGAN--VEDHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       227 L~~A~~~~~~~~v~~Ll~~~~~--~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                      ||..+..-..++.++++++|++  ...+|.+|.|||..|++.|..++.+.+++.
T Consensus       277 LH~lVi~~~~~My~~~L~~ga~~l~~v~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  277 LHMLVIHFVTEMYDLALELGANALEHVRNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             HHHHHHHHHHHHHHHHHhcCCCccccccccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            9999999999999999999999  888999999999999999999999999998

>KOG3676|consensus

Probab=99.70  E-value=1.4e-16  Score=158.83  Aligned_cols=189  Identities=30%  Similarity=0.347  Sum_probs=161.6

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcC---------CCCCcCCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCcc----ccC
Q psy903          123 NERSLVQACSDGDVKTVKKLLTEG---------RSVHETTDEGESLLSLACSA---GYYELAQVLLAMHANVE----DRG  186 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~~---------~~~~~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~----~~~  186 (739)
                      .+.++..|...+..+.++.++..+         .+++.+...|.|.||.|..+   ++-+++..|++.-+...    ..+
T Consensus       101 d~~~~~~~~~~~~l~~l~~l~~~~~~~k~r~~~w~~~~RGa~GET~Lh~~lL~~~~~~n~la~~LL~~~p~lind~~~~e  180 (782)
T KOG3676|consen  101 DRDALFIADSEGALSDLDGLLKFLRKSKYRLTDWKLNERGATGETLLHKALLNLSDGHNELARVLLEIFPKLINDIYTSE  180 (782)
T ss_pred             chhhhhhccccccHHHHhccchhhhhhhhhhhhhccccccchhhhHHHHHHhcCchhHHHHHHHHHHHhHHHhhhhhhhH
Confidence            346788899999999988888765         67888888999999999973   56689999998876432    234


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCC---------C--------------CCCCcHHHHHHhcCcHHHHHHHH
Q psy903          187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQ---------S--------------SSGNTPLMYACAGGHEAVVRVLL  243 (739)
Q Consensus       187 ~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~---------~--------------~~~~t~L~~A~~~~~~~~v~~Ll  243 (739)
                      ...|.||||+|+.+.+.++|++|++.|||++.+         |              ..|..||-+|+-.++.|++++|+
T Consensus       181 eY~GqSaLHiAIv~~~~~~V~lLl~~gADV~aRa~G~FF~~~dqk~~rk~T~Y~G~~YfGEyPLSfAAC~nq~eivrlLl  260 (782)
T KOG3676|consen  181 EYYGQSALHIAIVNRDAELVRLLLAAGADVHARACGAFFCPDDQKASRKSTNYTGYFYFGEYPLSFAACTNQPEIVRLLL  260 (782)
T ss_pred             hhcCcchHHHHHHhccHHHHHHHHHcCCchhhHhhccccCcccccccccccCCcceeeeccCchHHHHHcCCHHHHHHHH
Confidence            456789999999999999999999999998643         1              24678999999999999999999


Q ss_pred             HCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC--CcccCcCccCCHHHHHHHcCCHHHHHHHHHc
Q psy903          244 ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG--INTHSNEFKESALTLACYKGHLDMVRFLLSA  312 (739)
Q Consensus       244 ~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~--~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~  312 (739)
                      ++|+|++.+|..|+|.||..+..-..++..++++.|+.  ... .+..|-|||..|+.-|..++.+.+++.
T Consensus       261 ~~gAd~~aqDS~GNTVLH~lVi~~~~~My~~~L~~ga~~l~~v-~N~qgLTPLtLAaklGk~emf~~ile~  330 (782)
T KOG3676|consen  261 AHGADPNAQDSNGNTVLHMLVIHFVTEMYDLALELGANALEHV-RNNQGLTPLTLAAKLGKKEMFQHILER  330 (782)
T ss_pred             hcCCCCCccccCCChHHHHHHHHHHHHHHHHHHhcCCCccccc-cccCCCChHHHHHHhhhHHHHHHHHHh
Confidence            99999999999999999999999999999999999988  333 355688999999999999999999988

>PF12796 Ank_2: Ankyrin repeats (3 copies); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=99.69  E-value=2.7e-16  Score=120.88  Aligned_cols=87  Identities=44%  Similarity=0.712  Sum_probs=78.6

Q ss_pred             HHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHH
Q psy903          194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAK  273 (739)
Q Consensus       194 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~  273 (739)
                      ||+|++.|+.+++++|++.+.+++.    |.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|+.++++
T Consensus         1 L~~A~~~~~~~~~~~ll~~~~~~~~----~~~~l~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~   76 (89)
T PF12796_consen    1 LHIAAQNGNLEILKFLLEKGADINL----GNTALHYAAENGNLEIVKLLLENGADINSQDKNGNTALHYAAENGNLEIVK   76 (89)
T ss_dssp             HHHHHHTTTHHHHHHHHHTTSTTTS----SSBHHHHHHHTTTHHHHHHHHHTTTCTT-BSTTSSBHHHHHHHTTHHHHHH
T ss_pred             CHHHHHcCCHHHHHHHHHCcCCCCC----CCCHHHHHHHcCCHHHHHHHHHhcccccccCCCCCCHHHHHHHcCCHHHHH
Confidence            7899999999999999999888876    789999999999999999999999999999999999999999999999999


Q ss_pred             HHHHcCCCCcc
Q psy903          274 ILLEYGAGINT  284 (739)
Q Consensus       274 ~Ll~~~~~~~~  284 (739)
                      +|+++|++++.
T Consensus        77 ~Ll~~g~~~~~   87 (89)
T PF12796_consen   77 LLLEHGADVNI   87 (89)
T ss_dssp             HHHHTTT-TTS
T ss_pred             HHHHcCCCCCC
Confidence            99999988765

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; PDB: 3AAA_C 3F6Q_A 2KBX_A 3IXE_A 3TWR_D 3TWV_A 3TWT_B 3TWQ_A 3TWS_A 3TWX_B ....

>KOG0195|consensus

Probab=99.68  E-value=6.3e-17  Score=139.54  Aligned_cols=115  Identities=36%  Similarity=0.446  Sum_probs=98.7

Q ss_pred             ccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903          184 DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEA  263 (739)
Q Consensus       184 ~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A  263 (739)
                      ...+..|++|||+|++.|+..+++.|+.+|+.+|..+....||||.|+.+|+.++|+.|+++.+|+|..+..|.||||||
T Consensus        28 n~gddhgfsplhwaakegh~aivemll~rgarvn~tnmgddtplhlaaahghrdivqkll~~kadvnavnehgntplhya  107 (448)
T KOG0195|consen   28 NVGDDHGFSPLHWAAKEGHVAIVEMLLSRGARVNSTNMGDDTPLHLAAAHGHRDIVQKLLSRKADVNAVNEHGNTPLHYA  107 (448)
T ss_pred             ccccccCcchhhhhhhcccHHHHHHHHhcccccccccCCCCcchhhhhhcccHHHHHHHHHHhcccchhhccCCCchhhh
Confidence            34455668999999999999999999999999998888888999999999999999999999999999999999999999


Q ss_pred             HhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHH
Q psy903          264 ASAGHVGVAKILLEYGAGINTHSNEFKESALTLACY  299 (739)
Q Consensus       264 ~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~  299 (739)
                      |..|.-.+.+-|+..|+.++.+ +..|.+|+..|--
T Consensus       108 cfwgydqiaedli~~ga~v~ic-nk~g~tpldkakp  142 (448)
T KOG0195|consen  108 CFWGYDQIAEDLISCGAAVNIC-NKKGMTPLDKAKP  142 (448)
T ss_pred             hhhcHHHHHHHHHhccceeeec-ccCCCCchhhhch
Confidence            9999999999999998888775 4458888887643

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.65  E-value=4.1e-15  Score=124.43  Aligned_cols=122  Identities=43%  Similarity=0.663  Sum_probs=80.5

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHh
Q psy903          153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACA  232 (739)
Q Consensus       153 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~  232 (739)
                      +..|.||||+|+..++.+++++|++.+...+..+. .|.+|++.|+..++.+++++|++.|++++..+..+.||+|+|+.
T Consensus         4 ~~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~-~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~~~~~~~l~~a~~   82 (126)
T cd00204           4 DEDGRTPLHLAASNGHLEVVKLLLENGADVNAKDN-DGRTPLHLAAKNGHLEIVKLLLEKGADVNARDKDGNTPLHLAAR   82 (126)
T ss_pred             CcCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCC-CCCcHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHH
Confidence            45566677777777777777777766665533332 34467777777766677777776666666666666677777777


Q ss_pred             cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHH
Q psy903          233 GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL  275 (739)
Q Consensus       233 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~L  275 (739)
                      .++.+++++|++++.+.+..+..+.||++.|+..++.+++++|
T Consensus        83 ~~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~L  125 (126)
T cd00204          83 NGNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLL  125 (126)
T ss_pred             cCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHh
Confidence            7777777777766666666666666677776666666666665

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>cd00204 ANK ankyrin repeats; ankyrin repeats mediate protein-protein interactions in very diverse families of proteins

Probab=99.60  E-value=2.9e-14  Score=119.26  Aligned_cols=122  Identities=39%  Similarity=0.617  Sum_probs=113.9

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHc
Q psy903          121 PQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS  200 (739)
Q Consensus       121 ~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~  200 (739)
                      ..+.++|+.|+..++.+++++|++.+.+.+..+..|.+|||+|+..++.+++++|++.++.++..+ ..+.||+|.|+..
T Consensus         5 ~~g~t~l~~a~~~~~~~~i~~li~~~~~~~~~~~~g~~~l~~a~~~~~~~~~~~ll~~~~~~~~~~-~~~~~~l~~a~~~   83 (126)
T cd00204           5 EDGRTPLHLAASNGHLEVVKLLLENGADVNAKDNDGRTPLHLAAKNGHLEIVKLLLEKGADVNARD-KDGNTPLHLAARN   83 (126)
T ss_pred             cCCCCHHHHHHHcCcHHHHHHHHHcCCCCCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCccccC-CCCCCHHHHHHHc
Confidence            567899999999999999999999999989999999999999999999999999999998777666 4456999999999


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHH
Q psy903          201 GFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL  243 (739)
Q Consensus       201 ~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll  243 (739)
                      ++.+++++|+++|.+.+..+..+.||+++|+..++.+++++|+
T Consensus        84 ~~~~~~~~L~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~Ll  126 (126)
T cd00204          84 GNLDVVKLLLKHGADVNARDKDGRTPLHLAAKNGHLEVVKLLL  126 (126)
T ss_pred             CcHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcCCHHHHHHhC
Confidence            9999999999999999999999999999999999999999874

The number of ANK repeats in a protein can range from 2 to over 20 (ankyrins, for example). ANK repeats may occur in combinations with other types of domains. The structural repeat unit contains two antiparallel helices and a beta-hairpin, repeats are stacked in a superhelical arrangement; this alignment contains 4 consecutive repeats.

>KOG4214|consensus

Probab=99.56  E-value=3.7e-14  Score=99.41  Aligned_cols=94  Identities=31%  Similarity=0.426  Sum_probs=40.2

Q ss_pred             HHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHH
Q psy903          162 LACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV  241 (739)
Q Consensus       162 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~  241 (739)
                      |++++|.++-|+-....|.+++..-  +|++|||+|+-.|..+++++|+..|++++.+|+.|-|||-.|+..|+.++|++
T Consensus         8 W~vkNG~~DeVk~~v~~g~nVn~~~--ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKygITPLLsAvwEGH~~cVkl   85 (117)
T KOG4214|consen    8 WNVKNGEIDEVKQSVNEGLNVNEIY--GGRTPLHYAADYGQLSILEFLISIGANIQDKDKYGITPLLSAVWEGHRDCVKL   85 (117)
T ss_pred             hhhccCcHHHHHHHHHccccHHHHh--CCcccchHhhhcchHHHHHHHHHhccccCCccccCCcHHHHHHHHhhHHHHHH
Confidence            3444444444444444333332221  33344444444444444444444444444444444444444444444444444


Q ss_pred             HHHCCCCCCCCCCCCC
Q psy903          242 LLECGANVEDHNENGH  257 (739)
Q Consensus       242 Ll~~~~~~~~~~~~~~  257 (739)
                      |++.|++-.....+|.
T Consensus        86 LL~~GAdrt~~~PdG~  101 (117)
T KOG4214|consen   86 LLQNGADRTIHAPDGT  101 (117)
T ss_pred             HHHcCcccceeCCCch
Confidence            4444444443333333

>KOG4214|consensus

Probab=99.53  E-value=5.9e-14  Score=98.42  Aligned_cols=104  Identities=27%  Similarity=0.431  Sum_probs=93.5

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHH
Q psy903          125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIE  204 (739)
Q Consensus       125 ~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~  204 (739)
                      ..+.+++++|.++-|+..+..|.++|..- .|++|||+|+-.|+.+++++|+..|++++.++.. |.|||..|+..|+.+
T Consensus         4 ~~~~W~vkNG~~DeVk~~v~~g~nVn~~~-ggR~plhyAAD~GQl~ilefli~iGA~i~~kDKy-gITPLLsAvwEGH~~   81 (117)
T KOG4214|consen    4 MSVAWNVKNGEIDEVKQSVNEGLNVNEIY-GGRTPLHYAADYGQLSILEFLISIGANIQDKDKY-GITPLLSAVWEGHRD   81 (117)
T ss_pred             hhHhhhhccCcHHHHHHHHHccccHHHHh-CCcccchHhhhcchHHHHHHHHHhccccCCcccc-CCcHHHHHHHHhhHH
Confidence            45788999999999999999998888765 7999999999999999999999999999988755 579999999999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903          205 IVRLLINHGADVNGQSSSGNTPLMYA  230 (739)
Q Consensus       205 ~~~~Ll~~g~~~~~~~~~~~t~L~~A  230 (739)
                      +|++|++.|++-.....+|.+.+..+
T Consensus        82 cVklLL~~GAdrt~~~PdG~~~~eat  107 (117)
T KOG4214|consen   82 CVKLLLQNGADRTIHAPDGTALIEAT  107 (117)
T ss_pred             HHHHHHHcCcccceeCCCchhHHhhc
Confidence            99999999999888888887765543

>KOG1710|consensus

Probab=99.51  E-value=1.5e-13  Score=118.95  Aligned_cols=122  Identities=31%  Similarity=0.401  Sum_probs=115.5

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903          123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF  202 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~  202 (739)
                      ...+|..++..|+.+-...|+..-..+|..|..|.|+|..|+..|+.++|++|++.|+++|......++||||+|+.+|+
T Consensus        12 ~~~~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSGn   91 (396)
T KOG1710|consen   12 PKSPLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSGN   91 (396)
T ss_pred             hhhHHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcCC
Confidence            35789999999999999999998777999999999999999999999999999999999999998889999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH
Q psy903          203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE  244 (739)
Q Consensus       203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~  244 (739)
                      .++.++|++.|+.....+.-|+|+-..|+.-|+.++|..+-+
T Consensus        92 ~dvcrllldaGa~~~~vNsvgrTAaqmAAFVG~H~CV~iINN  133 (396)
T KOG1710|consen   92 QDVCRLLLDAGARMYLVNSVGRTAAQMAAFVGHHECVAIINN  133 (396)
T ss_pred             chHHHHHHhccCccccccchhhhHHHHHHHhcchHHHHHHhc
Confidence            999999999999999999999999999999999999988753

>KOG1710|consensus

Probab=99.49  E-value=1.3e-13  Score=119.40  Aligned_cols=119  Identities=28%  Similarity=0.357  Sum_probs=106.1

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      ||+.|+..||.+....||+.-..+|.+|..|+|+|..|+..|+.++|++|++.|+|+|......++||||.|+.+|    
T Consensus        15 ~Lle~i~Kndt~~a~~LLs~vr~vn~~D~sGMs~LahAaykGnl~~v~lll~~gaDvN~~qhg~~YTpLmFAALSG----   90 (396)
T KOG1710|consen   15 PLLEAIDKNDTEAALALLSTVRQVNQRDPSGMSVLAHAAYKGNLTLVELLLELGADVNDKQHGTLYTPLMFAALSG----   90 (396)
T ss_pred             HHHHHHccCcHHHHHHHHHHhhhhhccCCCcccHHHHHHhcCcHHHHHHHHHhCCCcCcccccccccHHHHHHHcC----
Confidence            6899999999999999999756689999999999999999999999999999999999887777777777777655    


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL  160 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L  160 (739)
                                                                            +.++.+.|++.|+.....+.-|+|+-
T Consensus        91 ------------------------------------------------------n~dvcrllldaGa~~~~vNsvgrTAa  116 (396)
T KOG1710|consen   91 ------------------------------------------------------NQDVCRLLLDAGARMYLVNSVGRTAA  116 (396)
T ss_pred             ------------------------------------------------------CchHHHHHHhccCccccccchhhhHH
Confidence                                                                  77888999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHh
Q psy903          161 SLACSAGYYELAQVLLA  177 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~  177 (739)
                      ..|+.-|+.++|..+-.
T Consensus       117 qmAAFVG~H~CV~iINN  133 (396)
T KOG1710|consen  117 QMAAFVGHHECVAIINN  133 (396)
T ss_pred             HHHHHhcchHHHHHHhc
Confidence            99999999998877643

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.44  E-value=8.2e-14  Score=94.27  Aligned_cols=55  Identities=31%  Similarity=0.416  Sum_probs=33.3

Q ss_pred             HHHcC-CCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHH
Q psy903           17 LLTEG-RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEA   72 (739)
Q Consensus        17 ll~~g-~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a   72 (739)
                      ||+.| ++++..|..|+||||+|+.+|+.++|++|++.|++++.+|..|. ||+|+|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~-Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQ-TPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS---HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCC-CHHHhC
Confidence            57777 89999999999999999999999999999999999999999886 999987

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.42  E-value=7.4e-12  Score=118.00  Aligned_cols=123  Identities=37%  Similarity=0.460  Sum_probs=65.3

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCc-----HHHHHHHHhCCC--CccccCCCCCCcHHH
Q psy903          123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY-----YELAQVLLAMHA--NVEDRGIKGECTPLM  195 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~-----~~~v~~Ll~~~~--~~~~~~~~~~~t~L~  195 (739)
                      ..++++.++..++.++++++++.|++++..+..|.||||+|+..++     .+++++|++.|+  +........|.||||
T Consensus        73 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~g~tpl~  152 (235)
T COG0666          73 GRLPLHSAASKGDDKIVKLLLASGADVNAKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDEDGNTPLH  152 (235)
T ss_pred             ccCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCCCCchhH
Confidence            4555555555566555555555555555555556666666665555     555555555555  333333333445555


Q ss_pred             HHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHC
Q psy903          196 EAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC  245 (739)
Q Consensus       196 ~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~  245 (739)
                      +|+..|+.++++.|++.|++++.++..|.|+++.|+..++.++++.+++.
T Consensus       153 ~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~  202 (235)
T COG0666         153 WAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDK  202 (235)
T ss_pred             HHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhc
Confidence            55555555555555555555555555555555555555555555555443

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.39  E-value=9.3e-13  Score=88.94  Aligned_cols=53  Identities=53%  Similarity=0.807  Sum_probs=31.8

Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHH
Q psy903          191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL  243 (739)
Q Consensus       191 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll  243 (739)
                      .||||+|+..|+.+++++|+++|.+++.+|.+|.||||+|+..|+.+++++|+
T Consensus         2 ~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    2 RTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             ChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            46666666666666666666666666666666666666666666666666664

...

>COG0666 Arp FOG: Ankyrin repeat [General function prediction only]

Probab=99.39  E-value=7.5e-12  Score=117.94  Aligned_cols=128  Identities=37%  Similarity=0.486  Sum_probs=92.6

Q ss_pred             cCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc-----HHHHHHHHHCCC---CCCCCCCC
Q psy903          151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF-----IEIVRLLINHGA---DVNGQSSS  222 (739)
Q Consensus       151 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~-----~~~~~~Ll~~g~---~~~~~~~~  222 (739)
                      ..+..+.++++.++..+..+++++++..+.+++ .....|.||||+|+..++     .++++.|++.|+   ..+.++..
T Consensus        68 ~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~-~~~~~g~t~l~~a~~~~~~~~~~~~~~~~ll~~g~~~~~~~~~~~~  146 (235)
T COG0666          68 ARDLDGRLPLHSAASKGDDKIVKLLLASGADVN-AKDADGDTPLHLAALNGNPPEGNIEVAKLLLEAGADLDVNNLRDED  146 (235)
T ss_pred             cCCccccCHHHHHHHcCcHHHHHHHHHcCCCcc-cccCCCCcHHHHHHhcCCcccchHHHHHHHHHcCCCCCCccccCCC
Confidence            344556677777777777777777777777773 333445677777777777     777777777777   45555777


Q ss_pred             CCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcC
Q psy903          223 GNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG  279 (739)
Q Consensus       223 ~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~  279 (739)
                      |.||||+|+..|+.+++++|++.|++++..+..|.|+++.|+..++.++++.+++.+
T Consensus       147 g~tpl~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~l~~~~  203 (235)
T COG0666         147 GNTPLHWAALNGDADIVELLLEAGADPNSRNSYGVTALDPAAKNGRIELVKLLLDKG  203 (235)
T ss_pred             CCchhHHHHHcCchHHHHHHHhcCCCCcccccCCCcchhhhcccchHHHHHHHHhcC
Confidence            777777777777777777777777777777777777777777777777777777764

>PF13637 Ank_4: Ankyrin repeats (many copies); PDB: 3B95_A 3B7B_A 3F6Q_A 2KBX_A 3IXE_A 2DWZ_C 2DVW_A 3AJI_A 1S70_B 2HE0_A

Probab=99.37  E-value=1.5e-12  Score=87.92  Aligned_cols=54  Identities=44%  Similarity=0.765  Sum_probs=46.1

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHH
Q psy903          529 ASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLL  582 (739)
Q Consensus       529 ~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll  582 (739)
                      |.||||.|++.|+.+++++|+++|.+++.+|.+|.||||+|+..|+.+++++|+
T Consensus         1 g~t~lh~A~~~g~~~~~~~Ll~~~~din~~d~~g~t~lh~A~~~g~~~~~~~Ll   54 (54)
T PF13637_consen    1 GRTPLHWAARSGNLEIVKLLLEHGADINAQDEDGRTPLHYAAKNGNIDIVKFLL   54 (54)
T ss_dssp             SSBHHHHHHHTT-HHHHHHHHHTTSGTT-B-TTS--HHHHHHHTT-HHHHHHHH
T ss_pred             CChHHHHHHHhCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHccCHHHHHHHC
Confidence            679999999999999999999999999999999999999999999999999986

...

>PF13857 Ank_5: Ankyrin repeats (many copies); PDB: 1SW6_A 3EHR_B 3EHQ_A

Probab=99.37  E-value=6.1e-13  Score=90.02  Aligned_cols=55  Identities=51%  Similarity=0.803  Sum_probs=30.3

Q ss_pred             HHHCC-CCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903          209 LINHG-ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEA  263 (739)
Q Consensus       209 Ll~~g-~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A  263 (739)
                      |+++| .+++.+|..|.||||+|+.+|+.+++++|++.|++++.+|..|+|||++|
T Consensus         1 LL~~~~~~~n~~d~~G~T~LH~A~~~g~~~~v~~Ll~~g~d~~~~d~~G~Tpl~~A   56 (56)
T PF13857_consen    1 LLEHGPADVNAQDKYGNTPLHWAARYGHSEVVRLLLQNGADPNAKDKDGQTPLHYA   56 (56)
T ss_dssp             -----T--TT---TTS--HHHHHHHHT-HHHHHHHHHCT--TT---TTS--HHHH-
T ss_pred             CCccCcCCCcCcCCCCCcHHHHHHHcCcHHHHHHHHHCcCCCCCCcCCCCCHHHhC
Confidence            56667 78888888888999999998899999998888888888888888988876

>KOG0515|consensus

Probab=99.35  E-value=2.7e-12  Score=120.89  Aligned_cols=74  Identities=34%  Similarity=0.474  Sum_probs=58.8

Q ss_pred             hhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcc
Q psy903            2 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG   76 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~   76 (739)
                      |..|+..|.+|+|+..+.+=-|+-..+++|-|+||-|+..||++||++||+.|+++|+.|.+|. ||||+|+..+
T Consensus       554 LLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGW-TPLHCAASCN  627 (752)
T KOG0515|consen  554 LLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGW-TPLHCAASCN  627 (752)
T ss_pred             HHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCC-chhhhhhhcC
Confidence            5678888888888888887677777788888888888888888888888888888888776664 7777766554

>KOG0515|consensus

Probab=99.32  E-value=7.1e-12  Score=118.17  Aligned_cols=119  Identities=31%  Similarity=0.397  Sum_probs=100.0

Q ss_pred             HHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHH
Q psy903          193 PLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA  272 (739)
Q Consensus       193 ~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii  272 (739)
                      .|..|+..|.+|+|+..+..--|+...+..|-|+||.|+-.|+.+||++|++.|+++|..|.+|+||||.|+.+++..++
T Consensus       553 LLLDaaLeGEldlVq~~i~ev~DpSqpNdEGITaLHNAiCaghyeIVkFLi~~ganVNa~DSdGWTPLHCAASCNnv~~c  632 (752)
T KOG0515|consen  553 LLLDAALEGELDLVQRIIYEVTDPSQPNDEGITALHNAICAGHYEIVKFLIEFGANVNAADSDGWTPLHCAASCNNVPMC  632 (752)
T ss_pred             HHHhhhhcchHHHHHHHHHhhcCCCCCCccchhHHhhhhhcchhHHHHHHHhcCCcccCccCCCCchhhhhhhcCchHHH
Confidence            34557888999999999888888888888999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHcCCCCcccCcCccCCHHHHHH--HcCCHHHHHHHHH
Q psy903          273 KILLEYGAGINTHSNEFKESALTLAC--YKGHLDMVRFLLS  311 (739)
Q Consensus       273 ~~Ll~~~~~~~~~~~~~~~~~l~~A~--~~~~~~~v~~Ll~  311 (739)
                      +.|++.|+.+...+-..+.|+...+-  +.|...+.+||..
T Consensus       633 kqLVe~GaavfAsTlSDmeTa~eKCee~eeGY~~CsqyL~~  673 (752)
T KOG0515|consen  633 KQLVESGAAVFASTLSDMETAAEKCEEMEEGYDQCSQYLYG  673 (752)
T ss_pred             HHHHhccceEEeeecccccchhhhcchhhhhHHHHHHHHHH
Confidence            99999998887777666777777654  3566777777754

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.25  E-value=3.5e-11  Score=128.07  Aligned_cols=102  Identities=31%  Similarity=0.419  Sum_probs=57.2

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHH
Q psy903          159 LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAV  238 (739)
Q Consensus       159 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~  238 (739)
                      .|+.|+..|+.+.++.|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.++
T Consensus        85 ~L~~aa~~G~~~~vk~LL~~Gadin~~d~~-G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~G~TpLh~A~~~g~~~i  163 (664)
T PTZ00322         85 ELCQLAASGDAVGARILLTGGADPNCRDYD-GRTPLHIACANGHVQVVRVLLEFGADPTLLDKDGKTPLELAEENGFREV  163 (664)
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCCcCCC-CCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCcHHH
Confidence            355555556666666666555555544332 3466666666666666666666565555555555666666666555666


Q ss_pred             HHHHHHC-------CCCCCCCCCCCCcHHH
Q psy903          239 VRVLLEC-------GANVEDHNENGHTPLM  261 (739)
Q Consensus       239 v~~Ll~~-------~~~~~~~~~~~~t~L~  261 (739)
                      +++|+++       |++.+..+..|.+|+.
T Consensus       164 v~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~  193 (664)
T PTZ00322        164 VQLLSRHSQCHFELGANAKPDSFTGKPPSL  193 (664)
T ss_pred             HHHHHhCCCcccccCCCCCccccCCCCccc
Confidence            6665555       4555444444554443

>PTZ00322 6-phosphofructo-2-kinase/fructose-2,6-biphosphatase; Provisional

Probab=99.23  E-value=4.9e-11  Score=126.97  Aligned_cols=105  Identities=31%  Similarity=0.444  Sum_probs=85.0

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHH
Q psy903          125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIE  204 (739)
Q Consensus       125 ~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~  204 (739)
                      ..|+.|+..|+.+.++.|++.|++++..|..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+
T Consensus        84 ~~L~~aa~~G~~~~vk~LL~~Gadin~~d~~G~TpLh~Aa~~g~~eiv~~LL~~Gadvn~~d~~-G~TpLh~A~~~g~~~  162 (664)
T PTZ00322         84 VELCQLAASGDAVGARILLTGGADPNCRDYDGRTPLHIACANGHVQVVRVLLEFGADPTLLDKD-GKTPLELAEENGFRE  162 (664)
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCcHHHHHHHCCCHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHCCcHH
Confidence            4577888888888888888888888888888888888888888888888888888888766644 458888888888888


Q ss_pred             HHHHHHHC-------CCCCCCCCCCCCcHHHHH
Q psy903          205 IVRLLINH-------GADVNGQSSSGNTPLMYA  230 (739)
Q Consensus       205 ~~~~Ll~~-------g~~~~~~~~~~~t~L~~A  230 (739)
                      ++++|+++       |++++..+..|.+|+..+
T Consensus       163 iv~~Ll~~~~~~~~~ga~~~~~~~~g~~~~~~~  195 (664)
T PTZ00322        163 VVQLLSRHSQCHFELGANAKPDSFTGKPPSLED  195 (664)
T ss_pred             HHHHHHhCCCcccccCCCCCccccCCCCccchh
Confidence            88888887       777777777777775544

>PF13606 Ank_3: Ankyrin repeat

Probab=99.01  E-value=3.9e-10  Score=63.93  Aligned_cols=29  Identities=38%  Similarity=0.527  Sum_probs=27.7

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHHHcccccc
Q psy903           30 EGESLLSLACSAGYYELAQVLLAMHANVE   58 (739)
Q Consensus        30 ~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~   58 (739)
                      +|+||||+||..|+.|+|++|+++|++++
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn   29 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVN   29 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCC
Confidence            58999999999999999999999999986

>PF13606 Ank_3: Ankyrin repeat

Probab=99.00  E-value=5.8e-10  Score=63.26  Aligned_cols=30  Identities=33%  Similarity=0.615  Sum_probs=28.3

Q ss_pred             CCchHHHHHHHcCcHHHHHHHHHcCCCCCC
Q psy903          708 TGDTALTYACENGHTDVADLLLSYGANLRN  737 (739)
Q Consensus       708 ~g~t~l~~A~~~~~~~i~~~L~~~ga~~~~  737 (739)
                      .|.||||+|+..|+.+++++|+++|||+|.
T Consensus         1 ~G~T~Lh~A~~~g~~e~v~~Ll~~gadvn~   30 (30)
T PF13606_consen    1 NGNTPLHLAASNGNIEIVKYLLEHGADVNA   30 (30)
T ss_pred             CCCCHHHHHHHhCCHHHHHHHHHcCCCCCC
Confidence            489999999999999999999999999984

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.87  E-value=2.9e-09  Score=62.77  Aligned_cols=32  Identities=25%  Similarity=0.458  Sum_probs=30.3

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHHHccccccccC
Q psy903           30 EGESLLSLACSAGYYELAQVLLAMHANVEDRG   61 (739)
Q Consensus        30 ~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~   61 (739)
                      +|+||||+|+..|+.+++++|+++|++++.+|
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            58999999999999999999999999998876

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>PF00023 Ank: Ankyrin repeat Hereditary spherocytosis; InterPro: IPR002110 The ankyrin repeat is one of the most common protein-protein interaction motifs in nature

Probab=98.84  E-value=4.9e-09  Score=61.82  Aligned_cols=32  Identities=44%  Similarity=0.809  Sum_probs=30.1

Q ss_pred             CCchHHHHHHHcCcHHHHHHHHHcCCCCCCCC
Q psy903          708 TGDTALTYACENGHTDVADLLLSYGANLRNRT  739 (739)
Q Consensus       708 ~g~t~l~~A~~~~~~~i~~~L~~~ga~~~~~~  739 (739)
                      +|.||||+|+..|+.+++++|+++||+++.++
T Consensus         1 dG~TpLh~A~~~~~~~~v~~Ll~~ga~~~~~d   32 (33)
T PF00023_consen    1 DGNTPLHYAAQRGHPDIVKLLLKHGADINARD   32 (33)
T ss_dssp             TSBBHHHHHHHTTCHHHHHHHHHTTSCTTCBC
T ss_pred             CcccHHHHHHHHHHHHHHHHHHHCcCCCCCCC
Confidence            48999999999999999999999999999864

Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].; GO: 0005515 protein binding; PDB: 1D9S_A 1NFI_F 1IKN_D 1WDY_A 1OT8_C 1QYM_A 1TR4_A 1UOH_A 1N11_A 1K1A_A ....

>KOG0511|consensus

Probab=98.67  E-value=1e-07  Score=86.78  Aligned_cols=72  Identities=28%  Similarity=0.308  Sum_probs=62.5

Q ss_pred             hhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhc
Q psy903            2 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS   75 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~   75 (739)
                      |+.|++.||.|.|++|++-|.++|++|....+||.+|+..||.++|++|+++||=+. ++...| .-.|+++.+
T Consensus        40 lceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~-rdtf~G-~RC~YgaLn  111 (516)
T KOG0511|consen   40 LCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICS-RDTFDG-DRCHYGALN  111 (516)
T ss_pred             HHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCccc-ccccCc-chhhhhhhh
Confidence            799999999999999999999999999999999999999999999999999999875 443344 445555544

>KOG0783|consensus

Probab=98.67  E-value=2.2e-08  Score=100.65  Aligned_cols=100  Identities=19%  Similarity=0.222  Sum_probs=88.1

Q ss_pred             CCHHHHHHHHhcC--CCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHH
Q psy903          134 GDVKTVKKLLTEG--RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLIN  211 (739)
Q Consensus       134 ~~~~~~~~ll~~~--~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~  211 (739)
                      +....++-+++..  --.+..|..|+|+||+|+..+..+++++|+++|+++...+...|+||||-|+..|+.|++-.|+.
T Consensus        28 s~~Nqlk~F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~  107 (1267)
T KOG0783|consen   28 SEPNQLKGFSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLS  107 (1267)
T ss_pred             CChhHHHHHHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHh
Confidence            3343455555442  12778899999999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCCCcHHHHHHhc
Q psy903          212 HGADVNGQSSSGNTPLMYACAG  233 (739)
Q Consensus       212 ~g~~~~~~~~~~~t~L~~A~~~  233 (739)
                      +|+.+..+|..|.+||.+-++.
T Consensus       108 ~g~SL~i~Dkeglsplq~~~r~  129 (1267)
T KOG0783|consen  108 KGRSLRIKDKEGLSPLQFLSRV  129 (1267)
T ss_pred             cCCceEEecccCCCHHHHHhhc
Confidence            9999999999999999988773

>KOG0782|consensus

Probab=98.67  E-value=1.2e-07  Score=90.99  Aligned_cols=120  Identities=23%  Similarity=0.246  Sum_probs=92.9

Q ss_pred             hhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccc
Q psy903            2 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLA   81 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~   81 (739)
                      +..|+..+|+=.++.....|-++-.++.+..|.||+|+..|+-|||+||+++|..          ..|.+|-.       
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~----------elld~~de-------  932 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPS----------ELLDMADE-------  932 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCH----------HHHHHHhh-------
Confidence            5678888888888888888888888888888999999999999999999998864          11222211       


Q ss_pred             cCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHH
Q psy903           82 TGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS  161 (739)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~  161 (739)
                                                              .+.|+||.|+-.++..+.++|++.|+.+...|..|.||-.
T Consensus       933 ----------------------------------------~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~e  972 (1004)
T KOG0782|consen  933 ----------------------------------------TGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQE  972 (1004)
T ss_pred             ----------------------------------------hhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHH
Confidence                                                    1345566666666778888888888888888888888888


Q ss_pred             HHHHcCcHHHHHHHHhC
Q psy903          162 LACSAGYYELAQVLLAM  178 (739)
Q Consensus       162 ~A~~~~~~~~v~~Ll~~  178 (739)
                      .|-+.|+.++..||-+.
T Consensus       973 raqqa~d~dlaayle~r  989 (1004)
T KOG0782|consen  973 RAQQAGDPDLAAYLESR  989 (1004)
T ss_pred             HHHhcCCchHHHHHhhh
Confidence            88888888888888654

>KOG0782|consensus

Probab=98.64  E-value=1.3e-07  Score=90.75  Aligned_cols=119  Identities=24%  Similarity=0.325  Sum_probs=66.6

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHH
Q psy903          127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIV  206 (739)
Q Consensus       127 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~  206 (739)
                      |..|+..+++--++..-.+|-++-.++.+..+.||+|+..|+-++|+|++++|+.-.                       
T Consensus       870 il~av~~~D~~klqE~h~~gg~ll~~~~~~~sllh~a~~tg~~eivkyildh~p~el-----------------------  926 (1004)
T KOG0782|consen  870 ILRAVLSSDLMKLQETHLNGGSLLIQGPDHCSLLHYAAKTGNGEIVKYILDHGPSEL-----------------------  926 (1004)
T ss_pred             HHHHHHhccHHHHHHHHhcCCceEeeCcchhhHHHHHHhcCChHHHHHHHhcCCHHH-----------------------
Confidence            555666666555555555566666666666666666666666666666666654311                       


Q ss_pred             HHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903          207 RLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE  277 (739)
Q Consensus       207 ~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~  277 (739)
                               ++..|..|.|+||.|+..++..++++|++.|+.+...|..|.||-..|-+.|+.++..||-.
T Consensus       927 ---------ld~~de~get~lhkaa~~~~r~vc~~lvdagasl~ktd~kg~tp~eraqqa~d~dlaayle~  988 (1004)
T KOG0782|consen  927 ---------LDMADETGETALHKAACQRNRAVCQLLVDAGASLRKTDSKGKTPQERAQQAGDPDLAAYLES  988 (1004)
T ss_pred             ---------HHHHhhhhhHHHHHHHHhcchHHHHHHHhcchhheecccCCCChHHHHHhcCCchHHHHHhh
Confidence                     12234445555555555555555555555555555555555555555555555555555543

>KOG0506|consensus

Probab=98.63  E-value=3.5e-08  Score=92.60  Aligned_cols=84  Identities=21%  Similarity=0.386  Sum_probs=76.0

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHc-cccccccCCCCCcchhHHHhhccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLMEAASSGFGK   79 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~t~l~~a~~~~~~~   79 (739)
                      +++.|++.||+..++.+.-.|.|++..|++.||+||.|+..|+.+++++|++. +.+++..|-.++ |||.-|...+   
T Consensus       509 ~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~r-tPlDdA~~F~---  584 (622)
T KOG0506|consen  509 NVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGR-TPLDDAKHFK---  584 (622)
T ss_pred             hhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCC-CcchHhHhcC---
Confidence            47899999999999999999999999999999999999999999999999985 778888887777 9999999998   


Q ss_pred             cccCCCCCCCHHHHHhhh
Q psy903           80 LATGDGKLADPEVLRRLT   97 (739)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~   97 (739)
                               +.++.+.+.
T Consensus       585 ---------h~~v~k~L~  593 (622)
T KOG0506|consen  585 ---------HKEVVKLLE  593 (622)
T ss_pred             ---------cHHHHHHHH
Confidence                     666666654

>KOG0783|consensus

Probab=98.62  E-value=2.5e-08  Score=100.19  Aligned_cols=92  Identities=26%  Similarity=0.228  Sum_probs=79.8

Q ss_pred             HHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHhcCcHHHHHHHHHCCCCCCCC
Q psy903          174 VLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSS-SGNTPLMYACAGGHEAVVRVLLECGANVEDH  252 (739)
Q Consensus       174 ~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~  252 (739)
                      ++-+.+-+.....+..|+++||+|+..+..++++||+++|++++.+|. .|.||||.|+.+|++|++-.|+.+|+....+
T Consensus        36 F~~k~c~n~anikD~~GR~alH~~~S~~k~~~l~wLlqhGidv~vqD~ESG~taLHRaiyyG~idca~lLL~~g~SL~i~  115 (1267)
T KOG0783|consen   36 FSEKSCQNLANIKDRYGRTALHIAVSENKNSFLRWLLQHGIDVFVQDEESGYTALHRAIYYGNIDCASLLLSKGRSLRIK  115 (1267)
T ss_pred             HHHHhhhhhhhHHHhhccceeeeeeccchhHHHHHHHhcCceeeeccccccchHhhHhhhhchHHHHHHHHhcCCceEEe
Confidence            333444344444455678999999999999999999999999998885 7999999999999999999999999999999


Q ss_pred             CCCCCcHHHHHHh
Q psy903          253 NENGHTPLMEAAS  265 (739)
Q Consensus       253 ~~~~~t~L~~A~~  265 (739)
                      |++|.+||...++
T Consensus       116 Dkeglsplq~~~r  128 (1267)
T KOG0783|consen  116 DKEGLSPLQFLSR  128 (1267)
T ss_pred             cccCCCHHHHHhh
Confidence            9999999998877

>KOG0506|consensus

Probab=98.61  E-value=4.7e-08  Score=91.75  Aligned_cols=90  Identities=31%  Similarity=0.421  Sum_probs=81.8

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCC
Q psy903          190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE-CGANVEDHNENGHTPLMEAASAGH  268 (739)
Q Consensus       190 ~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~t~L~~A~~~~~  268 (739)
                      +..++++|+..|+...++.+.-.|.|.+.+|.+.+|+||.|+..|+.+++++|++ .+.+++.+|..|+|||.-|...++
T Consensus       506 ~~i~~~~aa~~GD~~alrRf~l~g~D~~~~DyD~RTaLHvAAaEG~v~v~kfl~~~~kv~~~~kDRw~rtPlDdA~~F~h  585 (622)
T KOG0506|consen  506 TVINVMYAAKNGDLSALRRFALQGMDLETKDYDDRTALHVAAAEGHVEVVKFLLNACKVDPDPKDRWGRTPLDDAKHFKH  585 (622)
T ss_pred             chhhhhhhhhcCCHHHHHHHHHhcccccccccccchhheeecccCceeHHHHHHHHHcCCCChhhccCCCcchHhHhcCc
Confidence            3578999999999999999998999999999999999999999999999999997 478899999999999999999999


Q ss_pred             hHHHHHHHHcC
Q psy903          269 VGVAKILLEYG  279 (739)
Q Consensus       269 ~~ii~~Ll~~~  279 (739)
                      .+++++|-+.-
T Consensus       586 ~~v~k~L~~~~  596 (622)
T KOG0506|consen  586 KEVVKLLEEAQ  596 (622)
T ss_pred             HHHHHHHHHHh
Confidence            99999998753

>KOG0818|consensus

Probab=98.60  E-value=2.1e-07  Score=87.97  Aligned_cols=94  Identities=34%  Similarity=0.373  Sum_probs=78.7

Q ss_pred             cCCCCCCc------HHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCC
Q psy903          151 ETTDEGES------LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGN  224 (739)
Q Consensus       151 ~~~~~g~t------~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~  224 (739)
                      .+|++|.+      -||..++.|+.+..-.|+..|++++......|.||||.|++.|..--+++|.-+|+|+...|..|+
T Consensus       122 ~rDdD~~~~~~LsrQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~Gm  201 (669)
T KOG0818|consen  122 CRDDDSVTAKDLSKQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGM  201 (669)
T ss_pred             CCCcchhhHHHHHHHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCC
Confidence            34555543      488888888999888888899998888888888999999999998888888889999999999999


Q ss_pred             cHHHHHHhcCcHHHHHHHHH
Q psy903          225 TPLMYACAGGHEAVVRVLLE  244 (739)
Q Consensus       225 t~L~~A~~~~~~~~v~~Ll~  244 (739)
                      ||+.+|-..|+-++.+-|++
T Consensus       202 tP~~~AR~~gH~~laeRl~e  221 (669)
T KOG0818|consen  202 TPVDYARQGGHHELAERLVE  221 (669)
T ss_pred             cHHHHHHhcCchHHHHHHHH
Confidence            99999988888877777765

>KOG0818|consensus

Probab=98.59  E-value=2.6e-07  Score=87.34  Aligned_cols=87  Identities=30%  Similarity=0.387  Sum_probs=81.6

Q ss_pred             cHHHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChH
Q psy903          192 TPLMEAASSGFIEIVRLLINHGADVNGQS-SSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVG  270 (739)
Q Consensus       192 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~  270 (739)
                      .-||..++.|+.++.-.|+..|+++|..+ ..|.||||.|++.|+.--+++|+=+|+|+...|..|.||+.+|-..|+-+
T Consensus       135 rQLhasvRt~nlet~LRll~lGA~~N~~hpekg~TpLHvAAk~Gq~~Q~ElL~vYGAD~~a~d~~GmtP~~~AR~~gH~~  214 (669)
T KOG0818|consen  135 KQLHSSVRTGNLETCLRLLSLGAQANFFHPEKGNTPLHVAAKAGQILQAELLAVYGADPGAQDSSGMTPVDYARQGGHHE  214 (669)
T ss_pred             HHHHHHhhcccHHHHHHHHHcccccCCCCcccCCchhHHHHhccchhhhhHHhhccCCCCCCCCCCCcHHHHHHhcCchH
Confidence            56999999999999999999999999876 46899999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHc
Q psy903          271 VAKILLEY  278 (739)
Q Consensus       271 ii~~Ll~~  278 (739)
                      +.+.|++.
T Consensus       215 laeRl~e~  222 (669)
T KOG0818|consen  215 LAERLVEI  222 (669)
T ss_pred             HHHHHHHH
Confidence            99998874

>KOG3609|consensus

Probab=98.45  E-value=6.4e-07  Score=91.66  Aligned_cols=115  Identities=23%  Similarity=0.276  Sum_probs=76.7

Q ss_pred             HHHHHHHcCcHHHHHHHHHC----CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCcHHHHHHHcCCHHHHH
Q psy903          532 PLMEAAQEGHLELVRYLLDS----GAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQ  607 (739)
Q Consensus       532 ~L~~A~~~~~~~~v~~Ll~~----g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~l~~A~~~~~~~~v~  607 (739)
                      -...|++.|+.-.|+..++.    ..++|..|.-|++++++|+.+.+.|++++|+++....  ..+|..|+..|..++|+
T Consensus        28 ~fL~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--gdALL~aI~~~~v~~VE  105 (822)
T KOG3609|consen   28 GFLLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--GDALLLAIAVGSVPLVE  105 (822)
T ss_pred             HHHHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--chHHHHHHHHHHHHHHH
Confidence            34456666666666555553    1456667777777777777777777777777766655  56667777777777777


Q ss_pred             HHhhCCCCC----------CcCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC
Q psy903          608 LLLDFPRSV----------HAKTQTGDTALTYACENGHTDVADLLLSYGAN  648 (739)
Q Consensus       608 ~L~~~~~~~----------~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~  648 (739)
                      .++.+....          ...-.-+.||++.||..+++||+++|+.+|+.
T Consensus       106 ~ll~~~~~~~~~~~~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~  156 (822)
T KOG3609|consen  106 LLLVHFVDAPYLERSGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHC  156 (822)
T ss_pred             HHHhcccccchhccccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCC
Confidence            777654322          12223466788888888888888888888774

>KOG3609|consensus

Probab=98.43  E-value=5.3e-07  Score=92.21  Aligned_cols=125  Identities=21%  Similarity=0.256  Sum_probs=91.1

Q ss_pred             HHHHHcCCHHHHHHHhhCC----CCCCcCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCchHHHHHHhCCChhHHHHH
Q psy903          595 IEAAKGGHANVVQLLLDFP----RSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLL  670 (739)
Q Consensus       595 ~~A~~~~~~~~v~~L~~~~----~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~L~~A~~~g~~~~v~~L  670 (739)
                      -.|+..|+.-.|+..++..    ..+|..|.-|+++|++|+.+.+.+++++|++++...  ..+|.+|+..|...+|+.+
T Consensus        30 L~a~E~gd~~~V~k~l~~~~~~~lninc~d~lGr~al~iai~nenle~~eLLl~~~~~~--gdALL~aI~~~~v~~VE~l  107 (822)
T KOG3609|consen   30 LLAHENGDVPLVAKALEYKAVSKLNINCRDPLGRLALHIAIDNENLELQELLLDTSSEE--GDALLLAIAVGSVPLVELL  107 (822)
T ss_pred             HHHHHcCChHHHHHHHHhccccccchhccChHhhhceecccccccHHHHHHHhcCcccc--chHHHHHHHHHHHHHHHHH
Confidence            3445555555554444331    357888888999999999999999999999988766  6689999999999999999


Q ss_pred             hcCCCcccCCCCCCCCCCCchhhhccCCCccc-ccCCCCCchHHHHHHHcCcHHHHHHHHHcCCCCCC
Q psy903          671 LDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGV-HAKTQTGDTALTYACENGHTDVADLLLSYGANLRN  737 (739)
Q Consensus       671 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~g~t~l~~A~~~~~~~i~~~L~~~ga~~~~  737 (739)
                      +.+....-  ....              ..+. ...-..+.|||++||..++.||+++|+.+|+++-.
T Consensus       108 l~~~~~~~--~~~~--------------~~d~~~~~ft~ditPliLAAh~NnyEil~~Ll~kg~~i~~  159 (822)
T KOG3609|consen  108 LVHFVDAP--YLER--------------SGDANSPHFTPDITPLMLAAHLNNFEILQCLLTRGHCIPI  159 (822)
T ss_pred             Hhcccccc--hhcc--------------ccccCcccCCCCccHHHHHHHhcchHHHHHHHHcCCCCCC
Confidence            98754330  0000              0111 12224578999999999999999999999999753

>KOG0511|consensus

Probab=98.35  E-value=1.7e-06  Score=79.19  Aligned_cols=72  Identities=35%  Similarity=0.471  Sum_probs=61.0

Q ss_pred             cHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903          192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEA  263 (739)
Q Consensus       192 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A  263 (739)
                      --|..||+.|+.+.+++|++.|.++|..|....+||.+|+..|+.+++++|+++|+-...-.-+|...+..|
T Consensus        38 ~elceacR~GD~d~v~~LVetgvnVN~vD~fD~spL~lAsLcGHe~vvklLLenGAiC~rdtf~G~RC~Yga  109 (516)
T KOG0511|consen   38 GELCEACRAGDVDRVRYLVETGVNVNAVDRFDSSPLYLASLCGHEDVVKLLLENGAICSRDTFDGDRCHYGA  109 (516)
T ss_pred             HHHHHHhhcccHHHHHHHHHhCCCcchhhcccccHHHHHHHcCcHHHHHHHHHcCCcccccccCcchhhhhh
Confidence            568889999999999999999999999999999999999999999999999999987766555666555444

>KOG0705|consensus

Probab=98.32  E-value=2.1e-06  Score=83.11  Aligned_cols=92  Identities=26%  Similarity=0.413  Sum_probs=73.9

Q ss_pred             cHHHHHHHcCcHHHHHHHHHCCCCC----CCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          192 TPLMEAASSGFIEIVRLLINHGADV----NGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG  267 (739)
Q Consensus       192 t~L~~A~~~~~~~~~~~Ll~~g~~~----~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~  267 (739)
                      .-|.-|+...++..+-+|+.+|...    ...+.+|+|+||.|+..|+..+.++|+-+|+|+..+|..|+|+|.||-+.|
T Consensus       626 qqLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~  705 (749)
T KOG0705|consen  626 QQLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAG  705 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhcc
Confidence            4566777778888888888876432    234567788999998888888888888888888888888888988888888


Q ss_pred             ChHHHHHHHHcCCCCc
Q psy903          268 HVGVAKILLEYGAGIN  283 (739)
Q Consensus       268 ~~~ii~~Ll~~~~~~~  283 (739)
                      ..+++..|+++|....
T Consensus       706 sqec~d~llq~gcp~e  721 (749)
T KOG0705|consen  706 SQECIDVLLQYGCPDE  721 (749)
T ss_pred             cHHHHHHHHHcCCCcc
Confidence            8888888888887644

>KOG0522|consensus

Probab=98.27  E-value=3.1e-06  Score=81.59  Aligned_cols=76  Identities=29%  Similarity=0.334  Sum_probs=66.5

Q ss_pred             ChhhhhhcCCHHHHHHHHH--cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccc
Q psy903            1 SLVQACSDGDVKTVKKLLT--EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF   77 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~--~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~   77 (739)
                      |||.++...+.+-....+.  .+..++.+|..|+||||+|+..|+.+.+..|+.+||++...|+.|+ +|||.|+..|.
T Consensus        23 ~lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gW-s~L~EAv~~g~  100 (560)
T KOG0522|consen   23 PLHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGW-SPLHEAVSTGN  100 (560)
T ss_pred             ccchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccc-cHHHHHHHcCC
Confidence            4788888888887777554  3456788999999999999999999999999999999999998886 99999999993

>KOG0705|consensus

Probab=98.24  E-value=4.1e-06  Score=81.18  Aligned_cols=92  Identities=33%  Similarity=0.369  Sum_probs=77.7

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCc--c-ccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCc
Q psy903          159 LLSLACSAGYYELAQVLLAMHANV--E-DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH  235 (739)
Q Consensus       159 ~L~~A~~~~~~~~v~~Ll~~~~~~--~-~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~  235 (739)
                      -|-.|+...++..+-+|+.+|...  + ......|.|+||+|++.|+..+.++|+=+|+|+-.+|..|+|+|.||-..|.
T Consensus       627 qLl~A~~~~Dl~t~~lLLAhg~~~e~~~t~~~~~grt~LHLa~~~gnVvl~QLLiWyg~dv~~rda~g~t~l~yar~a~s  706 (749)
T KOG0705|consen  627 QLLRAVAAEDLQTAILLLAHGSREEVNETCGEGDGRTALHLAARKGNVVLAQLLIWYGVDVMARDAHGRTALFYARQAGS  706 (749)
T ss_pred             HHHHHHHHHHHHHHHHHHhccCchhhhccccCCCCcchhhhhhhhcchhHHHHHHHhCccceecccCCchhhhhHhhccc
Confidence            456677778888888999888543  2 3334445899999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCCC
Q psy903          236 EAVVRVLLECGANVE  250 (739)
Q Consensus       236 ~~~v~~Ll~~~~~~~  250 (739)
                      .+++..|+.+|...+
T Consensus       707 qec~d~llq~gcp~e  721 (749)
T KOG0705|consen  707 QECIDVLLQYGCPDE  721 (749)
T ss_pred             HHHHHHHHHcCCCcc
Confidence            999999999987644

>KOG2384|consensus

Probab=98.22  E-value=5.4e-06  Score=68.25  Aligned_cols=72  Identities=25%  Similarity=0.273  Sum_probs=61.2

Q ss_pred             CCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcc
Q psy903          213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG-ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINT  284 (739)
Q Consensus       213 g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~  284 (739)
                      +.++|.+|..|+||+++|+..|+.+.+.||+.+| +.+...|..+.+++.+|-+.|..++++.|.++..+-..
T Consensus         2 e~~in~rD~fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~~ets~   74 (223)
T KOG2384|consen    2 EGNINARDAFGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFENDRETSH   74 (223)
T ss_pred             CCCccchhhhcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHhccCCC
Confidence            4578889999999999999999999999999999 88888888999999999999999999998887544333

>KOG0522|consensus

Probab=98.19  E-value=4.6e-06  Score=80.42  Aligned_cols=84  Identities=29%  Similarity=0.385  Sum_probs=45.6

Q ss_pred             HHHHHHcCcHHHHHHHH--HCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHH
Q psy903          194 LMEAASSGFIEIVRLLI--NHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGV  271 (739)
Q Consensus       194 L~~A~~~~~~~~~~~Ll--~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~i  271 (739)
                      +|.+......+-...++  +.+..++..|..|.||||.|+.-|+.+.++.|+..|+++..+|..|++|||.|+..|+.++
T Consensus        24 lh~~~~~~~~~sl~~el~~~~~~~id~~D~~g~TpLhlAV~Lg~~~~a~~Ll~a~Adv~~kN~~gWs~L~EAv~~g~~q~  103 (560)
T KOG0522|consen   24 LHWAVVTTDSDSLEQELLAKVSLVIDRRDPPGRTPLHLAVRLGHVEAARILLSAGADVSIKNNEGWSPLHEAVSTGNEQI  103 (560)
T ss_pred             cchhhhccchhhHHHHHhhhhhceeccccCCCCccHHHHHHhcCHHHHHHHHhcCCCccccccccccHHHHHHHcCCHHH
Confidence            55555544443333322  2233445555556666666666666666666666666666666666666666666665555


Q ss_pred             HHHHHH
Q psy903          272 AKILLE  277 (739)
Q Consensus       272 i~~Ll~  277 (739)
                      +..++.
T Consensus       104 i~~vlr  109 (560)
T KOG0522|consen  104 ITEVLR  109 (560)
T ss_pred             HHHHHH
Confidence            555554

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=97.77  E-value=0.00049  Score=57.18  Aligned_cols=44  Identities=25%  Similarity=0.285  Sum_probs=27.3

Q ss_pred             HHHHHhCCChhHHHHHhcCCCcccCCCCCCCCCCCchhhhccCCCcccccCCCCCchHHHHHHHcCcHHHHHHHH
Q psy903          655 LIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLL  729 (739)
Q Consensus       655 L~~A~~~g~~~~v~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~l~~A~~~~~~~i~~~L~  729 (739)
                      |..|+..|-+..|...+.+|.+.                               ..++|..|+.++|..|+.+++
T Consensus       147 l~~a~~kgll~F~letlkygg~~-------------------------------~~~vls~Av~ynhRkIL~yfi  190 (192)
T PF03158_consen  147 LEKAAAKGLLPFVLETLKYGGNV-------------------------------DIIVLSQAVKYNHRKILDYFI  190 (192)
T ss_pred             HHHHHHCCCHHHHHHHHHcCCcc-------------------------------cHHHHHHHHHhhHHHHHHHhh
Confidence            56666666666666666654333                               125677777777777776665

These proteins may be involved in promoting survival of infected macrophages [].

>KOG0521|consensus

Probab=97.76  E-value=3.9e-05  Score=81.73  Aligned_cols=75  Identities=39%  Similarity=0.524  Sum_probs=37.7

Q ss_pred             cHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhc
Q psy903          192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASA  266 (739)
Q Consensus       192 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~  266 (739)
                      |+||.|+..+..-+.+.|+++|+++|..|..|+||+|.+...|+...+..|+++|++.+..+.+|.+|+.+|...
T Consensus       658 s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  658 SLLHVAVGTGDSGAVELLLQNGADVNALDSKGRTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             chhhhhhccchHHHHHHHHhcCCcchhhhccCCCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence            455555555555555555555555555555555555555555555555555555555555555555555544433

>KOG2384|consensus

Probab=97.70  E-value=0.00012  Score=60.65  Aligned_cols=58  Identities=34%  Similarity=0.285  Sum_probs=36.3

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCC
Q psy903          189 GECTPLMEAASSGFIEIVRLLINHG-ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG  246 (739)
Q Consensus       189 ~~~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~  246 (739)
                      .|||+++.|+..|+.+.+.||+.+| +.+..+|..+.+++.+|-+.|..+++..|.+..
T Consensus        11 fgWTalmcaa~eg~~eavsyllgrg~a~vgv~d~ssldaaqlaek~g~~~fvh~lfe~~   69 (223)
T KOG2384|consen   11 FGWTALMCAAMEGSNEAVSYLLGRGVAFVGVTDESSLDAAQLAEKGGAQAFVHSLFEND   69 (223)
T ss_pred             hcchHHHHHhhhcchhHHHHHhccCcccccccccccchHHHHHHhcChHHHHHHHHHHh
Confidence            3456666666666666666666666 556666666666666666666666666666553

>PF03158 DUF249: Multigene family 530 protein; InterPro: IPR004858 This entry represents multigene family 530 proteins from African swine fever virus (ASFV) viruses

Probab=97.64  E-value=0.0011  Score=55.23  Aligned_cols=46  Identities=26%  Similarity=0.360  Sum_probs=34.5

Q ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCchHHHHHHhCCChhHHHHHhc
Q psy903          626 ALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLD  672 (739)
Q Consensus       626 ~l~~A~~~~~~~~v~~L~~~~~~~~~~~~L~~A~~~g~~~~v~~L~~  672 (739)
                      -|..|+..|-++.|.-.+++|-+.+. ++|-.|++.+|..++.+++.
T Consensus       146 hl~~a~~kgll~F~letlkygg~~~~-~vls~Av~ynhRkIL~yfi~  191 (192)
T PF03158_consen  146 HLEKAAAKGLLPFVLETLKYGGNVDI-IVLSQAVKYNHRKILDYFIR  191 (192)
T ss_pred             HHHHHHHCCCHHHHHHHHHcCCcccH-HHHHHHHHhhHHHHHHHhhc
Confidence            46678888888887777787765544 67888888888888887754

These proteins may be involved in promoting survival of infected macrophages [].

>KOG0521|consensus

Probab=97.52  E-value=9.7e-05  Score=78.80  Aligned_cols=89  Identities=35%  Similarity=0.424  Sum_probs=79.2

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhc
Q psy903          154 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAG  233 (739)
Q Consensus       154 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~  233 (739)
                      ..|.|+||.|+..|..-++++|+++|++++..+..+ .+|+|.+...|+......|+++|++++..+..|.++|++|...
T Consensus       654 ~~~~s~lh~a~~~~~~~~~e~ll~~ga~vn~~d~~g-~~plh~~~~~g~~~~~~~ll~~~a~~~a~~~~~~~~l~~a~~~  732 (785)
T KOG0521|consen  654 CIGCSLLHVAVGTGDSGAVELLLQNGADVNALDSKG-RTPLHHATASGHTSIACLLLKRGADPNAFDPDGKLPLDIAMEA  732 (785)
T ss_pred             hcccchhhhhhccchHHHHHHHHhcCCcchhhhccC-CCcchhhhhhcccchhhhhccccccccccCccCcchhhHHhhh
Confidence            457899999999999999999999999988877665 5999999999999999999999999999999999999999887


Q ss_pred             CcHHHHHHHH
Q psy903          234 GHEAVVRVLL  243 (739)
Q Consensus       234 ~~~~~v~~Ll  243 (739)
                      .+.+++-++.
T Consensus       733 ~~~d~~~l~~  742 (785)
T KOG0521|consen  733 ANADIVLLLR  742 (785)
T ss_pred             ccccHHHHHh
Confidence            6666555443

>KOG0520|consensus

Probab=97.37  E-value=0.00098  Score=70.88  Aligned_cols=129  Identities=22%  Similarity=0.230  Sum_probs=83.1

Q ss_pred             CCcCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHH
Q psy903          149 VHETTDEGESLLSLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPL  227 (739)
Q Consensus       149 ~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L  227 (739)
                      .......|.+.+|.++..+..-+++.+++- +......+ ..+.-.+|+++..|..-.+....-.|..++.+|..|+|||
T Consensus       567 ~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld-~d~qgV~hfca~lg~ewA~ll~~~~~~ai~i~D~~G~tpL  645 (975)
T KOG0520|consen  567 SSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELD-RDGQGVIHFCAALGYEWAFLPISADGVAIDIRDRNGWTPL  645 (975)
T ss_pred             cccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhc-ccCCChhhHhhhcCCceeEEEEeecccccccccCCCCccc
Confidence            333445677888888888888888888775 33322222 2234667774444443333333345777888888888888


Q ss_pred             HHHHhcCcHHHHHHHHHCCCCCC------CCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          228 MYACAGGHEAVVRVLLECGANVE------DHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       228 ~~A~~~~~~~~v~~Ll~~~~~~~------~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                      |+|+..|+..++..|++.|++..      ...-.|.|+-..|-.+|+..+.-+|-+.
T Consensus       646 ~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  646 HWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             chHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            88888888888888887665432      2334466777777777777776666554

>KOG0520|consensus

Probab=97.16  E-value=0.0013  Score=70.02  Aligned_cols=136  Identities=22%  Similarity=0.198  Sum_probs=104.2

Q ss_pred             HHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHH-HhCCCCcccc
Q psy903          108 AAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVL-LAMHANVEDR  185 (739)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~L-l~~~~~~~~~  185 (739)
                      ...............+.+.+|.++..+...+++.+++- |-.....|.+|.-.+|+++. ++++.+-+| ...|..++..
T Consensus       559 ~~~~~~~~~~~~~~r~~lllhL~a~~lyawLie~~~e~~~~~~~eld~d~qgV~hfca~-lg~ewA~ll~~~~~~ai~i~  637 (975)
T KOG0520|consen  559 LKSISENLSSSVNFRDMLLLHLLAELLYAWLIEKVIEWAGSGDLELDRDGQGVIHFCAA-LGYEWAFLPISADGVAIDIR  637 (975)
T ss_pred             HhhHhhhccccCCCcchHHHHHHHHHhHHHHHHHHhcccccCchhhcccCCChhhHhhh-cCCceeEEEEeecccccccc
Confidence            33344445556667889999999999999999999996 66666777788888999554 555554444 4555666555


Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCC------CCCCCCCCcHHHHHHhcCcHHHHHHHHHC
Q psy903          186 GIKGECTPLMEAASSGFIEIVRLLINHGADV------NGQSSSGNTPLMYACAGGHEAVVRVLLEC  245 (739)
Q Consensus       186 ~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~------~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~  245 (739)
                      + ..||||||+|+..|+..++..|+..|++.      ......|.|+-..|-.+|+..+.-+|-+.
T Consensus       638 D-~~G~tpL~wAa~~G~e~l~a~l~~lga~~~~~tdps~~~p~g~ta~~la~s~g~~gia~~lse~  702 (975)
T KOG0520|consen  638 D-RNGWTPLHWAAFRGREKLVASLIELGADPGAVTDPSPETPGGKTAADLARANGHKGIAGYLSEK  702 (975)
T ss_pred             c-CCCCcccchHhhcCHHHHHHHHHHhccccccccCCCCCCCCCCchhhhhhcccccchHHHHhhh
Confidence            5 55689999999999999999999876553      44556799999999999999988888764

>smart00248 ANK ankyrin repeats

Probab=97.13  E-value=0.00083  Score=38.05  Aligned_cols=29  Identities=45%  Similarity=0.701  Sum_probs=26.9

Q ss_pred             CCchHHHHHHHcCcHHHHHHHHHcCCCCC
Q psy903          708 TGDTALTYACENGHTDVADLLLSYGANLR  736 (739)
Q Consensus       708 ~g~t~l~~A~~~~~~~i~~~L~~~ga~~~  736 (739)
                      .|.||+++|+..++.+++++|+++|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            37899999999999999999999999876

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>smart00248 ANK ankyrin repeats

Probab=97.12  E-value=0.0007  Score=38.36  Aligned_cols=29  Identities=31%  Similarity=0.541  Sum_probs=26.2

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHHHcccccc
Q psy903           30 EGESLLSLACSAGYYELAQVLLAMHANVE   58 (739)
Q Consensus        30 ~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~   58 (739)
                      .|.||||+|+..|+.++++.|+++|.+++
T Consensus         1 ~~~~~l~~~~~~~~~~~~~~ll~~~~~~~   29 (30)
T smart00248        1 DGRTPLHLAAENGNLEVVKLLLDKGADIN   29 (30)
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            47899999999999999999999998763

Ankyrin repeats are about 33 amino acids long and occur in at least four consecutive copies. They are involved in protein-protein interactions. The core of the repeat seems to be an helix-loop-helix structure.

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=96.77  E-value=0.012  Score=50.79  Aligned_cols=118  Identities=23%  Similarity=0.290  Sum_probs=67.2

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccc--cCCCCCCcHHHHHHH-
Q psy903          123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED--RGIKGECTPLMEAAS-  199 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~~~t~L~~A~~-  199 (739)
                      ..-.|-.|+..-+++.+.-++...       .+-.++|-+|+.++..+++.+|+++-.-...  ..-..+.--+.++.. 
T Consensus       153 r~isledAV~AsN~~~i~~~VtdK-------kdA~~Am~~si~~~K~dva~~lls~f~ft~~dv~~~~~~~ydieY~LS~  225 (284)
T PF06128_consen  153 RDISLEDAVKASNYEEISNLVTDK-------KDAHQAMWLSIGNAKEDVALYLLSKFNFTKQDVASMEKELYDIEYLLSE  225 (284)
T ss_pred             ccccHHHHHhhcCHHHHHHHhcch-------HHHHHHHHHHhcccHHHHHHHHHhhcceecchhhhcCcchhhHHHHHhh
Confidence            355688999999999988888642       2234688899999999999999986421100  000011122223222 


Q ss_pred             -cCcHHHHHHHHHCC-CCCCC---CCCCCCcHHHHHHhcCcHHHHHHHHHCCC
Q psy903          200 -SGFIEIVRLLINHG-ADVNG---QSSSGNTPLMYACAGGHEAVVRVLLECGA  247 (739)
Q Consensus       200 -~~~~~~~~~Ll~~g-~~~~~---~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~  247 (739)
                       ..+..++++++++| +++|.   +-..|.|-|..|+++++.+++.+|+++|+
T Consensus       226 h~a~~kvL~~Fi~~Glv~vN~~F~~~NSGdtMLDNA~Ky~~~emi~~Llk~GA  278 (284)
T PF06128_consen  226 HSASYKVLEYFINRGLVDVNKKFQKVNSGDTMLDNAMKYKNSEMIAFLLKYGA  278 (284)
T ss_pred             cCCcHHHHHHHHhccccccchhhhccCCcchHHHhHHhcCcHHHHHHHHHcCc
Confidence             22344555555554 23332   23445555555555555555555555554

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>PF06128 Shigella_OspC: Shigella flexneri OspC protein; InterPro: IPR010366 This family consists of the Shigella flexneri specific protein OspC

Probab=96.74  E-value=0.012  Score=50.62  Aligned_cols=45  Identities=20%  Similarity=0.311  Sum_probs=32.1

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHH
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLA   52 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~   52 (739)
                      +|-.|+...+++.+..++...-       .-.++|.+|+..+.-+++.+|+.
T Consensus       156 sledAV~AsN~~~i~~~VtdKk-------dA~~Am~~si~~~K~dva~~lls  200 (284)
T PF06128_consen  156 SLEDAVKASNYEEISNLVTDKK-------DAHQAMWLSIGNAKEDVALYLLS  200 (284)
T ss_pred             cHHHHHhhcCHHHHHHHhcchH-------HHHHHHHHHhcccHHHHHHHHHh
Confidence            3667888888887777766311       12467888888888888888886

The function of this family is unknown but it is thought that Osp proteins may be involved in postinvasion events related to virulence. Since bacterial pathogens adapt to multiple environments during the course of infecting a host, it has been proposed that Shigella evolved a mechanism to take advantage of a unique intracellular cue, which is mediated through MxiE, to express proteins when the organism reaches the eukaryotic cytosol [].

>KOG2505|consensus

Probab=96.74  E-value=0.0025  Score=61.55  Aligned_cols=63  Identities=25%  Similarity=0.269  Sum_probs=53.9

Q ss_pred             cHHHHHHHHHCCCCCC------CCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903          202 FIEIVRLLINHGADVN------GQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAA  264 (739)
Q Consensus       202 ~~~~~~~Ll~~g~~~~------~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~  264 (739)
                      -...|++|.+++.+.|      ..+....|+||+|+..|.-++|.+||+.|+|+..+|..|+||+..+.
T Consensus       403 ~p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Grtpy~ls~  471 (591)
T KOG2505|consen  403 EPDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGRTPYSLSA  471 (591)
T ss_pred             chhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCCCcccccc
Confidence            3667888888876654      34556789999999999999999999999999999999999999876

>KOG2505|consensus

Probab=96.59  E-value=0.003  Score=61.02  Aligned_cols=62  Identities=16%  Similarity=0.119  Sum_probs=53.4

Q ss_pred             HHHHHHHHHcCCCCccc------CCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHh
Q psy903           11 VKTVKKLLTEGRSVHET------TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA   73 (739)
Q Consensus        11 ~~~v~~ll~~g~~~~~~------~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~   73 (739)
                      .+.|.+|.+++.+.|..      +.--.|+||+|+.+|.-++|.+||+.|+|+...|..|. ||..++.
T Consensus       404 p~~ie~lken~lsgnf~~~pe~~~~ltsT~LH~aa~qg~~k~v~~~Leeg~Dp~~kd~~Gr-tpy~ls~  471 (591)
T KOG2505|consen  404 PDSIEALKENLLSGNFDVTPEANDYLTSTFLHYAAAQGARKCVKYFLEEGCDPSTKDGAGR-TPYSLSA  471 (591)
T ss_pred             hhHHHHHHhcCCcccccccccccccccchHHHHHHhcchHHHHHHHHHhcCCchhcccCCC-Ccccccc
Confidence            56788888887776543      44578999999999999999999999999999998887 9999988

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=94.10  E-value=0.094  Score=38.01  Aligned_cols=47  Identities=19%  Similarity=0.315  Sum_probs=38.3

Q ss_pred             cHHHHHHHcCCHHHHHHHHHcCCCCCCchHHHHHHhCCChhHHHHHhcC
Q psy903          625 TALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDF  673 (739)
Q Consensus       625 t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~L~~A~~~g~~~~v~~L~~~  673 (739)
                      ..+..|+..|+.|+++.+++.+ . .....|..|++.-+-++++||+++
T Consensus         8 ~tl~~Ai~GGN~eII~~c~~~~-~-~~~~~l~~AI~~H~n~i~~~l~~~   54 (76)
T PF11929_consen    8 KTLEYAIIGGNFEIINICLKKN-K-PDNDCLEYAIKSHNNEIADWLIEN   54 (76)
T ss_pred             HHHHHHHhCCCHHHHHHHHHHh-c-cHHHHHHHHHHHhhHHHHHHHHHh
Confidence            4678899999999999888766 2 226779999999999999999884

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PF11929 DUF3447: Domain of unknown function (DUF3447); InterPro: IPR020683 This entry represents the ankyrin repeat-containing domain

Probab=93.46  E-value=0.22  Score=36.14  Aligned_cols=66  Identities=21%  Similarity=0.276  Sum_probs=49.5

Q ss_pred             CcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCchHHHHHHhCCChhH
Q psy903          591 STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANV  666 (739)
Q Consensus       591 ~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~~~~~~L~~A~~~g~~~~  666 (739)
                      ...+..|+..|+.|+++.+++.+ .++      ...+..|+...+-++++||+++- +.  .-.+..+.+.+++++
T Consensus         7 ~~tl~~Ai~GGN~eII~~c~~~~-~~~------~~~l~~AI~~H~n~i~~~l~~~y-~~--~i~~~~~~~~~N~~a   72 (76)
T PF11929_consen    7 KKTLEYAIIGGNFEIINICLKKN-KPD------NDCLEYAIKSHNNEIADWLIENY-NL--KISISDCLKYYNLRA   72 (76)
T ss_pred             HHHHHHHHhCCCHHHHHHHHHHh-ccH------HHHHHHHHHHhhHHHHHHHHHhc-CC--CcCHHHHHHHCChHh
Confidence            45689999999999999998754 111      45799999999999999999973 22  123566667766654

These domains contain multiple repeats of a beta(2)-alpha(2) motif. The ankyrin repeat is one of the most common protein-protein interaction motifs in nature. Ankyrin repeats are tandemly repeated modules of about 33 amino acids. They occur in a large number of functionally diverse proteins mainly from eukaryotes. The few known examples from prokaryotes and viruses may be the result of horizontal gene transfers []. The repeat has been found in proteins of diverse function such as transcriptional initiators, cell-cycle regulators, cytoskeletal, ion transporters and signal transducers. The ankyrin fold appears to be defined by its structure rather than its function since there is no specific sequence or structure which is universally recognised by it. The conserved fold of the ankyrin repeat unit is known from several crystal and solution structures [, , , ]. Each repeat folds into a helix-loop-helix structure with a beta-hairpin/loop region projecting out from the helices at a 90o angle. The repeats stack together to form an L-shaped structure [, ].

>PLN03077 Protein ECB2; Provisional

Probab=89.58  E-value=45  Score=38.38  Aligned_cols=462  Identities=12%  Similarity=0.064  Sum_probs=209.7

Q ss_pred             HHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHH-HHcCc----HHHHHHHHH
Q psy903          137 KTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEA-ASSGF----IEIVRLLIN  211 (739)
Q Consensus       137 ~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A-~~~~~----~~~~~~Ll~  211 (739)
                      ++...+++.|...+..  ...+.+...+..|+++-+..+.+.-...+..    .|+.+..+ ++.|.    .++++.+.+
T Consensus       208 ~~~~~~~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~lf~~m~~~d~~----s~n~li~~~~~~g~~~eAl~lf~~M~~  281 (857)
T PLN03077        208 EVHAHVVRFGFELDVD--VVNALITMYVKCGDVVSARLVFDRMPRRDCI----SWNAMISGYFENGECLEGLELFFTMRE  281 (857)
T ss_pred             HHHHHHHHcCCCcccc--hHhHHHHHHhcCCCHHHHHHHHhcCCCCCcc----hhHHHHHHHHhCCCHHHHHHHHHHHHH
Confidence            3444455556555433  2345667777788888777777665433222    13444444 44454    334455556


Q ss_pred             CCCCCCCCCCCCCcHHHHHHhcCcHHH----HHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCc
Q psy903          212 HGADVNGQSSSGNTPLMYACAGGHEAV----VRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSN  287 (739)
Q Consensus       212 ~g~~~~~~~~~~~t~L~~A~~~~~~~~----v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~  287 (739)
                      .|..++....  .+.+...+..|..+.    .....+.|..++..  ...+.+...++.|+.+-+..+++.-...+..  
T Consensus       282 ~g~~Pd~~ty--~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~d~~--~~n~Li~~y~k~g~~~~A~~vf~~m~~~d~~--  355 (857)
T PLN03077        282 LSVDPDLMTI--TSVISACELLGDERLGREMHGYVVKTGFAVDVS--VCNSLIQMYLSLGSWGEAEKVFSRMETKDAV--  355 (857)
T ss_pred             cCCCCChhHH--HHHHHHHHhcCChHHHHHHHHHHHHhCCccchH--HHHHHHHHHHhcCCHHHHHHHHhhCCCCCee--
Confidence            6766653321  234444445565543    33444556554432  2234566667778888777777654332211  


Q ss_pred             CccCCHHHHHHHcCCHH----HHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHH----HcCCCchhhhcccCCC
Q psy903          288 EFKESALTLACYKGHLD----MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLL----DSGAQSVSAYARHDFF  359 (739)
Q Consensus       288 ~~~~~~l~~A~~~~~~~----~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~----~~~~~~~~~~~~~~~~  359 (739)
                       .-.+.+...++.|+.+    +++.+.+.|..++...  ..+.+...+..|..+....+.    +.|....         
T Consensus       356 -s~n~li~~~~~~g~~~~A~~lf~~M~~~g~~Pd~~t--~~~ll~a~~~~g~~~~a~~l~~~~~~~g~~~~---------  423 (857)
T PLN03077        356 -SWTAMISGYEKNGLPDKALETYALMEQDNVSPDEIT--IASVLSACACLGDLDVGVKLHELAERKGLISY---------  423 (857)
T ss_pred             -eHHHHHHHHHhCCCHHHHHHHHHHHHHhCCCCCcee--HHHHHHHHhccchHHHHHHHHHHHHHhCCCcc---------
Confidence             1123444445566544    3333444555444321  123444444556655444433    3332211         


Q ss_pred             CCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCH-HHHHHHcCcHHHHHHHHHcCCCcccccC
Q psy903          360 PNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL-LSLACSAGYYELAQVLLAMHANVEDRGI  438 (739)
Q Consensus       360 ~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~-l~~a~~~~~~~~v~~Ll~~~~~~~~~~~  438 (739)
                                 ...+...+..-+..|+.+....+++.-...+   ....+. +...+..+..+-+..+++.-......+.
T Consensus       424 -----------~~~~n~Li~~y~k~g~~~~A~~vf~~m~~~d---~vs~~~mi~~~~~~g~~~eA~~lf~~m~~~~~pd~  489 (857)
T PLN03077        424 -----------VVVANALIEMYSKCKCIDKALEVFHNIPEKD---VISWTSIIAGLRLNNRCFEALIFFRQMLLTLKPNS  489 (857)
T ss_pred             -----------hHHHHHHHHHHHHcCCHHHHHHHHHhCCCCC---eeeHHHHHHHHHHCCCHHHHHHHHHHHHhCCCCCH
Confidence                       1122223444556677766666665432221   112222 2223344443322222221110001110


Q ss_pred             CCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHH
Q psy903          439 KGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFL  518 (739)
Q Consensus       439 ~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~L  518 (739)
                      ..-.+.+...+..+......++....                    +..+...+..   .....+..-++.|+++-...+
T Consensus       490 ~t~~~lL~a~~~~g~l~~~~~i~~~~--------------------~~~g~~~~~~---~~naLi~~y~k~G~~~~A~~~  546 (857)
T PLN03077        490 VTLIAALSACARIGALMCGKEIHAHV--------------------LRTGIGFDGF---LPNALLDLYVRCGRMNYAWNQ  546 (857)
T ss_pred             hHHHHHHHHHhhhchHHHhHHHHHHH--------------------HHhCCCccce---echHHHHHHHHcCCHHHHHHH
Confidence            00011111122222222222222111                    1222222211   123556667777887766666


Q ss_pred             HHcCCCCCCCCCcHHH-HHHHcCcHH----HHHHHHHCCCCCCCCCCCCCcHHHHHH-HcCcHH----HHHHHH-hCCCC
Q psy903          519 LKNGANIELGASTPLM-EAAQEGHLE----LVRYLLDSGAQVHAKTQTGDTALTYAC-ENGHTD----VADLLL-SYGAN  587 (739)
Q Consensus       519 l~~~~~~~~~~~t~L~-~A~~~~~~~----~v~~Ll~~g~~~~~~d~~g~t~l~~A~-~~~~~~----iv~~Ll-~~~~~  587 (739)
                      ++.. ..|....+.+. ..+..|..+    +++.+.+.|..++...   .+.+..|+ ..|..+    +++.+. ++|..
T Consensus       547 f~~~-~~d~~s~n~lI~~~~~~G~~~~A~~lf~~M~~~g~~Pd~~T---~~~ll~a~~~~g~v~ea~~~f~~M~~~~gi~  622 (857)
T PLN03077        547 FNSH-EKDVVSWNILLTGYVAHGKGSMAVELFNRMVESGVNPDEVT---FISLLCACSRSGMVTQGLEYFHSMEEKYSIT  622 (857)
T ss_pred             HHhc-CCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCCccc---HHHHHHHHhhcChHHHHHHHHHHHHHHhCCC
Confidence            6554 34433333333 344566554    4555555676665433   33443333 445553    344444 34544


Q ss_pred             CCC---CcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHHH-cCCHHHH----HHHHHcCCCCCCchHHH--H
Q psy903          588 LDN---STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACE-NGHTDVA----DLLLSYGANLDNSTMLI--E  657 (739)
Q Consensus       588 ~~~---~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~-~~~~~~v----~~L~~~~~~~~~~~~L~--~  657 (739)
                      ++.   ...+..-++.|.++-..-+++.-.  -..|..-+++|..|+. +++.++.    +.+++-.++..+...+.  .
T Consensus       623 P~~~~y~~lv~~l~r~G~~~eA~~~~~~m~--~~pd~~~~~aLl~ac~~~~~~e~~e~~a~~l~~l~p~~~~~y~ll~n~  700 (857)
T PLN03077        623 PNLKHYACVVDLLGRAGKLTEAYNFINKMP--ITPDPAVWGALLNACRIHRHVELGELAAQHIFELDPNSVGYYILLCNL  700 (857)
T ss_pred             CchHHHHHHHHHHHhCCCHHHHHHHHHHCC--CCCCHHHHHHHHHHHHHcCChHHHHHHHHHHHhhCCCCcchHHHHHHH
Confidence            442   334555667788776666665421  1233344556666664 4666654    44555555544433321  2


Q ss_pred             HHhCCChh
Q psy903          658 AAKGGHAN  665 (739)
Q Consensus       658 A~~~g~~~  665 (739)
                      -+..|+.+
T Consensus       701 ya~~g~~~  708 (857)
T PLN03077        701 YADAGKWD  708 (857)
T ss_pred             HHHCCChH
Confidence            24566655

>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional

Probab=89.15  E-value=42  Score=37.47  Aligned_cols=307  Identities=14%  Similarity=0.107  Sum_probs=147.1

Q ss_pred             HHHcCCHHHHHHH----HhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHH-HHHHcCcHH
Q psy903          130 ACSDGDVKTVKKL----LTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM-EAASSGFIE  204 (739)
Q Consensus       130 A~~~~~~~~~~~l----l~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~-~A~~~~~~~  204 (739)
                      ++..|..+..+.+    ++.|...+..  -..+.+...+..|+++-+..+.+.-...+..    .|+.|. .-+..|..+
T Consensus       234 ~~~~~~~~~~~~l~~~~~~~g~~~d~~--~~n~Li~~y~k~g~~~~A~~vf~~m~~~~~v----t~n~li~~y~~~g~~~  307 (697)
T PLN03081        234 SAGLGSARAGQQLHCCVLKTGVVGDTF--VSCALIDMYSKCGDIEDARCVFDGMPEKTTV----AWNSMLAGYALHGYSE  307 (697)
T ss_pred             HhcCCcHHHHHHHHHHHHHhCCCccce--eHHHHHHHHHHCCCHHHHHHHHHhCCCCChh----HHHHHHHHHHhCCCHH
Confidence            3345555444433    4455444322  2345677777888888777666654332221    133333 345566543


Q ss_pred             ----HHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHH----HHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHH
Q psy903          205 ----IVRLLINHGADVNGQSSSGNTPLMYACAGGHEA----VVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILL  276 (739)
Q Consensus       205 ----~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~----~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll  276 (739)
                          +++.+.+.|..++...  -.+.+...+..|..+    +...+++.|..++..  -..+.+...++.|+++-+..++
T Consensus       308 eA~~lf~~M~~~g~~pd~~t--~~~ll~a~~~~g~~~~a~~i~~~m~~~g~~~d~~--~~~~Li~~y~k~G~~~~A~~vf  383 (697)
T PLN03081        308 EALCLYYEMRDSGVSIDQFT--FSIMIRIFSRLALLEHAKQAHAGLIRTGFPLDIV--ANTALVDLYSKWGRMEDARNVF  383 (697)
T ss_pred             HHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhccchHHHHHHHHHHHHhCCCCCee--ehHHHHHHHHHCCCHHHHHHHH
Confidence                4444556676664332  123344444555554    444555666655432  2335666777888888888888


Q ss_pred             HcCCCCcccCcCccCCHHHHHHHcCCHH----HHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhh
Q psy903          277 EYGAGINTHSNEFKESALTLACYKGHLD----MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA  352 (739)
Q Consensus       277 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~----~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~  352 (739)
                      +.-...+...   -.+.+...++.|+.+    +++.+.+.|..++...  ....+......|..+-...+++.-...   
T Consensus       384 ~~m~~~d~~t---~n~lI~~y~~~G~~~~A~~lf~~M~~~g~~Pd~~T--~~~ll~a~~~~g~~~~a~~~f~~m~~~---  455 (697)
T PLN03081        384 DRMPRKNLIS---WNALIAGYGNHGRGTKAVEMFERMIAEGVAPNHVT--FLAVLSACRYSGLSEQGWEIFQSMSEN---  455 (697)
T ss_pred             HhCCCCCeee---HHHHHHHHHHcCCHHHHHHHHHHHHHhCCCCCHHH--HHHHHHHHhcCCcHHHHHHHHHHHHHh---
Confidence            7644322211   123444455666643    4444455566554322  112333334555555444443321100   


Q ss_pred             hcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHC-CCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Q psy903          353 YARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA  431 (739)
Q Consensus       353 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~-~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~  431 (739)
                         ....       |  ....+...+..-+..|.++-...+++. +..++.  ....+.+......|+.+..+...+.-.
T Consensus       456 ---~g~~-------p--~~~~y~~li~~l~r~G~~~eA~~~~~~~~~~p~~--~~~~~Ll~a~~~~g~~~~a~~~~~~l~  521 (697)
T PLN03081        456 ---HRIK-------P--RAMHYACMIELLGREGLLDEAYAMIRRAPFKPTV--NMWAALLTACRIHKNLELGRLAAEKLY  521 (697)
T ss_pred             ---cCCC-------C--CccchHhHHHHHHhcCCHHHHHHHHHHCCCCCCH--HHHHHHHHHHHHcCCcHHHHHHHHHHh
Confidence               0000       0  111233345556677887776666654 222211  112233444557788887777665532


Q ss_pred             CcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccC
Q psy903          432 NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHD  468 (739)
Q Consensus       432 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~  468 (739)
                      .....+...-..-....+..+.......+.+......
T Consensus       522 ~~~p~~~~~y~~L~~~y~~~G~~~~A~~v~~~m~~~g  558 (697)
T PLN03081        522 GMGPEKLNNYVVLLNLYNSSGRQAEAAKVVETLKRKG  558 (697)
T ss_pred             CCCCCCCcchHHHHHHHHhCCCHHHHHHHHHHHHHcC
Confidence            2222211111122333455566655555555554443

>PLN03218 maturation of RBCL 1; Provisional

Probab=88.45  E-value=56  Score=38.08  Aligned_cols=198  Identities=13%  Similarity=0.083  Sum_probs=85.5

Q ss_pred             HHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHH----HHHHhCCCCccccCCCCCCcHHHHHHHcCcHH--
Q psy903          131 CSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELA----QVLLAMHANVEDRGIKGECTPLMEAASSGFIE--  204 (739)
Q Consensus       131 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v----~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~--  204 (739)
                      +..|..+-...+.+.-..++..  .-.+.|...+..|+++-+    +.+.+.|..++....   .+.+...++.|..+  
T Consensus       417 ~~~g~~~eAl~lf~~M~~pd~~--Tyn~LL~a~~k~g~~e~A~~lf~~M~~~Gl~pD~~ty---nsLI~~y~k~G~vd~A  491 (1060)
T PLN03218        417 KKQRAVKEAFRFAKLIRNPTLS--TFNMLMSVCASSQDIDGALRVLRLVQEAGLKADCKLY---TTLISTCAKSGKVDAM  491 (1060)
T ss_pred             HHCCCHHHHHHHHHHcCCCCHH--HHHHHHHHHHhCcCHHHHHHHHHHHHHcCCCCCHHHH---HHHHHHHHhCcCHHHH
Confidence            3455555444444433322111  112345555566665433    333444444332221   13444455666654  


Q ss_pred             --HHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHH----HHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          205 --IVRLLINHGADVNGQSSSGNTPLMYACAGGHEA----VVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       205 --~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~----~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                        +++.+.+.|..++...  ..+.+...++.|+.+    +++.+.+.|..++..  ...+.+...++.|..+-+..+++.
T Consensus       492 ~~vf~eM~~~Gv~PdvvT--ynaLI~gy~k~G~~eeAl~lf~~M~~~Gv~PD~v--TYnsLI~a~~k~G~~deA~~lf~e  567 (1060)
T PLN03218        492 FEVFHEMVNAGVEANVHT--FGALIDGCARAGQVAKAFGAYGIMRSKNVKPDRV--VFNALISACGQSGAVDRAFDVLAE  567 (1060)
T ss_pred             HHHHHHHHHcCCCCCHHH--HHHHHHHHHHCcCHHHHHHHHHHHHHcCCCCCHH--HHHHHHHHHHHCCCHHHHHHHHHH
Confidence              3444445555544321  123344445556653    334444555555432  122345556666766655544432


Q ss_pred             ------CCCCcccCcCccCCHHHHHHHcCCHHHHHHH----HHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHH
Q psy903          279 ------GAGINTHSNEFKESALTLACYKGHLDMVRFL----LSAGADQEHKTDEMHTALMEASMDGHVEVAKLL  342 (739)
Q Consensus       279 ------~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L----l~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L  342 (739)
                            |..++.   ..-.+.+...++.|+.+-+..+    .+.|..++..  ...+.+...++.|..+-+..+
T Consensus       568 M~~~~~gi~PD~---vTynaLI~ay~k~G~ldeA~elf~~M~e~gi~p~~~--tynsLI~ay~k~G~~deAl~l  636 (1060)
T PLN03218        568 MKAETHPIDPDH---ITVGALMKACANAGQVDRAKEVYQMIHEYNIKGTPE--VYTIAVNSCSQKGDWDFALSI  636 (1060)
T ss_pred             HHHhcCCCCCcH---HHHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCChH--HHHHHHHHHHhcCCHHHHHHH
Confidence                  111111   1122445555666665544333    3334333211  112334445556665444333

>PLN03218 maturation of RBCL 1; Provisional

Probab=87.76  E-value=14  Score=42.83  Aligned_cols=203  Identities=13%  Similarity=0.088  Sum_probs=99.0

Q ss_pred             HHHHHHcCCHHHHHHHHhc------CCCCCcCCCCCCcHHHHHHHcCcHHHHH----HHHhCCCCccccCCCCCC-cHHH
Q psy903          127 LVQACSDGDVKTVKKLLTE------GRSVHETTDEGESLLSLACSAGYYELAQ----VLLAMHANVEDRGIKGEC-TPLM  195 (739)
Q Consensus       127 l~~A~~~~~~~~~~~ll~~------~~~~~~~~~~g~t~L~~A~~~~~~~~v~----~Ll~~~~~~~~~~~~~~~-t~L~  195 (739)
                      +...++.|+.+....+++.      |..++..  ...+.+...+..|+++-+.    .+.+.+..++...    + +.+.
T Consensus       549 I~a~~k~G~~deA~~lf~eM~~~~~gi~PD~v--TynaLI~ay~k~G~ldeA~elf~~M~e~gi~p~~~t----ynsLI~  622 (1060)
T PLN03218        549 ISACGQSGAVDRAFDVLAEMKAETHPIDPDHI--TVGALMKACANAGQVDRAKEVYQMIHEYNIKGTPEV----YTIAVN  622 (1060)
T ss_pred             HHHHHHCCCHHHHHHHHHHHHHhcCCCCCcHH--HHHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCChHH----HHHHHH
Confidence            4445567777665555432      2333221  1234566667777766443    3344443332211    2 3444


Q ss_pred             HHHHcCcHH----HHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHH----HHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          196 EAASSGFIE----IVRLLINHGADVNGQSSSGNTPLMYACAGGHEA----VVRVLLECGANVEDHNENGHTPLMEAASAG  267 (739)
Q Consensus       196 ~A~~~~~~~----~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~----~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~  267 (739)
                      ..++.|+.+    +++.+.+.|..++...  -.+.+...+..|+.+    +++.+.+.|..++..  ...+.+...++.|
T Consensus       623 ay~k~G~~deAl~lf~eM~~~Gv~PD~~T--ynsLI~a~~k~G~~eeA~~l~~eM~k~G~~pd~~--tynsLI~ay~k~G  698 (1060)
T PLN03218        623 SCSQKGDWDFALSIYDDMKKKGVKPDEVF--FSALVDVAGHAGDLDKAFEILQDARKQGIKLGTV--SYSSLMGACSNAK  698 (1060)
T ss_pred             HHHhcCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHhCCCHHHHHHHHHHHHHcCCCCCHH--HHHHHHHHHHhCC
Confidence            455667644    4455556676664321  123445555666654    444445556555432  1234556667777


Q ss_pred             ChHHHHHHHH----cCCCCcccCcCccCCHHHHHHHcCCHHHH----HHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHH
Q psy903          268 HVGVAKILLE----YGAGINTHSNEFKESALTLACYKGHLDMV----RFLLSAGADQEHKTDEMHTALMEASMDGHVEVA  339 (739)
Q Consensus       268 ~~~ii~~Ll~----~~~~~~~~~~~~~~~~l~~A~~~~~~~~v----~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~  339 (739)
                      ..+-+..+++    .|..++...   -.+.+...++.|+.+-+    +.+.+.|..++...  ..+.+......|..+..
T Consensus       699 ~~eeA~~lf~eM~~~g~~Pdvvt---yN~LI~gy~k~G~~eeAlelf~eM~~~Gi~Pd~~T--y~sLL~a~~k~G~le~A  773 (1060)
T PLN03218        699 NWKKALELYEDIKSIKLRPTVST---MNALITALCEGNQLPKALEVLSEMKRLGLCPNTIT--YSILLVASERKDDADVG  773 (1060)
T ss_pred             CHHHHHHHHHHHHHcCCCCCHHH---HHHHHHHHHHCCCHHHHHHHHHHHHHcCCCCCHHH--HHHHHHHHHHCCCHHHH
Confidence            7665555543    333332211   12344455567765533    33444555544322  12344445566776655


Q ss_pred             HHHHH
Q psy903          340 KLLLD  344 (739)
Q Consensus       340 ~~L~~  344 (739)
                      ..+++
T Consensus       774 ~~l~~  778 (1060)
T PLN03218        774 LDLLS  778 (1060)
T ss_pred             HHHHH
Confidence            55444

>PLN03081 pentatricopeptide (PPR) repeat-containing protein; Provisional

Probab=83.80  E-value=79  Score=35.33  Aligned_cols=129  Identities=12%  Similarity=0.099  Sum_probs=57.9

Q ss_pred             HHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHH-HHHHcCcH----HHHHHHHHCCC
Q psy903          140 KKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM-EAASSGFI----EIVRLLINHGA  214 (739)
Q Consensus       140 ~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~-~A~~~~~~----~~~~~Ll~~g~  214 (739)
                      ..+.+.|..++..  .....+...+..|.++-+..+.+.-..++...    ++.+. ..+..|..    ++++.+.+.|.
T Consensus       147 ~~m~~~g~~~~~~--~~n~Li~~y~k~g~~~~A~~lf~~m~~~~~~t----~n~li~~~~~~g~~~~A~~lf~~M~~~g~  220 (697)
T PLN03081        147 WHVESSGFEPDQY--MMNRVLLMHVKCGMLIDARRLFDEMPERNLAS----WGTIIGGLVDAGNYREAFALFREMWEDGS  220 (697)
T ss_pred             HHHHHhCCCcchH--HHHHHHHHHhcCCCHHHHHHHHhcCCCCCeee----HHHHHHHHHHCcCHHHHHHHHHHHHHhCC
Confidence            3334455554432  22345666666777776666666544432221    23333 33445553    33444445555


Q ss_pred             CCCCCCCCCCcHHHHHHhcCcHHHHHH----HHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          215 DVNGQSSSGNTPLMYACAGGHEAVVRV----LLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       215 ~~~~~~~~~~t~L~~A~~~~~~~~v~~----Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                      .++....  .+.|...+..|..+..+.    ..+.|..++..  -..+.+...++.|..+-+..+++.
T Consensus       221 ~p~~~t~--~~ll~a~~~~~~~~~~~~l~~~~~~~g~~~d~~--~~n~Li~~y~k~g~~~~A~~vf~~  284 (697)
T PLN03081        221 DAEPRTF--VVMLRASAGLGSARAGQQLHCCVLKTGVVGDTF--VSCALIDMYSKCGDIEDARCVFDG  284 (697)
T ss_pred             CCChhhH--HHHHHHHhcCCcHHHHHHHHHHHHHhCCCccce--eHHHHHHHHHHCCCHHHHHHHHHh
Confidence            4432211  122233333444433333    23444433221  122345555566666666555554

>PLN03077 Protein ECB2; Provisional

Probab=83.59  E-value=91  Score=35.91  Aligned_cols=122  Identities=11%  Similarity=0.107  Sum_probs=54.4

Q ss_pred             HHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCC-CCCCCC-cHHHHHHHcCCHHH----HHHHhhCCCCCCcC
Q psy903          546 RYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYG-ANLDNS-TMLIEAAKGGHANV----VQLLLDFPRSVHAK  619 (739)
Q Consensus       546 ~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~-~~~~~~-~~l~~A~~~~~~~~----v~~L~~~~~~~~~~  619 (739)
                      .++++.|...+..  .+...+..-++.|+.+-...+++.. .+.... +.+...+..|..+-    ++.+.+.|..++  
T Consensus       513 ~~~~~~g~~~~~~--~~naLi~~y~k~G~~~~A~~~f~~~~~d~~s~n~lI~~~~~~G~~~~A~~lf~~M~~~g~~Pd--  588 (857)
T PLN03077        513 AHVLRTGIGFDGF--LPNALLDLYVRCGRMNYAWNQFNSHEKDVVSWNILLTGYVAHGKGSMAVELFNRMVESGVNPD--  588 (857)
T ss_pred             HHHHHhCCCccce--echHHHHHHHHcCCHHHHHHHHHhcCCChhhHHHHHHHHHHcCCHHHHHHHHHHHHHcCCCCC--
Confidence            3334445544332  2334556666667665544444332 122222 33444456666543    333334444332  


Q ss_pred             CCCCCcHHHHHH-HcCCHHHHHHHH-----HcCCCCCCc---hHHHHHHhCCChhHHHHHhc
Q psy903          620 TQTGDTALTYAC-ENGHTDVADLLL-----SYGANLDNS---TMLIEAAKGGHANVVQLLLD  672 (739)
Q Consensus       620 ~~~g~t~l~~A~-~~~~~~~v~~L~-----~~~~~~~~~---~~L~~A~~~g~~~~v~~L~~  672 (739)
                       ..-.+.+..|+ ..|..+-...++     ++|..++-.   ..++.-.+.|+++-..-+++
T Consensus       589 -~~T~~~ll~a~~~~g~v~ea~~~f~~M~~~~gi~P~~~~y~~lv~~l~r~G~~~eA~~~~~  649 (857)
T PLN03077        589 -EVTFISLLCACSRSGMVTQGLEYFHSMEEKYSITPNLKHYACVVDLLGRAGKLTEAYNFIN  649 (857)
T ss_pred             -cccHHHHHHHHhhcChHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHhCCCHHHHHHHHH
Confidence             22233343343 445544333332     233333211   23455567777776666655

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	739
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		1e-27
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		1e-25
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		4e-19
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		2e-10
1n11_A	437	D34 Region Of Human Ankyrin-R And Linker Length = 4		9e-06
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		2e-23
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		1e-21
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		2e-19
1n0r_A	126	4ank: A Designed Ankyrin Repeat Protein With Four I		1e-11
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-21
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-21
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-18
4hqd_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-12
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		3e-21
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		2e-16
2xeh_A	157	Structural Determinants For Improved Thermal Stabil		8e-08
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		4e-21
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-21
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		3e-20
4gpm_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-13
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		4e-21
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		6e-19
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		3e-15
1mj0_A	166	Sank E3_5: An Artificial Ankyrin Repeat Protein Len		1e-05
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		5e-21
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		8e-19
4gmr_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-12
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		1e-20
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		4e-15
4f6r_D	169	Tubulin:stathmin-Like Domain Complex Length = 169		4e-06
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		1e-20
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		3e-17
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		4e-14
2j8s_D	169	Drug Export Pathway Of Multidrug Exporter Acrb Reve		2e-06
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-20
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		1e-19
4hb5_A	169	Crystal Structure Of Engineered Protein. Northeast		2e-13
2xee_A	157	Structural Determinants For Improved Thermal Stabil		5e-20
2xee_A	157	Structural Determinants For Improved Thermal Stabil		3e-16
2xee_A	157	Structural Determinants For Improved Thermal Stabil		1e-07
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		5e-20
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		2e-16
2qyj_A	166	Crystal Structure Of A Designed Full Consensus Anky		1e-07
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		5e-20
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-17
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-15
3noc_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-05
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		6e-20
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		4e-16
2bkg_A	166	Crystal Structure Of E3_19 An Designed Ankyrin Repe		1e-08
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		1e-19
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		2e-12
4atz_D	154	Ad5 Knob In Complex With A Designed Ankyrin Repeat		3e-05
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		1e-19
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		4e-15
3zu7_B	169	Crystal Structure Of A Designed Selected Ankyrin Re		8e-07
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		1e-19
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		2e-13
3nog_D	169	Designed Ankyrin Repeat Protein (Darpin) Binders To		4e-05
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		2e-19
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		7e-19
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		2e-15
2p2c_P	169	Inhibition Of Caspase-2 By A Designed Ankyrin Repea		7e-08
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		4e-19
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		5e-18
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		3e-13
2y1l_E	169	Caspase-8 In Complex With Darpin-8.4 Length = 169		5e-05
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		5e-19
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-14
2v5q_C	167	Crystal Structure Of Wild-type Plk-1 Kinase Domain		3e-08
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		6e-19
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		3e-17
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		3e-14
2bkk_B	169	Crystal Structure Of Aminoglycoside Phosphotransfer		8e-08
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		1e-18
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		1e-12
4dui_A	169	Darpin D1 Binding To Tubulin Beta Chain (not In Com		2e-05
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		2e-18
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		1e-12
4drx_E	169	Gtp-Tubulin In Complex With A Darpin Length = 169		1e-05
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		2e-18
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		2e-13
1svx_A	169	Crystal Structure Of A Designed Selected Ankyrin Re		3e-06
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		1e-17
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		8e-13
3q9u_C	158	In Silico And In Vitro Co-Evolution Of A High Affin		3e-10
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		2e-17
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-14
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		1e-13
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		5e-12
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		8e-10
1n0q_A	93	3ank: A Designed Ankyrin Repeat Protein With Three		6e-06
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		2e-17
4b93_B	269	Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyri		2e-13
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		3e-17
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		3e-10
1wdy_A	285	Crystal Structure Of Ribonuclease Length = 285		2e-06
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		4e-17
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		1e-11
4g8k_A	337	Intact Sensor Domain Of Human Rnase L In The Inacti		5e-07
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		9e-17
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		2e-07
3hra_A	201	Crystal Structure Of Ef0377 An Ankyrin Repeat Prote		4e-05
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		2e-16
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		1e-11
2xzt_G	136	Caspase-3 In Complex With Darpin-3.4_i78s Length =		8e-06
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		2e-16
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		2e-11
2v4h_C	136	Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 13		1e-05
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		3e-16
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		3e-11
2y0b_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4_		2e-05
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		3e-16
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		3e-14
1qym_A	227	X-Ray Structure Of Human Gankyrin Length = 227		2e-09
1uoh_A	226	Human Gankyrin Length = 226		3e-16
1uoh_A	226	Human Gankyrin Length = 226		4e-14
1uoh_A	226	Human Gankyrin Length = 226		2e-09
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		4e-16
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		1e-11
2xzd_G	136	Caspase-3 In Complex With An Inhibitory Darpin-3.4		9e-06
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		9e-16
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		6e-13
2dvw_A	231	Structure Of The Oncoprotein Gankyrin In Complex Wi		8e-09
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		2e-15
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		1e-12
3aji_A	231	Structure Of Gankyrin-S6atpase Photo-Cross-Linked S		2e-08
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		3e-15
2jab_A	136	A Designed Ankyrin Repeat Protein Evolved To Picomo		1e-09
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		4e-15
3b7b_A	237	Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Le		2e-11
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		4e-15
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		8e-12
3zkj_A	261	Crystal Structure Of Ankyrin Repeat And Socs Box-co		2e-05
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		8e-15
3d9h_A	285	Crystal Structure Of The Splice Variant Of Human As		3e-11
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		2e-14
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		3e-09
4grg_A	135	Crystal Structure Of Ige Complexed With E2_79, An A		9e-09
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		3e-14
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		4e-12
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		4e-11
3zuv_B	136	Crystal Structure Of A Designed Selected Ankyrin Re		2e-05
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		5e-14
3eu9_A	240	The Ankyrin Repeat Domain Of Huntingtin Interacting		2e-08
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		6e-14
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		1e-10
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		9e-08
2l6b_A	115	Nrc Consensus Ankyrin Repeat Protein Solution Struc		2e-06
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		2e-13
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		5e-10
3hg0_D	136	Crystal Structure Of A Darpin In Complex With Orf49		4e-04
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		3e-13
3twq_A	175	Crystal Structure Of Arc4 From Human Tankyrase 2 (A		2e-12
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		3e-13
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		4e-12
3twu_A	167	Crystal Structure Of Arc4 From Human Tankyrase 2 In		8e-05
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		3e-13
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		4e-12
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		4e-12
3twr_A	165	Crystal Structure Of Arc4 From Human Tankyrase 2 In		8e-05
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		4e-13
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		2e-11
3v2o_A	183	Crystal Structure Of The Peptide Bound Complex Of T		3e-08
3so8_A	162	Crystal Structure Of Ankra Length = 162		4e-13
3so8_A	162	Crystal Structure Of Ankra Length = 162		2e-11
3so8_A	162	Crystal Structure Of Ankra Length = 162		3e-08
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		5e-13
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		2e-11
3v2x_A	167	Crystal Structure Of The Peptide Bound Complex Of T		3e-08
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		5e-13
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		1e-10
2rfm_A	192	Structure Of A Thermophilic Ankyrin Repeat Protein		3e-05
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		3e-12
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		7e-12
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		2e-09
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		5e-07
3utm_A	351	Crystal Structure Of A Mouse Tankyrase-Axin Complex		1e-05
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		2e-11
1awc_B	153	Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 1		2e-05
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		5e-11
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		1e-09
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		2e-07
3f6q_A	179	Crystal Structure Of Integrin-Linked Kinase Ankyrin		6e-04
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		8e-11
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		1e-09
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		2e-07
2kbx_A	171	Solution Structure Of Ilk-Pinch Complex Length = 17		5e-04
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		4e-10
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		3e-05
4hbd_A	276	Crystal Structure Of Kank2 Ankyrin Repeats Length =		3e-04
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		4e-10
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		3e-09
3v30_A	172	Crystal Structure Of The Peptide Bound Complex Of T		1e-07
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		5e-10
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		4e-09
3uxg_A	172	Crystal Structure Of Rfxank Length = 172		4e-07
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		1e-09
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		5e-08
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		3e-07
3c5r_A	137	Crystal Structure Of The Bard1 Ankyrin Repeat Domai		1e-04
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		2e-09
2he0_A	253	Crystal Structure Of A Human Notch1 Ankyrin Domain		2e-06
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		3e-09
1k1b_A	241	Crystal Structure Of The Ankyrin Repeat Domain Of B		3e-07
1ikn_D	236	IkappabalphaNF-Kappab Complex Length = 236		6e-09
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		6e-09
1yyh_A	253	Crystal Structure Of The Human Notch 1 Ankyrin Doma		4e-06
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		6e-09
2f8x_K	256	Crystal Structure Of Activated Notch, Csl And Maml		4e-06
1nfi_E	213	I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213		7e-09
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		1e-08
2qc9_A	210	Mouse Notch 1 Ankyrin Repeat Intracellular Domain L		1e-05
2xen_A	91	Structural Determinants For Improved Thermal Stabil		2e-08
2xen_A	91	Structural Determinants For Improved Thermal Stabil		1e-07
2xen_A	91	Structural Determinants For Improved Thermal Stabil		7e-06
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		2e-08
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		3e-08
2zgg_A	92	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		5e-07
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		2e-08
2f8y_A	223	Crystal Structure Of Human Notch1 Ankyrin Repeats T		3e-06
1ot8_A	239	Structure Of The Ankyrin Domain Of The Drosophila N		2e-08
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		3e-08
3ehq_A	222	Crystal Structure Of Human Osteoclast Stimulating F		2e-07
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		4e-08
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		6e-08
2zgd_A	110	Asn-Hydroxylation Stabilises The Ankyrin Repeat Dom		7e-07
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		4e-08
1s70_B	299	Complex Between Protein Ser/thr Phosphatase-1 (delt		7e-06
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		7e-08
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		3e-05
2dzn_A	228	Crystal Structure Analysis Of Yeast Nas6p Complexed		9e-05
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		7e-08
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		3e-05
1ixv_A	231	Crystal Structure Analysis Of Homolog Of Oncoprotei		9e-05
1blx_B	166	P19ink4dCDK6 COMPLEX Length = 166		3e-07
1bd8_A	156	Structure Of Cdk Inhibitor P19ink4d Length = 156		3e-07
1ap7_A	168	P19-Ink4d From Mouse, Nmr, 20 Structures Length = 1		3e-07
1bi8_B	166	Mechanism Of G1 Cyclin Dependent Kinase Inhibition		4e-07
1ycs_B	239	P53-53bp2 Complex Length = 239		1e-06
1ymp_A	135	The Crystal Structure Of A Partial Mouse Notch-1 An		2e-06
4a63_B	239	Crystal Structure Of The P73-Aspp2 Complex At 2.6a		2e-06
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		2e-06
1myo_A	118	Solution Structure Of Myotrophin, Nmr, 44 Structure		2e-05
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		2e-06
3aaa_C	123	Crystal Structure Of Actin Capping Protein In Compl		3e-05
2rfa_A	232	Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat		1e-05
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		2e-05
1mx2_A	168	Structure Of F71n Mutant Of P18ink4c Length = 168		9e-04
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		3e-05
1wg0_A	243	Structural Comparison Of Nas6p Protein Structures I		1e-04
2vge_A	229	Crystal Structure Of The C-Terminal Region Of Human		3e-05
1mx4_A	168	Structure Of P18ink4c (F82q) Length = 168		2e-04
1ihb_A	162	Crystal Structure Of P18-Ink4c(Ink6) Length = 162		2e-04
2fo1_E	373	Crystal Structure Of The Csl-Notch-Mastermind Terna		2e-04
1bu9_A	168	Solution Structure Of P18-Ink4c, 21 Structures Leng		2e-04
3t9k_A	390	Crystal Structure Of Acap1 C-portion Mutant S554d F		3e-04
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		3e-04
1mx6_A	168	Structure Of P18ink4c (F92n) Length = 168		5e-04
3jue_A	368	Crystal Structure Of Arfgap And Ank Repeat Domain O		3e-04
4f1p_A	368	Crystal Structure Of Mutant S554d For Arfgap And An		3e-04
1oy3_D	282	Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer		4e-04
1k3z_D	282	X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodi		4e-04
1dcq_A	278	Crystal Structure Of The Arf-Gap Domain And Ankyrin		8e-04

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  122 bits (305), Expect = 1e-27,   Method: Compositional matrix adjust.
 Identities = 127/427 (29%), Positives = 188/427 (44%), Gaps = 53/427 (12%)
Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
            TPL  A+  G + IV+ L+  GA  N  +    TPL  A   GH  V + LL+  A V 
Sbjct: 15  LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74
Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
              ++  TPL  AA  GH  + K+LLE  A  N  +     + L +A  +GH++ V  LL
Sbjct: 75  AKAKDDQTPLHCAARIGHTNMVKLLLENNANPNL-ATTAGHTPLHIAAREGHVETVLALL 133
Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSI 370
              A Q   T +  T L  A+  G V VA+LLL+  A   +A  ++   P          
Sbjct: 134 EKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHP-NAAGKNGLTP---------- 182
Query: 371 SYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 430
                  L  A    ++  VK LL  G S H     G + L +A      E+A+ LL   
Sbjct: 183 -------LHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYG 235
Query: 431 ANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAK 490
            +     ++G  TPL  AA  G    +   +S  A  +    +KS  GL    ++     
Sbjct: 236 GSANAESVQG-VTPLHLAAQEGHAEMVALLLSKQANGNL--GNKS--GLTPLHLV----- 285
Query: 491 INAHXXXXXXXXXXXXCCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRY 547
                              G + VAD L+K+G  ++       TPL  A+  G+++LV++
Sbjct: 286 ----------------AQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKF 329
Query: 548 LLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGH 602
           LL   A V+AKT+ G + L  A + GHTD+  LLL  GA+      D +T L  A + G+
Sbjct: 330 LLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGY 389
Query: 603 ANVVQLL 609
            +V  +L
Sbjct: 390 ISVTDVL 396

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score =  115 bits (287), Expect = 1e-25,   Method: Compositional matrix adjust.
 Identities = 131/426 (30%), Positives = 190/426 (44%), Gaps = 58/426 (13%)
Query: 258 TPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQE 317
           TPL  A+  GH+ + K LL+ GA  N  SN   E+ L +A   GH ++ ++LL   A   
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNV-SNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 74
Query: 318 HKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRS 377
            K  +  T L  A+  GH  + KLLL++ A                   P+  +      
Sbjct: 75  AKAKDDQTPLHCAARIGHTNMVKLLLENNAN------------------PNLATTAGHTP 116
Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 437
           L  A  +G V+TV  LL +  S    T +G + L +A   G   +A++LL   A+    G
Sbjct: 117 LHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAG 176
Query: 438 IKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHXXX 497
             G  TPL  A       NL + V         P+  + NG     I    AK N     
Sbjct: 177 KNG-LTPLHVAV---HHNNL-DIVKLLLPRGGSPHSPAWNGYTPLHI---AAKQNQ---- 224
Query: 498 XXXXXXXXXCCGGFLDVADFLLKNG--ANIE-LGASTPLMEAAQEGHLELVRYLLDSGAQ 554
                         ++VA  LL+ G  AN E +   TPL  AAQEGH E+V  LL   A 
Sbjct: 225 --------------VEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN 270
Query: 555 VHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTM-----LIEAAKGGHANVVQLL 609
            +   ++G T L    + GH  VAD+L+ +G  +D +T      L  A+  G+  +V+ L
Sbjct: 271 GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFL 330
Query: 610 LDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHA 664
           L     V+AKT+ G + L  A + GHTD+  LLL  GA+      D +T L  A + G+ 
Sbjct: 331 LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYI 390
Query: 665 NVVQLL 670
           +V  +L
Sbjct: 391 SVTDVL 396

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 102/371 (27%), Positives = 158/371 (42%), Gaps = 47/371 (12%)
Query: 385 GDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTP 444
           G +  VK LL  G S + +  + E+ L +A  AG+ E+A+ LL   A V  +  K + TP
Sbjct: 25  GHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA-KDDQTP 83
Query: 445 LMEAASSGR--------QCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHXX 496
           L  AA  G         + N N +++  A H           ++  + L+      A   
Sbjct: 84  LHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMT 143
Query: 497 XXXXXXXXXXCCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGA 553
                        G + VA+ LL+  A+         TPL  A    +L++V+ LL  G 
Sbjct: 144 KKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGG 203
Query: 554 QVHAKTQTGDTALTYACENGHTDVADLLLSYGAN-----LDNSTMLIEAAKGGHANVVQL 608
             H+    G T L  A +    +VA  LL YG +     +   T L  AA+ GHA +V L
Sbjct: 204 SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVAL 263
Query: 609 LLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTM-----LIEAAKGGH 663
           LL    + +   ++G T L    + GH  VAD+L+ +G  +D +T      L  A+  G+
Sbjct: 264 LLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGN 323
Query: 664 ANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQTGDTALTYACENGHTD 723
             +V+ LL                           ++ V+AKT+ G + L  A + GHTD
Sbjct: 324 IKLVKFLLQH-------------------------QADVNAKTKLGYSPLHQAAQQGHTD 358
Query: 724 VADLLLSYGAN 734
           +  LLL  GA+
Sbjct: 359 IVTLLLKNGAS 369

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 64.3 bits (155), Expect = 2e-10,   Method: Compositional matrix adjust.
 Identities = 55/152 (36%), Positives = 73/152 (48%), Gaps = 10/152 (6%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-- 588
           TPL  A+  GHL +V+ LL  GA  +      +T L  A   GHT+VA  LL   A +  
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 75
Query: 589 ---DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
              D+ T L  AA+ GH N+V+LLL+   + +  T  G T L  A   GH +    LL  
Sbjct: 76  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 135
Query: 646 GANL-----DNSTMLIEAAKGGHANVVQLLLD 672
            A+         T L  AAK G   V +LLL+
Sbjct: 136 EASQACMTKKGFTPLHVAAKYGKVRVAELLLE 167

>pdb|1N11|A Chain A, D34 Region Of Human Ankyrin-R And Linker Length = 437

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 54/181 (29%), Positives = 75/181 (41%), Gaps = 35/181 (19%)
Query: 564 TALTYACENGHTDVADLLLSYGANLDNSTMLIE-----AAKGGHANVVQLLLDFPRSVHA 618
           T L  A   GH  +   LL  GA+ + S + +E     AA+ GH  V + LL     V+A
Sbjct: 16  TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 75
Query: 619 KTQTGDTALTYACENGHTDVADLLLSYGANLDNSTM-----LIEAAKGGHANVVQLLLDF 673
           K +   T L  A   GHT++  LLL   AN + +T      L  AA+ GH   V  LL+ 
Sbjct: 76  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLE- 134
Query: 674 PRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGA 733
                                   K++     T+ G T L  A + G   VA+LLL   A
Sbjct: 135 ------------------------KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDA 170
Query: 734 N 734
           +
Sbjct: 171 H 171

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score =  107 bits (268), Expect = 2e-23,   Method: Compositional matrix adjust.
 Identities = 59/123 (47%), Positives = 80/123 (65%), Gaps = 1/123 (0%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           TPL  AA +G +E+V+LL+  GADVN +  +G TPL  A   GH  VV++LLE GA+V  
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
            ++NG TPL  AA  GH+ V K+LLE GA +N   ++   + L LA   GHL++V+ LL 
Sbjct: 64  KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLE 122
Query: 312 AGA 314
           AGA
Sbjct: 123 AGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score =  101 bits (252), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/126 (46%), Positives = 79/126 (62%), Gaps = 1/126 (0%)
Query: 222 SGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
           +G TPL  A   GH  VV++LLE GA+V   ++NG TPL  AA  GH+ V K+LLE GA 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKL 341
           +N   ++   + L LA   GHL++V+ LL AGAD   K     T L  A+ +GH+EV KL
Sbjct: 61  VNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 119
Query: 342 LLDSGA 347
           LL++GA
Sbjct: 120 LLEAGA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 94.7 bits (234), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 57/122 (46%), Positives = 74/122 (60%), Gaps = 5/122 (4%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-- 588
           TPL  AA+ GHLE+V+ LL++GA V+AK + G T L  A  NGH +V  LLL  GA++  
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 589 ---DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
              +  T L  AA+ GH  VV+LLL+    V+AK + G T L  A  NGH +V  LLL  
Sbjct: 64  KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123
Query: 646 GA 647
           GA
Sbjct: 124 GA 125

>pdb|1N0R|A Chain A, 4ank: A Designed Ankyrin Repeat Protein With Four Identical Consensus Repeats Length = 126

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 54/150 (36%), Positives = 71/150 (47%), Gaps = 30/150 (20%)
Query: 589 DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
           +  T L  AA+ GH  VV+LLL+    V+AK + G T L  A  NGH +V  LLL  GA+
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 649 L-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVH 703
           +     +  T L  AA+ GH  VV+LLL+                           + V+
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEA-------------------------GADVN 95
Query: 704 AKTQTGDTALTYACENGHTDVADLLLSYGA 733
           AK + G T L  A  NGH +V  LLL  GA
Sbjct: 96  AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 91/158 (57%), Gaps = 1/158 (0%)
Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184
           + L++A  +G+   VK L+  G  V+ +  +G + L  A   G+ E+ ++L++  A+V  
Sbjct: 6   KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNA 65
Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
           +   G  TPL  AA  G  EIV+LLI+ GADVN + S G TPL YA   GH+ +V++L+ 
Sbjct: 66  KDSDGR-TPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVKLLIS 124
Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGI 282
            GA+V   + +G TPL  A   G+  + K+L + G  +
Sbjct: 125 KGADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQGGWL 162

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 88/153 (57%), Gaps = 1/153 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + V+ LI +GADVN   S G TPL YA   GH+ +V++L+  GA+V   +
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKD 67
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
            +G TPL  AA  GH  + K+L+  GA +N   ++ + + L  A  +GH ++V+ L+S G
Sbjct: 68  SDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGR-TPLHYAAKEGHKEIVKLLISKG 126
Query: 314 ADQEHKTDEMHTALMEASMDGHVEVAKLLLDSG 346
           AD      +  T L  A   G+ E+ KLL   G
Sbjct: 127 ADVNTSDSDGRTPLDLAREHGNEEIVKLLEKQG 159

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 89/155 (57%), Gaps = 12/155 (7%)
Query: 526 ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYG 585
           ELG    L+EAA+ G+ + V+ L+++GA V+A    G T L YA + GH ++  LL+S G
Sbjct: 3   ELGKR--LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKG 60
Query: 586 ANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVAD 640
           A++     D  T L  AAK GH  +V+LL+     V+AK   G T L YA + GH ++  
Sbjct: 61  ADVNAKDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKDSDGRTPLHYAAKEGHKEIVK 120
Query: 641 LLLSYGANL-----DNSTMLIEAAKGGHANVVQLL 670
           LL+S GA++     D  T L  A + G+  +V+LL
Sbjct: 121 LLISKGADVNTSDSDGRTPLDLAREHGNEEIVKLL 155

>pdb|4HQD|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or265. Length = 169

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 49/147 (33%), Positives = 73/147 (49%), Gaps = 30/147 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---- 649
           LIEAA+ G+ + V+ L++    V+A    G T L YA + GH ++  LL+S GA++    
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHYAAKEGHKEIVKLLISKGADVNAKD 67
Query: 650 -DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
            D  T L  AAK GH  +V+LL+                          K + V+AK   
Sbjct: 68  SDGRTPLHYAAKEGHKEIVKLLI-------------------------SKGADVNAKDSD 102
Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
           G T L YA + GH ++  LL+S GA++
Sbjct: 103 GRTPLHYAAKEGHKEIVKLLISKGADV 129

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score =  100 bits (249), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 62/159 (38%), Positives = 92/159 (57%), Gaps = 3/159 (1%)
Query: 154 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG 213
           D G+ LL  A  AG  +  ++L+A  A+V  +   G  TPL  AA  G +EIV +L+  G
Sbjct: 1   DLGKKLLE-AARAGQDDEVRILMANGADVNAKDKDG-YTPLHLAAREGHLEIVEVLLKAG 58
Query: 214 ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAK 273
           ADVN +   G TPL  A   GH  +V VLL+ GA+V   +++G+TPL  AA  GH+ + +
Sbjct: 59  ADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVE 118
Query: 274 ILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312
           +LL+ GA +N   ++F ++   LA  +GH D+   L  A
Sbjct: 119 VLLKAGADVNA-QDKFGKTPFDLAIREGHEDIAEVLQKA 156

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 77/134 (57%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +    TPL  AA+EGHLE+V  LL +GA V+AK + G T L  A   G
Sbjct: 20  ILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREG 79
Query: 574 HTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL  GA++     D  T L  AA+ GH  +V++LL     V+A+ + G T   
Sbjct: 80  HLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFD 139
Query: 629 YACENGHTDVADLL 642
            A   GH D+A++L
Sbjct: 140 LAIREGHEDIAEVL 153

>pdb|2XEH|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 34/154 (22%)
Query: 589 DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
           D    L+EAA+ G  + V++L+     V+AK + G T L  A   GH ++ ++LL  GA+
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 60
Query: 649 L-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSG-- 701
           +     D  T L  AA+ GH  +V++LL                           K+G  
Sbjct: 61  VNAKDKDGYTPLHLAAREGHLEIVEVLL---------------------------KAGAD 93
Query: 702 VHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
           V+AK + G T L  A   GH ++ ++LL  GA++
Sbjct: 94  VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADV 127

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score =  100 bits (248), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 57/158 (36%), Positives = 92/158 (58%), Gaps = 1/158 (0%)
Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184
           + L++A  +G+   VK L+  G  V+ +  +G + L  A   G+ E+ ++L++  A+V  
Sbjct: 6   KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNA 65
Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
           +   G  TPL  AA +G  E+V+LLI+ GADVN + S G TPL +A   GH+ VV++L+ 
Sbjct: 66  KDSDGR-TPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLIS 124
Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGI 282
            GA+V   + +G TPL  A   G+  V K+L + G  +
Sbjct: 125 KGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWL 162

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 61/153 (39%), Positives = 87/153 (56%), Gaps = 1/153 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + V+ LI +GADVN   S G TPL +A   GH+ VV++L+  GA+V   +
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD 67
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
            +G TPL  AA  GH  V K+L+  GA +N   ++ + + L  A   GH ++V+ L+S G
Sbjct: 68  SDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGR-TPLHHAAENGHKEVVKLLISKG 126
Query: 314 ADQEHKTDEMHTALMEASMDGHVEVAKLLLDSG 346
           AD      +  T L  A   G+ EV KLL   G
Sbjct: 127 ADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQG 159

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 97.1 bits (240), Expect = 3e-20,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 91/155 (58%), Gaps = 12/155 (7%)
Query: 526 ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYG 585
           ELG    L+EAA+ G+ + V+ L+++GA V+A    G T L +A ENGH +V  LL+S G
Sbjct: 3   ELGKR--LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKG 60
Query: 586 ANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVAD 640
           A++     D  T L  AA+ GH  VV+LL+     V+AK   G T L +A ENGH +V  
Sbjct: 61  ADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVK 120
Query: 641 LLLSYGANL-----DNSTMLIEAAKGGHANVVQLL 670
           LL+S GA++     D  T L  A + G+  VV+LL
Sbjct: 121 LLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLL 155

>pdb|4GPM|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or264. Length = 169

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 53/147 (36%), Positives = 75/147 (51%), Gaps = 30/147 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---- 649
           LIEAA+ G+ + V+ L++    V+A    G T L +A ENGH +V  LL+S GA++    
Sbjct: 8   LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKD 67
Query: 650 -DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
            D  T L  AA+ GH  VV+LL+                          K + V+AK   
Sbjct: 68  SDGRTPLHHAAENGHKEVVKLLI-------------------------SKGADVNAKDSD 102
Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
           G T L +A ENGH +V  LL+S GA++
Sbjct: 103 GRTPLHHAAENGHKEVVKLLISKGADV 129

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 99.8 bits (247), Expect = 4e-21,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 96/157 (61%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V      G  TPL  AAS+G +EIV +L+ +
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNATDNDG-YTPLHLAASNGHLEIVEVLLKN 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN    +G TPL  A A GH  +V VLL+ GA+V  ++ +GHTPL  AA  GH+ + 
Sbjct: 70  GADVNASDLTGITPLHLAAATGHLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL++GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKHGADVNA-QDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 93/150 (62%), Gaps = 3/150 (2%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADVN   + G TPL  A + GH  +V VLL+ GA+V   +
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASD 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
             G TPL  AA+ GH+ + ++LL++GA +N + N+   + L LA   GHL++V  LL  G
Sbjct: 78  LTGITPLHLAAATGHLEIVEVLLKHGADVNAYDND-GHTPLHLAAKYGHLEIVEVLLKHG 136
Query: 314 ADQEHKTDEMHTALMEASMD-GHVEVAKLL 342
           AD  +  D+      + S+D G+ ++A++L
Sbjct: 137 ADV-NAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 80.5 bits (197), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 78/134 (58%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +    TPL  AA  GHLE+V  LL +GA V+A   TG T L  A   G
Sbjct: 32  ILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASDLTGITPLHLAAATG 91
Query: 574 HTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL +GA++     D  T L  AAK GH  +V++LL     V+A+ + G TA  
Sbjct: 92  HLEIVEVLLKHGADVNAYDNDGHTPLHLAAKYGHLEIVEVLLKHGADVNAQDKFGKTAFD 151
Query: 629 YACENGHTDVADLL 642
            + +NG+ D+A++L
Sbjct: 152 ISIDNGNEDLAEIL 165

>pdb|1MJ0|A Chain A, Sank E3_5: An Artificial Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 69/148 (46%), Gaps = 30/148 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 652
           L+EAA+ G  + V++L+     V+A    G T L  A  NGH ++ ++LL  GA+++ S 
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDNDGYTPLHLAASNGHLEIVEVLLKNGADVNASD 77
Query: 653 ----TMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
               T L  AA  GH  +V++LL                            + V+A    
Sbjct: 78  LTGITPLHLAAATGHLEIVEVLLKH-------------------------GADVNAYDND 112
Query: 709 GDTALTYACENGHTDVADLLLSYGANLR 736
           G T L  A + GH ++ ++LL +GA++ 
Sbjct: 113 GHTPLHLAAKYGHLEIVEVLLKHGADVN 140

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 99.8 bits (247), Expect = 5e-21,   Method: Compositional matrix adjust.
 Identities = 64/153 (41%), Positives = 85/153 (55%), Gaps = 1/153 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + V+ L+ +GADVN   S G TPL  A   GH+ VV++LL  GA+    +
Sbjct: 8   LIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKD 67
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
            +G TPL  AA  GH  V K+LL  GA  N   ++ K + L LA   GH ++V+ LLS G
Sbjct: 68  SDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGK-TPLHLAAENGHKEVVKLLLSQG 126
Query: 314 ADQEHKTDEMHTALMEASMDGHVEVAKLLLDSG 346
           AD      +  T L  A   G+ EV KLL   G
Sbjct: 127 ADPNTSDSDGRTPLDLAREHGNEEVVKLLEKQG 159

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 92.4 bits (228), Expect = 8e-19,   Method: Compositional matrix adjust.
 Identities = 68/155 (43%), Positives = 86/155 (55%), Gaps = 12/155 (7%)
Query: 526 ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYG 585
           ELG    L+EAA+ G+ + V+ LL++GA V+A    G T L  A ENGH +V  LLLS G
Sbjct: 3   ELGKR--LIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQG 60
Query: 586 ANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVAD 640
           A+      D  T L  AA+ GH  VV+LLL      +AK   G T L  A ENGH +V  
Sbjct: 61  ADPNAKDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKDSDGKTPLHLAAENGHKEVVK 120
Query: 641 LLLSYGANL-----DNSTMLIEAAKGGHANVVQLL 670
           LLLS GA+      D  T L  A + G+  VV+LL
Sbjct: 121 LLLSQGADPNTSDSDGRTPLDLAREHGNEEVVKLL 155

>pdb|4GMR|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or266. Length = 169

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 57/146 (39%), Positives = 71/146 (48%), Gaps = 30/146 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---- 649
           LIEAA+ G+ + V+ LL+    V+A    G T L  A ENGH +V  LLLS GA+     
Sbjct: 8   LIEAAENGNKDRVKDLLENGADVNASDSDGKTPLHLAAENGHKEVVKLLLSQGADPNAKD 67
Query: 650 -DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
            D  T L  AA+ GH  VV+LLL                        QG  +  +AK   
Sbjct: 68  SDGKTPLHLAAENGHKEVVKLLL-----------------------SQG--ADPNAKDSD 102
Query: 709 GDTALTYACENGHTDVADLLLSYGAN 734
           G T L  A ENGH +V  LLLS GA+
Sbjct: 103 GKTPLHLAAENGHKEVVKLLLSQGAD 128

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 92/157 (58%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V      G+ TPL  AA  G +EIV +L+ H
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNAEDDSGK-TPLHLAAIKGHLEIVEVLLKH 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN     G+TPL  A   GH  +V VLL+ GA+V   +  G TPL  AA AGH+ + 
Sbjct: 70  GADVNAADKMGDTPLHLAALYGHLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL+YGA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKYGADVNA-QDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +    TPL  AA +GHLE+V  LL  GA V+A  + GDT L  A   G
Sbjct: 32  ILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAADKMGDTPLHLAALYG 91
Query: 574 HTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL  GA+++ +     T L  AA  GH  +V++LL +   V+A+ + G TA  
Sbjct: 92  HLEIVEVLLKNGADVNATDTYGFTPLHLAADAGHLEIVEVLLKYGADVNAQDKFGKTAFD 151
Query: 629 YACENGHTDVADLL 642
            + +NG+ D+A++L
Sbjct: 152 ISIDNGNEDLAEIL 165

>pdb|4F6R|D Chain D, Tubulin:stathmin-Like Domain Complex Length = 169

Iteration: 1
 Score = 50.1 bits (118), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 72/149 (48%), Gaps = 34/149 (22%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 650
           L+EAA+ G  + V++L+     V+A+  +G T L  A   GH ++ ++LL +GA+++   
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAEDDSGKTPLHLAAIKGHLEIVEVLLKHGADVNAAD 77
Query: 651 --NSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSG--VHAKT 706
               T L  AA  GH  +V++LL                           K+G  V+A  
Sbjct: 78  KMGDTPLHLAALYGHLEIVEVLL---------------------------KNGADVNATD 110
Query: 707 QTGDTALTYACENGHTDVADLLLSYGANL 735
             G T L  A + GH ++ ++LL YGA++
Sbjct: 111 TYGFTPLHLAADAGHLEIVEVLLKYGADV 139

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 98.6 bits (244), Expect = 1e-20,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 95/157 (60%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V    + G  TPL  AA  G +EIV +L+ +
Sbjct: 12  SDLGKKLLE-AARAGRDDEVRILMANGADVNAADVVG-WTPLHLAAYWGHLEIVEVLLKN 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN   + G+TPL  A   GH  +V VLL+ GA+V   ++NG TPL  AA+ GH+ + 
Sbjct: 70  GADVNAYDTLGSTPLHLAAHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL+YGA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKYGADVNA-QDKFGKTAFDISINNGNEDLAEIL 165

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 57/149 (38%), Positives = 88/149 (59%), Gaps = 1/149 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADVN     G TPL  A   GH  +V VLL+ GA+V  ++
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYD 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
             G TPL  AA  GH+ + ++LL+ GA +N   ++   + L LA  +GHL++V  LL  G
Sbjct: 78  TLGSTPLHLAAHFGHLEIVEVLLKNGADVNA-KDDNGITPLHLAANRGHLEIVEVLLKYG 136
Query: 314 ADQEHKTDEMHTALMEASMDGHVEVAKLL 342
           AD   +     TA   +  +G+ ++A++L
Sbjct: 137 ADVNAQDKFGKTAFDISINNGNEDLAEIL 165

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 52/138 (37%), Positives = 78/138 (56%), Gaps = 8/138 (5%)
Query: 513 DVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYA 569
           D    L+ NGA++   ++   TPL  AA  GHLE+V  LL +GA V+A    G T L  A
Sbjct: 28  DEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYDTLGSTPLHLA 87
Query: 570 CENGHTDVADLLLSYGANL----DNS-TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGD 624
              GH ++ ++LL  GA++    DN  T L  AA  GH  +V++LL +   V+A+ + G 
Sbjct: 88  AHFGHLEIVEVLLKNGADVNAKDDNGITPLHLAANRGHLEIVEVLLKYGADVNAQDKFGK 147
Query: 625 TALTYACENGHTDVADLL 642
           TA   +  NG+ D+A++L
Sbjct: 148 TAFDISINNGNEDLAEIL 165

>pdb|2J8S|D Chain D, Drug Export Pathway Of Multidrug Exporter Acrb Revealed By Darpin Inhibitors Length = 169

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 70/149 (46%), Gaps = 34/149 (22%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 650
           L+EAA+ G  + V++L+     V+A    G T L  A   GH ++ ++LL  GA+++   
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAADVVGWTPLHLAAYWGHLEIVEVLLKNGADVNAYD 77
Query: 651 --NSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSG--VHAKT 706
              ST L  AA  GH  +V++LL                           K+G  V+AK 
Sbjct: 78  TLGSTPLHLAAHFGHLEIVEVLL---------------------------KNGADVNAKD 110
Query: 707 QTGDTALTYACENGHTDVADLLLSYGANL 735
             G T L  A   GH ++ ++LL YGA++
Sbjct: 111 DNGITPLHLAANRGHLEIVEVLLKYGADV 139

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 97.8 bits (242), Expect = 2e-20,   Method: Compositional matrix adjust.
 Identities = 59/153 (38%), Positives = 84/153 (54%), Gaps = 1/153 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + V+ L+ +GAD N   S G TPL YA   GH+ +V++LL  GA+    +
Sbjct: 8   LIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKD 67
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
            +G TPL  AA  GH  + K+LL  GA  N   ++ + + L  A   GH ++V+ LLS G
Sbjct: 68  SDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGR-TPLHYAAENGHKEIVKLLLSKG 126
Query: 314 ADQEHKTDEMHTALMEASMDGHVEVAKLLLDSG 346
           AD      +  T L  A   G+ E+ KLL   G
Sbjct: 127 ADPNTSDSDGRTPLDLAREHGNEEIVKLLEKQG 159

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 65/155 (41%), Positives = 87/155 (56%), Gaps = 12/155 (7%)
Query: 526 ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYG 585
           ELG    L+EAA+ G+ + V+ LL++GA  +A    G T L YA ENGH ++  LLLS G
Sbjct: 3   ELGKR--LIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKG 60
Query: 586 ANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVAD 640
           A+      D  T L  AA+ GH  +V+LLL      +AK   G T L YA ENGH ++  
Sbjct: 61  ADPNAKDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKDSDGRTPLHYAAENGHKEIVK 120
Query: 641 LLLSYGANL-----DNSTMLIEAAKGGHANVVQLL 670
           LLLS GA+      D  T L  A + G+  +V+LL
Sbjct: 121 LLLSKGADPNTSDSDGRTPLDLAREHGNEEIVKLL 155

>pdb|4HB5|A Chain A, Crystal Structure Of Engineered Protein. Northeast Structural Genomics Consortium Target Or267. Length = 169

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 54/146 (36%), Positives = 71/146 (48%), Gaps = 30/146 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---- 649
           LIEAA+ G+ + V+ LL+     +A    G T L YA ENGH ++  LLLS GA+     
Sbjct: 8   LIEAAENGNKDRVKDLLENGADPNASDSDGRTPLHYAAENGHKEIVKLLLSKGADPNAKD 67
Query: 650 -DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
            D  T L  AA+ GH  +V+LLL                          K +  +AK   
Sbjct: 68  SDGRTPLHYAAENGHKEIVKLLL-------------------------SKGADPNAKDSD 102
Query: 709 GDTALTYACENGHTDVADLLLSYGAN 734
           G T L YA ENGH ++  LLLS GA+
Sbjct: 103 GRTPLHYAAENGHKEIVKLLLSKGAD 128

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/159 (38%), Positives = 91/159 (57%), Gaps = 3/159 (1%)
Query: 154 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG 213
           D G+ LL  A  AG  +  ++L+A  A+V  +   G  TPL  AA  G +EIV +L+  G
Sbjct: 1   DLGKKLLE-AARAGQDDEVRILMANGADVNAKDKDG-YTPLHLAAREGHLEIVEVLLKAG 58
Query: 214 ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAK 273
           ADVN +   G TPL  A   GH  +V VLL+ GA+V   +++G+TPL  AA  GH+ + +
Sbjct: 59  ADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVE 118
Query: 274 ILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312
           +LL+ GA +N   ++F ++   LA   G+ D+   L  A
Sbjct: 119 VLLKAGADVNA-QDKFGKTPFDLAIDNGNEDIAEVLQKA 156

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 79/134 (58%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +    TPL  AA+EGHLE+V  LL +GA V+AK + G T L  A   G
Sbjct: 20  ILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREG 79
Query: 574 HTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL  GA++     D  T L  AA+ GH  +V++LL     V+A+ + G T   
Sbjct: 80  HLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTPFD 139
Query: 629 YACENGHTDVADLL 642
            A +NG+ D+A++L
Sbjct: 140 LAIDNGNEDIAEVL 153

>pdb|2XEE|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module. Length = 157

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 34/154 (22%)
Query: 589 DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
           D    L+EAA+ G  + V++L+     V+AK + G T L  A   GH ++ ++LL  GA+
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 60
Query: 649 L-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSG-- 701
           +     D  T L  AA+ GH  +V++LL                           K+G  
Sbjct: 61  VNAKDKDGYTPLHLAAREGHLEIVEVLL---------------------------KAGAD 93
Query: 702 VHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
           V+AK + G T L  A   GH ++ ++LL  GA++
Sbjct: 94  VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADV 127

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 92/157 (58%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V  +   G  TPL  AA  G +EIV +L+  
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNAKDKDG-YTPLHLAAREGHLEIVEVLLKA 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN +   G TPL  A   GH  +V VLL+ GA+V   +++G+TPL  AA  GH+ + 
Sbjct: 70  GADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL+ GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKAGADVNAQ-DKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 52/134 (38%), Positives = 80/134 (59%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +    TPL  AA+EGHLE+V  LL +GA V+AK + G T L  A   G
Sbjct: 32  ILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAKDKDGYTPLHLAAREG 91
Query: 574 HTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL  GA++     D  T L  AA+ GH  +V++LL     V+A+ + G TA  
Sbjct: 92  HLEIVEVLLKAGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFD 151
Query: 629 YACENGHTDVADLL 642
            + +NG+ D+A++L
Sbjct: 152 ISIDNGNEDLAEIL 165

>pdb|2QYJ|A Chain A, Crystal Structure Of A Designed Full Consensus Ankyrin Length = 166

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 73/154 (47%), Gaps = 34/154 (22%)
Query: 589 DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
           D    L+EAA+ G  + V++L+     V+AK + G T L  A   GH ++ ++LL  GA+
Sbjct: 13  DLGKKLLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD 72
Query: 649 L-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSG-- 701
           +     D  T L  AA+ GH  +V++LL                           K+G  
Sbjct: 73  VNAKDKDGYTPLHLAAREGHLEIVEVLL---------------------------KAGAD 105
Query: 702 VHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
           V+AK + G T L  A   GH ++ ++LL  GA++
Sbjct: 106 VNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADV 139

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 96.3 bits (238), Expect = 5e-20,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V  R   G  TPL  AA  G +EIV +L+ +
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNARDFTG-WTPLHLAAHFGHLEIVEVLLKN 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN + S G TPL  A   GH  +V VLL+ GA+V   + +G TPL  AA  GH+ + 
Sbjct: 70  GADVNAKDSLGVTPLHLAARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL+ GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKNGADVNA-QDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/150 (39%), Positives = 91/150 (60%), Gaps = 3/150 (2%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADVN +  +G TPL  A   GH  +V VLL+ GA+V   +
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKD 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
             G TPL  AA  GH+ + ++LL+ GA +N  S+    + L LA  +GHL++V  LL  G
Sbjct: 78  SLGVTPLHLAARRGHLEIVEVLLKNGADVNA-SDSHGFTPLHLAAKRGHLEIVEVLLKNG 136
Query: 314 ADQEHKTDEMHTALMEASMD-GHVEVAKLL 342
           AD  +  D+      + S+D G+ ++A++L
Sbjct: 137 ADV-NAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 82.0 bits (201), Expect = 1e-15,   Method: Compositional matrix adjust.
 Identities = 53/138 (38%), Positives = 79/138 (57%), Gaps = 8/138 (5%)
Query: 513 DVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYA 569
           D    L+ NGA++   +    TPL  AA  GHLE+V  LL +GA V+AK   G T L  A
Sbjct: 28  DEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKDSLGVTPLHLA 87
Query: 570 CENGHTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGD 624
              GH ++ ++LL  GA+++ S     T L  AAK GH  +V++LL     V+A+ + G 
Sbjct: 88  ARRGHLEIVEVLLKNGADVNASDSHGFTPLHLAAKRGHLEIVEVLLKNGADVNAQDKFGK 147
Query: 625 TALTYACENGHTDVADLL 642
           TA   + +NG+ D+A++L
Sbjct: 148 TAFDISIDNGNEDLAEIL 165

>pdb|3NOC|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 71/149 (47%), Gaps = 34/149 (22%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 652
           L+EAA+ G  + V++L+     V+A+  TG T L  A   GH ++ ++LL  GA+++   
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNARDFTGWTPLHLAAHFGHLEIVEVLLKNGADVNAKD 77
Query: 653 ----TMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSG--VHAKT 706
               T L  AA+ GH  +V++LL                           K+G  V+A  
Sbjct: 78  SLGVTPLHLAARRGHLEIVEVLL---------------------------KNGADVNASD 110
Query: 707 QTGDTALTYACENGHTDVADLLLSYGANL 735
             G T L  A + GH ++ ++LL  GA++
Sbjct: 111 SHGFTPLHLAAKRGHLEIVEVLLKNGADV 139

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 96.3 bits (238), Expect = 6e-20,   Method: Compositional matrix adjust.
 Identities = 61/157 (38%), Positives = 92/157 (58%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V      G+ TPL  AA  G +EIV +L+ +
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNAEDTYGD-TPLHLAARVGHLEIVEVLLKN 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN    SG+TPL  A   GH  +V VLL+ GA+V   +  G TPL  AA  GH+ + 
Sbjct: 70  GADVNALDFSGSTPLHLAAKRGHLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL+YGA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKYGADVNAQ-DKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 81/134 (60%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +    TPL  AA+ GHLE+V  LL +GA V+A   +G T L  A + G
Sbjct: 32  ILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALDFSGSTPLHLAAKRG 91
Query: 574 HTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL YGA+++      ST L  AA  GH  +V++LL +   V+A+ + G TA  
Sbjct: 92  HLEIVEVLLKYGADVNADDTIGSTPLHLAADTGHLEIVEVLLKYGADVNAQDKFGKTAFD 151
Query: 629 YACENGHTDVADLL 642
            + +NG+ D+A++L
Sbjct: 152 ISIDNGNEDLAEIL 165

>pdb|2BKG|A Chain A, Crystal Structure Of E3_19 An Designed Ankyrin Repeat Protein Length = 166

Iteration: 1
 Score = 58.9 bits (141), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 72/147 (48%), Gaps = 30/147 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 650
           L+EAA+ G  + V++L+     V+A+   GDT L  A   GH ++ ++LL  GA+++   
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAEDTYGDTPLHLAARVGHLEIVEVLLKNGADVNALD 77
Query: 651 --NSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
              ST L  AAK GH  +V++LL +                          + V+A    
Sbjct: 78  FSGSTPLHLAAKRGHLEIVEVLLKY-------------------------GADVNADDTI 112
Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
           G T L  A + GH ++ ++LL YGA++
Sbjct: 113 GSTPLHLAADTGHLEIVEVLLKYGADV 139

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/150 (41%), Positives = 90/150 (60%), Gaps = 3/150 (2%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GAD N     G TPL  A A GH  +V VLL  GA+V   +
Sbjct: 6   LLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVD 65
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
            NG TPL  AAS GH+ + ++LL+YGA +N   +    + L LA Y GHL++V  LL  G
Sbjct: 66  TNGTTPLHLAASLGHLEIVEVLLKYGADVNA-KDATGITPLYLAAYWGHLEIVEVLLKHG 124
Query: 314 ADQEHKTDEMHTALMEASMD-GHVEVAKLL 342
           AD  +  D+      + S+D G+ ++A++L
Sbjct: 125 ADV-NAQDKFGKTAFDISIDIGNEDLAEIL 153

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 71.2 bits (173), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 517 FLLKNGAN---IELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA+    +    TPL  AA  GHLE+V  LL +GA V+A    G T L  A   G
Sbjct: 20  ILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVDTNGTTPLHLAASLG 79
Query: 574 HTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL YGA+++       T L  AA  GH  +V++LL     V+A+ + G TA  
Sbjct: 80  HLEIVEVLLKYGADVNAKDATGITPLYLAAYWGHLEIVEVLLKHGADVNAQDKFGKTAFD 139
Query: 629 YACENGHTDVADLL 642
            + + G+ D+A++L
Sbjct: 140 ISIDIGNEDLAEIL 153

>pdb|4ATZ|D Chain D, Ad5 Knob In Complex With A Designed Ankyrin Repeat Protein Length = 154

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 69/147 (46%), Gaps = 30/147 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---- 649
           L+EAA+ G  + V++L+      +A    G T L  A   GH ++ ++LL  GA++    
Sbjct: 6   LLEAARAGQDDEVRILMANGADANAYDHYGRTPLHMAAAVGHLEIVEVLLRNGADVNAVD 65
Query: 650 -DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
            + +T L  AA  GH  +V++LL +                          + V+AK  T
Sbjct: 66  TNGTTPLHLAASLGHLEIVEVLLKY-------------------------GADVNAKDAT 100
Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
           G T L  A   GH ++ ++LL +GA++
Sbjct: 101 GITPLYLAAYWGHLEIVEVLLKHGADV 127

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 95.1 bits (235), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V     +G  TPL  AA  G  EIV +L+ H
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNAHDDQG-STPLHLAAWIGHPEIVEVLLKH 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN + + G TPL  A   GH  +V VLL+ GA+V   +  G TPL  AA  GH+ + 
Sbjct: 70  GADVNARDTDGWTPLHLAADNGHLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL++GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKHGADVNA-QDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 51/134 (38%), Positives = 78/134 (58%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +   STPL  AA  GH E+V  LL  GA V+A+   G T L  A +NG
Sbjct: 32  ILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARDTDGWTPLHLAADNG 91
Query: 574 HTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL YGA+++       T L  AA  GH  +V++LL     V+A+ + G TA  
Sbjct: 92  HLEIVEVLLKYGADVNAQDAYGLTPLHLAADRGHLEIVEVLLKHGADVNAQDKFGKTAFD 151
Query: 629 YACENGHTDVADLL 642
            + +NG+ D+A++L
Sbjct: 152 ISIDNGNEDLAEIL 165

>pdb|3ZU7|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Map Kinase Erk2 Length = 169

Iteration: 1
 Score = 52.8 bits (125), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 41/147 (27%), Positives = 70/147 (47%), Gaps = 30/147 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---- 649
           L+EAA+ G  + V++L+     V+A    G T L  A   GH ++ ++LL +GA++    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAHDDQGSTPLHLAAWIGHPEIVEVLLKHGADVNARD 77
Query: 650 -DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
            D  T L  AA  GH  +V++LL +                          + V+A+   
Sbjct: 78  TDGWTPLHLAADNGHLEIVEVLLKY-------------------------GADVNAQDAY 112
Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
           G T L  A + GH ++ ++LL +GA++
Sbjct: 113 GLTPLHLAADRGHLEIVEVLLKHGADV 139

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 94.7 bits (234), Expect = 1e-19,   Method: Compositional matrix adjust.
 Identities = 62/157 (39%), Positives = 93/157 (59%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V      G  TPL  AA  G +EIV +L+ +
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNASDHVG-WTPLHLAAYFGHLEIVEVLLKN 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN   S G TPL  A   GH  VV VLL+ GA+V  ++ NG TPL  AA+ GH+ + 
Sbjct: 70  GADVNADDSLGVTPLHLAADRGHLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL++GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKHGADVNA-QDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 76/134 (56%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANIELG---ASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++        TPL  AA  GHLE+V  LL +GA V+A    G T L  A + G
Sbjct: 32  ILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADDSLGVTPLHLAADRG 91
Query: 574 HTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H +V ++LL  GA+++ +     T L  AA  GH  +V++LL     V+A+ + G TA  
Sbjct: 92  HLEVVEVLLKNGADVNANDHNGFTPLHLAANIGHLEIVEVLLKHGADVNAQDKFGKTAFD 151
Query: 629 YACENGHTDVADLL 642
            + +NG+ D+A++L
Sbjct: 152 ISIDNGNEDLAEIL 165

>pdb|3NOG|D Chain D, Designed Ankyrin Repeat Protein (Darpin) Binders To Acrb: Plasticity Of The Interface Length = 169

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 69/150 (46%), Gaps = 34/150 (22%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA--NLDN 651
           L+EAA+ G  + V++L+     V+A    G T L  A   GH ++ ++LL  GA  N D+
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNASDHVGWTPLHLAAYFGHLEIVEVLLKNGADVNADD 77
Query: 652 S---TMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSG--VHAKT 706
           S   T L  AA  GH  VV++LL                           K+G  V+A  
Sbjct: 78  SLGVTPLHLAADRGHLEVVEVLL---------------------------KNGADVNAND 110
Query: 707 QTGDTALTYACENGHTDVADLLLSYGANLR 736
             G T L  A   GH ++ ++LL +GA++ 
Sbjct: 111 HNGFTPLHLAANIGHLEIVEVLLKHGADVN 140

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 94.4 bits (233), Expect = 2e-19,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V      G  TPL  AA +G +EIV +L+ +
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNATDWLGH-TPLHLAAKTGHLEIVEVLLKY 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN   + G TPL  A   GH  +V VLL+ GA+V   +  G TPL  AA  GH+ + 
Sbjct: 70  GADVNAWDNYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL+YGA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKYGADVNA-QDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 92.4 bits (228), Expect = 7e-19,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 90/150 (60%), Gaps = 3/150 (2%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADVN     G+TPL  A   GH  +V VLL+ GA+V   +
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWD 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
             G TPL  AA  GH+ + ++LL++GA +N    E   + L LA Y GHL++V  LL  G
Sbjct: 78  NYGATPLHLAADNGHLEIVEVLLKHGADVNAKDYE-GFTPLHLAAYDGHLEIVEVLLKYG 136
Query: 314 ADQEHKTDEMHTALMEASMD-GHVEVAKLL 342
           AD  +  D+      + S+D G+ ++A++L
Sbjct: 137 ADV-NAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 80.9 bits (198), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 51/138 (36%), Positives = 80/138 (57%), Gaps = 8/138 (5%)
Query: 513 DVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYA 569
           D    L+ NGA++   +    TPL  AA+ GHLE+V  LL  GA V+A    G T L  A
Sbjct: 28  DEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWDNYGATPLHLA 87
Query: 570 CENGHTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGD 624
            +NGH ++ ++LL +GA+++       T L  AA  GH  +V++LL +   V+A+ + G 
Sbjct: 88  ADNGHLEIVEVLLKHGADVNAKDYEGFTPLHLAAYDGHLEIVEVLLKYGADVNAQDKFGK 147
Query: 625 TALTYACENGHTDVADLL 642
           TA   + +NG+ D+A++L
Sbjct: 148 TAFDISIDNGNEDLAEIL 165

>pdb|2P2C|P Chain P, Inhibition Of Caspase-2 By A Designed Ankyrin Repeat Protein (Darpin) Length = 169

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Compositional matrix adjust.
 Identities = 45/147 (30%), Positives = 72/147 (48%), Gaps = 30/147 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---D 650
           L+EAA+ G  + V++L+     V+A    G T L  A + GH ++ ++LL YGA++   D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDWLGHTPLHLAAKTGHLEIVEVLLKYGADVNAWD 77
Query: 651 N--STMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
           N  +T L  AA  GH  +V++LL                            + V+AK   
Sbjct: 78  NYGATPLHLAADNGHLEIVEVLLK-------------------------HGADVNAKDYE 112
Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
           G T L  A  +GH ++ ++LL YGA++
Sbjct: 113 GFTPLHLAAYDGHLEIVEVLLKYGADV 139

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 93.6 bits (231), Expect = 4e-19,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 92/157 (58%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V      G  TPL  AA +G +EIV +L+ +
Sbjct: 12  SDLGKKLLE-AARAGRDDEVRILMANGADVNAEDASG-WTPLHLAAFNGHLEIVEVLLKN 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN    +G TPL  A   GH  +V VLL+ GA+V  ++  GHTPL  AA  GH+ + 
Sbjct: 70  GADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL+ GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKNGADVNA-QDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 89.7 bits (221), Expect = 5e-18,   Method: Compositional matrix adjust.
 Identities = 60/150 (40%), Positives = 91/150 (60%), Gaps = 3/150 (2%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADVN + +SG TPL  A   GH  +V VLL+ GA+V   +
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
             G TPL  AA  GH+ + ++LL+ GA +N +  E   + L LA   GHL++V  LL  G
Sbjct: 78  HAGMTPLRLAALFGHLEIVEVLLKNGADVNANDME-GHTPLHLAAMFGHLEIVEVLLKNG 136
Query: 314 ADQEHKTDEMHTALMEASMD-GHVEVAKLL 342
           AD  +  D+      + S+D G+ ++A++L
Sbjct: 137 ADV-NAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 50/138 (36%), Positives = 77/138 (55%), Gaps = 8/138 (5%)
Query: 513 DVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYA 569
           D    L+ NGA++   +    TPL  AA  GHLE+V  LL +GA V+A    G T L  A
Sbjct: 28  DEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLA 87
Query: 570 CENGHTDVADLLLSYGANLDNSTM-----LIEAAKGGHANVVQLLLDFPRSVHAKTQTGD 624
              GH ++ ++LL  GA+++ + M     L  AA  GH  +V++LL     V+A+ + G 
Sbjct: 88  ALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGK 147
Query: 625 TALTYACENGHTDVADLL 642
           TA   + +NG+ D+A++L
Sbjct: 148 TAFDISIDNGNEDLAEIL 165

>pdb|2Y1L|E Chain E, Caspase-8 In Complex With Darpin-8.4 Length = 169

Iteration: 1
 Score = 46.6 bits (109), Expect = 5e-05,   Method: Compositional matrix adjust.
 Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 34/149 (22%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 650
           L+EAA+ G  + V++L+     V+A+  +G T L  A  NGH ++ ++LL  GA+++   
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVD 77
Query: 651 --NSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSG--VHAKT 706
               T L  AA  GH  +V++LL                           K+G  V+A  
Sbjct: 78  HAGMTPLRLAALFGHLEIVEVLL---------------------------KNGADVNAND 110
Query: 707 QTGDTALTYACENGHTDVADLLLSYGANL 735
             G T L  A   GH ++ ++LL  GA++
Sbjct: 111 MEGHTPLHLAAMFGHLEIVEVLLKNGADV 139

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 93.2 bits (230), Expect = 5e-19,   Method: Compositional matrix adjust.
 Identities = 60/155 (38%), Positives = 90/155 (58%), Gaps = 3/155 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V      G  TPL  AA SG +EIV +L+ H
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILIANGADVNAVDNTG-LTPLHLAAVSGHLEIVEVLLKH 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADV+     G TPL  A   GH  +V VLL+ GA+V   +  G TPL  AA  GH+ + 
Sbjct: 70  GADVDAADVYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVR 307
           ++LL+YGA +N   ++F ++A  ++   G+ D+ +
Sbjct: 130 EVLLKYGADVNAQ-DKFGKTAFDISIDNGNEDLAK 163

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/123 (38%), Positives = 75/123 (60%), Gaps = 5/123 (4%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 591
           L+EAA+ G  + VR L+ +GA V+A   TG T L  A  +GH ++ ++LL +GA++D + 
Sbjct: 18  LLEAARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAAD 77
Query: 592 ----TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA 647
               T L  AA  GH  +V++LL +   V+A   TG T L  A + GH ++ ++LL YGA
Sbjct: 78  VYGFTPLHLAAMTGHLEIVEVLLKYGADVNAFDMTGSTPLHLAADEGHLEIVEVLLKYGA 137
Query: 648 NLD 650
           +++
Sbjct: 138 DVN 140

>pdb|2V5Q|C Chain C, Crystal Structure Of Wild-type Plk-1 Kinase Domain In Complex With A Selective Darpin Length = 167

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/147 (29%), Positives = 73/147 (49%), Gaps = 30/147 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 652
           L+EAA+ G  + V++L+     V+A   TG T L  A  +GH ++ ++LL +GA++D + 
Sbjct: 18  LLEAARAGQDDEVRILIANGADVNAVDNTGLTPLHLAAVSGHLEIVEVLLKHGADVDAAD 77
Query: 653 ----TMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
               T L  AA  GH  +V++LL +                          + V+A   T
Sbjct: 78  VYGFTPLHLAAMTGHLEIVEVLLKY-------------------------GADVNAFDMT 112
Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
           G T L  A + GH ++ ++LL YGA++
Sbjct: 113 GSTPLHLAADEGHLEIVEVLLKYGADV 139

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 92.8 bits (229), Expect = 6e-19,   Method: Compositional matrix adjust.
 Identities = 57/157 (36%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V      G  TPL    ++G +EI+ +L+ +
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNANDWFG-ITPLHLVVNNGHLEIIEVLLKY 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
            ADVN    SG TPL  A   GH  +V VLL+ GA+V   +  G+TPL  AA  GH+ + 
Sbjct: 70  AADVNASDKSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL+YGA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKYGADVNAQ-DKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 87.4 bits (215), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 88/150 (58%), Gaps = 3/150 (2%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADVN     G TPL      GH  ++ VLL+  A+V   +
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASD 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
           ++G TPL  AA  GH+ + ++LL+YGA +N    +   + L LA   GHL++V  LL  G
Sbjct: 78  KSGWTPLHLAAYRGHLEIVEVLLKYGADVNAMDYQ-GYTPLHLAAEDGHLEIVEVLLKYG 136
Query: 314 ADQEHKTDEMHTALMEASMD-GHVEVAKLL 342
           AD  +  D+      + S+D G+ ++A++L
Sbjct: 137 ADV-NAQDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 47/138 (34%), Positives = 77/138 (55%), Gaps = 8/138 (5%)
Query: 513 DVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYA 569
           D    L+ NGA++   +    TPL      GHLE++  LL   A V+A  ++G T L  A
Sbjct: 28  DEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASDKSGWTPLHLA 87
Query: 570 CENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGD 624
              GH ++ ++LL YGA+++       T L  AA+ GH  +V++LL +   V+A+ + G 
Sbjct: 88  AYRGHLEIVEVLLKYGADVNAMDYQGYTPLHLAAEDGHLEIVEVLLKYGADVNAQDKFGK 147
Query: 625 TALTYACENGHTDVADLL 642
           TA   + +NG+ D+A++L
Sbjct: 148 TAFDISIDNGNEDLAEIL 165

>pdb|2BKK|B Chain B, Crystal Structure Of Aminoglycoside Phosphotransferase Aph (3')-Iiia In Complex With The Inhibitor Ar_3a Length = 169

Iteration: 1
 Score = 55.8 bits (133), Expect = 8e-08,   Method: Compositional matrix adjust.
 Identities = 43/147 (29%), Positives = 70/147 (47%), Gaps = 30/147 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 652
           L+EAA+ G  + V++L+     V+A    G T L     NGH ++ ++LL Y A+++ S 
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNANDWFGITPLHLVVNNGHLEIIEVLLKYAADVNASD 77
Query: 653 ----TMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
               T L  AA  GH  +V++LL +                          + V+A    
Sbjct: 78  KSGWTPLHLAAYRGHLEIVEVLLKY-------------------------GADVNAMDYQ 112
Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
           G T L  A E+GH ++ ++LL YGA++
Sbjct: 113 GYTPLHLAAEDGHLEIVEVLLKYGADV 139

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 91.7 bits (226), Expect = 1e-18,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V      G  TPL  AA+ G +EIV +L+ H
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNATDASG-LTPLHLAATYGHLEIVEVLLKH 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN     G+TPL  A   GH  +V VLL+ GA+V   +  G TPL  AA  GH+ + 
Sbjct: 70  GADVNAIDIXGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL++GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKHGADVNA-QDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +    TPL  AA  GHLE+V  LL  GA V+A    G T L  A   G
Sbjct: 32  ILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIXGSTPLHLAALIG 91
Query: 574 HTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL +GA+++       T L  AA  GH  +V++LL     V+A+ + G TA  
Sbjct: 92  HLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFD 151
Query: 629 YACENGHTDVADLL 642
            + +NG+ D+A++L
Sbjct: 152 ISIDNGNEDLAEIL 165

>pdb|4DUI|A Chain A, Darpin D1 Binding To Tubulin Beta Chain (not In Complex) Length = 169

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 30/148 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 650
           L+EAA+ G  + V++L+     V+A   +G T L  A   GH ++ ++LL +GA+++   
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID 77
Query: 651 --NSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
              ST L  AA  GH  +V++LL                            + V+A    
Sbjct: 78  IXGSTPLHLAALIGHLEIVEVLLK-------------------------HGADVNAVDTW 112
Query: 709 GDTALTYACENGHTDVADLLLSYGANLR 736
           GDT L  A   GH ++ ++LL +GA++ 
Sbjct: 113 GDTPLHLAAIMGHLEIVEVLLKHGADVN 140

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 60/157 (38%), Positives = 91/157 (57%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G+ LL  A  AG  +  ++L+A  A+V      G  TPL  AA+ G +EIV +L+ H
Sbjct: 12  SDLGKKLLE-AARAGQDDEVRILMANGADVNATDASG-LTPLHLAATYGHLEIVEVLLKH 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADVN     G+TPL  A   GH  +V VLL+ GA+V   +  G TPL  AA  GH+ + 
Sbjct: 70  GADVNAIDIMGSTPLHLAALIGHLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL++GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKHGADVNA-QDKFGKTAFDISIDNGNEDLAEIL 165

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 49/134 (36%), Positives = 75/134 (55%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +    TPL  AA  GHLE+V  LL  GA V+A    G T L  A   G
Sbjct: 32  ILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAIDIMGSTPLHLAALIG 91
Query: 574 HTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL +GA+++       T L  AA  GH  +V++LL     V+A+ + G TA  
Sbjct: 92  HLEIVEVLLKHGADVNAVDTWGDTPLHLAAIMGHLEIVEVLLKHGADVNAQDKFGKTAFD 151
Query: 629 YACENGHTDVADLL 642
            + +NG+ D+A++L
Sbjct: 152 ISIDNGNEDLAEIL 165

>pdb|4DRX|E Chain E, Gtp-Tubulin In Complex With A Darpin Length = 169

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 42/148 (28%), Positives = 70/148 (47%), Gaps = 30/148 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 650
           L+EAA+ G  + V++L+     V+A   +G T L  A   GH ++ ++LL +GA+++   
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNATDASGLTPLHLAATYGHLEIVEVLLKHGADVNAID 77
Query: 651 --NSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
              ST L  AA  GH  +V++LL                            + V+A    
Sbjct: 78  IMGSTPLHLAALIGHLEIVEVLLK-------------------------HGADVNAVDTW 112
Query: 709 GDTALTYACENGHTDVADLLLSYGANLR 736
           GDT L  A   GH ++ ++LL +GA++ 
Sbjct: 113 GDTPLHLAAIMGHLEIVEVLLKHGADVN 140

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 91.3 bits (225), Expect = 2e-18,   Method: Compositional matrix adjust.
 Identities = 59/157 (37%), Positives = 90/157 (57%), Gaps = 3/157 (1%)
Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           +D G  LL  A  AG  +  ++L+A  A+V      G  TPL  AA SG +EIV +L+ H
Sbjct: 12  SDLGRKLLE-AARAGQDDEVRILMANGADVNAADNTG-TTPLHLAAYSGHLEIVEVLLKH 69
Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADV+     G TPL  A   GH  +V VLL+ GA+V   + +G TPL  AA  G++ + 
Sbjct: 70  GADVDASDVFGYTPLHLAAYWGHLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIV 129
Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           ++LL++GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 130 EVLLKHGADVNAQ-DKFGKTAFDISIDNGNEDLAEIL 165

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 50/134 (37%), Positives = 74/134 (55%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANIELG---ASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++       +TPL  AA  GHLE+V  LL  GA V A    G T L  A   G
Sbjct: 32  ILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASDVFGYTPLHLAAYWG 91
Query: 574 HTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL  GA++     D  T L  AAK G+  +V++LL     V+A+ + G TA  
Sbjct: 92  HLEIVEVLLKNGADVNAMDSDGMTPLHLAAKWGYLEIVEVLLKHGADVNAQDKFGKTAFD 151
Query: 629 YACENGHTDVADLL 642
            + +NG+ D+A++L
Sbjct: 152 ISIDNGNEDLAEIL 165

>pdb|1SVX|A Chain A, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Maltose Binding Protein Length = 169

Iteration: 1
 Score = 50.8 bits (120), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 44/149 (29%), Positives = 73/149 (48%), Gaps = 34/149 (22%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 652
           L+EAA+ G  + V++L+     V+A   TG T L  A  +GH ++ ++LL +GA++D S 
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAADNTGTTPLHLAAYSGHLEIVEVLLKHGADVDASD 77
Query: 653 ----TMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSG--VHAKT 706
               T L  AA  GH  +V++LL                           K+G  V+A  
Sbjct: 78  VFGYTPLHLAAYWGHLEIVEVLL---------------------------KNGADVNAMD 110
Query: 707 QTGDTALTYACENGHTDVADLLLSYGANL 735
             G T L  A + G+ ++ ++LL +GA++
Sbjct: 111 SDGMTPLHLAAKWGYLEIVEVLLKHGADV 139

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 88.6 bits (218), Expect = 1e-17,   Method: Compositional matrix adjust.
 Identities = 59/159 (37%), Positives = 94/159 (59%), Gaps = 9/159 (5%)
Query: 154 DEGESLLSLACSAGYYELAQVLLAMHANV---EDRGIKGECTPLMEAASSGFIEIVRLLI 210
           D G+ LL  A +AG  +  ++L+A  A+V   +D G+    TPL  AA++G +EIV +L+
Sbjct: 5   DLGKKLLE-AAAAGQDDEVRILMANGADVNATDDNGL----TPLHLAAANGQLEIVEVLL 59
Query: 211 NHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVG 270
            +GADVN   S+G TPL  A   GH  +V VLL+ GA+V  ++  G TPL  AA +G + 
Sbjct: 60  KNGADVNASDSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLE 119
Query: 271 VAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           + ++LL++GA +N   +    +A  ++  +G  D+   L
Sbjct: 120 IVEVLLKHGADVNAQ-DALGLTAFDISINQGQEDLAEIL 157

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 72.4 bits (176), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 46/121 (38%), Positives = 70/121 (57%), Gaps = 1/121 (0%)
Query: 227 LMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHS 286
           L+ A A G +  VR+L+  GA+V   ++NG TPL  AA+ G + + ++LL+ GA +N  S
Sbjct: 10  LLEAAAAGQDDEVRILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNA-S 68
Query: 287 NEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSG 346
           +    + L LA Y GHL++V  LL  GAD         T L  A++ G +E+ ++LL  G
Sbjct: 69  DSAGITPLHLAAYDGHLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHG 128
Query: 347 A 347
           A
Sbjct: 129 A 129

>pdb|3Q9U|C Chain C, In Silico And In Vitro Co-Evolution Of A High Affinity Complementary Protein-Protein Interface Length = 158

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 46/134 (34%), Positives = 71/134 (52%), Gaps = 8/134 (5%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +    TPL  AA  G LE+V  LL +GA V+A    G T L  A  +G
Sbjct: 24  ILMANGADVNATDDNGLTPLHLAAANGQLEIVEVLLKNGADVNASDSAGITPLHLAAYDG 83
Query: 574 HTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT 628
           H ++ ++LL +GA+++       T L  AA  G   +V++LL     V+A+   G TA  
Sbjct: 84  HLEIVEVLLKHGADVNAYDRAGWTPLHLAALSGQLEIVEVLLKHGADVNAQDALGLTAFD 143
Query: 629 YACENGHTDVADLL 642
            +   G  D+A++L
Sbjct: 144 ISINQGQEDLAEIL 157

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 87.8 bits (216), Expect = 2e-17,   Method: Compositional matrix adjust.
 Identities = 46/89 (51%), Positives = 60/89 (67%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           TPL  AA +G +E+V+LL+  GADVN +  +G TPL  A   GH  VV++LLE GA+V  
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGA 280
            ++NG TPL  AA  GH+ V K+LLE GA
Sbjct: 64  KDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 78.2 bits (191), Expect = 1e-14,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 59/93 (63%), Gaps = 1/93 (1%)
Query: 222 SGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
           +G TPL  A   GH  VV++LLE GA+V   ++NG TPL  AA  GH+ V K+LLE GA 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
           +N   ++   + L LA   GHL++V+ LL AGA
Sbjct: 61  VNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 75.1 bits (183), Expect = 1e-13,   Method: Compositional matrix adjust.
 Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 1/93 (1%)
Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
           NG TPL  AA  GH+ V K+LLE GA +N   ++   + L LA   GHL++V+ LL AGA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGA 59
Query: 315 DQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           D   K     T L  A+ +GH+EV KLLL++GA
Sbjct: 60  DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 70.1 bits (170), Expect = 5e-12,   Method: Compositional matrix adjust.
 Identities = 41/86 (47%), Positives = 55/86 (63%), Gaps = 5/86 (5%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-- 588
           TPL  AA+ GHLE+V+ LL++GA V+AK + G T L  A  NGH +V  LLL  GA++  
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63
Query: 589 ---DNSTMLIEAAKGGHANVVQLLLD 611
              +  T L  AA+ GH  VV+LLL+
Sbjct: 64  KDKNGRTPLHLAARNGHLEVVKLLLE 89

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 62.8 bits (151), Expect = 8e-10,   Method: Compositional matrix adjust.
 Identities = 40/92 (43%), Positives = 50/92 (54%), Gaps = 5/92 (5%)
Query: 561 TGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRS 615
            G T L  A  NGH +V  LLL  GA+++       T L  AA+ GH  VV+LLL+    
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60
Query: 616 VHAKTQTGDTALTYACENGHTDVADLLLSYGA 647
           V+AK + G T L  A  NGH +V  LLL  GA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|1N0Q|A Chain A, 3ank: A Designed Ankyrin Repeat Protein With Three Identical Consensus Repeats Length = 93

Iteration: 1
 Score = 49.7 bits (117), Expect = 6e-06,   Method: Compositional matrix adjust.
 Identities = 40/117 (34%), Positives = 51/117 (43%), Gaps = 30/117 (25%)
Query: 622 TGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRS 676
            G T L  A  NGH +V  LLL  GA++     +  T L  AA+ GH  VV+LLL+    
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE---- 56
Query: 677 VIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGA 733
                                  + V+AK + G T L  A  NGH +V  LLL  GA
Sbjct: 57  ---------------------AGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 79.3 bits (194), Expect = 6e-15,   Method: Compositional matrix adjust.
 Identities = 66/218 (30%), Positives = 105/218 (48%), Gaps = 25/218 (11%)
Query: 126 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLA-------------CSAGYYELA 172
            L++A +DGD++ V+ LL       E  ++ E  +S A             C+     LA
Sbjct: 14  KLLRAVADGDLEMVRYLL---EWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLA 70
Query: 173 QVL---LAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMY 229
           +V    L ++   +D       +PL  AA  G  +++ LL+ HGA+   +++    PL  
Sbjct: 71  KVPASGLGVNVTSQDGS-----SPLHVAALHGRADLIPLLLKHGANAGARNADQAVPLHL 125
Query: 230 ACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEF 289
           AC  GH  VV+ LL+  A     + +G+TPL+ A S GH  +  +LL++GA IN  SN  
Sbjct: 126 ACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINA-SNNK 184
Query: 290 KESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTAL 327
             +AL  A  + H+ +V  LL  GA  +       TA+
Sbjct: 185 GNTALHEAVIEKHVFVVELLLLHGASVQVLNKRQRTAV 222

>pdb|4B93|B Chain B, Complex Of Vamp7 Cytoplasmic Domain With 2nd Ankyrin Repeat Domain Of Varp Length = 269

Iteration: 1
 Score = 74.3 bits (181), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 55/151 (36%), Positives = 82/151 (54%), Gaps = 9/151 (5%)
Query: 510 GFLDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTAL 566
           G  D+   LLK+GAN        + PL  A Q+GH ++V+ LLDS A+ + K  +G+T L
Sbjct: 97  GRADLIPLLLKHGANAGARNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPL 156
Query: 567 TYACENGHTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPRSVHAKTQ 621
            YAC  GH ++  LLL +GA+++ S     T L EA    H  VV+LLL    SV    +
Sbjct: 157 IYACSGGHHELVALLLQHGASINASNNKGNTALHEAVIEKHVFVVELLLLHGASVQVLNK 216
Query: 622 TGDTALTYACENGHT-DVADLLLSYGANLDN 651
              TA+  A +N    ++  ++ S  A+LD+
Sbjct: 217 RQRTAVDCAEQNSKIMELLQVVPSCVASLDD 247

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 87.0 bits (214), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 88/294 (29%), Positives = 121/294 (41%), Gaps = 40/294 (13%)
Query: 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGA 214
           E   LL  A      +L Q LL   ANV  +  +G  TPL  A      +IV LL+ HGA
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63
Query: 215 DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKI 274
           D   +  +G TP + A   G   ++++ L  GA+V + +  G T  MEAA  G V   K 
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123
Query: 275 LLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDG 334
           L + GA +N                               DQE       TALM+A+  G
Sbjct: 124 LYKRGANVNLRR------------------------KTKEDQERLRKGGATALMDAAEKG 159
Query: 335 HVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLL 394
           HVEV K+LLD     V+A         D   R + I    S        D DV+ +  LL
Sbjct: 160 HVEVLKILLDEMGADVNAC--------DNMGRNALIHALLS------SDDSDVEAITHLL 205
Query: 395 TE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLM 446
            + G  V+   + G++ L LA    +  L Q LL   H  + D    G+   L+
Sbjct: 206 LDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLL 259

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 63.9 bits (154), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 85/282 (30%), Positives = 120/282 (42%), Gaps = 42/282 (14%)
Query: 406 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYA 465
           E   LL  A      +L Q LL   ANV  +  +G  TPL  A    R+    + V    
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSRE----DIVELLL 59
Query: 466 RHDFFPNDKSVNG--------LQASVILIP-----GAKINAHXXXXXXXXXXXXCCGGFL 512
           RH   P  +  NG        +  SV L+      GA +N                 G +
Sbjct: 60  RHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKV 118
Query: 513 DVADFLLKNGANIEL-------------GASTPLMEAAQEGHLELVRYLLDS-GAQVHAK 558
               FL K GAN+ L             G +T LM+AA++GH+E+++ LLD  GA V+A 
Sbjct: 119 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC 178
Query: 559 TQTGDTALTYA-CENGHTDV---ADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLL 609
              G  AL +A   +  +DV     LLL +GA+++       T LI A +  H  +VQ L
Sbjct: 179 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238
Query: 610 LDFPR-SVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
           L+     ++     G TAL  A E     +A+LL   GA+ D
Sbjct: 239 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280

>pdb|1WDY|A Chain A, Crystal Structure Of Ribonuclease Length = 285

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/161 (28%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENGHTDVADLLLSYGAN---- 587
           L++A Q   ++LV+ LL+ GA V+ + + G  T L  A +    D+ +LLL +GA+    
Sbjct: 9   LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 68
Query: 588 -LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
             + +T  + AA  G   +++L L     V+     G TA   A   G       L   G
Sbjct: 69  KKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG 128
Query: 647 ANLD---------------NSTMLIEAAKGGHANVVQLLLD 672
           AN++                +T L++AA+ GH  V+++LLD
Sbjct: 129 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 169

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 86.7 bits (213), Expect = 4e-17,   Method: Compositional matrix adjust.
 Identities = 85/294 (28%), Positives = 123/294 (41%), Gaps = 40/294 (13%)
Query: 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGA 214
           E   LL  A      +L Q LL   ANV  +  +G  TPL  A      +IV LL+ HGA
Sbjct: 24  EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 83
Query: 215 DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKI 274
           D   +  +G TP + A   G   ++++ L  GA+V + +  G T  MEAA  G V   K 
Sbjct: 84  DPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 143
Query: 275 LLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDG 334
           L + GA +N                               DQE       TALM+A+  G
Sbjct: 144 LYKRGANVNLRR------------------------KTKEDQERLRKGGATALMDAAEKG 179
Query: 335 HVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLL 394
           HVEV K+LLD     V+A           C+     +  ++   + +  D DV+ +  LL
Sbjct: 180 HVEVLKILLDEMGADVNA-----------CDNMGRNALIHA---LLSSDDSDVEAITHLL 225
Query: 395 TE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLM 446
            + G  V+   + G++ L LA    +  L Q LL   H  + D    G+   L+
Sbjct: 226 LDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLL 279

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 89/303 (29%), Positives = 132/303 (43%), Gaps = 42/303 (13%)
Query: 406 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYA 465
           E   LL  A      +L Q LL   ANV  +  +G  TPL  A    R+    + V    
Sbjct: 24  EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSRE----DIVELLL 79
Query: 466 RHDFFPNDKSVNG--------LQASVILIP-----GAKINAHXXXXXXXXXXXXCCGGFL 512
           RH   P  +  NG        +  SV L+      GA +N                 G +
Sbjct: 80  RHGADPVLRKKNGATPFILAAIAGSVKLLKLFLSKGADVN-ECDFYGFTAFMEAAVYGKV 138
Query: 513 DVADFLLKNGANIEL-------------GASTPLMEAAQEGHLELVRYLLDS-GAQVHAK 558
               FL K GAN+ L             G +T LM+AA++GH+E+++ LLD  GA V+A 
Sbjct: 139 KALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNAC 198
Query: 559 TQTGDTALTYA-CENGHTDV---ADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLL 609
              G  AL +A   +  +DV     LLL +GA+++       T LI A +  H  +VQ L
Sbjct: 199 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 258
Query: 610 LDFPR-SVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQ 668
           L+     ++     G TAL  A E     +A+LL   GA+ D   +++ A +    ++V+
Sbjct: 259 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLVK 318
Query: 669 LLL 671
           +LL
Sbjct: 319 VLL 321

>pdb|4G8K|A Chain A, Intact Sensor Domain Of Human Rnase L In The Inactive Signaling State Length = 337

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 47/161 (29%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGD-TALTYACENGHTDVADLLLSYGAN---- 587
           L++A Q   ++LV+ LL+ GA V+ + + G  T L  A +    D+ +LLL +GA+    
Sbjct: 29  LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 88
Query: 588 -LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
             + +T  I AA  G   +++L L     V+     G TA   A   G       L   G
Sbjct: 89  KKNGATPFILAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKRG 148
Query: 647 ANLD---------------NSTMLIEAAKGGHANVVQLLLD 672
           AN++                +T L++AA+ GH  V+++LLD
Sbjct: 149 ANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLD 189

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 51/171 (29%), Positives = 89/171 (52%), Gaps = 10/171 (5%)
Query: 190 ECTPLMEAASSGFIEIVR-LLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN 248
           E   L+EAA+    + V+ +L +    V+   + GNTPL  A       + + L++ GA+
Sbjct: 5   EVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD 64
Query: 249 VEDHNENGHTPLMEAASAGHVGVAKILLEYGA-GINTHSNEFKESALTLACYKGHLDMVR 307
           +   N    +P + A + G   +   +L++    +N H N +  +AL  A  KGH+D V+
Sbjct: 65  INLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKH-NRYGGNALIPAAEKGHIDNVK 123
Query: 308 FLLSAG-ADQEHKTDEMHTALMEAS--MDG---HVEVAKLLLDSGA-QSVS 351
            LL  G  D + + D  +TAL+EA    +G   + ++ KLL+++GA QS+ 
Sbjct: 124 LLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIK 174

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 45/149 (30%), Positives = 76/149 (51%), Gaps = 15/149 (10%)
Query: 512 LDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLD-SGAQVHAKTQTGDTALT 567
           +++A  L+  GA+I L  S   +P + A  +G  E++ Y+L  +   ++   + G  AL 
Sbjct: 52  IEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALI 111
Query: 568 YACENGHTDVADLLLSYG---ANLDNS---TMLIEAA---KGG--HANVVQLLLDFPRSV 616
            A E GH D   LLL  G    +  N    T LIEA    +G   + ++V+LL++     
Sbjct: 112 PAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQ 171
Query: 617 HAKTQTGDTALTYACENGHTDVADLLLSY 645
             K  +G TA+ YA + G+T+++ +L  Y
Sbjct: 172 SIKDNSGRTAMDYANQKGYTEISKILAQY 200

>pdb|3HRA|A Chain A, Crystal Structure Of Ef0377 An Ankyrin Repeat Protein Length = 201

Iteration: 1
 Score = 47.0 bits (110), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 59/219 (26%), Positives = 93/219 (42%), Gaps = 36/219 (16%)
Query: 526 ELGASTPLMEAAQEGHLELVRYLL-DSGAQVHAKTQTGDTALTYACENGHTDVADLLLSY 584
           E+GA   L+EAA +   + V+ +L D+  QV      G+T L  A  N   ++A  L+  
Sbjct: 5   EVGA---LLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR 61
Query: 585 GANLD------NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDV 638
           GA+++      +S  L   A+G    +  +L      ++   + G  AL  A E GH D 
Sbjct: 62  GADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDN 121
Query: 639 ADLLLSYG---ANLDNS---TMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXX 692
             LLL  G    +  N    T LIEA      N  QL  D  + ++              
Sbjct: 122 VKLLLEDGREDIDFQNDFGYTALIEAVGLREGN--QLYQDIVKLLM-------------- 165
Query: 693 XXXQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSY 731
               G    +  K  +G TA+ YA + G+T+++ +L  Y
Sbjct: 166 --ENGADQSI--KDNSGRTAMDYANQKGYTEISKILAQY 200

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 84.7 bits (208), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EA  +G  + VR+L+ +GADVN    +G TPL  A   GH  +V VLL+ GA+V   +
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASD 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
             G TPL  AA+ GH+ + ++LLEYGA +N   ++F ++A  ++   G+ D+   L
Sbjct: 78  SWGRTPLHLAATVGHLEIVEVLLEYGADVNAQ-DKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 591
           L+EA + G  + VR L+ +GA V+A    G T L  A + GH ++ ++LL +GA+++ S 
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASD 77
Query: 592 ----TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
               T L  AA  GH  +V++LL++   V+A+ + G TA   + +NG+ D+A++L
Sbjct: 78  SWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2XZT|G Chain G, Caspase-3 In Complex With Darpin-3.4_i78s Length = 136

Iteration: 1
 Score = 49.3 bits (116), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 30/140 (21%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 652
           L+EA + G  + V++L+     V+A    G T L  A + GH ++ ++LL +GA+++ S 
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASD 77
Query: 653 ----TMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
               T L  AA  GH  +V++LL++                          + V+A+ + 
Sbjct: 78  SWGRTPLHLAATVGHLEIVEVLLEYG-------------------------ADVNAQDKF 112
Query: 709 GDTALTYACENGHTDVADLL 728
           G TA   + +NG+ D+A++L
Sbjct: 113 GKTAFDISIDNGNEDLAEIL 132

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 84.3 bits (207), Expect = 2e-16,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 72/116 (62%), Gaps = 1/116 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADVN     GNTPL  A    H  +V VLL+ GA+V  H+
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
            +G TPL  AA  GH+ + ++LL++GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 78  NDGSTPLHLAALFGHLEIVEVLLKHGADVNA-QDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 42/115 (36%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---- 588
           L+EAA+ G  + VR L+ +GA V+A  + G+T L  A +  H ++ ++LL +GA++    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD 77
Query: 589 -DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
            D ST L  AA  GH  +V++LL     V+A+ + G TA   + +NG+ D+A++L
Sbjct: 78  NDGSTPLHLAALFGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2V4H|C Chain C, Nemo Cc2-Lz Domain - 1d5 Darpin Complex Length = 136

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 41/142 (28%), Positives = 70/142 (49%), Gaps = 34/142 (23%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---- 649
           L+EAA+ G  + V++L+     V+A  + G+T L  A +  H ++ ++LL +GA++    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNANDRKGNTPLHLAADYDHLEIVEVLLKHGADVNAHD 77
Query: 650 -DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSG--VHAKT 706
            D ST L  AA  GH  +V++LL                           K G  V+A+ 
Sbjct: 78  NDGSTPLHLAALFGHLEIVEVLL---------------------------KHGADVNAQD 110
Query: 707 QTGDTALTYACENGHTDVADLL 728
           + G TA   + +NG+ D+A++L
Sbjct: 111 KFGKTAFDISIDNGNEDLAEIL 132

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EA  +G  + VR+L+ +GADVN    +G TPL  A   GH  +V VLL+ GA+V   +
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARD 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
             G TPL  AA+ GH+ + ++LLEYGA +N   ++F ++A  ++   G+ D+   L
Sbjct: 78  IWGRTPLHLAATVGHLEIVEVLLEYGADVNAQ-DKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 67.0 bits (162), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 69/115 (60%), Gaps = 5/115 (4%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 589
           L+EA + G  + VR L+ +GA V+A    G T L  A + GH ++ ++LL +GA+++   
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARD 77
Query: 590 --NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
               T L  AA  GH  +V++LL++   V+A+ + G TA   + +NG+ D+A++L
Sbjct: 78  IWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2Y0B|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4_s76r Length = 136

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 68/140 (48%), Gaps = 30/140 (21%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 650
           L+EA + G  + V++L+     V+A    G T L  A + GH ++ ++LL +GA+++   
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNARD 77
Query: 651 --NSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
               T L  AA  GH  +V++LL++                          + V+A+ + 
Sbjct: 78  IWGRTPLHLAATVGHLEIVEVLLEYG-------------------------ADVNAQDKF 112
Query: 709 GDTALTYACENGHTDVADLL 728
           G TA   + +NG+ D+A++L
Sbjct: 113 GKTAFDISIDNGNEDLAEIL 132

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 97/187 (51%), Gaps = 2/187 (1%)
Query: 161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS 220
           +LA S    EL + +LA   ++  R  +   T L  A S+G  EIV  L+  G  VN + 
Sbjct: 13  NLAYSGKLEELKESILA-DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD 71
Query: 221 SSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280
            +G +PL  A + G + +V+ LL  GA V   N+NG TPL  AAS     +A +LLE GA
Sbjct: 72  DAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA 131
Query: 281 GINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAK 340
             +   + ++ +A+  A  KG+L M+  LL   A    +  E +T L  A  +  VE AK
Sbjct: 132 NPDA-KDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK 190
Query: 341 LLLDSGA 347
           LL+  GA
Sbjct: 191 LLVSQGA 197

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 507 CCGGFLDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD 563
           C  G  ++ +FLL+ G  +   +    +PL  AA  G  E+V+ LL  GAQV+A  Q G 
Sbjct: 49  CSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGC 108
Query: 564 TALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHA 618
           T L YA      ++A +LL  GAN D      +T +  AA  G+  ++ +LL +  S + 
Sbjct: 109 TPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNI 168
Query: 619 KTQTGDTALTYACENGHTDVADLLLSYGANL----DNSTMLIEAAKGGHANVVQLLLD 672
           +   G+T L  AC+    + A LL+S GA++          ++ AKGG   +++ +++
Sbjct: 169 QDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRMVE 226

>pdb|1QYM|A Chain A, X-Ray Structure Of Human Gankyrin Length = 227

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 560 QTGDTALTYACENGHTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPR 614
           Q   TAL +AC  GHT++ + LL  G  +++      + L  AA  G   +V+ LL    
Sbjct: 39  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 98
Query: 615 SVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQL 669
            V+A  Q G T L YA      ++A +LL  GAN D      +T +  AA  G+  ++ +
Sbjct: 99  QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHI 158
Query: 670 LLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQTGDTALTYACENGHTDVADLLL 729
           LL +                         K+  + +   G+T L  AC+    + A LL+
Sbjct: 159 LLYY-------------------------KASTNIQDTEGNTPLHLACDEERVEEAKLLV 193
Query: 730 SYGANL 735
           S GA++
Sbjct: 194 SQGASI 199

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 84.0 bits (206), Expect = 3e-16,   Method: Compositional matrix adjust.
 Identities = 67/187 (35%), Positives = 97/187 (51%), Gaps = 2/187 (1%)
Query: 161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS 220
           +LA S    EL + +LA   ++  R  +   T L  A S+G  EIV  L+  G  VN + 
Sbjct: 12  NLAYSGKLEELKESILA-DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKD 70
Query: 221 SSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280
            +G +PL  A + G + +V+ LL  GA V   N+NG TPL  AAS     +A +LLE GA
Sbjct: 71  DAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGA 130
Query: 281 GINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAK 340
             +   + ++ +A+  A  KG+L M+  LL   A    +  E +T L  A  +  VE AK
Sbjct: 131 NPDA-KDHYEATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK 189
Query: 341 LLLDSGA 347
           LL+  GA
Sbjct: 190 LLVSQGA 196

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 77.0 bits (188), Expect = 4e-14,   Method: Compositional matrix adjust.
 Identities = 55/178 (30%), Positives = 91/178 (51%), Gaps = 12/178 (6%)
Query: 507 CCGGFLDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD 563
           C  G  ++ +FLL+ G  +   +    +PL  AA  G  E+V+ LL  GAQV+A  Q G 
Sbjct: 48  CSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGC 107
Query: 564 TALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHA 618
           T L YA      ++A +LL  GAN D      +T +  AA  G+  ++ +LL +  S + 
Sbjct: 108 TPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTNI 167
Query: 619 KTQTGDTALTYACENGHTDVADLLLSYGANL----DNSTMLIEAAKGGHANVVQLLLD 672
           +   G+T L  AC+    + A LL+S GA++          ++ AKGG   +++ +++
Sbjct: 168 QDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVAKGGLGLILKRMVE 225

>pdb|1UOH|A Chain A, Human Gankyrin Length = 226

Iteration: 1
 Score = 61.2 bits (147), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 52/186 (27%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 560 QTGDTALTYACENGHTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPR 614
           Q   TAL +AC  GHT++ + LL  G  +++      + L  AA  G   +V+ LL    
Sbjct: 38  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGA 97
Query: 615 SVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQL 669
            V+A  Q G T L YA      ++A +LL  GAN D      +T +  AA  G+  ++ +
Sbjct: 98  QVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHI 157
Query: 670 LLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQTGDTALTYACENGHTDVADLLL 729
           LL +                         K+  + +   G+T L  AC+    + A LL+
Sbjct: 158 LLYY-------------------------KASTNIQDTEGNTPLHLACDEERVEEAKLLV 192
Query: 730 SYGANL 735
           S GA++
Sbjct: 193 SQGASI 198

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 83.6 bits (205), Expect = 4e-16,   Method: Compositional matrix adjust.
 Identities = 46/116 (39%), Positives = 71/116 (61%), Gaps = 1/116 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EA  +G  + VR+L+ +GADVN    +G TPL  A   GH  +V VLL+ GA+V   +
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASD 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
             G TPL  AA+ GH+ + ++LLEYGA +N   ++F ++A  ++   G+ D+   L
Sbjct: 78  IWGRTPLHLAATVGHLEIVEVLLEYGADVNAQ-DKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 68.6 bits (166), Expect = 1e-11,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 591
           L+EA + G  + VR L+ +GA V+A    G T L  A + GH ++ ++LL +GA+++ S 
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASD 77
Query: 592 ----TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
               T L  AA  GH  +V++LL++   V+A+ + G TA   + +NG+ D+A++L
Sbjct: 78  IWGRTPLHLAATVGHLEIVEVLLEYGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|2XZD|G Chain G, Caspase-3 In Complex With An Inhibitory Darpin-3.4 Length = 136

Iteration: 1
 Score = 48.9 bits (115), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 38/140 (27%), Positives = 69/140 (49%), Gaps = 30/140 (21%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 652
           L+EA + G  + V++L+     V+A    G T L  A + GH ++ ++LL +GA+++ S 
Sbjct: 18  LLEATRAGQDDEVRILMANGADVNAMDDAGVTPLHLAAKRGHLEIVEVLLKHGADVNASD 77
Query: 653 ----TMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
               T L  AA  GH  +V++LL++                          + V+A+ + 
Sbjct: 78  IWGRTPLHLAATVGHLEIVEVLLEYG-------------------------ADVNAQDKF 112
Query: 709 GDTALTYACENGHTDVADLL 728
           G TA   + +NG+ D+A++L
Sbjct: 113 GKTAFDISIDNGNEDLAEIL 132

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 82.4 bits (202), Expect = 9e-16,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
Query: 159 LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNG 218
           + +LA S    EL + +LA   ++  R  +   T L  A S+G  EIV  L+  G  VN 
Sbjct: 10  ICNLAYSGKLDELKERILA-DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 68
Query: 219 QSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278
           +  +G +PL  A + G + +V+ LL  GA+V   N+NG TPL  AAS     +A +LLE 
Sbjct: 69  KDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 128
Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEV 338
           GA  +   + +  +A+  A  KG+L MV  LL   A    +  E +T L  A  +  VE 
Sbjct: 129 GANPDA-KDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEE 187
Query: 339 AKLLLDSGA 347
           AK L+  GA
Sbjct: 188 AKFLVTQGA 196

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 72.8 bits (177), Expect = 6e-13,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 507 CCGGFLDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD 563
           C  G  ++ +FLL+ G  +   +    +PL  AA  G  E+V+ LL  GA V+A  Q G 
Sbjct: 48  CSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGAHVNAVNQNGC 107
Query: 564 TALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHA 618
           T L YA      ++A +LL  GAN D     ++T +  AA  G+  +V +LL +  S + 
Sbjct: 108 TPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI 167
Query: 619 KTQTGDTALTYACENGHTDVADLLLSYGANL----DNSTMLIEAAKGGHANVVQLL 670
           +   G+T L  AC+    + A  L++ GA++          ++ AKGG   +++ L
Sbjct: 168 QDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRL 223

>pdb|2DVW|A Chain A, Structure Of The Oncoprotein Gankyrin In Complex With S6 Atpase Of The 26s Proteasome Length = 231

Iteration: 1
 Score = 59.3 bits (142), Expect = 8e-09,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 560 QTGDTALTYACENGHTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPR 614
           Q   TAL +AC  GHT++ + LL  G  +++      + L  AA  G   +V+ LL    
Sbjct: 38  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGRDEIVKALLVKGA 97
Query: 615 SVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQL 669
            V+A  Q G T L YA      ++A +LL  GAN D     ++T +  AA  G+  +V +
Sbjct: 98  HVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHI 157
Query: 670 LLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQTGDTALTYACENGHTDVADLLL 729
           LL +                         K+  + +   G+T L  AC+    + A  L+
Sbjct: 158 LLFY-------------------------KASTNIQDTEGNTPLHLACDEERVEEAKFLV 192
Query: 730 SYGANL 735
           + GA++
Sbjct: 193 TQGASI 198

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 81.3 bits (199), Expect = 2e-15,   Method: Compositional matrix adjust.
 Identities = 67/189 (35%), Positives = 97/189 (51%), Gaps = 2/189 (1%)
Query: 159 LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNG 218
           + +LA S    EL + +LA   ++  R  +   T L  A S+G  EIV  L+  G  VN 
Sbjct: 10  ICNLAYSGKLDELKERILA-DKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 68
Query: 219 QSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278
           +  +G +PL  A + G + +V+ LL  GA+V   N+NG TPL  AAS     +A +LLE 
Sbjct: 69  KDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 128
Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEV 338
           GA  +   + +  +A+  A  KG+L MV  LL   A    +  E +T L  A  +  VE 
Sbjct: 129 GANPDA-KDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEE 187
Query: 339 AKLLLDSGA 347
           AK L+  GA
Sbjct: 188 AKFLVTQGA 196

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 72.0 bits (175), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 54/176 (30%), Positives = 88/176 (50%), Gaps = 12/176 (6%)
Query: 507 CCGGFLDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD 563
           C  G  ++ +FLL+ G  +   +    +PL  AA  G  E+V+ LL  GA V+A  Q G 
Sbjct: 48  CSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGC 107
Query: 564 TALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVHA 618
           T L YA      ++A +LL  GAN D     ++T +  AA  G+  +V +LL +  S + 
Sbjct: 108 TPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNI 167
Query: 619 KTQTGDTALTYACENGHTDVADLLLSYGANL----DNSTMLIEAAKGGHANVVQLL 670
           +   G+T L  AC+    + A  L++ GA++          ++ AKGG   +++ L
Sbjct: 168 QDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRL 223

>pdb|3AJI|A Chain A, Structure Of Gankyrin-S6atpase Photo-Cross-Linked Site-Specifically, And Incoporated By Genetic Code Expansion Length = 231

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/186 (27%), Positives = 82/186 (44%), Gaps = 35/186 (18%)
Query: 560 QTGDTALTYACENGHTDVADLLLSYGANLDNS-----TMLIEAAKGGHANVVQLLLDFPR 614
           Q   TAL +AC  GHT++ + LL  G  +++      + L  AA  G   +V+ LL    
Sbjct: 38  QDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGA 97
Query: 615 SVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQL 669
            V+A  Q G T L YA      ++A +LL  GAN D     ++T +  AA  G+  +V +
Sbjct: 98  HVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHI 157
Query: 670 LLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQTGDTALTYACENGHTDVADLLL 729
           LL +                         K+  + +   G+T L  AC+    + A  L+
Sbjct: 158 LLFY-------------------------KASTNIQDTEGNTPLHLACDEERVEEAKFLV 192
Query: 730 SYGANL 735
           + GA++
Sbjct: 193 TQGASI 198

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 80.9 bits (198), Expect = 3e-15,   Method: Compositional matrix adjust.
 Identities = 47/116 (40%), Positives = 73/116 (62%), Gaps = 1/116 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADVN +   G TPL  A A GH  +V VLL+ GA+V   +
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
             G TPL  AA  GH+ +A++LL++GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 78  AIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQ-DKFGKTAFDISIGNGNEDLAEIL 132

>pdb|2JAB|A Chain A, A Designed Ankyrin Repeat Protein Evolved To Picomolar Affinity To Her2 Length = 136

Iteration: 1
 Score = 61.6 bits (148), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 41/115 (35%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 589
           L+EAA+ G  + VR L+ +GA V+AK + G T L  A  +GH ++ ++LL  GA+++   
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD 77
Query: 590 --NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
               T L  AA  GH  + ++LL     V+A+ + G TA   +  NG+ D+A++L
Sbjct: 78  AIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEIL 132

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 58/177 (32%), Positives = 90/177 (50%), Gaps = 14/177 (7%)
Query: 509 GGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTA 565
            G +D+   L++ GANI+  +    TPLMEAA+  HLE V+YL+ +GA V  K   G T 
Sbjct: 21  AGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGSTC 80
Query: 566 LTYACENGHTDVADLLLSYGANLDN------STMLIEAAKGGHANVVQLLLDFPRSVHAK 619
           L  A + GH +V   LLS G    N       T +I A +  H ++V+LLL     ++ +
Sbjct: 81  LHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIR 140
Query: 620 TQTGDTALTYACENGHTDVADLLLS-----YGANLDNSTMLIEAAKGGHANVVQLLL 671
               +  L +A  +G  D+A++LL+     +  N+   + L  AA+    + V L L
Sbjct: 141 DNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFL 197

>pdb|3B7B|A Chain A, Euhmt1 (Glp) Ankyrin Repeat Domain (Structure 1) Length = 237

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 65/221 (29%), Positives = 98/221 (44%), Gaps = 38/221 (17%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD- 589
           +PL  AA+ GH+++   L+ +GA +   ++   T L  A EN H +    L+  GA +D 
Sbjct: 13  SPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDP 72
Query: 590 ----NSTMLIEAAKGGHANVVQLLL-DFPRSVHAKTQTGDTALTYACENGHTDVADLLLS 644
                ST L  AAK GH  VVQ LL +    V+ +   G T + +A E  H D+  LLLS
Sbjct: 73  KDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLS 132
Query: 645 YGANL---DN--STMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKK 699
            G+++   DN  +  L  AA  G  ++ ++LL                           K
Sbjct: 133 KGSDINIRDNEENICLHWAAFSGCVDIAEILL-------------------------AAK 167
Query: 700 SGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN--LRNR 738
             +HA    GD+ L  A      D   L LS  ++  L+N+
Sbjct: 168 CDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNK 208

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 80.1 bits (196), Expect = 4e-15,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 2/158 (1%)
Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
           + +P+ EAA  G    +R LI+ G  VN  ++   +PL  AC GGH + V++LL+ GA V
Sbjct: 3   DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV 62
Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
                + HTPL  A  +G      +LL++GA +   S+    S +  A  +GH++ V  L
Sbjct: 63  NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD--LASPIHEAARRGHVECVNSL 120
Query: 310 LSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           ++ G + +HK   + T L  A  +      K LL+SGA
Sbjct: 121 IAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGA 158

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 68.9 bits (167), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 51/151 (33%), Positives = 74/151 (49%), Gaps = 8/151 (5%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-- 588
           +PL EA   GHL  V+ LL  GAQV+  T    T L  AC +G  D  +LLL +GA++  
Sbjct: 38  SPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP 97
Query: 589 --DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
             D ++ + EAA+ GH   V  L+ +  ++  K     T L  ACEN        LL  G
Sbjct: 98  ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG 157
Query: 647 ANLD----NSTMLIEAAKGGHANVVQLLLDF 673
           A+++      + L   A+     +  LL+DF
Sbjct: 158 ADVNQGKGQDSPLHAVARTASEELACLLMDF 188

>pdb|3ZKJ|A Chain A, Crystal Structure Of Ankyrin Repeat And Socs Box-containing Protein 9 (asb9) In Complex With Elonginb And Elonginc Length = 261

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 55/209 (26%), Positives = 80/209 (38%), Gaps = 57/209 (27%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
           +P+ EAA  GH   +R L+  G  V+  T                             D+
Sbjct: 5   SPMHEAAIHGHQLSLRNLISQGWAVNIITA----------------------------DH 36
Query: 591 STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL- 649
            + L EA  GGH + V++LL     V+  T    T L  AC +G  D  +LLL +GA++ 
Sbjct: 37  VSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQ 96
Query: 650 ---DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKT 706
              D ++ + EAA+ GH   V  L+ +     GG                     +  K 
Sbjct: 97  PESDLASPIHEAARRGHVECVNSLIAY-----GG--------------------NIDHKI 131
Query: 707 QTGDTALTYACENGHTDVADLLLSYGANL 735
               T L  ACEN        LL  GA++
Sbjct: 132 SHLGTPLYLACENQQRACVKKLLESGADV 160

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 79.0 bits (193), Expect = 8e-15,   Method: Compositional matrix adjust.
 Identities = 53/158 (33%), Positives = 83/158 (52%), Gaps = 2/158 (1%)
Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
           + +P+ EAA  G    +R LI+ G  VN  ++   +PL  AC GGH + V++LL+ GA V
Sbjct: 59  DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV 118
Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
                + HTPL  A  +G      +LL++GA +   S+    S +  A  +GH++ V  L
Sbjct: 119 NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD--LASPIHEAARRGHVECVNSL 176
Query: 310 LSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           ++ G + +HK   + T L  A  +      K LL+SGA
Sbjct: 177 IAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGA 214

>pdb|3D9H|A Chain A, Crystal Structure Of The Splice Variant Of Human Asb9 (Hasb9-2), An Ankyrin Repeat Protein Length = 285

Iteration: 1
 Score = 67.4 bits (163), Expect = 3e-11,   Method: Compositional matrix adjust.
 Identities = 50/151 (33%), Positives = 73/151 (48%), Gaps = 8/151 (5%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-- 588
           +PL EA   GHL  V+ LL  GAQV+  T    T L  AC +G  D  +LLL +GA++  
Sbjct: 94  SPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQP 153
Query: 589 --DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
             D ++ + EAA+ GH   V  L+ +  ++  K     T L  ACEN        LL  G
Sbjct: 154 ESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESG 213
Query: 647 ANLDNS----TMLIEAAKGGHANVVQLLLDF 673
           A+++      + L    +     +  LL+DF
Sbjct: 214 ADVNQGKGQDSPLHAVVRTASEELACLLMDF 244

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 77.8 bits (190), Expect = 2e-14,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L  +GADVN     G+TPL  A   GH  +V VLL+ GA+V    
Sbjct: 18  LLEAARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATG 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
             G TPL  AA A H+ + ++LL++GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 78  NTGRTPLHLAAWADHLEIVEVLLKHGADVNA-QDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 60.8 bits (146), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 41/117 (35%), Positives = 67/117 (57%), Gaps = 3/117 (2%)
Query: 227 LMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHS 286
           L+ A   G +  VR+L   GA+V  ++  GHTPL  AA  GH+ + ++LL+ GA +N   
Sbjct: 18  LLEAARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATG 77
Query: 287 NEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMD-GHVEVAKLL 342
           N  + + L LA +  HL++V  LL  GAD  +  D+      + S+D G+ ++A++L
Sbjct: 78  NTGR-TPLHLAAWADHLEIVEVLLKHGADV-NAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|4GRG|A Chain A, Crystal Structure Of Ige Complexed With E2_79, An Anti-Ige Inhibitor Length = 135

Iteration: 1
 Score = 58.9 bits (141), Expect = 9e-09,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 65/115 (56%), Gaps = 5/115 (4%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS- 591
           L+EAA+ G  + VR L  +GA V+A    G T L  A   GH ++ ++LL  GA+++ + 
Sbjct: 18  LLEAARAGQDDEVRILTANGADVNANDYWGHTPLHLAAMLGHLEIVEVLLKNGADVNATG 77
Query: 592 ----TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
               T L  AA   H  +V++LL     V+A+ + G TA   + +NG+ D+A++L
Sbjct: 78  NTGRTPLHLAAWADHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 77.0 bits (188), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 45/116 (38%), Positives = 70/116 (60%), Gaps = 1/116 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADVN     G TPL  A   GH  +V VLL+ GA+V   +
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAED 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
             G TPL  AA  GH+ + ++LL++GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 78  NFGITPLHLAAIRGHLEIVEVLLKHGADVNAQ-DKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 44/117 (37%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 227 LMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHS 286
           L+ A   G +  VR+L+  GA+V   +E+G TPL  AA  GH+ + ++LL+YGA +N   
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAED 77
Query: 287 NEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMD-GHVEVAKLL 342
           N F  + L LA  +GHL++V  LL  GAD  +  D+      + S+D G+ ++A++L
Sbjct: 78  N-FGITPLHLAAIRGHLEIVEVLLKHGADV-NAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 67.0 bits (162), Expect = 4e-11,   Method: Compositional matrix adjust.
 Identities = 44/115 (38%), Positives = 70/115 (60%), Gaps = 5/115 (4%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---D 589
           L+EAA+ G  + VR L+ +GA V+A  + G T L  A + GH ++ ++LL YGA++   D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAED 77
Query: 590 NS--TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
           N   T L  AA  GH  +V++LL     V+A+ + G TA   + +NG+ D+A++L
Sbjct: 78  NFGITPLHLAAIRGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3ZUV|B Chain B, Crystal Structure Of A Designed Selected Ankyrin Repeat Protein In Complex With The Phosphorylated Map Kinase Erk2 Length = 136

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 43/142 (30%), Positives = 70/142 (49%), Gaps = 34/142 (23%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL---D 650
           L+EAA+ G  + V++L+     V+A  + G T L  A + GH ++ ++LL YGA++   D
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNALDEDGLTPLHLAAQLGHLEIVEVLLKYGADVNAED 77
Query: 651 NS--TMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSG--VHAKT 706
           N   T L  AA  GH  +V++LL                           K G  V+A+ 
Sbjct: 78  NFGITPLHLAAIRGHLEIVEVLL---------------------------KHGADVNAQD 110
Query: 707 QTGDTALTYACENGHTDVADLL 728
           + G TA   + +NG+ D+A++L
Sbjct: 111 KFGKTAFDISIDNGNEDLAEIL 132

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 76.6 bits (187), Expect = 5e-14,   Method: Compositional matrix adjust.
 Identities = 55/190 (28%), Positives = 91/190 (47%), Gaps = 1/190 (0%)
Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           +V+A   G  +  ++L+  G  V +   E  +LL  A      +L +  ++  A V+  G
Sbjct: 13  IVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG 72
Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
                TPL  A   G + +V  L+ +GAD +     G + +  A   GH ++V  L+  G
Sbjct: 73  GDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG 132
Query: 247 ANVEDHNENGHTPLMEAASAGH-VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM 305
            +V+  ++NG TPLM AA   H V   ++LL +   +N      K +AL  A   G+  +
Sbjct: 133 QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTV 192
Query: 306 VRFLLSAGAD 315
           +  LL AGA+
Sbjct: 193 ISLLLEAGAN 202

>pdb|3EU9|A Chain A, The Ankyrin Repeat Domain Of Huntingtin Interacting Protein 14 Length = 240

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 52/159 (32%), Positives = 82/159 (51%), Gaps = 11/159 (6%)
Query: 512 LDVADFLLKNGANI-ELGA---STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALT 567
           +D+  + +  GA + +LG    STPL  A ++GHL +V  L+  GA        G + + 
Sbjct: 55  IDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIH 114
Query: 568 YACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHA-NVVQLLLDFPRSVHAKTQ 621
            A + GHT +   L++ G ++D       T L+ AA   H+ +  +LLL F  SV+   +
Sbjct: 115 LAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDK 174
Query: 622 T-GDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAA 659
              +TAL +A   G+T V  LLL  GAN+D   +  E+A
Sbjct: 175 YHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESA 213

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 76.3 bits (186), Expect = 6e-14,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 59/101 (58%)
Query: 186 GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245
           G K   TPL  AA +G  E V+ L++ GADVN +S  GNTPL  A   GH  +V++LL  
Sbjct: 5   GSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAK 64
Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHS 286
           GA+V   +++G+TP   A   GH  + K+L   GA +N  S
Sbjct: 65  GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARS 105

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 39/121 (32%), Positives = 64/121 (52%), Gaps = 28/121 (23%)
Query: 530 STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 589
           +TPL  AA+ GH E V+ LL  GA V+A+++ G+T L  A +NGH ++  LLL+ GA+  
Sbjct: 10  NTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD-- 67
Query: 590 NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 649
                                     V+A+++ G+T    A +NGH ++  LL + GA++
Sbjct: 68  --------------------------VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADV 101
Query: 650 D 650
           +
Sbjct: 102 N 102

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 55.8 bits (133), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 51/87 (58%), Gaps = 5/87 (5%)
Query: 589 DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
           D +T L  AAK GHA  V+ LL     V+A+++ G+T L  A +NGH ++  LLL+ GA+
Sbjct: 8   DGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67
Query: 649 L-----DNSTMLIEAAKGGHANVVQLL 670
           +     D +T    A K GH  +V+LL
Sbjct: 68  VNARSKDGNTPEHLAKKNGHHEIVKLL 94

>pdb|2L6B|A Chain A, Nrc Consensus Ankyrin Repeat Protein Solution Structure Length = 115

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 39/125 (31%), Positives = 62/125 (49%), Gaps = 30/125 (24%)
Query: 620 TQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFP 674
           ++ G+T L  A +NGH +    LLS GA++     D +T L  AAK GHA +V+LLL   
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL--- 62
Query: 675 RSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                                  K + V+A+++ G+T    A +NGH ++  LL + GA+
Sbjct: 63  ----------------------AKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD 100
Query: 735 LRNRT 739
           +  R+
Sbjct: 101 VNARS 105

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 74.7 bits (182), Expect = 2e-13,   Method: Compositional matrix adjust.
 Identities = 43/116 (37%), Positives = 69/116 (59%), Gaps = 1/116 (0%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADVN +   G TPL  A    H  +V VLL+ GA+V   +
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAID 77
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
             G TPL   A  GH+ + ++LL++GA +N   ++F ++A  ++   G+ D+   L
Sbjct: 78  AIGETPLHLVAMYGHLEIVEVLLKHGADVNAQ-DKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 40/115 (34%), Positives = 67/115 (58%), Gaps = 5/115 (4%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 589
           L+EAA+ G  + VR L+ +GA V+A+ + G T L  A  N H ++ ++LL  GA+++   
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAID 77
Query: 590 --NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
               T L   A  GH  +V++LL     V+A+ + G TA   + +NG+ D+A++L
Sbjct: 78  AIGETPLHLVAMYGHLEIVEVLLKHGADVNAQDKFGKTAFDISIDNGNEDLAEIL 132

>pdb|3HG0|D Chain D, Crystal Structure Of A Darpin In Complex With Orf49 From Lactococcal Phage Tp901-1 Length = 136

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 37/140 (26%), Positives = 66/140 (47%), Gaps = 30/140 (21%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 650
           L+EAA+ G  + V++L+     V+A+ + G T L  A  N H ++ ++LL  GA+++   
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAEDKVGLTPLHLAAMNDHLEIVEVLLKNGADVNAID 77
Query: 651 --NSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
               T L   A  GH  +V++LL                            + V+A+ + 
Sbjct: 78  AIGETPLHLVAMYGHLEIVEVLLKHG-------------------------ADVNAQDKF 112
Query: 709 GDTALTYACENGHTDVADLL 728
           G TA   + +NG+ D+A++L
Sbjct: 113 GKTAFDISIDNGNEDLAEIL 132

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Query: 124 ERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQV--LLAMHAN 181
           +R L++A   GDV+TVKKL T  +SV+    EG     L  +AGY  ++ V  LL   A+
Sbjct: 13  DRQLLEAAKAGDVETVKKLCTV-QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD 71
Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           V  +  KG   PL  A S G  E+  LL+ HGA VN       TPL  A A G   + ++
Sbjct: 72  VHAKD-KGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKL 130
Query: 242 LLECGANVEDHNENGHTPL 260
           LL+ GA+    N +G+TPL
Sbjct: 131 LLQHGADPTKKNRDGNTPL 149

>pdb|3TWQ|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 (Apo Form) Length = 175

Iteration: 1
 Score = 71.6 bits (174), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 54/135 (40%), Positives = 70/135 (51%), Gaps = 6/135 (4%)
Query: 521 NGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADL 580
           N  +IE   STPL  AA    + +V YLL  GA VHAK + G   L  AC  GH +VA+L
Sbjct: 38  NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAEL 97
Query: 581 LLSYG-----ANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGH 635
           L+ +G     A+L   T L EAA  G   + +LLL        K + G+T L    ++G 
Sbjct: 98  LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV-KDGD 156
Query: 636 TDVADLLLSYGANLD 650
           TD+ DLL    A LD
Sbjct: 157 TDIQDLLRGDAALLD 171

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Query: 124 ERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQV--LLAMHAN 181
           +R L++A   GDV+TVKKL T  +SV+    EG     L  +AGY  ++ V  LL   A+
Sbjct: 11  DRQLLEAAKAGDVETVKKLCTV-QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD 69
Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           V  +  KG   PL  A S G  E+  LL+ HGA VN       TPL  A A G   + ++
Sbjct: 70  VHAKD-KGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKL 128
Query: 242 LLECGANVEDHNENGHTPL 260
           LL+ GA+    N +G+TPL
Sbjct: 129 LLQHGADPTKKNRDGNTPL 147

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 521 NGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADL 580
           N  +IE   STPL  AA    + +V YLL  GA VHAK + G   L  AC  GH +VA+L
Sbjct: 36  NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAEL 95
Query: 581 LLSYG-----ANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGH 635
           L+ +G     A+L   T L EAA  G   + +LLL        K + G+T L    ++G 
Sbjct: 96  LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV-KDGD 154
Query: 636 TDVADLL 642
           TD+ DLL
Sbjct: 155 TDIQDLL 161

>pdb|3TWU|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human Mcl1 Length = 167

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 590 NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG--- 646
            ST L  AA     +VV+ LL     VHAK + G   L  AC  GH +VA+LL+ +G   
Sbjct: 44  QSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV 103
Query: 647 --ANLDNSTMLIEAAKGGHANVVQLLL 671
             A+L   T L EAA  G   + +LLL
Sbjct: 104 NVADLWKFTPLHEAAAKGKYEICKLLL 130

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 73.9 bits (180), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 55/139 (39%), Positives = 75/139 (53%), Gaps = 4/139 (2%)
Query: 124 ERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQV--LLAMHAN 181
           +R L++A   GDV+TVKKL T  +SV+    EG     L  +AGY  ++ V  LL   A+
Sbjct: 9   DRQLLEAAKAGDVETVKKLCTV-QSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD 67
Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           V  +  KG   PL  A S G  E+  LL+ HGA VN       TPL  A A G   + ++
Sbjct: 68  VHAKD-KGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKL 126
Query: 242 LLECGANVEDHNENGHTPL 260
           LL+ GA+    N +G+TPL
Sbjct: 127 LLQHGADPTKKNRDGNTPL 145

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 52/153 (33%), Positives = 83/153 (54%), Gaps = 9/153 (5%)
Query: 194 LMEAASSGFIEIVRLLIN----HGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
           L+EAA +G +E V+ L      +  D+ G+ S   TPL +A      +VV  LL+ GA+V
Sbjct: 12  LLEAAKAGDVETVKKLCTVQSVNCRDIEGRQS---TPLHFAAGYNRVSVVEYLLQHGADV 68
Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
              ++ G  PL  A S GH  VA++L+++GA +N  ++ +K + L  A  KG  ++ + L
Sbjct: 69  HAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV-ADLWKFTPLHEAAAKGKYEICKLL 127
Query: 310 LSAGADQEHKTDEMHTALMEASMDGHVEVAKLL 342
           L  GAD   K  + +T L +   DG  ++  LL
Sbjct: 128 LQHGADPTKKNRDGNTPL-DLVKDGDTDIQDLL 159

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 70.1 bits (170), Expect = 4e-12,   Method: Compositional matrix adjust.
 Identities = 51/127 (40%), Positives = 67/127 (52%), Gaps = 6/127 (4%)
Query: 521 NGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADL 580
           N  +IE   STPL  AA    + +V YLL  GA VHAK + G   L  AC  GH +VA+L
Sbjct: 34  NCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAEL 93
Query: 581 LLSYG-----ANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGH 635
           L+ +G     A+L   T L EAA  G   + +LLL        K + G+T L    ++G 
Sbjct: 94  LVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLV-KDGD 152
Query: 636 TDVADLL 642
           TD+ DLL
Sbjct: 153 TDIQDLL 159

>pdb|3TWR|A Chain A, Crystal Structure Of Arc4 From Human Tankyrase 2 In Complex With Peptide From Human 3bp2 Length = 165

Iteration: 1
 Score = 45.8 bits (107), Expect = 8e-05,   Method: Compositional matrix adjust.
 Identities = 35/87 (40%), Positives = 45/87 (51%), Gaps = 5/87 (5%)
Query: 590 NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG--- 646
            ST L  AA     +VV+ LL     VHAK + G   L  AC  GH +VA+LL+ +G   
Sbjct: 42  QSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVV 101
Query: 647 --ANLDNSTMLIEAAKGGHANVVQLLL 671
             A+L   T L EAA  G   + +LLL
Sbjct: 102 NVADLWKFTPLHEAAAKGKYEICKLLL 128

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 54/89 (60%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           TPLM AA+ G I +V  L+ +GAD         + L  AC+ G+  +V++LL+CG +V +
Sbjct: 54  TPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE 113
Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGA 280
           ++ NG TPL+ A    HV   K+LLE GA
Sbjct: 114 YDWNGGTPLLYAVHGNHVKCVKMLLESGA 142

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 248 NVEDH-NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
           NV +H +E G TPLM AA+ G + V + LL+ GA       + +ESAL+LAC KG+ D+V
Sbjct: 43  NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL-LGKGRESALSLACSKGYTDIV 101
Query: 307 RFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           + LL  G D         T L+ A    HV+  K+LL+SGA
Sbjct: 102 KMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 142

>pdb|3V2O|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 183

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
           TPLM AA  G + +V +LL +GA      +  ++AL+ AC  G+TD+  +LL  G +++ 
Sbjct: 54  TPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE 113
Query: 591 -----STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
                 T L+ A  G H   V++LL+       +T +G  ++  A   G+  V  ++ S+
Sbjct: 114 YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 173

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 73.6 bits (179), Expect = 4e-13,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 54/89 (60%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           TPLM AA+ G I +V  L+ +GAD         + L  AC+ G+  +V++LL+CG +V +
Sbjct: 36  TPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE 95
Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGA 280
           ++ NG TPL+ A    HV   K+LLE GA
Sbjct: 96  YDWNGGTPLLYAVHGNHVKCVKMLLESGA 124

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 248 NVEDH-NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
           NV +H +E G TPLM AA+ G + V + LL+ GA       + +ESAL+LAC KG+ D+V
Sbjct: 25  NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL-LGKGRESALSLACSKGYTDIV 83
Query: 307 RFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           + LL  G D         T L+ A    HV+  K+LL+SGA
Sbjct: 84  KMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 124

>pdb|3SO8|A Chain A, Crystal Structure Of Ankra Length = 162

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
           TPLM AA  G + +V +LL +GA      +  ++AL+ AC  G+TD+  +LL  G +++ 
Sbjct: 36  TPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE 95
Query: 591 -----STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
                 T L+ A  G H   V++LL+       +T +G  ++  A   G+  V  ++ S+
Sbjct: 96  YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 155

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Compositional matrix adjust.
 Identities = 37/89 (41%), Positives = 54/89 (60%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           TPLM AA+ G I +V  L+ +GAD         + L  AC+ G+  +V++LL+CG +V +
Sbjct: 38  TPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE 97
Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGA 280
           ++ NG TPL+ A    HV   K+LLE GA
Sbjct: 98  YDWNGGTPLLYAVHGNHVKCVKMLLESGA 126

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 67.8 bits (164), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/101 (42%), Positives = 59/101 (58%), Gaps = 2/101 (1%)
Query: 248 NVEDH-NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
           NV +H +E G TPLM AA+ G + V + LL+ GA       + +ESAL+LAC KG+ D+V
Sbjct: 27  NVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL-LGKGRESALSLACSKGYTDIV 85
Query: 307 RFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           + LL  G D         T L+ A    HV+  K+LL+SGA
Sbjct: 86  KMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGA 126

>pdb|3V2X|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Ankra2 Length = 167

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 36/120 (30%), Positives = 62/120 (51%), Gaps = 5/120 (4%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
           TPLM AA  G + +V +LL +GA      +  ++AL+ AC  G+TD+  +LL  G +++ 
Sbjct: 38  TPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGYTDIVKMLLDCGVDVNE 97
Query: 591 -----STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
                 T L+ A  G H   V++LL+       +T +G  ++  A   G+  V  ++ S+
Sbjct: 98  YDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESH 157

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 73.2 bits (178), Expect = 5e-13,   Method: Composition-based stats.
 Identities = 46/124 (37%), Positives = 67/124 (54%), Gaps = 1/124 (0%)
Query: 160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
           L +AC  G       L+     +ED+ I+G  T L+ A  +  + I   L++ G++VN +
Sbjct: 39  LMVACMLGMENAIDKLVENFDKLEDKDIEGS-TALIWAVKNNRLGIAEKLLSKGSNVNTK 97
Query: 220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             SG TPLM++   G+  +   LLE GANV D N  G TPL+ A+  G   + K LLE G
Sbjct: 98  DFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELG 157
Query: 280 AGIN 283
           A I+
Sbjct: 158 ADIS 161

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 65.5 bits (158), Expect = 1e-10,   Method: Composition-based stats.
 Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 3/140 (2%)
Query: 210 INHGADV--NGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG 267
           IN   D   N + S   TPLM AC  G E  +  L+E    +ED +  G T L+ A    
Sbjct: 20  INQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNN 79
Query: 268 HVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTAL 327
            +G+A+ LL  G+ +NT     K + L  +   G+ +M  FLL  GA+   +  E  T L
Sbjct: 80  RLGIAEKLLSKGSNVNTKDFSGK-TPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPL 138
Query: 328 MEASMDGHVEVAKLLLDSGA 347
           + AS  G  E+ K LL+ GA
Sbjct: 139 IVASKYGRSEIVKKLLELGA 158

>pdb|2RFM|A Chain A, Structure Of A Thermophilic Ankyrin Repeat Protein Length = 192

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 47/181 (25%), Positives = 82/181 (45%), Gaps = 33/181 (18%)
Query: 443 TPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHXXXXXXXX 502
           TPLM A   G +  +++ V  + + +    DK + G   S  LI   K N          
Sbjct: 37  TPLMVACMLGMENAIDKLVENFDKLE----DKDIEG---STALIWAVKNNR--------- 80
Query: 503 XXXXCCGGFLDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKT 559
                    L +A+ LL  G+N+   +    TPLM +   G+ E+  +LL+ GA V+ + 
Sbjct: 81  ---------LGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRN 131
Query: 560 QTGDTALTYACENGHTDVADLLLSYGANL---DNSTMLIEAAKG--GHANVVQLLLDFPR 614
             G+T L  A + G +++   LL  GA++   D + +  EA+    G   V+++  +  R
Sbjct: 132 LEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEVRR 191
Query: 615 S 615
           +
Sbjct: 192 A 192

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 70.5 bits (171), Expect = 3e-12,   Method: Compositional matrix adjust.
 Identities = 85/275 (30%), Positives = 121/275 (44%), Gaps = 23/275 (8%)
Query: 11  VKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM 70
           V+ V+ LL  G  VH     G   L  ACS G+YE+ ++LL   A V    +  + TPL 
Sbjct: 71  VRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDL-WQFTPLH 129
Query: 71  EAASSG---FGKLATGDGKLADPEVLRRLTSSVSCALDEAA--AALTRMRNENPRPQNER 125
           EAAS        L    G  ADP +       V+C    A   A    +R          
Sbjct: 130 EAASKNRVEVCSLLLSHG--ADPTL-------VNCHGKSAVDMAPTPELRERLTYEFKGH 180
Query: 126 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY---YELAQVLLAMHANV 182
           SL+QA  + D+  VKK L       +     E+ L  A ++ +    ++A++LL   ANV
Sbjct: 181 SLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV 240
Query: 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVL 242
            ++  K   TPL  AA     +++ +L  HGA +N   S G T L  A   GH    R+L
Sbjct: 241 NEKN-KDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLL 299
Query: 243 LECGANVEDHNENGHTPLMEAASAGHVGVAKILLE 277
           L  G++    +  G T    AA  G+  V +IL E
Sbjct: 300 LSYGSDPSIISLQGFT----AAQMGNEAVQQILSE 330

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 69.3 bits (168), Expect = 7e-12,   Method: Compositional matrix adjust.
 Identities = 62/181 (34%), Positives = 83/181 (45%), Gaps = 23/181 (12%)
Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
           + TPL  AA    + IV+LL+ HGADV+ +   G  PL  AC+ GH  V  +LL+ GA V
Sbjct: 58  KSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACV 117
Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAG---INTH-----------------SNEF 289
              +    TPL EAAS   V V  +LL +GA    +N H                 + EF
Sbjct: 118 NAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEF 177
Query: 290 KESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHV---EVAKLLLDSG 346
           K  +L  A  +  L  V+  L+       +     TAL  A    H    +VA+LLL  G
Sbjct: 178 KGHSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKG 237
Query: 347 A 347
           A
Sbjct: 238 A 238

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 61.6 bits (148), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 87/295 (29%), Positives = 128/295 (43%), Gaps = 48/295 (16%)
Query: 387 VKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM 446
           V+ V+ LL  G  VH     G   L  ACS G+YE+ ++LL   A V    +  + TPL 
Sbjct: 71  VRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDL-WQFTPLH 129
Query: 447 EAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHXXXXXXXXXXXX 506
           EAAS  R     E  S    H   P   + +G +++V + P  +                
Sbjct: 130 EAASKNRV----EVCSLLLSHGADPTLVNCHG-KSAVDMAPTPE---------------- 168
Query: 507 CCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTAL 566
                       L+     E    + L++AA+E  L  V+  L        + Q+ +TAL
Sbjct: 169 ------------LRERLTYEFKGHS-LLQAAREADLAKVKKTLALEIINFKQPQSHETAL 215
Query: 567 TYACENGHT---DVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHA 618
             A  + H     VA+LLL  GAN+     D  T L  AA+  H +V+++L      ++A
Sbjct: 216 HCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNA 275
Query: 619 KTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIE---AAKGGHANVVQLL 670
               G TAL  A   GH     LLLSYG+  D S + ++   AA+ G+  V Q+L
Sbjct: 276 LDSLGQTALHRAALAGHLQTCRLLLSYGS--DPSIISLQGFTAAQMGNEAVQQIL 328

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 37/86 (43%), Positives = 45/86 (52%), Gaps = 5/86 (5%)
Query: 530 STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA--- 586
           STPL  AA    + +V+ LL  GA VHAK + G   L  AC  GH +V +LLL +GA   
Sbjct: 59  STPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVN 118
Query: 587 --NLDNSTMLIEAAKGGHANVVQLLL 610
             +L   T L EAA      V  LLL
Sbjct: 119 AMDLWQFTPLHEAASKNRVEVCSLLL 144

>pdb|3UTM|A Chain A, Crystal Structure Of A Mouse Tankyrase-Axin Complex Length = 351

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 71/258 (27%), Positives = 103/258 (39%), Gaps = 62/258 (24%)
Query: 514 VADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYAC 570
           +   LL++GA++   + G   PL  A   GH E+   LL  GA V+A      T L  A 
Sbjct: 73  IVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAA 132
Query: 571 ENGHTDVADLLLSYGAN-----------LDNSTM---------------LIEAAKGGHAN 604
                +V  LLLS+GA+           +D +                 L++AA+     
Sbjct: 133 SKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQAAREADLA 192
Query: 605 VVQLLLDFPRSVHAKTQTGDTALTYACENGHT---DVADLLLSYGANL-----DNSTMLI 656
            V+  L        + Q+ +TAL  A  + H     VA+LLL  GAN+     D  T L 
Sbjct: 193 KVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLH 252
Query: 657 EAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQTGDTALTYA 716
            AA+  H +V+++L                          G K  ++A    G TAL  A
Sbjct: 253 VAAERAHNDVMEVL-----------------------HKHGAK--MNALDSLGQTALHRA 287
Query: 717 CENGHTDVADLLLSYGAN 734
              GH     LLLSYG++
Sbjct: 288 ALAGHLQTCRLLLSYGSD 305

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 68.2 bits (165), Expect = 2e-11,   Method: Compositional matrix adjust.
 Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 7/137 (5%)
Query: 513 DVADFLLKNGANI--ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYAC 570
           D    L+ NGA    +   ++PL  AAQ GH      LL +G    A+T+   T L  A 
Sbjct: 16  DEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAA 75
Query: 571 ENGHTDVADLLLSYGANLDNSTMLI-----EAAKGGHANVVQLLLDFPRSVHAKTQTGDT 625
             GH ++ ++LL +GA+++   ML       A +  H  VV+LL+ +   VH +++   T
Sbjct: 76  SEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKT 135
Query: 626 ALTYACENGHTDVADLL 642
           A   + +NG+ D+A++L
Sbjct: 136 AFDISIDNGNEDLAEIL 152

>pdb|1AWC|B Chain B, Mouse Gabp AlphaBETA DOMAIN BOUND TO DNA Length = 153

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 42/151 (27%), Positives = 69/151 (45%), Gaps = 31/151 (20%)
Query: 594 LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 650
           L+EAA+ G  + V++L+    +       G + L  A + GH    ++LL  G + D   
Sbjct: 6   LLEAARAGQDDEVRILM-ANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART 64
Query: 651 --NSTMLIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQT 708
             + T L  AA  GHAN+V++LL                            + V+AK   
Sbjct: 65  KVDRTPLHMAASEGHANIVEVLLK-------------------------HGADVNAKDML 99
Query: 709 GDTALTYACENGHTDVADLLLSYGANLRNRT 739
             TAL +A E+ H +V +LL+ YGA++  ++
Sbjct: 100 KMTALHWATEHNHQEVVELLIKYGADVHTQS 130

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 66.6 bits (161), Expect = 5e-11,   Method: Composition-based stats.
 Identities = 48/148 (32%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 121 PQNERSLVQACSDGDVKTVKKLLTEGRS-VHETTDEGESLLSLACSAGYYELAQVLLAMH 179
           P+    +   C +G+   V+  L    + +++  D G S L  AC  G   + ++L+   
Sbjct: 3   PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRG 62
Query: 180 A--NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA 237
           A  NV +RG   + TPL  AAS G  +IV+ L+ + AD+N  +  GN PL YAC  G + 
Sbjct: 63  ARINVMNRG---DDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQ 119
Query: 238 VVRVLLECGANVEDHNENGHTPLMEAAS 265
           V   L+  GA V   N+ G  P+ +A +
Sbjct: 120 VAEDLVANGALVSICNKYGEMPVDKAKA 147

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 206 VRL-LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAA 264
           VRL L N   D+N     G +PL +AC  G  AVV +L+  GA +   N    TPL  AA
Sbjct: 21  VRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAA 80
Query: 265 SAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
           S GH  + + LL+Y A IN   NE     L  AC+ G   +   L++ GA
Sbjct: 81  SHGHRDIVQKLLQYKADINA-VNEHGNVPLHYACFWGQDQVAEDLVANGA 129

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 538 QEGHLELVRYLLDSGAQ-VHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NS 591
           +EG+   VR  LD+    ++     G + L +AC  G + V ++L+  GA ++     + 
Sbjct: 14  REGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDD 73
Query: 592 TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA 647
           T L  AA  GH ++VQ LL +   ++A  + G+  L YAC  G   VA+ L++ GA
Sbjct: 74  TPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGA 129

>pdb|3F6Q|A Chain A, Crystal Structure Of Integrin-Linked Kinase Ankyrin Repeat Domain In Complex With Pinch1 Lim1 Domain Length = 179

Iteration: 1
 Score = 43.1 bits (100), Expect = 6e-04,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 601 GHANVVQLLLDFPRS-VHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTM 654
           G+A  V+L LD   + ++     G + L +AC  G + V ++L+  GA ++     + T 
Sbjct: 16  GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP 75
Query: 655 LIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQTGDTALT 714
           L  AA  GH ++VQ LL +                         K+ ++A  + G+  L 
Sbjct: 76  LHLAASHGHRDIVQKLLQY-------------------------KADINAVNEHGNVPLH 110
Query: 715 YACENGHTDVADLLLSYGA 733
           YAC  G   VA+ L++ GA
Sbjct: 111 YACFWGQDQVAEDLVANGA 129

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 65.9 bits (159), Expect = 8e-11,   Method: Composition-based stats.
 Identities = 47/138 (34%), Positives = 72/138 (52%), Gaps = 6/138 (4%)
Query: 131 CSDGDVKTVKKLLTEGRS-VHETTDEGESLLSLACSAGYYELAQVLLAMHA--NVEDRGI 187
           C +G+   V+  L    + +++  D G S L  AC  G   + ++L+   A  NV +RG 
Sbjct: 8   CREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRG- 66
Query: 188 KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA 247
             + TPL  AAS G  +IV+ L+ + AD+N  +  GN PL YAC  G + V   L+  GA
Sbjct: 67  --DDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGA 124
Query: 248 NVEDHNENGHTPLMEAAS 265
            V   N+ G  P+ +A +
Sbjct: 125 LVSICNKYGEMPVDKAKA 142

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Composition-based stats.
 Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 206 VRL-LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAA 264
           VRL L N   D+N     G +PL +AC  G  AVV +L+  GA +   N    TPL  AA
Sbjct: 16  VRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAA 75
Query: 265 SAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
           S GH  + + LL+Y A IN   NE     L  AC+ G   +   L++ GA
Sbjct: 76  SHGHRDIVQKLLQYKADINA-VNEHGNVPLHYACFWGQDQVAEDLVANGA 124

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Composition-based stats.
 Identities = 37/116 (31%), Positives = 61/116 (52%), Gaps = 6/116 (5%)
Query: 538 QEGHLELVRYLLDSGAQ-VHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NS 591
           +EG+   VR  LD+    ++     G + L +AC  G + V ++L+  GA ++     + 
Sbjct: 9   REGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDD 68
Query: 592 TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA 647
           T L  AA  GH ++VQ LL +   ++A  + G+  L YAC  G   VA+ L++ GA
Sbjct: 69  TPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGA 124

>pdb|2KBX|A Chain A, Solution Structure Of Ilk-Pinch Complex Length = 171

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Composition-based stats.
 Identities = 38/139 (27%), Positives = 63/139 (45%), Gaps = 31/139 (22%)
Query: 601 GHANVVQLLLDFPRS-VHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTM 654
           G+A  V+L LD   + ++     G + L +AC  G + V ++L+  GA ++     + T 
Sbjct: 11  GNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTP 70
Query: 655 LIEAAKGGHANVVQLLLDFPRSVIGGXXXXXXXXXXXXXXXQGKKSGVHAKTQTGDTALT 714
           L  AA  GH ++VQ LL +                         K+ ++A  + G+  L 
Sbjct: 71  LHLAASHGHRDIVQKLLQY-------------------------KADINAVNEHGNVPLH 105
Query: 715 YACENGHTDVADLLLSYGA 733
           YAC  G   VA+ L++ GA
Sbjct: 106 YACFWGQDQVAEDLVANGA 124

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 48/133 (36%), Positives = 73/133 (54%), Gaps = 5/133 (3%)
Query: 216 VNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NVEDHNENGHTPLMEAASAG---HVGV 271
           VN   S+GNT L Y+ +  +  VV+ LL+ G   V+  N  G++P+M  A A       +
Sbjct: 104 VNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDI 163
Query: 272 AKILLEYGAG-INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEA 330
             +L  +  G IN  +++  ++AL LA   G +D+V+ LL+  AD   + D+  TALM A
Sbjct: 164 ETVLQLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCA 223
Query: 331 SMDGHVEVAKLLL 343
              GH E+A LLL
Sbjct: 224 CEHGHKEIAGLLL 236

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 30/85 (35%), Positives = 46/85 (54%), Gaps = 6/85 (7%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA---- 586
           T LM A   G +++V+ LL   A V+ +   G TAL  ACE+GH ++A LLL+  +    
Sbjct: 185 TALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDIS 244
Query: 587 --NLDNSTMLIEAAKGGHANVVQLL 609
             + D ST L+ A   G + +  +L
Sbjct: 245 LTDRDGSTALMVALDAGQSEIASML 269

>pdb|4HBD|A Chain A, Crystal Structure Of Kank2 Ankyrin Repeats Length = 276

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 43/158 (27%), Positives = 73/158 (46%), Gaps = 17/158 (10%)
Query: 530 STPLMEAAQEGHLELVRYLLDSGA-QVHAKTQTGDTALTY---ACENGHTDVADLL---- 581
           +T L  +    +  +V+ LLDSG  +V  + + G + +     A      D+  +L    
Sbjct: 112 NTALHYSVSHANFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFR 171
Query: 582 ---LSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDV 638
              ++  A+    T L+ A   G  +VV+ LL     V+ +   G TAL  ACE+GH ++
Sbjct: 172 LGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEI 231
Query: 639 ADLLLSYGA------NLDNSTMLIEAAKGGHANVVQLL 670
           A LLL+  +      + D ST L+ A   G + +  +L
Sbjct: 232 AGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASML 269

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 63.5 bits (153), Expect = 4e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 126 SLVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVED 184
           S+ Q  + G++  +K+ L +G ++    DE G + L  A + G  E  + LL   A+   
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI 64
Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
              + E   L  A++ G+ +IV LL+    D+N    +G TPL+YA  G H   V  LL 
Sbjct: 65  LAKERESA-LSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123
Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
            GA++    ++G+TP+  A + G+  V +++
Sbjct: 124 RGADLTTEADSGYTPMDLAVALGYRKVQQVI 154

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVL 242
           ++RG     TPL+ A++ G IE VR L+  GAD +  +    + L  A  GG+  +V +L
Sbjct: 33  DERGF----TPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLL 88
Query: 243 LECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSN 287
           LE   ++  ++ NG TPL+ A    HV   + LL  GA + T ++
Sbjct: 89  LERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEAD 133

>pdb|3V30|A Chain A, Crystal Structure Of The Peptide Bound Complex Of The Ankyrin Repeat Domains Of Human Rfxank Length = 172

Iteration: 1
 Score = 55.1 bits (131), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 65/130 (50%), Gaps = 5/130 (3%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-- 588
           TPL+ A+  G +E VR+LL+ GA  H   +  ++AL+ A   G+TD+  LLL    ++  
Sbjct: 38  TPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINI 97
Query: 589 ---DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
              +  T L+ A +G H   V+ LL     +  +  +G T +  A   G+  V  ++ ++
Sbjct: 98  YDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157
Query: 646 GANLDNSTML 655
              L  S ++
Sbjct: 158 ILKLFQSNLV 167

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 63.2 bits (152), Expect = 5e-10,   Method: Compositional matrix adjust.
 Identities = 45/151 (29%), Positives = 78/151 (51%), Gaps = 2/151 (1%)
Query: 126 SLVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVED 184
           S+ Q  + G++  +K+ L +G ++    DE G + L  A + G  E  + LL   A+   
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI 64
Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
              + E   L  A++ G+ +IV LL+    D+N    +G TPL+YA  G H   V  LL 
Sbjct: 65  LAKERESA-LSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLA 123
Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
            GA++    ++G+TP+  A + G+  V +++
Sbjct: 124 RGADLTTEADSGYTPMDLAVALGYRKVQQVI 154

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 60.1 bits (144), Expect = 4e-09,   Method: Compositional matrix adjust.
 Identities = 36/105 (34%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVL 242
           ++RG     TPL+ A++ G IE VR L+  GAD +  +    + L  A  GG+  +V +L
Sbjct: 33  DERGF----TPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLL 88
Query: 243 LECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSN 287
           LE   ++  ++ NG TPL+ A    HV   + LL  GA + T ++
Sbjct: 89  LERDVDINIYDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEAD 133

>pdb|3UXG|A Chain A, Crystal Structure Of Rfxank Length = 172

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 37/130 (28%), Positives = 64/130 (49%), Gaps = 5/130 (3%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-- 588
           TPL+ A+  G +E VR+LL+ GA  H   +  ++AL+ A   G+TD+  LLL    ++  
Sbjct: 38  TPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDINI 97
Query: 589 ---DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
              +  T L+ A  G H   V+ LL     +  +  +G T +  A   G+  V  ++ ++
Sbjct: 98  YDWNGGTPLLYAVHGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENH 157
Query: 646 GANLDNSTML 655
              L  S ++
Sbjct: 158 ILKLFQSNLV 167

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 62.0 bits (149), Expect = 1e-09,   Method: Compositional matrix adjust.
 Identities = 40/96 (41%), Positives = 53/96 (55%), Gaps = 1/96 (1%)
Query: 188 KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA 247
           +GE T L  A+  G I  V  L+ +G+D N +  +G TPL  AC  GH  VV +LL+  A
Sbjct: 9   RGE-TLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKA 67
Query: 248 NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGIN 283
            V        +PL +AA  GHV + K+LL YGA  N
Sbjct: 68  LVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN 103

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 56.6 bits (135), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 32/80 (40%), Positives = 45/80 (56%), Gaps = 3/80 (3%)
Query: 510 GFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTAL 566
           G +   ++LL+NG++  +      TPL EA   GHL++V  LL   A V+      D+ L
Sbjct: 21  GDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPL 80
Query: 567 TYACENGHTDVADLLLSYGA 586
             A +NGH D+  LLLSYGA
Sbjct: 81  HDAAKNGHVDIVKLLLSYGA 100

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 54.3 bits (129), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 37/104 (35%), Positives = 56/104 (53%), Gaps = 5/104 (4%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD- 589
           T L  A+ +G +  V YLL +G+  + K   G T L  AC +GH  V +LLL + A ++ 
Sbjct: 12  TLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT 71
Query: 590 ----NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTY 629
               N + L +AAK GH ++V+LLL +  S +A    G   + Y
Sbjct: 72  TGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDY 115

>pdb|3C5R|A Chain A, Crystal Structure Of The Bard1 Ankyrin Repeat Domain And Its Functional Consequences Length = 137

Iteration: 1
 Score = 45.1 bits (105), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 592 TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD- 650
           T+L  A+  G    V+ LL      + K   G T L  AC +GH  V +LLL + A ++ 
Sbjct: 12  TLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNT 71
Query: 651 ----NSTMLIEAAKGGHANVVQLLLDF 673
               N + L +AAK GH ++V+LLL +
Sbjct: 72  TGYQNDSPLHDAAKNGHVDIVKLLLSY 98

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 60.8 bits (146), Expect = 2e-09,   Method: Compositional matrix adjust.
 Identities = 77/264 (29%), Positives = 113/264 (42%), Gaps = 29/264 (10%)
Query: 53  MHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLAD--PEVLRRLT---SSVSCALDEA 107
           M  NV  RG  G  TPLM A+ SG G L TG+ +  +  P V+       +S+    D  
Sbjct: 1   MDVNV--RGPDG-FTPLMIASCSG-GGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRT 56
Query: 108 AAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG 167
            A    +     R    + L++A +D +++                + G + L  A SA 
Sbjct: 57  GATALHLAAAYSRSDAAKRLLEASADANIQD---------------NMGRTPLHAAVSAD 101
Query: 168 YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPL 227
              + Q+L+   A   D  +    TPL+ AA      ++  LIN  ADVN     G + L
Sbjct: 102 AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 161
Query: 228 MYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG--INTH 285
            +A A  +     VLL+ GAN +  N    TPL  AA  G    AK+LL++ A   I  H
Sbjct: 162 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDH 221
Query: 286 SNEFKESALTLACYKGHLDMVRFL 309
            +        +A  + H D+VR L
Sbjct: 222 MDRLPRD---IAQERMHHDIVRLL 242

>pdb|2HE0|A Chain A, Crystal Structure Of A Human Notch1 Ankyrin Domain Mutant Length = 253

Iteration: 1
 Score = 50.8 bits (120), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 46/155 (29%), Positives = 78/155 (50%), Gaps = 2/155 (1%)
Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NV 249
            T L  AA+    +  + L+   AD N Q + G TPL  A +   + V ++L+   A ++
Sbjct: 58  ATALHLAAAYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDL 117
Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           +    +G TPL+ AA     G+ + L+   A +N   ++  +SAL  A    ++D    L
Sbjct: 118 DARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVL 176
Query: 310 LSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344
           L  GA+++ + +   T L  A+ +G  E AK+LLD
Sbjct: 177 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLD 211

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 60.5 bits (145), Expect = 3e-09,   Method: Compositional matrix adjust.
 Identities = 53/178 (29%), Positives = 86/178 (48%), Gaps = 13/178 (7%)
Query: 90  PEVLRRLTSS--VSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGR 147
           P V+R L ++     ALD        +  E+  P   R+L+ + + G +        E R
Sbjct: 59  PSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDL------EAR 112
Query: 148 SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVR 207
           +      +G + L +A +    E  Q+LL   A+++   IK   +PL+ A  +  + +V+
Sbjct: 113 NY-----DGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ 167
Query: 208 LLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAAS 265
           LL+ HGA+VN Q  SG++ L  A   G   +VR L+  GA+    N +  TPLM A S
Sbjct: 168 LLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARS 225

>pdb|1K1B|A Chain A, Crystal Structure Of The Ankyrin Repeat Domain Of Bcl-3: A Unique Member Of The Ikappab Protein Family Length = 241

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 50/162 (30%), Positives = 71/162 (43%), Gaps = 4/162 (2%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA---- 247
           TPL  A  +    +VRLL+  GA        G T    AC       +R LL+  A    
Sbjct: 48  TPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTL 107
Query: 248 NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVR 307
           ++E  N +G T L  A +       ++LLE GA I+    +   S L  A     L MV+
Sbjct: 108 DLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ 167
Query: 308 FLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQS 349
            LL  GA+   +     +AL  AS  G + + + L+ SGA S
Sbjct: 168 LLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADS 209

>pdb|1IKN|D Chain D, IkappabalphaNF-Kappab Complex Length = 236

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           TPL  A  +   EI   L+  G D   +   GNTPL  AC  G  A V VL +       
Sbjct: 47  TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 106
Query: 252 H------NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM 305
           H      N NGHT L  A+  G++G+ ++L+  GA +N        +AL LA    + D+
Sbjct: 107 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 166
Query: 306 VRFLLSAGAD 315
           V  LL  GAD
Sbjct: 167 VSLLLKCGAD 176

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 112/264 (42%), Gaps = 29/264 (10%)
Query: 53  MHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLAD--PEVLRRLT---SSVSCALDEA 107
           M  NV  RG  G  TPLM A+ SG G L TG+ +  +  P V+       +S+    D  
Sbjct: 1   MDVNV--RGPDG-FTPLMIASCSG-GGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRT 56
Query: 108 AAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG 167
                 +     R    + L++A +D +++                + G + L  A SA 
Sbjct: 57  GETALHLAARYSRSDAAKRLLEASADANIQD---------------NMGRTPLHAAVSAD 101
Query: 168 YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPL 227
              + Q+L+   A   D  +    TPL+ AA      ++  LIN  ADVN     G + L
Sbjct: 102 AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 161
Query: 228 MYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG--INTH 285
            +A A  +     VLL+ GAN +  N    TPL  AA  G    AK+LL++ A   I  H
Sbjct: 162 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDH 221
Query: 286 SNEFKESALTLACYKGHLDMVRFL 309
            +        +A  + H D+VR L
Sbjct: 222 MDRLPRD---IAQERMHHDIVRLL 242

>pdb|1YYH|A Chain A, Crystal Structure Of The Human Notch 1 Ankyrin Domain Length = 253

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NVE 250
           T L  AA     +  + L+   AD N Q + G TPL  A +   + V ++L+   A +++
Sbjct: 59  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 118
Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
               +G TPL+ AA     G+ + L+   A +N   ++  +SAL  A    ++D    LL
Sbjct: 119 ARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLL 177
Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344
             GA+++ + +   T L  A+ +G  E AK+LLD
Sbjct: 178 KNGANKDMQNNREETPLFLAAREGSYETAKVLLD 211

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 59.7 bits (143), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 76/264 (28%), Positives = 112/264 (42%), Gaps = 29/264 (10%)
Query: 53  MHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLAD--PEVLRRLT---SSVSCALDEA 107
           M  NV  RG  G  TPLM A+ SG G L TG+ +  +  P V+       +S+    D  
Sbjct: 2   MDVNV--RGPDG-FTPLMIASCSG-GGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRT 57
Query: 108 AAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG 167
                 +     R    + L++A +D +++                + G + L  A SA 
Sbjct: 58  GETALHLAARYSRSDAAKRLLEASADANIQD---------------NMGRTPLHAAVSAD 102
Query: 168 YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPL 227
              + Q+L+   A   D  +    TPL+ AA      ++  LIN  ADVN     G + L
Sbjct: 103 AQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSAL 162
Query: 228 MYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG--INTH 285
            +A A  +     VLL+ GAN +  N    TPL  AA  G    AK+LL++ A   I  H
Sbjct: 163 HWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDH 222
Query: 286 SNEFKESALTLACYKGHLDMVRFL 309
            +        +A  + H D+VR L
Sbjct: 223 MDRLPRD---IAQERMHHDIVRLL 243

>pdb|2F8X|K Chain K, Crystal Structure Of Activated Notch, Csl And Maml On Hes-1 Promoter Dna Sequence Length = 256

Iteration: 1
 Score = 50.4 bits (119), Expect = 4e-06,   Method: Compositional matrix adjust.
 Identities = 46/154 (29%), Positives = 77/154 (50%), Gaps = 2/154 (1%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NVE 250
           T L  AA     +  + L+   AD N Q + G TPL  A +   + V ++L+   A +++
Sbjct: 60  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 119
Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
               +G TPL+ AA     G+ + L+   A +N   ++  +SAL  A    ++D    LL
Sbjct: 120 ARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLL 178
Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344
             GA+++ + +   T L  A+ +G  E AK+LLD
Sbjct: 179 KNGANKDMQNNREETPLFLAAREGSYETAKVLLD 212

>pdb|1NFI|E Chain E, I-Kappa-B-AlphaNF-Kappa-B Complex Length = 213

Iteration: 1
 Score = 59.3 bits (142), Expect = 7e-09,   Method: Compositional matrix adjust.
 Identities = 46/130 (35%), Positives = 61/130 (46%), Gaps = 6/130 (4%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           TPL  A  +   EI   L+  G D   +   GNTPL  AC  G  A V VL +       
Sbjct: 44  TPLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 103
Query: 252 H------NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM 305
           H      N NGHT L  A+  G++G+ ++L+  GA +N        +AL LA    + D+
Sbjct: 104 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 163
Query: 306 VRFLLSAGAD 315
           V  LL  GAD
Sbjct: 164 VSLLLKCGAD 173

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 58.2 bits (139), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 55/172 (31%), Positives = 76/172 (44%), Gaps = 5/172 (2%)
Query: 140 KKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS 199
           K+LL          + G + L  A SA    + Q+LL   A   D  +    TPL+ AA 
Sbjct: 39  KRLLEASADAXIQDNMGRTPLHAAVSADAQGVFQILLRNRATDLDARMHDGTTPLILAAR 98
Query: 200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTP 259
                ++  LIN  ADVN     G + L +A A  +     VLL+ GAN +  N    TP
Sbjct: 99  LALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNKEETP 158
Query: 260 LMEAASAGHVGVAKILLEYGAG--INTHSNEFKESALTLACYKGHLDMVRFL 309
           L  AA  G    AK+LL++ A   I  H +        +A  + H D+VR L
Sbjct: 159 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD---IAQERMHHDIVRLL 207

>pdb|2QC9|A Chain A, Mouse Notch 1 Ankyrin Repeat Intracellular Domain Length = 210

Iteration: 1
 Score = 48.9 bits (115), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NVE 250
           T L  AA     +  + L+   AD   Q + G TPL  A +   + V ++LL   A +++
Sbjct: 24  TALHLAARYSRSDAAKRLLEASADAXIQDNMGRTPLHAAVSADAQGVFQILLRNRATDLD 83
Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
               +G TPL+ AA     G+ + L+   A +N   ++  +SAL  A    ++D    LL
Sbjct: 84  ARMHDGTTPLILAARLALEGMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLL 142
Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
             GA+++ + ++  T L  A+ +G  E AK+LLD  A
Sbjct: 143 KNGANKDMQNNKEETPLFLAAREGSYETAKVLLDHFA 179

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 58.2 bits (139), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 49/82 (59%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADVN +   G TPL  A   GH  +V VLL+ GA+V   +
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQD 65
Query: 254 ENGHTPLMEAASAGHVGVAKIL 275
           + G T    +   G+  +A+IL
Sbjct: 66  KFGKTAFDISIDNGNEDLAEIL 87

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 55.5 bits (132), Expect = 1e-07,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 45/68 (66%), Gaps = 3/68 (4%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +    TPL  AA+EGHLE+V  LL +GA V+A+ + G TA   + +NG
Sbjct: 20  ILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGADVNAQDKFGKTAFDISIDNG 79
Query: 574 HTDVADLL 581
           + D+A++L
Sbjct: 80  NEDLAEIL 87

>pdb|2XEN|A Chain A, Structural Determinants For Improved Thermal Stability Of Designed Ankyrin Repeat Proteins With A Redesigned C- Capping Module Length = 91

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 33/110 (30%), Positives = 54/110 (49%), Gaps = 28/110 (25%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNST 592
           L+EAA+ G  + VR L+ +GA V+AK + G T L  A   GH ++ ++LL  GA+     
Sbjct: 6   LLEAARAGQDDEVRILMANGADVNAKDKDGYTPLHLAAREGHLEIVEVLLKAGAD----- 60
Query: 593 MLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
                                  V+A+ + G TA   + +NG+ D+A++L
Sbjct: 61  -----------------------VNAQDKFGKTAFDISIDNGNEDLAEIL 87

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADV  +  +G+TPL  A   GH  VV++LLE GA+V   +
Sbjct: 10  LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQD 69
Query: 254 ENGHTPLMEAASAGHVGVAKIL 275
           + G T    +   G+  +A+IL
Sbjct: 70  KFGKTAFDISIDNGNEDLAEIL 91

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 29/68 (42%), Positives = 47/68 (69%), Gaps = 3/68 (4%)
Query: 517 FLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
            L+ NGA++   +   STPL  AA+ GHLE+V+ LL++GA V+A+ + G TA   + +NG
Sbjct: 24  ILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVNAQDKFGKTAFDISIDNG 83
Query: 574 HTDVADLL 581
           + D+A++L
Sbjct: 84  NEDLAEIL 91

>pdb|2ZGG|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 92

Iteration: 1
 Score = 53.1 bits (126), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 53/110 (48%), Gaps = 28/110 (25%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNST 592
           L+EAA+ G  + VR L+ +GA V AK + G T L  A  NGH +V  LLL  GA+     
Sbjct: 10  LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD----- 64
Query: 593 MLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
                                  V+A+ + G TA   + +NG+ D+A++L
Sbjct: 65  -----------------------VNAQDKFGKTAFDISIDNGNEDLAEIL 91

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 54/172 (31%), Positives = 77/172 (44%), Gaps = 5/172 (2%)
Query: 140 KKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS 199
           K+LL      +   + G + L  A SA    + Q+L+   A   D  +    TPL+ AA 
Sbjct: 42  KRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAAR 101
Query: 200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTP 259
                ++  LIN  ADVN     G + L +A A  +     VLL+ GAN +  N    TP
Sbjct: 102 LAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETP 161
Query: 260 LMEAASAGHVGVAKILLEYGAG--INTHSNEFKESALTLACYKGHLDMVRFL 309
           L  AA  G    AK+LL++ A   I  H +        +A  + H D+VR L
Sbjct: 162 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD---IAQERMHHDIVRLL 210

>pdb|2F8Y|A Chain A, Crystal Structure Of Human Notch1 Ankyrin Repeats To 1.55a Resolution. Length = 223

Iteration: 1
 Score = 50.4 bits (119), Expect = 3e-06,   Method: Compositional matrix adjust.
 Identities = 47/157 (29%), Positives = 78/157 (49%), Gaps = 2/157 (1%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NVE 250
           T L  AA     +  + L+   AD N Q + G TPL  A +   + V ++L+   A +++
Sbjct: 27  TALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLD 86
Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
               +G TPL+ AA     G+ + L+   A +N   ++  +SAL  A    ++D    LL
Sbjct: 87  ARMHDGTTPLILAARLAVEGMLEDLINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLL 145
Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
             GA+++ + +   T L  A+ +G  E AK+LLD  A
Sbjct: 146 KNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFA 182

>pdb|1OT8|A Chain A, Structure Of The Ankyrin Domain Of The Drosophila Notch Receptor Length = 239

Iteration: 1
 Score = 57.8 bits (138), Expect = 2e-08,   Method: Compositional matrix adjust.
 Identities = 51/170 (30%), Positives = 75/170 (44%), Gaps = 5/170 (2%)
Query: 142 LLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 201
           LL  G   +   + G + L  A +A    + Q+LL   A   +  +    TPL+ AA   
Sbjct: 70  LLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLA 129
Query: 202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLM 261
              +V  LI   AD+N   +SG T L +A A  +   V +LL   AN +  ++   TPL 
Sbjct: 130 IEGMVEDLITADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLF 189
Query: 262 EAASAGHVGVAKILLEYGAG--INTHSNEFKESALTLACYKGHLDMVRFL 309
            AA  G    +K LL+  A   I  H +        +A  + H D+VR L
Sbjct: 190 LAAREGSYEASKALLDNFANREITDHMDRLPRD---VASERLHHDIVRLL 236

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 57.4 bits (137), Expect = 3e-08,   Method: Compositional matrix adjust.
 Identities = 44/130 (33%), Positives = 65/130 (50%), Gaps = 11/130 (8%)
Query: 193 PLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDH 252
           PL EAA  G +  +R  +++   VNG   +G+T L +AC GGH+ +V  L     N+E +
Sbjct: 76  PLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLF-TQPNIELN 134
Query: 253 NEN--GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFK---ESALTLAC-----YKGH 302
            +N  G T L  AA  G+  + ++LL  GA  +  + E K   + A   AC      K  
Sbjct: 135 QQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDXATNAACASLLKKKQG 194
Query: 303 LDMVRFLLSA 312
            D VR L +A
Sbjct: 195 TDAVRTLSNA 204

>pdb|3EHQ|A Chain A, Crystal Structure Of Human Osteoclast Stimulating Factor Length = 222

Iteration: 1
 Score = 54.7 bits (130), Expect = 2e-07,   Method: Compositional matrix adjust.
 Identities = 36/119 (30%), Positives = 54/119 (45%), Gaps = 27/119 (22%)
Query: 532 PLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS 591
           PL EAA+ G+L  +R  LD+   V+   + G TAL +AC  GH D+ + L +        
Sbjct: 76  PLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEXLFT-------- 127
Query: 592 TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
                       N+          ++ + + GDTAL  A   G+ D+  LLL+ GA  D
Sbjct: 128 ----------QPNI---------ELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTD 167

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 57.0 bits (136), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 33/82 (40%), Positives = 51/82 (62%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L+EAA +G  + VR+L+ +GADV  +  +G+TPL  A   GH  VV++LLE GA+V   +
Sbjct: 28  LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQD 87
Query: 254 ENGHTPLMEAASAGHVGVAKIL 275
           + G T    +   G+  +A+IL
Sbjct: 88  KFGKTAFDISIDNGNEDLAEIL 109

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 56.2 bits (134), Expect = 6e-08,   Method: Compositional matrix adjust.
 Identities = 30/72 (41%), Positives = 47/72 (65%), Gaps = 3/72 (4%)
Query: 513 DVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYA 569
           D    L+ NGA++   +   STPL  AA+ GHLE+V+ LL++GA V A+ + G TA   +
Sbjct: 38  DEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDIS 97
Query: 570 CENGHTDVADLL 581
            +NG+ D+A++L
Sbjct: 98  IDNGNEDLAEIL 109

>pdb|2ZGD|A Chain A, Asn-Hydroxylation Stabilises The Ankyrin Repeat Domain Fold Length = 110

Iteration: 1
 Score = 52.8 bits (125), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 36/110 (32%), Positives = 52/110 (47%), Gaps = 28/110 (25%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNST 592
           L+EAA+ G  + VR L+ +GA V AK + G T L  A  NGH +V  LLL  GA+     
Sbjct: 28  LLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD----- 82
Query: 593 MLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
                                  V A+ + G TA   + +NG+ D+A++L
Sbjct: 83  -----------------------VXAQDKFGKTAFDISIDNGNEDLAEIL 109

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 56/220 (25%), Positives = 100/220 (45%), Gaps = 32/220 (14%)
Query: 154 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG 213
           D+G   L+ ACS+G  E    LL   A++    + G  T L +A     +++V+ L+ +G
Sbjct: 39  DDGAVFLA-ACSSGDTEEVLRLLERGADINYANVDG-LTALHQACIDDNVDMVKFLVENG 96
Query: 214 ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPL------------- 260
           A++N   + G  PL  A + G+  +   L+  GA+V   N  G TPL             
Sbjct: 97  ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQ 156
Query: 261 ---------MEAASAGHVGVAKILLEYGAGINT-HSNEFKE-----SALTLACYKGHLDM 305
                    +EAA      +  +L +    +N+ H N+ +      +AL +A  KG+ ++
Sbjct: 157 NEVNRQGVDIEAARKEEERI--MLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEV 214
Query: 306 VRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS 345
           ++ L+ A  D   K  +  T L  A+  G  E  ++L+++
Sbjct: 215 LKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVEN 254

>pdb|1S70|B Chain B, Complex Between Protein Ser/thr Phosphatase-1 (delta) And The Myosin Phosphatase Targeting Subunit 1 (mypt1) Length = 299

Iteration: 1
 Score = 49.7 bits (117), Expect = 7e-06,   Method: Compositional matrix adjust.
 Identities = 54/184 (29%), Positives = 79/184 (42%), Gaps = 29/184 (15%)
Query: 507 CCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD 563
           C    +D+  FL++NGANI    +    PL  AA  G+L++  YL+  GA V A    GD
Sbjct: 81  CIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGD 140
Query: 564 TALTY-------ACENGHTDVADLLLSYGANLDNSTMLIEAAKG---GHANVVQLLLDFP 613
           T L                +   + +      +   ML +A +    GH N V+      
Sbjct: 141 TPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVR------ 194
Query: 614 RSVHAKTQTGDTALTYACENGHTDVADLLLS--YGANL---DNSTMLIEAAKGGHANVVQ 668
              HAK  +G TAL  A   G+T+V  LL+   Y  N+   D  T L  AA  G     +
Sbjct: 195 ---HAK--SGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACR 249
Query: 669 LLLD 672
           +L++
Sbjct: 250 ILVE 253

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 56.2 bits (134), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 111 LTRMRNEN----PRPQNERSLVQACSDGDVKTVKKLLTE--GRSVHETTDEGESLLSLAC 164
           L++M N N    P          ACS G+++ VK L        +++ T++G + L LA 
Sbjct: 56  LSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAV 115
Query: 165 SAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG-ADVNGQSSSG 223
              ++E++Q L+   A+V  +  K    PL  AAS G ++++ LL   G + VN Q   G
Sbjct: 116 GKKWFEVSQFLIENGASVRIKD-KFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG 174
Query: 224 NTPLMYACAGGHEAVVRVLLE 244
            TPL +A A GH     +L+E
Sbjct: 175 WTPLFHALAEGHGDAAVLLVE 195

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 47.8 bits (112), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 5/189 (2%)
Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANV--E 183
           L QAC + +   V++LL    S+    D+ G   L  + S   +E+   LL+   NV  +
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 65
Query: 184 DRGIKGECTPLMEAASSGFIEIVRLLINH--GADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           D       TP   A S G +E+V+ L +     D+N  ++ G T L  A       V + 
Sbjct: 66  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 125
Query: 242 LLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKG 301
           L+E GA+V   ++    PL  AAS G + + ++L   G       ++   + L  A  +G
Sbjct: 126 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185
Query: 302 HLDMVRFLL 310
           H D    L+
Sbjct: 186 HGDAAVLLV 194

>pdb|2DZN|A Chain A, Crystal Structure Analysis Of Yeast Nas6p Complexed With The Proteasome Subunit, Rpt3 Length = 228

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANV--E 434
           L QAC + +   V++LL    S+    D+ G   L  + S   +E+   LL+   NV  +
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 65
Query: 435 DRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAH 494
           D       TP   A S G   NL    S Y R      +K  N     + L  G K    
Sbjct: 66  DYPDDSGWTPFHIACSVG---NLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKK---- 118
Query: 495 XXXXXXXXXXXXCCGGFLDVADFLLKNGANIELG---ASTPLMEAAQEGHLELVRYLLDS 551
                           + +V+ FL++NGA++ +       PL  AA  G L+L+  L   
Sbjct: 119 ----------------WFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 162
Query: 552 G-AQVHAKTQTGDTALTYACENGHTDVADLLLS-YGANLD 589
           G + V+ + + G T L +A   GH D A LL+  YGA  D
Sbjct: 163 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 55.8 bits (133), Expect = 7e-08,   Method: Composition-based stats.
 Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 8/141 (5%)
Query: 111 LTRMRNEN----PRPQNERSLVQACSDGDVKTVKKLLTE--GRSVHETTDEGESLLSLAC 164
           L++M N N    P          ACS G+++ VK L        +++ T++G + L LA 
Sbjct: 56  LSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAV 115
Query: 165 SAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG-ADVNGQSSSG 223
              ++E++Q L+   A+V  +  K    PL  AAS G ++++ LL   G + VN Q   G
Sbjct: 116 GKKWFEVSQFLIENGASVRIKD-KFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQG 174
Query: 224 NTPLMYACAGGHEAVVRVLLE 244
            TPL +A A GH     +L+E
Sbjct: 175 WTPLFHALAEGHGDAAVLLVE 195

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 5/189 (2%)
Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANV--E 183
           L QAC + +   V++LL    S+    D+ G   L  + S   +E+   LL+   NV  +
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 65
Query: 184 DRGIKGECTPLMEAASSGFIEIVRLLINH--GADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           D       TP   A S G +E+V+ L +     D+N  ++ G T L  A       V + 
Sbjct: 66  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 125
Query: 242 LLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKG 301
           L+E GA+V   ++    PL  AAS G + + ++L   G       ++   + L  A  +G
Sbjct: 126 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185
Query: 302 HLDMVRFLL 310
           H D    L+
Sbjct: 186 HGDAAVLLV 194

>pdb|1IXV|A Chain A, Crystal Structure Analysis Of Homolog Of Oncoprotein Gankyrin, An Interactor Of Rb And Cdk46 Length = 231

Iteration: 1
 Score = 45.8 bits (107), Expect = 9e-05,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANV--E 434
           L QAC + +   V++LL    S+    D+ G   L  + S   +E+   LL+   NV  +
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 65
Query: 435 DRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAH 494
           D       TP   A S G   NL    S Y R      +K  N     + L  G K    
Sbjct: 66  DYPDDSGWTPFHIACSVG---NLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKK---- 118
Query: 495 XXXXXXXXXXXXCCGGFLDVADFLLKNGANIELG---ASTPLMEAAQEGHLELVRYLLDS 551
                           + +V+ FL++NGA++ +       PL  AA  G L+L+  L   
Sbjct: 119 ----------------WFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 162
Query: 552 G-AQVHAKTQTGDTALTYACENGHTDVADLLLS-YGANLD 589
           G + V+ + + G T L +A   GH D A LL+  YGA  D
Sbjct: 163 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202

>pdb|1BLX|B Chain B, P19ink4dCDK6 COMPLEX Length = 166

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 10/150 (6%)
Query: 130 ACSDGDVKTVKKLLTEGRSVHE--TTDEGESLLSLACSAGYYELAQVLLAMHA--NVEDR 185
           A + GDV+ V++LL     VH       G++ L +    G   +A  LL   A  NV+D 
Sbjct: 15  AAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQVMMF-GSPAVALELLKQGASPNVQD- 71
Query: 186 GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245
                 +P+ +AA +GF++ +++L+ HGADVN   S+G+ P+  A   GH +VV   L  
Sbjct: 72  --ASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVS-FLAP 128
Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKIL 275
            +++   + +G TPL  A   G   +  IL
Sbjct: 129 ESDLHHRDASGLTPLELARQRGAQNLMDIL 158

>pdb|1BD8|A Chain A, Structure Of Cdk Inhibitor P19ink4d Length = 156

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA------GYYELAQVLLAMHA--N 181
           A + GDV+ V++LL      H      ++L     +A      G   +A  LL   A  N
Sbjct: 9   AAARGDVQEVRRLL------HRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPN 62
Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           V+D       +P+ +AA +GF++ +++L+ HGADVN    +G  P+  A   GH AVV  
Sbjct: 63  VQD---TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS- 118
Query: 242 LLECGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
            L   +++   +  G TPL  A   G   +  IL
Sbjct: 119 FLAAESDLHRRDARGLTPLELALQRGAQDLVDIL 152

>pdb|1AP7|A Chain A, P19-Ink4d From Mouse, Nmr, 20 Structures Length = 168

Iteration: 1
 Score = 53.9 bits (128), Expect = 3e-07,   Method: Compositional matrix adjust.
 Identities = 48/150 (32%), Positives = 77/150 (51%), Gaps = 10/150 (6%)
Query: 130 ACSDGDVKTVKKLLTEGRSVHE--TTDEGESLLSLACSAGYYELAQVLLAMHA--NVEDR 185
           A + GDV+ V++LL     VH       G++ L +    G   +A  LL   A  NV+D 
Sbjct: 17  AAARGDVQEVRRLLHR-ELVHPDALNRFGKTALQVMM-FGSPAVALELLKQGASPNVQD- 73
Query: 186 GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245
                 +P+ +AA +GF++ +++L+ HGADVN   S+G+ P+  A   GH +VV   L  
Sbjct: 74  --ASGTSPVHDAARTGFLDTLKVLVEHGADVNALDSTGSLPIHLAIREGHSSVVS-FLAP 130
Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKIL 275
            +++   + +G TPL  A   G   +  IL
Sbjct: 131 ESDLHHRDASGLTPLELARQRGAQNLMDIL 160

>pdb|1BI8|B Chain B, Mechanism Of G1 Cyclin Dependent Kinase Inhibition From The Structures Cdk6-P19ink4d Inhibitor Complex Length = 166

Iteration: 1
 Score = 53.5 bits (127), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 47/154 (30%), Positives = 73/154 (47%), Gaps = 18/154 (11%)
Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA------GYYELAQVLLAMHA--N 181
           A + GDV+ V++LL      H      ++L     +A      G   +A  LL   A  N
Sbjct: 15  AAARGDVQEVRRLL------HRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPN 68
Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           V+D       +P+ +AA +GF++ +++L+ HGADVN    +G  P+  A   GH AVV  
Sbjct: 69  VQD---TSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVS- 124
Query: 242 LLECGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
            L   +++   +  G TPL  A   G   +  IL
Sbjct: 125 FLAAESDLHRRDARGLTPLELALQRGAQDLVDIL 158

>pdb|1YCS|B Chain B, P53-53bp2 Complex Length = 239

Iteration: 1
 Score = 52.0 bits (123), Expect = 1e-06,   Method: Composition-based stats.
 Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L++++  G  ++V+ +I    D +  +  G T L  A   GH  +V+ L++ G NV   +
Sbjct: 41  LLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD 100
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGI 282
            +G TPL  AAS  +V V K L+E GA +
Sbjct: 101 SDGWTPLHCAASCNNVQVCKFLVESGAAV 129

>pdb|1YMP|A Chain A, The Crystal Structure Of A Partial Mouse Notch-1 Ankyrin Domain: Repeats 4 Through 7 Preserve An Ankyrin Fold Length = 135

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 42/121 (34%), Positives = 57/121 (47%), Gaps = 5/121 (4%)
Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
            TPL+ AA      ++  LIN  ADVN     G + L +A A  +     VLL+ GAN +
Sbjct: 16  TTPLILAARLALEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD 75
Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAG--INTHSNEFKESALTLACYKGHLDMVRF 308
             N    TPL  AA  G    AK+LL++ A   I  H +        +A  + H D+VR 
Sbjct: 76  MQNNKEETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRD---IAQERMHHDIVRL 132
Query: 309 L 309
           L
Sbjct: 133 L 133

>pdb|4A63|B Chain B, Crystal Structure Of The P73-Aspp2 Complex At 2.6a Resolution Length = 239

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/89 (33%), Positives = 49/89 (55%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L++++  G  ++V+ +I    D +  +  G T L  A   GH  +V+ L++ G NV   +
Sbjct: 41  LLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD 100
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGI 282
            +G TPL  AAS  +V V K L+E GA +
Sbjct: 101 SDGWTPLHCAASCNNVQVCKFLVESGAAV 129

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 51.6 bits (122), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
            M A  +G ++ V+  +  G DVN     G  PL YA   G   ++  LL  GA++   +
Sbjct: 6   FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 65
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGA 280
           ++  TPL+ A   GHV   K+LL  GA
Sbjct: 66  KHHITPLLSAVYEGHVSCVKLLLSKGA 92

>pdb|1MYO|A Chain A, Solution Structure Of Myotrophin, Nmr, 44 Structures Length = 118

Iteration: 1
 Score = 48.1 bits (113), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 1/101 (0%)
Query: 227 LMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHS 286
            M+A   G    V+  +  G +V    E G  PL  AA  G + + + LL  GA IN   
Sbjct: 6   FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-P 64
Query: 287 NEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTAL 327
           ++   + L  A Y+GH+  V+ LLS GAD+  K  +  TAL
Sbjct: 65  DKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAL 105

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 51.2 bits (121), Expect = 2e-06,   Method: Compositional matrix adjust.
 Identities = 30/87 (34%), Positives = 44/87 (50%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
            M A  +G ++ V+  +  G DVN     G  PL YA   G   ++  LL  GA++   +
Sbjct: 11  FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 70
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGA 280
           ++  TPL+ A   GHV   K+LL  GA
Sbjct: 71  KHHITPLLSAVYEGHVSCVKLLLSKGA 97

>pdb|3AAA|C Chain C, Crystal Structure Of Actin Capping Protein In Complex With V-1 Length = 123

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 34/101 (33%), Positives = 49/101 (48%), Gaps = 1/101 (0%)
Query: 227 LMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHS 286
            M+A   G    V+  +  G +V    E G  PL  AA  G + + + LL  GA IN   
Sbjct: 11  FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA-P 69
Query: 287 NEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTAL 327
           ++   + L  A Y+GH+  V+ LLS GAD+  K  +  TA 
Sbjct: 70  DKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAF 110

>pdb|2RFA|A Chain A, Crystal Structure Of The Mouse Trpv6 Ankyrin Repeat Domain Length = 232

Iteration: 1
 Score = 48.5 bits (114), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 55/215 (25%), Positives = 92/215 (42%), Gaps = 27/215 (12%)
Query: 124 ERSLVQACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV 182
           E  L+ A  + DV+ + KLL  EG  VH+    GE+ L +A      E A VL+     +
Sbjct: 4   ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPEL 63
Query: 183 EDRGIKGEC----TPLMEAASSGFIEIVRLLINHGADVNGQSSS-------------GNT 225
               +  E     T L  A  +  + +VR L+  GA V+ +++              G  
Sbjct: 64  VFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEH 123
Query: 226 PLMYACAGGHEAVVRVLLECGANVEDHNENG----HTPLMEAASAGHVGVAKILLEYGAG 281
           PL +A   G E +VR+L+E GA++   +  G    H  +++        +  +LL Y  G
Sbjct: 124 PLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGG 183
Query: 282 INTHSNEFKE-----SALTLACYKGHLDMVRFLLS 311
            +  S E        +   LA  +G++ M + L+ 
Sbjct: 184 DHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQ 218

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 47.8 bits (112), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 35/120 (29%), Positives = 59/120 (49%)
Query: 195 MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNE 254
           ++    G  EI R L+  GA+ + +  +GN  +  A   G    ++ LLE  A+V   + 
Sbjct: 42  LQVMKLGNPEIARRLLLRGANPDLKDRTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDN 101
Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
            G+ PL  AA  GH+ V + L+++ A    H N   ++A  LA   G  ++V  + + GA
Sbjct: 102 EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|1MX2|A Chain A, Structure Of F71n Mutant Of P18ink4c Length = 168

Iteration: 1
 Score = 42.4 bits (98), Expect = 9e-04,   Method: Compositional matrix adjust.
 Identities = 38/120 (31%), Positives = 61/120 (50%), Gaps = 6/120 (5%)
Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD--- 589
           L  AA  G LE +  LL +   V+A+   G TAL    + G+ ++A  LL  GAN D   
Sbjct: 9   LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQ-VMKLGNPEIARRLLLRGANPDLKD 67
Query: 590 --NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA 647
              + ++ +AA+ G  + +Q LL+F   V+ +   G+  L  A + GH  V + L+ + A
Sbjct: 68  RTGNAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA 127

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Composition-based stats.
 Identities = 52/189 (27%), Positives = 84/189 (44%), Gaps = 5/189 (2%)
Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANV--E 183
           L QAC + +   V++LL    S+    D+ G   L  + S   +E+   LL+   NV  +
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 65
Query: 184 DRGIKGECTPLMEAASSGFIEIVRLLINH--GADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           D       TP   A S G +E+V+ L +     D+N  ++ G T L  A       V + 
Sbjct: 66  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 125
Query: 242 LLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKG 301
           L+E GA+V   ++    PL  AAS G + + ++L   G       ++   + L  A  +G
Sbjct: 126 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 185
Query: 302 HLDMVRFLL 310
           H D    L+
Sbjct: 186 HGDAAVLLV 194

>pdb|1WG0|A Chain A, Structural Comparison Of Nas6p Protein Structures In Two Different Crystal Forms Length = 243

Iteration: 1
 Score = 45.4 bits (106), Expect = 1e-04,   Method: Composition-based stats.
 Identities = 63/220 (28%), Positives = 92/220 (41%), Gaps = 31/220 (14%)
Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANV--E 434
           L QAC + +   V++LL    S+    D+ G   L  + S   +E+   LL+   NV  +
Sbjct: 6   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 65
Query: 435 DRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAH 494
           D       TP   A S G   NL    S Y R      +K  N     + L  G K    
Sbjct: 66  DYPDDSGWTPFHIACSVG---NLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKK---- 118
Query: 495 XXXXXXXXXXXXCCGGFLDVADFLLKNGANIELG---ASTPLMEAAQEGHLELVRYLLDS 551
                           + +V+ FL++NGA++ +       PL  AA  G L+L+  L   
Sbjct: 119 ----------------WFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 162
Query: 552 G-AQVHAKTQTGDTALTYACENGHTDVADLLLS-YGANLD 589
           G + V+ + + G T L +A   GH D A LL+  YGA  D
Sbjct: 163 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYD 202

>pdb|2VGE|A Chain A, Crystal Structure Of The C-Terminal Region Of Human Iaspp Length = 229

Iteration: 1
 Score = 47.4 bits (111), Expect = 3e-05,   Method: Compositional matrix adjust.
 Identities = 29/89 (32%), Positives = 48/89 (53%)
Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN 253
           L++AA +G +E+V+  +    D +  +  G T L  A  G + ++V  L+  GANV   +
Sbjct: 25  LLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPD 84
Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGI 282
            +G TPL  AAS     +   L+++GA I
Sbjct: 85  SHGWTPLHCAASCNDTVICMALVQHGAAI 113

>pdb|1MX4|A Chain A, Structure Of P18ink4c (F82q) Length = 168

Iteration: 1
 Score = 45.1 bits (105), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 195 MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNE 254
           ++    G  EI R L+  GA+ + +  +G   +  A   G    ++ LLE  A+V   + 
Sbjct: 42  LQVMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGQLDTLQTLLEFQADVNIEDN 101
Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
            G+ PL  AA  GH+ V + L+++ A    H N   ++A  LA   G  ++V  + + GA
Sbjct: 102 EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|1IHB|A Chain A, Crystal Structure Of P18-Ink4c(Ink6) Length = 162

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 195 MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNE 254
           ++    G  EI R L+  GA+ + +  +G   +  A   G    ++ LLE  A+V   + 
Sbjct: 42  LQVMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDN 101
Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
            G+ PL  AA  GH+ V + L+++ A    H N   ++A  LA   G  ++V  + + GA
Sbjct: 102 EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|2FO1|E Chain E, Crystal Structure Of The Csl-Notch-Mastermind Ternary Complex Bound To Dna Length = 373

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 22/51 (43%), Positives = 29/51 (56%)
Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLL 581
           TP+  AAQEG +E+V YL+  GA V A   T  TA   A  N H ++ D+ 
Sbjct: 315 TPIXLAAQEGRIEVVXYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIF 365

>pdb|1BU9|A Chain A, Solution Structure Of P18-Ink4c, 21 Structures Length = 168

Iteration: 1
 Score = 44.3 bits (103), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 195 MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNE 254
           ++    G  EI R L+  GA+ + +  +G   +  A   G    ++ LLE  A+V   + 
Sbjct: 42  LQVMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDN 101
Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
            G+ PL  AA  GH+ V + L+++ A    H N   ++A  LA   G  ++V  + + GA
Sbjct: 102 EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|3T9K|A Chain A, Crystal Structure Of Acap1 C-portion Mutant S554d Fused With Integrin Beta1 Peptide Length = 390

Iteration: 1
 Score = 44.3 bits (103), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           TPL++A ++  +     L+ +GA+VN   S+G  PL +A   GH  +  + L+ GA++  
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 252 HNENGHTPL---MEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVR- 307
            +  G  PL   ME A+A  V + ++     A          E+A   A  + +LD+ R 
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLLRLAKMREA----------EAAQGQAGDETYLDIFRD 346
Query: 308 FLLSAGADQE---HKTDEMHT 325
           F L A  D E    ++ ++HT
Sbjct: 347 FSLMASDDPEKLSRRSHDLHT 367

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 34/120 (28%), Positives = 58/120 (48%)
Query: 195 MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNE 254
           ++    G  EI R L+  GA+ + +  +G   +  A   G    ++ LLE  A+V   + 
Sbjct: 42  LQVMKLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLENQADVNIEDN 101
Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
            G+ PL  AA  GH+ V + L+++ A    H N   ++A  LA   G  ++V  + + GA
Sbjct: 102 EGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>pdb|1MX6|A Chain A, Structure Of P18ink4c (F92n) Length = 168

Iteration: 1
 Score = 43.1 bits (100), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 4/81 (4%)
Query: 510 GFLDVADFLLKNGANIELG---ASTPLMEAAQEGHLELVRYLLD-SGAQVHAKTQTGDTA 565
           GFLD    LL+N A++ +     + PL  AA+EGHL +V +L+  + + V  +   GDTA
Sbjct: 81  GFLDTLQTLLENQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTA 140
Query: 566 LTYACENGHTDVADLLLSYGA 586
              A   G  +V  L+ + GA
Sbjct: 141 CDLARLYGRNEVVSLMQANGA 161

>pdb|3JUE|A Chain A, Crystal Structure Of Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           TPL++A ++  +     L+ +GA+VN   S+G  PL +A   GH  +  + L+ GA++  
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 252 HNENGHTPL---MEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVR- 307
            +  G  PL   ME A+A  V + ++     A          E+A   A  + +LD+ R 
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLLRLAKMREA----------EAAQGQAGDETYLDIFRD 346
Query: 308 FLLSAGADQE---HKTDEMHT 325
           F L A  D E    ++ ++HT
Sbjct: 347 FSLMASDDPEKLSRRSHDLHT 367

>pdb|4F1P|A Chain A, Crystal Structure Of Mutant S554d For Arfgap And Ank Repeat Domain Of Acap1 Length = 368

Iteration: 1
 Score = 43.9 bits (102), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 41/141 (29%), Positives = 69/141 (48%), Gaps = 17/141 (12%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           TPL++A ++  +     L+ +GA+VN   S+G  PL +A   GH  +  + L+ GA++  
Sbjct: 237 TPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGA 296
Query: 252 HNENGHTPL---MEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVR- 307
            +  G  PL   ME A+A  V + ++     A          E+A   A  + +LD+ R 
Sbjct: 297 RDSEGRDPLTIAMETANADIVTLLRLAKMREA----------EAAQGQAGDETYLDIFRD 346
Query: 308 FLLSAGADQE---HKTDEMHT 325
           F L A  D E    ++ ++HT
Sbjct: 347 FSLMASDDPEKLSRRSHDLHT 367

>pdb|1OY3|D Chain D, Crystal Structure Of An IkbbetaNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVN-GQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
           TPL  A      E+VRLL + GAD+N  + + G TPL  A      +V+ +LL+ GA+  
Sbjct: 160 TPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT 219
Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGA 280
                G TPL  A    +  +A++L  +GA
Sbjct: 220 ARMYGGRTPLGSALLRPNPILARLLRAHGA 249

>pdb|1K3Z|D Chain D, X-Ray Crystal Structure Of The IkbbNF-Kb P65 Homodimer Complex Length = 282

Iteration: 1
 Score = 43.5 bits (101), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 32/90 (35%), Positives = 47/90 (52%), Gaps = 1/90 (1%)
Query: 192 TPLMEAASSGFIEIVRLLINHGADVN-GQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
           TPL  A      E+VRLL + GAD+N  + + G TPL  A      +V+ +LL+ GA+  
Sbjct: 160 TPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPT 219
Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGA 280
                G TPL  A    +  +A++L  +GA
Sbjct: 220 ARMYGGRTPLGSALLRPNPILARLLRAHGA 249

>pdb|1DCQ|A Chain A, Crystal Structure Of The Arf-Gap Domain And Ankyrin Repeats Of Papbeta Length = 278

Iteration: 1
 Score = 42.7 bits (99), Expect = 8e-04,   Method: Compositional matrix adjust.
 Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 1/84 (1%)
Query: 203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLME 262
           + IV  L+ +  +++ Q+  G+T L Y C   +   +++LL   A++E  NE+G TPL  
Sbjct: 185 LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDI 244
Query: 263 AASAGHVGVAKILLEYGAG-INTH 285
           A    H    ++L +  +G  N+H
Sbjct: 245 AKRLKHEHCEELLTQALSGRFNSH 268

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	739
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-119
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-116
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-115
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-104
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	9e-88
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	9e-85
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	4e-75
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-62
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	1e-53
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-77
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	4e-75
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	7e-69
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	3e-61
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	2e-59
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	5e-58
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	8e-50
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	6e-48
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	8e-11
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-71
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	5e-62
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-59
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	4e-56
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	1e-55
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	2e-41
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	4e-21
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-71
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-70
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	4e-62
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	2e-59
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	3e-57
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	7e-46
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	6e-30
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-70
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-62
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-62
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-58
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-57
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-57
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	1e-54
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	7e-54
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-52
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-51
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	5e-33
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	4e-21
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	2e-10
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-68
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	7e-61
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-59
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-58
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	5e-57
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-54
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	1e-43
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	3e-40
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	2e-32
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-65
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-56
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	9e-56
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	4e-52
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-50
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-47
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-47
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	1e-35
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	2e-16
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-62
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-61
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	1e-56
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-52
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	2e-51
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	4e-49
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	9e-15
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	3e-59
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-58
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-56
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-56
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-48
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-48
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	4e-45
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	6e-42
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	8e-41
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	2e-38
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	5e-20
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	6e-59
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	2e-57
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	7e-56
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-50
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	4e-48
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-47
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	1e-44
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	6e-32
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	3e-05
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	5e-57
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-51
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	4e-48
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-47
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-45
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	6e-43
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	1e-36
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-29
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	3e-25
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-14
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	2e-04
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-56
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	6e-55
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	8e-55
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-54
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	1e-52
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	3e-52
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-52
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-50
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	5e-46
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	9e-42
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	8e-26
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-56
3v30_A	172	DNA-binding protein rfxank; structural genomics co	8e-52
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-47
3v30_A	172	DNA-binding protein rfxank; structural genomics co	2e-46
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-44
3v30_A	172	DNA-binding protein rfxank; structural genomics co	8e-43
3v30_A	172	DNA-binding protein rfxank; structural genomics co	9e-37
3v30_A	172	DNA-binding protein rfxank; structural genomics co	5e-35
3v30_A	172	DNA-binding protein rfxank; structural genomics co	4e-29
3v30_A	172	DNA-binding protein rfxank; structural genomics co	1e-16
3v30_A	172	DNA-binding protein rfxank; structural genomics co	3e-04
3hra_A	201	Ankyrin repeat family protein; structural protein;	9e-56
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-49
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-46
3hra_A	201	Ankyrin repeat family protein; structural protein;	9e-40
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-39
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-32
3hra_A	201	Ankyrin repeat family protein; structural protein;	2e-29
3hra_A	201	Ankyrin repeat family protein; structural protein;	1e-27
3hra_A	201	Ankyrin repeat family protein; structural protein;	4e-26
3hra_A	201	Ankyrin repeat family protein; structural protein;	3e-10
3hra_A	201	Ankyrin repeat family protein; structural protein;	5e-04
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	9e-55
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-53
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-50
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	6e-47
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	5e-46
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-45
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	1e-42
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	7e-41
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-33
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	2e-22
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-54
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-53
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	7e-53
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-50
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-49
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-48
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-46
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	1e-45
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	2e-20
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	4e-06
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-54
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	1e-52
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	8e-51
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-49
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	4e-47
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	9e-44
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	3e-42
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-38
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	6e-17
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	5e-54
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-52
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-51
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-45
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-44
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	7e-43
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	2e-37
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	3e-37
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	6e-17
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-52
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-43
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	1e-42
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-41
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	8e-39
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-36
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	5e-33
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	2e-29
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	7e-17
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	8e-10
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-52
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-45
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	7e-43
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-42
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	5e-42
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-37
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-35
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	2e-32
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	3e-27
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	1e-24
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	4e-14
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	6e-14
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	7e-51
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	5e-46
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-43
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	9e-42
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-37
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-35
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-28
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	4e-23
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-22
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	2e-06
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	8e-05
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	1e-04
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-50
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	3e-44
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	6e-43
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	1e-42
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-40
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	8e-37
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-29
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	4e-29
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	2e-10
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	8e-06
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	8e-50
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-47
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-47
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-44
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-41
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	4e-36
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	2e-31
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	5e-28
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	6e-28
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-49
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	5e-42
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-41
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	4e-38
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	1e-33
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-33
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	9e-32
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	7e-28
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	3e-18
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	2e-07
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-48
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-46
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-46
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	2e-43
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	4e-43
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	1e-42
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-36
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	5e-32
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	8e-27
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	3e-18
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	2e-48
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	6e-46
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	7e-44
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-43
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	9e-43
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	4e-35
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-33
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-29
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-28
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	1e-23
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	3e-10
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-48
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-43
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	3e-40
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	1e-39
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	7e-37
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-29
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	5e-25
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	5e-23
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	4e-16
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	8e-13
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	2e-04
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-47
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-44
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	2e-42
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	5e-37
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-34
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	4e-34
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-25
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	4e-19
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	1e-18
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	3e-18
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	6e-09
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-46
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-39
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-38
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-33
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-32
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-22
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-20
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	3e-16
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-15
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	1e-11
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	5e-06
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	2e-05
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	4e-05
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-45
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-38
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-38
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	6e-33
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-32
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-32
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-32
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-26
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	4e-18
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-14
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	1e-08
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	2e-05
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	8e-04
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-44
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	3e-41
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	7e-39
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-38
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-35
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	9e-34
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	1e-23
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	5e-20
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-17
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	2e-06
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	6e-04
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	7e-44
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-41
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	4e-38
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	5e-37
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-32
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	9e-27
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	2e-23
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	8e-19
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	3e-05
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	7e-44
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-42
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	9e-38
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-36
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	3e-29
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	8e-29
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-20
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	6e-14
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	6e-09
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	1e-06
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	2e-04
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	2e-43
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-40
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	3e-33
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	7e-33
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	6e-25
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	8e-17
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-43
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	4e-41
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	5e-41
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-37
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-34
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	6e-31
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-11
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	7e-07
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	2e-04
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	3e-04
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-42
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-41
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-38
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	7e-29
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-27
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-26
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-24
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	4e-21
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	2e-18
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	5e-11
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	6e-06
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	1e-05
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-42
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	1e-41
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	3e-39
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	9e-32
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	6e-31
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	7e-29
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-28
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	8e-26
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	4e-25
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	5e-20
2rfa_A	232	Transient receptor potential cation channel subfa	3e-40
2rfa_A	232	Transient receptor potential cation channel subfa	8e-40
2rfa_A	232	Transient receptor potential cation channel subfa	1e-37
2rfa_A	232	Transient receptor potential cation channel subfa	3e-32
2rfa_A	232	Transient receptor potential cation channel subfa	3e-29
2rfa_A	232	Transient receptor potential cation channel subfa	9e-27
2rfa_A	232	Transient receptor potential cation channel subfa	9e-27
2rfa_A	232	Transient receptor potential cation channel subfa	2e-20
2rfa_A	232	Transient receptor potential cation channel subfa	7e-08
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-39
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	6e-39
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-37
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	4e-36
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-27
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	2e-21
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-14
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-13
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	7e-10
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	3e-06
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	1e-05
2etb_A	256	Transient receptor potential cation channel subfam	7e-38
2etb_A	256	Transient receptor potential cation channel subfam	6e-31
2etb_A	256	Transient receptor potential cation channel subfam	2e-28
2etb_A	256	Transient receptor potential cation channel subfam	5e-25
2etb_A	256	Transient receptor potential cation channel subfam	2e-23
2etb_A	256	Transient receptor potential cation channel subfam	4e-21
2etb_A	256	Transient receptor potential cation channel subfam	8e-10
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-37
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-37
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	4e-33
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	5e-33
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	7e-25
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-23
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-23
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	3e-20
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	1e-16
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-11
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	2e-07
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	6e-05
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-37
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	6e-37
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-36
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	4e-31
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-26
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	8e-26
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	1e-24
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-23
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-15
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	8e-11
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-07
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	2e-05
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	3e-04
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-36
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	4e-36
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-31
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-29
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-22
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-21
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	1e-18
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	2e-14
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-09
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	3e-07
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-33
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	7e-29
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	1e-27
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-27
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-26
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	3e-23
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-21
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-20
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-13
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	5e-12
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	2e-07
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-06
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	4e-06
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-32
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	6e-30
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	4e-29
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	6e-27
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	3e-22
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	1e-21
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-19
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-18
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	8e-12
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	2e-04
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-32
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	7e-29
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-28
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-27
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-27
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-21
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-19
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	2e-18
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	1e-14
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	8e-10
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	3e-06
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	6e-06
2pnn_A	273	Transient receptor potential cation channel subfa	3e-32
2pnn_A	273	Transient receptor potential cation channel subfa	9e-30
2pnn_A	273	Transient receptor potential cation channel subfa	2e-29
2pnn_A	273	Transient receptor potential cation channel subfa	4e-28
2pnn_A	273	Transient receptor potential cation channel subfa	3e-26
2pnn_A	273	Transient receptor potential cation channel subfa	4e-26
2pnn_A	273	Transient receptor potential cation channel subfa	3e-12
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-30
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-27
3jxi_A	260	Vanilloid receptor-related osmotically activated p	2e-26
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-23
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-23
3jxi_A	260	Vanilloid receptor-related osmotically activated p	4e-20
3jxi_A	260	Vanilloid receptor-related osmotically activated p	3e-19
3jxi_A	260	Vanilloid receptor-related osmotically activated p	1e-16
3jxi_A	260	Vanilloid receptor-related osmotically activated p	8e-06
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-28
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-27
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	7e-23
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	5e-22
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	4e-21
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-20
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	1e-16
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	2e-12
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-16
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	4e-15
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	1e-14
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-12
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-09
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	3e-09
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	2e-06
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-15
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	2e-14
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	4e-14
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	9e-13
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	4e-12
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	3e-11
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	8e-08
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	5e-15
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	8e-13
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	9e-13
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	9e-11
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-09
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	3e-09
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	1e-05
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	8e-04
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-14
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	5e-10
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	6e-09
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	1e-08
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	4e-08
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	2e-06
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	1e-07
1vt4_I	1221	APAF-1 related killer DARK; drosophila apoptosome,	6e-05

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  363 bits (935), Expect = e-119
 Identities = 128/501 (25%), Positives = 185/501 (36%), Gaps = 88/501 (17%)

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239
            +    G  G  TPL  A+  G + IV+ L+  GA  N  +    TPL  A   GH  V 
Sbjct: 5   ISGGGGGESG-LTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVA 63

Query: 240 RVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACY 299
           + LL+  A V    ++  TPL  AA  GH  + K+LLE  A  N  +     + L +A  
Sbjct: 64  KYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTA-GHTPLHIAAR 122

Query: 300 KGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFF 359
           +GH++ V  LL   A Q   T +  T L  A+  G V VA+LLL+  A            
Sbjct: 123 EGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH----------- 171

Query: 360 PNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY 419
                                                    +     G + L +A     
Sbjct: 172 ----------------------------------------PNAAGKNGLTPLHVAVHHNN 191

Query: 420 YELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGL 479
            ++ ++LL    +       G  TPL  AA           V                  
Sbjct: 192 LDIVKLLLPRGGSPHSPAWNG-YTPLHIAAKQN-----QVEV------------------ 227

Query: 480 QASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEA 536
            A  +L  G   NA + +   T L LA   G  ++   LL   AN  LG     TPL   
Sbjct: 228 -ARSLLQYGGSANAESVQ-GVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLV 285

Query: 537 AQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNS 591
           AQEGH+ +   L+  G  V A T+ G T L  A   G+  +   LL + A++        
Sbjct: 286 AQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGY 345

Query: 592 TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 651
           + L +AA+ GH ++V LLL    S +  +  G T L  A   G+  V D+L         
Sbjct: 346 SPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSF 405

Query: 652 STMLIEAAKGGHANVVQLLLD 672
              + +  +      V  +LD
Sbjct: 406 VL-VSDKHRMSFPETVDEILD 425

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  356 bits (916), Expect = e-116
 Identities = 128/518 (24%), Positives = 196/518 (37%), Gaps = 95/518 (18%)

Query: 146 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEI 205
           G S     + G + L +A   G+  + + LL   A+     +K E TPL  AA +G  E+
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE-TPLHMAARAGHTEV 62

Query: 206 VRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAAS 265
            + L+ + A VN ++    TPL  A   GH  +V++LLE  AN       GHTPL  AA 
Sbjct: 63  AKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAR 122

Query: 266 AGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHT 325
            GHV     LLE  A     + +   + L +A   G + +   LL   A          T
Sbjct: 123 EGHVETVLALLEKEASQACMTKK-GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLT 181

Query: 326 ALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDG 385
            L  A    ++++ KLLL  G                                       
Sbjct: 182 PLHVAVHHNNLDIVKLLLPRGG-------------------------------------- 203

Query: 386 DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPL 445
                        S H     G + L +A      E+A+ LL    +     ++G  TPL
Sbjct: 204 -------------SPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGV-TPL 249

Query: 446 MEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILI-PGAKINAHTEETQETALT 504
             AA  G     +  + A                     L+   A  N   +    T L 
Sbjct: 250 HLAAQEG-----HAEMVAL--------------------LLSKQANGNLGNKS-GLTPLH 283

Query: 505 LACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQT 561
           L    G + VAD L+K+G  ++       TPL  A+  G+++LV++LL   A V+AKT+ 
Sbjct: 284 LVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKL 343

Query: 562 GDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSV 616
           G + L  A + GHTD+  LLL  GA+      D +T L  A + G+ +V  +L       
Sbjct: 344 GYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLK------ 397

Query: 617 HAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTM 654
               +T    ++        +  D +L    +     +
Sbjct: 398 VVTDETSFVLVSDKHRMSFPETVDEILDVSEDEGEELI 435

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  354 bits (910), Expect = e-115
 Identities = 138/537 (25%), Positives = 202/537 (37%), Gaps = 124/537 (23%)

Query: 212 HGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGV 271
            G    G   SG TPL  A   GH  +V+ LL+ GA+    N    TPL  AA AGH  V
Sbjct: 3   PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEV 62

Query: 272 AKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEAS 331
           AK LL+  A +N  + +  ++ L  A   GH +MV+ LL   A+    T   HT L  A+
Sbjct: 63  AKYLLQNKAKVNAKAKD-DQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAA 121

Query: 332 MDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVK 391
            +GHVE    LL+  A                                            
Sbjct: 122 REGHVETVLALLEKEA-------------------------------------------- 137

Query: 392 KLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS 451
                  S    T +G + L +A   G   +A++LL   A+    G  G  TPL  A   
Sbjct: 138 -------SQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGL-TPLHVAVHH 189

Query: 452 GRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGG 510
                  + V                      +L+P G   ++       T L +A    
Sbjct: 190 NNL----DIVK---------------------LLLPRGGSPHSPAWN-GYTPLHIAAKQN 223

Query: 511 FLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALT 567
            ++VA  LL+ G +    +    TPL  AAQEGH E+V  LL   A  +   ++G T L 
Sbjct: 224 QVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLH 283

Query: 568 YACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQT 622
              + GH  VAD+L+ +G  +        T L  A+  G+  +V+ LL     V+AKT+ 
Sbjct: 284 LVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKL 343

Query: 623 GDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSV 677
           G + L  A + GHTD+  LLL  GA+      D +T L  A + G+ +V  +L       
Sbjct: 344 GYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTD-- 401

Query: 678 IGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                               + S V    +   +           +  D +L    +
Sbjct: 402 --------------------ETSFVLVSDKHRMSFP---------ETVDEILDVSED 429

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  326 bits (838), Expect = e-104
 Identities = 127/486 (26%), Positives = 195/486 (40%), Gaps = 85/486 (17%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           A   G +  VK LL  G S + +  + E+ L +A  AG+ E+A+ LL   A V  +    
Sbjct: 21  ASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDD 80

Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
             TPL  AA  G   +V+LL+ + A+ N  +++G+TPL  A   GH   V  LLE  A+ 
Sbjct: 81  -QTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQ 139

Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
               + G TPL  AA  G V VA++LLE  A  N  + +   + L +A +  +LD+V+ L
Sbjct: 140 ACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN-AAGKNGLTPLHVAVHHNNLDIVKLL 198

Query: 310 LSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSS 369
           L  G          +T L  A+    VEVA+ LL  G                       
Sbjct: 199 LPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS--------------------- 237

Query: 370 ISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM 429
                                          +  + +G + L LA   G+ E+  +LL+ 
Sbjct: 238 ------------------------------ANAESVQGVTPLHLAAQEGHAEMVALLLSK 267

Query: 430 HANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-G 488
            AN       G  TPL   A  G                          +  + +LI  G
Sbjct: 268 QANGNLGNKSGL-TPLHLVAQEGH-------------------------VPVADVLIKHG 301

Query: 489 AKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELV 545
             ++A T     T L +A   G + +  FLL++ A++        +PL +AAQ+GH ++V
Sbjct: 302 VMVDATTRM-GYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIV 360

Query: 546 RYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANV 605
             LL +GA  +  +  G T L  A   G+  V D+L            + +  +      
Sbjct: 361 TLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVL-VSDKHRMSFPET 419

Query: 606 VQLLLD 611
           V  +LD
Sbjct: 420 VDEILD 425

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  282 bits (723), Expect = 9e-88
 Identities = 130/541 (24%), Positives = 196/541 (36%), Gaps = 112/541 (20%)

Query: 21  GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL 80
           G S     + G + L +A   G+  + + LL   A+     +K E TPL  AA +G    
Sbjct: 4   GISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE-TPLHMAARAG---- 58

Query: 81  ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERS-LVQACSDGDVKTV 139
                     EV + L       L   A         N + +++++ L  A   G    V
Sbjct: 59  --------HTEVAKYL-------LQNKA-------KVNAKAKDDQTPLHCAARIGHTNMV 96

Query: 140 KKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS 199
           K LL    + +  T  G + L +A   G+ E    LL   A+      KG  TPL  AA 
Sbjct: 97  KLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKG-FTPLHVAAK 155

Query: 200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTP 259
            G + +  LL+   A  N    +G TPL  A    +  +V++LL  G +      NG+TP
Sbjct: 156 YGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTP 215

Query: 260 LMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHK 319
           L  AA    V VA+ LL+YG   N  S +   + L LA  +GH +MV  LLS  A+    
Sbjct: 216 LHIAAKQNQVEVARSLLQYGGSANAESVQ-GVTPLHLAAQEGHAEMVALLLSKQANGNLG 274

Query: 320 TDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLV 379
                T L   + +GHV VA +L+  G                                 
Sbjct: 275 NKSGLTPLHLVAQEGHVPVADVLIKHGVM------------------------------- 303

Query: 380 QACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK 439
                               V  TT  G + L +A   G  +L + LL   A+V  +   
Sbjct: 304 --------------------VDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKL 343

Query: 440 GECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEET 498
           G  +PL +AA  G      + V+                     +L+  GA  N  + + 
Sbjct: 344 GY-SPLHQAAQQGHT----DIVT---------------------LLLKNGASPNEVSSD- 376

Query: 499 QETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAK 558
             T L +A   G++ V D L          +   + +  +    E V  +LD       +
Sbjct: 377 GTTPLAIAKRLGYISVTDVLKVVTDE---TSFVLVSDKHRMSFPETVDEILDVSEDEGEE 433

Query: 559 T 559
            
Sbjct: 434 L 434

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  273 bits (702), Expect = 9e-85
 Identities = 118/432 (27%), Positives = 178/432 (41%), Gaps = 48/432 (11%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A   G +  VK LL  G S + +  + E+ L +A  AG+ E+A+ LL   A V  +    
Sbjct: 21  ASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDD 80

Query: 65  ECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE 124
             TPL  AA  G               +++ L       L+  A       N N      
Sbjct: 81  -QTPLHCAARIG------------HTNMVKLL-------LENNA-------NPNLATTAG 113

Query: 125 RS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 183
            + L  A  +G V+TV  LL +  S    T +G + L +A   G   +A++LL   A+  
Sbjct: 114 HTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPN 173

Query: 184 DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL 243
             G  G  TPL  A     ++IV+LL+  G   +  + +G TPL  A       V R LL
Sbjct: 174 AAGKNGL-TPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLL 232

Query: 244 ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHL 303
           + G +    +  G TPL  AA  GH  +  +LL   A  N   N+   + L L   +GH+
Sbjct: 233 QYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN-LGNKSGLTPLHLVAQEGHV 291

Query: 304 DMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDK 363
            +   L+  G   +  T   +T L  AS  G++++ K LL   A  V+A  +  + P   
Sbjct: 292 PVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQAD-VNAKTKLGYSP--- 347

Query: 364 CERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELA 423
                         L QA   G    V  LL  G S +E + +G + L++A   GY  + 
Sbjct: 348 --------------LHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVT 393

Query: 424 QVLLAMHANVED 435
            VL  +      
Sbjct: 394 DVLKVVTDETSF 405

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  248 bits (636), Expect = 4e-75
 Identities = 101/438 (23%), Positives = 147/438 (33%), Gaps = 117/438 (26%)

Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSI 370
           S G       +   T L  AS  GH+ + K LL  GA                       
Sbjct: 2   SPGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGA----------------------- 38

Query: 371 SYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 430
                                       S + +  + E+ L +A  AG+ E+A+ LL   
Sbjct: 39  ----------------------------SPNVSNVKVETPLHMAARAGHTEVAKYLLQNK 70

Query: 431 ANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GA 489
           A V  +      TPL  AA  G                               +L+   A
Sbjct: 71  AKVNAKAKDD-QTPLHCAARIGH-------------------------TNMVKLLLENNA 104

Query: 490 KINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVR 546
             N  T     T L +A   G ++    LL+  A+         TPL  AA+ G + +  
Sbjct: 105 NPNLATTA-GHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAE 163

Query: 547 YLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGG 601
            LL+  A  +A  + G T L  A  + + D+  LLL  G +      +  T L  AAK  
Sbjct: 164 LLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQN 223

Query: 602 HANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLI 656
              V + LL +  S +A++  G T L  A + GH ++  LLLS  AN         T L 
Sbjct: 224 QVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLH 283

Query: 657 EAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYA 716
             A+ GH  V  +L+                              V A T+ G T L  A
Sbjct: 284 LVAQEGHVPVADVLIK-------------------------HGVMVDATTRMGYTPLHVA 318

Query: 717 CENGHTDVADLLLSYGAN 734
              G+  +   LL + A+
Sbjct: 319 SHYGNIKLVKFLLQHQAD 336

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  215 bits (550), Expect = 1e-62
 Identities = 84/347 (24%), Positives = 138/347 (39%), Gaps = 42/347 (12%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A  +G V+TV  LL +  S    T +G + L +A   G   +A++LL   A+    G  G
Sbjct: 120 AAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNG 179

Query: 65  ECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE 124
             TPL  A                + ++++ L       L           + +    N 
Sbjct: 180 L-TPLHVAVHHN------------NLDIVKLL-------LPRGG-------SPHSPAWNG 212

Query: 125 RS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 183
            + L  A     V+  + LL  G S +  + +G + L LA   G+ E+  +LL+  AN  
Sbjct: 213 YTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN 272

Query: 184 DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL 243
                G  TPL   A  G + +  +LI HG  V+  +  G TPL  A   G+  +V+ LL
Sbjct: 273 LGNKSGL-TPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLL 331

Query: 244 ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHL 303
           +  A+V    + G++PL +AA  GH  +  +LL+ GA  N   +    + L +A   G++
Sbjct: 332 QHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPN-EVSSDGTTPLAIAKRLGYI 390

Query: 304 DMVRFL---LSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
            +   L       +          +           E    +LD   
Sbjct: 391 SVTDVLKVVTDETSFVLVSDKHRMSFP---------ETVDEILDVSE 428

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1 Length = 437

 Score =  190 bits (486), Expect = 1e-53
 Identities = 73/323 (22%), Positives = 121/323 (37%), Gaps = 42/323 (13%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           L  A   G V+  + LL      +     G + L +A      ++ ++LL    +     
Sbjct: 150 LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPA 209

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
             G  TPL  AA                 EV R L       L           + N   
Sbjct: 210 WNG-YTPLHIAAKQNQ------------VEVARSL-------LQYGG-------SANAES 242

Query: 122 QNERS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 180
               + L  A  +G  + V  LL++  + +     G + L L    G+  +A VL+    
Sbjct: 243 VQGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGV 302

Query: 181 NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR 240
            V+     G  TPL  A+  G I++V+ L+ H ADVN ++  G +PL  A   GH  +V 
Sbjct: 303 MVDATTRMG-YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVT 361

Query: 241 VLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL---LEYGAGINTHSNEFKESALTLA 297
           +LL+ GA+  + + +G TPL  A   G++ V  +L    +  + +               
Sbjct: 362 LLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVSDKH--------- 412

Query: 298 CYKGHLDMVRFLLSAGADQEHKT 320
                 + V  +L    D+  + 
Sbjct: 413 -RMSFPETVDEILDVSEDEGEEL 434

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  250 bits (642), Expect = 5e-77
 Identities = 99/438 (22%), Positives = 152/438 (34%), Gaps = 102/438 (23%)

Query: 172 AQVLLAMHANVEDRGIKGECTPLMEAASSG-FIEIVRLLINHGADVNGQSSSGNTPLMYA 230
           A  L    A     G   +   L+EAA SG   +++ LL     + +      +TPL  A
Sbjct: 7   ALDLADPSAKAVLTGEYKK-DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLA 65

Query: 231 CAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFK 290
                  +V++LL+ GA+V   ++ G  PL  A S GH  V ++LL++GA +N   + ++
Sbjct: 66  AGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVN-AMDLWQ 124

Query: 291 ESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSV 350
            + L  A  K  +++   LLS GAD         +A+  A      E         +   
Sbjct: 125 FTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHS--- 181

Query: 351 SAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 410
                                      L+QA  + D+  VKK L       +     E+ 
Sbjct: 182 ---------------------------LLQAAREADLAKVKKTLALEIINFKQPQSHETA 214

Query: 411 LSLACSAGYY---ELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARH 467
           L  A ++ +    ++A++LL   ANV ++      TPL  AA                  
Sbjct: 215 LHCAVASLHPKRKQVAELLLRKGANVNEKNKDF-MTPLHVAAERAH-------------- 259

Query: 468 DFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIE 526
                           +L   GAK+NA                            G    
Sbjct: 260 -----------NDVMEVLHKHGAKMNALD------------------------SLG---- 280

Query: 527 LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA 586
               T L  AA  GHL+  R LL  G+     +  G TA     E         +LS   
Sbjct: 281 ---QTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGNEA-----VQQILSEST 332

Query: 587 NL---DNSTMLIEAAKGG 601
            +   D    L+EA+K G
Sbjct: 333 PMRTSDVDYRLLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  245 bits (629), Expect = 4e-75
 Identities = 95/469 (20%), Positives = 141/469 (30%), Gaps = 133/469 (28%)

Query: 204 EIVRLLINHGADVNGQSSSGNTPLMYACA-GGHEAVVRVLLECGANVEDHNENGHTPLME 262
           +    L +  A            L+ A   G  E ++ +L     N    +    TPL  
Sbjct: 5   KSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHL 64

Query: 263 AASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDE 322
           AA    V + ++LL++GA ++   ++     L  AC  GH ++   LL  GA        
Sbjct: 65  AAGYNRVRIVQLLLQHGADVH-AKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLW 123

Query: 323 MHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQAC 382
             T L EA+    VEV  L                                         
Sbjct: 124 QFTPLHEAASKNRVEVCSL----------------------------------------- 142

Query: 383 SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGEC 442
                     LL+ G         G+S + +A +    E        H+           
Sbjct: 143 ----------LLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHS----------- 181

Query: 443 TPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETA 502
             L++AA                      +   V        L          +   ETA
Sbjct: 182 --LLQAAREA-------------------DLAKVKKT-----LALEIINFKQPQS-HETA 214

Query: 503 LTLACCGGF---LDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVH 556
           L  A          VA+ LL+ GAN+        TPL  AA+  H +++  L   GA+++
Sbjct: 215 LHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN 274

Query: 557 AKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSV 616
           A    G TAL  A   GH     LLLSYG++                             
Sbjct: 275 ALDSLGQTALHRAALAGHLQTCRLLLSYGSD----------------------------P 306

Query: 617 HAKTQTGDTALTYACENGHTDVADLLLSYGANL---DNSTMLIEAAKGG 662
              +  G TA     E         +LS    +   D    L+EA+K G
Sbjct: 307 SIISLQGFTAAQMGNEA-----VQQILSESTPMRTSDVDYRLLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  229 bits (586), Expect = 7e-69
 Identities = 98/445 (22%), Positives = 146/445 (32%), Gaps = 107/445 (24%)

Query: 137 KTVKKLLTEGRSVHETTDEGE-SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM 195
           K+   L         T +  +  LL  A S    +L  +L  ++ N      +   TPL 
Sbjct: 5   KSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRK-STPLH 63

Query: 196 EAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNEN 255
            AA    + IV+LL+ HGADV+ +   G  PL  AC+ GH  V  +LL+ GA V   +  
Sbjct: 64  LAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLW 123

Query: 256 GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD 315
             TPL EAA                                   K  +++   LLS GAD
Sbjct: 124 QFTPLHEAA----------------------------------SKNRVEVCSLLLSHGAD 149

Query: 316 QEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYS 375
                    +A+  A      E         +                            
Sbjct: 150 PTLVNCHGKSAVDMAPTPELRERLTYEFKGHS---------------------------- 181

Query: 376 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYY---ELAQVLLAMHAN 432
             L+QA  + D+  VKK L       +     E+ L  A ++ +    ++A++LL   AN
Sbjct: 182 --LLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN 239

Query: 433 VEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKI 491
           V ++      TPL  AA                                  +L   GAK+
Sbjct: 240 VNEKNKDF-MTPLHVAAERAH-------------------------NDVMEVLHKHGAKM 273

Query: 492 NAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYL 548
           NA      +TAL  A   G L     LL  G++  + +    T           E V+ +
Sbjct: 274 NALDSL-GQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN-----EAVQQI 327

Query: 549 LDSGAQVHAKTQTGDTALTYACENG 573
           L     +       D  L  A + G
Sbjct: 328 LSESTPMRTS--DVDYRLLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  208 bits (533), Expect = 3e-61
 Identities = 86/360 (23%), Positives = 132/360 (36%), Gaps = 72/360 (20%)

Query: 388 KTVKKLLTEGRSVHETTDEGE-SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM 446
           K+   L         T +  +  LL  A S    +L  +L  ++ N      +   TPL 
Sbjct: 5   KSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRK-STPLH 63

Query: 447 EAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTL 505
            AA   R                         ++   +L+  GA ++A  +      L  
Sbjct: 64  LAAGYNR-------------------------VRIVQLLLQHGADVHAKDKG-GLVPLHN 97

Query: 506 ACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTG 562
           AC  G  +V + LLK+GA +        TPL EAA +  +E+   LL  GA        G
Sbjct: 98  ACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHG 157

Query: 563 DTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQT 622
            +A+  A      +         +       L++AA+      V+  L        + Q+
Sbjct: 158 KSAVDMAPTPELRERLTYEFKGHS-------LLQAAREADLAKVKKTLALEIINFKQPQS 210

Query: 623 GDTALTYACENGH---TDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFP 674
            +TAL  A  + H     VA+LLL  GAN+     D  T L  AA+  H +V+++L    
Sbjct: 211 HETALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLH--- 267

Query: 675 RSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                                 G  + ++A    G TAL  A   GH     LLLSYG++
Sbjct: 268 --------------------KHG--AKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSD 305

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  203 bits (519), Expect = 2e-59
 Identities = 100/483 (20%), Positives = 141/483 (29%), Gaps = 155/483 (32%)

Query: 267 GHVG-VAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHT 325
           G  G  A  L +  A         K+  L  A       ++  L     +         T
Sbjct: 1   GEFGKSALDLADPSAKAVLTGEYKKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKST 60

Query: 326 ALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDG 385
            L  A+    V + +LLL  GA                                      
Sbjct: 61  PLHLAAGYNRVRIVQLLLQHGA-------------------------------------- 82

Query: 386 DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPL 445
                         VH     G   L  ACS G+YE+ ++LL   A V    +    TPL
Sbjct: 83  -------------DVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQF-TPL 128

Query: 446 MEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALT 504
            EAAS  R     E  S                     +L+  GA          ++A+ 
Sbjct: 129 HEAASKNRV----EVCS---------------------LLLSHGADPTLVNCH-GKSAVD 162

Query: 505 LACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDT 564
           +A      +   +  K  +         L++AA+E  L  V+  L        + Q+ +T
Sbjct: 163 MAPTPELRERLTYEFKGHS---------LLQAAREADLAKVKKTLALEIINFKQPQSHET 213

Query: 565 ALTYACENGH---TDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQ 621
           AL  A  + H     VA+LLL  GAN                            V+ K +
Sbjct: 214 ALHCAVASLHPKRKQVAELLLRKGAN----------------------------VNEKNK 245

Query: 622 TGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRS 676
              T L  A E  H DV ++L  +GA +        T L  AA  GH    +LLL     
Sbjct: 246 DFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLL----- 300

Query: 677 VIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANLR 736
                             S G  S     +  G TA     E         +LS    +R
Sbjct: 301 ------------------SYG--SDPSIISLQGFTAAQMGNEA-----VQQILSESTPMR 335

Query: 737 NRT 739
              
Sbjct: 336 TSD 338

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  200 bits (510), Expect = 5e-58
 Identities = 73/331 (22%), Positives = 121/331 (36%), Gaps = 37/331 (11%)

Query: 123 NERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 181
            +  L++A   G+ + +  LLT    + H +     + L LA       + Q+LL   A+
Sbjct: 24  KKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGAD 83

Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           V  +   G   PL  A S G  E+  LL+ HGA VN       TPL  A +     V  +
Sbjct: 84  VHAKDKGGL-VPLHNACSYGHYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSL 142

Query: 242 LLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKG 301
           LL  GA+    N +G + +  A +           +  + +              A  + 
Sbjct: 143 LLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKGHSLLQ-------------AAREA 189

Query: 302 HLDMVRFLLSAGADQEHKTDEMHTALMEASMDGH---VEVAKLLLDSGAQSVSAYARHDF 358
            L  V+  L+       +     TAL  A    H    +VA+LLL  GA           
Sbjct: 190 DLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGAN---------- 239

Query: 359 FPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG 418
             N+K +       T    L  A        ++ L   G  ++     G++ L  A  AG
Sbjct: 240 -VNEKNKD----FMT---PLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAG 291

Query: 419 YYELAQVLLAMHANVEDRGIKGECTPLMEAA 449
           + +  ++LL+  ++     ++G  T      
Sbjct: 292 HLQTCRLLLSYGSDPSIISLQGF-TAAQMGN 321

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  177 bits (451), Expect = 8e-50
 Identities = 85/352 (24%), Positives = 130/352 (36%), Gaps = 51/352 (14%)

Query: 1   SLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 59
            L++A   G+ + +  LLT    + H +     + L LA       + Q+LL   A+V  
Sbjct: 27  ELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHA 86

Query: 60  RGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENP 119
           +   G   PL  A S G              EV   L       L   A         N 
Sbjct: 87  KDKGGL-VPLHNACSYG------------HYEVTELL-------LKHGA-------CVNA 119

Query: 120 RPQNERS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM 178
               + + L +A S   V+    LL+ G         G+S + +A +    E        
Sbjct: 120 MDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG 179

Query: 179 HANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA- 237
           H+             L++AA    +  V+  +        Q  S  T L  A A  H   
Sbjct: 180 HS-------------LLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKR 226

Query: 238 --VVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALT 295
             V  +LL  GANV + N++  TPL  AA   H  V ++L ++GA +N   +   ++AL 
Sbjct: 227 KQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMN-ALDSLGQTALH 285

Query: 296 LACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
            A   GHL   R LLS G+D    + +  TA    +     E  + +L    
Sbjct: 286 RAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMGN-----EAVQQILSEST 332

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score =  172 bits (438), Expect = 6e-48
 Identities = 81/334 (24%), Positives = 125/334 (37%), Gaps = 52/334 (15%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A     V+ V+ LL  G  VH     G   L  ACS G+YE+ ++LL   A V    +  
Sbjct: 65  AAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYEVTELLLKHGACVNAMDLWQ 124

Query: 65  ECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE 124
             TPL EAAS    ++           +L          L   A       +      + 
Sbjct: 125 F-TPLHEAASKNRVEVC---------SLL----------LSHGA-------DPTLVNCHG 157

Query: 125 RS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 183
           +S +  A +    + +               +G SLL  A         +  LA+     
Sbjct: 158 KSAVDMAPTPELRERLTYEF-----------KGHSLL-QAAREADLAKVKKTLALEIINF 205

Query: 184 DRGIKGECTPLMEAASSGF---IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR 240
            +    E T L  A +S      ++  LL+  GA+VN ++    TPL  A    H  V+ 
Sbjct: 206 KQPQSHE-TALHCAVASLHPKRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVME 264

Query: 241 VLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYK 300
           VL + GA +   +  G T L  AA AGH+   ++LL YG+  +   +    +A  +    
Sbjct: 265 VLHKHGAKMNALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSI-ISLQGFTAAQMGN-- 321

Query: 301 GHLDMVRFLLSAGADQEHKTDEMHTALMEASMDG 334
              + V+ +LS               L+EAS  G
Sbjct: 322 ---EAVQQILSESTPMRTSDV--DYRLLEASKAG 350

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus} Length = 351

 Score = 63.3 bits (155), Expect = 8e-11
 Identities = 42/238 (17%), Positives = 73/238 (30%), Gaps = 72/238 (30%)

Query: 1   SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYY---ELAQVLLAMHANV 57
           SL+QA  + D+  VKK L       +     E+ L  A ++ +    ++A++LL   ANV
Sbjct: 181 SLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLLRKGANV 240

Query: 58  EDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNE 117
            ++      TPL  AA      +          EVL              A         
Sbjct: 241 NEKNKDF-MTPLHVAAERAHNDVM---------EVL----------HKHGA-------KM 273

Query: 118 NPRPQNERS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 176
           N      ++ L +A   G ++T + LL+ G      + +G                    
Sbjct: 274 NALDSLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGF------------------- 314

Query: 177 AMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG 234
                          T           E V+ +++    +       +  L+ A   G
Sbjct: 315 ---------------TAAQMGN-----EAVQQILSESTPMRTS--DVDYRLLEASKAG 350

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  234 bits (599), Expect = 1e-71
 Identities = 73/306 (23%), Positives = 122/306 (39%), Gaps = 27/306 (8%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
             S         L+  G  +  + D  +  +  +  AG  +   + L  +  + D     
Sbjct: 2   GSSHHHHHHSSGLVPRGSHM-ASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDA--VS 58

Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
           + +P+ EAA  G    +R LI+ G  VN  ++   +PL  AC GGH + V++LL+ GA V
Sbjct: 59  DWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQV 118

Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
                + HTPL  A  +G      +LL++GA +   S+    S +  A  +GH++ V  L
Sbjct: 119 NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD--LASPIHEAARRGHVECVNSL 176

Query: 310 LSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSS 369
           ++ G + +HK   + T L  A  +      K LL+SGA             N    +   
Sbjct: 177 IAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGAD-----------VNQGKGQ--- 222

Query: 370 ISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM 429
              +    L         +    L+  G        EG+  + L        LAQ+ L  
Sbjct: 223 --DS---PLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPES--PLAQLFLER 275

Query: 430 H-ANVE 434
             A++ 
Sbjct: 276 EGASLP 281

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  208 bits (532), Expect = 5e-62
 Identities = 66/316 (20%), Positives = 111/316 (35%), Gaps = 43/316 (13%)

Query: 37  LACSAGYYELAQVLLAMHANVEDRGIKGE----CTPLMEAASSGFGKLATGDGKLADPEV 92
           +  S  ++  +  L+   +++     K        P       G   L+           
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPL-------- 52

Query: 93  LRRLTSSVSCALDEAAAALTRMRNENPRPQNERS-LVQACSDGDVKTVKKLLTEGRSVHE 151
                                         ++ S + +A   G   +++ L+++G +V+ 
Sbjct: 53  -------------------------MGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNI 87

Query: 152 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLIN 211
            T +  S L  AC  G+    ++LL   A V         TPL  A  SG  + V LL+ 
Sbjct: 88  ITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADW-HTPLFNACVSGSWDCVNLLLQ 146

Query: 212 HGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGV 271
           HGA V  +S    +P+  A   GH   V  L+  G N++    +  TPL  A        
Sbjct: 147 HGASVQPESD-LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRAC 205

Query: 272 AKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEAS 331
            K LLE GA +N    + ++S L         ++   L+  GAD + K  E    +    
Sbjct: 206 VKKLLESGADVNQ--GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP 263

Query: 332 MDGHVEVAKLLLDSGA 347
            +  +     L   GA
Sbjct: 264 PESPLAQ-LFLEREGA 278

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  201 bits (513), Expect = 2e-59
 Identities = 69/342 (20%), Positives = 111/342 (32%), Gaps = 74/342 (21%)

Query: 413 LACSAGYYELAQVLLAMHANVEDRGIKGE----CTPLMEAASSGRQCNLNESVSAYARHD 468
           +  S  ++  +  L+   +++     K        P       G +   N          
Sbjct: 1   MGSSHHHHHHSSGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSN---------- 50

Query: 469 FFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELG 528
                 +V+                       + +  A   G       L+  G  + + 
Sbjct: 51  -PLMGDAVSD---------------------WSPMHEAAIHGHQLSLRNLISQGWAVNII 88

Query: 529 AS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYG 585
            +   +PL EA   GHL  V+ LL  GAQV+  T    T L  AC +G  D  +LLL +G
Sbjct: 89  TADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHG 148

Query: 586 ANL----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADL 641
           A++    D ++ + EAA+ GH   V  L+ +  ++  K     T L  ACEN        
Sbjct: 149 ASVQPESDLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKK 208

Query: 642 LLSYGANL----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQG 697
           LL  GA++       + L    +     +  LL+DF     G                  
Sbjct: 209 LLESGADVNQGKGQDSPLHAVVRTASEELACLLMDF-----GAD---------------- 247

Query: 698 KKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANLRNRT 739
                 AK   G   +              L   GA+L  + 
Sbjct: 248 ----TQAKNAEGKRPVELVPPESPLAQL-FLEREGASL-PKP 283

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  192 bits (490), Expect = 4e-56
 Identities = 74/396 (18%), Positives = 114/396 (28%), Gaps = 119/396 (30%)

Query: 197 AASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENG 256
            +S         L+  G+ +          +  +   G      + L     + D   + 
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDGKQ-GGMDGSKPAGPRDFPGIRLLSNPLMGD-AVSD 59

Query: 257 HTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQ 316
            +P+ EAA                                    GH   +R L+S G   
Sbjct: 60  WSPMHEAA----------------------------------IHGHQLSLRNLISQGWAV 85

Query: 317 EHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSR 376
              T +  + L EA + GH+   K+LL  GAQ                            
Sbjct: 86  NIITADHVSPLHEACLGGHLSCVKILLKHGAQ---------------------------- 117

Query: 377 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 436
                                  V+  T +  + L  AC +G ++   +LL   A+V+  
Sbjct: 118 -----------------------VNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE 154

Query: 437 GIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILI-PGAKINAHT 495
                 +P+ EAA  G      E V+                      LI  G  I+   
Sbjct: 155 --SDLASPIHEAARRGHV----ECVN---------------------SLIAYGGNIDHKI 187

Query: 496 EETQETALTLACCGGFLDVADFLLKNGANIELGAS--TPLMEAAQEGHLELVRYLLDSGA 553
                T L LAC          LL++GA++  G    +PL    +    EL   L+D GA
Sbjct: 188 SH-LGTPLYLACENQQRACVKKLLESGADVNQGKGQDSPLHAVVRTASEELACLLMDFGA 246

Query: 554 QVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 589
              AK   G   +              L   GA+L 
Sbjct: 247 DTQAKNAEGKRPVELVPPESPLAQL-FLEREGASLP 281

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  191 bits (488), Expect = 1e-55
 Identities = 67/392 (17%), Positives = 118/392 (30%), Gaps = 116/392 (29%)

Query: 263 AASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDE 322
            +S  H   +  L+  G+ + +     K+  +  +   G  D     L +         +
Sbjct: 2   GSSHHHHHHSSGLVPRGSHMASMDG--KQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSD 59

Query: 323 MHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQAC 382
             + + EA++ GH    + L+  G                                    
Sbjct: 60  W-SPMHEAAIHGHQLSLRNLISQGW----------------------------------- 83

Query: 383 SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGEC 442
                           +V+  T +  S L  AC  G+    ++LL   A V         
Sbjct: 84  ----------------AVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTADW-H 126

Query: 443 TPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQET 501
           TPL  A  SG      + V+                     +L+  GA +   ++    +
Sbjct: 127 TPLFNACVSGSW----DCVN---------------------LLLQHGASVQPESDL--AS 159

Query: 502 ALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAK 558
            +  A   G ++  + L+  G NI+   S   TPL  A +      V+ LL+SGA V+ +
Sbjct: 160 PIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQQRACVKKLLESGADVN-Q 218

Query: 559 TQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHA 618
            +  D+ L         ++A LL+ +GA+                              A
Sbjct: 219 GKGQDSPLHAVVRTASEELACLLMDFGAD----------------------------TQA 250

Query: 619 KTQTGDTALTYACENGHTDVADLLLSYGANLD 650
           K   G   +              L   GA+L 
Sbjct: 251 KNAEGKRPVELVPPESPLAQL-FLEREGASLP 281

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score =  152 bits (386), Expect = 2e-41
 Identities = 56/257 (21%), Positives = 87/257 (33%), Gaps = 32/257 (12%)

Query: 28  TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKL 87
                S +  A   G+    + L++    V         +PL EA   G           
Sbjct: 56  AVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADH-VSPLHEACLGGHLSCV------ 108

Query: 88  ADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERS-LVQACSDGDVKTVKKLLTEG 146
              ++L          L   A         N    +  + L  AC  G    V  LL  G
Sbjct: 109 ---KIL----------LKHGA-------QVNGVTADWHTPLFNACVSGSWDCVNLLLQHG 148

Query: 147 RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIV 206
            SV   +D   S +  A   G+ E    L+A   N++ +      TPL  A  +     V
Sbjct: 149 ASVQPESD-LASPIHEAARRGHVECVNSLIAYGGNIDHKISHL-GTPLYLACENQQRACV 206

Query: 207 RLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASA 266
           + L+  GADVN Q    ++PL        E +  +L++ GA+ +  N  G  P+      
Sbjct: 207 KKLLESGADVN-QGKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPE 265

Query: 267 GHVGVAKILLEYGAGIN 283
             +     L   GA + 
Sbjct: 266 SPL-AQLFLEREGASLP 281

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens} Length = 285

 Score = 93.3 bits (233), Expect = 4e-21
 Identities = 53/249 (21%), Positives = 83/249 (33%), Gaps = 69/249 (27%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           AC  G +  VK LL  G  V+  T +  + L  AC +G ++   +LL   A+V+      
Sbjct: 99  ACLGGHLSCVKILLKHGAQVNGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPE--SD 156

Query: 65  ECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE 124
             +P+ EAA  G              E +  L +                   N   +  
Sbjct: 157 LASPIHEAARRGH------------VECVNSLIA----------------YGGNIDHKIS 188

Query: 125 R---SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 181
                L  AC +     VKKLL  G                                 A+
Sbjct: 189 HLGTPLYLACENQQRACVKKLLESG---------------------------------AD 215

Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           V     KG+ +PL     +   E+  LL++ GAD   +++ G  P+         A +  
Sbjct: 216 VNQG--KGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVPPESPLAQL-F 272

Query: 242 LLECGANVE 250
           L   GA++ 
Sbjct: 273 LEREGASLP 281

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  236 bits (605), Expect = 2e-71
 Identities = 57/426 (13%), Positives = 119/426 (27%), Gaps = 80/426 (18%)

Query: 149 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRL 208
             ++ DE    + +A   G  +  + L+    +   +   G CT L  A   G ++  + 
Sbjct: 13  RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFG-CTALHLACKFGCVDTAKY 71

Query: 209 LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH 268
           L + G   +     G  P+  A       +V  L+E           G  P         
Sbjct: 72  LASVGEVHSLW--HGQKPIHLAVMANKTDLVVALVEGAKE------RGQMPESLLNECDE 123

Query: 269 VGVAKILLEYGAGINTHSNEFKESALTLACYKG--HLDMVRFLLSAGADQEHKTDEMHTA 326
             V +       G +   +   ++AL      G  +L+M++ L+  GA    K     T 
Sbjct: 124 REVNE------IGSHV-KHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETP 176

Query: 327 LMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGD 386
           LM A    + E   L++D+     S                                   
Sbjct: 177 LMRAMEFRNREALDLMMDTVPSKSSL---------------------------------- 202

Query: 387 VKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM 446
                        +     +G S L  A    + ++A   + M  +V     +    PL 
Sbjct: 203 ------------RLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHT-VPLY 249

Query: 447 EAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLA 506
            +  +              +       ++      + +L                 +  A
Sbjct: 250 LSVRAAMV----LLTKELLQKTDVFLIQACPYHNGTTVL--------PDRVVWLDFVPAA 297

Query: 507 CCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD 563
                 +V   L +    +       +   ++  ++    + R  L   A V  ++++  
Sbjct: 298 ADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRA 357

Query: 564 TALTYA 569
            +   +
Sbjct: 358 RSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  233 bits (598), Expect = 2e-70
 Identities = 63/475 (13%), Positives = 116/475 (24%), Gaps = 146/475 (30%)

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239
            N      +     +  AA  G  + VR LI  G     Q+  G T L  AC  G     
Sbjct: 11  LNRIKSDDEN-MEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTA 69

Query: 240 RVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACY 299
           + L   G        +G  P+  A  A    +   L+E             +   +L   
Sbjct: 70  KYLASVGEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAKERG-------QMPESLLNE 120

Query: 300 KGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDG--HVEVAKLLLDSGAQSVSAYARHD 357
               ++       G+  +H   +  TAL      G  ++E+ K+L+  GA          
Sbjct: 121 CDEREVNE----IGSHVKHCKGQ--TALHWCVGLGPEYLEMIKILVQLGA---------- 164

Query: 358 FFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA 417
                                                    S        E+ L  A   
Sbjct: 165 -----------------------------------------SPTAKDKADETPLMRAMEF 183

Query: 418 GYYELAQVLLAMH-----ANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPN 472
              E   +++          ++    +G  + L  A                        
Sbjct: 184 RNREALDLMMDTVPSKSSLRLDYANKQG-NSHLHWAILINW------------------- 223

Query: 473 DKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS- 530
                    ++  +  G  +N    E     L L+     + +   LL+      + A  
Sbjct: 224 ------EDVAMRFVEMGIDVNMEDNE-HTVPLYLSVRAAMVLLTKELLQKTDVFLIQACP 276

Query: 531 ---------------TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHT 575
                            +  AA     E+++ L +   +V     TG        +    
Sbjct: 277 YHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAP 336

Query: 576 DVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYA 630
            V  + L+  A                             V  ++++   +   +
Sbjct: 337 AVKRMKLAPSAP----------------------------VRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  211 bits (539), Expect = 4e-62
 Identities = 62/467 (13%), Positives = 110/467 (23%), Gaps = 135/467 (28%)

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKL 341
               S++     + +A  KG  D VR L+  G     +     TAL  A   G V+ AK 
Sbjct: 13  RIK-SDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKY 71

Query: 342 LLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVH 401
           L   G              +    +           +  A        V  L+       
Sbjct: 72  LASVGEV-----------HSLWHGQ------K---PIHLAVMANKTDLVVALVEGA---- 107

Query: 402 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESV 461
              + G+   SL       E+ ++     ++V+        T L      G         
Sbjct: 108 --KERGQMPESLLNECDEREVNEIG----SHVKH---CKGQTALHWCVGLGP-------- 150

Query: 462 SAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLL- 519
                            L+   IL+  GA   A  +   ET L  A      +  D ++ 
Sbjct: 151 ---------------EYLEMIKILVQLGASPTAKDKA-DETPLMRAMEFRNREALDLMMD 194

Query: 520 ----KNGANIELGA---STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACEN 572
               K+   ++      ++ L  A      ++    ++ G  V+ +       L  +   
Sbjct: 195 TVPSKSSLRLDYANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRA 254

Query: 573 GHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACE 632
               +   LL                      +         +V          +  A +
Sbjct: 255 AMVLLTKELLQKTDVF---------------LIQACPYHNGTTVLPDRVVWLDFVPAAAD 299

Query: 633 NGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSH 692
               +V  LL                                                  
Sbjct: 300 PSKQEVLQLLQEKLDE-------------------------------------------- 315

Query: 693 LCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANLRNRT 739
                    V     TG        +     V  + L+  A +R R+
Sbjct: 316 ---------VVRSLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRS 353

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  204 bits (521), Expect = 2e-59
 Identities = 57/362 (15%), Positives = 110/362 (30%), Gaps = 60/362 (16%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A   G    V++L+  G S       G + L LAC  G  + A+ L ++           
Sbjct: 27  AARKGQTDEVRRLIETGVSPTIQNRFGCTALHLACKFGCVDTAKYLASVGEVHSL---WH 83

Query: 65  ECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE 124
              P+  A  +    L            L          ++ A             P   
Sbjct: 84  GQKPIHLAVMANKTDLV---------VAL----------VEGAK-------ERGQMP--- 114

Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG--YYELAQVLLAMHANV 182
                     + +  +         H    +G++ L      G  Y E+ ++L+ + A+ 
Sbjct: 115 --ESLLNECDEREVNEIG------SHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASP 166

Query: 183 EDRGIKGECTPLMEAASSGFIEIVRLLIN-----HGADVNGQSSSGNTPLMYACAGGHEA 237
             +    E TPLM A      E + L+++         ++  +  GN+ L +A     E 
Sbjct: 167 TAKDKADE-TPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINWED 225

Query: 238 VVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFK------- 290
           V    +E G +V   +     PL  +  A  V + K LL+        +  +        
Sbjct: 226 VAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLP 285

Query: 291 -----ESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS 345
                   +  A      ++++ L     +     +      ++        V ++ L  
Sbjct: 286 DRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGGAVKRKKKAAPAVKRMKLAP 345

Query: 346 GA 347
            A
Sbjct: 346 SA 347

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  198 bits (506), Expect = 3e-57
 Identities = 60/446 (13%), Positives = 122/446 (27%), Gaps = 116/446 (26%)

Query: 24  VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATG 83
             ++ DE    + +A   G  +  + L+    +   +   G CT L  A   G       
Sbjct: 13  RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFG-CTALHLACKFGC------ 65

Query: 84  DGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERS-LVQACSDGDVKTVKKL 142
                  +  + L S                  E     + +  +  A        V  L
Sbjct: 66  ------VDTAKYLAS----------------VGEVHSLWHGQKPIHLAVMANKTDLVVAL 103

Query: 143 LTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG- 201
           +          + G+   SL       E+ ++     ++V+        T L      G 
Sbjct: 104 VEGA------KERGQMPESLLNECDEREVNEIG----SHVKH---CKGQTALHWCVGLGP 150

Query: 202 -FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC-----GANVEDHNEN 255
            ++E++++L+  GA    +  +  TPLM A    +   + ++++         ++  N+ 
Sbjct: 151 EYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQ 210

Query: 256 GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD 315
           G++ L  A       VA   +E G  +N   +      L L+     + + + LL     
Sbjct: 211 GNSHLHWAILINWEDVAMRFVEMGIDVNM-EDNEHTVPLYLSVRAAMVLLTKELLQKTDV 269

Query: 316 QEHKTDEMH-------------TALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPND 362
              +    H               +  A+     EV +LL +   +              
Sbjct: 270 FLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDE-------------- 315

Query: 363 KCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYEL 422
                                                V  + + G              +
Sbjct: 316 -------------------------------------VVRSLNTGAGGAVKRKKKAAPAV 338

Query: 423 AQVLLAMHANVEDRGIKGECTPLMEA 448
            ++ LA  A V  R           +
Sbjct: 339 KRMKLAPSAPVRTRSRSRA-RSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  166 bits (423), Expect = 7e-46
 Identities = 47/346 (13%), Positives = 91/346 (26%), Gaps = 62/346 (17%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           AC  G V T K L + G     +   G+  + LA  A   +L   L+             
Sbjct: 60  ACKFGCVDTAKYLASVGEVH--SLWHGQKPIHLAVMANKTDLVVALVEGAKER------- 110

Query: 65  ECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE 124
              P                                     E     + +++       +
Sbjct: 111 GQMPESLLNECDE---------------------------REVNEIGSHVKHCK----GQ 139

Query: 125 RSLVQACSDGD--VKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH--- 179
            +L      G   ++ +K L+  G S        E+ L  A      E   +++      
Sbjct: 140 TALHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSK 199

Query: 180 --ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA 237
               ++    +G  + L  A    + ++    +  G DVN + +    PL  +       
Sbjct: 200 SSLRLDYANKQG-NSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVL 258

Query: 238 VVRVLLECGANVEDHNE-------------NGHTPLMEAASAGHVGVAKILLEYGAGINT 284
           + + LL+                            +  AA      V ++L E    +  
Sbjct: 259 LTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVR 318

Query: 285 HSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEA 330
            S             K    + R  L+  A    ++     +   +
Sbjct: 319 -SLNTGAGGAVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major} Length = 364

 Score =  121 bits (305), Expect = 6e-30
 Identities = 38/277 (13%), Positives = 80/277 (28%), Gaps = 43/277 (15%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG--YYELAQVLLAMHANVED 59
                   + +  +         H    +G++ L      G  Y E+ ++L+ + A+   
Sbjct: 115 ESLLNECDEREVNEIG------SHVKHCKGQTALHWCVGLGPEYLEMIKILVQLGASPTA 168

Query: 60  RGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENP 119
           +    E TPLM A      +           +++      +     +++         + 
Sbjct: 169 KDKADE-TPLMRAMEFRNREAL---------DLM------MDTVPSKSSL------RLDY 206

Query: 120 RPQNER-SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM 178
             +     L  A          + +  G  V+   +E    L L+  A    L + LL  
Sbjct: 207 ANKQGNSHLHWAILINWEDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQK 266

Query: 179 HANVEDRGIKGE------------CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTP 226
                 +                    +  AA     E+++LL     +V    ++G   
Sbjct: 267 TDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQEVLQLLQEKLDEVVRSLNTGAGG 326

Query: 227 LMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEA 263
            +        AV R+ L   A V   + +       +
Sbjct: 327 AVKRKKKAAPAVKRMKLAPSAPVRTRSRSRARSSAVS 363

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  224 bits (574), Expect = 5e-68
 Identities = 84/295 (28%), Positives = 130/295 (44%), Gaps = 33/295 (11%)

Query: 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGA 214
           E   LL  A      +L Q LL   ANV  +  +G  TPL  A      +IV LL+ HGA
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 215 DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKI 274
           D   +  +G TP + A   G   ++++ L  GA+V + +  G T  MEAA  G V   K 
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123

Query: 275 LLEYGAGINTHSNEFKE---------SALTLACYKGHLDMVRFLLS-AGADQEHKTDEMH 324
           L + GA +N      ++         +AL  A  KGH+++++ LL   GAD     +   
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183

Query: 325 TALMEASMDGHV----EVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQ 380
            AL+ A +         +  LLLD GA             N + ER      T    L+ 
Sbjct: 184 NALIHALLSSDDSDVEAITHLLLDHGAD-----------VNVRGER----GKT---PLIL 225

Query: 381 ACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 434
           A     +  V++LL  E   +++T  +G++ L LA      ++A++L    A+ +
Sbjct: 226 AVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  205 bits (524), Expect = 7e-61
 Identities = 74/343 (21%), Positives = 111/343 (32%), Gaps = 72/343 (20%)

Query: 223 GNTPLMYACAGGHEAVVRVLLECGANVEDH-NENGHTPLMEAASAGHVGVAKILLEYGAG 281
            N  L+ A       +V+ LLE GANV     E G TPL  A       + ++LL +GA 
Sbjct: 5   DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGAD 64

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKL 341
                 +   +   LA   G + +++  LS GAD         TA MEA++ G V+  K 
Sbjct: 65  PV-LRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123

Query: 342 LLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVH 401
           L   GA             N + +                                    
Sbjct: 124 LYKRGAN-----------VNLRRK------------------------------TKEDQE 142

Query: 402 ETTDEGESLLSLACSAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAASSGRQCNLNES 460
                G + L  A   G+ E+ ++LL    A+V      G    L+ A  S    ++   
Sbjct: 143 RLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR-NALIHALLSSDDSDVEAI 201

Query: 461 VSAYARHDFFPNDKSVNGLQASVILI-PGAKINAHTEETQETALTLACCGGFLDVADFLL 519
                                  +L+  GA +N    E  +T L LA     L +   LL
Sbjct: 202 TH---------------------LLLDHGADVNV-RGERGKTPLILAVEKKHLGLVQRLL 239

Query: 520 -KNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAK 558
            +    I    S   T L+ A +    ++   L   GA     
Sbjct: 240 EQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  201 bits (514), Expect = 2e-59
 Identities = 77/407 (18%), Positives = 113/407 (27%), Gaps = 137/407 (33%)

Query: 253 NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312
               +  L++A     V + + LLE GA +N    E   + L  A      D+V  LL  
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 313 GADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISY 372
           GAD   +     T  + A++ G V++ KL L  GA                         
Sbjct: 62  GADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGAD------------------------ 97

Query: 373 TYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 432
                                      V+E    G +    A   G  +  + L    AN
Sbjct: 98  ---------------------------VNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 130

Query: 433 VEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKIN 492
           V                                      N +         +   G    
Sbjct: 131 V--------------------------------------NLRRKTKEDQERLRKGG---- 148

Query: 493 AHTEETQETALTLACCGGFLDVADFLL-KNGANIELGA---STPLMEAAQEGH----LEL 544
                   TAL  A   G ++V   LL + GA++          L+ A           +
Sbjct: 149 -------ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAI 201

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLS-YGANLDNSTMLIEAAKGGHA 603
              LLD GA V+ + + G T L  A E  H  +   LL                      
Sbjct: 202 THLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIE---------------- 245

Query: 604 NVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
                       ++     G TAL  A E     +A+LL   GA+ D
Sbjct: 246 ------------INDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  199 bits (509), Expect = 1e-58
 Identities = 67/234 (28%), Positives = 102/234 (43%), Gaps = 18/234 (7%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           A        V+ LL  G         G +   LA  AG  +L ++ L+  A+V +    G
Sbjct: 46  AVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYG 105

Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVN----------GQSSSGNTPLMYACAGGHEAVV 239
             T  MEAA  G ++ ++ L   GA+VN               G T LM A   GH  V+
Sbjct: 106 F-TAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVL 164

Query: 240 RVLL-ECGANVEDHNENGHTPLMEAASAGHVG----VAKILLEYGAGINTHSNEFKESAL 294
           ++LL E GA+V   +  G   L+ A  +        +  +LL++GA +N    E  ++ L
Sbjct: 165 KILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVN-VRGERGKTPL 223

Query: 295 TLACYKGHLDMVRFLLS-AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
            LA  K HL +V+ LL     +      +  TAL+ A      ++A+LL   GA
Sbjct: 224 ILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGA 277

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  194 bits (497), Expect = 5e-57
 Identities = 81/355 (22%), Positives = 118/355 (33%), Gaps = 106/355 (29%)

Query: 406 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYA 465
           E   LL  A      +L Q LL   ANV  +  +G  TPL  A    R            
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSR------------ 51

Query: 466 RHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGAN 524
                             +L+  GA      +    T   LA   G + +    L  GA+
Sbjct: 52  -------------EDIVELLLRHGADPVLRKKN-GATPFLLAAIAGSVKLLKLFLSKGAD 97

Query: 525 IELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAK----------TQTGDTALTYACE 571
           +        T  MEAA  G ++ +++L   GA V+ +           + G TAL  A E
Sbjct: 98  VNECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAE 157

Query: 572 NGHTDVADLLLS-YGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYA 630
            GH +V  +LL   GA+                            V+A    G  AL +A
Sbjct: 158 KGHVEVLKILLDEMGAD----------------------------VNACDNMGRNALIHA 189

Query: 631 CENGHTD----VADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGS 681
             +        +  LLL +GA++        T LI A +  H  +VQ LL+         
Sbjct: 190 LLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLE--------- 240

Query: 682 LSSPSDDSSSHLCSQGKKSG--VHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                            +    ++     G TAL  A E     +A+LL   GA+
Sbjct: 241 -----------------QEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGAS 278

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  187 bits (478), Expect = 2e-54
 Identities = 71/238 (29%), Positives = 110/238 (46%), Gaps = 19/238 (7%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDR 185
           L++A  + DV  V++LL  G +V+   +E G + L  A      ++ ++LL   A+   R
Sbjct: 9   LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 68

Query: 186 GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245
              G  TP + AA +G +++++L ++ GADVN     G T  M A   G    ++ L + 
Sbjct: 69  KKNG-ATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLYKR 127

Query: 246 GANVEDHNEN----------GHTPLMEAASAGHVGVAKILL-EYGAGINTHSNEFKESAL 294
           GANV    +           G T LM+AA  GHV V KILL E GA +N   +    +AL
Sbjct: 128 GANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVN-ACDNMGRNAL 186

Query: 295 TLACYKGH----LDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS-GA 347
             A           +   LL  GAD   + +   T L+ A    H+ + + LL+    
Sbjct: 187 IHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHI 244

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  158 bits (401), Expect = 1e-43
 Identities = 82/326 (25%), Positives = 130/326 (39%), Gaps = 68/326 (20%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDR 60
           L++A  + DV  V++LL  G +V+   +E G + L  A      ++ ++LL   A+   R
Sbjct: 9   LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 68

Query: 61  GIKGECTPLMEAASSGFGKLATGDGKL-----ADPEVLRRLTSSVSCALDEAAAALTRMR 115
              G  TP + AA +G  KL     KL     AD                          
Sbjct: 69  KKNG-ATPFLLAAIAGSVKLL----KLFLSKGADVNE----------------------C 101

Query: 116 NENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVL 175
           +         + ++A   G VK +K L   G +V+                         
Sbjct: 102 DFY----GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTK------------------- 138

Query: 176 LAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH-GADVNGQSSSGNTPLMYACAGG 234
                + E     G  T LM+AA  G +E++++L++  GADVN   + G   L++A    
Sbjct: 139 ----EDQERLRKGG-ATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIHALLSS 193

Query: 235 H----EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE-YGAGINTHSNEF 289
                EA+  +LL+ GA+V    E G TPL+ A    H+G+ + LLE     IN  ++  
Sbjct: 194 DDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEIN-DTDSD 252

Query: 290 KESALTLACYKGHLDMVRFLLSAGAD 315
            ++AL LA       +   L   GA 
Sbjct: 253 GKTALLLAVELKLKKIAELLCKRGAS 278

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  148 bits (377), Expect = 3e-40
 Identities = 69/285 (24%), Positives = 104/285 (36%), Gaps = 56/285 (19%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A        V+ LL  G         G +   LA  AG  +L ++ L+  A+V +    G
Sbjct: 46  AVQMSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYG 105

Query: 65  ECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE 124
             T  MEAA  G              + L+ L                  R  N    N 
Sbjct: 106 F-TAFMEAAVYGK------------VKALKFLYK----------------RGANV---NL 133

Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH-ANVE 183
           R           +  ++L   G +           L  A   G+ E+ ++LL    A+V 
Sbjct: 134 R-------RKTKEDQERLRKGGATA----------LMDAAEKGHVEVLKILLDEMGADVN 176

Query: 184 DRGIKGECTPLMEAASSG----FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239
                G    L+ A  S        I  LL++HGADVN +   G TPL+ A    H  +V
Sbjct: 177 ACDNMGR-NALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLV 235

Query: 240 RVLLE-CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGIN 283
           + LLE     + D + +G T L+ A       +A++L + GA  +
Sbjct: 236 QRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1 Length = 285

 Score =  126 bits (319), Expect = 2e-32
 Identities = 41/213 (19%), Positives = 62/213 (29%), Gaps = 84/213 (39%)

Query: 523 ANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKT-QTGDTALTYACENGHTDVADLL 581
           A +E   +  L++A Q   ++LV+ LL+ GA V+ +  + G T L  A +    D+ +LL
Sbjct: 1   AAVE--DNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELL 58

Query: 582 LSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADL 641
           L +GA+                               + + G T    A   G   +  L
Sbjct: 59  LRHGAD----------------------------PVLRKKNGATPFLLAAIAGSVKLLKL 90

Query: 642 LLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSG 701
            LS GA+                                                     
Sbjct: 91  FLSKGAD----------------------------------------------------- 97

Query: 702 VHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
           V+     G TA   A   G       L   GAN
Sbjct: 98  VNECDFYGFTAFMEAAVYGKVKALKFLYKRGAN 130

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  216 bits (552), Expect = 2e-65
 Identities = 60/222 (27%), Positives = 104/222 (46%), Gaps = 1/222 (0%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           +V+A   G  +  ++L+  G  V +   E  +LL  A      +L +  ++  A V+  G
Sbjct: 13  IVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG 72

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
                TPL  A   G + +V  L+ +GAD +     G + +  A   GH ++V  L+  G
Sbjct: 73  GDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKG 132

Query: 247 ANVEDHNENGHTPLMEAASAGH-VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM 305
            +V+  ++NG TPLM AA   H V   ++LL +   +N      K +AL  A   G+  +
Sbjct: 133 QDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTV 192

Query: 306 VRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           +  LL AGA+ + +  +  +AL  A    +V +   L ++  
Sbjct: 193 ISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  192 bits (490), Expect = 1e-56
 Identities = 56/260 (21%), Positives = 98/260 (37%), Gaps = 42/260 (16%)

Query: 491 INAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRY 547
           +    ++     +  A   G  +    L++ G ++        T L  AA    ++LV+Y
Sbjct: 2   MTH-IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKY 60

Query: 548 LLDSGAQVHAKTQ-TGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGG 601
            +  GA V         T L +A   GH  +   L+ YGA+      +  + +  AA+ G
Sbjct: 61  YISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFG 120

Query: 602 HANVVQLLLDFPRSVHAKTQTGDTALTYACENGHT-DVADLLLSYGANL------DNSTM 654
           H ++V  L+   + V    Q G T L +A    H+ D   LLL++  ++        +T 
Sbjct: 121 HTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTA 180

Query: 655 LIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALT 714
           L  A   G+  V+ LLL                         G  + V A+   G++AL 
Sbjct: 181 LHWAVLAGNTTVISLLL-----------------------EAG--ANVDAQNIKGESALD 215

Query: 715 YACENGHTDVADLLLSYGAN 734
            A +  +  + + L      
Sbjct: 216 LAKQRKNVWMINHLQEARQA 235

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  189 bits (484), Expect = 9e-56
 Identities = 59/257 (22%), Positives = 91/257 (35%), Gaps = 21/257 (8%)

Query: 181 NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR 240
           ++           +++A   G  E  R L+  G DV        T L +A       +V+
Sbjct: 1   HMTHIDDYS-TWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVK 59

Query: 241 VLLECGANVED-HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACY 299
             +  GA V+    +   TPL  A   GH+ +   L++YGA  +    E   S + LA  
Sbjct: 60  YYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGE-GCSCIHLAAQ 118

Query: 300 KGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGH-VEVAKLLLDSGAQSVSAYARHDF 358
            GH  +V +L++ G D +       T LM A+   H V+  +LLL               
Sbjct: 119 FGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNV----------- 167

Query: 359 FPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG 418
                         T   +L  A   G+   +  LL  G +V     +GES L LA    
Sbjct: 168 ---SVNLGDKYHKNT---ALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRK 221

Query: 419 YYELAQVLLAMHANVED 435
              +   L         
Sbjct: 222 NVWMINHLQEARQAKGY 238

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  179 bits (458), Expect = 4e-52
 Identities = 56/345 (16%), Positives = 100/345 (28%), Gaps = 115/345 (33%)

Query: 248 NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVR 307
           ++   ++     +++A   G     + L+E G  +     E   + L  A     +D+V+
Sbjct: 1   HMTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKE-NVTLLHWAAINNRIDLVK 59

Query: 308 FLLSAGADQEHKT-DEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCER 366
           + +S GA  +    D   T L  A+  GH+ +   L+  GA                   
Sbjct: 60  YYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGAD------------------ 101

Query: 367 PSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVL 426
                                                  EG S + LA   G+  +   L
Sbjct: 102 ---------------------------------PSLIDGEGCSCIHLAAQFGHTSIVAYL 128

Query: 427 LAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILI 486
           +A   +V+     G  TPLM AA                                     
Sbjct: 129 IAKGQDVDMMDQNGM-TPLMWAAYRT---------------------------------- 153

Query: 487 PGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIE----LGASTPLMEAAQEGHL 542
                  H+ +                    LL    ++        +T L  A   G+ 
Sbjct: 154 -------HSVDP----------------TRLLLTFNVSVNLGDKYHKNTALHWAVLAGNT 190

Query: 543 ELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
            ++  LL++GA V A+   G++AL  A +  +  + + L      
Sbjct: 191 TVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA 235

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  175 bits (446), Expect = 2e-50
 Identities = 61/258 (23%), Positives = 96/258 (37%), Gaps = 37/258 (14%)

Query: 402 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESV 461
              D     +  A   G YE  + L+    +V     +   T L  AA + R     + V
Sbjct: 4   HIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKEN-VTLLHWAAINNRI----DLV 58

Query: 462 SAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLK 520
                                   I  GA ++    +   T L  A   G L +   L+K
Sbjct: 59  K---------------------YYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMK 97

Query: 521 NGANIELGA---STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHT-D 576
            GA+  L      + +  AAQ GH  +V YL+  G  V    Q G T L +A    H+ D
Sbjct: 98  YGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVD 157

Query: 577 VADLLLSYGANL------DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYA 630
              LLL++  ++        +T L  A   G+  V+ LLL+   +V A+   G++AL  A
Sbjct: 158 PTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLA 217

Query: 631 CENGHTDVADLLLSYGAN 648
            +  +  + + L      
Sbjct: 218 KQRKNVWMINHLQEARQA 235

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  167 bits (427), Expect = 1e-47
 Identities = 54/239 (22%), Positives = 86/239 (35%), Gaps = 21/239 (8%)

Query: 216 VNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
           +          ++ A   G     R L+E G +V   ++   T L  AA    + + K  
Sbjct: 2   MTHIDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYY 61

Query: 276 LEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGH 335
           +  GA ++    +   + L  A  +GHL MV  L+  GAD      E  + +  A+  GH
Sbjct: 62  ISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGH 121

Query: 336 VEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVK-TVKKLL 394
             +   L+  G              +   +       T    L+ A          + LL
Sbjct: 122 TSIVAYLIAKGQD-----------VDMMDQN----GMT---PLMWAAYRTHSVDPTRLLL 163

Query: 395 TEGRSVHETTD-EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 452
           T   SV+        + L  A  AG   +  +LL   ANV+ + IKGE + L  A    
Sbjct: 164 TFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGE-SALDLAKQRK 221

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  167 bits (426), Expect = 1e-47
 Identities = 55/193 (28%), Positives = 86/193 (44%), Gaps = 5/193 (2%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETT-DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK 188
           A  +  +  VK  +++G  V +   D   + L  A   G+  +   L+   A+      +
Sbjct: 49  AAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGE 108

Query: 189 GECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA-VVRVLLECGA 247
           G C+ +  AA  G   IV  LI  G DV+    +G TPLM+A    H     R+LL    
Sbjct: 109 G-CSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLTFNV 167

Query: 248 NVEDH-NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
           +V      + +T L  A  AG+  V  +LLE GA ++   N   ESAL LA  + ++ M+
Sbjct: 168 SVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDA-QNIKGESALDLAKQRKNVWMI 226

Query: 307 RFLLSAGADQEHK 319
             L  A   + + 
Sbjct: 227 NHLQEARQAKGYD 239

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score =  134 bits (339), Expect = 1e-35
 Identities = 60/286 (20%), Positives = 91/286 (31%), Gaps = 71/286 (24%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           +V+A   G  +  ++L+  G  V +   E  +LL  A      +L +  ++  A V+  G
Sbjct: 13  IVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLG 72

Query: 62  IKGECTPLMEAASSGFGKLATGDGKL-----ADPEVLRRLTSSVSCALDEAAAALTRMRN 116
                TPL  A   G   +            ADP +                       +
Sbjct: 73  GDLNSTPLHWATRQGHLSMV----VQLMKYGADPSL----------------------ID 106

Query: 117 ENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 176
                     +  A   G    V  L+ +G+ V      G                    
Sbjct: 107 GE----GCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGM------------------- 143

Query: 177 AMHANVEDRGIKGECTPLMEAASSGF-IEIVRLLINHGADVNGQSSS-GNTPLMYACAGG 234
                          TPLM AA     ++  RLL+     VN       NT L +A   G
Sbjct: 144 ---------------TPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAG 188

Query: 235 HEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280
           +  V+ +LLE GANV+  N  G + L  A    +V +   L E   
Sbjct: 189 NTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQ 234

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens} Length = 240

 Score = 78.2 bits (194), Expect = 2e-16
 Identities = 42/221 (19%), Positives = 72/221 (32%), Gaps = 40/221 (18%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETT-DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK 63
           A  +  +  VK  +++G  V +   D   + L  A   G+  +   L+   A+      +
Sbjct: 49  AAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWATRQGHLSMVVQLMKYGADPSLIDGE 108

Query: 64  GECTPLMEAASSGFGKLATGDGKL-----ADPEVLRRLTSSVSCALDEAAAALTRMRNEN 118
           G C+ +  AA  G   +             D +                      M ++N
Sbjct: 109 G-CSCIHLAAQFGHTSIV----AYLIAKGQDVD----------------------MMDQN 141

Query: 119 PRPQNERSLVQACSDGDVK-TVKKLLTEGRSVHETTD-EGESLLSLACSAGYYELAQVLL 176
                   L+ A          + LLT   SV+        + L  A  AG   +  +LL
Sbjct: 142 ----GMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTVISLLL 197

Query: 177 AMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVN 217
              ANV+ + IKGE + L  A     + ++  L        
Sbjct: 198 EAGANVDAQNIKGE-SALDLAKQRKNVWMINHLQEARQAKG 237

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  212 bits (543), Expect = 2e-62
 Identities = 70/430 (16%), Positives = 128/430 (29%), Gaps = 109/430 (25%)

Query: 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVL 242
             + I      L+EA+  G+I+  R  + H             P       G++ +    
Sbjct: 30  NHQSITSSQHSLLEASYDGYIKRQRNELQHY---------SLYPNPQGYGNGNDFLGDFN 80

Query: 243 LECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGH 302
                   +        L   A+ G   + + +      I         + L        
Sbjct: 81  HTNLQIPTEPEPESPIKLHTEAA-GSYAITEPITRESVNIID--PRHNRTVLHWIASNSS 137

Query: 303 LDMVRFLL--------SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYA 354
            +    L+        +AGAD      + +T LM A +     +   L            
Sbjct: 138 AEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYL------------ 185

Query: 355 RHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLA 414
                                                  +  G           S L  A
Sbjct: 186 ---------------------------------------MKAGADPTIYNKSERSALHQA 206

Query: 415 CSAGYYELAQVLL---AMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFP 471
            +   + +   +L    +  ++E+    G  T LM  A +  +                 
Sbjct: 207 AANRDFGMMVYMLNSTKLKGDIEELDRNGM-TALMIVAHNEGR----------------- 248

Query: 472 NDKSVNGLQASVILIP-GAKINAHTEETQE-------TALTLACCGGFLDVADFLL-KNG 522
                + + ++ +L+  GAK++      ++       TAL  A     + +  +L+ + G
Sbjct: 249 -----DQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKG 303

Query: 523 ANIELG---ASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVAD 579
           +N +       TP+M AAQEG +E+V YL+  GA V A   T  TA   A  N H ++ D
Sbjct: 304 SNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVD 363

Query: 580 LLLSYGANLD 589
           +        +
Sbjct: 364 IFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  209 bits (533), Expect = 4e-61
 Identities = 67/478 (14%), Positives = 120/478 (25%), Gaps = 141/478 (29%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
            P ME                    +   +S    L+ A   G+    R       N   
Sbjct: 18  MPPMENEEKN------------RKNHQSITSSQHSLLEASYDGYIKRQR-------NELQ 58

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
           H      P  +    G+  +                      L      G   +   +  
Sbjct: 59  HY--SLYPNPQGYGNGNDFLGDFNHTNLQIPTE-PEPESPIKLHTEA-AGSYAITEPITR 114

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSIS 371
              +         T L   + +   E ++ L+   A                        
Sbjct: 115 ESVN-IIDPRHNRTVLHWIASNSSAEKSEDLIVHEA------------------------ 149

Query: 372 YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 431
                              K+ +  G  V+    +  + L LA  A    L   L+   A
Sbjct: 150 -------------------KECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGA 190

Query: 432 NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILI----P 487
           +          + L +AA++         +                       ++     
Sbjct: 191 DPTIYNKSE-RSALHQAAANRDF----GMMV---------------------YMLNSTKL 224

Query: 488 GAKINAHTEETQETALTLACCGGFLD---VADFLLKNGANIELGAS-----------TPL 533
              I         TAL +       D    A  L++ GA ++   +           T L
Sbjct: 225 KGDIEELDRN-GMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTAL 283

Query: 534 MEAAQEGHLELVRYLL-DSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNST 592
             AAQ  ++ +V+YL+ + G+    + + G T +  A + G  +V   L+  GA+     
Sbjct: 284 HYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGAS----- 338

Query: 593 MLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
                                  V A   T  TA   A  N H ++ D+        +
Sbjct: 339 -----------------------VEAVDATDHTARQLAQANNHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  196 bits (501), Expect = 1e-56
 Identities = 82/437 (18%), Positives = 134/437 (30%), Gaps = 107/437 (24%)

Query: 313 GADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISY 372
                        +L+EAS DG+++  +  L   +                         
Sbjct: 27  NRKNHQSITSSQHSLLEASYDGYIKRQRNELQHYSLY----------------------- 63

Query: 373 TYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 432
                  Q   +G+        T  +   E   E    L    +AG Y + + +     N
Sbjct: 64  ----PNPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTE-AAGSYAITEPITRESVN 118

Query: 433 VEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKIN 492
           + D   +   T L   AS+       E       H+            A   +  GA +N
Sbjct: 119 IIDP--RHNRTVLHWIASNSSA----EKSEDLIVHE------------AKECIAAGADVN 160

Query: 493 AHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVRYLL 549
           A  +  + T L LA       +  +L+K GA+  +      + L +AA      ++ Y+L
Sbjct: 161 A-MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYML 219

Query: 550 D---SGAQVHAKTQTGDTALTYACENGHTD---VADLLLSYGANLDNSTMLIEAAKGGHA 603
           +       +    + G TAL     N   D    A LL+  GA +D              
Sbjct: 220 NSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDG----------- 268

Query: 604 NVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLS-YGANL-----DNSTMLIE 657
                         ++   G TAL YA +  +  +   L+   G+N      D  T ++ 
Sbjct: 269 ---------AARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIML 319

Query: 658 AAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYAC 717
           AA+ G   VV  L+                        QG  + V A   T  TA   A 
Sbjct: 320 AAQEGRIEVVMYLI-----------------------QQG--ASVEAVDATDHTARQLAQ 354

Query: 718 ENGHTDVADLLLSYGAN 734
            N H ++ D+       
Sbjct: 355 ANNHHNIVDIFDRCRPE 371

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  185 bits (471), Expect = 2e-52
 Identities = 66/371 (17%), Positives = 120/371 (32%), Gaps = 62/371 (16%)

Query: 1   SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 60
           SL++A  DG +K  +         +E               G   L            + 
Sbjct: 40  SLLEASYDGYIKRQR---------NELQHYSLYPNPQGYGNGNDFLGDFNHTNLQIPTEP 90

Query: 61  GIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPR 120
             +     L   A+        G   +   E +            E+        N    
Sbjct: 91  EPES-PIKLHTEAA--------GSYAIT--EPI----------TRESV-------NIIDP 122

Query: 121 PQNERSLVQACSDGDVKTVKKLLTE--------GRSVHETTDEGESLLSLACSAGYYELA 172
             N   L    S+   +  + L+          G  V+    +  + L LA  A    L 
Sbjct: 123 RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRLV 182

Query: 173 QVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH---GADVNGQSSSGNTPLMY 229
             L+   A+          + L +AA++    ++  ++N      D+     +G T LM 
Sbjct: 183 AYLMKAGADPTIYNKSE-RSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMI 241

Query: 230 ACAGGHE---AVVRVLLECGANV--------EDHNENGHTPLMEAASAGHVGVAKILL-E 277
                     A  ++L+E GA V        +     G T L  AA   ++ + K L+ E
Sbjct: 242 VAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGE 301

Query: 278 YGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVE 337
            G+  +   +E  ++ + LA  +G +++V +L+  GA  E      HTA   A  + H  
Sbjct: 302 KGSNKDK-QDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHN 360

Query: 338 VAKLLLDSGAQ 348
           +  +      +
Sbjct: 361 IVDIFDRCRPE 371

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  182 bits (464), Expect = 2e-51
 Identities = 67/331 (20%), Positives = 121/331 (36%), Gaps = 45/331 (13%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
             Q   +G+        T  +   E   E    L    +AG Y + + +     N+ D  
Sbjct: 65  NPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTE-AAGSYAITEPITRESVNIIDP- 122

Query: 187 IKGECTPLMEAASSGFIEIVRLLINH--------GADVNGQSSSGNTPLMYACAGGHEAV 238
            +   T L   AS+   E    LI H        GADVN      NTPLM A       +
Sbjct: 123 -RHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLMLAVLARRRRL 181

Query: 239 VRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE---YGAGINTHSNEFKESALT 295
           V  L++ GA+   +N++  + L +AA+    G+   +L        I    +    +AL 
Sbjct: 182 VAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEE-LDRNGMTALM 240

Query: 296 LACYKGHLDMV---RFLLSAGAD--------QEHKTDEMHTALMEASMDGHVEVAKLLL- 343
           +  +    D V   + L+  GA         ++ +  +  TAL  A+   ++ + K L+ 
Sbjct: 241 IVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVG 300

Query: 344 DSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHET 403
           + G+             + + E       T    ++ A  +G ++ V  L+ +G SV   
Sbjct: 301 EKGSN-----------KDKQDED----GKT---PIMLAAQEGRIEVVMYLIQQGASVEAV 342

Query: 404 TDEGESLLSLACSAGYYELAQVLLAMHANVE 434
                +   LA +  ++ +  +        E
Sbjct: 343 DATDHTARQLAQANNHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score =  176 bits (448), Expect = 4e-49
 Identities = 69/332 (20%), Positives = 120/332 (36%), Gaps = 39/332 (11%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
             Q   +G+        T  +   E   E    L    +AG Y + + +     N+ D  
Sbjct: 65  NPQGYGNGNDFLGDFNHTNLQIPTEPEPESPIKLHTE-AAGSYAITEPITRESVNIIDP- 122

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
            +   T L   AS+               E    L    +     A A      + N   
Sbjct: 123 -RHNRTVLHWIASNS------------SAEKSEDLIVHEAKECIAAGA------DVNAMD 163

Query: 122 QNERS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL---A 177
            +E + L+ A      + V  L+  G           S L  A +   + +   +L    
Sbjct: 164 CDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTK 223

Query: 178 MHANVEDRGIKGECTPLMEAASSG---FIEIVRLLINHGADVNGQSSS--------GNTP 226
           +  ++E+    G  T LM  A +     +   +LL+  GA V+   ++        G T 
Sbjct: 224 LKGDIEELDRNGM-TALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTA 282

Query: 227 LMYACAGGHEAVVRVLL-ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTH 285
           L YA    +  +V+ L+ E G+N +  +E+G TP+M AA  G + V   L++ GA +   
Sbjct: 283 LHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEA- 341

Query: 286 SNEFKESALTLACYKGHLDMVRFLLSAGADQE 317
            +    +A  LA    H ++V        ++E
Sbjct: 342 VDATDHTARQLAQANNHHNIVDIFDRCRPERE 373

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1 Length = 373

 Score = 75.8 bits (187), Expect = 9e-15
 Identities = 16/155 (10%), Positives = 38/155 (24%), Gaps = 41/155 (26%)

Query: 586 ANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
           +   +   L+EA+  G+    +  L                      NG+  + D   + 
Sbjct: 33  SITSSQHSLLEASYDGYIKRQRNELQ---------HYSLYPNPQGYGNGNDFLGDFNHTN 83

Query: 646 GANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKS 700
                    ++   L   A G    + + +                         +    
Sbjct: 84  LQIPTEPEPESPIKLHTEAAG-SYAITEPIT-----------------------RESVNI 119

Query: 701 GVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
                 +   T L +   N   + ++ L+ + A  
Sbjct: 120 ---IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 151

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  199 bits (509), Expect = 3e-59
 Identities = 60/219 (27%), Positives = 102/219 (46%), Gaps = 3/219 (1%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           A   G V     L+  G ++   +++  + L  A    + E  + L+   A V+ +  +G
Sbjct: 18  AAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEG 77

Query: 190 ECTPLMEAASSGFIEIVRLLINHGA-DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN 248
             T L  AA  G  E+V+ L+++G  DVN Q   G TP+++A    H  +V++LL  G++
Sbjct: 78  -STCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSD 136

Query: 249 VEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRF 308
           +   +   +  L  AA +G V +A+ILL     ++   N   +S L +A  +   D V  
Sbjct: 137 INIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHA-VNIHGDSPLHIAARENRYDCVVL 195

Query: 309 LLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
            LS  +D   K  E  T L  AS++  V  A  +  +  
Sbjct: 196 FLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  197 bits (503), Expect = 2e-58
 Identities = 69/258 (26%), Positives = 109/258 (42%), Gaps = 40/258 (15%)

Query: 491 INAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVRY 547
                +  + + L  A   G +D+   L++ GANI+  +    TPLMEAA+  HLE V+Y
Sbjct: 4   FKMEHQN-KRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKY 62

Query: 548 LLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA------NLDNSTMLIEAAKGG 601
           L+ +GA V  K   G T L  A + GH +V   LLS G       +    T +I A +  
Sbjct: 63  LIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK 122

Query: 602 HANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLI 656
           H ++V+LLL     ++ +    +  L +A  +G  D+A++LL+   +L        + L 
Sbjct: 123 HVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLH 182

Query: 657 EAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYA 716
            AA+    + V L L                       S+   S V  K + G+T L  A
Sbjct: 183 IAARENRYDCVVLFL-----------------------SRD--SDVTLKNKEGETPLQCA 217

Query: 717 CENGHTDVADLLLSYGAN 734
             N     A  +     +
Sbjct: 218 SLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  191 bits (488), Expect = 2e-56
 Identities = 58/200 (29%), Positives = 92/200 (46%), Gaps = 3/200 (1%)

Query: 149 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRL 208
                    S L  A  AG+ ++  +L+   AN++        TPLMEAA +  +E V+ 
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQ-RTPLMEAAENNHLEAVKY 62

Query: 209 LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NVEDHNENGHTPLMEAASAG 267
           LI  GA V+ + + G+T L  A   GH  VV+ LL  G  +V   ++ G TP++ A    
Sbjct: 63  LIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYK 122

Query: 268 HVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTAL 327
           HV + K+LL  G+ IN   +  +   L  A + G +D+   LL+A  D         + L
Sbjct: 123 HVDLVKLLLSKGSDINI-RDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPL 181

Query: 328 MEASMDGHVEVAKLLLDSGA 347
             A+ +   +   L L   +
Sbjct: 182 HIAARENRYDCVVLFLSRDS 201

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  191 bits (488), Expect = 2e-56
 Identities = 63/255 (24%), Positives = 105/255 (41%), Gaps = 21/255 (8%)

Query: 179 HANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAV 238
           H N +        +PL  AA +G ++I  +L+  GA+++  S    TPLM A    H   
Sbjct: 1   HMNFKMEHQNK-RSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEA 59

Query: 239 VRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG-INTHSNEFKESALTLA 297
           V+ L++ GA V+  +  G T L  AA  GH  V + LL  G   +N   ++   + +  A
Sbjct: 60  VKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNC-QDDGGWTPMIWA 118

Query: 298 CYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHD 357
               H+D+V+ LLS G+D   + +E +  L  A+  G V++A++LL +            
Sbjct: 119 TEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCD--------- 169

Query: 358 FFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA 417
              +      +    +    L  A  +     V   L+    V     EGE+ L  A   
Sbjct: 170 --LHAV----NIHGDS---PLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLN 220

Query: 418 GYYELAQVLLAMHAN 432
                A  +     +
Sbjct: 221 SQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  169 bits (431), Expect = 2e-48
 Identities = 63/259 (24%), Positives = 103/259 (39%), Gaps = 37/259 (14%)

Query: 400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNE 459
                    S L  A  AG+ ++  +L+   AN++        TPLMEAA +        
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQ-RTPLMEAAENNH------ 56

Query: 460 SVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFL 518
                              L+A   LI  GA ++    E   T L LA   G  +V  +L
Sbjct: 57  -------------------LEAVKYLIKAGALVDPKDAE-GSTCLHLAAKKGHYEVVQYL 96

Query: 519 LKNGA-NIELGA---STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGH 574
           L NG  ++        TP++ A +  H++LV+ LL  G+ ++ +    +  L +A  +G 
Sbjct: 97  LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGC 156

Query: 575 TDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTY 629
            D+A++LL+   +L        + L  AA+    + V L L     V  K + G+T L  
Sbjct: 157 VDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQC 216

Query: 630 ACENGHTDVADLLLSYGAN 648
           A  N     A  +     +
Sbjct: 217 ASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  168 bits (429), Expect = 5e-48
 Identities = 47/188 (25%), Positives = 83/188 (44%), Gaps = 3/188 (1%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIK 188
           A  +  ++ VK L+  G  V     EG + L LA   G+YE+ Q LL+    +V  +   
Sbjct: 51  AAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDG 110

Query: 189 GECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN 248
           G  TP++ A     +++V+LL++ G+D+N + +  N  L +A   G   +  +LL    +
Sbjct: 111 GW-TPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCD 169

Query: 249 VEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRF 308
           +   N +G +PL  AA         + L   + +    N+  E+ L  A     +     
Sbjct: 170 LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVT-LKNKEGETPLQCASLNSQVWSALQ 228

Query: 309 LLSAGADQ 316
           +  A  D 
Sbjct: 229 MSKALQDS 236

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  160 bits (408), Expect = 4e-45
 Identities = 67/306 (21%), Positives = 108/306 (35%), Gaps = 83/306 (27%)

Query: 287 NEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSG 346
           ++ K S L  A   GH+D+   L+ AGA+ +  +++  T LMEA+ + H+E  K L+ +G
Sbjct: 8   HQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAG 67

Query: 347 AQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDE 406
           A                                                    V     E
Sbjct: 68  A---------------------------------------------------LVDPKDAE 76

Query: 407 GESLLSLACSAGYYELAQVLLAMHA-NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYA 465
           G + L LA   G+YE+ Q LL+    +V  +   G  TP++ A          + V    
Sbjct: 77  GSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGW-TPMIWATEYKHV----DLVK--- 128

Query: 466 RHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGAN 524
                             +L+  G+ IN    E +   L  A   G +D+A+ LL    +
Sbjct: 129 ------------------LLLSKGSDINIRDNE-ENICLHWAAFSGCVDIAEILLAAKCD 169

Query: 525 IELGA---STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLL 581
           +        +PL  AA+E   + V   L   + V  K + G+T L  A  N     A  +
Sbjct: 170 LHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQM 229

Query: 582 LSYGAN 587
                +
Sbjct: 230 SKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  151 bits (385), Expect = 6e-42
 Identities = 69/279 (24%), Positives = 116/279 (41%), Gaps = 46/279 (16%)

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
            N +  ++N  +PL  AA AGHV +  +L++ GA I+T  +E + + L  A    HL+ V
Sbjct: 2   MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDT-CSEDQRTPLMEAAENNHLEAV 60

Query: 307 RFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCER 366
           ++L+ AGA  + K  E  T L  A+  GH EV + LL +G   V+      + P      
Sbjct: 61  KYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTP------ 114

Query: 367 PSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVL 426
                      ++ A     V  VK LL++G  ++   +E    L  A  +G  ++A++L
Sbjct: 115 -----------MIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEIL 163

Query: 427 LAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILI 486
           LA   ++    I G+ +PL  AA   R     + V                      + +
Sbjct: 164 LAAKCDLHAVNIHGD-SPLHIAARENRY----DCVV---------------------LFL 197

Query: 487 P-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGAN 524
              + +    +E  ET L  A     +  A  + K   +
Sbjct: 198 SRDSDVTLKNKE-GETPLQCASLNSQVWSALQMSKALQD 235

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  148 bits (377), Expect = 8e-41
 Identities = 57/259 (22%), Positives = 103/259 (39%), Gaps = 30/259 (11%)

Query: 24  VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATG 83
                    S L  A  AG+ ++  +L+   AN++        TPLMEAA +        
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQ-RTPLMEAAENN------- 55

Query: 84  DGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERS-LVQACSDGDVKTVKKL 142
                  E ++ L       +   A         +P+     + L  A   G  + V+ L
Sbjct: 56  -----HLEAVKYL-------IKAGA-------LVDPKDAEGSTCLHLAAKKGHYEVVQYL 96

Query: 143 LTEGRS-VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 201
           L+ G+  V+   D G + +  A    + +L ++LL+  +++  R  +     L  AA SG
Sbjct: 97  LSNGQMDVNCQDDGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEEN-ICLHWAAFSG 155

Query: 202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLM 261
            ++I  +L+    D++  +  G++PL  A        V + L   ++V   N+ G TPL 
Sbjct: 156 CVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQ 215

Query: 262 EAASAGHVGVAKILLEYGA 280
            A+    V  A  + +   
Sbjct: 216 CASLNSQVWSALQMSKALQ 234

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score =  141 bits (359), Expect = 2e-38
 Identities = 52/192 (27%), Positives = 82/192 (42%), Gaps = 36/192 (18%)

Query: 555 VHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLL 609
              + Q   + L  A E GH D+  +L+  GAN+     D  T L+EAA+  H   V+ L
Sbjct: 4   FKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYL 63

Query: 610 LDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA------NLDNSTMLIEAAKGGH 663
           +     V  K   G T L  A + GH +V   LLS G       +    T +I A +  H
Sbjct: 64  IKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDGGWTPMIWATEYKH 123

Query: 664 ANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTD 723
            ++V+LLL                       S+G  S ++ +    +  L +A  +G  D
Sbjct: 124 VDLVKLLL-----------------------SKG--SDINIRDNEENICLHWAAFSGCVD 158

Query: 724 VADLLLSYGANL 735
           +A++LL+   +L
Sbjct: 159 IAEILLAAKCDL 170

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A* Length = 237

 Score = 89.0 bits (222), Expect = 5e-20
 Identities = 48/250 (19%), Positives = 76/250 (30%), Gaps = 71/250 (28%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIK 63
           A  +  ++ VK L+  G  V     EG + L LA   G+YE+ Q LL+    +V  +   
Sbjct: 51  AAENNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQMDVNCQDDG 110

Query: 64  GECTPLMEAASSGFGKLATGDGKL-----ADPEVLRRLTSSVSCALDEAAAALTRMRNEN 118
           G  TP++ A       L     KL     +D  +                      R+  
Sbjct: 111 GW-TPMIWATEYKHVDLV----KLLLSKGSDINI----------------------RDNE 143

Query: 119 PRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM 178
                   L  A   G V   + LL     +H     G+                     
Sbjct: 144 ----ENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGD--------------------- 178

Query: 179 HANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAV 238
                        +PL  AA     + V L ++  +DV  ++  G TPL  A        
Sbjct: 179 -------------SPLHIAARENRYDCVVLFLSRDSDVTLKNKEGETPLQCASLNSQVWS 225

Query: 239 VRVLLECGAN 248
              + +   +
Sbjct: 226 ALQMSKALQD 235

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  200 bits (510), Expect = 6e-59
 Identities = 47/297 (15%), Positives = 92/297 (30%), Gaps = 35/297 (11%)

Query: 128 VQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI 187
           +   +    K +K  L   +   +    G S    A +     L   LL   A      +
Sbjct: 4   LSRINTWKSKQLKSFL-SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN---L 59

Query: 188 KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA 247
                PL +AA+    +IV++L+  G D +     GNT L YA   G+   V++ ++   
Sbjct: 60  LENEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNW 119

Query: 248 NVEDHNENG-HTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
            +  + + G  T    A     V +    L      +T       S + +    GH+DM+
Sbjct: 120 RLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP--STFDLAILLSCIHITIKNGHVDMM 177

Query: 307 RFLLSAGADQEHKTDEMHT-ALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCE 365
             LL            +    +  A  +  +E+ + L                       
Sbjct: 178 ILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDIN-----------IYSA-- 224

Query: 366 RPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYEL 422
                        ++     D +  K ++ +       +   +  L +  +    E+
Sbjct: 225 ------------NLENVLLDDAEIAKMIIEKHVEYKSDSYTKD--LDIVKNNKLDEI 267

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  196 bits (500), Expect = 2e-57
 Identities = 41/288 (14%), Positives = 97/288 (33%), Gaps = 29/288 (10%)

Query: 162 LACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSS 221
           L+    +            +     + G  +    A +   + +V  L+N GA  N    
Sbjct: 4   LSRINTWKSKQLKSFLSSKDTFKADVHG-HSASYYAIADNNVRLVCTLLNAGALKNLLE- 61

Query: 222 SGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
               PL  A       +V++LL  G +    ++ G+T L  A  +G++   K+ ++    
Sbjct: 62  -NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWR 120

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKL 341
           +  +     +++   A     + +V + LS           + + +     +GHV++  L
Sbjct: 121 LMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDLAILL-SCIHITIKNGHVDMMIL 179

Query: 342 LLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVH 401
           LLD      +      F P                 +  A  + D++ ++ L     +++
Sbjct: 180 LLDYMTS-TNTNNSLLFIP----------------DIKLAIDNKDIEMLQALFKYDINIY 222

Query: 402 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA 449
                              E+A++++  H   +      +   +++  
Sbjct: 223 SA-------NLENVLLDDAEIAKMIIEKHVEYKSDSYTKD-LDIVKNN 262

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  191 bits (489), Expect = 7e-56
 Identities = 42/268 (15%), Positives = 75/268 (27%), Gaps = 47/268 (17%)

Query: 485 LIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI-ELGASTPLMEAAQEGHLE 543
            +              +A   A     + +   LL  GA    L    PL +AA     +
Sbjct: 18  FLSSKDTFKADVH-GHSASYYAIADNNVRLVCTLLNAGALKNLLENEFPLHQAATLEDTK 76

Query: 544 LVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD------NSTMLIEA 597
           +V+ LL SG         G+TAL YA ++G+     L +     L         T    A
Sbjct: 77  IVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHA 136

Query: 598 AKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD------N 651
                 ++V   L              + +    +NGH D+  LLL Y  + +       
Sbjct: 137 VMLNDVSIVSYFLSE-IPSTFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLF 195

Query: 652 STMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDT 711
              +  A       ++Q L                                        +
Sbjct: 196 IPDIKLAIDNKDIEMLQALF-----------------------KYD------IN---IYS 223

Query: 712 ALTYACENGHTDVADLLLSYGANLRNRT 739
           A          ++A +++      ++ +
Sbjct: 224 ANLENVLLDDAEIAKMIIEKHVEYKSDS 251

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  176 bits (449), Expect = 3e-50
 Identities = 49/362 (13%), Positives = 92/362 (25%), Gaps = 92/362 (25%)

Query: 379 VQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI 438
           +   +    K +K  L   +   +    G S    A +     L   LL   A      +
Sbjct: 4   LSRINTWKSKQLKSFL-SSKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKN---L 59

Query: 439 KGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEE 497
                PL +AA+        + V                      IL+  G   +   ++
Sbjct: 60  LENEFPLHQAATLEDT----KIVK---------------------ILLFSGLDDSQFDDK 94

Query: 498 TQETALTLACCGGFLDVADFLLKNGANIEL----GASTPLMEAAQEGHLELVRYLLDSGA 553
              TAL  A   G +      +K    +      G  T    A     + +V Y L    
Sbjct: 95  -GNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP 153

Query: 554 QVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFP 613
                     + +    +NGH D+  LLL Y  +                          
Sbjct: 154 -STFDLAILLSCIHITIKNGHVDMMILLLDYMTS-------------------------- 186

Query: 614 RSVHAKTQTGDT-ALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLD 672
              +          +  A +N   ++   L  Y  N+   +  +E      A + +++++
Sbjct: 187 --TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY--SANLENVLLDDAEIAKMIIE 242

Query: 673 FPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYG 732
                                    K     + + T D  +    +       +  L   
Sbjct: 243 -------------------------KHVEYKSDSYTKDLDIVKNNKLDEIISKNKELRLM 277

Query: 733 AN 734
             
Sbjct: 278 YV 279

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  170 bits (433), Expect = 4e-48
 Identities = 34/210 (16%), Positives = 75/210 (35%), Gaps = 10/210 (4%)

Query: 123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV 182
           NE  L QA +  D K VK LL  G    +  D+G + L  A  +G  +  ++ +  +  +
Sbjct: 62  NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRL 121

Query: 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVL 242
              G  G  T    A     + IV   ++         +   + +      GH  ++ +L
Sbjct: 122 MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTF-DLAILLSCIHITIKNGHVDMMILL 180

Query: 243 LECGANVEDHNENGHTP-LMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKG 301
           L+   +   +N     P +  A     + + + L +Y   I +        A        
Sbjct: 181 LDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYS--------ANLENVLLD 232

Query: 302 HLDMVRFLLSAGADQEHKTDEMHTALMEAS 331
             ++ + ++    + +  +      +++ +
Sbjct: 233 DAEIAKMIIEKHVEYKSDSYTKDLDIVKNN 262

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  168 bits (427), Expect = 3e-47
 Identities = 42/393 (10%), Positives = 88/393 (22%), Gaps = 121/393 (30%)

Query: 197 AASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENG 256
             ++   + ++  ++   D       G++   YA A  +  +V  LL  GA         
Sbjct: 6   RINTWKSKQLKSFLS-SKDTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNL--LEN 62

Query: 257 HTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQ 316
             PL +AA+     + KILL  G   +   ++   +AL  A   G++  V+  +      
Sbjct: 63  EFPLHQAATLEDTKIVKILLFSGLDDSQ-FDDKGNTALYYAVDSGNMQTVKLFVKKNWRL 121

Query: 317 EHKT-DEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYS 375
                    T+   A M   V +    L                                
Sbjct: 122 MFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIP---------------------------- 153

Query: 376 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 435
                                            S + +    G+ ++  +LL    +   
Sbjct: 154 ------------------------STFDLAILLSCIHITIKNGHVDMMILLLDYMTSTNT 189

Query: 436 RGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILI-PGAKINAH 494
                    +  A  +       E +                       L      I   
Sbjct: 190 NNSLLFIPDIKLAIDNKDI----EMLQ---------------------ALFKYDINIY-- 222

Query: 495 TEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQ 554
                 +A                                        E+ + +++   +
Sbjct: 223 ------SANLENVLLD------------------------------DAEIAKMIIEKHVE 246

Query: 555 VHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
             + + T D  +    +       +  L     
Sbjct: 247 YKSDSYTKDLDIVKNNKLDEIISKNKELRLMYV 279

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  160 bits (408), Expect = 1e-44
 Identities = 46/395 (11%), Positives = 98/395 (24%), Gaps = 118/395 (29%)

Query: 256 GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD 315
           G        +       K  L         ++    SA   A    ++ +V  LL+AGA 
Sbjct: 1   GMDLS--RINTWKSKQLKSFLS-SKDTFK-ADVHGHSASYYAIADNNVRLVCTLLNAGAL 56

Query: 316 QEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYS 375
           +    +E    L +A+     ++ K+LL SG                             
Sbjct: 57  KNLLENE--FPLHQAATLEDTKIVKILLFSGL---------------------------- 86

Query: 376 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 435
                                     +  D+G + L  A  +G  +  ++ +  +  +  
Sbjct: 87  -----------------------DDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMF 123

Query: 436 RGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAH 494
            G  G  T    A            VS                       +         
Sbjct: 124 YGKTGWKTSFYHAVMLNDV----SIVS---------------------YFLSEIPSTFDL 158

Query: 495 TEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQ 554
                 + + +                                + GH++++  LLD    
Sbjct: 159 AIL--LSCIHIT------------------------------IKNGHVDMMILLLDYMTS 186

Query: 555 VHAKTQTGDT-ALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFP 613
            +          +  A +N   ++   L  Y  N+   +  +E      A + +++++  
Sbjct: 187 TNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY--SANLENVLLDDAEIAKMIIEKH 244

Query: 614 RSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
               + + T D  +    +       +  L     
Sbjct: 245 VEYKSDSYTKDLDIVKNNKLDEIISKNKELRLMYV 279

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score =  124 bits (315), Expect = 6e-32
 Identities = 36/276 (13%), Positives = 83/276 (30%), Gaps = 35/276 (12%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A +D +V+ V  LL  G   +      E  L  A +    ++ ++LL    +      KG
Sbjct: 38  AIADNNVRLVCTLLNAGALKNLLE--NEFPLHQAATLEDTKIVKILLFSGLDDSQFDDKG 95

Query: 65  ECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE 124
             T L  A  SG  +           ++           + +    +   +         
Sbjct: 96  N-TALYYAVDSGNMQTV---------KLF----------VKKNWRLMFYGKTGWKTS--- 132

Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184
                A    DV  V   L+E  S  +      S + +    G+ ++  +LL    +   
Sbjct: 133 --FYHAVMLNDVSIVSYFLSEIPSTFDLAI-LLSCIHITIKNGHVDMMILLLDYMTSTNT 189

Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
                    +  A  +  IE+++ L  +  ++        +  +         + ++++E
Sbjct: 190 NNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY-------SANLENVLLDDAEIAKMIIE 242

Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280
                +  +      +++      +      L    
Sbjct: 243 KHVEYKSDSYTKDLDIVKNNKLDEIISKNKELRLMY 278

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus} Length = 285

 Score = 45.6 bits (109), Expect = 3e-05
 Identities = 24/220 (10%), Positives = 65/220 (29%), Gaps = 43/220 (19%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEG-ESLLSLACSAGYYELAQVLLAMHANVEDRGIK 63
           A   G+++TVK  + +   +      G ++    A       +    L+   +  D    
Sbjct: 102 AVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL--A 159

Query: 64  GECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQN 123
              + +     +G              +++  L       LD          + N     
Sbjct: 160 ILLSCIHITIKNGH------------VDMMILL-------LDYMT-------STNTNNSL 193

Query: 124 ER--SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 181
                +  A  + D++ ++ L     +++                   E+A++++  H  
Sbjct: 194 LFIPDIKLAIDNKDIEMLQALFKYDINIYSA-------NLENVLLDDAEIAKMIIEKHVE 246

Query: 182 VEDRGIKGECTPLMEAASSGFI----EIVRLLINHGADVN 217
            +      +   +++      I    + +RL+  +    N
Sbjct: 247 YKSDSYTKD-LDIVKNNKLDEIISKNKELRLMYVNCVKKN 285

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  190 bits (486), Expect = 5e-57
 Identities = 42/156 (26%), Positives = 73/156 (46%), Gaps = 1/156 (0%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
             + + A+ G +  +   I     +N     G TPLM+A A G  AVV  LL+ GA+ + 
Sbjct: 5   LSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQL 64

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
             +   + L  A S G+  + K+LL+ G  +N   +    + L  A +  H+  V+ LL 
Sbjct: 65  LGKGRESALSLACSKGYTDIVKMLLDCGVDVN-EYDWNGGTPLLYAVHGNHVKCVKMLLE 123

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           +GAD   +TD  + ++  A   G+  V +++     
Sbjct: 124 SGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  176 bits (448), Expect = 1e-51
 Identities = 44/163 (26%), Positives = 74/163 (45%), Gaps = 2/163 (1%)

Query: 160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
           +    + G        +     +     +G  TPLM AA+ G I +V  L+ +GAD    
Sbjct: 7   VHQLAAQGEMLYLATRIEQENVINHTDEEG-FTPLMWAAAHGQIAVVEFLLQNGADPQLL 65

Query: 220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
                + L  AC+ G+  +V++LL+CG +V +++ NG TPL+ A    HV   K+LLE G
Sbjct: 66  GKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESG 125

Query: 280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDE 322
           A       +   +++ LA   G+  + + + S          E
Sbjct: 126 ADPT-IETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  166 bits (423), Expect = 4e-48
 Identities = 39/159 (24%), Positives = 70/159 (44%), Gaps = 8/159 (5%)

Query: 500 ETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVH 556
             ++      G +      ++    I        TPLM AA  G + +V +LL +GA   
Sbjct: 4   SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQ 63

Query: 557 AKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLD 611
              +  ++AL+ AC  G+TD+  +LL  G ++     +  T L+ A  G H   V++LL+
Sbjct: 64  LLGKGRESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLE 123

Query: 612 FPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
                  +T +G  ++  A   G+  V  ++ S+   L 
Sbjct: 124 SGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLL 162

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  164 bits (418), Expect = 2e-47
 Identities = 38/211 (18%), Positives = 75/211 (35%), Gaps = 58/211 (27%)

Query: 530 STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 589
           S  + + A +G +  +   ++    ++   + G T L +A  +G   V + LL  GA+  
Sbjct: 4   SLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD-- 61

Query: 590 NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 649
                                          +  ++AL+ AC  G+TD+  +LL  G ++
Sbjct: 62  --------------------------PQLLGKGRESALSLACSKGYTDIVKMLLDCGVDV 95

Query: 650 -----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHA 704
                +  T L+ A  G H   V++LL+                           +    
Sbjct: 96  NEYDWNGGTPLLYAVHGNHVKCVKMLLE-------------------------SGADPTI 130

Query: 705 KTQTGDTALTYACENGHTDVADLLLSYGANL 735
           +T +G  ++  A   G+  V  ++ S+   L
Sbjct: 131 ETDSGYNSMDLAVALGYRSVQQVIESHLLKL 161

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  159 bits (405), Expect = 1e-45
 Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 1/163 (0%)

Query: 126 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 185
           S+ Q  + G++  +   + +   ++ T +EG + L  A + G   + + LL   A+ +  
Sbjct: 6   SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL 65

Query: 186 GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245
           G     + L  A S G+ +IV++L++ G DVN    +G TPL+YA  G H   V++LLE 
Sbjct: 66  GKGR-ESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLES 124

Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNE 288
           GA+     ++G+  +  A + G+  V +++  +   +  +  E
Sbjct: 125 GADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLKLLQNIKE 167

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  151 bits (385), Expect = 6e-43
 Identities = 43/126 (34%), Positives = 63/126 (50%), Gaps = 1/126 (0%)

Query: 222 SGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
           + +  +    A G    +   +E    +   +E G TPLM AA+ G + V + LL+ GA 
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKL 341
                   +ESAL+LAC KG+ D+V+ LL  G D         T L+ A    HV+  K+
Sbjct: 62  PQLLGKG-RESALSLACSKGYTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKM 120

Query: 342 LLDSGA 347
           LL+SGA
Sbjct: 121 LLESGA 126

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  134 bits (340), Expect = 1e-36
 Identities = 42/183 (22%), Positives = 71/183 (38%), Gaps = 31/183 (16%)

Query: 411 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFF 470
           +    + G        +     +     +G  TPLM AA+ G+       V         
Sbjct: 7   VHQLAAQGEMLYLATRIEQENVINHTDEEG-FTPLMWAAAHGQI----AVVE-------- 53

Query: 471 PNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA 529
                         L+  GA      +  +E+AL+LAC  G+ D+   LL  G ++    
Sbjct: 54  -------------FLLQNGADPQLLGKG-RESALSLACSKGYTDIVKMLLDCGVDVNEYD 99

Query: 530 S---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA 586
               TPL+ A    H++ V+ LL+SGA    +T +G  ++  A   G+  V  ++ S+  
Sbjct: 100 WNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLL 159

Query: 587 NLD 589
            L 
Sbjct: 160 KLL 162

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  112 bits (284), Expect = 3e-29
 Identities = 32/151 (21%), Positives = 53/151 (35%), Gaps = 30/151 (19%)

Query: 589 DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
            NS  + + A  G    +   ++    ++   + G T L +A  +G   V + LL  GA+
Sbjct: 2   ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGAD 61

Query: 649 L-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVH 703
                    + L  A   G+ ++V++LLD                             V+
Sbjct: 62  PQLLGKGRESALSLACSKGYTDIVKMLLD-------------------------CGVDVN 96

Query: 704 AKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                G T L YA    H     +LL  GA+
Sbjct: 97  EYDWNGGTPLLYAVHGNHVKCVKMLLESGAD 127

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score =  101 bits (255), Expect = 3e-25
 Identities = 38/268 (14%), Positives = 67/268 (25%), Gaps = 107/268 (39%)

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA 352
           ++     +G +  +   +       H  +E  T LM A+  G + V + LL +GA     
Sbjct: 6   SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGA----- 60

Query: 353 YARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS 412
                                                                  ES LS
Sbjct: 61  ----------------------------------------------DPQLLGKGRESALS 74

Query: 413 LACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPN 472
           LACS GY ++ ++LL    +V +    G  TPL+ A                        
Sbjct: 75  LACSKGYTDIVKMLLDCGVDVNEYDWNG-GTPLLYAVHGNH------------------- 114

Query: 473 DKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTP 532
                     ++L  GA     T                         +G          
Sbjct: 115 -VKC----VKMLLESGADPTIET------------------------DSG-------YNS 138

Query: 533 LMEAAQEGHLELVRYLLDSGAQVHAKTQ 560
           +  A   G+  + + +     ++    +
Sbjct: 139 MDLAVALGYRSVQQVIESHLLKLLQNIK 166

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 70.9 bits (175), Expect = 2e-14
 Identities = 37/218 (16%), Positives = 71/218 (32%), Gaps = 62/218 (28%)

Query: 1   SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 60
           S+ Q  + G++  +   + +   ++ T +EG + L  A + G   + + LL   A+ +  
Sbjct: 6   SVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLL 65

Query: 61  GIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPR 120
           G     + L  A S G+             ++++ L       LD          + N  
Sbjct: 66  GKGR-ESALSLACSKGY------------TDIVKML-------LDCGV-------DVNEY 98

Query: 121 PQNERS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 179
             N  + L+ A     VK VK LL  G      TD G                       
Sbjct: 99  DWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGY---------------------- 136

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVN 217
                         +  A + G+  + +++ +H   + 
Sbjct: 137 ------------NSMDLAVALGYRSVQQVIESHLLKLL 162

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A Length = 167

 Score = 41.2 bits (98), Expect = 2e-04
 Identities = 1/27 (3%), Positives = 5/27 (18%)

Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
              ++      G        +     +
Sbjct: 3   NSLSVHQLAAQGEMLYLATRIEQENVI 29

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  194 bits (496), Expect = 1e-56
 Identities = 68/376 (18%), Positives = 119/376 (31%), Gaps = 90/376 (23%)

Query: 216 VNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
           +    +            G E  +   +      +   ++G    + A S+G       L
Sbjct: 1   MKMADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRL 59

Query: 276 LEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGH 335
           LE GA IN  +N    +AL  AC   ++DMV+FL+  GA+     +E    L  A+  G+
Sbjct: 60  LERGADINY-ANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGY 118

Query: 336 VEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLT 395
           +++A+ L+  GA                                                
Sbjct: 119 LDIAEYLISQGA------------------------------------------------ 130

Query: 396 EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAASSGRQ 454
               V     EG++ L +A      EL Q  +     ++E            E      +
Sbjct: 131 ---HVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIE--------AARKEEE----R 175

Query: 455 CNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDV 514
             L ++                                 H + +  TAL +A   G+ +V
Sbjct: 176 IMLRDARQWLNSG--------------------HINDVRHAK-SGGTALHVAAAKGYTEV 214

Query: 515 ADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACE 571
              L++   ++ +      TPL  AA  G  E  R L+++   + A  + G TA   A E
Sbjct: 215 LKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADE 274

Query: 572 NGHTDVADLLLSYGAN 587
           +    + +L       
Sbjct: 275 DILGYLEELQKKQNLL 290

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  189 bits (483), Expect = 6e-55
 Identities = 62/315 (19%), Positives = 117/315 (37%), Gaps = 27/315 (8%)

Query: 122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 181
           + +R+       G    ++  + + +      D+G   L  ACS+G  E    LL   A+
Sbjct: 7   KQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFL-AACSSGDTEEVLRLLERGAD 65

Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           +    + G  T L +A     +++V+ L+ +GA++N   + G  PL  A + G+  +   
Sbjct: 66  INYANVDG-LTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEY 124

Query: 242 LLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKG 301
           L+  GA+V   N  G TPL  A       + +  +    G++       E+A        
Sbjct: 125 LISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ-GVD------IEAARKEEERIM 177

Query: 302 HLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPN 361
             D  ++L S   +         TAL  A+  G+ EV KLL+ +    V+      + P 
Sbjct: 178 LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARY-DVNIKDYDGWTP- 235

Query: 362 DKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYE 421
                           L  A   G  +  + L+     +      G++   +A       
Sbjct: 236 ----------------LHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGY 279

Query: 422 LAQVLLAMHANVEDR 436
           L ++    +    ++
Sbjct: 280 LEELQKKQNLLHSEK 294

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  189 bits (483), Expect = 8e-55
 Identities = 74/337 (21%), Positives = 115/337 (34%), Gaps = 61/337 (18%)

Query: 406 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYA 465
           + +    L    G     +  +      + +   G     + A SSG             
Sbjct: 7   KQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG--AVFLAACSSG------------- 51

Query: 466 RHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI 525
                  D          +L  GA IN    +   TAL  AC    +D+  FL++NGANI
Sbjct: 52  -------DTEE----VLRLLERGADINYANVD-GLTALHQACIDDNVDMVKFLVENGANI 99

Query: 526 ELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLL 582
               +    PL  AA  G+L++  YL+  GA V A    GDT L  A E    ++    +
Sbjct: 100 NQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEV 159

Query: 583 SYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
           +     D      E  +    +  Q L     +     ++G TAL  A   G+T+V  LL
Sbjct: 160 NRQGV-DIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLL 218

Query: 643 LSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQG 697
           +    ++     D  T L  AA  G     ++L+                    +LC   
Sbjct: 219 IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILV-------------------ENLCD-- 257

Query: 698 KKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
               + A  + G TA   A E+    + +L       
Sbjct: 258 ----MEAVNKVGQTAFDVADEDILGYLEELQKKQNLL 290

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  187 bits (478), Expect = 3e-54
 Identities = 54/233 (23%), Positives = 97/233 (41%), Gaps = 8/233 (3%)

Query: 116 NENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVL 175
               +  +    + ACS GD + V +LL  G  ++    +G + L  AC     ++ + L
Sbjct: 33  KTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFL 92

Query: 176 LAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH 235
           +   AN+     +G   PL  AAS G+++I   LI+ GA V   +S G+TPL  A     
Sbjct: 93  VENGANINQPDNEG-WIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAM 151

Query: 236 EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALT 295
           E +++  +           +      E          + L         H+     +AL 
Sbjct: 152 EELLQNEVN------RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKS-GGTALH 204

Query: 296 LACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQ 348
           +A  KG+ ++++ L+ A  D   K  +  T L  A+  G  E  ++L+++   
Sbjct: 205 VAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCD 257

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  183 bits (467), Expect = 1e-52
 Identities = 61/300 (20%), Positives = 111/300 (37%), Gaps = 30/300 (10%)

Query: 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGA 214
           + +    L    G     +  +      + +   G     + A SSG  E V  L+  GA
Sbjct: 7   KQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG--AVFLAACSSGDTEEVLRLLERGA 64

Query: 215 DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKI 274
           D+N  +  G T L  AC   +  +V+ L+E GAN+   +  G  PL  AAS G++ +A+ 
Sbjct: 65  DINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEY 124

Query: 275 LLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS-AGADQEHKTDEMHTALMEASMD 333
           L+  GA +    N   ++ L +A  +   ++++  ++  G D       +  A  E    
Sbjct: 125 LISQGAHVGA-VNSEGDTPLDIAEEEAMEELLQNEVNRQGVD-------IEAARKEEERI 176

Query: 334 GHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKL 393
              +  + L          +A+                      L  A + G  + +K L
Sbjct: 177 MLRDARQWLNSGHIN-DVRHAKSGGTA-----------------LHVAAAKGYTEVLKLL 218

Query: 394 LTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGR 453
           +     V+    +G + L  A   G  E  ++L+    ++E     G+ T    A     
Sbjct: 219 IQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQ-TAFDVADEDIL 277

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  182 bits (465), Expect = 3e-52
 Identities = 51/261 (19%), Positives = 93/261 (35%), Gaps = 46/261 (17%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLEL 544
             K     ++        AC  G  +    LL+ GA+I        T L +A  + ++++
Sbjct: 31  RKKTKVKFDD--GAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDM 88

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAK 599
           V++L+++GA ++     G   L  A   G+ D+A+ L+S GA++     +  T L  A +
Sbjct: 89  VKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEE 148

Query: 600 GGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTM 654
                ++Q  ++       +    + A          D    L S   N         T 
Sbjct: 149 EAMEELLQNEVN------RQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTA 202

Query: 655 LIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALT 714
           L  AA  G+  V++LL+                              V+ K   G T L 
Sbjct: 203 LHVAAAKGYTEVLKLLI-----------------------QAR--YDVNIKDYDGWTPLH 237

Query: 715 YACENGHTDVADLLLSYGANL 735
            A   G  +   +L+    ++
Sbjct: 238 AAAHWGKEEACRILVENLCDM 258

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  181 bits (463), Expect = 5e-52
 Identities = 65/399 (16%), Positives = 118/399 (29%), Gaps = 116/399 (29%)

Query: 253 NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312
           +             G     +  +          ++   +    AC  G  + V  LL  
Sbjct: 5   DAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDD--GAVFLAACSSGDTEEVLRLLER 62

Query: 313 GADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISY 372
           GAD  +   +  TAL +A +D +V++ K L+++GA                         
Sbjct: 63  GADINYANVDGLTALHQACIDDNVDMVKFLVENGA------------------------- 97

Query: 373 TYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 432
                                     ++++  +EG   L  A S GY ++A+ L++  A+
Sbjct: 98  --------------------------NINQPDNEGWIPLHAAASCGYLDIAEYLISQGAH 131

Query: 433 VEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKIN 492
           V     +G+ TPL  A                        ++ +       +   G  I 
Sbjct: 132 VGAVNSEGD-TPLDIAEEEA-------------------MEELLQNE----VNRQGVDIE 167

Query: 493 AHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVRYLL 549
                    A          D   +L     N    A    T L  AA +G+ E+++ L+
Sbjct: 168 --------AARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLI 219

Query: 550 DSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLL 609
            +   V+ K   G T L  A   G  +   +L+    +++                    
Sbjct: 220 QARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME-------------------- 259

Query: 610 LDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
                   A  + G TA   A E+    + +L       
Sbjct: 260 --------AVNKVGQTAFDVADEDILGYLEELQKKQNLL 290

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  176 bits (448), Expect = 5e-50
 Identities = 62/372 (16%), Positives = 102/372 (27%), Gaps = 88/372 (23%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
                    G    +   +        +   G    + AC+ G    V  LLE GA++  
Sbjct: 10  RNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG-AVFLAACSSGDTEEVLRLLERGADINY 68

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
            N +G T L +A    +V + K L+E GA IN   +      L  A   G+LD+  +L+S
Sbjct: 69  ANVDGLTALHQACIDDNVDMVKFLVENGANIN-QPDNEGWIPLHAAASCGYLDIAEYLIS 127

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSIS 371
            GA       E  T L  A  +   E+                                 
Sbjct: 128 QGAHVGAVNSEGDTPLDIAEEEAMEEL--------------------------------- 154

Query: 372 YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 431
                             ++  +           + E+           +  Q L + H 
Sbjct: 155 ------------------LQNEVNRQG------VDIEAARKEEERIMLRDARQWLNSGHI 190

Query: 432 NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKI 491
           N       G  T L  AA+ G                       V      +++     +
Sbjct: 191 NDVRHAKSGG-TALHVAAAKGY--------------------TEV----LKLLIQARYDV 225

Query: 492 NAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVRYL 548
           N    +   T L  A   G  +    L++N  ++E       T    A ++    L    
Sbjct: 226 NIKDYD-GWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQ 284

Query: 549 LDSGAQVHAKTQ 560
                    K +
Sbjct: 285 KKQNLLHSEKRE 296

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  165 bits (420), Expect = 5e-46
 Identities = 68/322 (21%), Positives = 113/322 (35%), Gaps = 43/322 (13%)

Query: 30  EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLAD 89
           + +    L    G     +  +      + +   G     + A SSG            D
Sbjct: 7   KQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDG--AVFLAACSSG------------D 52

Query: 90  PEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNER---SLVQACSDGDVKTVKKLLTEG 146
            E + RL                  R  +    N     +L QAC D +V  VK L+  G
Sbjct: 53  TEEVLRLLE----------------RGADINYANVDGLTALHQACIDDNVDMVKFLVENG 96

Query: 147 RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIV 206
            ++++  +EG   L  A S GY ++A+ L++  A+V     +G+ TPL  A      E++
Sbjct: 97  ANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGD-TPLDIAEEEAMEELL 155

Query: 207 RLLIN-HGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAAS 265
           +  +N  G D                        + L     N   H ++G T L  AA+
Sbjct: 156 QNEVNRQGVD-------IEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAA 208

Query: 266 AGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHT 325
            G+  V K+L++    +N   +    + L  A + G  +  R L+    D E       T
Sbjct: 209 KGYTEVLKLLIQARYDVN-IKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQT 267

Query: 326 ALMEASMDGHVEVAKLLLDSGA 347
           A   A  D    + +L      
Sbjct: 268 AFDVADEDILGYLEELQKKQNL 289

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  153 bits (389), Expect = 9e-42
 Identities = 60/323 (18%), Positives = 112/323 (34%), Gaps = 39/323 (12%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
                  G    ++  + + +      D+G   L  ACS+G  E    LL   A++    
Sbjct: 12  EQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFL-AACSSGDTEEVLRLLERGADINYAN 70

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
           + G  T L +A                  ++++ L       ++  A       N N   
Sbjct: 71  VDG-LTALHQACIDDN------------VDMVKFL-------VENGA-------NINQPD 103

Query: 122 QNERS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH- 179
                 L  A S G +   + L+++G  V     EG++ L +A      EL Q  +    
Sbjct: 104 NEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQG 163

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239
            ++E            E       +  + L +   +    + SG T L  A A G+  V+
Sbjct: 164 VDIE--------AARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVL 215

Query: 240 RVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACY 299
           ++L++   +V   + +G TPL  AA  G     +IL+E    +   +    ++A  +A  
Sbjct: 216 KLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAVNKV-GQTAFDVADE 274

Query: 300 KGHLDMVRFLLSAGADQEHKTDE 322
                +             K ++
Sbjct: 275 DILGYLEELQKKQNLLHSEKREK 297

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1 Length = 299

 Score =  107 bits (269), Expect = 8e-26
 Identities = 33/205 (16%), Positives = 53/205 (25%), Gaps = 82/205 (40%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
                    G    +   +    +   K   G   L  AC +G T+    LL  GA+   
Sbjct: 10  RNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFL-AACSSGDTEEVLRLLERGAD--- 65

Query: 591 STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
                                    ++     G TAL  AC + + D+   L+  GAN  
Sbjct: 66  -------------------------INYANVDGLTALHQACIDDNVDMVKFLVENGAN-- 98

Query: 651 NSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGD 710
                                                              ++     G 
Sbjct: 99  ---------------------------------------------------INQPDNEGW 107

Query: 711 TALTYACENGHTDVADLLLSYGANL 735
             L  A   G+ D+A+ L+S GA++
Sbjct: 108 IPLHAAASCGYLDIAEYLISQGAHV 132

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  188 bits (481), Expect = 3e-56
 Identities = 42/160 (26%), Positives = 75/160 (46%), Gaps = 2/160 (1%)

Query: 189 GECTPLMEAASSGFIEIVRLLINHGAD-VNGQSSSGNTPLMYACAGGHEAVVRVLLECGA 247
           G+   + + A+ G ++ ++  +  G + VN     G TPL++A A G    VR LLE GA
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA 60

Query: 248 NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVR 307
           +     +   + L  A++ G+  +  +LLE    IN +      + L  A    H+  V 
Sbjct: 61  DPHILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWN-GGTPLLYAVRGNHVKCVE 119

Query: 308 FLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
            LL+ GAD   + D  +T +  A   G+ +V +++ +   
Sbjct: 120 ALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHIL 159

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  176 bits (450), Expect = 8e-52
 Identities = 40/166 (24%), Positives = 73/166 (43%), Gaps = 1/166 (0%)

Query: 160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
           +    + G  +  +  L    N+ ++  +   TPL+ A++ G IE VR L+  GAD +  
Sbjct: 6   IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHIL 65

Query: 220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
           +    + L  A  GG+  +V +LLE   ++  ++ NG TPL+ A    HV   + LL  G
Sbjct: 66  AKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARG 125

Query: 280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHT 325
           A + T   +   + + LA   G+  + + + +              
Sbjct: 126 ADLTT-EADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPAD 170

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  165 bits (420), Expect = 1e-47
 Identities = 42/159 (26%), Positives = 72/159 (45%), Gaps = 9/159 (5%)

Query: 501 TALTLACCGGFLDVADFLLKNGANIELGA----STPLMEAAQEGHLELVRYLLDSGAQVH 556
            ++      G LD     L+ G N+         TPL+ A+  G +E VR+LL+ GA  H
Sbjct: 4   LSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPH 63

Query: 557 AKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLD 611
              +  ++AL+ A   G+TD+  LLL    ++     +  T L+ A +G H   V+ LL 
Sbjct: 64  ILAKERESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123

Query: 612 FPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
               +  +  +G T +  A   G+  V  ++ ++   L 
Sbjct: 124 RGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLF 162

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  161 bits (411), Expect = 2e-46
 Identities = 41/214 (19%), Positives = 76/214 (35%), Gaps = 59/214 (27%)

Query: 528 GASTPLMEAAQEGHLELVRYLLDSGAQ-VHAKTQTGDTALTYACENGHTDVADLLLSYGA 586
           G S  + + A +G L+ ++  L  G   V+   + G T L +A   G  +    LL +GA
Sbjct: 1   GDSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGA 60

Query: 587 NLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
           +                             H   +  ++AL+ A   G+TD+  LLL   
Sbjct: 61  D----------------------------PHILAKERESALSLASTGGYTDIVGLLLERD 92

Query: 647 ANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSG 701
            ++     +  T L+ A +G H   V+ LL                          + + 
Sbjct: 93  VDINIYDWNGGTPLLYAVRGNHVKCVEALLA-------------------------RGAD 127

Query: 702 VHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
           +  +  +G T +  A   G+  V  ++ ++   L
Sbjct: 128 LTTEADSGYTPMDLAVALGYRKVQQVIENHILKL 161

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  156 bits (396), Expect = 3e-44
 Identities = 44/164 (26%), Positives = 82/164 (50%), Gaps = 2/164 (1%)

Query: 126 SLVQACSDGDVKTVKKLLTEGR-SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184
           S+ Q  + G++  +K+ L +G   V++  + G + L  A + G  E  + LL   A+   
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI 64

Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
              + E + L  A++ G+ +IV LL+    D+N    +G TPL+YA  G H   V  LL 
Sbjct: 65  LAKERE-SALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLA 123

Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNE 288
            GA++    ++G+TP+  A + G+  V +++  +   +   +  
Sbjct: 124 RGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLV 167

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  151 bits (385), Expect = 8e-43
 Identities = 48/223 (21%), Positives = 79/223 (35%), Gaps = 54/223 (24%)

Query: 223 GNTPLMYACAGGHEAVVRVLLECGANVEDH-NENGHTPLMEAASAGHVGVAKILLEYGAG 281
            +  +    A G    ++  L  G N+ +  +E G TPL+ A++ G +   + LLE+GA 
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD 61

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKL 341
            +  + E +ESAL+LA   G+ D+V  LL    D         T L+ A    HV+  + 
Sbjct: 62  PHILAKE-RESALSLASTGGYTDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEA 120

Query: 342 LLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVH 401
           LL  GA                                                    + 
Sbjct: 121 LLARGA---------------------------------------------------DLT 129

Query: 402 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTP 444
              D G + + LA + GY ++ QV+      +    +     P
Sbjct: 130 TEADSGYTPMDLAVALGYRKVQQVIENHILKLFQSNLVPA-DP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  134 bits (341), Expect = 9e-37
 Identities = 41/183 (22%), Positives = 77/183 (42%), Gaps = 30/183 (16%)

Query: 411 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFF 470
           +    + G  +  +  L    N+ ++  +   TPL+ A++ G      E+V         
Sbjct: 6   IHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEI----ETVR-------- 53

Query: 471 PNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA 529
                         L+  GA  +   +E +E+AL+LA  GG+ D+   LL+   +I +  
Sbjct: 54  -------------FLLEWGADPHILAKE-RESALSLASTGGYTDIVGLLLERDVDINIYD 99

Query: 530 ---STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA 586
               TPL+ A +  H++ V  LL  GA +  +  +G T +  A   G+  V  ++ ++  
Sbjct: 100 WNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHIL 159

Query: 587 NLD 589
            L 
Sbjct: 160 KLF 162

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  129 bits (328), Expect = 5e-35
 Identities = 47/196 (23%), Positives = 81/196 (41%), Gaps = 25/196 (12%)

Query: 64  GECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQN 123
           G+   + + A+ G            + + L+         L +    + +       P  
Sbjct: 1   GDSLSIHQLAAQG------------ELDQLKEH-------LRKGDNLVNKPDERGFTP-- 39

Query: 124 ERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 183
              L+ A + G+++TV+ LL  G   H    E ES LSLA + GY ++  +LL    ++ 
Sbjct: 40  ---LIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGYTDIVGLLLERDVDIN 96

Query: 184 DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL 243
                G  TPL+ A     ++ V  L+  GAD+  ++ SG TP+  A A G+  V +V+ 
Sbjct: 97  IYDWNG-GTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIE 155

Query: 244 ECGANVEDHNENGHTP 259
                +   N     P
Sbjct: 156 NHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score =  113 bits (285), Expect = 4e-29
 Identities = 43/274 (15%), Positives = 75/274 (27%), Gaps = 110/274 (40%)

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEM-HTALMEASMDGHVEVAKLLLDSGAQSVS 351
           ++     +G LD ++  L  G +  +K DE   T L+ AS  G +E  + LL+ GA    
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGAD--- 61

Query: 352 AYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL 411
                                                            H    E ES L
Sbjct: 62  ------------------------------------------------PHILAKERESAL 73

Query: 412 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFP 471
           SLA + GY ++  +LL    ++      G  TPL+ A                       
Sbjct: 74  SLASTGGYTDIVGLLLERDVDINIYDWNG-GTPLLYAVRGNH------------------ 114

Query: 472 NDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS 530
                  ++    L+  GA +                             +G        
Sbjct: 115 -------VKCVEALLARGADLTTEA------------------------DSG-------Y 136

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDT 564
           TP+  A   G+ ++ + + +   ++         
Sbjct: 137 TPMDLAVALGYRKVQQVIENHILKLFQSNLVPAD 170

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 77.1 bits (191), Expect = 1e-16
 Identities = 40/228 (17%), Positives = 77/228 (33%), Gaps = 63/228 (27%)

Query: 1   SLVQACSDGDVKTVKKLLTEGR-SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 59
           S+ Q  + G++  +K+ L +G   V++  + G + L  A + G  E  + LL   A+   
Sbjct: 5   SIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHI 64

Query: 60  RGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENP 119
              + E + L  A++ G+             +++  L       L+          + N 
Sbjct: 65  LAKERE-SALSLASTGGY------------TDIVGLL-------LERDV-------DINI 97

Query: 120 RPQNER-SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM 178
              N    L+ A     VK V+ LL  G  +    D G                      
Sbjct: 98  YDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSG---------------------- 135

Query: 179 HANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTP 226
                        TP+  A + G+ ++ +++ NH   +   +     P
Sbjct: 136 ------------YTPMDLAVALGYRKVQQVIENHILKLFQSNLVPADP 171

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A Length = 172

 Score = 41.2 bits (98), Expect = 3e-04
 Identities = 7/31 (22%), Positives = 10/31 (32%)

Query: 709 GDTALTYACENGHTDVADLLLSYGANLRNRT 739
              ++      G  D     L  G NL N+ 
Sbjct: 2   DSLSIHQLAAQGELDQLKEHLRKGDNLVNKP 32

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  188 bits (480), Expect = 9e-56
 Identities = 63/198 (31%), Positives = 103/198 (52%), Gaps = 9/198 (4%)

Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           T E  +LL  A      ++ ++L      V++   +G  TPL  A  +  IEI + LI+ 
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGN-TPLNIAVHNNDIEIAKALIDR 61

Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NVEDHNENGHTPLMEAASAGHVGV 271
           GAD+N Q+S  ++P +YA A G   ++  +L+    ++  HN  G   L+ AA  GH+  
Sbjct: 62  GADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDN 121

Query: 272 AKILLEYG-AGINTHSNEFKESALTLAC-----YKGHLDMVRFLLSAGADQEHKTDEMHT 325
            K+LLE G   I+   N+F  +AL  A       + + D+V+ L+  GADQ  K +   T
Sbjct: 122 VKLLLEDGREDID-FQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRT 180

Query: 326 ALMEASMDGHVEVAKLLL 343
           A+  A+  G+ E++K+L 
Sbjct: 181 AMDYANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  171 bits (436), Expect = 2e-49
 Identities = 42/166 (25%), Positives = 75/166 (45%), Gaps = 6/166 (3%)

Query: 188 KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA 247
                 L  A      ++  +L +    V+   + GNTPL  A       + + L++ GA
Sbjct: 4   YEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGA 63

Query: 248 NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVR 307
           ++   N    +P + A + G   +   +L++        N +  +AL  A  KGH+D V+
Sbjct: 64  DINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVK 123

Query: 308 FLLSAG-ADQEHKTDEMHTALMEASM-----DGHVEVAKLLLDSGA 347
            LL  G  D + + D  +TAL+EA         + ++ KLL+++GA
Sbjct: 124 LLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGA 169

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  162 bits (413), Expect = 2e-46
 Identities = 45/192 (23%), Positives = 77/192 (40%), Gaps = 20/192 (10%)

Query: 500 ETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVH 556
              L  A       V + L      ++   +   TPL  A     +E+ + L+D GA ++
Sbjct: 7   GALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADIN 66

Query: 557 AKTQTGDTALTYACENGHTDVADLLLSYGA------NLDNSTMLIEAAKGGHANVVQLLL 610
            +    D+   YA   G T++   +L +        N      LI AA+ GH + V+LLL
Sbjct: 67  LQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLL 126

Query: 611 DFPRS-VHAKTQTGDTALTYAC-----ENGHTDVADLLLSYGANL-----DNSTMLIEAA 659
           +  R  +  +   G TAL  A         + D+  LL+  GA+         T +  A 
Sbjct: 127 EDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYAN 186

Query: 660 KGGHANVVQLLL 671
           + G+  + ++L 
Sbjct: 187 QKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  144 bits (366), Expect = 9e-40
 Identities = 47/173 (27%), Positives = 80/173 (46%), Gaps = 16/173 (9%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLEL 544
             +++   +    T L +A     +++A  L+  GA+I L  S   +P + A  +G  E+
Sbjct: 29  TYQVDE-VDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEI 87

Query: 545 VRYLLDSGAQ-VHAKTQTGDTALTYACENGHTDVADLLLSYGA------NLDNSTMLIEA 597
           + Y+L      ++   + G  AL  A E GH D   LLL  G       N    T LIEA
Sbjct: 88  LAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEA 147

Query: 598 A-----KGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
                    + ++V+LL++       K  +G TA+ YA + G+T+++ +L  Y
Sbjct: 148 VGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  144 bits (365), Expect = 1e-39
 Identities = 45/212 (21%), Positives = 86/212 (40%), Gaps = 18/212 (8%)

Query: 219 QSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278
           ++      L  A     + V  +L +    V++ +  G+TPL  A     + +AK L++ 
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDR 61

Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA-DQEHKTDEMHTALMEASMDGHVE 337
           GA IN   N   +S    A  +G  +++ ++L     D          AL+ A+  GH++
Sbjct: 62  GADINL-QNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHID 120

Query: 338 VAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYT--YSRSLVQACSDGDVKTVKKLLT 395
             KLLL+ G + +          + +    +   YT       ++  +      VK L+ 
Sbjct: 121 NVKLLLEDGREDI----------DFQ----NDFGYTALIEAVGLREGNQLYQDIVKLLME 166

Query: 396 EGRSVHETTDEGESLLSLACSAGYYELAQVLL 427
            G       + G + +  A   GY E++++L 
Sbjct: 167 NGADQSIKDNSGRTAMDYANQKGYTEISKILA 198

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  122 bits (308), Expect = 5e-32
 Identities = 39/156 (25%), Positives = 73/156 (46%), Gaps = 8/156 (5%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIK 188
           A  + D++  K L+  G  ++      +S    A + G  E+   +L     ++      
Sbjct: 46  AVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRY 105

Query: 189 GECTPLMEAASSGFIEIVRLLINHG-ADVNGQSSSGNTPLMYACAG-----GHEAVVRVL 242
           G    L+ AA  G I+ V+LL+  G  D++ Q+  G T L+ A         ++ +V++L
Sbjct: 106 GG-NALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLL 164

Query: 243 LECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278
           +E GA+    + +G T +  A   G+  ++KIL +Y
Sbjct: 165 MENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  115 bits (290), Expect = 2e-29
 Identities = 48/216 (22%), Positives = 88/216 (40%), Gaps = 40/216 (18%)

Query: 381 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 440
           A      K  + L      V E   EG + L++A      E+A+ L+   A++  +    
Sbjct: 13  ANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSIS 72

Query: 441 ECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP--GAKINAHTEET 498
             +P + A + GR     E ++                      ++      +N H    
Sbjct: 73  -DSPYLYAGAQGRT----EILA---------------------YMLKHATPDLNKHNRY- 105

Query: 499 QETALTLACCGGFLDVADFLLKNG-ANIE----LGASTPLMEAA-----QEGHLELVRYL 548
              AL  A   G +D    LL++G  +I+     G  T L+EA       + + ++V+ L
Sbjct: 106 GGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFG-YTALIEAVGLREGNQLYQDIVKLL 164

Query: 549 LDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSY 584
           +++GA    K  +G TA+ YA + G+T+++ +L  Y
Sbjct: 165 MENGADQSIKDNSGRTAMDYANQKGYTEISKILAQY 200

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  110 bits (277), Expect = 1e-27
 Identities = 31/181 (17%), Positives = 49/181 (27%), Gaps = 57/181 (31%)

Query: 558 KTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVH 617
           KT      L  A +     V ++L                                  V 
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQ----------------------------VD 33

Query: 618 AKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLD 672
                G+T L  A  N   ++A  L+  GA++      + +  + A   G   ++  +L 
Sbjct: 34  EVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYML- 92

Query: 673 FPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYG 732
                                        ++   + G  AL  A E GH D   LLL  G
Sbjct: 93  ----------------------KHAT-PDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDG 129

Query: 733 A 733
            
Sbjct: 130 R 130

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score =  105 bits (265), Expect = 4e-26
 Identities = 47/225 (20%), Positives = 94/225 (41%), Gaps = 36/225 (16%)

Query: 28  TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKL 87
           T E  +LL  A      ++ ++L      V++   +G  TPL  A  +            
Sbjct: 3   TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGN-TPLNIAVHNN----------- 50

Query: 88  ADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERS-LVQACSDGDVKTVKKLLTEG 146
            D E+ + L       +D  A       + N +     S  + A + G  + +  +L   
Sbjct: 51  -DIEIAKAL-------IDRGA-------DINLQNSISDSPYLYAGAQGRTEILAYMLKHA 95

Query: 147 RS-VHETTDEGESLLSLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLMEAA-----S 199
              +++    G + L  A   G+ +  ++LL     +++ +   G  T L+EA      +
Sbjct: 96  TPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGY-TALIEAVGLREGN 154

Query: 200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
             + +IV+LL+ +GAD + + +SG T + YA   G+  + ++L +
Sbjct: 155 QLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILAQ 199

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 59.4 bits (145), Expect = 3e-10
 Identities = 16/116 (13%), Positives = 24/116 (20%), Gaps = 53/116 (45%)

Query: 619 KTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVI 678
           KT      L  A +     V ++L                                    
Sbjct: 2   KTYEVGALLEAANQRDTKKVKEILQDTTYQ------------------------------ 31

Query: 679 GGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                                  V      G+T L  A  N   ++A  L+  GA+
Sbjct: 32  -----------------------VDEVDTEGNTPLNIAVHNNDIEIAKALIDRGAD 64

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis} Length = 201

 Score = 40.9 bits (97), Expect = 5e-04
 Identities = 33/180 (18%), Positives = 58/180 (32%), Gaps = 35/180 (19%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIK 63
           A  + D++  K L+  G  ++      +S    A + G  E+   +L     ++      
Sbjct: 46  AVHNNDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHNRY 105

Query: 64  GECTPLMEAASSGFGK-----LATGDGKLADPEVLRRL--TSSVSCALDEAAAALTRMRN 116
           G    L+ AA  G        L  G     D +       T     AL EA         
Sbjct: 106 GG-NALIPAAEKGHIDNVKLLLEDGR---EDIDFQNDFGYT-----ALIEAV-------- 148

Query: 117 ENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 176
                      ++  +      VK L+  G       + G + +  A   GY E++++L 
Sbjct: 149 ----------GLREGNQLYQDIVKLLMENGADQSIKDNSGRTAMDYANQKGYTEISKILA 198

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  187 bits (477), Expect = 9e-55
 Identities = 54/205 (26%), Positives = 85/205 (41%), Gaps = 9/205 (4%)

Query: 151 ETTDEGESLLSLACSAGYYELAQVLLAMH----ANVEDRGIKGECTPLMEAASSGFIEIV 206
              ++G++ L +A   G       L+ +       ++      + TPL  A  +    +V
Sbjct: 4   RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ-TPLHLAVITTLPSVV 62

Query: 207 RLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA----NVEDHNENGHTPLME 262
           RLL+  GA        G T    AC       +R LL+  A    ++E  N +G T L  
Sbjct: 63  RLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHV 122

Query: 263 AASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDE 322
           A +       ++LLE GA I+    +   S L  A     L MV+ LL  GA+   +   
Sbjct: 123 AVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYS 182

Query: 323 MHTALMEASMDGHVEVAKLLLDSGA 347
             +AL  AS  G + + + L+ SGA
Sbjct: 183 GSSALHSASGRGLLPLVRTLVRSGA 207

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  184 bits (469), Expect = 1e-53
 Identities = 55/227 (24%), Positives = 100/227 (44%), Gaps = 11/227 (4%)

Query: 130 ACSDGDVKTVKKLL----TEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 185
           A   G++  V +L+      GR +    +  ++ L LA       + ++L+   A+    
Sbjct: 16  AVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMAL 75

Query: 186 GIKGECTPLMEAASSGFIEIVRLLINHGA----DVNGQSSSGNTPLMYACAGGHEAVVRV 241
              G  T    A        +R L++  A    D+  ++  G T L  A     +  V++
Sbjct: 76  DRHG-QTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQL 134

Query: 242 LLECGANVEDHN-ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYK 300
           LLE GA+++  + ++G +PL+ A     + + ++LL++GA +N        SAL  A  +
Sbjct: 135 LLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNA-QMYSGSSALHSASGR 193

Query: 301 GHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           G L +VR L+ +GAD   K     T LM A     +++ +      A
Sbjct: 194 GLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  175 bits (446), Expect = 2e-50
 Identities = 53/266 (19%), Positives = 85/266 (31%), Gaps = 67/266 (25%)

Query: 482 SVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQ 538
           ++    G +++ +    ++T L LA       V   L+  GA+         T    A +
Sbjct: 30  NLFQQGGRELDIYNNL-RQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACE 88

Query: 539 EGHLELVRYLLDSGAQ----VHAKTQTGDTALTYACENGHTDVADLLLSYGANL------ 588
                 +R LLDS A     + A+   G TAL  A      +   LLL  GA++      
Sbjct: 89  HRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIK 148

Query: 589 DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
              + LI A +    ++VQLLL    +V+A+  +G +AL  A   G   +   L+  GA+
Sbjct: 149 SGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD 208

Query: 649 LDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQT 708
                                                                   K   
Sbjct: 209 -----------------------------------------------------SSLKNCH 215

Query: 709 GDTALTYACENGHTDVADLLLSYGAN 734
            DT L  A      D+     +  A+
Sbjct: 216 NDTPLMVARSRRVIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  165 bits (421), Expect = 6e-47
 Identities = 52/223 (23%), Positives = 81/223 (36%), Gaps = 44/223 (19%)

Query: 531 TPLMEAAQEGHLELVRYLLD----SGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA 586
           TPL  A  +G+L  V  L++     G ++        T L  A       V  LL++ GA
Sbjct: 11  TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 70

Query: 587 NL-----DNSTMLIEAAKGGHANVVQLLLD----FPRSVHAKTQTGDTALTYACENGHTD 637
           +         T    A +      ++ LLD        + A+   G TAL  A      +
Sbjct: 71  SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 130

Query: 638 VADLLLSYGANL------DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSS 691
              LLL  GA++         + LI A +    ++VQLLL                    
Sbjct: 131 TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLL-------------------- 170

Query: 692 HLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                G  + V+A+  +G +AL  A   G   +   L+  GA+
Sbjct: 171 ---QHG--ANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGAD 208

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  163 bits (415), Expect = 5e-46
 Identities = 66/340 (19%), Positives = 103/340 (30%), Gaps = 109/340 (32%)

Query: 253 NENGHTPLMEAASAGHVGVAKILLEY----GAGINTHSNEFKESALTLACYKGHLDMVRF 308
           +E+G TPL  A   G++     L+      G  ++ + N  +++ L LA       +VR 
Sbjct: 6   DEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIY-NNLRQTPLHLAVITTLPSVVRL 64

Query: 309 LLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPS 368
           L++AGA          TA   A         + LLDS A                     
Sbjct: 65  LVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAP-------------------- 104

Query: 369 SISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLA 428
                                          +     +G + L +A +    E  Q+LL 
Sbjct: 105 ---------------------------GTLDLEARNYDGLTALHVAVNTECQETVQLLLE 137

Query: 429 MHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP- 487
             A+++   IK   +PL+ A  +         V                      +L+  
Sbjct: 138 RGADIDAVDIKSGRSPLIHAVENNSL----SMVQ---------------------LLLQH 172

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRY 547
           GA +NA                           +G       S+ L  A+  G L LVR 
Sbjct: 173 GANVNAQM------------------------YSG-------SSALHSASGRGLLPLVRT 201

Query: 548 LLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
           L+ SGA    K    DT L  A      D+     +  A+
Sbjct: 202 LVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  162 bits (412), Expect = 1e-45
 Identities = 58/265 (21%), Positives = 92/265 (34%), Gaps = 45/265 (16%)

Query: 402 ETTDEGESLLSLACSAGYYELAQVLLAMH----ANVEDRGIKGECTPLMEAASSGRQCNL 457
              ++G++ L +A   G       L+ +       ++      + TPL  A  +      
Sbjct: 4   RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ-TPLHLAVITTLP--- 59

Query: 458 NESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVAD 516
              V                      +L+  GA   A     Q TA  LAC         
Sbjct: 60  -SVVR---------------------LLVTAGASPMALDRHGQ-TAAHLACEHRSPTCLR 96

Query: 517 FLLKNGA----NIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAK-TQTGDTALTY 568
            LL + A    ++E       T L  A      E V+ LL+ GA + A   ++G + L +
Sbjct: 97  ALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIH 156

Query: 569 ACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTG 623
           A EN    +  LLL +GAN+       S+ L  A+  G   +V+ L+        K    
Sbjct: 157 AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHN 216

Query: 624 DTALTYACENGHTDVADLLLSYGAN 648
           DT L  A      D+     +  A+
Sbjct: 217 DTPLMVARSRRVIDILRGKATRPAS 241

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  153 bits (390), Expect = 1e-42
 Identities = 59/245 (24%), Positives = 89/245 (36%), Gaps = 27/245 (11%)

Query: 216 VNGQSSSGNTPLMYACAGGHEAVVRVLLE----CGANVEDHNENGHTPLMEAASAGHVGV 271
                  G+TPL  A   G+   V  L+      G  ++ +N    TPL  A       V
Sbjct: 2   ATRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSV 61

Query: 272 AKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQ----EHKTDEMHTAL 327
            ++L+  GA      +   ++A  LAC       +R LL + A      E +  +  TAL
Sbjct: 62  VRLLVTAGASPMA-LDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTAL 120

Query: 328 MEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDV 387
             A      E  +LLL+ GA              D          +    L+ A  +  +
Sbjct: 121 HVAVNTECQETVQLLLERGA--------------DIDAVDIKSGRS---PLIHAVENNSL 163

Query: 388 KTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLME 447
             V+ LL  G +V+     G S L  A   G   L + L+   A+   +    + TPLM 
Sbjct: 164 SMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHND-TPLMV 222

Query: 448 AASSG 452
           A S  
Sbjct: 223 ARSRR 227

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  148 bits (377), Expect = 7e-41
 Identities = 58/264 (21%), Positives = 104/264 (39%), Gaps = 36/264 (13%)

Query: 26  ETTDEGESLLSLACSAGYYELAQVLLAMH----ANVEDRGIKGECTPLMEAASSGFGKLA 81
              ++G++ L +A   G       L+ +       ++      + TPL  A  +      
Sbjct: 4   RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ-TPLHLAVITT----- 57

Query: 82  TGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERS-LVQACSDGDVKTVK 140
                   P V+R L       +   A       +     ++ ++    AC       ++
Sbjct: 58  -------LPSVVRLL-------VTAGA-------SPMALDRHGQTAAHLACEHRSPTCLR 96

Query: 141 KLLTEG----RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLME 196
            LL         +     +G + L +A +    E  Q+LL   A+++   IK   +PL+ 
Sbjct: 97  ALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIH 156

Query: 197 AASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENG 256
           A  +  + +V+LL+ HGA+VN Q  SG++ L  A   G   +VR L+  GA+    N + 
Sbjct: 157 AVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHN 216

Query: 257 HTPLMEAASAGHVGVAKILLEYGA 280
            TPLM A S   + + +      A
Sbjct: 217 DTPLMVARSRRVIDILRGKATRPA 240

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score =  127 bits (322), Expect = 2e-33
 Identities = 49/197 (24%), Positives = 68/197 (34%), Gaps = 44/197 (22%)

Query: 557 AKTQTGDTALTYACENGHTDVADLLLSY----GANL-----DNSTMLIEAAKGGHANVVQ 607
              + GDT L  A   G+      L++     G  L        T L  A      +VV+
Sbjct: 4   RADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVR 63

Query: 608 LLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA---------NLDNSTMLIEA 658
           LL+    S  A  + G TA   ACE+        LL   A         N D  T L  A
Sbjct: 64  LLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVA 123

Query: 659 AKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAK-TQTGDTALTYAC 717
                   VQLLL+                         + + + A   ++G + L +A 
Sbjct: 124 VNTECQETVQLLLE-------------------------RGADIDAVDIKSGRSPLIHAV 158

Query: 718 ENGHTDVADLLLSYGAN 734
           EN    +  LLL +GAN
Sbjct: 159 ENNSLSMVQLLLQHGAN 175

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A Length = 241

 Score = 96.0 bits (240), Expect = 2e-22
 Identities = 45/250 (18%), Positives = 79/250 (31%), Gaps = 67/250 (26%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL----AMHANVEDR 60
           A        V+ L+T G S       G++   LAC        + LL        ++E R
Sbjct: 53  AVITTLPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEAR 112

Query: 61  GIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPR 120
              G  T L  A ++   +           ++L          L+  A       + +  
Sbjct: 113 NYDGL-TALHVAVNTECQETV---------QLL----------LERGA-------DIDAV 145

Query: 121 PQNER--SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM 178
                   L+ A  +  +  V+ LL  G +V+     G                      
Sbjct: 146 DIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSG---------------------- 183

Query: 179 HANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAV 238
                        + L  A+  G + +VR L+  GAD + ++   +TPLM A +     +
Sbjct: 184 ------------SSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 231

Query: 239 VRVLLECGAN 248
           +R      A+
Sbjct: 232 LRGKATRPAS 241

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  188 bits (479), Expect = 1e-54
 Identities = 58/399 (14%), Positives = 93/399 (23%), Gaps = 131/399 (32%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGAD---VNGQSSSGNTPLMYACAGGHEAVVRVLLECGA 247
            T L  A        +  L+   A    ++ Q+  G T L  A   G  + V  L   GA
Sbjct: 10  DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69

Query: 248 NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVR 307
            V      GHT L  A        A +LL+        +++                   
Sbjct: 70  GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDT------------------ 111

Query: 308 FLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERP 367
             L+   D    T     A +++  +   E      D   Q                   
Sbjct: 112 -YLTQSQDCTPDTSH-APAAVDSQPNPENEEEPRDEDWRLQ------------------- 150

Query: 368 SSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 427
                                           +     +G + L +A      E+ ++L 
Sbjct: 151 --------------------------------LEAENYDGHTPLHVAVIHKDAEMVRLLR 178

Query: 428 AMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP 487
              A++         TPL  A  +         +                      +L+ 
Sbjct: 179 DAGADLNKPEPTCGRTPLHLAVEAQAA----SVLE---------------------LLLK 213

Query: 488 -GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVR 546
            GA   A                            G        TPL  A    +  L R
Sbjct: 214 AGADPTARM------------------------YGG-------RTPLGSALLRPNPILAR 242

Query: 547 YLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYG 585
            L   GA          +  + +  +  +D  D    Y 
Sbjct: 243 LLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  185 bits (473), Expect = 1e-53
 Identities = 60/267 (22%), Positives = 88/267 (32%), Gaps = 56/267 (20%)

Query: 500 ETALTLACCGGFLDVADFLLKNGANIEL------GASTPLMEAAQEGHLELVRYLLDSGA 553
           +TAL LA         DFLL   A  E          T L  AA  G    V  L  +GA
Sbjct: 10  DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGA 69

Query: 554 QVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-------------------NSTML 594
            V    + G TAL  AC       A +LL    +                     ++   
Sbjct: 70  GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAA 129

Query: 595 IEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD---- 650
           +++             D+   + A+   G T L  A  +   ++  LL   GA+L+    
Sbjct: 130 VDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEP 189

Query: 651 --NSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQT 708
               T L  A +   A+V++LLL                         G  +   A+   
Sbjct: 190 TCGRTPLHLAVEAQAASVLELLL-----------------------KAG--ADPTARMYG 224

Query: 709 GDTALTYACENGHTDVADLLLSYGANL 735
           G T L  A    +  +A LL ++GA  
Sbjct: 225 GRTPLGSALLRPNPILARLLRAHGAPE 251

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  183 bits (467), Expect = 7e-53
 Identities = 48/235 (20%), Positives = 74/235 (31%), Gaps = 18/235 (7%)

Query: 130 ACSDGDVKTVKKLLTEG---RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           A        +  LL        +    D G++ L LA   G     + L A  A V    
Sbjct: 16  AVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAE 75

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTP--------------LMYACA 232
             G  T L  A          +L+         +S                    + +  
Sbjct: 76  RGGH-TALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQP 134

Query: 233 GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKES 292
                      +    +E  N +GHTPL  A       + ++L + GA +N        +
Sbjct: 135 NPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRT 194

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
            L LA       ++  LL AGAD   +     T L  A +  +  +A+LL   GA
Sbjct: 195 PLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  176 bits (450), Expect = 2e-50
 Identities = 61/372 (16%), Positives = 102/372 (27%), Gaps = 98/372 (26%)

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEH---KTDEMHTALMEASMDGHVEV 338
           +  +  E  ++AL LA    H   + FLL   A  E+   + D   TAL  A++ G    
Sbjct: 1   VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEAST 60

Query: 339 AKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGR 398
            + L  +GA                                                   
Sbjct: 61  VEKLYAAGA--------------------------------------------------- 69

Query: 399 SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLN 458
            V      G + L LAC    +  A VLL    +                 +  + C  +
Sbjct: 70  GVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTY-------LTQSQDCTPD 122

Query: 459 ESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFL 518
            S +  A       +                ++ A   +   T L +A      ++   L
Sbjct: 123 TSHAPAAVDSQPNPENEEEPR----DEDWRLQLEAENYD-GHTPLHVAVIHKDAEMVRLL 177

Query: 519 LKNGANI----ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGH 574
              GA++         TPL  A +     ++  LL +GA   A+   G T L  A    +
Sbjct: 178 RDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPN 237

Query: 575 TDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENG 634
             +A LL ++GA                                      +  + +  + 
Sbjct: 238 PILARLLRAHGAP----------------------------EPEDGGDKLSPCSSSGSDS 269

Query: 635 HTDVADLLLSYG 646
            +D  D    Y 
Sbjct: 270 DSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  173 bits (440), Expect = 4e-49
 Identities = 62/326 (19%), Positives = 91/326 (27%), Gaps = 70/326 (21%)

Query: 151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGE--CTPLMEAASSGFIEIVRL 208
             T++G++ L LA    +      LL   A  E   ++ +   T L  AA  G    V  
Sbjct: 4   YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEK 63

Query: 209 LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV-------------EDHNEN 255
           L   GA V      G+T L  AC         VLL+   +              +   + 
Sbjct: 64  LYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDT 123

Query: 256 GHTPLMEAASAGHVG-VAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
            H P    +             ++   +    N    + L +A      +MVR L  AGA
Sbjct: 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLE-AENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182

Query: 315 DQEHKT-DEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYT 373
           D          T L  A       V +LLL +GA                          
Sbjct: 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGA-------------------------- 216

Query: 374 YSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV 433
                                            G + L  A       LA++L A  A  
Sbjct: 217 -------------------------DPTARMYGGRTPLGSALLRPNPILARLLRAHGAPE 251

Query: 434 EDRGIKGECTPLMEAASSGRQCNLNE 459
            + G     +P   + S     N +E
Sbjct: 252 PEDGGDK-LSPCSSSGSDSDSDNRDE 276

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  171 bits (435), Expect = 2e-48
 Identities = 46/229 (20%), Positives = 80/229 (34%), Gaps = 15/229 (6%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR---- 185
           A   G+  TV+KL   G  V      G + L LAC    +  A VLL    +        
Sbjct: 52  AAILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDT 111

Query: 186 ---------GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE 236
                             +++  +   E      +    +  ++  G+TPL  A      
Sbjct: 112 YLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDA 171

Query: 237 AVVRVLLECGANV-EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALT 295
            +VR+L + GA++ +     G TPL  A  A    V ++LL+ GA           + L 
Sbjct: 172 EMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA-RMYGGRTPLG 230

Query: 296 LACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344
            A  + +  + R L + GA +     +  +    +  D   +      +
Sbjct: 231 SALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDE 279

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  165 bits (421), Expect = 2e-46
 Identities = 63/420 (15%), Positives = 93/420 (22%), Gaps = 145/420 (34%)

Query: 317 EHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSR 376
            + T++  TAL  A +  H      LL   A                             
Sbjct: 3   GYVTEDGDTALHLAVIHQHEPFLDFLLGFSA----------------------------- 33

Query: 377 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 436
                                  +    D G++ L LA   G     + L A  A V   
Sbjct: 34  -------------------GHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVA 74

Query: 437 GIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTE 496
              G  T L  A                 +        + +       L         T 
Sbjct: 75  ERGGH-TALHLACRVRAH----TCACVLLQPRPSHPRDASDTY-----LTQSQDCTPDTS 124

Query: 497 ETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGA 553
                A   +      +           +E       TPL  A      E+VR L D+GA
Sbjct: 125 HA--PAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182

Query: 554 QVHAKTQT-GDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDF 612
            ++    T G T L  A E     V +LLL  GA+                         
Sbjct: 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGAD------------------------- 217

Query: 613 PRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLD 672
                A+   G T L  A    +  +A LL ++GA                         
Sbjct: 218 ---PTARMYGGRTPLGSALLRPNPILARLLRAHGAP------------------------ 250

Query: 673 FPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYG 732
                                                 +  + +  +  +D  D    Y 
Sbjct: 251 -----------------------------EPEDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score =  163 bits (416), Expect = 1e-45
 Identities = 52/279 (18%), Positives = 89/279 (31%), Gaps = 17/279 (6%)

Query: 5   ACSDGDVKTVKKLLTEG---RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           A        +  LL        +    D G++ L LA   G     + L A  A V    
Sbjct: 16  AVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAE 75

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSS-VSCALDEAAAALTRMRNENPR 120
             G  T L  A                       L     S   D +   LT+ ++  P 
Sbjct: 76  RGGH-TALHLACRVRA------------HTCACVLLQPRPSHPRDASDTYLTQSQDCTPD 122

Query: 121 PQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 180
             +  + V +  + + +   +       +     +G + L +A      E+ ++L    A
Sbjct: 123 TSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA 182

Query: 181 NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR 240
           ++         TPL  A  +    ++ LL+  GAD   +   G TPL  A    +  + R
Sbjct: 183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILAR 242

Query: 241 VLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
           +L   GA   +   +  +P   + S           EY 
Sbjct: 243 LLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGDEYD 281

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 91.5 bits (228), Expect = 2e-20
 Identities = 31/183 (16%), Positives = 41/183 (22%), Gaps = 78/183 (42%)

Query: 557 AKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSV 616
             T+ GDTAL  A  + H    D LL + A                             +
Sbjct: 4   YVTEDGDTALHLAVIHQHEPFLDFLLGFSAG-------------------------HEYL 38

Query: 617 HAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRS 676
             +   G TAL  A   G     + L + GA                             
Sbjct: 39  DLQNDLGQTALHLAAILGEASTVEKLYAAGAG---------------------------- 70

Query: 677 VIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANLR 736
                                    V    + G TAL  AC       A +LL    +  
Sbjct: 71  -------------------------VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHP 105

Query: 737 NRT 739
              
Sbjct: 106 RDA 108

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D Length = 282

 Score = 48.3 bits (116), Expect = 4e-06
 Identities = 25/176 (14%), Positives = 49/176 (27%), Gaps = 27/176 (15%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
            V +  + + +   +       +     +G + L +A      E+ ++L    A++    
Sbjct: 129 AVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPE 188

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
                TPL  A  +    +          E+L          L   A       +   R 
Sbjct: 189 PTCGRTPLHLAVEAQAASVL---------ELL----------LKAGA-------DPTARM 222

Query: 122 QNERS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 176
              R+ L  A    +    + L   G    E   +  S  S + S    +      
Sbjct: 223 YGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSPCSSSGSDSDSDNRDEGD 278

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  186 bits (475), Expect = 3e-54
 Identities = 56/224 (25%), Positives = 99/224 (44%), Gaps = 4/224 (1%)

Query: 126 SLVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVED 184
           +      +     +   + +G S+H  TD  GE+ L LA      + A+ LL   A+   
Sbjct: 26  TGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANI 85

Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGA-DVNGQSSSGNTPLMYACAGGHEAVVRVLL 243
           +   G  TPL  A S+    + ++LI + A D++ +   G TPL+ A     E ++  L+
Sbjct: 86  QDNMGR-TPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLI 144

Query: 244 ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHL 303
              A+V   ++ G + L  AA+  +V  A +LL+ GA  +   N  +E+ L LA  +G  
Sbjct: 145 NSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNREETPLFLAAREGSY 203

Query: 304 DMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           +  + LL   A+++            A    H ++ +LL     
Sbjct: 204 ETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHH 247

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  182 bits (464), Expect = 1e-52
 Identities = 49/193 (25%), Positives = 88/193 (45%), Gaps = 2/193 (1%)

Query: 156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGAD 215
           G    +         +    +   A++ ++  +   T L  AA     +  + L+   AD
Sbjct: 23  GLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASAD 82

Query: 216 VNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NVEDHNENGHTPLMEAASAGHVGVAKI 274
            N Q + G TPL  A +   + V ++L+   A +++    +G TPL+ AA     G+ + 
Sbjct: 83  ANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLED 142

Query: 275 LLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDG 334
           L+   A +N   ++  +SAL  A    ++D    LL  GA+++ + +   T L  A+ +G
Sbjct: 143 LINSHADVNA-VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG 201

Query: 335 HVEVAKLLLDSGA 347
             E AK+LLD  A
Sbjct: 202 SYETAKVLLDHFA 214

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  176 bits (450), Expect = 8e-51
 Identities = 67/312 (21%), Positives = 99/312 (31%), Gaps = 74/312 (23%)

Query: 432 NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKI 491
           +V  RG  G  TPLM A+ SG       S                     S  +  GA +
Sbjct: 2   DVNVRGPDGF-TPLMIASCSGGGLETGNSEEEEDAPAV-----------ISDFIYQGASL 49

Query: 492 NAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYL 548
           +  T+ T ETAL LA      D A  LL+  A+  +  +   TPL  A       + + L
Sbjct: 50  HNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQIL 109

Query: 549 LDSGAQ-VHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQ 607
           + + A  + A+   G T L  A       + + L++  A+                    
Sbjct: 110 IRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHAD-------------------- 149

Query: 608 LLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGG 662
                   V+A    G +AL +A    + D A +LL  GAN         T L  AA+ G
Sbjct: 150 --------VNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREG 201

Query: 663 HANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHT 722
                ++LL                            +               A E  H 
Sbjct: 202 SYETAKVLL-----------------------DHF--ANRDITDHMDRLPRDIAQERMHH 236

Query: 723 DVADLLLSYGAN 734
           D+  LL     +
Sbjct: 237 DIVRLLDLEHHH 248

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  172 bits (439), Expect = 3e-49
 Identities = 65/267 (24%), Positives = 102/267 (38%), Gaps = 35/267 (13%)

Query: 181 NVEDRGIKGECTPLMEAASSGF-------------IEIVRLLINHGADV-NGQSSSGNTP 226
           +V  RG  G  TPLM A+ SG                ++   I  GA + N    +G T 
Sbjct: 2   DVNVRGPDGF-TPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETA 60

Query: 227 LMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG-INTH 285
           L  A         + LLE  A+    +  G TPL  A SA   GV +IL+   A  ++  
Sbjct: 61  LHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDA- 119

Query: 286 SNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS 345
                 + L LA       M+  L+++ AD     D   +AL  A+   +V+ A +LL +
Sbjct: 120 RMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKN 179

Query: 346 GAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTD 405
           GA             + +  R      T    L  A  +G  +T K LL    +   T  
Sbjct: 180 GAN-----------KDMQNNR----EET---PLFLAAREGSYETAKVLLDHFANRDITDH 221

Query: 406 EGESLLSLACSAGYYELAQVLLAMHAN 432
                  +A    ++++ ++L   H +
Sbjct: 222 MDRLPRDIAQERMHHDIVRLLDLEHHH 248

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  166 bits (424), Expect = 4e-47
 Identities = 73/262 (27%), Positives = 107/262 (40%), Gaps = 17/262 (6%)

Query: 56  NVEDRGIKGECTPLMEAASSGFGKLATGDGKLAD-PEVLRRLTSSVSCALDEAAAALTRM 114
           +V  RG  G  TPLM A+ SG G       +  D P V+               A+L   
Sbjct: 2   DVNVRGPDGF-TPLMIASCSGGGLETGNSEEEEDAPAVISDFIY--------QGASLHNQ 52

Query: 115 RNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQV 174
            +       E +L  A         K+LL      +   + G + L  A SA    + Q+
Sbjct: 53  TDRT----GETALHLAARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQI 108

Query: 175 LLAMHA-NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAG 233
           L+   A +++ R   G  TPL+ AA      ++  LIN  ADVN     G + L +A A 
Sbjct: 109 LIRNRATDLDARMHDGT-TPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAV 167

Query: 234 GHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESA 293
            +     VLL+ GAN +  N    TPL  AA  G    AK+LL++ A  +  ++      
Sbjct: 168 NNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRD-ITDHMDRLP 226

Query: 294 LTLACYKGHLDMVRFLLSAGAD 315
             +A  + H D+VR L      
Sbjct: 227 RDIAQERMHHDIVRLLDLEHHH 248

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  157 bits (399), Expect = 9e-44
 Identities = 53/255 (20%), Positives = 88/255 (34%), Gaps = 36/255 (14%)

Query: 407 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYAR 466
           G    +         +    +   A++ ++  +   T L  AA   R             
Sbjct: 23  GLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR------------- 69

Query: 467 HDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGA-N 524
                         A+  L+   A  N   +    T L  A       V   L++N A +
Sbjct: 70  ------------SDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIRNRATD 116

Query: 525 IELGA---STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLL 581
           ++      +TPL+ AA+     ++  L++S A V+A    G +AL +A    + D A +L
Sbjct: 117 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVL 176

Query: 582 LSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHT 636
           L  GAN         T L  AA+ G     ++LLD   +              A E  H 
Sbjct: 177 LKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHH 236

Query: 637 DVADLLLSYGANLDN 651
           D+  LL     +  +
Sbjct: 237 DIVRLLDLEHHHHHH 251

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  153 bits (389), Expect = 3e-42
 Identities = 71/349 (20%), Positives = 110/349 (31%), Gaps = 105/349 (30%)

Query: 248 NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVR 307
           +V     +G TPLM A+ +G                                +    ++ 
Sbjct: 2   DVNVRGPDGFTPLMIASCSGG---------------------GLETGNSEEEEDAPAVIS 40

Query: 308 FLLSAGADQEHKTDEM-HTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCER 366
             +  GA   ++TD    TAL  A+     + AK LL++ A                   
Sbjct: 41  DFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA------------------- 81

Query: 367 PSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVL 426
                                             +   + G + L  A SA    + Q+L
Sbjct: 82  --------------------------------DANIQDNMGRTPLHAAVSADAQGVFQIL 109

Query: 427 LAMHA-NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVIL 485
           +   A +++ R   G  TPL+ AA    +      +                       L
Sbjct: 110 IRNRATDLDARMHDGT-TPLILAARLAVE----GMLE---------------------DL 143

Query: 486 IP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGH 541
           I   A +NA  +   ++AL  A     +D A  LLKNGAN ++  +   TPL  AA+EG 
Sbjct: 144 INSHADVNAVDDL-GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGS 202

Query: 542 LELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
            E  + LLD  A               A E  H D+  LL     +  +
Sbjct: 203 YETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDLEHHHHHH 251

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score =  141 bits (357), Expect = 6e-38
 Identities = 47/257 (18%), Positives = 92/257 (35%), Gaps = 29/257 (11%)

Query: 31  GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADP 90
           G    +         +    +   A++ ++  +   T L  AA                 
Sbjct: 23  GLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYS------------RS 70

Query: 91  EVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERS-LVQACSDGDVKTVKKLLTEGRS- 148
           +  +RL       L+ +A       + N +    R+ L  A S       + L+    + 
Sbjct: 71  DAAKRL-------LEASA-------DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATD 116

Query: 149 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRL 208
           +     +G + L LA       + + L+  HA+V      G+ + L  AA+   ++   +
Sbjct: 117 LDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGK-SALHWAAAVNNVDAAVV 175

Query: 209 LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH 268
           L+ +GA+ + Q++   TPL  A   G     +VLL+  AN +  +     P   A    H
Sbjct: 176 LLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMH 235

Query: 269 VGVAKILLEYGAGINTH 285
             + ++L       + H
Sbjct: 236 HDIVRLLDLEHHHHHHH 252

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A Length = 253

 Score = 80.2 bits (199), Expect = 6e-17
 Identities = 50/215 (23%), Positives = 75/215 (34%), Gaps = 30/215 (13%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIK 63
           A         K+LL      +   + G + L  A SA    + Q+L+   A +++ R   
Sbjct: 64  AARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD 123

Query: 64  GECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQN 123
           G  TPL+ AA      +          E L          ++  A       + N     
Sbjct: 124 GT-TPLILAARLAVEGML---------EDL----------INSHA-------DVNAVDDL 156

Query: 124 ERS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV 182
            +S L  A +  +V     LL  G +     +  E+ L LA   G YE A+VLL   AN 
Sbjct: 157 GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 216

Query: 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVN 217
           +         P   A      +IVRLL       +
Sbjct: 217 DITDHMDR-LPRDIAQERMHHDIVRLLDLEHHHHH 250

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  184 bits (470), Expect = 5e-54
 Identities = 56/213 (26%), Positives = 98/213 (46%), Gaps = 4/213 (1%)

Query: 138 TVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLME 196
            +   + +G S+H  TD  GE+ L LA      + A+ LL   A+   +   G  TPL  
Sbjct: 6   VISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGR-TPLHA 64

Query: 197 AASSGFIEIVRLLINHGA-DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNEN 255
           A S+    + ++LI + A D++ +   G TPL+ A     E ++  L+   A+V   ++ 
Sbjct: 65  AVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDL 124

Query: 256 GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD 315
           G + L  AA+  +V  A +LL+ GA  +   N  +E+ L LA  +G  +  + LL   A+
Sbjct: 125 GKSALHWAAAVNNVDAAVVLLKNGANKD-MQNNREETPLFLAAREGSYETAKVLLDHFAN 183

Query: 316 QEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQ 348
           ++            A    H ++ +LL +    
Sbjct: 184 RDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  179 bits (456), Expect = 6e-52
 Identities = 48/183 (26%), Positives = 86/183 (46%), Gaps = 2/183 (1%)

Query: 166 AGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNT 225
                +    +   A++ ++  +   T L  AA     +  + L+   AD N Q + G T
Sbjct: 1   GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT 60

Query: 226 PLMYACAGGHEAVVRVLLECGA-NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINT 284
           PL  A +   + V ++L+   A +++    +G TPL+ AA     G+ + L+   A +N 
Sbjct: 61  PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA 120

Query: 285 HSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344
             ++  +SAL  A    ++D    LL  GA+++ + +   T L  A+ +G  E AK+LLD
Sbjct: 121 -VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLD 179

Query: 345 SGA 347
             A
Sbjct: 180 HFA 182

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  177 bits (451), Expect = 2e-51
 Identities = 52/241 (21%), Positives = 81/241 (33%), Gaps = 40/241 (16%)

Query: 509 GGFLDVADFLLKNGANIELGA----STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDT 564
           G    V    +  GA++         T L  AA+    +  + LL++ A  + +   G T
Sbjct: 1   GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRT 60

Query: 565 ALTYACENGHTDVADLLLSYGA------NLDNSTMLIEAAKGGHANVVQLLLDFPRSVHA 618
            L  A       V  +L+   A        D +T LI AA+     +++ L++    V+A
Sbjct: 61  PLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNA 120

Query: 619 KTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDF 673
               G +AL +A    + D A +LL  GAN         T L  AA+ G     ++LL  
Sbjct: 121 VDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLL-- 178

Query: 674 PRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGA 733
                                     +               A E  H D+  LL  Y  
Sbjct: 179 ---------------------DHF--ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNL 215

Query: 734 N 734
            
Sbjct: 216 V 216

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  159 bits (405), Expect = 6e-45
 Identities = 54/187 (28%), Positives = 81/187 (43%), Gaps = 3/187 (1%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIK 188
           A         K+LL      +   + G + L  A SA    + Q+L+   A +++ R   
Sbjct: 32  AARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD 91

Query: 189 GECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN 248
           G  TPL+ AA      ++  LIN  ADVN     G + L +A A  +     VLL+ GAN
Sbjct: 92  GT-TPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGAN 150

Query: 249 VEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRF 308
            +  N    TPL  AA  G    AK+LL++ A  +  ++        +A  + H D+VR 
Sbjct: 151 KDMQNNREETPLFLAAREGSYETAKVLLDHFANRDI-TDHMDRLPRDIAQERMHHDIVRL 209

Query: 309 LLSAGAD 315
           L      
Sbjct: 210 LDEYNLV 216

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  158 bits (402), Expect = 2e-44
 Identities = 53/237 (22%), Positives = 86/237 (36%), Gaps = 23/237 (9%)

Query: 201 GFIEIVRLLINHGADV-NGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTP 259
               ++   I  GA + N    +G T L  A         + LLE  A+    +  G TP
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGRTP 61

Query: 260 LMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHK 319
           L  A SA   GV +IL+   A           + L LA       M+  L+++ AD    
Sbjct: 62  LHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAV 121

Query: 320 TDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPN--DKCERPSSISYTYSRS 377
            D   +AL  A+   +V+ A +LL +GA             +  +  E       T    
Sbjct: 122 DDLGKSALHWAAAVNNVDAAVVLLKNGAN-----------KDMQNNREE------T---P 161

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 434
           L  A  +G  +T K LL    +   T         +A    ++++ ++L   +    
Sbjct: 162 LFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS 218

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  153 bits (390), Expect = 7e-43
 Identities = 53/242 (21%), Positives = 85/242 (35%), Gaps = 36/242 (14%)

Query: 417 AGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSV 476
                +    +   A++ ++  +   T L  AA   R                       
Sbjct: 1   GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSR----------------------- 37

Query: 477 NGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGA-NIELGA---ST 531
               A+  L+   A  N   +    T L  A       V   L++N A +++      +T
Sbjct: 38  --SDAAKRLLEASADANI-QDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTT 94

Query: 532 PLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL--- 588
           PL+ AA+     ++  L++S A V+A    G +AL +A    + D A +LL  GAN    
Sbjct: 95  PLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQ 154

Query: 589 --DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
                T L  AA+ G     ++LLD   +              A E  H D+  LL  Y 
Sbjct: 155 NNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYN 214

Query: 647 AN 648
             
Sbjct: 215 LV 216

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  138 bits (350), Expect = 2e-37
 Identities = 64/293 (21%), Positives = 95/293 (32%), Gaps = 84/293 (28%)

Query: 301 GHLDMVRFLLSAGADQEHKTDEM-HTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFF 359
               ++   +  GA   ++TD    TAL  A+     + AK LL++ A            
Sbjct: 2   DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA------------ 49

Query: 360 PNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY 419
                                                    +   + G + L  A SA  
Sbjct: 50  ---------------------------------------DANIQDNMGRTPLHAAVSADA 70

Query: 420 YELAQVLLAMHA-NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNG 478
             + Q+L+   A +++ R   G  TPL+ AA    +      +                 
Sbjct: 71  QGVFQILIRNRATDLDARMHDGT-TPLILAARLAVE----GMLE---------------- 109

Query: 479 LQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLM 534
                 LI   A +NA  +   ++AL  A     +D A  LLKNGAN ++      TPL 
Sbjct: 110 -----DLINSHADVNAVDDL-GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLF 163

Query: 535 EAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
            AA+EG  E  + LLD  A               A E  H D+  LL  Y   
Sbjct: 164 LAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLV 216

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score =  137 bits (349), Expect = 3e-37
 Identities = 47/246 (19%), Positives = 90/246 (36%), Gaps = 29/246 (11%)

Query: 41  AGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSV 100
                +    +   A++ ++  +   T L  AA                 +  +RL    
Sbjct: 1   GDAPAVISDFIYQGASLHNQTDRTGETALHLAARYS------------RSDAAKRL---- 44

Query: 101 SCALDEAAAALTRMRNENPRPQNERS-LVQACSDGDVKTVKKLLTEG-RSVHETTDEGES 158
              L+ +A       + N +    R+ L  A S       + L+      +     +G +
Sbjct: 45  ---LEASA-------DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTT 94

Query: 159 LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNG 218
            L LA       + + L+  HA+V      G+ + L  AA+   ++   +L+ +GA+ + 
Sbjct: 95  PLILAARLAVEGMLEDLINSHADVNAVDDLGK-SALHWAAAVNNVDAAVVLLKNGANKDM 153

Query: 219 QSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278
           Q++   TPL  A   G     +VLL+  AN +  +     P   A    H  + ++L EY
Sbjct: 154 QNNREETPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEY 213

Query: 279 GAGINT 284
               + 
Sbjct: 214 NLVRSP 219

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A Length = 223

 Score = 79.4 bits (197), Expect = 6e-17
 Identities = 50/215 (23%), Positives = 76/215 (35%), Gaps = 30/215 (13%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIK 63
           A         K+LL      +   + G + L  A SA    + Q+L+   A +++ R   
Sbjct: 32  AARYSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHD 91

Query: 64  GECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQN 123
           G  TPL+ AA      +          E L          ++  A       + N     
Sbjct: 92  GT-TPLILAARLAVEGML---------EDL----------INSHA-------DVNAVDDL 124

Query: 124 ERS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV 182
            +S L  A +  +V     LL  G +     +  E+ L LA   G YE A+VLL   AN 
Sbjct: 125 GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHFANR 184

Query: 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVN 217
           +         P   A      +IVRLL  +    +
Sbjct: 185 DITDHMDR-LPRDIAQERMHHDIVRLLDEYNLVRS 218

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  181 bits (461), Expect = 1e-52
 Identities = 56/210 (26%), Positives = 88/210 (41%), Gaps = 11/210 (5%)

Query: 150 HETTDEGESLLSLACSAGY----YELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEI 205
            + T++G+S L LA          E+ + +    A +  +    + TPL  A  +   EI
Sbjct: 2   QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ-TPLHLAVITNQPEI 60

Query: 206 VRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDH------NENGHTP 259
              L+  G D   +   GNTPL  AC  G  A V VL +       H      N NGHT 
Sbjct: 61  AEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTC 120

Query: 260 LMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHK 319
           L  A+  G++G+ ++L+  GA +N        +AL LA    + D+V  LL  GAD    
Sbjct: 121 LHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRV 180

Query: 320 TDEMHTALMEASMDGHVEVAKLLLDSGAQS 349
           T + ++            + + L     ++
Sbjct: 181 TYQGYSPYQLTWGRPSTRIQQQLGQLTLEN 210

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  156 bits (396), Expect = 2e-43
 Identities = 45/248 (18%), Positives = 74/248 (29%), Gaps = 60/248 (24%)

Query: 500 ETALTLACCGG----FLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSG 552
           ++ L LA         ++V   +  + A +    +   TPL  A      E+   LL +G
Sbjct: 9   DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 68

Query: 553 AQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDF 612
                +   G+T L  ACE G      +L                               
Sbjct: 69  CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL---------------------- 106

Query: 613 PRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL------DNSTMLIEAAKGGHANV 666
              + A    G T L  A  +G+  + +LL+S GA++      +  T L  A    + ++
Sbjct: 107 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 166

Query: 667 VQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVAD 726
           V LLL                         G  + V+  T  G +          T +  
Sbjct: 167 VSLLL-----------------------KCG--ADVNRVTYQGYSPYQLTWGRPSTRIQQ 201

Query: 727 LLLSYGAN 734
            L      
Sbjct: 202 QLGQLTLE 209

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  153 bits (390), Expect = 1e-42
 Identities = 42/208 (20%), Positives = 77/208 (37%), Gaps = 9/208 (4%)

Query: 139 VKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA 198
           ++++  +   ++   +  ++ L LA      E+A+ LL    + E R  +G  TPL  A 
Sbjct: 28  IRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGN-TPLHLAC 86

Query: 199 SSGFIEIVRLLINHGAD------VNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV-ED 251
             G +  V +L            +   + +G+T L  A   G+  +V +L+  GA+V   
Sbjct: 87  EQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQ 146

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
              NG T L  A    +  +  +LL+ GA +N        S   L   +    + + L  
Sbjct: 147 EPCNGRTALHLAVDLQNPDLVSLLLKCGADVNR-VTYQGYSPYQLTWGRPSTRIQQQLGQ 205

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVA 339
              +      E        +     E  
Sbjct: 206 LTLENLQMLPESEDEESYDTESEFTEFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  148 bits (377), Expect = 7e-41
 Identities = 54/272 (19%), Positives = 83/272 (30%), Gaps = 62/272 (22%)

Query: 191 CTPLMEAASSG----FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
            + L  A         +E++R +    A +N Q++   TPL  A       +   LL  G
Sbjct: 9   DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 68

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHS-----NEFKESALTLACYKG 301
            + E  +  G+TPL  A   G +    +L +     + HS     N    + L LA   G
Sbjct: 69  CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG 128

Query: 302 HLDMVRFLLSAGADQEHKTDEM-HTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFP 360
           +L +V  L+S GAD   +      TAL  A    + ++  LLL  GA             
Sbjct: 129 YLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGA------------- 175

Query: 361 NDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYY 420
                                                  V+  T +G S   L       
Sbjct: 176 --------------------------------------DVNRVTYQGYSPYQLTWGRPST 197

Query: 421 ELAQVLLAMHANVEDRGIKGECTPLMEAASSG 452
            + Q L  +         + E         S 
Sbjct: 198 RIQQQLGQLTLENLQMLPESE-DEESYDTESE 228

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  143 bits (362), Expect = 8e-39
 Identities = 48/222 (21%), Positives = 74/222 (33%), Gaps = 36/222 (16%)

Query: 442 CTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQET 501
            + L  A     +    E +                           A +N      Q T
Sbjct: 9   DSFLHLAIIHEEKALTMEVIRQVKGD--------------------LAFLNFQNNLQQ-T 47

Query: 502 ALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVRYLLDSGA----- 553
            L LA      ++A+ LL  G + EL     +TPL  A ++G L  V  L  S       
Sbjct: 48  PLHLAVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLH 107

Query: 554 -QVHAKTQTGDTALTYACENGHTDVADLLLSYGANL------DNSTMLIEAAKGGHANVV 606
             + A    G T L  A  +G+  + +LL+S GA++      +  T L  A    + ++V
Sbjct: 108 SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLV 167

Query: 607 QLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
            LLL     V+  T  G +          T +   L      
Sbjct: 168 SLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 209

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  136 bits (344), Expect = 2e-36
 Identities = 43/183 (23%), Positives = 64/183 (34%), Gaps = 7/183 (3%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI-- 187
           A      +  + LL  G         G + L LAC  G      VL           I  
Sbjct: 52  AVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILK 111

Query: 188 ---KGECTPLMEAASSGFIEIVRLLINHGADVNGQ-SSSGNTPLMYACAGGHEAVVRVLL 243
                  T L  A+  G++ IV LL++ GADVN Q   +G T L  A    +  +V +LL
Sbjct: 112 ATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLL 171

Query: 244 ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHL 303
           +CGA+V      G++P           + + L +          E  E   +        
Sbjct: 172 KCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPE-SEDEESYDTESEFT 230

Query: 304 DMV 306
           +  
Sbjct: 231 EFT 233

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  126 bits (319), Expect = 5e-33
 Identities = 52/362 (14%), Positives = 82/362 (22%), Gaps = 140/362 (38%)

Query: 287 NEFKESALTLACYKGH----LDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLL 342
            E  +S L LA         ++++R +    A    + +   T L  A +    E+A+ L
Sbjct: 5   TEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEAL 64

Query: 343 LDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHE 402
           L +G                                                        
Sbjct: 65  LGAGC---------------------------------------------------DPEL 73

Query: 403 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVS 462
               G + L LAC  G      VL                              L     
Sbjct: 74  RDFRGNTPLHLACEQGCLASVGVLTQSCTTPH------------------LHSILKA--- 112

Query: 463 AYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNG 522
                       + NG                      T L LA   G+L + + L+  G
Sbjct: 113 -----------TNYNG---------------------HTCLHLASIHGYLGIVELLVSLG 140

Query: 523 ANIE----LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVA 578
           A++         T L  A    + +LV  LL  GA V+  T  G +          T + 
Sbjct: 141 ADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQ 200

Query: 579 DLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDV 638
             L                                          +   +Y  E+  T+ 
Sbjct: 201 QQLGQLTLE----------------------------NLQMLPESEDEESYDTESEFTEF 232

Query: 639 AD 640
            +
Sbjct: 233 TE 234

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score =  115 bits (291), Expect = 2e-29
 Identities = 47/254 (18%), Positives = 82/254 (32%), Gaps = 36/254 (14%)

Query: 25  HETTDEGESLLSLACSAGY----YELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL 80
            + T++G+S L LA          E+ + +    A +  +    + TPL  A  +     
Sbjct: 2   QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ-TPLHLAVITN---- 56

Query: 81  ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVK 140
                    PE+   L           A     +R+          L  AC  G + +V 
Sbjct: 57  --------QPEIAEALLG---------AGCDPELRDFR----GNTPLHLACEQGCLASVG 95

Query: 141 KLLTEG------RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPL 194
            L            +  T   G + L LA   GY  + ++L+++ A+V  +      T L
Sbjct: 96  VLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTAL 155

Query: 195 MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNE 254
             A      ++V LL+  GADVN  +  G +P           + + L +          
Sbjct: 156 HLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLENLQMLP 215

Query: 255 NGHTPLMEAASAGH 268
                      +  
Sbjct: 216 ESEDEESYDTESEF 229

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 79.5 bits (197), Expect = 7e-17
 Identities = 22/127 (17%), Positives = 32/127 (25%), Gaps = 34/127 (26%)

Query: 617 HAKTQTGDTALTYACENGHT----DVADLLLSYGANL-----DNSTMLIEAAKGGHANVV 667
              T+ GD+ L  A  +       +V   +    A L        T L  A       + 
Sbjct: 2   QQLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIA 61

Query: 668 QLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADL 727
           + LL                         G       +   G+T L  ACE G      +
Sbjct: 62  EALL-----------------------GAG--CDPELRDFRGNTPLHLACEQGCLASVGV 96

Query: 728 LLSYGAN 734
           L      
Sbjct: 97  LTQSCTT 103

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E Length = 236

 Score = 58.7 bits (143), Expect = 8e-10
 Identities = 33/235 (14%), Positives = 48/235 (20%), Gaps = 71/235 (30%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI-- 62
           A      +  + LL  G         G + L LAC  G      VL           I  
Sbjct: 52  AVITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILK 111

Query: 63  ---KGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENP 119
                  T L  A+  G+              ++  L S                   + 
Sbjct: 112 ATNYNGHTCLHLASIHGY------------LGIVELLVS----------------LGADV 143

Query: 120 RPQNERS----LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVL 175
             Q   +    L  A    +   V  LL  G  V+  T +G                   
Sbjct: 144 NAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQG------------------- 184

Query: 176 LAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYA 230
                           +P           I + L     +             Y 
Sbjct: 185 ---------------YSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYD 224

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  179 bits (457), Expect = 3e-52
 Identities = 49/224 (21%), Positives = 92/224 (41%), Gaps = 14/224 (6%)

Query: 120 RPQNERS------LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQ 173
           +P  +        + +A    + +T  +L  E   +   TD  ++      S G   L  
Sbjct: 3   KPPPKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIP 62

Query: 174 VLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAG 233
                   V ++    +  PL EAA  G +  +R  +++   VNG   +G+T L +AC G
Sbjct: 63  -----SNYVAEQAESID-NPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHG 116

Query: 234 GHEAVVRVLL-ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKES 292
           GH+ +V +L  +    +   N+ G T L  AA  G+  + ++LL  GA  +   N  K+ 
Sbjct: 117 GHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDL-RNIEKKL 175

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHV 336
           A  +A       +++      A +     E +    ++ ++ H 
Sbjct: 176 AFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHHH 219

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  161 bits (409), Expect = 2e-45
 Identities = 41/199 (20%), Positives = 76/199 (38%), Gaps = 8/199 (4%)

Query: 150 HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLL 209
            +    G+  +  A           L     ++       + T   +  S G   ++   
Sbjct: 6   PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSD-TNWWKGTSKGRTGLI--- 61

Query: 210 INHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHV 269
                 V  Q+ S + PL  A   G+ + +R  L+    V   ++ G T L  A   GH 
Sbjct: 62  --PSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHK 119

Query: 270 GVAKILL-EYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALM 328
            + ++L  +    +N   N+  ++AL  A +KG+ D+V+ LL+ GA  + +  E   A  
Sbjct: 120 DIVEMLFTQPNIELNQ-QNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFD 178

Query: 329 EASMDGHVEVAKLLLDSGA 347
            A+      + K    + A
Sbjct: 179 MATNAACASLLKKKQGTDA 197

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  153 bits (390), Expect = 7e-43
 Identities = 44/221 (19%), Positives = 64/221 (28%), Gaps = 38/221 (17%)

Query: 520 KNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVAD 579
           K G          +  A           L      +   T   DT        G T +  
Sbjct: 10  KPG-------QVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIP 62

Query: 580 LLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVA 639
                         L EAAK G+ + ++  LD    V+   + G TAL +AC  GH D+ 
Sbjct: 63  SNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIV 122

Query: 640 DLLLS-YGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHL 693
           ++L +     L        T L  AA  G+A++VQLLL                      
Sbjct: 123 EMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLA--------------------- 161

Query: 694 CSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
               K +    +      A   A       +        A 
Sbjct: 162 ----KGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV 198

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  152 bits (385), Expect = 3e-42
 Identities = 40/237 (16%), Positives = 72/237 (30%), Gaps = 46/237 (19%)

Query: 500 ETALTLACCGGFLDVADFLLKNGANI----ELGASTPLMEAAQEGHLELVRYLLDSGAQV 555
           +  +  A         D L     +I    ++   T   +   +G   L+         V
Sbjct: 13  QVKVFRALYTFEPRTPDELYIEEGDIIYITDMS-DTNWWKGTSKGRTGLIP-----SNYV 66

Query: 556 HAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLL 610
             + ++ D  L  A + G+       L     +       ST L  A  GGH ++V++L 
Sbjct: 67  AEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLF 126

Query: 611 DFPR-SVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHA 664
             P   ++ + + GDTAL  A   G+ D+  LLL+ GA       +       A     A
Sbjct: 127 TQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACA 186

Query: 665 NVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGH 721
           ++++                            G  +               +    H
Sbjct: 187 SLLKKKQ-------------------------GTDAVRTLSNAEDYLDDEDSDLEHH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  151 bits (384), Expect = 5e-42
 Identities = 40/263 (15%), Positives = 76/263 (28%), Gaps = 59/263 (22%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
              +  A  +        L     D+   +   +T      + G   ++         V 
Sbjct: 13  QVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIP-----SNYVA 67

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
           +  E+   PL EAA  G++   +  L+   G+N   ++   +AL  AC+ GH D+V  L 
Sbjct: 68  EQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNG-LDKAGSTALYWACHGGHKDIVEMLF 126

Query: 311 S-AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSS 369
           +    +   +     TAL  A+  G+ ++ +LLL  GA+                     
Sbjct: 127 TQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKGAR--------------------- 165

Query: 370 ISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM 429
                                               E +    +A +A    L +     
Sbjct: 166 ------------------------------TDLRNIEKKLAFDMATNAACASLLKKKQGT 195

Query: 430 HANVEDRGIKGECTPLMEAASSG 452
            A       +       ++    
Sbjct: 196 DAVRTLSNAEDY-LDDEDSDLEH 217

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  139 bits (352), Expect = 1e-37
 Identities = 37/179 (20%), Positives = 59/179 (32%), Gaps = 8/179 (4%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
             +  S G     +  L     V E  +  ++ L  A   G     +  L     V    
Sbjct: 49  WWKGTSKG-----RTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLD 103

Query: 187 IKGECTPLMEAASSGFIEIVRLLINH-GADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245
             G  T L  A   G  +IV +L      ++N Q+  G+T L  A   G+  +V++LL  
Sbjct: 104 KAG-STALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAK 162

Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD 304
           GA  +  N         A +A    + K      A     + E        +  + H  
Sbjct: 163 GARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAE-DYLDDEDSDLEHHHH 220

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  132 bits (334), Expect = 2e-35
 Identities = 35/246 (14%), Positives = 75/246 (30%), Gaps = 33/246 (13%)

Query: 25  HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGD 84
            +    G+  +  A           L     ++       + T   +  S G   L    
Sbjct: 6   PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSD-TNWWKGTSKGRTGLIPS- 63

Query: 85  GKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLT 144
                                         + E+     +  L +A   G++  +++ L 
Sbjct: 64  -------------------------NYVAEQAES----IDNPLHEAAKRGNLSWLRECLD 94

Query: 145 EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAASSGFI 203
               V+     G + L  AC  G+ ++ ++L       +  +   G+ T L  AA  G+ 
Sbjct: 95  NRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGD-TALHAAAWKGYA 153

Query: 204 EIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEA 263
           +IV+LL+  GA  + ++         A      ++++      A     N   +    ++
Sbjct: 154 DIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDS 213

Query: 264 ASAGHV 269
               H 
Sbjct: 214 DLEHHH 219

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  124 bits (313), Expect = 2e-32
 Identities = 41/263 (15%), Positives = 67/263 (25%), Gaps = 65/263 (24%)

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 437
           + +A    + +T  +L  E   +   TD  ++      S G   L          V ++ 
Sbjct: 16  VFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIP-----SNYVAEQA 70

Query: 438 IKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTE 496
              +  PL EAA  G                          L      +     +N   +
Sbjct: 71  ESID-NPLHEAAKRGN-------------------------LSWLRECLDNRVGVNGLDK 104

Query: 497 ETQETALTLACCGGFLDVADFLLKN-GANIELG---ASTPLMEAAQEGHLELVRYLLDSG 552
               TAL  AC GG  D+ + L       +        T L  AA +G+ ++V+ LL  G
Sbjct: 105 A-GSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAAWKGYADIVQLLLAKG 163

Query: 553 AQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDF 612
           A+   +      A   A       +        A                          
Sbjct: 164 ARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAV------------------------- 198

Query: 613 PRSVHAKTQTGDTALTYACENGH 635
                            +    H
Sbjct: 199 ---RTLSNAEDYLDDEDSDLEHH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  109 bits (274), Expect = 3e-27
 Identities = 36/295 (12%), Positives = 72/295 (24%), Gaps = 89/295 (30%)

Query: 253 NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312
            + G   +  A           L      I     +  ++       KG   ++      
Sbjct: 9   VKPGQVKVFRALYTFEPRTPDELYIEEGDIIYI-TDMSDTNWWKGTSKGRTGLIP----- 62

Query: 313 GADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISY 372
                 + + +   L EA+  G++   +  LD+                           
Sbjct: 63  SNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRV------------------------- 97

Query: 373 TYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH-A 431
                                      V+     G + L  AC  G+ ++ ++L      
Sbjct: 98  --------------------------GVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNI 131

Query: 432 NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAK 490
            +  +   G+ T L  AA  G      + V                      +L+  GA+
Sbjct: 132 ELNQQNKLGD-TALHAAAWKGYA----DIVQ---------------------LLLAKGAR 165

Query: 491 INAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHL 542
            +    E ++ A  +A       +        A   L          ++  E H 
Sbjct: 166 TDLRNIE-KKLAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHHH 219

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score =  101 bits (254), Expect = 1e-24
 Identities = 33/284 (11%), Positives = 64/284 (22%), Gaps = 82/284 (28%)

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA 352
            +  A Y         L     D  + TD   T   + +  G   +              
Sbjct: 15  KVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLIPSN---------- 64

Query: 353 YARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS 412
                     +              L +A   G++  +++ L     V+     G + L 
Sbjct: 65  ----YVAEQAESID---------NPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALY 111

Query: 413 LACSAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFP 471
            AC  G+ ++ ++L       +  +   G+ T L  AA  G      + V          
Sbjct: 112 WACHGGHKDIVEMLFTQPNIELNQQNKLGD-TALHAAAWKGYA----DIVQ--------- 157

Query: 472 NDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS 530
                       +L+  GA+ +                                      
Sbjct: 158 ------------LLLAKGARTDLRN------------------------IEK-------K 174

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGH 574
                A       L++    + A               +    H
Sbjct: 175 LAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHH 218

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 71.1 bits (175), Expect = 4e-14
 Identities = 12/123 (9%), Positives = 26/123 (21%), Gaps = 35/123 (28%)

Query: 617 HAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLL 671
               + G   +  A         D L     ++      + T   +    G   ++    
Sbjct: 6   PKPVKPGQVKVFRALYTFEPRTPDELYIEEGDIIYITDMSDTNWWKGTSKGRTGLI---- 61

Query: 672 DFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSY 731
                                       + V  + ++ D  L  A + G+       L  
Sbjct: 62  --------------------------PSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDN 95

Query: 732 GAN 734
              
Sbjct: 96  RVG 98

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A Length = 222

 Score = 70.7 bits (174), Expect = 6e-14
 Identities = 31/234 (13%), Positives = 61/234 (26%), Gaps = 64/234 (27%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
             +  S G     +  L     V E  +  ++ L  A   G     +  L     V    
Sbjct: 49  WWKGTSKG-----RTGLIPSNYVAEQAESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLD 103

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
             G  T L  A   G              +++  L +  +  L++        +N+    
Sbjct: 104 KAG-STALYWACHGGH------------KDIVEMLFTQPNIELNQ--------QNKL--- 139

Query: 122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 181
             + +L  A   G    V+ LL +G                                 A 
Sbjct: 140 -GDTALHAAAWKGYADIVQLLLAKG---------------------------------AR 165

Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH 235
            + R I+ +      A ++    +++      A     ++        +    H
Sbjct: 166 TDLRNIEKK-LAFDMATNAACASLLKKKQGTDAVRTLSNAEDYLDDEDSDLEHH 218

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  174 bits (445), Expect = 7e-51
 Identities = 51/189 (26%), Positives = 81/189 (42%), Gaps = 8/189 (4%)

Query: 156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGAD 215
           GE +  +       +    L     N  D       TPLM A   G    +  L+ +   
Sbjct: 8   GEIVEKIKDEKSINQNLDFLR----NYRD---SYNRTPLMVACMLGMENAIDKLVENFDK 60

Query: 216 VNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
           +  +   G+T L++A       +   LL  G+NV   + +G TPLM +   G+  ++  L
Sbjct: 61  LEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFL 120

Query: 276 LEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGH 335
           LE+GA +N   N   E+ L +A   G  ++V+ LL  GAD   +     TA   A + G 
Sbjct: 121 LEHGANVND-RNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGR 179

Query: 336 VEVAKLLLD 344
            EV K+  +
Sbjct: 180 QEVIKIFTE 188

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  161 bits (411), Expect = 5e-46
 Identities = 53/192 (27%), Positives = 86/192 (44%), Gaps = 9/192 (4%)

Query: 130 ACSDGDVKTVKKLLTEGRSVH-------ETTDEGESLLSLACSAGYYELAQVLLAMHANV 182
           +  D + + V+K+  E                   + L +AC  G       L+     +
Sbjct: 2   SHMDKNGEIVEKIKDEKSINQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKL 61

Query: 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVL 242
           ED+ I+G  T L+ A  +  + I   L++ G++VN +  SG TPLM++   G+  +   L
Sbjct: 62  EDKDIEG-STALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFL 120

Query: 243 LECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGH 302
           LE GANV D N  G TPL+ A+  G   + K LLE GA I+   +    +A   A   G 
Sbjct: 121 LEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISA-RDLTGLTAEASARIFGR 179

Query: 303 LDMVRFLLSAGA 314
            ++++       
Sbjct: 180 QEVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  154 bits (393), Expect = 1e-43
 Identities = 54/255 (21%), Positives = 91/255 (35%), Gaps = 73/255 (28%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLL----KNGANIELGASTPLMEAAQEGHLE 543
           G+ ++ +     E    +          DFL                TPLM A   G   
Sbjct: 1   GSHMDKN----GEIVEKIKDEKSINQNLDFLRNYRDSYN-------RTPLMVACMLGMEN 49

Query: 544 LVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHA 603
            +  L+++  ++  K   G TAL +A +N    +A+ LLS G+N                
Sbjct: 50  AIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSN---------------- 93

Query: 604 NVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEA 658
                       V+ K  +G T L ++   G+++++  LL +GAN+     +  T LI A
Sbjct: 94  ------------VNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVA 141

Query: 659 AKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACE 718
           +K G + +V+ LL                         G  + + A+  TG TA   A  
Sbjct: 142 SKYGRSEIVKKLL-----------------------ELG--ADISARDLTGLTAEASARI 176

Query: 719 NGHTDVADLLLSYGA 733
            G  +V  +      
Sbjct: 177 FGRQEVIKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  149 bits (380), Expect = 9e-42
 Identities = 46/156 (29%), Positives = 71/156 (45%), Gaps = 7/156 (4%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
                       + +  L N+      + S   TPLM AC  G E  +  L+E    +ED
Sbjct: 10  IVEKIKDEKSINQNLDFLRNY------RDSYNRTPLMVACMLGMENAIDKLVENFDKLED 63

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
            +  G T L+ A     +G+A+ LL  G+ +NT  +   ++ L  +   G+ +M  FLL 
Sbjct: 64  KDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTK-DFSGKTPLMWSIIFGYSEMSYFLLE 122

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
            GA+   +  E  T L+ AS  G  E+ K LL+ GA
Sbjct: 123 HGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGA 158

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  136 bits (346), Expect = 4e-37
 Identities = 47/152 (30%), Positives = 71/152 (46%), Gaps = 1/152 (0%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           AC  G    + KL+     + +   EG + L  A       +A+ LL+  +NV  +   G
Sbjct: 42  ACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSG 101

Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
           + TPLM +   G+ E+   L+ HGA+VN ++  G TPL+ A   G   +V+ LLE GA++
Sbjct: 102 K-TPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADI 160

Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
              +  G T    A   G   V KI  E    
Sbjct: 161 SARDLTGLTAEASARIFGRQEVIKIFTEVRRA 192

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  131 bits (333), Expect = 2e-35
 Identities = 53/246 (21%), Positives = 82/246 (33%), Gaps = 67/246 (27%)

Query: 407 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYAR 466
           GE +  +       +    L     N  D       TPLM A   G +     ++     
Sbjct: 8   GEIVEKIKDEKSINQNLDFLR----NYRD---SYNRTPLMVACMLGME----NAID---- 52

Query: 467 HDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI 525
                             L+    K+     E   TAL  A     L +A+ LL  G+N+
Sbjct: 53  -----------------KLVENFDKLEDKDIE-GSTALIWAVKNNRLGIAEKLLSKGSNV 94

Query: 526 E----LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLL 581
                 G  TPLM +   G+ E+  +LL+ GA V+ +   G+T L  A + G +++   L
Sbjct: 95  NTKDFSG-KTPLMWSIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKL 153

Query: 582 LSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADL 641
           L  GA+                            + A+  TG TA   A   G  +V  +
Sbjct: 154 LELGAD----------------------------ISARDLTGLTAEASARIFGRQEVIKI 185

Query: 642 LLSYGA 647
                 
Sbjct: 186 FTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score =  112 bits (283), Expect = 1e-28
 Identities = 45/242 (18%), Positives = 76/242 (31%), Gaps = 62/242 (25%)

Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           G+ ++    +G               +  L          +    TPLM A   G     
Sbjct: 1   GSHMDK---NGEIVEKIKDEKSINQNLDFLRNYR------DSYNRTPLMVACMLGMENAI 51

Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASM 332
             L+E    +    +    +AL  A     L +   LLS G++   K     T LM + +
Sbjct: 52  DKLVENFDKLEDK-DIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSII 110

Query: 333 DGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKK 392
            G+ E++  L                           + +                    
Sbjct: 111 FGYSEMSYFL---------------------------LEH-------------------- 123

Query: 393 LLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 452
               G +V++   EGE+ L +A   G  E+ + LL + A++  R + G  T    A   G
Sbjct: 124 ----GANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGL-TAEASARIFG 178

Query: 453 RQ 454
           RQ
Sbjct: 179 RQ 180

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 96.3 bits (241), Expect = 4e-23
 Identities = 39/118 (33%), Positives = 66/118 (55%), Gaps = 1/118 (0%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L+ A  +  +   +KLL++G +V+     G++ L  +   GY E++  LL   ANV DR 
Sbjct: 72  LIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRN 131

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
           ++GE TPL+ A+  G  EIV+ L+  GAD++ +  +G T    A   G + V+++  E
Sbjct: 132 LEGE-TPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTE 188

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 95.1 bits (238), Expect = 1e-22
 Identities = 52/309 (16%), Positives = 82/309 (26%), Gaps = 119/309 (38%)

Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEV 338
           G+ ++ +     E    +   K     + FL        ++     T LM A M G    
Sbjct: 1   GSHMDKN----GEIVEKIKDEKSINQNLDFLR------NYRDSYNRTPLMVACMLGMENA 50

Query: 339 AKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGR 398
              L                           +                            
Sbjct: 51  IDKL---------------------------VEN------------------------FD 59

Query: 399 SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLN 458
            + +   EG + L  A       +A+ LL+  +NV  +   G  TPLM +   G      
Sbjct: 60  KLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSG-KTPLMWSIIFGYS---- 114

Query: 459 ESVSAYARHDFFPNDKSVNGLQASVILI-PGAKINAHTEETQETALTLACCGGFLDVADF 517
           E                         L+  GA +N                         
Sbjct: 115 EMSY---------------------FLLEHGANVNDRN---------------------- 131

Query: 518 LLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDV 577
               G        TPL+ A++ G  E+V+ LL+ GA + A+  TG TA   A   G  +V
Sbjct: 132 --LEG-------ETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEV 182

Query: 578 ADLLLSYGA 586
             +      
Sbjct: 183 IKIFTEVRR 191

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 48.2 bits (116), Expect = 2e-06
 Identities = 8/45 (17%), Positives = 13/45 (28%)

Query: 690 SSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                +Q      + +     T L  AC  G  +  D L+     
Sbjct: 16  DEKSINQNLDFLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDK 60

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 43.1 bits (103), Expect = 8e-05
 Identities = 39/173 (22%), Positives = 63/173 (36%), Gaps = 28/173 (16%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           AC  G    + KL+     + +   EG + L  A       +A+ LL+  +NV  +   G
Sbjct: 42  ACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFSG 101

Query: 65  ECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE 124
             TPLM +   G+ +++           L          L+  A       N N R    
Sbjct: 102 -KTPLMWSIIFGYSEMS---------YFL----------LEHGA-------NVNDRNLEG 134

Query: 125 R-SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 176
              L+ A   G  + VKKLL  G  +      G +  + A   G  E+ ++  
Sbjct: 135 ETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT 187

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium} Length = 192

 Score = 42.8 bits (102), Expect = 1e-04
 Identities = 26/75 (34%), Positives = 43/75 (57%), Gaps = 1/75 (1%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           L+ A  +  +   +KLL++G +V+     G++ L  +   GY E++  LL   ANV DR 
Sbjct: 72  LIWAVKNNRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYSEMSYFLLEHGANVNDRN 131

Query: 62  IKGECTPLMEAASSG 76
           ++GE TPL+ A+  G
Sbjct: 132 LEGE-TPLIVASKYG 145

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  171 bits (437), Expect = 4e-50
 Identities = 58/153 (37%), Positives = 89/153 (58%), Gaps = 1/153 (0%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
              L+EAA +G  + VR+L+ +GADVN + +SG TPL  A   GH  +V VLL+ GA+V 
Sbjct: 15  GKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVN 74

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
             +  G TPL  AA  GH+ + ++LL+ GA +N  ++    + L LA   GHL++V  LL
Sbjct: 75  AVDHAGMTPLRLAALFGHLEIVEVLLKNGADVN-ANDMEGHTPLHLAAMFGHLEIVEVLL 133

Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLL 343
             GAD   +     TA   +  +G+ ++A++L 
Sbjct: 134 KNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  155 bits (395), Expect = 3e-44
 Identities = 48/167 (28%), Positives = 83/167 (49%), Gaps = 14/167 (8%)

Query: 515 ADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGH 574
           +     +G+++       L+EAA+ G  + VR L+ +GA V+A+  +G T L  A  NGH
Sbjct: 4   SHHHHHHGSDLG----KKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGH 59

Query: 575 TDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTY 629
            ++ ++LL  GA++        T L  AA  GH  +V++LL     V+A    G T L  
Sbjct: 60  LEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHL 119

Query: 630 ACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLL 671
           A   GH ++ ++LL  GA++        T    +   G+ ++ ++L 
Sbjct: 120 AAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  152 bits (386), Expect = 6e-43
 Identities = 57/152 (37%), Positives = 87/152 (57%), Gaps = 2/152 (1%)

Query: 160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
           L  A  AG  +  ++L+A  A+V      G  TPL  AA +G +EIV +L+ +GADVN  
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAEDASGW-TPLHLAAFNGHLEIVEVLLKNGADVNAV 76

Query: 220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
             +G TPL  A   GH  +V VLL+ GA+V  ++  GHTPL  AA  GH+ + ++LL+ G
Sbjct: 77  DHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNG 136

Query: 280 AGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
           A +N   ++F ++A  ++   G+ D+   L  
Sbjct: 137 ADVN-AQDKFGKTAFDISIDNGNEDLAEILQK 167

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  151 bits (384), Expect = 1e-42
 Identities = 55/166 (33%), Positives = 82/166 (49%), Gaps = 8/166 (4%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLEL 544
           G+  + H        L  A   G  D    L+ NGA++        TPL  AA  GHLE+
Sbjct: 3   GSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEI 62

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAK 599
           V  LL +GA V+A    G T L  A   GH ++ ++LL  GA++     +  T L  AA 
Sbjct: 63  VEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAM 122

Query: 600 GGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
            GH  +V++LL     V+A+ + G TA   + +NG+ D+A++L   
Sbjct: 123 FGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  144 bits (365), Expect = 4e-40
 Identities = 50/140 (35%), Positives = 75/140 (53%), Gaps = 8/140 (5%)

Query: 208 LLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG 267
              +HG+D           L+ A   G +  VR+L+  GA+V   + +G TPL  AA  G
Sbjct: 6   HHHHHGSD-------LGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNG 58

Query: 268 HVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTAL 327
           H+ + ++LL+ GA +N   +    + L LA   GHL++V  LL  GAD      E HT L
Sbjct: 59  HLEIVEVLLKNGADVNA-VDHAGMTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPL 117

Query: 328 MEASMDGHVEVAKLLLDSGA 347
             A+M GH+E+ ++LL +GA
Sbjct: 118 HLAAMFGHLEIVEVLLKNGA 137

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  134 bits (341), Expect = 8e-37
 Identities = 53/149 (35%), Positives = 76/149 (51%), Gaps = 1/149 (0%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           A   G    V+ L+  G  V+     G + L LA   G+ E+ +VLL   A+V      G
Sbjct: 21  AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80

Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
             TPL  AA  G +EIV +L+ +GADVN     G+TPL  A   GH  +V VLL+ GA+V
Sbjct: 81  -MTPLRLAALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADV 139

Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEY 278
              ++ G T    +   G+  +A+IL + 
Sbjct: 140 NAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  113 bits (286), Expect = 2e-29
 Identities = 58/178 (32%), Positives = 83/178 (46%), Gaps = 31/178 (17%)

Query: 411 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFF 470
           L  A  AG  +  ++L+A  A+V      G  TPL  AA +G      E V         
Sbjct: 18  LLEAARAGRDDEVRILMANGADVNAEDASGW-TPLHLAAFNGHL----EIVE-------- 64

Query: 471 PNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA 529
                        +L+  GA +NA       T L LA   G L++ + LLKNGA++    
Sbjct: 65  -------------VLLKNGADVNAVDHA-GMTPLRLAALFGHLEIVEVLLKNGADVNAND 110

Query: 530 ---STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSY 584
               TPL  AA  GHLE+V  LL +GA V+A+ + G TA   + +NG+ D+A++L   
Sbjct: 111 MEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL 168

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score =  112 bits (284), Expect = 4e-29
 Identities = 51/209 (24%), Positives = 79/209 (37%), Gaps = 54/209 (25%)

Query: 246 GANVED-HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD 304
           G++    H  +    L+EAA AG     +IL+  GA +N   +    + L LA + GHL+
Sbjct: 3   GSHHHHHHGSDLGKKLLEAARAGRDDEVRILMANGADVNA-EDASGWTPLHLAAFNGHLE 61

Query: 305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKC 364
           +V  LL  GAD         T L  A++ GH+E+ ++LL +GA                 
Sbjct: 62  IVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEIVEVLLKNGA----------------- 104

Query: 365 ERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQ 424
                                              V+    EG + L LA   G+ E+ +
Sbjct: 105 ----------------------------------DVNANDMEGHTPLHLAAMFGHLEIVE 130

Query: 425 VLLAMHANVEDRGIKGECTPLMEAASSGR 453
           VLL   A+V  +   G  T    +  +G 
Sbjct: 131 VLLKNGADVNAQDKFG-KTAFDISIDNGN 158

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 59.3 bits (145), Expect = 2e-10
 Identities = 20/112 (17%), Positives = 32/112 (28%), Gaps = 53/112 (47%)

Query: 623 GDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSL 682
               L  A   G  D   +L++ GA+                                  
Sbjct: 14  LGKKLLEAARAGRDDEVRILMANGAD---------------------------------- 39

Query: 683 SSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                              V+A+  +G T L  A  NGH ++ ++LL  GA+
Sbjct: 40  -------------------VNAEDASGWTPLHLAAFNGHLEIVEVLLKNGAD 72

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C* Length = 169

 Score = 45.8 bits (110), Expect = 8e-06
 Identities = 43/173 (24%), Positives = 65/173 (37%), Gaps = 28/173 (16%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A   G    V+ L+  G  V+     G + L LA   G+ E+ +VLL   A+V      G
Sbjct: 21  AARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAG 80

Query: 65  ECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE 124
             TPL  AA  G  ++          EVL          L   A       + N      
Sbjct: 81  -MTPLRLAALFGHLEIV---------EVL----------LKNGA-------DVNANDMEG 113

Query: 125 R-SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 176
              L  A   G ++ V+ LL  G  V+     G++   ++   G  +LA++L 
Sbjct: 114 HTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQ 166

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  173 bits (441), Expect = 8e-50
 Identities = 55/222 (24%), Positives = 99/222 (44%), Gaps = 11/222 (4%)

Query: 130 ACSDGDVKTVKKLL-TEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK 188
           AC + +   V++LL ++   + +   +G   L  + S   +E+   LL+   NV      
Sbjct: 9   ACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYP 68

Query: 189 GE--CTPLMEAASSGFIEIVRLLINH--GADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
            +   TP   A S G +E+V+ L +     D+N  ++ G T L  A       V + L+E
Sbjct: 69  DDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIE 128

Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG-AGINTHSNEFKESALTLACYKGHL 303
            GA+V   ++    PL  AAS G + + ++L   G + +N   ++   + L  A  +GH 
Sbjct: 129 NGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW-QDKQGWTPLFHALAEGHG 187

Query: 304 DMVRFLLSA-GADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344
           D    L+   GA+ +   ++   A   A    + +V K  L+
Sbjct: 188 DAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  166 bits (423), Expect = 2e-47
 Identities = 55/222 (24%), Positives = 82/222 (36%), Gaps = 41/222 (18%)

Query: 530 STPLMEAAQEGHLELVR-YLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 588
           + PL +A  E     V+  L    + +  K Q G   L ++      ++   LLS   N+
Sbjct: 3   NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 62

Query: 589 --------DNSTMLIEAAKGGHANVVQLLLDFPRS--VHAKTQTGDTALTYACENGHTDV 638
                      T    A   G+  VV+ L D P    ++  T  G T L  A      +V
Sbjct: 63  NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 122

Query: 639 ADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHL 693
           +  L+  GA++      N   L  AA  G   +++LL                       
Sbjct: 123 SQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLC---------------------- 160

Query: 694 CSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLS-YGAN 734
              G KS V+ + + G T L +A   GH D A LL+  YGA 
Sbjct: 161 -GLG-KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE 200

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  165 bits (421), Expect = 5e-47
 Identities = 49/243 (20%), Positives = 93/243 (38%), Gaps = 26/243 (10%)

Query: 191 CTPLMEAASSG-FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
             PL +A     F ++  LL +  + +  +   G  PL ++ +     +   LL    NV
Sbjct: 3   NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENV 62

Query: 250 ---EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHS-NEFKESALTLACYKGHLDM 305
              +  +++G TP   A S G++ V K L +     + +       + L LA  K   ++
Sbjct: 63  NLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEV 122

Query: 306 VRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCE 365
            +FL+  GA    K       L  A+  G +++ +LL   G  +V+          DK  
Sbjct: 123 SQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNW--------QDKQG 174

Query: 366 RPSSISYTYSRSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQ 424
                 +T    L  A ++G       L+ + G       ++G     +A +    ++ +
Sbjct: 175 ------WT---PLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKK 222

Query: 425 VLL 427
             L
Sbjct: 223 FFL 225

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  158 bits (402), Expect = 2e-44
 Identities = 53/252 (21%), Positives = 87/252 (34%), Gaps = 49/252 (19%)

Query: 442 CTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQE 500
             PL +A          +                        +L    + +    ++   
Sbjct: 3   NYPLHQACMEN---EFFKVQE---------------------LLHSKPSLLLQKDQD-GR 37

Query: 501 TALTLACCGGFLDVADFLLKNGANIELGAS------TPLMEAAQEGHLELVRYLLD--SG 552
             L  +      ++  FLL    N+ L         TP   A   G+LE+V+ L D    
Sbjct: 38  IPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLK 97

Query: 553 AQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQ 607
             ++  T  G T L  A      +V+  L+  GA++      N   L  AA  G   +++
Sbjct: 98  PDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIE 157

Query: 608 LLLDFPRS-VHAKTQTGDTALTYACENGHTDVADLLLS-YGANL-----DNSTMLIEAAK 660
           LL    +S V+ + + G T L +A   GH D A LL+  YGA         +     A  
Sbjct: 158 LLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL- 216

Query: 661 GGHANVVQLLLD 672
             +  V +  L+
Sbjct: 217 --NEQVKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  148 bits (377), Expect = 5e-41
 Identities = 52/235 (22%), Positives = 95/235 (40%), Gaps = 26/235 (11%)

Query: 223 GNTPLMYACAGGH-EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
            N PL  AC       V  +L    + +   +++G  PL  + S     +   LL     
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMEN 61

Query: 282 INT--HSNEFKESALTLACYKGHLDMVRFLLS--AGADQEHKTDEMHTALMEASMDGHVE 337
           +N   + ++   +   +AC  G+L++V+ L       D    T++  T L  A      E
Sbjct: 62  VNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFE 121

Query: 338 VAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEG 397
           V++ L+++GA SV    + +  P                 L +A S G +K ++ L   G
Sbjct: 122 VSQFLIENGA-SVRIKDKFNQIP-----------------LHRAASVGSLKLIELLCGLG 163

Query: 398 RS-VHETTDEGESLLSLACSAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAAS 450
           +S V+    +G + L  A + G+ + A +L+  + A  +    KG       A +
Sbjct: 164 KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGA-KAEDVALN 217

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  134 bits (341), Expect = 4e-36
 Identities = 60/275 (21%), Positives = 94/275 (34%), Gaps = 68/275 (24%)

Query: 381 ACSDGDVKTVKKLL-TEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK 439
           AC + +   V++LL ++   + +   +G   L  + S   +E+   LL+   NV      
Sbjct: 9   ACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYP 68

Query: 440 GE--CTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILI---PGAKINAH 494
            +   TP   A S G                          L+    L        +N  
Sbjct: 69  DDSGWTPFHIACSVGN-------------------------LEVVKSLYDRPLKPDLNKI 103

Query: 495 TEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVRYLLDS 551
           T +   T L LA    + +V+ FL++NGA++ +       PL  AA  G L+L+  L   
Sbjct: 104 TNQ-GVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGL 162

Query: 552 G-AQVHAKTQTGDTALTYACENGHTDVADLLLS-YGANLDNSTMLIEAAKGGHANVVQLL 609
           G + V+ + + G T L +A   GH D A LL+  YGA                       
Sbjct: 163 GKSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAE---------------------- 200

Query: 610 LDFPRSVHAKTQTGDTALTYACENGHTDVADLLLS 644
                        G  A   A       V    L+
Sbjct: 201 ------YDLVDNKGAKAEDVALNE---QVKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  121 bits (306), Expect = 2e-31
 Identities = 52/333 (15%), Positives = 93/333 (27%), Gaps = 113/333 (33%)

Query: 256 GHTPLMEAASAGHVG-VAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
            + PL +A        V ++L    + +    ++     L  +      ++  FLLS   
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSLLLQ-KDQDGRIPLHWSVSFQAHEITSFLLSKME 60

Query: 315 D---QEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSIS 371
           +    ++  D   T    A   G++EV K L D                           
Sbjct: 61  NVNLDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPL------------------------ 96

Query: 372 YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 431
                                       +++ T++G + L LA    ++E++Q L+   A
Sbjct: 97  -------------------------KPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGA 131

Query: 432 NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKI 491
           +V  +       PL  AAS G                   + K +  L      +  + +
Sbjct: 132 SVRIKDKFN-QIPLHRAASVG-------------------SLKLIELL----CGLGKSAV 167

Query: 492 NAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDS 551
           N   ++   T L                                A  EGH +    L++ 
Sbjct: 168 NWQDKQ-GWTPL------------------------------FHALAEGHGDAAVLLVEK 196

Query: 552 -GAQVHAKTQTGDTALTYACENGHTDVADLLLS 583
            GA+       G  A   A       V    L+
Sbjct: 197 YGAEYDLVDNKGAKAEDVALNE---QVKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  111 bits (281), Expect = 5e-28
 Identities = 57/279 (20%), Positives = 88/279 (31%), Gaps = 67/279 (24%)

Query: 5   ACSDGDVKTVKKLL-TEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK 63
           AC + +   V++LL ++   + +   +G   L  + S   +E+   LL+   NV      
Sbjct: 9   ACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYP 68

Query: 64  GE--CTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
            +   TP   A S G              EV++ L                   + N   
Sbjct: 69  DDSGWTPFHIACSVGN------------LEVVKSLYDRPLKP------------DLNKIT 104

Query: 122 QNER-SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 180
                 L  A      +  + L+  G SV                               
Sbjct: 105 NQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFN------------------------ 140

Query: 181 NVEDRGIKGECTPLMEAASSGFIEIVRLLINHG-ADVNGQSSSGNTPLMYACAGGHEAVV 239
                       PL  AAS G ++++ LL   G + VN Q   G TPL +A A GH    
Sbjct: 141 ----------QIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHGDAA 190

Query: 240 RVLLE-CGANVEDHNENGHTPLMEAASAGHVGVAKILLE 277
            +L+E  GA  +  +  G      A    +  V K  L 
Sbjct: 191 VLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLN 226

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A Length = 228

 Score =  111 bits (280), Expect = 6e-28
 Identities = 31/182 (17%), Positives = 49/182 (26%), Gaps = 60/182 (32%)

Query: 562 GDTALTYACENGHTD-VADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKT 620
            +  L  AC       V +LL S  +                             +  K 
Sbjct: 2   SNYPLHQACMENEFFKVQELLHSKPSL----------------------------LLQKD 33

Query: 621 QTGDTALTYACENGHTDVADLLLSYGANL--------DNSTMLIEAAKGGHANVVQLLLD 672
           Q G   L ++      ++   LLS   N+           T    A   G+  VV+ L  
Sbjct: 34  QDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVGNLEVVKSLY- 92

Query: 673 FPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYG 732
                                  +  K  ++  T  G T L  A      +V+  L+  G
Sbjct: 93  ----------------------DRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENG 130

Query: 733 AN 734
           A+
Sbjct: 131 AS 132

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  172 bits (437), Expect = 4e-49
 Identities = 41/189 (21%), Positives = 73/189 (38%), Gaps = 4/189 (2%)

Query: 154 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG 213
             G+  L         +     +A    V+          L++++  G  ++V+ +I   
Sbjct: 3   ITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN--PLPLALLLDSSLEGEFDLVQRIIYEV 60

Query: 214 ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAK 273
            D +  +  G T L  A   GH  +V+ L++ G NV   + +G TPL  AAS  +V V K
Sbjct: 61  DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCK 120

Query: 274 ILLEYGAGINTHSNEFKESALTL--ACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEAS 331
            L+E GA +   +    ++A        +G+    +FL             +  AL +  
Sbjct: 121 FLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYE 180

Query: 332 MDGHVEVAK 340
                E+  
Sbjct: 181 PQNDDELPM 189

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  151 bits (385), Expect = 5e-42
 Identities = 45/212 (21%), Positives = 74/212 (34%), Gaps = 7/212 (3%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L         KT  + +  G  V        +LL  +   G ++L Q ++    +     
Sbjct: 9   LPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPN 67

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
            +G  T L  A  +G  EIV+ L+  G +VN   S G TPL  A +  +  V + L+E G
Sbjct: 68  DEGI-TALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESG 126

Query: 247 ANVEDHNENGH---TPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHL 303
           A V     +         E    G+   ++ L      +    N+    AL     +   
Sbjct: 127 AAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKMGI-MNKGVIYALWDYEPQND- 184

Query: 304 DMVRFLLSAGADQEHKTDEMHTALMEASMDGH 335
           D +           H+ DE       A ++  
Sbjct: 185 DELPMKEGDCMTIIHREDEDEIEWWWARLNDK 216

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  150 bits (381), Expect = 2e-41
 Identities = 37/246 (15%), Positives = 68/246 (27%), Gaps = 66/246 (26%)

Query: 500 ETALTLACCGGFLDVADFLLKNGANIEL--GASTPLMEAAQEGHLELVRYLLDSGAQVHA 557
           + +L               + +G  ++        L++++ EG  +LV+ ++        
Sbjct: 6   QVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPSL 65

Query: 558 KTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVH 617
               G TAL  A   GHT++   L+ +G N                            V+
Sbjct: 66  PNDEGITALHNAVCAGHTEIVKFLVQFGVN----------------------------VN 97

Query: 618 AKTQTGDTALTYACENGHTDVADLLLSYGANLD--------NSTMLIEAAKGGHANVVQL 669
           A    G T L  A    +  V   L+  GA +          +    E  + G+    Q 
Sbjct: 98  AADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQF 157

Query: 670 LLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLL 729
           L                           +K  +    +    AL            +L +
Sbjct: 158 LY-----------------------GVQEK--MGIMNKGVIYALWDYEPQND---DELPM 189

Query: 730 SYGANL 735
             G  +
Sbjct: 190 KEGDCM 195

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  140 bits (356), Expect = 4e-38
 Identities = 39/232 (16%), Positives = 75/232 (32%), Gaps = 19/232 (8%)

Query: 222 SGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
           +G   L               +  G  V+  N      L++++  G   + + ++     
Sbjct: 4   TGQVSLPPGKRTNLRKTGSERIAHGMRVKF-NPLPLALLLDSSLEGEFDLVQRIIYEVDD 62

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKL 341
            +   N+   +AL  A   GH ++V+FL+  G +      +  T L  A+   +V+V K 
Sbjct: 63  PSL-PNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKF 121

Query: 342 LLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVH 401
           L++SGA  V A    D               T +    +   +G  +  + L      + 
Sbjct: 122 LVESGAA-VFAMTYSDM-------------QTAA-DKCEEMEEGYTQCSQFLYGVQEKMG 166

Query: 402 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGR 453
                    L         EL  +       +  R  + E      A  + +
Sbjct: 167 IMNKGVIYALWDYEPQNDDELP-MKEGDCMTIIHREDEDE-IEWWWARLNDK 216

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  128 bits (323), Expect = 1e-33
 Identities = 35/194 (18%), Positives = 70/194 (36%), Gaps = 20/194 (10%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L+ +  +G+   V++++ E        DEG + L  A  AG+ E+ + L+    NV    
Sbjct: 41  LLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD 100

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGN---TPLMYACAGGHEAVVRVLL 243
             G  TPL  AAS   +++ + L+  GA V   + S              G+    + L 
Sbjct: 101 SDG-WTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY 159

Query: 244 ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHL 303
                +   N+     L +          ++ ++ G  +                ++   
Sbjct: 160 GVQEKMGIMNKGVIYALWDYEPQND---DELPMKEGDCMT-------------IIHREDE 203

Query: 304 DMVRFLLSAGADQE 317
           D + +  +   D+E
Sbjct: 204 DEIEWWWARLNDKE 217

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  127 bits (322), Expect = 2e-33
 Identities = 33/186 (17%), Positives = 60/186 (32%), Gaps = 37/186 (19%)

Query: 562 GDTALTYACENGHTDVADLLLSYGANL----DNSTMLIEAAKGGHANVVQLLLDFPRSVH 617
           G  +L               +++G  +        +L++++  G  ++VQ ++       
Sbjct: 5   GQVSLPPGKRTNLRKTGSERIAHGMRVKFNPLPLALLLDSSLEGEFDLVQRIIYEVDDPS 64

Query: 618 AKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLD 672
                G TAL  A   GHT++   L+ +G N+     D  T L  AA   +  V + L+ 
Sbjct: 65  LPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLV- 123

Query: 673 FPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGD---TALTYACENGHTDVADLLL 729
                                   G  + V A T +            E G+T  +  L 
Sbjct: 124 ----------------------ESG--AAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY 159

Query: 730 SYGANL 735
                +
Sbjct: 160 GVQEKM 165

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  122 bits (309), Expect = 9e-32
 Identities = 38/202 (18%), Positives = 63/202 (31%), Gaps = 24/202 (11%)

Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
             G   L               + +G  +    N    + L  +  +G  D+V+ ++   
Sbjct: 3   ITGQVSLPPGKRTNLRKTGSERIAHGMRVKF--NPLPLALLLDSSLEGEFDLVQRIIYEV 60

Query: 314 ADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYT 373
            D     DE  TAL  A   GH E+ K L+  G   V+A     + P             
Sbjct: 61  DDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVN-VNAADSDGWTP------------- 106

Query: 374 YSRSLVQACSDGDVKTVKKLLTEGRSVHETTD---EGESLLSLACSAGYYELAQVLLAMH 430
               L  A S  +V+  K L+  G +V   T    +  +        GY + +Q L  + 
Sbjct: 107 ----LHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGVQ 162

Query: 431 ANVEDRGIKGECTPLMEAASSG 452
             +           L +     
Sbjct: 163 EKMGIMNKGVI-YALWDYEPQN 183

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score =  111 bits (280), Expect = 7e-28
 Identities = 35/240 (14%), Positives = 71/240 (29%), Gaps = 45/240 (18%)

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 437
           L         KT  + +  G  V        +LL  +   G ++L Q ++    +     
Sbjct: 9   LPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPN 67

Query: 438 IKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTE 496
            +G  T L  A  +G                           +    L+  G  +NA   
Sbjct: 68  DEGI-TALHNAVCAGH-------------------------TEIVKFLVQFGVNVNAADS 101

Query: 497 ETQETALTLACCGGFLDVADFLLKNGANIE------LGASTPLMEAAQEGHLELVRYLLD 550
           +   T L  A     + V  FL+++GA +       +  +    E  +EG+ +  ++L  
Sbjct: 102 D-GWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG 160

Query: 551 SGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLL 610
              ++    +    AL            +L +  G         +        + ++   
Sbjct: 161 VQEKMGIMNKGVIYALWDYEPQND---DELPMKEGDC-------MTIIHREDEDEIEWWW 210

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 83.8 bits (208), Expect = 3e-18
 Identities = 34/272 (12%), Positives = 65/272 (23%), Gaps = 65/272 (23%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           L         KT  + +  G  V        +LL  +   G ++L Q ++    +     
Sbjct: 9   LPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPN 67

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
            +G  T L  A  +G  ++          + L          +           N N   
Sbjct: 68  DEGI-TALHNAVCAGHTEIV---------KFL----------VQFGV-------NVNAAD 100

Query: 122 QNER-SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 180
            +    L  A S  +V+  K L+  G +V   T                           
Sbjct: 101 SDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSD------------------------ 136

Query: 181 NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR 240
                          E    G+ +  + L      +   +      L        +    
Sbjct: 137 -------MQTAADKCEEMEEGYTQCSQFLYGVQEKMGIMNKGVIYALWDYEPQNDD---E 186

Query: 241 VLLECGA--NVEDHNENGHTPLMEAASAGHVG 270
           + ++ G    +    +        A      G
Sbjct: 187 LPMKEGDCMTIIHREDEDEIEWWWARLNDKEG 218

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B Length = 239

 Score = 51.8 bits (125), Expect = 2e-07
 Identities = 37/242 (15%), Positives = 66/242 (27%), Gaps = 66/242 (27%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           L+ +  +G+   V++++ E        DEG + L  A  AG+ E+ + L+    NV    
Sbjct: 41  LLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD 100

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAA--ALTRMRNENP 119
             G  TPL  AAS              + +V + L       ++  AA  A+T    +  
Sbjct: 101 SDG-WTPLHCAASCN------------NVQVCKFL-------VESGAAVFAMTYSDMQTA 140

Query: 120 RPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 179
                    +   +G  +  + L      +                              
Sbjct: 141 AD-----KCEEMEEGYTQCSQFLYGVQEKMGIMNKGVI---------------------- 173

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGN--TPLMYACAGGHEA 237
                         L +       E   L +  G  +              +A     E 
Sbjct: 174 ------------YALWDYEPQNDDE---LPMKEGDCMTIIHREDEDEIEWWWARLNDKEG 218

Query: 238 VV 239
            V
Sbjct: 219 YV 220

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  170 bits (433), Expect = 2e-48
 Identities = 47/263 (17%), Positives = 78/263 (29%), Gaps = 36/263 (13%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
               +     G            ADV    S   TP   A     E  +  LLE   +V+
Sbjct: 16  AMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAARKADEQALSQLLE-DRDVD 71

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
             +ENG T L+  A  G     ++L E GA ++        +AL +A      ++V  L+
Sbjct: 72  AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALV 131

Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSI 370
             GAD E + +   TAL  A            +  G +                     I
Sbjct: 132 ELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRR---------------------I 170

Query: 371 SYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 430
                 ++++       +  +        + E   +G+ +  L       +   V     
Sbjct: 171 GLEKVINVLEGQVFEYAEVDE--------IVEKRGKGKDVEYLVRWKDGGDCEWVKGVHV 222

Query: 431 ANVEDRGIKGECTPLMEAASSGR 453
           A       K     L  A +   
Sbjct: 223 AEDV---AKDYEDGLEYAVAESV 242

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  164 bits (418), Expect = 2e-46
 Identities = 44/198 (22%), Positives = 74/198 (37%), Gaps = 10/198 (5%)

Query: 151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLI 210
            T  EG     +    G+         + A+V         TP   AA     + +  L+
Sbjct: 10  RTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE----TPWWTAARKADEQALSQLL 65

Query: 211 NHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN-ENGHTPLMEAASAGHV 269
               DV+    +G T L++    G +  VR+L E GA+++  +   G T L  AA     
Sbjct: 66  -EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRP 124

Query: 270 GVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALME 329
            V + L+E GA I    +E   +AL LA            +  G     +       ++E
Sbjct: 125 EVVEALVELGADIE-VEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKV---INVLE 180

Query: 330 ASMDGHVEVAKLLLDSGA 347
             +  + EV +++   G 
Sbjct: 181 GQVFEYAEVDEIVEKRGK 198

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  164 bits (418), Expect = 2e-46
 Identities = 45/252 (17%), Positives = 73/252 (28%), Gaps = 42/252 (16%)

Query: 491 INAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLD 550
           I + T         +    G            A++     TP   AA++   + +  LL 
Sbjct: 7   IGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLL- 65

Query: 551 SGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL------DNSTMLIEAAKGGHAN 604
               V A  + G TAL +    G      LL   GA+L         T L  AA      
Sbjct: 66  EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPE 125

Query: 605 VVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA--NLDNSTMLIEAAKGG 662
           VV+ L++    +  + + G TAL  A E   T      + +G    L+    ++E     
Sbjct: 126 VVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFE 185

Query: 663 HANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHT 722
           +A V +++                                  K   G             
Sbjct: 186 YAEVDEIV---------------------------------EKRGKGKDVEYLVRWKDGG 212

Query: 723 DVADLLLSYGAN 734
           D   +   + A 
Sbjct: 213 DCEWVKGVHVAE 224

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  156 bits (396), Expect = 2e-43
 Identities = 41/222 (18%), Positives = 67/222 (30%), Gaps = 18/222 (8%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
            +    DG   +          V     E E+    A      +    LL    +V+   
Sbjct: 19  YLIEWKDGHSPSWVPSSYIAADVVS---EYETPWWTAARKADEQALSQLLE-DRDVDAVD 74

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSS-SGNTPLMYACAGGHEAVVRVLLEC 245
             G  T L+  A  G  + VRLL   GAD++ +    G T L  A       VV  L+E 
Sbjct: 75  ENG-RTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 133

Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM 305
           GA++E  +E G T L  A            +++G  I           +       + ++
Sbjct: 134 GADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKV----INVLEGQVFEYAEV 189

Query: 306 VRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
              +   G  +                    +   +     A
Sbjct: 190 DEIVEKRGKGK--------DVEYLVRWKDGGDCEWVKGVHVA 223

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  155 bits (394), Expect = 4e-43
 Identities = 50/271 (18%), Positives = 82/271 (30%), Gaps = 47/271 (17%)

Query: 402 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESV 461
            T  EG     +    G+         + A+V         TP   AA    +    +++
Sbjct: 10  RTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE----TPWWTAARKADE----QAL 61

Query: 462 SAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKN 521
           S                      L+    ++A  E    TAL      G       L + 
Sbjct: 62  S---------------------QLLEDRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEA 99

Query: 522 GANIEL----GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDV 577
           GA+++     G  T L  AA     E+V  L++ GA +  + + G TAL  A E   T  
Sbjct: 100 GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTP 159

Query: 578 ADLLLSYGA--NLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGH 635
               + +G    L+    ++E     +A V +++         K   G            
Sbjct: 160 KGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIV--------EKRGKGKDVEYLVRWKDG 211

Query: 636 TDVADLLLSYGANL---DNSTMLIEAAKGGH 663
            D   +   + A     D    L  A     
Sbjct: 212 GDCEWVKGVHVAEDVAKDYEDGLEYAVAESV 242

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  154 bits (391), Expect = 1e-42
 Identities = 42/207 (20%), Positives = 73/207 (35%), Gaps = 15/207 (7%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           A    D + + +LL E R V    + G + L      G  +  ++L    A+++ R ++G
Sbjct: 52  AARKADEQALSQLL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRG 110

Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
             T L  AA     E+V  L+  GAD+  +   G T L  A            ++ G  +
Sbjct: 111 GLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRI 170

Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
                     ++E     +  V +I+ + G G +            L  +K   D     
Sbjct: 171 ---GLEKVINVLEGQVFEYAEVDEIVEKRGKGKD---------VEYLVRWKDGGDCEWVK 218

Query: 310 LSAGADQEHKTDEMHTALMEASMDGHV 336
               A+   K  E    L  A  +  +
Sbjct: 219 GVHVAEDVAKDYE--DGLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  135 bits (343), Expect = 3e-36
 Identities = 45/328 (13%), Positives = 72/328 (21%), Gaps = 95/328 (28%)

Query: 217 NGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILL 276
           +  +  G    +     GH           A+V        TP   AA          LL
Sbjct: 9   SRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAARKADEQALSQLL 65

Query: 277 EYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEM-HTALMEASMDGH 335
           E    ++   +E   +AL      G    VR L  AGAD +H+      TAL  A+    
Sbjct: 66  E-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR 123

Query: 336 VEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLT 395
            EV + L++ GA                                                
Sbjct: 124 PEVVEALVELGA------------------------------------------------ 135

Query: 396 EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQC 455
               +    + G + L LA            +     +    +      ++E        
Sbjct: 136 ---DIEVEDERGLTALELAREILKTTPKGNPMQFGRRIGLEKV----INVLEGQVFEYA- 187

Query: 456 NLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVA 515
                                             +I     +  +    L       D  
Sbjct: 188 -------------------------------EVDEIVEKRGK-GKDVEYLVRWKDGGDCE 215

Query: 516 DFLLKNGANI-ELGASTPLMEAAQEGHL 542
                + A          L  A  E  +
Sbjct: 216 WVKGVHVAEDVAKDYEDGLEYAVAESVI 243

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  123 bits (312), Expect = 5e-32
 Identities = 50/350 (14%), Positives = 74/350 (21%), Gaps = 111/350 (31%)

Query: 256 GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD 315
           G    +  +     G                         +    GH           AD
Sbjct: 1   GEVNKIIGSRTAGEGA------------ME--------YLIEWKDGHSPSWVPSSYIAAD 40

Query: 316 QEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYS 375
                 E  T    A+     +    LL                                
Sbjct: 41  ---VVSEYETPWWTAARKADEQALSQLL-------------------------------- 65

Query: 376 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 435
                               E R V    + G + L      G  +  ++L    A+++ 
Sbjct: 66  --------------------EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDH 105

Query: 436 RGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHT 495
           R ++G  T L  AA   R     E V A                        GA I    
Sbjct: 106 RDMRGGLTALHMAAGYVRP----EVVEALVEL--------------------GADIEVED 141

Query: 496 EETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQV 555
           E    TAL LA            ++ G  I L     ++E     + E+   +   G   
Sbjct: 142 ER-GLTALELAREILKTTPKGNPMQFGRRIGLEKVINVLEGQVFEYAEVDEIVEKRGK-- 198

Query: 556 HAKTQTGDTALTYACENGHTDVADLLLSYGANL---DNSTMLIEAAKGGH 602
                 G             D   +   + A     D    L  A     
Sbjct: 199 ------GKDVEYLVRWKDGGDCEWVKGVHVAEDVAKDYEDGLEYAVAESV 242

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score =  108 bits (273), Expect = 8e-27
 Identities = 39/323 (12%), Positives = 73/323 (22%), Gaps = 93/323 (28%)

Query: 253 NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312
              G    +     GH           A + +      E+    A  K     +  LL  
Sbjct: 12  AGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSE----YETPWWTAARKADEQALSQLLE- 66

Query: 313 GADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISY 372
             D +   +   TAL+  +  G  +  +L                               
Sbjct: 67  DRDVDAVDENGRTALLFVAGLGSDKCVRL------------------------------- 95

Query: 373 TYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHA 431
                               L   G  +       G + L +A      E+ + L+ + A
Sbjct: 96  --------------------LAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGA 135

Query: 432 NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKI 491
           ++E    +G  T L  A    +            +                     G +I
Sbjct: 136 DIEVEDERGL-TALELAREILK----TTPKGNPMQF--------------------GRRI 170

Query: 492 NAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDS 551
                  +   +       + +V + + K G                +   +        
Sbjct: 171 GLE----KVINVLEGQVFEYAEVDEIVEKRGKG-----KDVEYLVRWKDGGDCEWVKGVH 221

Query: 552 GAQVHAKTQTGDTALTYACENGH 574
            A+  AK    +  L YA     
Sbjct: 222 VAEDVAK--DYEDGLEYAVAESV 242

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A Length = 244

 Score = 83.8 bits (208), Expect = 3e-18
 Identities = 36/271 (13%), Positives = 66/271 (24%), Gaps = 47/271 (17%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
            +    DG   +          V     E E+    A      +    LL    +V+   
Sbjct: 19  YLIEWKDGHSPSWVPSSYIAADVVS---EYETPWWTAARKADEQALSQLLE-DRDVDAVD 74

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
             G  T L+  A  G  K            +L           +  A       + + R 
Sbjct: 75  ENG-RTALLFVAGLGSDKCV---------RLL----------AEAGA-------DLDHRD 107

Query: 122 QNERS--LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 179
                  L  A      + V+ L+  G  +    + G + L LA            +   
Sbjct: 108 MRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFG 167

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239
             +    +      ++E     + E+  ++   G         G                
Sbjct: 168 RRIGLEKV----INVLEGQVFEYAEVDEIVEKRGK--------GKDVEYLVRWKDGGDCE 215

Query: 240 RVLLECGANVEDHNENGHTPLMEAASAGHVG 270
            V     A      ++    L  A +   +G
Sbjct: 216 WVKGVHVAED--VAKDYEDGLEYAVAESVIG 244

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  167 bits (426), Expect = 2e-48
 Identities = 44/158 (27%), Positives = 65/158 (41%), Gaps = 2/158 (1%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGA-DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
              +      G    VRL +++   D+N     G +PL +AC  G  AVV +L+  GA +
Sbjct: 6   MDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARI 65

Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
              N    TPL  AAS GH  + + LL+Y A IN   NE     L  AC+ G   +   L
Sbjct: 66  NVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINA-VNEHGNVPLHYACFWGQDQVAEDL 124

Query: 310 LSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           ++ GA            + +A       + +     G 
Sbjct: 125 VANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 162

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  160 bits (408), Expect = 6e-46
 Identities = 43/183 (23%), Positives = 73/183 (39%), Gaps = 7/183 (3%)

Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           + E    +   C  G     ++ L    N  ++G     +PL  A   G   +V +LI  
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMR 61

Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GA +N  +   +TPL  A + GH  +V+ LL+  A++   NE+G+ PL  A   G   VA
Sbjct: 62  GARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVA 121

Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASM 332
           + L+  GA ++   N++ E  +  A       +       G +             +   
Sbjct: 122 EDLVANGALVSI-CNKYGEMPVDKAKAPLRELLRERAEKMGQNLN------RIPYKDTFW 174

Query: 333 DGH 335
            G 
Sbjct: 175 KGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  155 bits (394), Expect = 7e-44
 Identities = 39/172 (22%), Positives = 62/172 (36%), Gaps = 10/172 (5%)

Query: 501 TALTLACCGGFLDVADFLLKNGAN-IELGAS---TPLMEAAQEGHLELVRYLLDSGAQVH 556
             +   C  G        L N  N +  G     +PL  A +EG   +V  L+  GA+++
Sbjct: 7   DDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN 66

Query: 557 AKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLD 611
              +  DT L  A  +GH D+   LL Y A++       +  L  A   G   V + L+ 
Sbjct: 67  VMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVA 126

Query: 612 FPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGH 663
               V    + G+  +  A       + +     G NL N     +    G 
Sbjct: 127 NGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNL-NRIPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  154 bits (391), Expect = 1e-43
 Identities = 48/178 (26%), Positives = 79/178 (44%), Gaps = 9/178 (5%)

Query: 127 LVQACSDGDVKTVKKLLTEG-RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 185
           +   C +G+   V+  L      +++  D G S L  AC  G   + ++L+   A +   
Sbjct: 9   IFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVM 68

Query: 186 GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245
             +G+ TPL  AAS G  +IV+ L+ + AD+N  +  GN PL YAC  G + V   L+  
Sbjct: 69  N-RGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVAN 127

Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHL 303
           GA V   N+ G  P+ +A +     + +   + G  +N               +KG  
Sbjct: 128 GALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQNLN-------RIPYKDTFWKGTT 178

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  151 bits (385), Expect = 9e-43
 Identities = 45/215 (20%), Positives = 74/215 (34%), Gaps = 60/215 (27%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQ-VHAKTQTGDTALTYACENGHTDVADLLLSYGANL- 588
             +    +EG+   VR  LD+    ++     G + L +AC  G + V ++L+  GA + 
Sbjct: 7   DDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARIN 66

Query: 589 ----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLS 644
                + T L  AA  GH ++VQ LL +   ++A  + G+  L YAC  G   VA+ L++
Sbjct: 67  VMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVA 126

Query: 645 YGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHA 704
            GA                                                      V  
Sbjct: 127 NGAL-----------------------------------------------------VSI 133

Query: 705 KTQTGDTALTYACENGHTDVADLLLSYGANLRNRT 739
             + G+  +  A       + +     G NL NR 
Sbjct: 134 CNKYGEMPVDKAKAPLRELLRERAEKMGQNL-NRI 167

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  130 bits (329), Expect = 4e-35
 Identities = 37/126 (29%), Positives = 59/126 (46%), Gaps = 2/126 (1%)

Query: 223 GNTPLMYACAGGHEAVVRVLLECGAN-VEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
               +   C  G+   VR+ L+   N +   +++G +PL  A   G   V ++L+  GA 
Sbjct: 5   FMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGAR 64

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKL 341
           IN   N   ++ L LA   GH D+V+ LL   AD     +  +  L  A   G  +VA+ 
Sbjct: 65  INV-MNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAED 123

Query: 342 LLDSGA 347
           L+ +GA
Sbjct: 124 LVANGA 129

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  125 bits (316), Expect = 3e-33
 Identities = 45/204 (22%), Positives = 69/204 (33%), Gaps = 33/204 (16%)

Query: 404 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSA 463
           + E    +   C  G     ++ L    N  ++G     +PL  A   GR       V  
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRS----AVVE- 56

Query: 464 YARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNG 522
                               +LI  GA+IN       +T L LA   G  D+   LL+  
Sbjct: 57  --------------------MLIMRGARINVMNRG-DDTPLHLAASHGHRDIVQKLLQYK 95

Query: 523 ANI----ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVA 578
           A+I    E G + PL  A   G  ++   L+ +GA V    + G+  +  A       + 
Sbjct: 96  ADINAVNEHG-NVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLR 154

Query: 579 DLLLSYGANLDNSTMLIEAAKGGH 602
           +     G NL N     +    G 
Sbjct: 155 ERAEKMGQNL-NRIPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  113 bits (286), Expect = 3e-29
 Identities = 37/202 (18%), Positives = 61/202 (30%), Gaps = 27/202 (13%)

Query: 253 NENGHTPLMEAASAGHVGVAKILLEYGAG-INTHSNEFKESALTLACYKGHLDMVRFLLS 311
           +      +      G+    ++ L+     +N   ++   S L  AC +G   +V  L+ 
Sbjct: 2   SPEFMDDIFTQCREGNAVAVRLWLDNTENDLN-QGDDHGFSPLHWACREGRSAVVEMLIM 60

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSIS 371
            GA          T L  A+  GH ++ + LL   A             N   E      
Sbjct: 61  RGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKAD-----------INAVNEH----G 105

Query: 372 YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 431
                 L  AC  G  +  + L+  G  V      GE  +  A +     L +    M  
Sbjct: 106 NV---PLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMGQ 162

Query: 432 NVEDRGIKGECTPLMEAASSGR 453
           N+          P  +    G 
Sbjct: 163 NLNR-------IPYKDTFWKGT 177

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score =  110 bits (279), Expect = 3e-28
 Identities = 38/152 (25%), Positives = 63/152 (41%), Gaps = 31/152 (20%)

Query: 589 DNSTMLIEAAKGGHANVVQLLLDF-PRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA 647
           +    +    + G+A  V+L LD     ++     G + L +AC  G + V ++L+  GA
Sbjct: 4   EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGA 63

Query: 648 NL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGV 702
            +      + T L  AA  GH ++VQ LL                           K+ +
Sbjct: 64  RINVMNRGDDTPLHLAASHGHRDIVQKLLQ-------------------------YKADI 98

Query: 703 HAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
           +A  + G+  L YAC  G   VA+ L++ GA 
Sbjct: 99  NAVNEHGNVPLHYACFWGQDQVAEDLVANGAL 130

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 97.5 bits (244), Expect = 1e-23
 Identities = 39/218 (17%), Positives = 70/218 (32%), Gaps = 46/218 (21%)

Query: 325 TALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSD 384
             +     +G+    +L LD+    ++    H F P                 L  AC +
Sbjct: 7   DDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSP-----------------LHWACRE 49

Query: 385 GDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTP 444
           G    V+ L+  G  ++      ++ L LA S G+ ++ Q LL   A++      G   P
Sbjct: 50  GRSAVVEMLIMRGARINVMNRGDDTPLHLAASHGHRDIVQKLLQYKADINAVNEHG-NVP 108

Query: 445 LMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALT 504
           L  A   G+                      V    A  ++  GA ++   +   E  + 
Sbjct: 109 LHYACFWGQ--------------------DQV----AEDLVANGALVSICNKY-GEMPVD 143

Query: 505 LACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHL 542
            A       + +   K G N+      P  +   +G  
Sbjct: 144 KAKAPLRELLRERAEKMGQNLN---RIPYKDTFWKGTT 178

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A Length = 179

 Score = 59.0 bits (144), Expect = 3e-10
 Identities = 39/240 (16%), Positives = 64/240 (26%), Gaps = 77/240 (32%)

Query: 2   LVQACSDGDVKTVKKLLTEG-RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 60
           +   C +G+   V+  L      +++  D G S L  AC  G   + ++L+   A +   
Sbjct: 9   IFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVM 68

Query: 61  GIKGECTPLMEAASSGFGKLATGDGKL-----ADPEVLRRLTSSVSCALDEAAAALTRMR 115
             +G+ TPL  AAS G   +     +      AD                          
Sbjct: 69  N-RGDDTPLHLAASHGHRDIV----QKLLQYKADINA----------------------V 101

Query: 116 NENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVL 175
           NE+        L  AC  G  +  + L+  G  V      GE  +  A            
Sbjct: 102 NEH----GNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKA------------ 145

Query: 176 LAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH 235
                                  +     +       G ++N        P       G 
Sbjct: 146 ----------------------KAPLRELLRERAEKMGQNLN------RIPYKDTFWKGT 177

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  166 bits (423), Expect = 4e-48
 Identities = 51/157 (32%), Positives = 77/157 (49%), Gaps = 3/157 (1%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
             L  AA+ G +E +  L+ +  +VN Q+  G T L      G+  + R LL  GAN + 
Sbjct: 7   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVM-KLGNPEIARRLLLRGANPDL 65

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
            +  G   + +AA AG +   + LLE+ A +N   NE     L LA  +GHL +V FL+ 
Sbjct: 66  KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNE-GNLPLHLAAKEGHLRVVEFLVK 124

Query: 312 AGA-DQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
             A +  H+  +  TA   A + G  EV  L+  +GA
Sbjct: 125 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  151 bits (384), Expect = 8e-43
 Identities = 45/163 (27%), Positives = 74/163 (45%), Gaps = 4/163 (2%)

Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
            +   + L+ A + G  E    LL  + NV  +   G  T L      G  EI R L+  
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFG-RTALQ-VMKLGNPEIARRLLLR 59

Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GA+ + +  +G   +  A   G    ++ LLE  A+V   +  G+ PL  AA  GH+ V 
Sbjct: 60  GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVV 119

Query: 273 KILLEYGAG-INTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
           + L+++ A  +  H N   ++A  LA   G  ++V  + + GA
Sbjct: 120 EFLVKHTASNVG-HRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  144 bits (365), Expect = 3e-40
 Identities = 46/157 (29%), Positives = 66/157 (42%), Gaps = 10/157 (6%)

Query: 500 ETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVRYLLDSGAQVH 556
              L  A   G L+    LL+N  N+        T L    + G+ E+ R LL  GA   
Sbjct: 6   GNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQ-VMKLGNPEIARRLLLRGANPD 64

Query: 557 AKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLD 611
            K +TG   +  A   G  D    LL + A++     + +  L  AAK GH  VV+ L+ 
Sbjct: 65  LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 124

Query: 612 F-PRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA 647
               +V  +   GDTA   A   G  +V  L+ + GA
Sbjct: 125 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  142 bits (361), Expect = 1e-39
 Identities = 51/208 (24%), Positives = 71/208 (34%), Gaps = 58/208 (27%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
             L  AA  G LE +  LL +   V+A+   G TAL      G+ ++A  LL  GAN   
Sbjct: 7   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGAN--- 62

Query: 591 STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL- 649
                                       K +TG   +  A   G  D    LL + A++ 
Sbjct: 63  -------------------------PDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVN 97

Query: 650 ----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAK 705
               + +  L  AAK GH  VV+ L+                            S V  +
Sbjct: 98  IEDNEGNLPLHLAAKEGHLRVVEFLV-----------------------KHTA-SNVGHR 133

Query: 706 TQTGDTALTYACENGHTDVADLLLSYGA 733
              GDTA   A   G  +V  L+ + GA
Sbjct: 134 NHKGDTACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  134 bits (341), Expect = 7e-37
 Identities = 47/153 (30%), Positives = 73/153 (47%), Gaps = 3/153 (1%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           A + GD++ +  LL    +V+     G + L +    G  E+A+ LL   AN + +   G
Sbjct: 12  AAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVM-KLGNPEIARRLLLRGANPDLKDRTG 70

Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-N 248
               + +AA +GF++ ++ L+   ADVN + + GN PL  A   GH  VV  L++  A N
Sbjct: 71  F-AVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASN 129

Query: 249 VEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
           V   N  G T    A   G   V  ++   GAG
Sbjct: 130 VGHRNHKGDTACDLARLYGRNEVVSLMQANGAG 162

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  113 bits (286), Expect = 2e-29
 Identities = 44/188 (23%), Positives = 68/188 (36%), Gaps = 33/188 (17%)

Query: 404 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSA 463
            +   + L+ A + G  E    LL  + NV  +   G  T L                  
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFG-RTALQVMKL------------- 47

Query: 464 YARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNG 522
                           + +  L+  GA  +          +  A   GFLD    LL+  
Sbjct: 48  -------------GNPEIARRLLLRGANPDLKDRT-GFAVIHDAARAGFLDTLQTLLEFQ 93

Query: 523 ANIELG---ASTPLMEAAQEGHLELVRYLLDSGAQ-VHAKTQTGDTALTYACENGHTDVA 578
           A++ +     + PL  AA+EGHL +V +L+   A  V  +   GDTA   A   G  +V 
Sbjct: 94  ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVV 153

Query: 579 DLLLSYGA 586
            L+ + GA
Sbjct: 154 SLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score =  100 bits (253), Expect = 5e-25
 Identities = 42/202 (20%), Positives = 67/202 (33%), Gaps = 55/202 (27%)

Query: 253 NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312
            E     L  AA+ G +     LL+    +N   N F  +AL +    G+ ++ R LL  
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNA-QNGFGRTALQVMKL-GNPEIARRLLLR 59

Query: 313 GADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISY 372
           GA+ + K       + +A+  G ++  + LL+  A                         
Sbjct: 60  GANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQAD------------------------ 95

Query: 373 TYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA- 431
                                      V+   +EG   L LA   G+  + + L+   A 
Sbjct: 96  ---------------------------VNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTAS 128

Query: 432 NVEDRGIKGECTPLMEAASSGR 453
           NV  R  KG+ T    A   GR
Sbjct: 129 NVGHRNHKGD-TACDLARLYGR 149

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 95.1 bits (238), Expect = 5e-23
 Identities = 34/150 (22%), Positives = 54/150 (36%), Gaps = 31/150 (20%)

Query: 589 DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
                L  AA  G    +  LL    +V+A+   G TAL      G+ ++A  LL  GAN
Sbjct: 4   PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGAN 62

Query: 649 L-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVH 703
                     ++ +AA+ G  + +Q LL                              V+
Sbjct: 63  PDLKDRTGFAVIHDAARAGFLDTLQTLL-----------------------EFQAD--VN 97

Query: 704 AKTQTGDTALTYACENGHTDVADLLLSYGA 733
            +   G+  L  A + GH  V + L+ + A
Sbjct: 98  IEDNEGNLPLHLAAKEGHLRVVEFLVKHTA 127

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 75.5 bits (187), Expect = 4e-16
 Identities = 43/233 (18%), Positives = 65/233 (27%), Gaps = 81/233 (34%)

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA 352
            L  A  +G L+ +  LL    +   +     TAL    + G+ E+A+ LL  GA     
Sbjct: 8   ELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGAN---- 62

Query: 353 YARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS 412
                                                                 G +++ 
Sbjct: 63  -----------------------------------------------PDLKDRTGFAVIH 75

Query: 413 LACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPN 472
            A  AG+ +  Q LL   A+V     +G   PL  AA  G                    
Sbjct: 76  DAARAGFLDTLQTLLEFQADVNIEDNEG-NLPLHLAAKEGH------------------- 115

Query: 473 DKSVNGLQASVILIP-GAK-INAHTEETQETALTLACCGGFLDVADFLLKNGA 523
                 L+    L+   A  +     +   TA  LA   G  +V   +  NGA
Sbjct: 116 ------LRVVEFLVKHTASNVGHRNHKGD-TACDLARLYGRNEVVSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 65.9 bits (162), Expect = 8e-13
 Identities = 47/189 (24%), Positives = 72/189 (38%), Gaps = 31/189 (16%)

Query: 28  TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKL 87
            +   + L+ A + G  E    LL  + NV  +   G  T L      G           
Sbjct: 2   AEPWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFG-RTALQ-VMKLG----------- 48

Query: 88  ADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNER-SLVQACSDGDVKTVKKLLTEG 146
            +PE+ RRL       L   A       N + + +     +  A   G + T++ LL   
Sbjct: 49  -NPEIARRL-------LLRGA-------NPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQ 93

Query: 147 RSVHETTDEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIKGECTPLMEAASSGFIEI 205
             V+   +EG   L LA   G+  + + L+   A NV  R  KG+ T    A   G  E+
Sbjct: 94  ADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGD-TACDLARLYGRNEV 152

Query: 206 VRLLINHGA 214
           V L+  +GA
Sbjct: 153 VSLMQANGA 161

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A Length = 162

 Score = 41.6 bits (99), Expect = 2e-04
 Identities = 19/70 (27%), Positives = 31/70 (44%), Gaps = 1/70 (1%)

Query: 7   SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGEC 66
             G+ +  ++LL  G +       G +++  A  AG+ +  Q LL   A+V     +G  
Sbjct: 46  KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEG-N 104

Query: 67  TPLMEAASSG 76
            PL  AA  G
Sbjct: 105 LPLHLAAKEG 114

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  164 bits (418), Expect = 3e-47
 Identities = 38/158 (24%), Positives = 57/158 (36%), Gaps = 4/158 (2%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
               +     G            ADV    S   TP   A     E  +  LLE   +V+
Sbjct: 15  AMEYLIEWKDGHSPSWVPSSYIAADVV---SEYETPWWTAARKADEQALSQLLE-DRDVD 70

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
             +ENG T L+  A  G     ++L E GA ++        +AL +A      ++V  L+
Sbjct: 71  AVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALV 130

Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQ 348
             GAD E + +   TAL  A            +  G +
Sbjct: 131 ELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRR 168

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  156 bits (398), Expect = 2e-44
 Identities = 42/195 (21%), Positives = 67/195 (34%), Gaps = 24/195 (12%)

Query: 151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLI 210
            T  EG     +    G+         + A+V         TP   AA     + +  L+
Sbjct: 9   RTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEY----ETPWWTAARKADEQALSQLL 64

Query: 211 NHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN-ENGHTPLMEAASAGHV 269
               DV+    +G T L++    G +  VR+L E GA+++  +   G T L  AA     
Sbjct: 65  -EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRP 123

Query: 270 GVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALME 329
            V + L+E GA I    +E   +AL LA            +  G     +          
Sbjct: 124 EVVEALVELGADIE-VEDERGLTALELAREILKTTPKGNPMQFGRRIGLE---------- 172

Query: 330 ASMDGHVEVAKLLLD 344
                  +V  +L  
Sbjct: 173 -------KVINVLEG 180

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  151 bits (384), Expect = 2e-42
 Identities = 40/191 (20%), Positives = 62/191 (32%), Gaps = 19/191 (9%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRY 547
              I + T         +    G            A++     TP   AA++   + +  
Sbjct: 3   NKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQ 62

Query: 548 LLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL------DNSTMLIEAAKGG 601
           LL     V A  + G TAL +    G      LL   GA+L         T L  AA   
Sbjct: 63  LL-EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV 121

Query: 602 HANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKG 661
              VV+ L++    +  + + G TAL  A E   T      + +G  +            
Sbjct: 122 RPEVVEALVELGADIEVEDERGLTALELAREILKTTPKGNPMQFGRRI------------ 169

Query: 662 GHANVVQLLLD 672
           G   V+ +L  
Sbjct: 170 GLEKVINVLEG 180

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  136 bits (344), Expect = 5e-37
 Identities = 40/187 (21%), Positives = 60/187 (32%), Gaps = 24/187 (12%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
            +    DG   +          V     E E+    A      +    LL    +V+   
Sbjct: 18  YLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAARKADEQALSQLLE-DRDVDAVD 73

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQ-SSSGNTPLMYACAGGHEAVVRVLLEC 245
             G  T L+  A  G  + VRLL   GAD++ +    G T L  A       VV  L+E 
Sbjct: 74  ENG-RTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVRPEVVEALVEL 132

Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM 305
           GA++E  +E G T L  A            +++G  I                      +
Sbjct: 133 GADIEVEDERGLTALELAREILKTTPKGNPMQFGRRIG------------------LEKV 174

Query: 306 VRFLLSA 312
           +  L   
Sbjct: 175 INVLEGQ 181

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  129 bits (327), Expect = 1e-34
 Identities = 33/136 (24%), Positives = 47/136 (34%), Gaps = 6/136 (4%)

Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
               +  +  G    +     GH           A+V        TP   AA        
Sbjct: 4   KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAARKADEQAL 60

Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEM-HTALMEAS 331
             LLE    ++   +E   +AL      G    VR L  AGAD +H+      TAL  A+
Sbjct: 61  SQLLE-DRDVDA-VDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA 118

Query: 332 MDGHVEVAKLLLDSGA 347
                EV + L++ GA
Sbjct: 119 GYVRPEVVEALVELGA 134

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  127 bits (322), Expect = 4e-34
 Identities = 42/214 (19%), Positives = 68/214 (31%), Gaps = 46/214 (21%)

Query: 402 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESV 461
            T  EG     +    G+         + A+V         TP   AA    +    +++
Sbjct: 9   RTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEY----ETPWWTAARKADE----QAL 60

Query: 462 SAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKN 521
           S                      L+    ++A  E    TAL      G       L + 
Sbjct: 61  S---------------------QLLEDRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEA 98

Query: 522 GANIEL----GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDV 577
           GA+++     G  T L  AA     E+V  L++ GA +  + + G TAL  A E   T  
Sbjct: 99  GADLDHRDMRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGLTALELAREILKTTP 158

Query: 578 ADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLD 611
               + +G  +            G   V+ +L  
Sbjct: 159 KGNPMQFGRRI------------GLEKVINVLEG 180

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score =  102 bits (256), Expect = 3e-25
 Identities = 28/205 (13%), Positives = 45/205 (21%), Gaps = 86/205 (41%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
              +   ++GH           A V ++    +T    A           LL    +   
Sbjct: 16  MEYLIEWKDGHSPSWVPSSYIAADVVSE---YETPWWTAARKADEQALSQLLE-DRD--- 68

Query: 591 STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
                                    V A  + G TAL +    G      LL   G    
Sbjct: 69  -------------------------VDAVDENGRTALLFVAGLGSDKCVRLLAEAG---- 99

Query: 651 NSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAK-TQTG 709
                        A++                                      +  + G
Sbjct: 100 -------------ADL------------------------------------DHRDMRGG 110

Query: 710 DTALTYACENGHTDVADLLLSYGAN 734
            TAL  A      +V + L+  GA+
Sbjct: 111 LTALHMAAGYVRPEVVEALVELGAD 135

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 84.5 bits (210), Expect = 4e-19
 Identities = 39/274 (14%), Positives = 63/274 (22%), Gaps = 94/274 (34%)

Query: 277 EYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHV 336
           E    I + +         +    GH           AD   + +   T    A+     
Sbjct: 1   EVNKIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSEYE---TPWWTAARKADE 57

Query: 337 EVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTE 396
           +    LL                                                    E
Sbjct: 58  QALSQLL----------------------------------------------------E 65

Query: 397 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCN 456
            R V    + G + L      G  +  ++L    A+++ R ++G  T L  AA   R   
Sbjct: 66  DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR--- 122

Query: 457 LNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVAD 516
                              V       ++  GA I    E    TAL LA          
Sbjct: 123 -----------------PEV----VEALVELGADIEVEDERGL-TALELAREILKTTPKG 160

Query: 517 FLLKNGANIELGASTPLMEAAQEGHLELVRYLLD 550
             ++ G  I              G  +++  L  
Sbjct: 161 NPMQFGRRI--------------GLEKVINVLEG 180

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 83.3 bits (207), Expect = 1e-18
 Identities = 28/209 (13%), Positives = 50/209 (23%), Gaps = 58/209 (27%)

Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM 305
                     G    +     GH           A + +      E+    A  K     
Sbjct: 4   KIIGSRTAGEGAMEYLIEWKDGHSPSWVPSSYIAADVVSE----YETPWWTAARKADEQA 59

Query: 306 VRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCE 365
           +  LL    D +   +   TAL+  +  G  +  +L                        
Sbjct: 60  LSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRL------------------------ 94

Query: 366 RPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQ 424
                                      L   G  +       G + L +A      E+ +
Sbjct: 95  ---------------------------LAEAGADLDHRDMRGGLTALHMAAGYVRPEVVE 127

Query: 425 VLLAMHANVEDRGIKGECTPLMEAASSGR 453
            L+ + A++E    +G  T L  A    +
Sbjct: 128 ALVELGADIEVEDERGL-TALELAREILK 155

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 82.2 bits (204), Expect = 3e-18
 Identities = 20/114 (17%), Positives = 32/114 (28%), Gaps = 28/114 (24%)

Query: 623 GDTALTYACENGHTDVADLLLSYGANLDN--STMLIEAAKGGHANVVQLLLDFPRSVIGG 680
           G        ++GH+          A++ +   T    AA+      +  LL         
Sbjct: 14  GAMEYLIEWKDGHSPSWVPSSYIAADVVSEYETPWWTAARKADEQALSQLL--------- 64

Query: 681 SLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                            +   V A  + G TAL +    G      LL   GA+
Sbjct: 65  -----------------EDRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGAD 101

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A Length = 183

 Score = 55.2 bits (134), Expect = 6e-09
 Identities = 32/245 (13%), Positives = 51/245 (20%), Gaps = 84/245 (34%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
            +    DG   +          V     E E+    A      +    LL    +V+   
Sbjct: 18  YLIEWKDGHSPSWVPSSYIAADV---VSEYETPWWTAARKADEQALSQLLE-DRDVDAVD 73

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
             G  T L+  A  G  K            +L           +  A       + + R 
Sbjct: 74  ENG-RTALLFVAGLGSDKCV---------RLL----------AEAGA-------DLDHRD 106

Query: 122 QNERS--LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 179
                  L  A      + V+ L+  G  +    + G                       
Sbjct: 107 MRGGLTALHMAAGYVRPEVVEALVELGADIEVEDERGL---------------------- 144

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239
                       T L  A            +  G  +                   E V+
Sbjct: 145 ------------TALELAREILKTTPKGNPMQFGRRIG-----------------LEKVI 175

Query: 240 RVLLE 244
            VL  
Sbjct: 176 NVLEG 180

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  161 bits (409), Expect = 3e-46
 Identities = 41/158 (25%), Positives = 69/158 (43%), Gaps = 5/158 (3%)

Query: 188 KGECTPLMEAASSGFIEIVR-LLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
           +     L  AA+ G ++ VR LL       +  +  G T L      G  A+   LL+ G
Sbjct: 1   RAG-DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVM-MFGSTAIALELLKQG 58

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
           A+    + +G +P+ +AA  G +   K+L+E+GA +N          + LA  +GH  +V
Sbjct: 59  ASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT-GALPIHLAVQEGHTAVV 117

Query: 307 RFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344
            FL +  +D   +     T L  A   G  ++  +L  
Sbjct: 118 SFLAA-ESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  141 bits (357), Expect = 4e-39
 Identities = 41/153 (26%), Positives = 63/153 (41%), Gaps = 5/153 (3%)

Query: 160 LSLACSAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNG 218
           LS A + G  +  + LL     + +     G  T L      G   I   L+  GA  N 
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFG-KTALQ-VMMFGSTAIALELLKQGASPNV 63

Query: 219 QSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278
           Q +SG +P+  A   G    ++VL+E GA+V   +  G  P+  A   GH  V   L   
Sbjct: 64  QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA- 122

Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
            + ++   +    + L LA  +G  D+V  L  
Sbjct: 123 ESDLH-RRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  138 bits (350), Expect = 3e-38
 Identities = 43/206 (20%), Positives = 67/206 (32%), Gaps = 61/206 (29%)

Query: 531 TPLMEAAQEGHLELVRYLLDS-GAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 589
             L  AA  G ++ VR LL        A  + G TAL      G T +A  LL  GA+  
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGAS-- 60

Query: 590 NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 649
                                      + +  +G + +  A   G  D   +L+ +GA++
Sbjct: 61  --------------------------PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV 94

Query: 650 -----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHA 704
                  +  +  A + GH  VV  L                            +S +H 
Sbjct: 95  NVPDGTGALPIHLAVQEGHTAVVSFLA--------------------------AESDLHR 128

Query: 705 KTQTGDTALTYACENGHTDVADLLLS 730
           +   G T L  A + G  D+ D+L  
Sbjct: 129 RDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  124 bits (314), Expect = 3e-33
 Identities = 33/126 (26%), Positives = 46/126 (36%), Gaps = 4/126 (3%)

Query: 223 GNTPLMYACAGGHEAVVRVLLE-CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
               L  A A G    VR LL     + +  N  G T L      G   +A  LL+ GA 
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQ-VMMFGSTAIALELLKQGAS 60

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKL 341
            N   +    S +  A   G LD ++ L+  GAD           +  A  +GH  V   
Sbjct: 61  PNV-QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSF 119

Query: 342 LLDSGA 347
           L  + +
Sbjct: 120 LA-AES 124

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score =  121 bits (307), Expect = 2e-32
 Identities = 42/209 (20%), Positives = 75/209 (35%), Gaps = 58/209 (27%)

Query: 439 KGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEET 498
           +     L  AA+ G                   + + V      ++       +A     
Sbjct: 1   RAG-DRLSGAAARG-------------------DVQEV----RRLLHRELVHPDA-LNRF 35

Query: 499 QETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVRYLLDSGAQV 555
            +TAL +   G    +A  LLK GA+  +     ++P+ +AA+ G L+ ++ L++ GA V
Sbjct: 36  GKTALQVMMFGS-TAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADV 94

Query: 556 HAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRS 615
           +    TG   +  A + GHT V   L +                   ++           
Sbjct: 95  NVPDGTGALPIHLAVQEGHTAVVSFLAA------------------ESD----------- 125

Query: 616 VHAKTQTGDTALTYACENGHTDVADLLLS 644
           +H +   G T L  A + G  D+ D+L  
Sbjct: 126 LHRRDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 92.9 bits (232), Expect = 3e-22
 Identities = 33/146 (22%), Positives = 49/146 (33%), Gaps = 35/146 (23%)

Query: 132 SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGEC 191
             G      +LL +G S +     G S +  A   G+ +  +                  
Sbjct: 44  MFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLK------------------ 85

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
                           +L+ HGADVN    +G  P+  A   GH AVV  L    +++  
Sbjct: 86  ----------------VLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHR 128

Query: 252 HNENGHTPLMEAASAGHVGVAKILLE 277
            +  G TPL  A   G   +  IL  
Sbjct: 129 RDARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 87.9 bits (219), Expect = 2e-20
 Identities = 43/205 (20%), Positives = 71/205 (34%), Gaps = 61/205 (29%)

Query: 381 ACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK 439
           A + GDV+ V++LL  E          G++ L +    G   +A  LL   A+   +   
Sbjct: 9   AAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTS 67

Query: 440 GECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEET 498
           G  +P+ +AA +G                          L    +L+  GA +N      
Sbjct: 68  G-TSPVHDAARTGF-------------------------LDTLKVLVEHGADVNVPD--- 98

Query: 499 QETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAK 558
                                  G       + P+  A QEGH  +V +L  + + +H +
Sbjct: 99  ---------------------GTG-------ALPIHLAVQEGHTAVVSFLA-AESDLHRR 129

Query: 559 TQTGDTALTYACENGHTDVADLLLS 583
              G T L  A + G  D+ D+L  
Sbjct: 130 DARGLTPLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 75.5 bits (187), Expect = 3e-16
 Identities = 41/259 (15%), Positives = 62/259 (23%), Gaps = 110/259 (42%)

Query: 293 ALTLACYKGHLDMVRFLL-SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVS 351
            L+ A  +G +  VR LL       +       TAL      G   +A  LL  GA    
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGA---- 59

Query: 352 AYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL 411
                                                          S +     G S +
Sbjct: 60  -----------------------------------------------SPNVQDTSGTSPV 72

Query: 412 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFP 471
             A   G+ +  +VL+   A+V      G   P+  A   G     + +V ++       
Sbjct: 73  HDAARTGFLDTLKVLVEHGADVNVPDGTG-ALPIHLAVQEG-----HTAVVSF------- 119

Query: 472 NDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAST 531
                        L   + ++                             G        T
Sbjct: 120 -------------LAAESDLHRRD------------------------ARG-------LT 135

Query: 532 PLMEAAQEGHLELVRYLLD 550
           PL  A Q G  +LV  L  
Sbjct: 136 PLELALQRGAQDLVDILQG 154

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 73.2 bits (181), Expect = 2e-15
 Identities = 25/174 (14%), Positives = 39/174 (22%), Gaps = 83/174 (47%)

Query: 562 GDTALTYACENGHTD-VADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKT 620
               L+ A   G    V  LL     +                              A  
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVH----------------------------PDALN 33

Query: 621 QTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGG 680
           + G TAL      G T +A  LL  GA+                                
Sbjct: 34  RFGKTALQVMM-FGSTAIALELLKQGAS-------------------------------- 60

Query: 681 SLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                                 + +  +G + +  A   G  D   +L+ +GA+
Sbjct: 61  ---------------------PNVQDTSGTSPVHDAARTGFLDTLKVLVEHGAD 93

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 62.0 bits (152), Expect = 1e-11
 Identities = 23/83 (27%), Positives = 37/83 (44%), Gaps = 2/83 (2%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           A   G + T+K L+  G  V+     G   + LA   G+  +   L A  +++  R  +G
Sbjct: 75  AARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHRRDARG 133

Query: 190 ECTPLMEAASSGFIEIVRLLINH 212
             TPL  A   G  ++V +L  H
Sbjct: 134 L-TPLELALQRGAQDLVDILQGH 155

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 46.3 bits (111), Expect = 5e-06
 Identities = 20/72 (27%), Positives = 31/72 (43%), Gaps = 2/72 (2%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A   G + T+K L+  G  V+     G   + LA   G+  +   L A  +++  R  +G
Sbjct: 75  AARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHRRDARG 133

Query: 65  ECTPLMEAASSG 76
             TPL  A   G
Sbjct: 134 L-TPLELALQRG 144

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 44.3 bits (106), Expect = 2e-05
 Identities = 17/70 (24%), Positives = 27/70 (38%), Gaps = 1/70 (1%)

Query: 7   SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGEC 66
             G      +LL +G S +     G S +  A   G+ +  +VL+   A+V      G  
Sbjct: 44  MFGSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTG-A 102

Query: 67  TPLMEAASSG 76
            P+  A   G
Sbjct: 103 LPIHLAVQEG 112

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B Length = 156

 Score = 43.2 bits (103), Expect = 4e-05
 Identities = 37/174 (21%), Positives = 62/174 (35%), Gaps = 31/174 (17%)

Query: 5   ACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK 63
           A + GDV+ V++LL  E          G++ L +    G   +A  LL   A+   +   
Sbjct: 9   AAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTS 67

Query: 64  GECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQN 123
           G  +P+ +AA +GF             + L+ L       ++  A       + N     
Sbjct: 68  G-TSPVHDAARTGF------------LDTLKVL-------VEHGA-------DVNVPDGT 100

Query: 124 ERS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 176
               +  A  +G    V   L     +H     G + L LA   G  +L  +L 
Sbjct: 101 GALPIHLAVQEGHTAVV-SFLAAESDLHRRDARGLTPLELALQRGAQDLVDILQ 153

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  158 bits (402), Expect = 2e-45
 Identities = 48/152 (31%), Positives = 79/152 (51%), Gaps = 2/152 (1%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
              L+EAA +G  + VR+L+ +GA        G +PL  A   GH +   VLL  G + +
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
              +   TPL  AAS GH  + ++LL++GA +N   +  K +AL  A    H ++V  L+
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNA-KDMLKMTALHWATEHNHQEVVELLI 120

Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLL 342
             GAD   ++    TA   +  +G+ ++A++L
Sbjct: 121 KYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  139 bits (353), Expect = 1e-38
 Identities = 49/179 (27%), Positives = 75/179 (41%), Gaps = 37/179 (20%)

Query: 500 ETALTLACCGGFLDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVH 556
              L  A   G  D    L+ NGA      LG ++PL  AAQ GH      LL +G    
Sbjct: 3   GKKLLEAARAGQDDEVRILMANGAPFTTDWLG-TSPLHLAAQYGHFSTTEVLLRAGVSRD 61

Query: 557 AKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSV 616
           A+T+   T L  A   GH ++ ++LL +GA+                            V
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGAD----------------------------V 93

Query: 617 HAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLL 670
           +AK     TAL +A E+ H +V +LL+ YGA++        T    +   G+ ++ ++L
Sbjct: 94  NAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  139 bits (352), Expect = 1e-38
 Identities = 43/151 (28%), Positives = 72/151 (47%), Gaps = 5/151 (3%)

Query: 160 LSLACSAGYYELAQVLLAMHANVE-DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNG 218
           L  A  AG  +  ++L+A  A    D       +PL  AA  G      +L+  G   + 
Sbjct: 6   LLEAARAGQDDEVRILMANGAPFTTD---WLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 219 QSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278
           ++    TPL  A + GH  +V VLL+ GA+V   +    T L  A    H  V ++L++Y
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKY 122

Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFL 309
           GA ++T  ++F ++A  ++   G+ D+   L
Sbjct: 123 GADVHT-QSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  123 bits (311), Expect = 6e-33
 Identities = 48/149 (32%), Positives = 72/149 (48%), Gaps = 2/149 (1%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L++A   G    V+ L+  G     T   G S L LA   G++   +VLL    + + R 
Sbjct: 6   LLEAARAGQDDEVRILMANGAPF-TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART 64

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
                TPL  AAS G   IV +L+ HGADVN +     T L +A    H+ VV +L++ G
Sbjct: 65  KVDR-TPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKIL 275
           A+V   ++   T    +   G+  +A+IL
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  122 bits (308), Expect = 1e-32
 Identities = 44/204 (21%), Positives = 69/204 (33%), Gaps = 82/204 (40%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
             L+EAA+ G  + VR L+ +GA        G + L  A + GH    ++LL  G +   
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPF-TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVS--- 59

Query: 591 STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
                                      A+T+   T L  A   GH ++ ++LL +GA+  
Sbjct: 60  -------------------------RDARTKVDRTPLHMAASEGHANIVEVLLKHGAD-- 92

Query: 651 NSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGD 710
                                                              V+AK     
Sbjct: 93  ---------------------------------------------------VNAKDMLKM 101

Query: 711 TALTYACENGHTDVADLLLSYGAN 734
           TAL +A E+ H +V +LL+ YGA+
Sbjct: 102 TALHWATEHNHQEVVELLIKYGAD 125

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  121 bits (307), Expect = 2e-32
 Identities = 44/176 (25%), Positives = 74/176 (42%), Gaps = 34/176 (19%)

Query: 562 GDTALTYACENGHTDVADLLLSYGANL----DNSTMLIEAAKGGHANVVQLLLDFPRSVH 617
               L  A   G  D   +L++ GA        ++ L  AA+ GH +  ++LL    S  
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRD 61

Query: 618 AKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLD 672
           A+T+   T L  A   GH ++ ++LL +GA++        T L  A +  H  VV+LL+ 
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI- 120

Query: 673 FPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLL 728
                                   G    VH +++   TA   + +NG+ D+A++L
Sbjct: 121 ----------------------KYGAD--VHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  121 bits (307), Expect = 2e-32
 Identities = 46/158 (29%), Positives = 69/158 (43%), Gaps = 33/158 (20%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLEL 544
           GA      +    + L LA   G     + LL+ G + +       TPL  AA EGH  +
Sbjct: 25  GAPFTT--DWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANI 82

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHAN 604
           V  LL  GA V+AK     TAL +A E+ H +V +LL+ YGA+                 
Sbjct: 83  VEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGAD----------------- 125

Query: 605 VVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
                      VH +++   TA   + +NG+ D+A++L
Sbjct: 126 -----------VHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score =  104 bits (263), Expect = 2e-26
 Identities = 45/172 (26%), Positives = 71/172 (41%), Gaps = 20/172 (11%)

Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
           +    L+EAA AG     +IL+  GA   T  +    S L LA   GH      LL AG 
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTT--DWLGTSPLHLAAQYGHFSTTEVLLRAGV 58

Query: 315 DQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTY 374
            ++ +T    T L  A+ +GH  + ++LL  GA             N K      +  T 
Sbjct: 59  SRDARTKVDRTPLHMAASEGHANIVEVLLKHGAD-----------VNAK----DMLKMT- 102

Query: 375 SRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVL 426
             +L  A      + V+ L+  G  VH  +   ++   ++   G  +LA++L
Sbjct: 103 --ALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 80.9 bits (201), Expect = 4e-18
 Identities = 47/205 (22%), Positives = 71/205 (34%), Gaps = 59/205 (28%)

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 437
           L++A   G    V+ L+  G     T   G S L LA   G++   +VLL    + + R 
Sbjct: 6   LLEAARAGQDDEVRILMANGAPF-TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART 64

Query: 438 IKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILI-PGAKINAHTE 496
                TPL  AAS G                               +L+  GA +NA   
Sbjct: 65  KVDR-TPLHMAASEGH-------------------------ANIVEVLLKHGADVNAKD- 97

Query: 497 ETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVH 556
                                             T L  A +  H E+V  L+  GA VH
Sbjct: 98  -----------------------MLK-------MTALHWATEHNHQEVVELLIKYGADVH 127

Query: 557 AKTQTGDTALTYACENGHTDVADLL 581
            +++   TA   + +NG+ D+A++L
Sbjct: 128 TQSKFCKTAFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 70.5 bits (174), Expect = 2e-14
 Identities = 42/257 (16%), Positives = 64/257 (24%), Gaps = 110/257 (42%)

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA 352
            L  A   G  D VR L++ GA          + L  A+  GH    ++LL +G      
Sbjct: 5   KLLEAARAGQDDEVRILMANGAP-FTTDWLGTSPLHLAAQYGHFSTTEVLLRAGV----- 58

Query: 353 YARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS 412
                                                         S    T    + L 
Sbjct: 59  ----------------------------------------------SRDARTKVDRTPLH 72

Query: 413 LACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPN 472
           +A S G+  + +VLL   A+V  + +    T L  A     Q    E V           
Sbjct: 73  MAASEGHANIVEVLLKHGADVNAKDMLKM-TALHWATEHNHQ----EVVE---------- 117

Query: 473 DKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAST 531
                      +LI  GA ++  +                        K          T
Sbjct: 118 -----------LLIKYGADVHTQS------------------------KFC-------KT 135

Query: 532 PLMEAAQEGHLELVRYL 548
               +   G+ +L   L
Sbjct: 136 AFDISIDNGNEDLAEIL 152

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 53.5 bits (130), Expect = 1e-08
 Identities = 15/112 (13%), Positives = 23/112 (20%), Gaps = 54/112 (48%)

Query: 623 GDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSL 682
               L  A   G  D   +L++ G                 A                  
Sbjct: 2   LGKKLLEAARAGQDDEVRILMANG-----------------APF---------------- 28

Query: 683 SSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                                     G + L  A + GH    ++LL  G +
Sbjct: 29  ---------------------TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVS 59

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 44.3 bits (106), Expect = 2e-05
 Identities = 20/72 (27%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A   G   T + LL  G S    T    + L +A S G+  + +VLL   A+V  + +  
Sbjct: 41  AAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLK 100

Query: 65  ECTPLMEAASSG 76
             T L  A    
Sbjct: 101 M-TALHWATEHN 111

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1 Length = 153

 Score = 39.7 bits (94), Expect = 8e-04
 Identities = 41/175 (23%), Positives = 66/175 (37%), Gaps = 29/175 (16%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           L++A   G    V+ L+  G     T   G S L LA   G++   +VLL    + + R 
Sbjct: 6   LLEAARAGQDDEVRILMANGAPF-TTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDART 64

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
                TPL  AAS G   +          EVL          L   A       + N + 
Sbjct: 65  KVDR-TPLHMAASEGHANIV---------EVL----------LKHGA-------DVNAKD 97

Query: 122 QNER-SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVL 175
             +  +L  A      + V+ L+  G  VH  +   ++   ++   G  +LA++L
Sbjct: 98  MLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  156 bits (396), Expect = 2e-44
 Identities = 51/169 (30%), Positives = 80/169 (47%), Gaps = 7/169 (4%)

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLI-NHGADVNGQSSSGNTPLMYACAGGHEAV 238
           A             L+EAA +G +E V+ L      +        +TPL +A      +V
Sbjct: 2   AMGNSEA----DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV 57

Query: 239 VRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLAC 298
           V  LL+ GA+V   ++ G  PL  A S GH  VA++L+++GA +N  ++ +K + L  A 
Sbjct: 58  VEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNV-ADLWKFTPLHEAA 116

Query: 299 YKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
            KG  ++ + LL  GAD   K  + +T L     DG  ++  LL    A
Sbjct: 117 AKGKYEICKLLLQHGADPTKKNRDGNTPLDLVK-DGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  147 bits (373), Expect = 3e-41
 Identities = 52/162 (32%), Positives = 73/162 (45%), Gaps = 4/162 (2%)

Query: 154 DEGESLLSLACSAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
            E +  L  A  AG  E  + L  +   N  D   +   TPL  AA    + +V  L+ H
Sbjct: 6   SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQS-TPLHFAAGYNRVSVVEYLLQH 64

Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           GADV+ +   G  PL  AC+ GH  V  +L++ GA V   +    TPL EAA+ G   + 
Sbjct: 65  GADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEIC 124

Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
           K+LL++GA      N    + L L    G  D+   L    A
Sbjct: 125 KLLLQHGADPTK-KNRDGNTPLDLVKD-GDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  140 bits (356), Expect = 7e-39
 Identities = 56/169 (33%), Positives = 75/169 (44%), Gaps = 14/169 (8%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLL-KNGANIELG---ASTPLMEAAQEGHLE 543
           GA  N+  +      L  A   G ++    L      N        STPL  AA    + 
Sbjct: 1   GAMGNSEAD----RQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVS 56

Query: 544 LVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAA 598
           +V YLL  GA VHAK + G   L  AC  GH +VA+LL+ +GA +        T L EAA
Sbjct: 57  VVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAA 116

Query: 599 KGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA 647
             G   + +LLL        K + G+T L    ++G TD+ DLL    A
Sbjct: 117 AKGKYEICKLLLQHGADPTKKNRDGNTPLDLV-KDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  139 bits (353), Expect = 1e-38
 Identities = 56/218 (25%), Positives = 77/218 (35%), Gaps = 60/218 (27%)

Query: 522 GANIELGASTPLMEAAQEGHLELVRYLLDS-GAQVHAKTQTGDTALTYACENGHTDVADL 580
           GA     A   L+EAA+ G +E V+ L                T L +A       V + 
Sbjct: 1   GAMGNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEY 60

Query: 581 LLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVAD 640
           LL +GA+                            VHAK + G   L  AC  GH +VA+
Sbjct: 61  LLQHGAD----------------------------VHAKDKGGLVPLHNACSYGHYEVAE 92

Query: 641 LLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCS 695
           LL+ +GA +        T L EAA  G   + +LLL                        
Sbjct: 93  LLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLL-----------------------Q 129

Query: 696 QGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGA 733
            G       K + G+T L    ++G TD+ DLL    A
Sbjct: 130 HGAD--PTKKNRDGNTPLDLV-KDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  131 bits (333), Expect = 1e-35
 Identities = 42/136 (30%), Positives = 57/136 (41%), Gaps = 5/136 (3%)

Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC-GANVEDHNENGHTPLMEAASAGHVGV 271
           GA  N   S  +  L+ A   G    V+ L      N  D      TPL  AA    V V
Sbjct: 1   GAMGN---SEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSV 57

Query: 272 AKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEAS 331
            + LL++GA ++   ++     L  AC  GH ++   L+  GA          T L EA+
Sbjct: 58  VEYLLQHGADVHA-KDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAA 116

Query: 332 MDGHVEVAKLLLDSGA 347
             G  E+ KLLL  GA
Sbjct: 117 AKGKYEICKLLLQHGA 132

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score =  125 bits (318), Expect = 9e-34
 Identities = 48/152 (31%), Positives = 67/152 (44%), Gaps = 3/152 (1%)

Query: 130 ACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK 188
           A   GDV+TVKKL T    +  +      + L  A       + + LL   A+V  +   
Sbjct: 15  AAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG 74

Query: 189 GECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN 248
           G   PL  A S G  E+  LL+ HGA VN       TPL  A A G   + ++LL+ GA+
Sbjct: 75  G-LVPLHNACSYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGAD 133

Query: 249 VEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280
               N +G+TPL      G   +  +L    A
Sbjct: 134 PTKKNRDGNTPLD-LVKDGDTDIQDLLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 96.7 bits (242), Expect = 1e-23
 Identities = 46/205 (22%), Positives = 63/205 (30%), Gaps = 57/205 (27%)

Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHS-NEFKESALTLACYKGHLD 304
           GA     N      L+EAA AG V   K L      +N       + + L  A     + 
Sbjct: 1   GAMG---NSEADRQLLEAAKAGDVETVKKLCTVQ-SVNCRDIEGRQSTPLHFAAGYNRVS 56

Query: 305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKC 364
           +V +LL  GAD   K       L  A   GH EVA+LL+  GA                 
Sbjct: 57  VVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGA----------------- 99

Query: 365 ERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQ 424
                                              V+       + L  A + G YE+ +
Sbjct: 100 ----------------------------------VVNVADLWKFTPLHEAAAKGKYEICK 125

Query: 425 VLLAMHANVEDRGIKGECTPLMEAA 449
           +LL   A+   +   G  TPL    
Sbjct: 126 LLLQHGADPTKKNRDGN-TPLDLVK 149

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 86.7 bits (216), Expect = 5e-20
 Identities = 32/183 (17%), Positives = 48/183 (26%), Gaps = 83/183 (45%)

Query: 552 GAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLD 611
           GA  +++    D  L  A + G  +    L +  +                 N       
Sbjct: 1   GAMGNSE---ADRQLLEAAKAGDVETVKKLCTVQS----------------VNC------ 35

Query: 612 FPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLL 671
                        T L +A       V + LL +GA+                       
Sbjct: 36  -----RDIEGRQSTPLHFAAGYNRVSVVEYLLQHGAD----------------------- 67

Query: 672 DFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSY 731
                                         VHAK + G   L  AC  GH +VA+LL+ +
Sbjct: 68  ------------------------------VHAKDKGGLVPLHNACSYGHYEVAELLVKH 97

Query: 732 GAN 734
           GA 
Sbjct: 98  GAV 100

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 79.4 bits (197), Expect = 2e-17
 Identities = 50/247 (20%), Positives = 73/247 (29%), Gaps = 85/247 (34%)

Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFLLSA-GADQEHKTDEMHTALMEASMDGHVE 337
           GA  N+ +    +  L  A   G ++ V+ L +    +         T L  A+    V 
Sbjct: 1   GAMGNSEA----DRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVS 56

Query: 338 VAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEG 397
           V + LL  GA                                                  
Sbjct: 57  VVEYLLQHGA-------------------------------------------------- 66

Query: 398 RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNL 457
             VH     G   L  ACS G+YE+A++L+   A V    +    TPL EAA+ G+    
Sbjct: 67  -DVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWKF-TPLHEAAAKGKY--- 121

Query: 458 NESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVAD 516
            E                        +L+  GA       +   T L L    G  D+ D
Sbjct: 122 -EICK---------------------LLLQHGADPTKKNRD-GNTPLDLVKD-GDTDIQD 157

Query: 517 FLLKNGA 523
            L  + A
Sbjct: 158 LLRGDAA 164

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 47.4 bits (114), Expect = 2e-06
 Identities = 27/72 (37%), Positives = 35/72 (48%), Gaps = 1/72 (1%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A     V  V+ LL  G  VH     G   L  ACS G+YE+A++L+   A V    +  
Sbjct: 49  AAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNACSYGHYEVAELLVKHGAVVNVADLWK 108

Query: 65  ECTPLMEAASSG 76
             TPL EAA+ G
Sbjct: 109 F-TPLHEAAAKG 119

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S* Length = 165

 Score = 40.1 bits (95), Expect = 6e-04
 Identities = 22/73 (30%), Positives = 30/73 (41%), Gaps = 2/73 (2%)

Query: 5  ACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK 63
          A   GDV+TVKKL T    +  +      + L  A       + + LL   A+V  +   
Sbjct: 15 AAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG 74

Query: 64 GECTPLMEAASSG 76
          G   PL  A S G
Sbjct: 75 G-LVPLHNACSYG 86

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  157 bits (398), Expect = 7e-44
 Identities = 39/179 (21%), Positives = 69/179 (38%), Gaps = 5/179 (2%)

Query: 173 QVLLAMHANVE--DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYA 230
           + +L    +     R        L++AA +G +E+V+  +    D +  +  G T L  A
Sbjct: 2   RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNA 61

Query: 231 CAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFK 290
             G + ++V  L+  GANV   + +G TPL  AAS     +   L+++GA I   +    
Sbjct: 62  ICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDG 121

Query: 291 ESALTLA--CYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
            +A        +G+ D   +L                AL + S +   E+         
Sbjct: 122 ATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDEL-SFREGESV 179

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  150 bits (380), Expect = 2e-41
 Identities = 42/206 (20%), Positives = 66/206 (32%), Gaps = 9/206 (4%)

Query: 139 VKKLLTEGRSVHETTDE---GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM 195
           ++ +L +  S  +          LL  A   G  E+ Q  +    +      +G  T L 
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGI-TALH 59

Query: 196 EAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNEN 255
            A       IV  LI  GA+VN   S G TPL  A +     +   L++ GA +     +
Sbjct: 60  NAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLS 119

Query: 256 -GHTPLMEAASA--GHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA 312
            G T   +      G+   A  L +    +    N     AL         D + F    
Sbjct: 120 DGATAFEKCDPYREGYADCATYLADVEQSMG-LMNSGAVYALWDYS-AEFGDELSFREGE 177

Query: 313 GADQEHKTDEMHTALMEASMDGHVEV 338
                 +     T    A++ G    
Sbjct: 178 SVTVLRRDGPEETDWWWAALHGQEGY 203

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  140 bits (356), Expect = 4e-38
 Identities = 40/242 (16%), Positives = 74/242 (30%), Gaps = 46/242 (19%)

Query: 517 FLLKNGANIE------LGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYAC 570
            +L+   +        L     L++AA  G LE+V+  +          + G TAL  A 
Sbjct: 3   SVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAI 62

Query: 571 ENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQT-GD 624
              +  + D L++ GAN+        T L  AA      +   L+    ++ A T + G 
Sbjct: 63  CGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGA 122

Query: 625 TALTYA--CENGHTDVADLLLSYGANLDN-----STMLIEAAKGGHANVVQLLLDFPRSV 677
           TA         G+ D A  L     ++          L + +      +           
Sbjct: 123 TAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDEL----------- 171

Query: 678 IGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTD-VADLLLSYGANLR 736
                             +G+   V  +    +T   +A  +G    V          ++
Sbjct: 172 ---------------SFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRVK 216

Query: 737 NR 738
            +
Sbjct: 217 PQ 218

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  137 bits (347), Expect = 5e-37
 Identities = 39/208 (18%), Positives = 64/208 (30%), Gaps = 21/208 (10%)

Query: 488 GAKINA--HTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHL 542
                            L  A   G L+V    +K   +         T L  A    + 
Sbjct: 8   AGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANY 67

Query: 543 ELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL------DNSTMLIE 596
            +V +L+ +GA V++    G T L  A     T +   L+ +GA +      D +T   +
Sbjct: 68  SIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEK 127

Query: 597 AA--KGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL----- 649
               + G+A+    L D  +S+         AL         +++         +     
Sbjct: 128 CDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDELS-FREGESVTVLRRDG 186

Query: 650 DNSTMLIEAAKGGHANVVQ--LLLDFPR 675
              T    AA  G    V       FPR
Sbjct: 187 PEETDWWWAALHGQEGYVPRNYFGLFPR 214

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  123 bits (312), Expect = 3e-32
 Identities = 38/176 (21%), Positives = 58/176 (32%), Gaps = 14/176 (7%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLEL 544
               +   EE   TAL  A CG    + DFL+  GAN+    S   TPL  AA      +
Sbjct: 44  MNDPSQPNEE-GITALHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVI 102

Query: 545 VRYLLDSGAQVHAKTQT-GDTALTYA--CENGHTDVADLLLSYGANLDN-----STMLIE 596
              L+  GA + A T + G TA         G+ D A  L     ++          L +
Sbjct: 103 CMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWD 162

Query: 597 AAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTD-VADLLLSYGANLDN 651
            +       +        +V  +    +T   +A  +G    V          +  
Sbjct: 163 YSAEFGD-ELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRVKP 217

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score =  108 bits (271), Expect = 9e-27
 Identities = 27/168 (16%), Positives = 49/168 (29%), Gaps = 4/168 (2%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L  A    +   V  L+T G +V+     G + L  A S     +   L+   A +    
Sbjct: 58  LHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117

Query: 187 IKGECTPLMEAASS--GFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
           +    T   +      G+ +    L +    +   +S     L    A   +  +     
Sbjct: 118 LSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGD-ELSFREG 176

Query: 245 CGANVEDHNENGHTPLMEAASAGHVG-VAKILLEYGAGINTHSNEFKE 291
               V   +    T    AA  G  G V +        +    ++ K 
Sbjct: 177 ESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRVKPQRSKVKH 224

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 98.5 bits (246), Expect = 2e-23
 Identities = 43/220 (19%), Positives = 70/220 (31%), Gaps = 34/220 (15%)

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 437
           L+ A   G+++ V++ + E     +  +EG + L  A     Y +   L+   ANV    
Sbjct: 25  LLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVNSPD 84

Query: 438 IKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTE 496
             G  TPL  AAS                                + L+  GA I A T 
Sbjct: 85  SHG-WTPLHCAASCND-------------------------TVICMALVQHGAAIFATTL 118

Query: 497 ETQETALTLA--CCGGFLDVADFLLKNGANIELG---ASTPLMEAAQEGHLELVRYLLDS 551
               TA         G+ D A +L     ++ L    A   L + + E   E + +    
Sbjct: 119 SDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFGDE-LSFREGE 177

Query: 552 GAQVHAKTQTGDTALTYACENGHTD-VADLLLSYGANLDN 590
              V  +    +T   +A  +G    V          +  
Sbjct: 178 SVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRVKP 217

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 85.0 bits (211), Expect = 8e-19
 Identities = 40/255 (15%), Positives = 69/255 (27%), Gaps = 37/255 (14%)

Query: 14  VKKLLTEGRSVHETTDE---GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM 70
           ++ +L +  S  +          LL  A   G  E+ Q  +    +      +G  T L 
Sbjct: 1   MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGI-TALH 59

Query: 71  EAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERS-LVQ 129
            A                   ++  L       +   A       N N    +  + L  
Sbjct: 60  NAICGAN------------YSIVDFL-------ITAGA-------NVNSPDSHGWTPLHC 93

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTD-EGESLLSLACSA--GYYELAQVLLAMHANVEDRG 186
           A S  D      L+  G ++  TT  +G +          GY + A  L  +  ++    
Sbjct: 94  AASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMN 153

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV-RVLLEC 245
                  L    S+ F + +         V  +     T   +A   G E  V R     
Sbjct: 154 SGAV-YALW-DYSAEFGDELSFREGESVTVLRRDGPEETDWWWAALHGQEGYVPRNYFGL 211

Query: 246 GANVEDHNENGHTPL 260
              V+          
Sbjct: 212 FPRVKPQRSKVKHHH 226

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens} Length = 229

 Score = 44.9 bits (107), Expect = 3e-05
 Identities = 15/79 (18%), Positives = 25/79 (31%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           L  A    +   V  L+T G +V+     G + L  A S     +   L+   A +    
Sbjct: 58  LHNAICGANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATT 117

Query: 62  IKGECTPLMEAASSGFGKL 80
           +    T   +      G  
Sbjct: 118 LSDGATAFEKCDPYREGYA 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  153 bits (389), Expect = 7e-44
 Identities = 36/135 (26%), Positives = 53/135 (39%), Gaps = 1/135 (0%)

Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
              ++    S +  L  A A G    VR LLE GA+    N  G  P+      G   VA
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVA 60

Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASM 332
           ++LL +GA  N          +  A  +G LD +  L  AGA  +         +  A  
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE 120

Query: 333 DGHVEVAKLLLDSGA 347
            GH ++A+ L  +  
Sbjct: 121 QGHRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  149 bits (378), Expect = 2e-42
 Identities = 38/137 (27%), Positives = 60/137 (43%), Gaps = 4/137 (2%)

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239
             +   G   +   L  AA+ G +E VR L+  GAD N  +  G  P+      G   V 
Sbjct: 3   PGIHMLGGSSD-AGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVM-MMGSAQVA 60

Query: 240 RVLLECGANVEDHNENGHT-PLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLAC 298
            +LL  GA     +    T P+ +AA  G +    +L   GA ++   + +    + LA 
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VCDAWGRLPVDLAE 119

Query: 299 YKGHLDMVRFLLSAGAD 315
            +GH D+ R+L +A  D
Sbjct: 120 EQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  136 bits (345), Expect = 9e-38
 Identities = 35/136 (25%), Positives = 55/136 (40%), Gaps = 10/136 (7%)

Query: 522 GANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVA 578
              I +        L  AA  G +E VR LL++GA  +A  + G   +      G   VA
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMM-MGSAQVA 60

Query: 579 DLLLSYGANL-----DNSTM-LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACE 632
           +LLL +GA          T  + +AA+ G  + + +L      +      G   +  A E
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEE 120

Query: 633 NGHTDVADLLLSYGAN 648
            GH D+A  L +   +
Sbjct: 121 QGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  132 bits (334), Expect = 2e-36
 Identities = 32/133 (24%), Positives = 53/133 (39%), Gaps = 3/133 (2%)

Query: 149 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRL 208
           +H      ++ L+ A + G  E  + LL   A+       G   P+      G  ++  L
Sbjct: 5   IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFG-RRPIQ-VMMMGSAQVAEL 62

Query: 209 LINHGADVNGQSSSGNT-PLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG 267
           L+ HGA+ N    +  T P+  A   G    + VL   GA ++  +  G  P+  A   G
Sbjct: 63  LLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQG 122

Query: 268 HVGVAKILLEYGA 280
           H  +A+ L     
Sbjct: 123 HRDIARYLHAATG 135

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  112 bits (282), Expect = 3e-29
 Identities = 30/122 (24%), Positives = 53/122 (43%), Gaps = 1/122 (0%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L  A + G V+TV++LL  G   +     G   + +    G  ++A++LL   A      
Sbjct: 16  LATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCAD 74

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
                 P+ +AA  GF++ + +L   GA ++   + G  P+  A   GH  + R L    
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAAT 134

Query: 247 AN 248
            +
Sbjct: 135 GD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score =  110 bits (279), Expect = 8e-29
 Identities = 34/162 (20%), Positives = 59/162 (36%), Gaps = 33/162 (20%)

Query: 431 ANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GA 489
             +   G   +   L  AA+ G+                         ++    L+  GA
Sbjct: 3   PGIHMLGGSSD-AGLATAAARGQ-------------------------VETVRQLLEAGA 36

Query: 490 KINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL----GASTPLMEAAQEGHLELV 545
             NA     +   + +   G    VA+ LL +GA          + P+ +AA+EG L+ +
Sbjct: 37  DPNALNRFGR-RPIQVMMMGS-AQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTL 94

Query: 546 RYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
             L  +GA++      G   +  A E GH D+A  L +   +
Sbjct: 95  VVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 87.1 bits (217), Expect = 2e-20
 Identities = 27/185 (14%), Positives = 39/185 (21%), Gaps = 83/185 (44%)

Query: 552 GAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLD 611
              +H    + D  L  A   G  +    LL  GA+                        
Sbjct: 2   SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD------------------------ 37

Query: 612 FPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLL 671
                +A  + G   +      G   VA+LLL +GA                        
Sbjct: 38  ----PNALNRFGRRPIQVMM-MGSAQVAELLLLHGAE----------------------- 69

Query: 672 DFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDT-ALTYACENGHTDVADLLLS 730
                                          +       T  +  A   G  D   +L  
Sbjct: 70  ------------------------------PNCADPATLTRPVHDAAREGFLDTLVVLHR 99

Query: 731 YGANL 735
            GA L
Sbjct: 100 AGARL 104

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 68.2 bits (168), Expect = 6e-14
 Identities = 30/214 (14%), Positives = 52/214 (24%), Gaps = 79/214 (36%)

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSIS 371
                          L  A+  G VE  + LL++GA                        
Sbjct: 1   GSPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGAD----------------------- 37

Query: 372 YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 431
                                        +     G   + +    G  ++A++LL   A
Sbjct: 38  ----------------------------PNALNRFGRRPIQVMMM-GSAQVAELLLLHGA 68

Query: 432 NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAK 490
                       P+ +AA  G                          L   V+L   GA+
Sbjct: 69  EPNCADPATLTRPVHDAAREGF-------------------------LDTLVVLHRAGAR 103

Query: 491 INAHTEETQETALTLACCGGFLDVADFLLKNGAN 524
           ++      +   + LA   G  D+A +L     +
Sbjct: 104 LDVCDAWGR-LPVDLAEEQGHRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 54.0 bits (131), Expect = 6e-09
 Identities = 29/194 (14%), Positives = 46/194 (23%), Gaps = 64/194 (32%)

Query: 24  VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATG 83
           +H      ++ L+ A + G  E  + LL   A+       G   P+        G     
Sbjct: 5   IHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFG-RRPIQVMM---MGSA--- 57

Query: 84  DGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERS--LVQACSDGDVKTVKK 141
                  +V   L       L   A         N       +  +  A  +G + T+  
Sbjct: 58  -------QVAELL-------LLHGA-------EPNCADPATLTRPVHDAAREGFLDTLVV 96

Query: 142 LLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 201
           L   G  +      G                                    P+  A   G
Sbjct: 97  LHRAGARLDVCDAWG----------------------------------RLPVDLAEEQG 122

Query: 202 FIEIVRLLINHGAD 215
             +I R L     D
Sbjct: 123 HRDIARYLHAATGD 136

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 47.1 bits (113), Expect = 1e-06
 Identities = 19/75 (25%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 2  LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
          L  A + G V+TV++LL  G   +     G   + +    G  ++A++LL   A      
Sbjct: 16 LATAAARGQVETVRQLLEAGADPNALNRFGRRPIQVMMM-GSAQVAELLLLHGAEPNCAD 74

Query: 62 IKGECTPLMEAASSG 76
                P+ +AA  G
Sbjct: 75 PATLTRPVHDAAREG 89

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1 Length = 136

 Score = 40.9 bits (97), Expect = 2e-04
 Identities = 14/74 (18%), Positives = 24/74 (32%), Gaps = 2/74 (2%)

Query: 4   QACSDGDVKTVKKLLTEGRSVHETTDEGESL-LSLACSAGYYELAQVLLAMHANVEDRGI 62
           Q    G  +  + LL  G   +       +  +  A   G+ +   VL    A ++    
Sbjct: 50  QVMMMGSAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVCDA 109

Query: 63  KGECTPLMEAASSG 76
            G   P+  A   G
Sbjct: 110 WG-RLPVDLAEEQG 122

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  160 bits (406), Expect = 2e-43
 Identities = 59/426 (13%), Positives = 99/426 (23%), Gaps = 107/426 (25%)

Query: 139 VKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA 198
           +   L   +++ +       LL L  +       Q+     ++   +GIK E      AA
Sbjct: 50  IHIFLPGTKNMEQVR----QLLCLYYAHYNRNAKQLW----SDAHKKGIKSE-VICFVAA 100

Query: 199 SSG---FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE--DHN 253
            +G    ++ + LL+     V    +        A   GH  V+  L E           
Sbjct: 101 ITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQ 160

Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
              +                                      LA   GHL ++  L    
Sbjct: 161 AENYHAFR----------------------------------LAAENGHLHVLNRLCELA 186

Query: 314 ADQEHKTDEMH--TALMEASMD-GHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSI 370
             +     +     A   A++  GH  V   LLD       A                  
Sbjct: 187 PTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYA------------------ 228

Query: 371 SYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 430
                   +     G+      +      + E  D       L+   G ++L        
Sbjct: 229 -------EIHEFEYGEKYVNPFIARHVNRLKEMHDA----FKLSNPDGVFDL-------- 269

Query: 431 ANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAK 490
             V           L        +  L                  +  L +   +   A 
Sbjct: 270 --VTKSECLQGFYMLRNLIRRNDEVLL----------------DDIRFLLSIPGIKALAP 311

Query: 491 INAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLD 550
                       L LA   G       LL   + + L  +         G L+L    L+
Sbjct: 312 TAT-IPGDANELLRLALRLGNQGACALLLSIPSVLALTKANNYYINETGGRLDLRAVALE 370

Query: 551 SGAQVH 556
                H
Sbjct: 371 HHHHHH 376

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  151 bits (382), Expect = 3e-40
 Identities = 52/355 (14%), Positives = 97/355 (27%), Gaps = 68/355 (19%)

Query: 390 VKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA 449
           +   L   +++ +       LL L  +       Q+     ++   +GIK E      AA
Sbjct: 50  IHIFLPGTKNMEQVR----QLLCLYYAHYNRNAKQLW----SDAHKKGIKSE-VICFVAA 100

Query: 450 SSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILI-PGAKINAHTEETQETALTLACC 508
            +G                        + L    +L+     +     E    A  LA  
Sbjct: 101 ITG----------------------CSSALDTLCLLLTSDEIVKVIQAE-NYQAFRLAAE 137

Query: 509 GGFLDVADFLLKNGANIELGA-----STPLMEAAQEGHLELVRYLLDSGAQVHAKTQT-- 561
            G L V + L +      +             AA+ GHL ++  L +             
Sbjct: 138 NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAE 197

Query: 562 GDTALTYAC-ENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKT 620
              A  +A    GH +V + LL     L  + +     + G   V   +         + 
Sbjct: 198 NYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIH--EFEYGEKYVNPFIAR----HVNRL 251

Query: 621 QTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGG 680
           +    A   +  +G  D+    ++    L    ML    +     ++  +          
Sbjct: 252 KEMHDAFKLSNPDGVFDL----VTKSECLQGFYMLRNLIRRNDEVLLDDIR--------- 298

Query: 681 SLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
                       +      +         +  L  A   G+     LLLS  + L
Sbjct: 299 --------FLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPSVL 345

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  130 bits (329), Expect = 3e-33
 Identities = 54/387 (13%), Positives = 103/387 (26%), Gaps = 70/387 (18%)

Query: 234 GHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESA 293
            ++  + + L    N+E   +     L+    A +   AK L          S      A
Sbjct: 45  SYKEAIHIFLPGTKNMEQVRQ-----LLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVA 99

Query: 294 LTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAY 353
               C    LD +  LL++    +    E + A   A+ +GH+ V   L +     + A 
Sbjct: 100 AITGC-SSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM 158

Query: 354 ARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSL 413
            + +                                                       L
Sbjct: 159 IQAE-------------------------------------------------NYHAFRL 169

Query: 414 ACSAGYYELAQVLLAMHANVE--DRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFP 471
           A   G+  +   L  +           +        A   G    +N  +       +  
Sbjct: 170 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAE 229

Query: 472 NDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAST 531
             +   G +     I     + +  +    A  L+   G  D+     K+          
Sbjct: 230 IHEFEYGEKYVNPFI---ARHVNRLKEMHDAFKLSNPDGVFDLVT---KSECLQGFYMLR 283

Query: 532 PLMEAAQEGHLELVRYL-----LDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA 586
            L+    E  L+ +R+L     + + A         +  L  A   G+     LLLS  +
Sbjct: 284 NLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIPS 343

Query: 587 --NLDNSTMLIEAAKGGHANVVQLLLD 611
              L  +        GG  ++  + L+
Sbjct: 344 VLALTKANNYYINETGGRLDLRAVALE 370

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  130 bits (327), Expect = 7e-33
 Identities = 50/400 (12%), Positives = 101/400 (25%), Gaps = 74/400 (18%)

Query: 287 NEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMD-GHVEVAKLLLDS 345
             F  +         + + +   L    + E         L  A  +    ++       
Sbjct: 31  QHFISANELSLMTLSYKEAIHIFLPGTKNMEQVR--QLLCLYYAHYNRNAKQLWSDAHKK 88

Query: 346 GAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTD 405
           G +S                           + +  CS   + T+  LLT    V     
Sbjct: 89  GIKS---------------------EVICFVAAITGCSSA-LDTLCLLLTSDEIVKVIQA 126

Query: 406 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGE-CTPLMEAASSGRQCNLNESVSAY 464
           E      LA   G+  +   L  +        I+ E       AA +G        ++  
Sbjct: 127 ENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHL----HVLN-- 180

Query: 465 ARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQ-ETALTLACCG-GFLDVADFLLKNG 522
                              +            + +   A   A  G G  +V +FLL   
Sbjct: 181 ------------------RLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCP 222

Query: 523 ANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLL 582
             +        +   + G   +  ++     ++         A   +  +G  D+    +
Sbjct: 223 VMLA----YAEIHEFEYGEKYVNPFIARHVNRLKE----MHDAFKLSNPDGVFDL----V 270

Query: 583 SYGANLDNSTMLIEAAKGGHANVVQLL--------LDFPRSVHAKTQTGDTALTYACENG 634
           +    L    ML    +     ++  +        +             +  L  A   G
Sbjct: 271 TKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLG 330

Query: 635 HTDVADLLLSYGA--NLDNSTMLIEAAKGGHANVVQLLLD 672
           +     LLLS  +   L  +        GG  ++  + L+
Sbjct: 331 NQGACALLLSIPSVLALTKANNYYINETGGRLDLRAVALE 370

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score =  106 bits (266), Expect = 6e-25
 Identities = 42/356 (11%), Positives = 79/356 (22%), Gaps = 90/356 (25%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
            +  CS   + T+  LLT    V     E      LA   G+  +   L  +        
Sbjct: 100 AITGCSSA-LDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAM 158

Query: 62  IKGE-CTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPR 120
           I+ E       AA +G               VL R                         
Sbjct: 159 IQAENYHAFRLAAENG------------HLHVLNR------------------------- 181

Query: 121 PQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 180
                 L +         ++             +   +    A   G++ +   LL    
Sbjct: 182 ------LCELAPTEATAMIQA------------ENYYAFRWAAVGRGHHNVINFLLDCPV 223

Query: 181 NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR 240
            +            +     G   +   +  H   +       +     +   G   +V 
Sbjct: 224 MLAY--------AEIHEFEYGEKYVNPFIARHVNRLK----EMHDAFKLSNPDGVFDLVT 271

Query: 241 VLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL--------LEYGAGINTHSNEFKES 292
                    +     G   L          +   +        ++  A   T   +    
Sbjct: 272 ---------KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGD-ANE 321

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQ 348
            L LA   G+      LLS  +                   G +++  + L+    
Sbjct: 322 LLRLALRLGNQGACALLLSIPSVLALTKA---NNYYINETGGRLDLRAVALEHHHH 374

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1 Length = 376

 Score = 81.9 bits (202), Expect = 8e-17
 Identities = 27/173 (15%), Positives = 45/173 (26%), Gaps = 34/173 (19%)

Query: 571 ENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYA 630
              + +   + L    N++    L+      +    + L       H K    +     A
Sbjct: 43  TLSYKEAIHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWS---DAHKKGIKSEVICFVA 99

Query: 631 CENGHTDVAD---LLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSL 682
              G +   D   LLL+    +     +N      AA+ GH +V+  L            
Sbjct: 100 AITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLC----------- 148

Query: 683 SSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
                              +         A   A ENGH  V + L       
Sbjct: 149 ------------ELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTE 189

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  153 bits (388), Expect = 2e-43
 Identities = 38/161 (23%), Positives = 65/161 (40%), Gaps = 13/161 (8%)

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239
           +++E          L  AA+ G +E VR L+  GA+ N  +S G  P+      G   V 
Sbjct: 7   SSMEP-----SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM-MMGSARVA 60

Query: 240 RVLLECGANVEDHNENGHT-PLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLAC 298
            +LL  GA     +    T P+ +AA  G +    +L   GA ++   + +    + LA 
Sbjct: 61  ELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VRDAWGRLPVDLAE 119

Query: 299 YKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA 339
             GH D+ R+L +A                  + +G  ++ 
Sbjct: 120 ELGHRDVARYLRAAAGGTRGS-----NHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  146 bits (371), Expect = 4e-41
 Identities = 39/156 (25%), Positives = 64/156 (41%), Gaps = 8/156 (5%)

Query: 519 LKNGANIEL-GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDV 577
           ++  A   +  ++  L  AA  G +E VR LL++GA  +A    G   +      G   V
Sbjct: 1   MEPAAGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARV 59

Query: 578 ADLLLSYGANL-----DNSTM-LIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYAC 631
           A+LLL +GA          T  + +AA+ G  + + +L      +  +   G   +  A 
Sbjct: 60  AELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAE 119

Query: 632 ENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVV 667
           E GH DVA  L +       S      A  G +++ 
Sbjct: 120 ELGHRDVARYLRAAAGGTRGSNHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  146 bits (371), Expect = 5e-41
 Identities = 38/138 (27%), Positives = 53/138 (38%), Gaps = 3/138 (2%)

Query: 210 INHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHV 269
           +   A  +         L  A A G    VR LLE GAN    N  G  P+      G  
Sbjct: 1   MEPAAGSS--MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQ-VMMMGSA 57

Query: 270 GVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALME 329
            VA++LL +GA  N          +  A  +G LD +  L  AGA  + +       +  
Sbjct: 58  RVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDL 117

Query: 330 ASMDGHVEVAKLLLDSGA 347
           A   GH +VA+ L  +  
Sbjct: 118 AEELGHRDVARYLRAAAG 135

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  136 bits (345), Expect = 2e-37
 Identities = 36/155 (23%), Positives = 57/155 (36%), Gaps = 9/155 (5%)

Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
            +     L+ A + G  E  + LL   AN       G   P+      G   +  LL+ H
Sbjct: 9   MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYG-RRPIQ-VMMMGSARVAELLLLH 66

Query: 213 GADVNGQSSSGNT-PLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGV 271
           GA+ N    +  T P+  A   G    + VL   GA ++  +  G  P+  A   GH  V
Sbjct: 67  GAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDV 126

Query: 272 AKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
           A+ L     G    ++        +   +G  D+ 
Sbjct: 127 ARYLRAAAGGTRGSNH------ARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  126 bits (318), Expect = 7e-34
 Identities = 33/146 (22%), Positives = 56/146 (38%), Gaps = 6/146 (4%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L  A + G V+ V+ LL  G + +     G   + +    G   +A++LL   A      
Sbjct: 16  LATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM-MMGSARVAELLLLHGAEPNCAD 74

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
                 P+ +AA  GF++ + +L   GA ++ + + G  P+  A   GH  V R L    
Sbjct: 75  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAA 134

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVA 272
                    G       A+ G   + 
Sbjct: 135 GGT-----RGSNHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score =  117 bits (296), Expect = 6e-31
 Identities = 32/123 (26%), Positives = 51/123 (41%), Gaps = 6/123 (4%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL----GASTPLMEAAQEGHLE 543
           GA  NA         + +   G    VA+ LL +GA          + P+ +AA+EG L+
Sbjct: 35  GANPNAPNSY-GRRPIQVMMMGS-ARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLD 92

Query: 544 LVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHA 603
            +  L  +GA++  +   G   +  A E GH DVA  L +       S      A  G +
Sbjct: 93  TLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEGPS 152

Query: 604 NVV 606
           ++ 
Sbjct: 153 DIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 62.1 bits (152), Expect = 2e-11
 Identities = 31/212 (14%), Positives = 45/212 (21%), Gaps = 65/212 (30%)

Query: 28  TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKL 87
            +     L+ A + G  E  + LL   AN       G   P+        G         
Sbjct: 9   MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYG-RRPIQVMM---MGSA------- 57

Query: 88  ADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGR 147
               V   L       L   A           RP     +  A  +G + T+  L   G 
Sbjct: 58  ---RVAELL-------LLHGAEPNCADPATLTRP-----VHDAAREGFLDTLVVLHRAGA 102

Query: 148 SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVR 207
            +      G                                    P+  A   G  ++ R
Sbjct: 103 RLDVRDAWG----------------------------------RLPVDLAEELGHRDVAR 128

Query: 208 LLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239
            L        G             A G   + 
Sbjct: 129 YLRAAAGGTRGS-----NHARIDAAEGPSDIP 155

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 48.6 bits (117), Expect = 7e-07
 Identities = 19/76 (25%), Positives = 31/76 (40%), Gaps = 1/76 (1%)

Query: 2  LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
          L  A + G V+ V+ LL  G + +     G   + +    G   +A++LL   A      
Sbjct: 16 LATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVM-MMGSARVAELLLLHGAEPNCAD 74

Query: 62 IKGECTPLMEAASSGF 77
                P+ +AA  GF
Sbjct: 75 PATLTRPVHDAAREGF 90

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 41.3 bits (98), Expect = 2e-04
 Identities = 14/72 (19%), Positives = 24/72 (33%), Gaps = 6/72 (8%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A  +G + T+  L   G  +      G   + LA   G+ ++A+ L A            
Sbjct: 85  AAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGS---- 140

Query: 65  ECTPLMEAASSG 76
                   A+ G
Sbjct: 141 --NHARIDAAEG 150

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A Length = 156

 Score = 40.9 bits (97), Expect = 3e-04
 Identities = 14/69 (20%), Positives = 24/69 (34%), Gaps = 2/69 (2%)

Query: 9   GDVKTVKKLLTEGRSVHETTDEGESL-LSLACSAGYYELAQVLLAMHANVEDRGIKGECT 67
           G  +  + LL  G   +       +  +  A   G+ +   VL    A ++ R   G   
Sbjct: 55  GSARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWG-RL 113

Query: 68  PLMEAASSG 76
           P+  A   G
Sbjct: 114 PVDLAEELG 122

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  149 bits (378), Expect = 2e-42
 Identities = 59/124 (47%), Positives = 80/124 (64%), Gaps = 1/124 (0%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
            TPL  AA +G +E+V+LL+  GADVN +  +G TPL  A   GH  VV++LLE GA+V 
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
             ++NG TPL  AA  GH+ V K+LLE GA +N   ++   + L LA   GHL++V+ LL
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLL 121

Query: 311 SAGA 314
            AGA
Sbjct: 122 EAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  145 bits (369), Expect = 4e-41
 Identities = 59/126 (46%), Positives = 79/126 (62%), Gaps = 1/126 (0%)

Query: 222 SGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
           +G TPL  A   GH  VV++LLE GA+V   ++NG TPL  AA  GH+ V K+LLE GA 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKL 341
           +N   ++   + L LA   GHL++V+ LL AGAD   K     T L  A+ +GH+EV KL
Sbjct: 61  VNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKL 119

Query: 342 LLDSGA 347
           LL++GA
Sbjct: 120 LLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  137 bits (347), Expect = 4e-38
 Identities = 57/122 (46%), Positives = 74/122 (60%), Gaps = 5/122 (4%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-- 588
           TPL  AA+ GHLE+V+ LL++GA V+AK + G T L  A  NGH +V  LLL  GA++  
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63

Query: 589 ---DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
              +  T L  AA+ GH  VV+LLL+    V+AK + G T L  A  NGH +V  LLL  
Sbjct: 64  KDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEA 123

Query: 646 GA 647
           GA
Sbjct: 124 GA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  110 bits (278), Expect = 7e-29
 Identities = 45/102 (44%), Positives = 59/102 (57%), Gaps = 4/102 (3%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLEL 544
           GA +NA  +    T L LA   G L+V   LL+ GA++        TPL  AA+ GHLE+
Sbjct: 25  GADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEV 83

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA 586
           V+ LL++GA V+AK + G T L  A  NGH +V  LLL  GA
Sbjct: 84  VKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  107 bits (269), Expect = 1e-27
 Identities = 55/150 (36%), Positives = 71/150 (47%), Gaps = 30/150 (20%)

Query: 589 DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
           +  T L  AA+ GH  VV+LLL+    V+AK + G T L  A  NGH +V  LLL  GA+
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 649 L-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVH 703
           +     +  T L  AA+ GH  VV+LLL                         G  + V+
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLL-----------------------EAG--ADVN 95

Query: 704 AKTQTGDTALTYACENGHTDVADLLLSYGA 733
           AK + G T L  A  NGH +V  LLL  GA
Sbjct: 96  AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score =  104 bits (262), Expect = 1e-26
 Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 1/118 (0%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           A  +G ++ VK LL  G  V+     G + L LA   G+ E+ ++LL   A+V  +   G
Sbjct: 9   AARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG 68

Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA 247
             TPL  AA +G +E+V+LL+  GADVN +  +G TPL  A   GH  VV++LLE GA
Sbjct: 69  -RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 98.2 bits (246), Expect = 1e-24
 Identities = 53/173 (30%), Positives = 73/173 (42%), Gaps = 52/173 (30%)

Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
           NG TPL  AA  GH+ V K+LLE GA +N   ++   + L LA   GHL++V+ LL AGA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGA 59

Query: 315 DQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTY 374
           D   K     T L  A+ +GH+EV KLLL++GA                           
Sbjct: 60  DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD-------------------------- 93

Query: 375 SRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 427
                                    V+     G + L LA   G+ E+ ++LL
Sbjct: 94  -------------------------VNAKDKNGRTPLHLAARNGHLEVVKLLL 121

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 88.6 bits (221), Expect = 4e-21
 Identities = 45/173 (26%), Positives = 55/173 (31%), Gaps = 81/173 (46%)

Query: 562 GDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQ 621
           G T L  A  NGH +V  LLL  GA+                            V+AK +
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGAD----------------------------VNAKDK 33

Query: 622 TGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGS 681
            G T L  A  NGH +V  LLL  GA+                                 
Sbjct: 34  NGRTPLHLAARNGHLEVVKLLLEAGAD--------------------------------- 60

Query: 682 LSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                               V+AK + G T L  A  NGH +V  LLL  GA+
Sbjct: 61  --------------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 93

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 80.9 bits (201), Expect = 2e-18
 Identities = 45/160 (28%), Positives = 62/160 (38%), Gaps = 52/160 (32%)

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA 352
            L LA   GHL++V+ LL AGAD   K     T L  A+ +GH+EV KLLL++GA     
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD---- 60

Query: 353 YARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS 412
                                                          V+     G + L 
Sbjct: 61  -----------------------------------------------VNAKDKNGRTPLH 73

Query: 413 LACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 452
           LA   G+ E+ ++LL   A+V  +   G  TPL  AA +G
Sbjct: 74  LAARNGHLEVVKLLLEAGADVNAKDKNG-RTPLHLAARNG 112

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 59.7 bits (146), Expect = 5e-11
 Identities = 54/229 (23%), Positives = 76/229 (33%), Gaps = 107/229 (46%)

Query: 325 TALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSD 384
           T L  A+ +GH+EV KLLL++GA                                     
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGAD------------------------------------ 27

Query: 385 GDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTP 444
                          V+     G + L LA   G+ E+ ++LL   A+V  +   G  TP
Sbjct: 28  ---------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG-RTP 71

Query: 445 LMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALT 504
           L  AA +G                       V      ++L  GA +NA           
Sbjct: 72  LHLAARNGH--------------------LEV----VKLLLEAGADVNAKD--------- 98

Query: 505 LACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGA 553
                          KNG        TPL  AA+ GHLE+V+ LL++GA
Sbjct: 99  ---------------KNG-------RTPLHLAARNGHLEVVKLLLEAGA 125

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 45.0 bits (108), Expect = 6e-06
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A  +G ++ VK LL  G  V+     G + L LA   G+ E+ ++LL   A+V  +   G
Sbjct: 42  AARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG 101

Query: 65  ECTPLMEAASSG 76
             TPL  AA +G
Sbjct: 102 -RTPLHLAARNG 112

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1 Length = 126

 Score = 44.3 bits (106), Expect = 1e-05
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 5  ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
          A  +G ++ VK LL  G  V+     G + L LA   G+ E+ ++LL   A+V  +   G
Sbjct: 9  AARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG 68

Query: 65 ECTPLMEAASSG 76
            TPL  AA +G
Sbjct: 69 -RTPLHLAARNG 79

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  151 bits (384), Expect = 5e-42
 Identities = 63/248 (25%), Positives = 99/248 (39%), Gaps = 21/248 (8%)

Query: 186 GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245
           G          A S    E+   ++   +          T L +AC+ GH  +V  LL+ 
Sbjct: 3   GCVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQL 62

Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM 305
           G  V D ++ G +PL  AASAG   + K LL  GA +N   N+   + L  A  K   ++
Sbjct: 63  GVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNA-VNQNGCTPLHYAASKNRHEI 121

Query: 306 VRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCE 365
              LL  GA+ + K     TA+  A+  G++++  +LL   A   +        P     
Sbjct: 122 AVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAS-TNIQDTEGNTP----- 175

Query: 366 RPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQV 425
                       L  AC +  V+  K L+T+G S++    E ++ L +A   G   L   
Sbjct: 176 ------------LHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA--KGGLGLILK 221

Query: 426 LLAMHANV 433
            LA     
Sbjct: 222 RLAEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  150 bits (381), Expect = 1e-41
 Identities = 66/193 (34%), Positives = 94/193 (48%), Gaps = 2/193 (1%)

Query: 156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGAD 215
              + +LA S    EL + +LA  +           T L  A S+G  EIV  L+  G  
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDS-RTALHWACSAGHTEIVEFLLQLGVP 65

Query: 216 VNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
           VN +  +G +PL  A + G + +V+ LL  GA+V   N+NG TPL  AAS     +A +L
Sbjct: 66  VNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVML 125

Query: 276 LEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGH 335
           LE GA  +   + +  +A+  A  KG+L MV  LL   A    +  E +T L  A  +  
Sbjct: 126 LEGGANPDA-KDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEER 184

Query: 336 VEVAKLLLDSGAQ 348
           VE AK L+  GA 
Sbjct: 185 VEEAKFLVTQGAS 197

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  144 bits (364), Expect = 3e-39
 Identities = 50/247 (20%), Positives = 86/247 (34%), Gaps = 40/247 (16%)

Query: 501 TALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHA 557
               LA  G   ++ + +L + +          T L  A   GH E+V +LL  G  V+ 
Sbjct: 9   MICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVND 68

Query: 558 KTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDF 612
           K   G + L  A   G  ++   LL  GA++     +  T L  AA      +  +LL+ 
Sbjct: 69  KDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 128

Query: 613 PRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVV 667
             +  AK     TA+  A   G+  +  +LL Y A+      + +T L  A         
Sbjct: 129 GANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEA 188

Query: 668 QLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADL 727
           + L+                          + + ++ + +   T L  A   G   +   
Sbjct: 189 KFLVT-------------------------QGASIYIENKEEKTPLQVA--KGGLGLILK 221

Query: 728 LLSYGAN 734
            L+ G  
Sbjct: 222 RLAEGEE 228

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  122 bits (308), Expect = 9e-32
 Identities = 62/186 (33%), Positives = 92/186 (49%), Gaps = 4/186 (2%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           ACS G  + V+ LL  G  V++  D G S L +A SAG  E+ + LL   A+V      G
Sbjct: 47  ACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNG 106

Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV 249
             TPL  AAS    EI  +L+  GA+ + +     T +  A A G+  +V +LL   A+ 
Sbjct: 107 C-TPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKAST 165

Query: 250 EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
              +  G+TPL  A     V  AK L+  GA I    N+ +++ L +A  KG L ++   
Sbjct: 166 NIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYI-ENKEEKTPLQVA--KGGLGLILKR 222

Query: 310 LSAGAD 315
           L+ G +
Sbjct: 223 LAEGEE 228

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  120 bits (302), Expect = 6e-31
 Identities = 55/253 (21%), Positives = 88/253 (34%), Gaps = 38/253 (15%)

Query: 407 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYAR 466
              + +LA S    EL + +LA  +           T L  A S+G      E V     
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDS-RTALHWACSAGHT----EIVE---- 57

Query: 467 HDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI 525
                             L+  G  +N   +    + L +A   G  ++   LL  GA++
Sbjct: 58  -----------------FLLQLGVPVNDKDDA-GWSPLHIAASAGXDEIVKALLVKGAHV 99

Query: 526 ELG---ASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLL 582
                   TPL  AA +   E+   LL+ GA   AK     TA+  A   G+  +  +LL
Sbjct: 100 NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILL 159

Query: 583 SYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTD 637
            Y A+      + +T L  A         + L+    S++ + +   T L  A   G   
Sbjct: 160 FYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA--KGGLG 217

Query: 638 VADLLLSYGANLD 650
           +    L+ G    
Sbjct: 218 LILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  114 bits (287), Expect = 7e-29
 Identities = 65/254 (25%), Positives = 100/254 (39%), Gaps = 31/254 (12%)

Query: 31  GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADP 90
              + +LA S    EL + +LA  +           T L  A S+G  ++          
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDS-RTALHWACSAGHTEIV--------- 56

Query: 91  EVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERS-LVQACSDGDVKTVKKLLTEGRSV 149
           E L          L             N +     S L  A S G  + VK LL +G  V
Sbjct: 57  EFL----------LQLGV-------PVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHV 99

Query: 150 HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLL 209
           +     G + L  A S   +E+A +LL   AN + +      T +  AA+ G +++V +L
Sbjct: 100 NAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDA-TAMHRAAAKGNLKMVHIL 158

Query: 210 INHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHV 269
           + + A  N Q + GNTPL  AC        + L+  GA++   N+   TPL  A   G +
Sbjct: 159 LFYKASTNIQDTEGNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK--GGL 216

Query: 270 GVAKILLEYGAGIN 283
           G+    L  G   +
Sbjct: 217 GLILKRLAEGEEAS 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  111 bits (280), Expect = 5e-28
 Identities = 63/301 (20%), Positives = 95/301 (31%), Gaps = 82/301 (27%)

Query: 292 SALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVS 351
               LA      ++   +L+  +       +  TAL  A   GH E+ + LL  G     
Sbjct: 9   MICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVP--- 65

Query: 352 AYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL 411
                                                           V++  D G S L
Sbjct: 66  ------------------------------------------------VNDKDDAGWSPL 77

Query: 412 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFP 471
            +A SAG  E+ + LL   A+V      G  TPL  AAS  R                  
Sbjct: 78  HIAASAGXDEIVKALLVKGAHVNAVNQNGC-TPLHYAASKNRH----------------- 119

Query: 472 NDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELG--- 528
                    A ++L  GA  +A       TA+  A   G L +   LL   A+  +    
Sbjct: 120 -------EIAVMLLEGGANPDAKDHY-DATAMHRAAAKGNLKMVHILLFYKASTNIQDTE 171

Query: 529 ASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 588
            +TPL  A  E  +E  ++L+  GA ++ + +   T L  A   G   +    L+ G   
Sbjct: 172 GNTPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVA--KGGLGLILKRLAEGEEA 229

Query: 589 D 589
            
Sbjct: 230 S 230

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  105 bits (264), Expect = 8e-26
 Identities = 37/198 (18%), Positives = 71/198 (35%), Gaps = 22/198 (11%)

Query: 562 GDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSV 616
                  A      ++ + +L+  +       D+ T L  A   GH  +V+ LL     V
Sbjct: 7   NIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 66

Query: 617 HAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLL 671
           + K   G + L  A   G  ++   LL  GA++     +  T L  AA      +  +LL
Sbjct: 67  NDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAVMLL 126

Query: 672 ----------DFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGH 721
                      +  + +  + +  +      L      +  + +   G+T L  AC+   
Sbjct: 127 EGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYK--ASTNIQDTEGNTPLHLACDEER 184

Query: 722 TDVADLLLSYGANLRNRT 739
            + A  L++ GA++    
Sbjct: 185 VEEAKFLVTQGASIYIEN 202

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score =  103 bits (258), Expect = 4e-25
 Identities = 54/246 (21%), Positives = 91/246 (36%), Gaps = 31/246 (12%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A S    +  +++L +      T  +  + L  ACSAG+ E+ + LL +   V D+   G
Sbjct: 14  AYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAG 73

Query: 65  ECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNE 124
             +PL  AAS+G                            +   A L +  + N   QN 
Sbjct: 74  W-SPLHIAASAG--------------------------XDEIVKALLVKGAHVNAVNQNG 106

Query: 125 RS-LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 183
            + L  A S    +    LL  G +         + +  A + G  ++  +LL   A+  
Sbjct: 107 CTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTN 166

Query: 184 DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL 243
            +  +G  TPL  A     +E  + L+  GA +  ++    TPL  A   G   ++   L
Sbjct: 167 IQDTEGN-TPLHLACDEERVEEAKFLVTQGASIYIENKEEKTPLQVAK--GGLGLILKRL 223

Query: 244 ECGANV 249
             G   
Sbjct: 224 AEGEEA 229

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A Length = 231

 Score = 88.8 bits (220), Expect = 5e-20
 Identities = 36/167 (21%), Positives = 61/167 (36%), Gaps = 17/167 (10%)

Query: 587 NLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
            + N  +   A  G    + + +L          Q   TAL +AC  GHT++ + LL  G
Sbjct: 4   CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLG 63

Query: 647 ANL-----DNSTMLIEAAKGGHANVVQLLL----------DFPRSVIGGSLSSPSDDSSS 691
             +        + L  AA  G   +V+ LL              + +  + S    + + 
Sbjct: 64  VPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQNGCTPLHYAASKNRHEIAV 123

Query: 692 HLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANLRNR 738
            L   G  +   AK     TA+  A   G+  +  +LL Y A+   +
Sbjct: 124 MLLEGG--ANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQ 168

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  146 bits (372), Expect = 3e-40
 Identities = 53/213 (24%), Positives = 84/213 (39%), Gaps = 27/213 (12%)

Query: 130 ACSDGDVKTVKKLL-TEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI- 187
           A  + DV+ + KLL  EG  VH+    GE+ L +A      E A VL+     +    + 
Sbjct: 10  AAKENDVQALSKLLKFEGCEVHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVFEPMT 69

Query: 188 ---KGECTPLMEAASSGFIEIVRLLINHGADVN-------------GQSSSGNTPLMYAC 231
                  T L  A  +  + +VR L+  GA V+                  G  PL +A 
Sbjct: 70  SELYEGQTALHIAVINQNVNLVRALLARGASVSARATGSVFHYRPHNLIYYGEHPLSFAA 129

Query: 232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA----KILLEYGAGIN---- 283
             G E +VR+L+E GA++   +  G+T L       +   A     +LL Y  G +    
Sbjct: 130 CVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNKTFACQMYNLLLSYDGGDHLKSL 189

Query: 284 -THSNEFKESALTLACYKGHLDMVRFLLSAGAD 315
               N    +   LA  +G++ M + L+     
Sbjct: 190 ELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKH 222

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  145 bits (368), Expect = 8e-40
 Identities = 47/254 (18%), Positives = 85/254 (33%), Gaps = 54/254 (21%)

Query: 500 ETALTLACCGGFLD-VADFLLKNGANI----ELGASTPLMEAAQEGHLELVRYLLDSGAQ 554
           E+ L LA     +  ++  L   G  +     +G  T L  AA   +LE    L+++  +
Sbjct: 4   ESPLLLAAKENDVQALSKLLKFEGCEVHQRGAMG-ETALHIAALYDNLEAAMVLMEAAPE 62

Query: 555 V-----HAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLL 609
           +      ++   G TAL  A  N + ++   LL+ GA++         A G         
Sbjct: 63  LVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGASVS------ARATGS-------- 108

Query: 610 LDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHA 664
             F    H     G+  L++A   G  ++  LL+ +GA++       +T+L       + 
Sbjct: 109 -VFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEHGADIRAQDSLGNTVLHILILQPNK 167

Query: 665 NVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQG----KKSGVHAKTQTGDTALTYACENG 720
                + +                    L S       KS        G T    A   G
Sbjct: 168 TFACQMYNL-------------------LLSYDGGDHLKSLELVPNNQGLTPFKLAGVEG 208

Query: 721 HTDVADLLLSYGAN 734
           +  +   L+    +
Sbjct: 209 NIVMFQHLMQKRKH 222

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score =  108 bits (271), Expect = 9e-27
 Identities = 48/281 (17%), Positives = 86/281 (30%), Gaps = 71/281 (25%)

Query: 256 GHTPLMEAASAGHVG-VAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
             +PL+ AA    V  ++K+L   G  ++       E+AL +A    +L+    L+ A  
Sbjct: 3   WESPLLLAAKENDVQALSKLLKFEGCEVHQR-GAMGETALHIAALYDNLEAAMVLMEAAP 61

Query: 315 D-----QEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSS 369
           +        +  E  TAL  A ++ +V + + LL  GA                      
Sbjct: 62  ELVFEPMTSELYEGQTALHIAVINQNVNLVRALLARGA---------------------- 99

Query: 370 ISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM 429
                            V             H     GE  LS A   G  E+ ++L+  
Sbjct: 100 ----------------SVSARATGSVFHYRPHNLIYYGEHPLSFAACVGSEEIVRLLIEH 143

Query: 430 HANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGA 489
            A++  +   G  T L                           +K+      +++L    
Sbjct: 144 GADIRAQDSLGN-TVLHILILQ--------------------PNKTFACQMYNLLLSYDG 182

Query: 490 KINAHTEETQ-----ETALTLACCGGFLDVADFLLKNGANI 525
             +  + E        T   LA   G + +   L++   +I
Sbjct: 183 GDHLKSLELVPNNQGLTPFKLAGVEGNIVMFQHLMQKRKHI 223

>2rfa_A Transient receptor potential cation channel subfa member 6; TRPV6, ankyrin reapeat, ANK RE calcium channel, calcium transport, calmodulin-binding; 1.70A {Mus musculus} Length = 232

 Score = 53.0 bits (128), Expect = 7e-08
 Identities = 15/116 (12%), Positives = 26/116 (22%), Gaps = 54/116 (46%)

Query: 623 GDTALTYACENGHTD-VADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGS 681
            ++ L  A +      ++ LL   G                                   
Sbjct: 3   WESPLLLAAKENDVQALSKLLKFEGCE--------------------------------- 29

Query: 682 LSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANLRN 737
                               VH +   G+TAL  A    + + A +L+     L  
Sbjct: 30  --------------------VHQRGAMGETALHIAALYDNLEAAMVLMEAAPELVF 65

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  141 bits (359), Expect = 1e-39
 Identities = 40/139 (28%), Positives = 63/139 (45%), Gaps = 2/139 (1%)

Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVA 272
           G D    +  G T L  A   G    V  LL+ G++    +  G TPL EA + GH+ V 
Sbjct: 1   GIDPF-TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59

Query: 273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASM 332
           ++LL++ A +NT   +  +S L  A   GH+D+V+ LLS GA +          +     
Sbjct: 60  ELLLQHKALVNTTGYQ-NDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDD 118

Query: 333 DGHVEVAKLLLDSGAQSVS 351
           +    +  L   + + S S
Sbjct: 119 ESMKSLLLLPEKNESSSAS 137

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  139 bits (353), Expect = 6e-39
 Identities = 40/125 (32%), Positives = 57/125 (45%), Gaps = 1/125 (0%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
            T L  A+  G I  V  L+ +G+D N +  +G TPL  AC  GH  VV +LL+  A V 
Sbjct: 11  ETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVN 70

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
                  +PL +AA  GHV + K+LL YGA  N   N F    +     +    ++    
Sbjct: 71  TTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRN-AVNIFGLRPVDYTDDESMKSLLLLPE 129

Query: 311 SAGAD 315
              + 
Sbjct: 130 KNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  134 bits (340), Expect = 4e-37
 Identities = 40/135 (29%), Positives = 63/135 (46%), Gaps = 9/135 (6%)

Query: 522 GANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVA 578
           G +      G  T L  A+ +G +  V YLL +G+  + K   G T L  AC +GH  V 
Sbjct: 1   GIDPFTNHRG-ETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVV 59

Query: 579 DLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACEN 633
           +LLL + A +      N + L +AAK GH ++V+LLL +  S +A    G   + Y  + 
Sbjct: 60  ELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDE 119

Query: 634 GHTDVADLLLSYGAN 648
               +  L     ++
Sbjct: 120 SMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  131 bits (333), Expect = 4e-36
 Identities = 36/129 (27%), Positives = 58/129 (44%), Gaps = 1/129 (0%)

Query: 152 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLIN 211
           T   GE+LL +A   G     + LL   ++   +   G  TPL EA + G +++V LL+ 
Sbjct: 6   TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGW-TPLHEACNHGHLKVVELLLQ 64

Query: 212 HGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGV 271
           H A VN      ++PL  A   GH  +V++LL  GA+    N  G  P+          +
Sbjct: 65  HKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSL 124

Query: 272 AKILLEYGA 280
             +  +  +
Sbjct: 125 LLLPEKNES 133

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score =  106 bits (267), Expect = 3e-27
 Identities = 27/103 (26%), Positives = 45/103 (43%), Gaps = 4/103 (3%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLEL 544
           G+  N        T L  AC  G L V + LL++ A +        +PL +AA+ GH+++
Sbjct: 33  GSDPNVKDHA-GWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDI 91

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
           V+ LL  GA  +A    G   + Y  +     +  L     ++
Sbjct: 92  VKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 89.4 bits (223), Expect = 2e-21
 Identities = 37/183 (20%), Positives = 50/183 (27%), Gaps = 82/183 (44%)

Query: 552 GAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLD 611
           G         G+T L  A   G     + LL  G++                        
Sbjct: 1   GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSD------------------------ 35

Query: 612 FPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLL 671
                + K   G T L  AC +GH  V +LLL + A                        
Sbjct: 36  ----PNVKDHAGWTPLHEACNHGHLKVVELLLQHKAL----------------------- 68

Query: 672 DFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSY 731
                                         V+      D+ L  A +NGH D+  LLLSY
Sbjct: 69  ------------------------------VNTTGYQNDSPLHDAAKNGHVDIVKLLLSY 98

Query: 732 GAN 734
           GA+
Sbjct: 99  GAS 101

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 69.4 bits (171), Expect = 3e-14
 Identities = 36/174 (20%), Positives = 54/174 (31%), Gaps = 54/174 (31%)

Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEV 338
           G    T  N   E+ L +A  KG +  V +LL  G+D   K     T L EA   GH   
Sbjct: 1   GIDPFT--NHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGH--- 55

Query: 339 AKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGR 398
                                                           +K V+ LL    
Sbjct: 56  ------------------------------------------------LKVVELLLQHKA 67

Query: 399 SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 452
            V+ T  + +S L  A   G+ ++ ++LL+  A+     I G   P+       
Sbjct: 68  LVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFGL-RPVDYTDDES 120

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 67.4 bits (166), Expect = 1e-13
 Identities = 29/145 (20%), Positives = 51/145 (35%), Gaps = 28/145 (19%)

Query: 381 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 440
           A   GD+ +V+ LL  G   +     G + L  AC+ G+ ++ ++LL   A V   G + 
Sbjct: 17  ASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQN 76

Query: 441 ECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTEETQ 499
             +PL +AA +G                          +    +L+  GA  NA      
Sbjct: 77  -DSPLHDAAKNGH-------------------------VDIVKLLLSYGASRNAVNIF-G 109

Query: 500 ETALTLACCGGFLDVADFLLKNGAN 524
              +          +     KN ++
Sbjct: 110 LRPVDYTDDESMKSLLLLPEKNESS 134

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 56.7 bits (138), Expect = 7e-10
 Identities = 22/72 (30%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 5  ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
          A   GD+ +V+ LL  G   +     G + L  AC+ G+ ++ ++LL   A V   G + 
Sbjct: 17 ASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQN 76

Query: 65 ECTPLMEAASSG 76
            +PL +AA +G
Sbjct: 77 -DSPLHDAAKNG 87

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 46.3 bits (111), Expect = 3e-06
 Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 1/72 (1%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           AC+ G +K V+ LL     V+ T  + +S L  A   G+ ++ ++LL+  A+     I G
Sbjct: 50  ACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGHVDIVKLLLSYGASRNAVNIFG 109

Query: 65  ECTPLMEAASSG 76
              P+       
Sbjct: 110 L-RPVDYTDDES 120

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1 Length = 137

 Score = 44.7 bits (107), Expect = 1e-05
 Identities = 36/190 (18%), Positives = 53/190 (27%), Gaps = 62/190 (32%)

Query: 27  TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGK 86
           T   GE+LL +A   G     + LL   ++   +   G  TPL EA + G  K+      
Sbjct: 6   TNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGW-TPLHEACNHGHLKVV----- 59

Query: 87  LADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERS-LVQACSDGDVKTVKKLLTE 145
               E+L          L   A         N       S L  A  +G V  VK LL+ 
Sbjct: 60  ----ELL----------LQHKA-------LVNTTGYQNDSPLHDAAKNGHVDIVKLLLSY 98

Query: 146 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEI 205
           G S +     G                                    P+          +
Sbjct: 99  GASRNAVNIFGL----------------------------------RPVDYTDDESMKSL 124

Query: 206 VRLLINHGAD 215
           + L   + + 
Sbjct: 125 LLLPEKNESS 134

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  141 bits (356), Expect = 7e-38
 Identities = 56/274 (20%), Positives = 90/274 (32%), Gaps = 57/274 (20%)

Query: 123 NERSLVQACSDGDVKTVKKLLTEGRS--------VHETTDEGESLLSLA---CSAGYYEL 171
           +   L    S G  + +  LL   R          +     G++ L  A      G    
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 172 AQVLLA-----------MHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS 220
              LL            ++A   D   +G  + L  A     ++ V+LL+ +GADV+ ++
Sbjct: 62  IMPLLQIDKDSGNPKPLVNAQCTDEFYQGH-SALHIAIEKRSLQCVKLLVENGADVHLRA 120

Query: 221 SS-------------GNTPLMYACAGGHEAVVRVLLECG---ANVEDHNENGHTPLMEAA 264
                          G  PL  A       VV  LLE     A++E  +  G+T L    
Sbjct: 121 CGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALV 180

Query: 265 SAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMH 324
                                 N  + SAL +  Y G L M   L      +E    +  
Sbjct: 181 MIAD------------------NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGL 222

Query: 325 TALMEASMDGHVEVAKLLLDSGAQSVSAYARHDF 358
           T L  A+ +G +E+ + +L       +A+  H  
Sbjct: 223 TPLKLAAKEGKIEIFRHILQREFSGAAAHHHHHH 256

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  121 bits (304), Expect = 6e-31
 Identities = 49/295 (16%), Positives = 85/295 (28%), Gaps = 68/295 (23%)

Query: 376 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 435
             L    S G  + +  LL             E L   +                 +   
Sbjct: 4   DRLFSVVSRGVPEELTGLL-------------EYLRWNSKYLT------------DSAYT 38

Query: 436 RGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHT 495
            G  G+ T LM+A  +  Q  +N  +    + D    +            +  A+     
Sbjct: 39  EGSTGK-TCLMKAVLNL-QDGVNACIMPLLQIDKDSGN---------PKPLVNAQCTDEF 87

Query: 496 EETQETALTLACCGGFLDVADFLLKNGANIELGAS----------------TPLMEAAQE 539
            +   +AL +A     L     L++NGA++ L A                  PL  AA  
Sbjct: 88  YQ-GHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACT 146

Query: 540 GHLELVRYLLDSG---AQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIE 596
              ++V YLL++    A + A    G+T L                        ++ L+ 
Sbjct: 147 KQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNS------------PENSALVI 194

Query: 597 AAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 651
               G   +   L    +        G T L  A + G  ++   +L    +   
Sbjct: 195 HMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAA 249

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  114 bits (286), Expect = 2e-28
 Identities = 41/239 (17%), Positives = 62/239 (25%), Gaps = 72/239 (30%)

Query: 531 TPLMEAA---QEGHLELVRYLLDSG-----------AQVHAKTQTGDTALTYACENGHTD 576
           T LM+A    Q+G    +  LL              AQ   +   G +AL  A E     
Sbjct: 45  TCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQ 104

Query: 577 VADLLLSYGANLD------------------NSTMLIEAAKGGHANVVQLLLDFPR---S 615
              LL+  GA++                       L  AA     +VV  LL+ P    S
Sbjct: 105 CVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPAS 164

Query: 616 VHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPR 675
           + A    G+T L                        ++ L+     G   +   L     
Sbjct: 165 LEATDSLGNTVLHALVMIADNS------------PENSALVIHMYDGLLQMGARLCP--- 209

Query: 676 SVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                                            G T L  A + G  ++   +L    +
Sbjct: 210 ----------------------TVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFS 246

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score =  103 bits (259), Expect = 5e-25
 Identities = 40/236 (16%), Positives = 63/236 (26%), Gaps = 56/236 (23%)

Query: 531 TPLMEAAQEGHLELVRYLLDS--------GAQVHAKTQTGDTALTYA---CENGHTDVAD 579
             L      G  E +  LL+             + +  TG T L  A    ++G      
Sbjct: 4   DRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIM 63

Query: 580 LLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVA 639
            LL    +  N   L+ A                     +   G +AL  A E       
Sbjct: 64  PLLQIDKDSGNPKPLVNA-----------------QCTDEFYQGHSALHIAIEKRSLQCV 106

Query: 640 DLLLSYGANLD------------------NSTMLIEAAKGGHANVVQLLLDFPRSVIGGS 681
            LL+  GA++                       L  AA     +VV  LL+        S
Sbjct: 107 KLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLE--NPHQPAS 164

Query: 682 LSSPSDDSSS--HLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
           L +     ++  H         + A     ++AL     +G   +   L       
Sbjct: 165 LEATDSLGNTVLHALV------MIADNSPENSALVIHMYDGLLQMGARLCPTVQLE 214

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 99.1 bits (247), Expect = 2e-23
 Identities = 59/358 (16%), Positives = 88/358 (24%), Gaps = 121/358 (33%)

Query: 223 GNTPLMYACAGGHEAVVRVLLE--------CGANVEDHNENGHTPLMEAA---SAGHVGV 271
               L    + G    +  LLE           +       G T LM+A      G    
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 272 AKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEAS 331
              LL+                          D         A    +  + H+AL  A 
Sbjct: 62  IMPLLQIDK-----------------------DSGNPKPLVNAQCTDEFYQGHSALHIAI 98

Query: 332 MDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVK 391
               ++  KLL+++GA  V   A   FF                                
Sbjct: 99  EKRSLQCVKLLVENGA-DVHLRACGRFFQ------------------------------- 126

Query: 392 KLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL---AMHANVEDRGIKGECTPLMEA 448
                 +        GE  LSLA     +++   LL      A++E     G  T L   
Sbjct: 127 ------KHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLG-NTVLHAL 179

Query: 449 ASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACC 508
                                                     + A       +AL +   
Sbjct: 180 V-----------------------------------------MIADNSPEN-SALVIHMY 197

Query: 509 GGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD 563
            G L +   L       E+      TPL  AA+EG +E+ R++L       A      
Sbjct: 198 DGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHHHH 255

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 92.5 bits (230), Expect = 4e-21
 Identities = 51/288 (17%), Positives = 78/288 (27%), Gaps = 70/288 (24%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           L    S G  + +  LL             E L   +                 +    G
Sbjct: 6   LFSVVSRGVPEELTGLL-------------EYLRWNSKYLT------------DSAYTEG 40

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
             G+ T LM+A       L   DG       +  L   +    D                
Sbjct: 41  STGK-TCLMKAV------LNLQDGVN---ACIMPL---LQIDKDSGNPKPLVNAQCTDEF 87

Query: 122 QNERS-LVQACSDGDVKTVKKLLTEGRSVHETTDE-------------GESLLSLACSAG 167
               S L  A     ++ VK L+  G  VH                  GE  LSLA    
Sbjct: 88  YQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTK 147

Query: 168 YYELAQVLL------------------AMHANVEDRGIKGECTPLMEAASSGFIEIVRLL 209
            +++   LL                   +HA V       E + L+     G +++   L
Sbjct: 148 QWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARL 207

Query: 210 INHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGH 257
                     +  G TPL  A   G   + R +L+   +    + + H
Sbjct: 208 CPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSGAAAHHHHH 255

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A Length = 256

 Score = 59.0 bits (143), Expect = 8e-10
 Identities = 25/157 (15%), Positives = 40/157 (25%), Gaps = 53/157 (33%)

Query: 590 NSTMLIEAAKGGHANVVQLLLDFPRS--------VHAKTQTGDTALTYA---CENGHTDV 638
           +   L      G    +  LL++ R          + +  TG T L  A    ++G    
Sbjct: 2   DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNAC 61

Query: 639 ADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGK 698
              LL    +  N   L+ A                                        
Sbjct: 62  IMPLLQIDKDSGNPKPLVNA---------------------------------------- 81

Query: 699 KSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
                 +   G +AL  A E        LL+  GA++
Sbjct: 82  --QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADV 116

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  134 bits (340), Expect = 3e-37
 Identities = 35/120 (29%), Positives = 53/120 (44%), Gaps = 1/120 (0%)

Query: 221 SSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA 280
           S  +   M+A   G    V+  +  G +V    E G  PL  AA  G + + + LL  GA
Sbjct: 5   SMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGA 64

Query: 281 GINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAK 340
            IN   ++   + L  A Y+GH+  V+ LLS GAD+  K  +  TA           + +
Sbjct: 65  DINA-PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  133 bits (338), Expect = 5e-37
 Identities = 31/117 (26%), Positives = 50/117 (42%), Gaps = 1/117 (0%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
               M A  +G ++ V+  +  G DVN     G  PL YA   G   ++  LL  GA++ 
Sbjct: 8   DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 67

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVR 307
             +++  TPL+ A   GHV   K+LL  GA           +A      +    +++
Sbjct: 68  APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTV-KGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  122 bits (309), Expect = 4e-33
 Identities = 29/114 (25%), Positives = 46/114 (40%), Gaps = 5/114 (4%)

Query: 530 STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL- 588
               M A + G L+ V+  +  G  V+   + G   L YA + G  ++ + LL  GA++ 
Sbjct: 8   DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 67

Query: 589 ----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDV 638
                + T L+ A   GH + V+LLL        K   G TA           +
Sbjct: 68  APDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score =  122 bits (309), Expect = 5e-33
 Identities = 30/118 (25%), Positives = 48/118 (40%), Gaps = 1/118 (0%)

Query: 156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGAD 215
            +     A   G  +  +  +A   +V      G   PL  AA  G +EI+  L+  GAD
Sbjct: 7   CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGG-RKPLHYAADCGQLEILEFLLLKGAD 65

Query: 216 VNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAK 273
           +N       TPL+ A   GH + V++LL  GA+      +G T      +     + +
Sbjct: 66  INAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 99.4 bits (249), Expect = 7e-25
 Identities = 30/114 (26%), Positives = 51/114 (44%), Gaps = 1/114 (0%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
            + A  +GD+  VK  + +G  V+ T + G   L  A   G  E+ + LL   A++    
Sbjct: 11  FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 70

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR 240
                TPL+ A   G +  V+LL++ GAD   +   G T          +A+++
Sbjct: 71  KHH-ITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 95.5 bits (239), Expect = 1e-23
 Identities = 29/93 (31%), Positives = 38/93 (40%), Gaps = 4/93 (4%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELG---ASTPLMEAAQEGHLEL 544
           G  +N   E      L  A   G L++ +FLL  GA+I        TPL+ A  EGH+  
Sbjct: 30  GEDVNRTLEG-GRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSC 88

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDV 577
           V+ LL  GA    K   G TA           +
Sbjct: 89  VKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 94.4 bits (236), Expect = 3e-23
 Identities = 29/143 (20%), Positives = 48/143 (33%), Gaps = 30/143 (20%)

Query: 587 NLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
                   + A K G  + V+  +     V+   + G   L YA + G  ++ + LL  G
Sbjct: 4   GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG 63

Query: 647 ANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSG 701
           A++      + T L+ A   GH + V+LLL                       S+G  + 
Sbjct: 64  ADINAPDKHHITPLLSAVYEGHVSCVKLLL-----------------------SKG--AD 98

Query: 702 VHAKTQTGDTALTYACENGHTDV 724
              K   G TA           +
Sbjct: 99  KTVKGPDGLTAFEATDNQAIKAL 121

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 85.9 bits (214), Expect = 3e-20
 Identities = 28/173 (16%), Positives = 44/173 (25%), Gaps = 81/173 (46%)

Query: 562 GDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQ 621
            D    +A +NG  D     ++ G +                            V+   +
Sbjct: 7   CDKEFMWALKNGDLDEVKDYVAKGED----------------------------VNRTLE 38

Query: 622 TGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGS 681
            G   L YA + G  ++ + LL  GA+                                 
Sbjct: 39  GGRKPLHYAADCGQLEILEFLLLKGAD--------------------------------- 65

Query: 682 LSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                               ++A  +   T L  A   GH     LLLS GA+
Sbjct: 66  --------------------INAPDKHHITPLLSAVYEGHVSCVKLLLSKGAD 98

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 75.5 bits (187), Expect = 1e-16
 Identities = 24/166 (14%), Positives = 43/166 (25%), Gaps = 52/166 (31%)

Query: 287 NEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSG 346
               +     A   G LD V+  ++ G D     +     L  A+  G +E+ + LL  G
Sbjct: 4   GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKG 63

Query: 347 AQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDE 406
           A                                                    ++     
Sbjct: 64  AD---------------------------------------------------INAPDKH 72

Query: 407 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG 452
             + L  A   G+    ++LL+  A+   +G  G  T      +  
Sbjct: 73  HITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDG-LTAFEATDNQA 117

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 60.9 bits (149), Expect = 2e-11
 Identities = 28/172 (16%), Positives = 45/172 (26%), Gaps = 62/172 (36%)

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 437
            + A  +GD+  VK  + +G  V+ T + G   L  A   G  E+ + LL   A++    
Sbjct: 11  FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 70

Query: 438 IKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEE 497
                TPL+ A   G                                         H   
Sbjct: 71  KHH-ITPLLSAVYEG-----------------------------------------HVS- 87

Query: 498 TQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVR 546
                               LL  GA+  +      T       +    L++
Sbjct: 88  ----------------CVKLLLSKGADKTVKGPDGLTAFEATDNQAIKALLQ 123

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 49.7 bits (120), Expect = 2e-07
 Identities = 21/75 (28%), Positives = 33/75 (44%), Gaps = 1/75 (1%)

Query: 2  LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           + A  +GD+  VK  + +G  V+ T + G   L  A   G  E+ + LL   A++    
Sbjct: 11 FMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPD 70

Query: 62 IKGECTPLMEAASSG 76
               TPL+ A   G
Sbjct: 71 KHH-ITPLLSAVYEG 84

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A Length = 123

 Score = 42.4 bits (101), Expect = 6e-05
 Identities = 14/72 (19%), Positives = 29/72 (40%), Gaps = 1/72 (1%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A   G ++ ++ LL +G  ++       + L  A   G+    ++LL+  A+   +G  G
Sbjct: 47  AADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDG 106

Query: 65  ECTPLMEAASSG 76
             T      +  
Sbjct: 107 -LTAFEATDNQA 117

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  134 bits (341), Expect = 4e-37
 Identities = 47/120 (39%), Positives = 73/120 (60%), Gaps = 1/120 (0%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
             L+EAA +G  + VR+L+ +GADVN +   G TPL  A A GH  +V VLL+ GA+V  
Sbjct: 16  KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNA 75

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
            +  G TPL  AA  GH+ +A++LL++GA +N   ++F ++A  ++   G+ D+   L  
Sbjct: 76  VDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNA-QDKFGKTAFDISIGNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  134 bits (339), Expect = 6e-37
 Identities = 42/136 (30%), Positives = 72/136 (52%), Gaps = 9/136 (6%)

Query: 515 ADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGH 574
           +     +G+++       L+EAA+ G  + VR L+ +GA V+AK + G T L  A  +GH
Sbjct: 4   SHHHHHHGSDLG----KKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGH 59

Query: 575 TDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTY 629
            ++ ++LL  GA++        T L  AA  GH  + ++LL     V+A+ + G TA   
Sbjct: 60  LEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDI 119

Query: 630 ACENGHTDVADLLLSY 645
           +  NG+ D+A++L   
Sbjct: 120 SIGNGNEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  131 bits (333), Expect = 4e-36
 Identities = 41/135 (30%), Positives = 69/135 (51%), Gaps = 8/135 (5%)

Query: 209 LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH 268
             +HG+D           L+ A   G +  VR+L+  GA+V   +E G TPL  A + GH
Sbjct: 7   HHHHGSD-------LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGH 59

Query: 269 VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALM 328
           + + ++LL+ GA +N   +    + L LA + GHL++   LL  GAD   +     TA  
Sbjct: 60  LEIVEVLLKNGADVNA-VDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFD 118

Query: 329 EASMDGHVEVAKLLL 343
            +  +G+ ++A++L 
Sbjct: 119 ISIGNGNEDLAEILQ 133

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  117 bits (296), Expect = 4e-31
 Identities = 42/119 (35%), Positives = 64/119 (53%), Gaps = 1/119 (0%)

Query: 160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ 219
           L  A  AG  +  ++L+A  A+V  +   G  TPL  A + G +EIV +L+ +GADVN  
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDEYGL-TPLYLATAHGHLEIVEVLLKNGADVNAV 76

Query: 220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278
            + G TPL  A   GH  +  VLL+ GA+V   ++ G T    +   G+  +A+IL + 
Sbjct: 77  DAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  104 bits (261), Expect = 2e-26
 Identities = 39/175 (22%), Positives = 64/175 (36%), Gaps = 58/175 (33%)

Query: 562 GDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQ 621
               L  A   G  D   +L++ GA+                            V+AK +
Sbjct: 14  LGKKLLEAARAGQDDEVRILMANGAD----------------------------VNAKDE 45

Query: 622 TGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRS 676
            G T L  A  +GH ++ ++LL  GA++        T L  AA  GH  + ++LL     
Sbjct: 46  YGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLL----- 100

Query: 677 VIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSY 731
                               G  + V+A+ + G TA   +  NG+ D+A++L   
Sbjct: 101 ------------------KHG--ADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score =  102 bits (257), Expect = 8e-26
 Identities = 37/103 (35%), Positives = 54/103 (52%), Gaps = 2/103 (1%)

Query: 246 GANV-EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD 304
           G++    H  +    L+EAA AG     +IL+  GA +N   +E+  + L LA   GHL+
Sbjct: 3   GSHHHHHHGSDLGKKLLEAARAGQDDEVRILMANGADVNA-KDEYGLTPLYLATAHGHLE 61

Query: 305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           +V  LL  GAD         T L  A+  GH+E+A++LL  GA
Sbjct: 62  IVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGA 104

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 98.6 bits (247), Expect = 1e-24
 Identities = 40/100 (40%), Positives = 55/100 (55%), Gaps = 4/100 (4%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIE---LGASTPLMEAAQEGHLEL 544
           GA +NA  E    T L LA   G L++ + LLKNGA++        TPL  AA  GHLE+
Sbjct: 37  GADVNAKDEY-GLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEI 95

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSY 584
              LL  GA V+A+ + G TA   +  NG+ D+A++L   
Sbjct: 96  AEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKL 135

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 95.5 bits (239), Expect = 2e-23
 Identities = 40/118 (33%), Positives = 60/118 (50%), Gaps = 1/118 (0%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L++A   G    V+ L+  G  V+   + G + L LA + G+ E+ +VLL   A+V    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD 77

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
             G  TPL  AA  G +EI  +L+ HGADVN Q   G T    +   G+E +  +L +
Sbjct: 78  AIGF-TPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 72.0 bits (178), Expect = 3e-15
 Identities = 38/182 (20%), Positives = 61/182 (33%), Gaps = 60/182 (32%)

Query: 272 AKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEAS 331
           +     +G+ +           L  A   G  D VR L++ GAD   K +   T L  A+
Sbjct: 4   SHHHHHHGSDLGK--------KLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLAT 55

Query: 332 MDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVK 391
             GH+E+ ++LL +GA                                            
Sbjct: 56  AHGHLEIVEVLLKNGA-------------------------------------------- 71

Query: 392 KLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS 451
                   V+     G + L LA   G+ E+A+VLL   A+V  +   G+ T    +  +
Sbjct: 72  -------DVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFGK-TAFDISIGN 123

Query: 452 GR 453
           G 
Sbjct: 124 GN 125

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 59.3 bits (145), Expect = 8e-11
 Identities = 23/96 (23%), Positives = 42/96 (43%), Gaps = 27/96 (28%)

Query: 639 ADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGK 698
           +     +G++L     L+EAA+ G  + V++L+                       + G 
Sbjct: 4   SHHHHHHGSDLG--KKLLEAARAGQDDEVRILM-----------------------ANGA 38

Query: 699 KSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
              V+AK + G T L  A  +GH ++ ++LL  GA+
Sbjct: 39  D--VNAKDEYGLTPLYLATAHGHLEIVEVLLKNGAD 72

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 49.3 bits (119), Expect = 3e-07
 Identities = 38/144 (26%), Positives = 59/144 (40%), Gaps = 28/144 (19%)

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 437
           L++A   G    V+ L+  G  V+   + G + L LA + G+ E+ +VLL   A+V    
Sbjct: 18  LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD 77

Query: 438 IKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP-GAKINAHTE 496
             G  TPL  AA  G      E                        +L+  GA +NA  +
Sbjct: 78  AIGF-TPLHLAAFIGHL----EIAE---------------------VLLKHGADVNAQDK 111

Query: 497 ETQETALTLACCGGFLDVADFLLK 520
             + TA  ++   G  D+A+ L K
Sbjct: 112 FGK-TAFDISIGNGNEDLAEILQK 134

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 44.3 bits (106), Expect = 2e-05
 Identities = 25/75 (33%), Positives = 37/75 (49%), Gaps = 1/75 (1%)

Query: 2  LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
          L++A   G    V+ L+  G  V+   + G + L LA + G+ E+ +VLL   A+V    
Sbjct: 18 LLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVD 77

Query: 62 IKGECTPLMEAASSG 76
            G  TPL  AA  G
Sbjct: 78 AIGF-TPLHLAAFIG 91

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C Length = 136

 Score = 40.4 bits (96), Expect = 3e-04
 Identities = 22/72 (30%), Positives = 36/72 (50%), Gaps = 1/72 (1%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
           A + G ++ V+ LL  G  V+     G + L LA   G+ E+A+VLL   A+V  +   G
Sbjct: 54  ATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAAFIGHLEIAEVLLKHGADVNAQDKFG 113

Query: 65  ECTPLMEAASSG 76
           + T    +  +G
Sbjct: 114 K-TAFDISIGNG 124

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  134 bits (339), Expect = 2e-36
 Identities = 29/182 (15%), Positives = 56/182 (30%), Gaps = 16/182 (8%)

Query: 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGE--CTPLMEAASSGFIEIVRLLINH 212
                +S A   G YE    L       ++  +K       L         +I   LIN 
Sbjct: 5   SEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINK 64

Query: 213 GADVNGQSSSGNTPLMYACAGGHEAV------VRVLLECGANVEDHNENGHTPLMEAASA 266
           GAD+  ++  G T       GG   +       ++ LE GA++    +     + +    
Sbjct: 65  GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFN 124

Query: 267 GHVGVAK-------ILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHK 319
             V   +       I  + G  +    +++  +AL           ++ +         K
Sbjct: 125 YFVDENEMIPLYKLIFSQSGLQLL-IKDKWGLTALEFVKRCQKPIALKMMEDYIKKYNLK 183

Query: 320 TD 321
            +
Sbjct: 184 EN 185

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  133 bits (337), Expect = 4e-36
 Identities = 30/176 (17%), Positives = 49/176 (27%), Gaps = 17/176 (9%)

Query: 188 KGECTPLMEAASSGFIEIVRLLINHGADV---NGQSSSGNTPLMYACAGGHEAVVRVLLE 244
             E   +  AA  G  E    L   G +      +S+     L          +   L+ 
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLIN 63

Query: 245 CGANVEDHNENGHTPLMEAASAGH------VGVAKILLEYGAGINTHSNEFKESALTLAC 298
            GA+++   + G T        G         + KI LE GA I     +  +  +    
Sbjct: 64  KGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT-ALYKPYKIVVFKNI 122

Query: 299 YKGHLDMVR-------FLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           +   +D              +G     K     TAL            K++ D   
Sbjct: 123 FNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIK 178

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  120 bits (303), Expect = 1e-31
 Identities = 25/177 (14%), Positives = 59/177 (33%), Gaps = 24/177 (13%)

Query: 498 TQETALTLACCGGFLDVADFLLKNGANIEL--GASTPLMEA----AQEGHLELVRYLLDS 551
           ++   ++ A   G  +    L + G   +     S  L +       E   ++  +L++ 
Sbjct: 5   SEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINK 64

Query: 552 GAQVHAKTQTGDTALTYACENGHTDVAD------LLLSYGANL-----DNSTMLIEAAKG 600
           GA + ++T+ G T      + G  D+        + L  GA++         ++ +    
Sbjct: 65  GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFN 124

Query: 601 GH------ANVVQLLLDFPRS-VHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
                     + +L+       +  K + G TAL +           ++  Y    +
Sbjct: 125 YFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYN 181

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score =  114 bits (286), Expect = 3e-29
 Identities = 26/219 (11%), Positives = 58/219 (26%), Gaps = 60/219 (27%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQV---HAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
             +  AA  G  E    L + G +      K+      L    +     ++  L++ GA+
Sbjct: 8   RTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD 67

Query: 588 LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVAD------L 641
                                       + ++T+ G T      + G  D+        +
Sbjct: 68  ----------------------------IKSRTKEGTTLFFPLFQGGGNDITGTTELCKI 99

Query: 642 LLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQ 696
            L  GA++         ++ +       +  +++      +     S             
Sbjct: 100 FLEKGADITALYKPYKIVVFKNIFNYFVDENEMIP-----LYKLIFSQSGLQ-------- 146

Query: 697 GKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
                +  K + G TAL +           ++  Y    
Sbjct: 147 -----LLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKY 180

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 94.7 bits (236), Expect = 1e-22
 Identities = 17/139 (12%), Positives = 41/139 (29%), Gaps = 14/139 (10%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY------YELAQVLLAMHANVE 183
              +   K    L+ +G  +   T EG +L       G        EL ++ L   A++ 
Sbjct: 49  NNDEARYKISMFLINKGADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGADIT 108

Query: 184 DRGIKGECTPLMEAASSGFIEIVR-------LLINHGADVNGQSSSGNTPLMYACAGGHE 236
                     + +   + F++          +    G  +  +   G T L +       
Sbjct: 109 ALYKPY-KIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKP 167

Query: 237 AVVRVLLECGANVEDHNEN 255
             ++++ +          +
Sbjct: 168 IALKMMEDYIKKYNLKENS 186

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 91.3 bits (227), Expect = 2e-21
 Identities = 31/228 (13%), Positives = 62/228 (27%), Gaps = 68/228 (29%)

Query: 376 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL---LSLACSAGYYELAQVLLAMHAN 432
           R++  A   G  +   +L  +G    E+  +   L   L        Y+++  L+   A+
Sbjct: 8   RTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGAD 67

Query: 433 VEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKIN 492
           ++ R  +G  T        G                                        
Sbjct: 68  IKSRTKEGT-TLFFPLFQGG---------------------------------------- 86

Query: 493 AHTEETQETALTLACCGGFLDVADFLLKNGANI----ELGASTPLMEAAQEGHLE----- 543
              + T  T L               L+ GA+I    +      + +      ++     
Sbjct: 87  -GNDITGTTEL-----------CKIFLEKGADITALYKPY-KIVVFKNIFNYFVDENEMI 133

Query: 544 -LVRYLLDS-GAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 589
            L + +    G Q+  K + G TAL +           ++  Y    +
Sbjct: 134 PLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKPIALKMMEDYIKKYN 181

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 83.2 bits (206), Expect = 1e-18
 Identities = 26/195 (13%), Positives = 51/195 (26%), Gaps = 33/195 (16%)

Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKE--SALTLACYKGHLDMVRFLLSA 312
           + +  +  AA  G       L E G        +       L     +    +  FL++ 
Sbjct: 5   SEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINK 64

Query: 313 GADQEHKTDEMHTALMEASMDGH------VEVAKLLLDSGAQSVSAYARHDFFPNDKCER 366
           GAD + +T E  T        G        E+ K+ L+ GA  ++A  +           
Sbjct: 65  GADIKSRTKEGTTLFFPLFQGGGNDITGTTELCKIFLEKGAD-ITALYKPYKIV------ 117

Query: 367 PSSISYTYSRSLVQACSDGDVKTVKK-------LLTEGRSVHETTDEGESLLSLACSAGY 419
                      + +   +  V   +            G  +      G + L        
Sbjct: 118 -----------VFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQK 166

Query: 420 YELAQVLLAMHANVE 434
               +++        
Sbjct: 167 PIALKMMEDYIKKYN 181

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 71.2 bits (175), Expect = 2e-14
 Identities = 18/163 (11%), Positives = 43/163 (26%), Gaps = 34/163 (20%)

Query: 588 LDNSTMLIEAAKGGHANVVQLLL---DFPRSVHAKTQTGDTALTYACENGHTDVADLLLS 644
           +     +  AA  G       L       +    K+      L    +     ++  L++
Sbjct: 4   MSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLIN 63

Query: 645 YGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKK 699
            GA++     + +T+     +GG  ++                     +       +G  
Sbjct: 64  KGADIKSRTKEGTTLFFPLFQGGGNDITGTT-----------------ELCKIFLEKG-- 104

Query: 700 SGVHAKTQTGDTALTYACENGHTDVAD-------LLLSYGANL 735
           + + A  +     +     N   D  +       +    G  L
Sbjct: 105 ADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQL 147

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 56.2 bits (136), Expect = 3e-09
 Identities = 16/132 (12%), Positives = 36/132 (27%), Gaps = 39/132 (29%)

Query: 618 AKTQTGDTALTYACENGHTDVADLLLSYGANL----DNSTMLIEA----AKGGHANVVQL 669
           +   +    ++ A   G  +    L   G         S +L +            +   
Sbjct: 1   SNAMSEYRTVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMF 60

Query: 670 LLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVAD--- 726
           L++                         K + + ++T+ G T      + G  D+     
Sbjct: 61  LIN-------------------------KGADIKSRTKEGTTLFFPLFQGGGNDITGTTE 95

Query: 727 ---LLLSYGANL 735
              + L  GA++
Sbjct: 96  LCKIFLEKGADI 107

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis} Length = 186

 Score = 50.4 bits (121), Expect = 3e-07
 Identities = 21/194 (10%), Positives = 53/194 (27%), Gaps = 32/194 (16%)

Query: 1   SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL---LSLACSAGYYELAQVLLAMHANV 57
           ++  A   G  +   +L  +G    E+  +   L   L        Y+++  L+   A++
Sbjct: 9   TVSAAAMLGTYEDFLELFEKGYEDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADI 68

Query: 58  EDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNE 117
           + R  +G  T        G   +          E+ +         L++ A       + 
Sbjct: 69  KSRTKEGT-TLFFPLFQGGGNDIT------GTTELCKIF-------LEKGA-------DI 107

Query: 118 NPRPQNERS-LVQACSDGDVKTVKK-------LLTEGRSVHETTDEGESLLSLACSAGYY 169
               +  +  + +   +  V   +            G  +      G + L         
Sbjct: 108 TALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRCQKP 167

Query: 170 ELAQVLLAMHANVE 183
              +++        
Sbjct: 168 IALKMMEDYIKKYN 181

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  121 bits (306), Expect = 5e-33
 Identities = 46/90 (51%), Positives = 60/90 (66%)

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
            TPL  AA +G +E+V+LL+  GADVN +  +G TPL  A   GH  VV++LLE GA+V 
Sbjct: 3   RTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVN 62

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGA 280
             ++NG TPL  AA  GH+ V K+LLE GA
Sbjct: 63  AKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  109 bits (275), Expect = 7e-29
 Identities = 46/117 (39%), Positives = 58/117 (49%), Gaps = 28/117 (23%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
           TPL  AA+ GHLE+V+ LL++GA V+AK + G T L  A  NGH +V  LLL  GA+   
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD--- 60

Query: 591 STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA 647
                                    V+AK + G T L  A  NGH +V  LLL  GA
Sbjct: 61  -------------------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  105 bits (266), Expect = 1e-27
 Identities = 44/93 (47%), Positives = 57/93 (61%), Gaps = 1/93 (1%)

Query: 222 SGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
           +G TPL  A   GH  VV++LLE GA+V   ++NG TPL  AA  GH+ V K+LLE GA 
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
           +N        + L LA   GHL++V+ LL AGA
Sbjct: 61  VNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  105 bits (264), Expect = 2e-27
 Identities = 44/93 (47%), Positives = 58/93 (62%), Gaps = 1/93 (1%)

Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
           NG TPL  AA  GH+ V K+LLE GA +N   ++   + L LA   GHL++V+ LL AGA
Sbjct: 1   NGRTPLHLAARNGHLEVVKLLLEAGADVNA-KDKNGRTPLHLAARNGHLEVVKLLLEAGA 59

Query: 315 DQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           D   K     T L  A+ +GH+EV KLLL++GA
Sbjct: 60  DVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score =  102 bits (258), Expect = 2e-26
 Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 3/89 (3%)

Query: 501 TALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLELVRYLLDSGAQVHA 557
           T L LA   G L+V   LL+ GA++        TPL  AA+ GHLE+V+ LL++GA V+A
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNA 63

Query: 558 KTQTGDTALTYACENGHTDVADLLLSYGA 586
           K + G T L  A  NGH +V  LLL  GA
Sbjct: 64  KDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 93.2 bits (233), Expect = 3e-23
 Identities = 40/92 (43%), Positives = 56/92 (60%), Gaps = 1/92 (1%)

Query: 156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGAD 215
           G + L LA   G+ E+ ++LL   A+V  +   G  TPL  AA +G +E+V+LL+  GAD
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG-RTPLHLAARNGHLEVVKLLLEAGAD 60

Query: 216 VNGQSSSGNTPLMYACAGGHEAVVRVLLECGA 247
           VN +  +G TPL  A   GH  VV++LLE GA
Sbjct: 61  VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 87.0 bits (217), Expect = 5e-21
 Identities = 40/116 (34%), Positives = 51/116 (43%), Gaps = 33/116 (28%)

Query: 562 GDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQ 621
           G T L  A  NGH +V  LLL  GA+                            V+AK +
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGAD----------------------------VNAKDK 33

Query: 622 TGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLD 672
            G T L  A  NGH +V  LLL  GA++     +  T L  AA+ GH  VV+LLL+
Sbjct: 34  NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLE 89

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 85.5 bits (213), Expect = 2e-20
 Identities = 41/116 (35%), Positives = 51/116 (43%), Gaps = 30/116 (25%)

Query: 623 GDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSV 677
           G T L  A  NGH +V  LLL  GA++     +  T L  AA+ GH  VV+LLL      
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLL------ 55

Query: 678 IGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGA 733
                              G  + V+AK + G T L  A  NGH +V  LLL  GA
Sbjct: 56  -----------------EAG--ADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 64.3 bits (158), Expect = 5e-13
 Identities = 31/85 (36%), Positives = 47/85 (55%), Gaps = 1/85 (1%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           A  +G ++ VK LL  G  V+     G + L LA   G+ E+ ++LL   A+V  +   G
Sbjct: 9   AARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG 68

Query: 190 ECTPLMEAASSGFIEIVRLLINHGA 214
             TPL  AA +G +E+V+LL+  GA
Sbjct: 69  -RTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 61.6 bits (151), Expect = 5e-12
 Identities = 37/139 (26%), Positives = 51/139 (36%), Gaps = 51/139 (36%)

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA 352
            L LA   GHL++V+ LL AGAD   K     T L  A+ +GH+EV KLLL++GA     
Sbjct: 5   PLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAD---- 60

Query: 353 YARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS 412
                                                          V+     G + L 
Sbjct: 61  -----------------------------------------------VNAKDKNGRTPLH 73

Query: 413 LACSAGYYELAQVLLAMHA 431
           LA   G+ E+ ++LL   A
Sbjct: 74  LAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 48.9 bits (118), Expect = 2e-07
 Identities = 41/148 (27%), Positives = 57/148 (38%), Gaps = 58/148 (39%)

Query: 407 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYAR 466
           G + L LA   G+ E+ ++LL   A+V  +   G  TPL  AA +G      E V     
Sbjct: 2   GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG-RTPLHLAARNGHL----EVVK---- 52

Query: 467 HDFFPNDKSVNGLQASVILIP-GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI 525
                            +L+  GA +NA                          KNG   
Sbjct: 53  -----------------LLLEAGADVNAKD------------------------KNG--- 68

Query: 526 ELGASTPLMEAAQEGHLELVRYLLDSGA 553
                TPL  AA+ GHLE+V+ LL++GA
Sbjct: 69  ----RTPLHLAARNGHLEVVKLLLEAGA 92

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 44.7 bits (107), Expect = 4e-06
 Identities = 31/128 (24%), Positives = 45/128 (35%), Gaps = 52/128 (40%)

Query: 325 TALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSD 384
           T L  A+ +GH+EV KLLL++GA                                     
Sbjct: 4   TPLHLAARNGHLEVVKLLLEAGAD------------------------------------ 27

Query: 385 GDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTP 444
                          V+     G + L LA   G+ E+ ++LL   A+V  +   G  TP
Sbjct: 28  ---------------VNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG-RTP 71

Query: 445 LMEAASSG 452
           L  AA +G
Sbjct: 72  LHLAARNG 79

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1 Length = 93

 Score = 44.7 bits (107), Expect = 4e-06
 Identities = 25/72 (34%), Positives = 37/72 (51%), Gaps = 1/72 (1%)

Query: 5  ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
          A  +G ++ VK LL  G  V+     G + L LA   G+ E+ ++LL   A+V  +   G
Sbjct: 9  AARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNG 68

Query: 65 ECTPLMEAASSG 76
            TPL  AA +G
Sbjct: 69 -RTPLHLAARNG 79

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  121 bits (305), Expect = 1e-32
 Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)

Query: 197 AASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENG 256
            +S         L+  G+ +    S     L+ A   G +  VR+L+  GA+V   ++NG
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMG---SDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 257 HTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL 309
            TPL  AA  GH+ V K+LLE GA +    ++F ++A  ++   G+ D+   L
Sbjct: 58  STPLHLAARNGHLEVVKLLLEAGADVXA-QDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  113 bits (284), Expect = 6e-30
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 4/113 (3%)

Query: 163 ACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSS 222
             S  ++  +  L+   +++           L+EAA +G  + VR+L+ +GADV  +  +
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDL----GKKLLEAARAGQDDEVRILMANGADVAAKDKN 56

Query: 223 GNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
           G+TPL  A   GH  VV++LLE GA+V   ++ G T    +   G+  +A+IL
Sbjct: 57  GSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  110 bits (278), Expect = 4e-29
 Identities = 31/109 (28%), Positives = 51/109 (46%), Gaps = 5/109 (4%)

Query: 506 ACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTA 565
                    +  L+  G+++       L+EAA+ G  + VR L+ +GA V AK + G T 
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTP 60

Query: 566 LTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLL 609
           L  A  NGH +V  LLL  GA++        T    +   G+ ++ ++L
Sbjct: 61  LHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score =  104 bits (262), Expect = 6e-27
 Identities = 29/140 (20%), Positives = 48/140 (34%), Gaps = 36/140 (25%)

Query: 536 AAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLI 595
            +   H      L+  G+ + +        L  A   G  D   +L++ GA+        
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSD---LGKKLLEAARAGQDDEVRILMANGAD-------- 49

Query: 596 EAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----D 650
                               V AK + G T L  A  NGH +V  LLL  GA++      
Sbjct: 50  --------------------VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKF 89

Query: 651 NSTMLIEAAKGGHANVVQLL 670
             T    +   G+ ++ ++L
Sbjct: 90  GKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 91.5 bits (228), Expect = 3e-22
 Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 4/85 (4%)

Query: 263 AASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDE 322
            +S  H   +  L+  G+ + +         L  A   G  D VR L++ GAD   K   
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDLG----KKLLEAARAGQDDEVRILMANGADVAAKDKN 56

Query: 323 MHTALMEASMDGHVEVAKLLLDSGA 347
             T L  A+ +GH+EV KLLL++GA
Sbjct: 57  GSTPLHLAARNGHLEVVKLLLEAGA 81

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 89.2 bits (222), Expect = 1e-21
 Identities = 34/97 (35%), Positives = 53/97 (54%), Gaps = 7/97 (7%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLEL 544
           G+ + +         L  A   G  D    L+ NGA++       STPL  AA+ GHLE+
Sbjct: 17  GSHMGSDLG----KKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEV 72

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLL 581
           V+ LL++GA V A+ + G TA   + +NG+ D+A++L
Sbjct: 73  VKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 83.0 bits (206), Expect = 2e-19
 Identities = 32/113 (28%), Positives = 50/113 (44%), Gaps = 4/113 (3%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
             S         L+  G  +     +    L  A  AG  +  ++L+A  A+V  +   G
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGS---DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVL 242
             TPL  AA +G +E+V+LL+  GADV  Q   G T    +   G+E +  +L
Sbjct: 58  -STPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNEDLAEIL 109

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 80.7 bits (200), Expect = 2e-18
 Identities = 27/107 (25%), Positives = 44/107 (41%), Gaps = 27/107 (25%)

Query: 630 ACENGHTDVADLLLSYGANLDN--STMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSD 687
              + H   +  L+  G+++ +     L+EAA+ G  + V++L+                
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDLGKKLLEAARAGQDDEVRILM---------------- 44

Query: 688 DSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                  + G    V AK + G T L  A  NGH +V  LLL  GA+
Sbjct: 45  -------ANGAD--VAAKDKNGSTPLHLAARNGHLEVVKLLLEAGAD 82

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 61.4 bits (150), Expect = 8e-12
 Identities = 24/158 (15%), Positives = 44/158 (27%), Gaps = 55/158 (34%)

Query: 297 ACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARH 356
                H      L+  G+            L+EA+  G  +  ++L+ +GA         
Sbjct: 1   GSSHHHHHHSSGLVPRGSHMGSDLG---KKLLEAARAGQDDEVRILMANGAD-------- 49

Query: 357 DFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACS 416
                                                      V      G + L LA  
Sbjct: 50  -------------------------------------------VAAKDKNGSTPLHLAAR 66

Query: 417 AGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQ 454
            G+ E+ ++LL   A+V  +   G+ T    +  +G +
Sbjct: 67  NGHLEVVKLLLEAGADVXAQDKFGK-TAFDISIDNGNE 103

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A Length = 110

 Score = 40.3 bits (95), Expect = 2e-04
 Identities = 18/72 (25%), Positives = 28/72 (38%), Gaps = 4/72 (5%)

Query: 5  ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
            S         L+  G  +     +    L  A  AG  +  ++L+A  A+V  +   G
Sbjct: 1  GSSHHHHHHSSGLVPRGSHMGS---DLGKKLLEAARAGQDDEVRILMANGADVAAKDKNG 57

Query: 65 ECTPLMEAASSG 76
            TPL  AA +G
Sbjct: 58 -STPLHLAARNG 68

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  120 bits (305), Expect = 1e-32
 Identities = 42/108 (38%), Positives = 58/108 (53%), Gaps = 3/108 (2%)

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239
                   K   TPL  AA +G  E V+ L++ GADVN +S  GNTPL  A   GH  +V
Sbjct: 2   HMWGS---KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIV 58

Query: 240 RVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSN 287
           ++LL  GA+V   +++G+TP   A   GH  + K+L   GA +N  S 
Sbjct: 59  KLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSW 106

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  110 bits (277), Expect = 7e-29
 Identities = 41/131 (31%), Positives = 67/131 (51%), Gaps = 31/131 (23%)

Query: 522 GANI--ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVAD 579
           G     + G +TPL  AA+ GH E V+ LL  GA V+A+++ G+T L  A +NGH ++  
Sbjct: 1   GHMWGSKDG-NTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVK 59

Query: 580 LLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVA 639
           LLL+ GA+                            V+A+++ G+T    A +NGH ++ 
Sbjct: 60  LLLAKGAD----------------------------VNARSKDGNTPEHLAKKNGHHEIV 91

Query: 640 DLLLSYGANLD 650
            LL + GA+++
Sbjct: 92  KLLDAKGADVN 102

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  109 bits (274), Expect = 2e-28
 Identities = 36/102 (35%), Positives = 53/102 (51%), Gaps = 3/102 (2%)

Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM 305
           G       ++G+TPL  AA  GH    K LL  GA +N   ++   + L LA   GH ++
Sbjct: 1   GHMWGS--KDGNTPLHNAAKNGHAEEVKKLLSKGADVNA-RSKDGNTPLHLAAKNGHAEI 57

Query: 306 VRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           V+ LL+ GAD   ++ + +T    A  +GH E+ KLL   GA
Sbjct: 58  VKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGA 99

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  107 bits (269), Expect = 1e-27
 Identities = 34/105 (32%), Positives = 56/105 (53%), Gaps = 6/105 (5%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLEL 544
           G    +   +   T L  A   G  +    LL  GA++   +   +TPL  AA+ GH E+
Sbjct: 1   GHMWGS---KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEI 57

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 589
           V+ LL  GA V+A+++ G+T    A +NGH ++  LL + GA+++
Sbjct: 58  VKLLLAKGADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVN 102

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score =  105 bits (265), Expect = 3e-27
 Identities = 40/108 (37%), Positives = 56/108 (51%), Gaps = 1/108 (0%)

Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
           + +G + L  A   G+ E  + LL+  A+V  R   G  TPL  AA +G  EIV+LL+  
Sbjct: 6   SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDG-NTPLHLAAKNGHAEIVKLLLAK 64

Query: 213 GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPL 260
           GADVN +S  GNTP   A   GH  +V++L   GA+V   +       
Sbjct: 65  GADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 88.6 bits (221), Expect = 3e-21
 Identities = 38/117 (32%), Positives = 59/117 (50%), Gaps = 30/117 (25%)

Query: 623 GDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSV 677
           G+T L  A +NGH +    LLS GA++     D +T L  AAK GHA +V+LLL      
Sbjct: 9   GNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLL------ 62

Query: 678 IGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                            ++G  + V+A+++ G+T    A +NGH ++  LL + GA+
Sbjct: 63  -----------------AKG--ADVNARSKDGNTPEHLAKKNGHHEIVKLLDAKGAD 100

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 83.2 bits (207), Expect = 2e-19
 Identities = 37/100 (37%), Positives = 55/100 (55%), Gaps = 1/100 (1%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 189
           A  +G  + VKKLL++G  V+  + +G + L LA   G+ E+ ++LLA  A+V  R   G
Sbjct: 16  AAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDG 75

Query: 190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMY 229
             TP   A  +G  EIV+LL   GADVN +S   +    +
Sbjct: 76  -NTPEHLAKKNGHHEIVKLLDAKGADVNARSWGSSHHHHH 114

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 80.1 bits (199), Expect = 2e-18
 Identities = 25/84 (29%), Positives = 40/84 (47%), Gaps = 4/84 (4%)

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAAQEGHLEL 544
           GA +NA   +   T L LA   G  ++   LL  GA++   +   +TP   A + GH E+
Sbjct: 32  GADVNA-RSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNGHHEI 90

Query: 545 VRYLLDSGAQVHAKTQTGDTALTY 568
           V+ L   GA V+A++        +
Sbjct: 91  VKLLDAKGADVNARSWGSSHHHHH 114

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 69.3 bits (171), Expect = 1e-14
 Identities = 35/167 (20%), Positives = 57/167 (34%), Gaps = 55/167 (32%)

Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEV 338
           G       ++   + L  A   GH + V+ LLS GAD   ++ + +T L  A+ +GH E+
Sbjct: 1   GHMWG---SKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEI 57

Query: 339 AKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGR 398
            KLLL  GA                                                   
Sbjct: 58  VKLLLAKGAD-------------------------------------------------- 67

Query: 399 SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPL 445
            V+  + +G +   LA   G++E+ ++L A  A+V  R         
Sbjct: 68  -VNARSKDGNTPEHLAKKNGHHEIVKLLDAKGADVNARSWGS-SHHH 112

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 55.8 bits (136), Expect = 8e-10
 Identities = 29/92 (31%), Positives = 42/92 (45%), Gaps = 28/92 (30%)

Query: 646 GANL---DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGV 702
           G      D +T L  AAK GHA  V+ LL                       S+G    V
Sbjct: 1   GHMWGSKDGNTPLHNAAKNGHAEEVKKLL-----------------------SKGAD--V 35

Query: 703 HAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
           +A+++ G+T L  A +NGH ++  LLL+ GA+
Sbjct: 36  NARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 45.4 bits (109), Expect = 3e-06
 Identities = 30/140 (21%), Positives = 45/140 (32%), Gaps = 54/140 (38%)

Query: 313 GADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISY 372
           G      + + +T L  A+ +GH E  K LL  GA                         
Sbjct: 1   GHMW--GSKDGNTPLHNAAKNGHAEEVKKLLSKGAD------------------------ 34

Query: 373 TYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 432
                                      V+  + +G + L LA   G+ E+ ++LLA  A+
Sbjct: 35  ---------------------------VNARSKDGNTPLHLAAKNGHAEIVKLLLAKGAD 67

Query: 433 VEDRGIKGECTPLMEAASSG 452
           V  R   G  TP   A  +G
Sbjct: 68  VNARSKDG-NTPEHLAKKNG 86

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli} Length = 115

 Score = 44.7 bits (107), Expect = 6e-06
 Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 1/72 (1%)

Query: 5  ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG 64
          A  +G  + VKKLL++G  V+  + +G + L LA   G+ E+ ++LLA  A+V  R   G
Sbjct: 16 AAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDG 75

Query: 65 ECTPLMEAASSG 76
            TP   A  +G
Sbjct: 76 -NTPEHLAKKNG 86

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  125 bits (315), Expect = 3e-32
 Identities = 50/271 (18%), Positives = 90/271 (33%), Gaps = 58/271 (21%)

Query: 116 NENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHE--------TTDEGESLLSLA---C 164
            + PR  + RS+  A +  + + ++ LL   +   +          + G++ L  A    
Sbjct: 6   EKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNL 65

Query: 165 SAGYYELAQVLLA-----------MHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG 213
             G  +   +LL            ++A+  D   KG+ T L  A     + +V LL+ +G
Sbjct: 66  HNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQ-TALHIAIERRNMTLVTLLVENG 124

Query: 214 ADVNGQSSS--------------GNTPLMYACAGGHEAVVRVLLECG---ANVEDHNENG 256
           ADV   ++               G  PL  A      A+V+ LL+     A++   +  G
Sbjct: 125 ADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVG 184

Query: 257 HTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQ 316
           +T L                          N    +    + Y   L +   L      +
Sbjct: 185 NTVLHALVEVAD------------------NTVDNTKFVTSMYNEILILGAKLHPTLKLE 226

Query: 317 EHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           E    +  T L  A+  G + V   +L    
Sbjct: 227 EITNRKGLTPLALAASSGKIGVLAYILQREI 257

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  117 bits (296), Expect = 9e-30
 Identities = 47/296 (15%), Positives = 91/296 (30%), Gaps = 52/296 (17%)

Query: 397 GRSVHETTDEGESLLSLACSAGYYELAQVLLAM-------HANVEDRGIKGECTPLMEAA 449
                         +  A +    +  + LL           + E +  +   T L++A 
Sbjct: 3   SAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAM 62

Query: 450 SSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCG 509
            +      N++++           +  + L+  V     A     +    +TAL +A   
Sbjct: 63  LNL-HNGQNDTIALLLDVA-----RKTDSLKQFV----NASYTD-SYYKGQTALHIAIER 111

Query: 510 GFLDVADFLLKNGANIELGA-----------------STPLMEAAQEGHLELVRYLLDSG 552
             + +   L++NGA+++  A                   PL  AA    L +V++LL + 
Sbjct: 112 RNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNS 171

Query: 553 ---AQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLL 609
              A + A+   G+T L    E     V             +T  + +       +   L
Sbjct: 172 WQPADISARDSVGNTVLHALVEVADNTVD------------NTKFVTSMYNEILILGAKL 219

Query: 610 LDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHAN 665
               +      + G T L  A  +G   V   +L    +         AA   H +
Sbjct: 220 HPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH--EPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  116 bits (293), Expect = 2e-29
 Identities = 41/256 (16%), Positives = 67/256 (26%), Gaps = 49/256 (19%)

Query: 505 LACCGGFLDVADFLLKNGANIELGAS----TPLMEA---AQEGHLELVRYLLDSGAQVHA 557
                  L       K   + E        T L++A      G  + +  LLD   +  +
Sbjct: 26  CQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDS 85

Query: 558 -----------KTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVV 606
                          G TAL  A E  +  +  LL+  GA++        AA G      
Sbjct: 86  LKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQ------AAANGD----- 134

Query: 607 QLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGA--------NLDNSTMLIEA 658
                           G+  L+ A       +   LL            +   +T+L   
Sbjct: 135 ---FFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHAL 191

Query: 659 AKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACE 718
            +     V              S+ +      + L    K        + G T L  A  
Sbjct: 192 VEVADNTVDNTKFVT-------SMYNEILILGAKLHPTLKL--EEITNRKGLTPLALAAS 242

Query: 719 NGHTDVADLLLSYGAN 734
           +G   V   +L    +
Sbjct: 243 SGKIGVLAYILQREIH 258

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  113 bits (284), Expect = 4e-28
 Identities = 45/220 (20%), Positives = 73/220 (33%), Gaps = 51/220 (23%)

Query: 128 VQACSDGDVKTVKKLLTEGR-----------SVHETTDEGESLLSLACSAGYYELAQVLL 176
           +    +G   T+  LL   R           S  ++  +G++ L +A       L  +L+
Sbjct: 62  MLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLV 121

Query: 177 AMHANVEDRGIKGE-------------CTPLMEAASSGFIEIVRLLINHG---ADVNGQS 220
              A+V+                      PL  AA +  + IV+ L+ +    AD++ + 
Sbjct: 122 ENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARD 181

Query: 221 SSGNTPLMYACAGGHEAVVRV---------LLECGANVEDH-------NENGHTPLMEAA 264
           S GNT L          V            +L  GA +          N  G TPL  AA
Sbjct: 182 SVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAA 241

Query: 265 SAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD 304
           S+G +GV   +L+                   A +  H  
Sbjct: 242 SSGKIGVLAYILQREIHEPE--------CRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  107 bits (270), Expect = 3e-26
 Identities = 47/310 (15%), Positives = 90/310 (29%), Gaps = 74/310 (23%)

Query: 177 AMHANVEDRGIKGECTPLMEAASSG-------FIEIVRLLINHGADVNGQ-SSSGNTPLM 228
           ++ A  +   +      + +A +          +  ++       D   +   +G T L+
Sbjct: 1   SVSAGEKPPRLYDR-RSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLL 59

Query: 229 YACA---GGHEAVVRVLLECGANVE-----------DHNENGHTPLMEAASAGHVGVAKI 274
            A      G    + +LL+     +           D    G T L  A    ++ +  +
Sbjct: 60  KAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTL 119

Query: 275 LLEYGAGINTHSNE--FKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASM 332
           L+E GA +   +N   FK++      Y G                         L  A+ 
Sbjct: 120 LVENGADVQAAANGDFFKKTKGRPGFYFGE----------------------LPLSLAAC 157

Query: 333 DGHVEVAKLLLDSGAQSVSAYARHDF----------FPNDKCERPSSISYTYSRSLVQAC 382
              + + K LL +  Q     AR               ++  +             V + 
Sbjct: 158 TNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNT---------KFVTSM 208

Query: 383 SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGEC 442
            +  +    KL    +    T  +G + L+LA S+G   +   +L        R I    
Sbjct: 209 YNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYIL-------QREIHEP- 260

Query: 443 TPLMEAASSG 452
                AA   
Sbjct: 261 ECRHAAAHHH 270

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score =  107 bits (269), Expect = 4e-26
 Identities = 51/337 (15%), Positives = 80/337 (23%), Gaps = 105/337 (31%)

Query: 428 AMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP 487
           ++ A  +   +      + +A +      L   +       F    K             
Sbjct: 1   SVSAGEKPPRLYDR-RSIFDAVAQSNCQELESLL------PFLQRSKKR----------- 42

Query: 488 GAKINAHTEETQETALTLACC---GGFLDVADFLLKNGANIELGA--------------S 530
                    ET +T L  A      G  D    LL      +                  
Sbjct: 43  LTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQ 102

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
           T L  A +  ++ LV  L+++GA V A         T      +         +G     
Sbjct: 103 TALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFY---------FG----- 148

Query: 591 STMLIEAAKGGHANVVQLLLDFPRS---VHAKTQTGDTALTYACENGHTDVA-------- 639
              L  AA      +V+ LL        + A+   G+T L    E     V         
Sbjct: 149 ELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSM 208

Query: 640 -DLLLSYGANL------------DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPS 686
            + +L  GA L               T L  AA  G   V+  +L               
Sbjct: 209 YNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYIL--------------- 253

Query: 687 DDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTD 723
                    +                   A  + H  
Sbjct: 254 --------QREIH---------EPECRHAAAHHHHHH 273

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A* Length = 273

 Score = 66.7 bits (163), Expect = 3e-12
 Identities = 38/280 (13%), Positives = 69/280 (24%), Gaps = 84/280 (30%)

Query: 3   VQACSDGDVKTVKKLLTEGR-----------SVHETTDEGESLLSLACSAGYYELAQVLL 51
           +    +G   T+  LL   R           S  ++  +G++ L +A       L  +L+
Sbjct: 62  MLNLHNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLV 121

Query: 52  AMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAAL 111
              A+V+                  FG+L                               
Sbjct: 122 ENGADVQAAANGDFFKKTKGRPGFYFGELP------------------------------ 151

Query: 112 TRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRS---VHETTDEGESLLSLACSAGY 168
                          L  A     +  VK LL        +      G ++L        
Sbjct: 152 ---------------LSLAACTNQLAIVKFLLQNSWQPADISARDSVGNTVLHALVEVA- 195

Query: 169 YELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLM 228
                        V++       T  + +  +  + +   L          +  G TPL 
Sbjct: 196 ----------DNTVDN-------TKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLA 238

Query: 229 YACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH 268
            A + G   V+  +L+          +       AA   H
Sbjct: 239 LAASSGKIGVLAYILQREI-------HEPECRHAAAHHHH 271

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  120 bits (303), Expect = 1e-30
 Identities = 49/259 (18%), Positives = 81/259 (31%), Gaps = 55/259 (21%)

Query: 120 RPQNERSLVQACSDGDVKT----VKKLLTEGRSVHET----TDEGESLLSLA---CSAGY 168
           +  N   L    S G        +  LLT  + + +        G++ L  A    SAG 
Sbjct: 2   KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGR 61

Query: 169 YELAQVLLA-----------MHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVN 217
            +   +LL            +++   D   +G+ T L  A        V LL+  GADV+
Sbjct: 62  NDTIPILLDIAEKTGNMREFINSPFRDVYYRGQ-TALHIAIERRCKHYVELLVEKGADVH 120

Query: 218 --------------GQSSSGNTPLMYACAGGHEAVVRVLLECG---ANVEDHNENGHTPL 260
                         G    G  PL  A       +V  L E G   A++   +  G+T L
Sbjct: 121 AQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVL 180

Query: 261 MEAASAGH---------VGVAKILLEYGAGINTHS------NEFKESALTLACYKGHLDM 305
               +              +  +LL   A +   +      N    S L +A   G + +
Sbjct: 181 HALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGI 240

Query: 306 VRFLLSAGADQEHKTDEMH 324
            + ++             H
Sbjct: 241 FQHIIRREIADAAAHHHHH 259

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  110 bits (277), Expect = 3e-27
 Identities = 40/264 (15%), Positives = 68/264 (25%), Gaps = 54/264 (20%)

Query: 501 TALTLACCGGFLDVADFLLKNGANI--------ELGASTPLMEAA---QEGHLELVRYLL 549
             ++     G   +  FLL +   +          G  T L +A      G  + +  LL
Sbjct: 11  DIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTG-KTCLPKALLNLSAGRNDTIPILL 69

Query: 550 DSG-----------AQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAA 598
           D             +        G TAL  A E       +LL+  GA++         A
Sbjct: 70  DIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVH------AQA 123

Query: 599 KGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG---ANLDNS--- 652
           +G            P+        G+  L+ A       +   L   G   A+L      
Sbjct: 124 RGRFFQ--------PKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSR 175

Query: 653 --TMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGD 710
             T+L                 F   +    L   +             +        G 
Sbjct: 176 GNTVLHALVAIADNTRENT--KFVTKMYDLLLIKCAKLFP-------DTNLEALLNNDGL 226

Query: 711 TALTYACENGHTDVADLLLSYGAN 734
           + L  A + G   +   ++     
Sbjct: 227 SPLMMAAKTGKIGIFQHIIRREIA 250

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score =  108 bits (271), Expect = 2e-26
 Identities = 43/248 (17%), Positives = 71/248 (28%), Gaps = 53/248 (21%)

Query: 160 LSLACSAGYYELAQVLLAMHANVEDRGIKGE---CTPLMEAA---SSGFIEIVRLLINHG 213
           +S     G   L   LL     + D   +      T L +A    S+G  + + +L++  
Sbjct: 13  VSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIA 72

Query: 214 AD-----------VNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV------------- 249
                               G T L  A     +  V +L+E GA+V             
Sbjct: 73  EKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKD 132

Query: 250 -EDHNENGHTPLMEAASAGHVGVAKILLEYG---AGINTHSNEFKESALTLACYKGH--- 302
              +   G  PL  AA      +   L E G   A +    +    + L           
Sbjct: 133 EGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRR-QDSRGNTVLHALVAIADNTR 191

Query: 303 ------LDMVRFLLSAGADQEHKTDEMH-------TALMEASMDGHVEVAKLLLDSGAQS 349
                   M   LL   A     T+          + LM A+  G + + + ++      
Sbjct: 192 ENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251

Query: 350 VSAYARHD 357
            +  A H 
Sbjct: 252 AA--AHHH 257

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 99.9 bits (249), Expect = 1e-23
 Identities = 34/223 (15%), Positives = 55/223 (24%), Gaps = 58/223 (26%)

Query: 488 GAKINAHTEETQ---ETALTLA---CCGGFLDVADFLLKNGANIELGAS----------- 530
             ++           +T L  A      G  D    LL                      
Sbjct: 32  KKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYY 91

Query: 531 ---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQT--------------GDTALTYACENG 573
              T L  A +      V  L++ GA VHA+ +               G+  L+ A    
Sbjct: 92  RGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTN 151

Query: 574 HTDVADLLLSYG---ANLDNS-----TMLIEAAKGGH---------ANVVQLLLDFPRSV 616
              +   L   G   A+L        T+L                   +  LLL     +
Sbjct: 152 QPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKL 211

Query: 617 HAKTQT-------GDTALTYACENGHTDVADLLLSYGANLDNS 652
              T         G + L  A + G   +   ++        +
Sbjct: 212 FPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAAA 254

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 99.1 bits (247), Expect = 3e-23
 Identities = 45/284 (15%), Positives = 78/284 (27%), Gaps = 77/284 (27%)

Query: 192 TPLMEAASSG----FIEIVRLLINHGADVN----GQSSSGNTPLMYA---CAGGHEAVVR 240
             L +  S G       ++  L+ H   +      + S+G T L  A    + G    + 
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIP 66

Query: 241 VLLECG-----------ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSN-- 287
           +LL+             +   D    G T L  A         ++L+E GA ++  +   
Sbjct: 67  ILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGR 126

Query: 288 -----------EFKESALTLACYKGHLDMVRFLLSAG---ADQEHKTDEMHTALMEASM- 332
                       F E  L+LA       +V +L   G   AD   +    +T L      
Sbjct: 127 FFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAI 186

Query: 333 -DGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVK 391
            D   E  K +       +   A+     N +                            
Sbjct: 187 ADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALL------------------------- 221

Query: 392 KLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 435
                        ++G S L +A   G   + Q ++        
Sbjct: 222 ------------NNDGLSPLMMAAKTGKIGIFQHIIRREIADAA 253

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 89.8 bits (223), Expect = 4e-20
 Identities = 44/245 (17%), Positives = 63/245 (25%), Gaps = 80/245 (32%)

Query: 531 TPLMEAA----QEGHLELVRYLLDSGAQVHAK----TQTGDTALTYACEN---GHTDVAD 579
             L +       +G   L+ +LL    ++  +      TG T L  A  N   G  D   
Sbjct: 7   PILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIP 66

Query: 580 LLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVA 639
           +LL       N    I +                         G TAL  A E       
Sbjct: 67  ILLDIAEKTGNMREFINS-----------------PFRDVYYRGQTALHIAIERRCKHYV 109

Query: 640 DLLLSYGANL-------------------DNSTMLIEAAKGGHANVVQLLLDFPRSVIGG 680
           +LL+  GA++                        L  AA     ++V  L          
Sbjct: 110 ELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLT--------- 160

Query: 681 SLSSPSDDSSSHLCSQGKKSG-VHAKTQTGDTALTYACENGH---------TDVADLLLS 730
                           G K   +  +   G+T L                 T + DLLL 
Sbjct: 161 --------------ENGHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLI 206

Query: 731 YGANL 735
             A L
Sbjct: 207 KCAKL 211

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 87.1 bits (216), Expect = 3e-19
 Identities = 41/329 (12%), Positives = 80/329 (24%), Gaps = 114/329 (34%)

Query: 292 SALTLACYKGHLDMVRFLLSAGA---DQEHKTDEM-HTALMEASM---DGHVEVAKLLLD 344
             ++     G   ++ FLL+      D+E +      T L +A +    G  +   +LLD
Sbjct: 11  DIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLD 70

Query: 345 SGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETT 404
              ++ +     +    D                                          
Sbjct: 71  IAEKTGNMREFINSPFRDVY---------------------------------------- 90

Query: 405 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAY 464
             G++ L +A         ++L+   A+V                        +      
Sbjct: 91  YRGQTALHIAIERRCKHYVELLVEKGADV------------------------HAQARGR 126

Query: 465 ARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNG-- 522
                        G                     E  L+LA C     +  +L +NG  
Sbjct: 127 FFQPKDEGGYFYFG---------------------ELPLSLAACTNQPHIVHYLTENGHK 165

Query: 523 -ANIELGAS---TPLMEAAQEGH---------LELVRYLLDSGAQVHAKTQT-------G 562
            A++    S   T L                  ++   LL   A++   T         G
Sbjct: 166 QADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDG 225

Query: 563 DTALTYACENGHTDVADLLLSYGANLDNS 591
            + L  A + G   +   ++        +
Sbjct: 226 LSPLMMAAKTGKIGIFQHIIRREIADAAA 254

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 79.4 bits (196), Expect = 1e-16
 Identities = 44/262 (16%), Positives = 75/262 (28%), Gaps = 54/262 (20%)

Query: 35  LSLACSAGYYELAQVLLAMHANVEDRGIKGE---CTPLMEAASSGFGKLATGDGKLADPE 91
           +S     G   L   LL     + D   +      T L +A       L    G+     
Sbjct: 13  VSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKAL------LNLSAGRNDTIP 66

Query: 92  VLRRLTSSVSCALDEAAAALTRMRNENPRPQNER---SLVQACSDGDVKTVKKLLTEGRS 148
           +L          + E    +    N   R    R   +L  A        V+ L+ +G  
Sbjct: 67  IL--------LDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGAD 118

Query: 149 VHETTD--------------EGESLLSLACSAGYYELAQVLL---AMHANVEDRGIKGEC 191
           VH                   GE  LSLA       +   L       A++  +  +G  
Sbjct: 119 VHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRG-N 177

Query: 192 TPLMEAASSG---------FIEIVRLLINHGADVNGQSSS-------GNTPLMYACAGGH 235
           T L    +             ++  LL+   A +   ++        G +PLM A   G 
Sbjct: 178 TVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGK 237

Query: 236 EAVVRVLLECGANVEDHNENGH 257
             + + ++         + + H
Sbjct: 238 IGIFQHIIRREIADAAAHHHHH 259

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A Length = 260

 Score = 47.1 bits (112), Expect = 8e-06
 Identities = 35/241 (14%), Positives = 58/241 (24%), Gaps = 74/241 (30%)

Query: 6   CSDGDVKTVKKLLTEGR-----------SVHETTDEGESLLSLACSAGYYELAQVLLAMH 54
            S G   T+  LL                  +    G++ L +A         ++L+   
Sbjct: 57  LSAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCKHYVELLVEKG 116

Query: 55  ANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRM 114
           A+V  +       P  E     FG+L                                  
Sbjct: 117 ADVHAQARGRFFQPKDEGGYFYFGELP--------------------------------- 143

Query: 115 RNENPRPQNERSLVQACSDGDVKTVKKLLTEGRS---VHETTDEGESLLSLACSAG---- 167
                       L  A        V  L   G     +      G ++L    +      
Sbjct: 144 ------------LSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAIADNTR 191

Query: 168 -----YYELAQVLLAMHANVEDRGIKGEC------TPLMEAASSGFIEIVRLLINHGADV 216
                  ++  +LL   A +               +PLM AA +G I I + +I      
Sbjct: 192 ENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIAD 251

Query: 217 N 217
            
Sbjct: 252 A 252

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  116 bits (291), Expect = 1e-28
 Identities = 53/339 (15%), Positives = 104/339 (30%), Gaps = 40/339 (11%)

Query: 115 RNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQV 174
           R   P       L        +K +K L +   + +E   + E+ L         E+   
Sbjct: 22  RTAGPIITFTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTS 81

Query: 175 LLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS-SSGNTPLMYACAG 233
           L    +N    G          +  S   E+     N   ++N      GNTPL +  + 
Sbjct: 82  LNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSI 141

Query: 234 GHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH---VGVAKILLEYGAGINTHSNEFK 290
            +  +V+ L++ G+N    +  G + L++A  + +    G  + LL+Y        +   
Sbjct: 142 ANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMN 201

Query: 291 ESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSV 350
            + L                             H  ++ + M G    AK  LD     +
Sbjct: 202 RTIL-----------------------------HHIIITSGMTGCSAAAKYYLDILMGWI 232

Query: 351 SAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL 410
                     N   +  ++   +          D  ++ +         ++     G++ 
Sbjct: 233 VKKQ------NRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTC 286

Query: 411 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA 449
           L++A   G   +   LL   A+       G   P+   A
Sbjct: 287 LNIAARLGNISIVDALLDYGADPFIANKSGL-RPVDFGA 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score =  112 bits (281), Expect = 2e-27
 Identities = 34/263 (12%), Positives = 75/263 (28%), Gaps = 26/263 (9%)

Query: 111 LTRMRNENPRPQNE-----RSLVQACSDGDVKTVKKLL--TEGRSVHETTDEGESLLSLA 163
           + +         NE      + +Q     +++ +   L         E     +    ++
Sbjct: 45  IMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVS 104

Query: 164 CSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSG 223
             +   E+         N+     +   TPL    S   +E+V+ L+ HG++     + G
Sbjct: 105 FDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMG 164

Query: 224 NTPLMYACAGGH----EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVG--------- 270
            + L+ A    +         +L      +   +    T L        +          
Sbjct: 165 ESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYY 224

Query: 271 ---VAKILLEYGAGINTHSNEFKESALTLACYKGHL---DMVRFLLSAGADQEHKTDEMH 324
              +   +++            KES       +      + +            +     
Sbjct: 225 LDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGD 284

Query: 325 TALMEASMDGHVEVAKLLLDSGA 347
           T L  A+  G++ +   LLD GA
Sbjct: 285 TCLNIAARLGNISIVDALLDYGA 307

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 99.3 bits (247), Expect = 7e-23
 Identities = 40/281 (14%), Positives = 86/281 (30%), Gaps = 36/281 (12%)

Query: 458 NESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADF 517
              + A+ +   FP  + +     +      +  N+    + +    ++      +V D 
Sbjct: 60  KMKLEAFLQRLLFPEIQEMPTSLNND----SSNRNSEGGSSNQQQQHVSFDSLLQEVNDA 115

Query: 518 LLKNGANIELGA----STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
                 N+ +      +TPL       +LELV++L+  G+        G++ L  A ++ 
Sbjct: 116 FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSV 175

Query: 574 HTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACEN 633
           +            N D+ T            ++  L      +  +     T L +    
Sbjct: 176 N------------NYDSGTF---------EALLDYLYP---CLILEDSMNRTILHHIIIT 211

Query: 634 GHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHL 693
                      Y        ++    K  +  +     +        +         +  
Sbjct: 212 SGMTGCSAAAKYYL----DILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD 267

Query: 694 CSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 734
                 + ++A+   GDT L  A   G+  + D LL YGA+
Sbjct: 268 LKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGAD 308

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 97.0 bits (241), Expect = 5e-22
 Identities = 54/319 (16%), Positives = 94/319 (29%), Gaps = 52/319 (16%)

Query: 360 PNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY 419
             D  +R +    T++  L        +K +K L +   + +E   + E+ L        
Sbjct: 16  GTDDNDRTAGPIITFTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAFLQRLLFPEI 75

Query: 420 YELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGL 479
            E+   L    +N    G          +  S     L E        D FPN       
Sbjct: 76  QEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDS----LLQEVN------DAFPN------- 118

Query: 480 QASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEA 536
                      +N   +E   T L        L++   L+K+G+N   G +   + L++A
Sbjct: 119 -------TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKA 171

Query: 537 AQEGH---LELVRYLLDS-GAQVHAKTQTGDTALTYACENGHTD------------VADL 580
            +  +         LLD     +  +     T L +                    +   
Sbjct: 172 VKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGW 231

Query: 581 LLSYGANLDNS---------TMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYAC 631
           ++        S                K      + L       ++A+   GDT L  A 
Sbjct: 232 IVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAA 291

Query: 632 ENGHTDVADLLLSYGANLD 650
             G+  + D LL YGA+  
Sbjct: 292 RLGNISIVDALLDYGADPF 310

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 94.3 bits (234), Expect = 4e-21
 Identities = 37/259 (14%), Positives = 73/259 (28%), Gaps = 21/259 (8%)

Query: 92  VLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHE 151
            L+RL       +  +    +  RN      N++    +      +          +++ 
Sbjct: 66  FLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNI 125

Query: 152 TTD-EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG----FIEIV 206
             D  G + L    S    EL + L+   +N       GE + L++A  S          
Sbjct: 126 PVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGE-SCLVKAVKSVNNYDSGTFE 184

Query: 207 RLLINHGADVNGQSSSGNTPLMYACA------------GGHEAVVRVLLECGANVEDHNE 254
            LL      +  + S   T L +                  + ++  +++          
Sbjct: 185 ALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGT 244

Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNE---FKESALTLACYKGHLDMVRFLLS 311
           N         +          L+    I    N      ++ L +A   G++ +V  LL 
Sbjct: 245 NEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLD 304

Query: 312 AGADQEHKTDEMHTALMEA 330
            GAD           +   
Sbjct: 305 YGADPFIANKSGLRPVDFG 323

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 92.8 bits (230), Expect = 1e-20
 Identities = 43/386 (11%), Positives = 87/386 (22%), Gaps = 90/386 (23%)

Query: 211 NHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV-----------EDHNENGHTP 259
               D     +  N             +    L     +            +        
Sbjct: 7   GPSGDNENNGTDDNDRTAGPIITFTHDLTSDFLSSPLKIMKALPSPVVNDNEQKMKLEAF 66

Query: 260 LMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHK 319
           L          +   L    +  N+      +    ++      ++     +   +    
Sbjct: 67  LQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIP 126

Query: 320 TDEM-HTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSL 378
            DE  +T L   +   ++E+ K L+  G+                               
Sbjct: 127 VDEHGNTPLHWLTSIANLELVKHLVKHGS------------------------------- 155

Query: 379 VQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG----YYELAQVLLAMHANVE 434
                               +     + GES L  A  +           +L  ++  + 
Sbjct: 156 --------------------NRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLI 195

Query: 435 DRGIKGECTPLMEAASSGRQCNLNESVSAY--------ARHDFFPNDKSVNGLQASVILI 486
                   T L     +      + +   Y         +    P     N  ++     
Sbjct: 196 LEDSMN-RTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPN-- 252

Query: 487 PGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVR 546
              K     +   E           L+  D    NG        T L  AA+ G++ +V 
Sbjct: 253 --DKNGERKDSILENLDLKWIIANMLNAQD---SNG-------DTCLNIAARLGNISIVD 300

Query: 547 YLLDSGAQVHAKTQTGDTALTYACEN 572
            LLD GA      ++G   + +    
Sbjct: 301 ALLDYGADPFIANKSGLRPVDFGAGL 326

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 81.2 bits (200), Expect = 1e-16
 Identities = 39/241 (16%), Positives = 71/241 (29%), Gaps = 50/241 (20%)

Query: 29  DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLA 88
           + G + L    S    EL + L+   +N       GE + L++A  S             
Sbjct: 129 EHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGE-SCLVKAVKSVNNY-----DSGT 182

Query: 89  DPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRS 148
              +L  L   +               +                              R+
Sbjct: 183 FEALLDYLYPCLIL------------EDSM---------------------------NRT 203

Query: 149 V-HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG----FI 203
           + H            A +  Y ++    +    N   +    E        +       +
Sbjct: 204 ILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSIL 263

Query: 204 EIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEA 263
           E + L       +N Q S+G+T L  A   G+ ++V  LL+ GA+    N++G  P+   
Sbjct: 264 ENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323

Query: 264 A 264
           A
Sbjct: 324 A 324

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1 Length = 327

 Score = 68.1 bits (166), Expect = 2e-12
 Identities = 31/230 (13%), Positives = 61/230 (26%), Gaps = 48/230 (20%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAG----YYELAQVLLAMHANVEDR 60
             S  +++ VK L+  G +     + GES L  A  +           +L  ++  +   
Sbjct: 138 LTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE 197

Query: 61  GIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPR 120
                 T L     +         G        +     +   + +      +       
Sbjct: 198 DSMN-RTILHHIIITS--------GMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKE 248

Query: 121 PQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 180
                                                +  +        E   +   +  
Sbjct: 249 S----------------------------------KPNDKNGERKDSILENLDLKWIIAN 274

Query: 181 NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYA 230
            +  +   G+ T L  AA  G I IV  L+++GAD    + SG  P+ + 
Sbjct: 275 MLNAQDSNGD-TCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 323

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 78.9 bits (194), Expect = 2e-16
 Identities = 29/101 (28%), Positives = 50/101 (49%), Gaps = 4/101 (3%)

Query: 191 CTPLMEAASSG---FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA 247
            T L  A  S     + IV  L+ +  +++ Q+  G+T L Y C   +   +++LL   A
Sbjct: 170 ETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKA 229

Query: 248 NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG-INTHSN 287
           ++E  NE+G TPL  A    H    ++L +  +G  N+H +
Sbjct: 230 SIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVH 270

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 75.4 bits (185), Expect = 4e-15
 Identities = 30/132 (22%), Positives = 48/132 (36%), Gaps = 11/132 (8%)

Query: 467 HDFFPNDKSVNGLQASVILIPGAKIN-----AHTEETQETALTLACCGG---FLDVADFL 518
           H      K+ +          G  +      A+  E  ETAL LA        L + DFL
Sbjct: 132 HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 191

Query: 519 LKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHT 575
           ++N  N++       T L       + E ++ LL   A +    ++G+T L  A    H 
Sbjct: 192 VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 251

Query: 576 DVADLLLSYGAN 587
              +LL    + 
Sbjct: 252 HCEELLTQALSG 263

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 73.9 bits (181), Expect = 1e-14
 Identities = 28/155 (18%), Positives = 55/155 (35%), Gaps = 10/155 (6%)

Query: 114 MRNENPRPQNERSLVQACSDGDVKTVKKLLTEG------RSVHETTDEGESLLSLACSAG 167
            +          SL +A    D+  + +   +G        +    +  E+ L LA  + 
Sbjct: 121 RKKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSV 180

Query: 168 ---YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGN 224
                 +   L+    N++ +  KG  T L     +   E ++LL+   A +   + SG 
Sbjct: 181 DRTSLHIVDFLVQNSGNLDKQTGKG-STALHYCCLTDNAECLKLLLRGKASIEIANESGE 239

Query: 225 TPLMYACAGGHEAVVRVLLECGANVEDHNENGHTP 259
           TPL  A    HE    +L +  +   + + +    
Sbjct: 240 TPLDIAKRLKHEHCEELLTQALSGRFNSHVHVEYE 274

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 66.9 bits (163), Expect = 3e-12
 Identities = 23/122 (18%), Positives = 40/122 (32%), Gaps = 31/122 (25%)

Query: 530 STPL---MEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA 586
            T L   + +     L +V +L+ +   +  +T  G TAL Y C   + +   LLL   A
Sbjct: 170 ETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKA 229

Query: 587 NLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
           +                            +    ++G+T L  A    H    +LL    
Sbjct: 230 S----------------------------IEIANESGETPLDIAKRLKHEHCEELLTQAL 261

Query: 647 AN 648
           + 
Sbjct: 262 SG 263

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 58.1 bits (140), Expect = 2e-09
 Identities = 23/130 (17%), Positives = 47/130 (36%), Gaps = 8/130 (6%)

Query: 550 DSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNST---MLIEAAKGGHANVV 606
                +    +T D            D+ + +     +  + T   + + +      ++V
Sbjct: 129 AKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIV 188

Query: 607 QLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKG 661
             L+    ++  +T  G TAL Y C   + +   LLL   A+++       T L  A + 
Sbjct: 189 DFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRL 248

Query: 662 GHANVVQLLL 671
            H +  +LL 
Sbjct: 249 KHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 57.7 bits (139), Expect = 3e-09
 Identities = 24/140 (17%), Positives = 45/140 (32%), Gaps = 13/140 (9%)

Query: 216 VNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNE---------NGHTPLMEAASA 266
              + +     L   C       +  LL+  A+  D  E            T L  A  +
Sbjct: 120 ARKKHADTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRS 179

Query: 267 G---HVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEM 323
                + +   L++    ++  + +   +AL   C   + + ++ LL   A  E   +  
Sbjct: 180 VDRTSLHIVDFLVQNSGNLDKQTGK-GSTALHYCCLTDNAECLKLLLRGKASIEIANESG 238

Query: 324 HTALMEASMDGHVEVAKLLL 343
            T L  A    H    +LL 
Sbjct: 239 ETPLDIAKRLKHEHCEELLT 258

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1 Length = 278

 Score = 49.2 bits (117), Expect = 2e-06
 Identities = 20/67 (29%), Positives = 32/67 (47%), Gaps = 3/67 (4%)

Query: 284 THSNEFKESALTLAC---YKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAK 340
            + +E  E+AL LA     +  L +V FL+    + + +T +  TAL    +  + E  K
Sbjct: 163 ANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLK 222

Query: 341 LLLDSGA 347
           LLL   A
Sbjct: 223 LLLRGKA 229

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 77.1 bits (189), Expect = 3e-15
 Identities = 31/129 (24%), Positives = 54/129 (41%), Gaps = 1/129 (0%)

Query: 150 HETTDEGESLLSLACSAGYYELAQVLLAMHANV-EDRGIKGECTPLMEAASSGFIEIVRL 208
             +   G  L   +            LA  A+V    G +   TPL++A ++  +     
Sbjct: 194 LGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEF 253

Query: 209 LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH 268
           L+ +GA+VN   S+G  PL +A   GH  +  + L+ GA++   +  G  PL  A    +
Sbjct: 254 LLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETAN 313

Query: 269 VGVAKILLE 277
             +  +L  
Sbjct: 314 ADIVTLLRL 322

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 74.4 bits (182), Expect = 2e-14
 Identities = 39/148 (26%), Positives = 54/148 (36%), Gaps = 7/148 (4%)

Query: 485 LIPGAKIN-AHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEG 540
           L  GA +N  +  +   T L  A     L   +FLL+NGAN+    S    PL  A   G
Sbjct: 220 LAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILG 279

Query: 541 HLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLL---SYGANLDNSTMLIEA 597
           H  L    L  GA + A+   G   LT A E  + D+  LL       A         E 
Sbjct: 280 HTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDET 339

Query: 598 AKGGHANVVQLLLDFPRSVHAKTQTGDT 625
                 +   +  D P  +  ++    T
Sbjct: 340 YLDIFRDFSLMASDDPEKLSRRSHDLHT 367

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 73.7 bits (180), Expect = 4e-14
 Identities = 39/154 (25%), Positives = 60/154 (38%), Gaps = 5/154 (3%)

Query: 194 LMEAASSGFIEIVRLLINHGADVNGQSSS--GNTPLMYACAGGHEAVVRVLLECGANVED 251
              +     +  +   + HGADVN  +      TPL+ A A         LL+ GANV  
Sbjct: 204 FRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQ 263

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
            +  G  PL  A   GH G+A + L+ GA +    +      LT+A    + D+V  L  
Sbjct: 264 ADSAGRGPLHHATILGHTGLACLFLKRGADLG-ARDSEGRDPLTIAMETANADIVTLLRL 322

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS 345
           A   +         A  E  +D   + + +  D 
Sbjct: 323 AKMREAEAAQ--GQAGDETYLDIFRDFSLMASDD 354

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 69.4 bits (169), Expect = 9e-13
 Identities = 40/174 (22%), Positives = 56/174 (32%), Gaps = 36/174 (20%)

Query: 521 NGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADL 580
           N  N     +TPL++A     L    +LL +GA V+     G   L +A   GHT +A L
Sbjct: 227 NWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACL 286

Query: 581 LLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVAD 640
            L  GA+                            + A+   G   LT A E  + D+  
Sbjct: 287 FLKRGAD----------------------------LGARDSEGRDPLTIAMETANADIVT 318

Query: 641 LLL---SYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSS 691
           LL       A         E       +   +  D P       LS  S D  +
Sbjct: 319 LLRLAKMREAEAAQGQAGDETYLDIFRDFSLMASDDPE-----KLSRRSHDLHT 367

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 67.5 bits (164), Expect = 4e-12
 Identities = 32/180 (17%), Positives = 54/180 (30%), Gaps = 4/180 (2%)

Query: 78  GKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVK 137
           G+          P V  + +         +          +  P        +     + 
Sbjct: 156 GRRGGRGRPRGQPPVPPKPSIRPRPGSLRSKPEPPSEDLGSLHP-GALLFRASGHPPSLP 214

Query: 138 TVKKLLTEGRSVHETT--DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM 195
           T+   L  G  V+      +  + L  A +A      + LL   ANV      G   PL 
Sbjct: 215 TMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAG-RGPLH 273

Query: 196 EAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNEN 255
            A   G   +  L +  GAD+  + S G  PL  A    +  +V +L        +  + 
Sbjct: 274 HATILGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQG 333

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 64.8 bits (157), Expect = 3e-11
 Identities = 33/168 (19%), Positives = 51/168 (30%), Gaps = 35/168 (20%)

Query: 529 ASTPLMEAAQEGHLELVRYLLDSGAQVHAKT--QTGDTALTYACENGHTDVADLLLSYGA 586
            +     +     L  +   L  GA V+     Q   T L  A         + LL  GA
Sbjct: 200 GALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGA 259

Query: 587 NLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
           N++                                 G   L +A   GHT +A L L  G
Sbjct: 260 NVN----------------------------QADSAGRGPLHHATILGHTGLACLFLKRG 291

Query: 647 ANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDS 689
           A+L     +    L  A +  +A++V LL          +     D++
Sbjct: 292 ADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDET 339

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} Length = 368

 Score = 54.0 bits (129), Expect = 8e-08
 Identities = 24/114 (21%), Positives = 37/114 (32%), Gaps = 1/114 (0%)

Query: 235 HEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGIN-THSNEFKESA 293
               +R   E  +        G      +     +      L +GA +N  +  +   + 
Sbjct: 179 RPGSLRSKPEPPSEDLGSLHPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATP 238

Query: 294 LTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           L  A     L    FLL  GA+           L  A++ GH  +A L L  GA
Sbjct: 239 LIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATILGHTGLACLFLKRGA 292

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 75.4 bits (185), Expect = 5e-15
 Identities = 33/169 (19%), Positives = 57/169 (33%), Gaps = 37/169 (21%)

Query: 119 PRPQNERSLVQACSDGDVKTVKKLLTEGRSV------HETTDEGESLLSLACSAGYYELA 172
                 + L  A  + D+ +V +    G+         +     E +L LA         
Sbjct: 147 RCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVA----- 201

Query: 173 QVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACA 232
                               PL++            +I +G  ++ +++ GNT L YA  
Sbjct: 202 ---------------NQASLPLVD-----------FIIQNGGHLDAKAADGNTALHYAAL 235

Query: 233 GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG 281
                 +++LL+  A V   NE G T L  A    H    ++L +  AG
Sbjct: 236 YNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 68.9 bits (168), Expect = 8e-13
 Identities = 28/123 (22%), Positives = 49/123 (39%), Gaps = 10/123 (8%)

Query: 203 IEIVRLLINHGADVNGQ------SSSGNTPLMYACAGGHEAVVRV---LLECGANVEDHN 253
           +  V     +G D           +     L  A    ++A + +   +++ G +++   
Sbjct: 164 LLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKA 223

Query: 254 ENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
            +G+T L  AA        K+LL+  A + T  NE  E+AL +A  K H +    L  A 
Sbjct: 224 ADGNTALHYAALYNQPDCLKLLLKGRALVGT-VNEAGETALDIARKKHHKECEELLEQAQ 282

Query: 314 ADQ 316
           A  
Sbjct: 283 AGT 285

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 68.5 bits (167), Expect = 9e-13
 Identities = 26/101 (25%), Positives = 43/101 (42%), Gaps = 6/101 (5%)

Query: 493 AHTEETQETALTLACCGGF---LDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVR 546
              +  +E  L LA        L + DF+++NG ++       +T L  AA     + ++
Sbjct: 184 PDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLK 243

Query: 547 YLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
            LL   A V    + G+TAL  A +  H +  +LL    A 
Sbjct: 244 LLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG 284

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 62.7 bits (152), Expect = 9e-11
 Identities = 28/114 (24%), Positives = 41/114 (35%), Gaps = 28/114 (24%)

Query: 535 EAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTML 594
           + A +  L LV +++ +G  + AK   G+TAL YA      D   LLL   A        
Sbjct: 199 KVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRAL------- 251

Query: 595 IEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 648
                                V    + G+TAL  A +  H +  +LL    A 
Sbjct: 252 ---------------------VGTVNEAGETALDIARKKHHKECEELLEQAQAG 284

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 58.8 bits (142), Expect = 1e-09
 Identities = 28/138 (20%), Positives = 40/138 (28%), Gaps = 8/138 (5%)

Query: 541 HLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTML---IEA 597
                R       ++       D            D    L    A      +L   ++ 
Sbjct: 141 EHRFARRCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKV 200

Query: 598 AKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNS 652
           A      +V  ++     + AK   G+TAL YA      D   LLL   A +        
Sbjct: 201 ANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRALVGTVNEAGE 260

Query: 653 TMLIEAAKGGHANVVQLL 670
           T L  A K  H    +LL
Sbjct: 261 TALDIARKKHHKECEELL 278

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 58.1 bits (140), Expect = 3e-09
 Identities = 20/113 (17%), Positives = 36/113 (31%), Gaps = 10/113 (8%)

Query: 242 LLECGANV------EDHNENGHTPLMEAASAGHVG---VAKILLEYGAGINTHSNEFKES 292
               G +        D        L  A    +     +   +++ G  ++  + +   +
Sbjct: 170 AFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAAD-GNT 228

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS 345
           AL  A      D ++ LL   A      +   TAL  A    H E  +LL  +
Sbjct: 229 ALHYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQA 281

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 46.5 bits (110), Expect = 1e-05
 Identities = 20/95 (21%), Positives = 33/95 (34%), Gaps = 8/95 (8%)

Query: 261 MEAASAGHVGVAKILLEYGAGIN-----THSNEFKESALTLAC---YKGHLDMVRFLLSA 312
             A     +         G           +   +E  L LA     +  L +V F++  
Sbjct: 156 WTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQN 215

Query: 313 GADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           G   + K  + +TAL  A++    +  KLLL   A
Sbjct: 216 GGHLDAKAADGNTALHYAALYNQPDCLKLLLKGRA 250

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens} Length = 301

 Score = 41.1 bits (96), Expect = 8e-04
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 702 VHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
           + AK   G+TAL YA      D   LLL   A +
Sbjct: 219 LDAKAADGNTALHYAALYNQPDCLKLLLKGRALV 252

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 75.7 bits (186), Expect = 2e-14
 Identities = 31/163 (19%), Positives = 56/163 (34%), Gaps = 37/163 (22%)

Query: 119 PRPQNERSLVQACSDGDVKTVKKLLTEGRSVHET------TDEGESLLSLACSAGYYELA 172
                 + L  A  + D+ +V +    G+   +           E +L LA         
Sbjct: 128 RCTPEPQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAV-------- 179

Query: 173 QVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACA 232
                                  + A+   + +V  +I +G  ++ +++ GNT L YA  
Sbjct: 180 -----------------------KVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAAL 216

Query: 233 GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
                 +++LL+  A V   NE G T L  A    H    ++L
Sbjct: 217 YNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 58.0 bits (140), Expect = 6e-09
 Identities = 26/96 (27%), Positives = 44/96 (45%), Gaps = 6/96 (6%)

Query: 492 NAHTEETQETALTLACC---GGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELV 545
               +  +E  L LA        L + DF+++NG +++  A+   T L  AA     + +
Sbjct: 164 GPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDCL 223

Query: 546 RYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLL 581
           + LL   A V    + G+TAL  A +  H +  +LL
Sbjct: 224 KLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 57.2 bits (138), Expect = 1e-08
 Identities = 28/97 (28%), Positives = 40/97 (41%), Gaps = 8/97 (8%)

Query: 521 NGANIELGASTPL---MEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDV 577
            G + +      L   ++ A +  L LV +++ +G  + AK   G+TAL YA      D 
Sbjct: 163 PGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAALYNQPDC 222

Query: 578 ADLLLSYGA-----NLDNSTMLIEAAKGGHANVVQLL 609
             LLL   A     N    T L  A K  H    +LL
Sbjct: 223 LKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 259

>3lvq_E ARF-GAP with SH3 domain, ANK repeat and PH domain containing protein 3, ADP-ribosylation...; GDP, ASAP3, UPLC1, linkers, alternat splicing; HET: GDP; 3.38A {Homo sapiens} PDB: 3lvr_E* Length = 497

 Score = 55.3 bits (133), Expect = 4e-08
 Identities = 27/104 (25%), Positives = 36/104 (34%), Gaps = 8/104 (7%)

Query: 575 TDVADLLLSYGANLDNSTML---IEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYAC 631
            D    L    A      +L   ++ A      +V  ++     + AK   G+TAL YA 
Sbjct: 156 QDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHYAA 215

Query: 632 ENGHTDVADLLLSYGA-----NLDNSTMLIEAAKGGHANVVQLL 670
                D   LLL   A     N    T L  A K  H    +LL
Sbjct: 216 LYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELL 259

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 54.5 bits (130), Expect = 1e-07
 Identities = 93/651 (14%), Positives = 181/651 (27%), Gaps = 187/651 (28%)

Query: 121 PQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACS-AGYYELAQVLLAMH 179
              E + V    + D K V+ +    +S+  + +E + ++    + +G   L   LL+  
Sbjct: 23  SVFEDAFVD---NFDCKDVQDMP---KSIL-SKEEIDHIIMSKDAVSGTLRLFWTLLSKQ 75

Query: 180 ANVEDRGIKGECTP----LMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH 235
             +  + ++         LM    +   +   +   +    + +  + N       A  +
Sbjct: 76  EEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRD-RLYNDNQVF----AKYN 130

Query: 236 EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG-AGINTHSNEFKESAL 294
             V R                   L+E   A +V +       G  G        K + +
Sbjct: 131 --VSR---------LQPYLKLRQALLELRPAKNVLI------DGVLGSG------K-TWV 166

Query: 295 TL-AC--YKGHLDMVR--FLLSAGADQEHKTD-EMHTAL------MEASMDGHVEVAKLL 342
            L  C  YK    M    F L+       +T  EM   L         S   H    KL 
Sbjct: 167 ALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLR 226

Query: 343 LDSGAQSVSAYARHDFFPN-----DKCERPSSISY----------TYSRSLVQACSDGDV 387
           + S    +    +   + N        +   + +           T  + +    S    
Sbjct: 227 IHSIQAELRRLLKSKPYENCLLVLLNVQNAKAWNAFNLSCKILLTTRFKQVTDFLS---A 283

Query: 388 KTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPL-- 445
            T   +  +  S+  T DE +SLL         +L + +L  +             P   
Sbjct: 284 ATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTN-------------PRRL 330

Query: 446 -MEAASSGRQCNLNESVSAYARHDFFPN----------DKSVNGLQAS---------VIL 485
            + A S      + + +   A  D + +          + S+N L+ +          + 
Sbjct: 331 SIIAES------IRDGL---ATWDNWKHVNCDKLTTIIESSLNVLEPAEYRKMFDRLSVF 381

Query: 486 IPGAKINAHT-------EETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQ 538
            P A I               +  + +           + L      E   S P +    
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVNKL------HKYSLVEKQPKESTISIPSI---- 431

Query: 539 EGHLELVRYLLDSGAQVHAK-TQTGDTALTYACENGHTDVAD----LLLSY---GANLDN 590
             +LEL +  L++   +H       +   T+  ++      D      + +         
Sbjct: 432 --YLEL-KVKLENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPE 488

Query: 591 STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALT-----------------YACEN 633
              L             + LDF R +  K +   TA                   Y C+N
Sbjct: 489 RMTLFR----------MVFLDF-RFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDN 537

Query: 634 GHT------DVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVI 678
                     + D L     NL  S          + +++++ L      I
Sbjct: 538 DPKYERLVNAILDFLPKIEENLICSK---------YTDLLRIALMAEDEAI 579

>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis, programmed cell death; HET: DTP; 6.90A {Drosophila melanogaster} PDB: 3iz8_A* Length = 1221

 Score = 45.6 bits (107), Expect = 6e-05
 Identities = 77/483 (15%), Positives = 145/483 (30%), Gaps = 124/483 (25%)

Query: 43  YYELAQVLLAM--HANVEDRGIKGECTPLMEAASSGFGK--LATGDGKLADPEVLRRLTS 98
           Y +L Q LL +    NV    I G     +     G GK  +A         +V    + 
Sbjct: 137 YLKLRQALLELRPAKNV---LIDG-----V----LGSGKTWVAL--------DVCL--SY 174

Query: 99  SVSCALDEAAAALTRMRNENPRPQNERSLVQA-CSDGDVKTVKKLLTEGRSVHETTDEGE 157
            V C +D     L  ++N N  P+    ++Q      D     +                
Sbjct: 175 KVQCKMDFKIFWLN-LKNCN-SPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQA 232

Query: 158 SLLSLACSAGYYELAQVLLAMHANVEDRGI----KGECTPLMEAASSGFIEIVRLLINHG 213
            L  L  S  Y      LL +  NV++          C  L+   ++ F ++        
Sbjct: 233 ELRRLLKSKPY---ENCLLVL-LNVQNAKAWNAFNLSCKILL---TTRFKQV-------- 277

Query: 214 ADVNGQSSSGNTPLMYACAG-GHEAVVRVLLEC-GANVED--HNENGHTPL---MEAASA 266
            D    +++ +  L +       + V  +LL+      +D         P    + A S 
Sbjct: 278 TDFLSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNPRRLSIIAESI 337

Query: 267 G----------HVGVAKILLEYGAGINT-HSNEFKESALTLACYKGHLDMVRF------- 308
                      HV   K+     + +N     E+++       +     +  F       
Sbjct: 338 RDGLATWDNWKHVNCDKLTTIIESSLNVLEPAEYRK------MFD---RLSVFPPSAHIP 388

Query: 309 --LLS------AGADQEHKTDEMHTALM--EASMDGHVEVAKLLLDSGAQS--------- 349
             LLS        +D     +++H   +  +   +  + +  + L+   +          
Sbjct: 389 TILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLENEYALHRS 448

Query: 350 -VSAYARHDFFPNDKCERPSSISYTYS---RSLVQACSDGDVKTVKKLLT-----EGRSV 400
            V  Y     F +D    P    Y YS     L        +   + +       E +  
Sbjct: 449 IVDHYNIPKTFDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIR 508

Query: 401 HETT--DEGESLLSLACSAGYYE------------LAQVLLAMHANVEDRGIKGECTPLM 446
           H++T  +   S+L+      +Y+            L   +L     +E+  I  + T L+
Sbjct: 509 HDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLL 568

Query: 447 EAA 449
             A
Sbjct: 569 RIA 571

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	739
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
1n11_A	437	Ankyrin; clathrin, BAND 3, anion exchanger, struct	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
4g8k_A	337	2-5A-dependent ribonuclease; ankyrin-repeat domain	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
1wdy_A	285	2-5A-dependent ribonuclease; hydrolase, RNA-bindin	100.0
3utm_A	351	Tankyrase-1; tankyrase, TNKS, ankryin repeat clust	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
3d9h_A	285	CDNA FLJ77766, highly similar to HOMO sapiens anky	100.0
2xai_A	261	ASB-9, ankyrin repeat and SOCS box protein 9; tran	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
3ljn_A	364	Hypothetical protein; ankyrin, structural genomics	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
2fo1_E	373	LIN-12 protein; beta-barrel, protein-DNA complex,	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
1yyh_A	253	HN1;, notch 1, ankyrin domain; ankyrin repeats, ce	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
1k1a_A	241	B-cell lymphoma 3-encoded protein; BCL-3, NF-kappa	100.0
3b7b_A	237	Euchromatic histone-lysine N-methyltransferase 1;	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
1oy3_D	282	Transcription factor inhibitor I-kappa-B-beta; pro	100.0
4b93_B	269	Ankyrin repeat domain-containing protein 27; endoc	100.0
3aji_A	231	26S proteasome non-ATPase regulatory subunit 10; g	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
3eu9_A	240	Huntingtin-interacting protein 14; epigenetics, an	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
3kea_A	285	K1L; tropism, ANK repeat, viral protein; 2.30A {Va	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
2dzn_A	228	Probable 26S proteasome regulatory subunit P28; an	100.0
2f8y_A	223	Notch homolog 1, translocation-associated (drosoph	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
1s70_B	299	130 kDa myosin-binding subunit of smooth muscle my	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	100.0
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	100.0
2rfa_A	232	Transient receptor potential cation channel subfa	100.0
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
4gpm_A	169	Engineered protein OR264; de novo protein, structu	100.0
3hra_A	201	Ankyrin repeat family protein; structural protein;	100.0
1ikn_D	236	Protein (I-kappa-B-alpha), protein (NF-kappa-B P50	100.0
1sw6_A	327	Regulatory protein SWI6; transcription regulation,	100.0
2etb_A	256	Transient receptor potential cation channel subfam	100.0
2pnn_A	273	Transient receptor potential cation channel subfa	99.98
3hra_A	201	Ankyrin repeat family protein; structural protein;	99.98
2etb_A	256	Transient receptor potential cation channel subfam	99.97
2pnn_A	273	Transient receptor potential cation channel subfa	99.97
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.97
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.97
3jxi_A	260	Vanilloid receptor-related osmotically activated p	99.96
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.96
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.96
4hbd_A	276	KN motif and ankyrin repeat domain-containing Pro;	99.96
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.96
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.96
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.96
2rfm_A	192	Putative ankyrin repeat protein TV1425; ANK repeat	99.96
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.95
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.95
3v30_A	172	DNA-binding protein rfxank; structural genomics co	99.95
1ihb_A	162	P18-INK4C(INK6), cyclin-dependent kinase 6 inhibit	99.95
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.95
2aja_A	376	Ankyrin repeat family protein; NESG, Q5ZSV0, struc	99.95
2y1l_E	169	Darpin-8.4; hydrolase-inhibitor complex, DEVD darp	99.95
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.95
3v31_A	167	Ankyrin repeat family A protein 2; structural geno	99.95
1awc_B	153	Protein (GA binding protein beta 1); complex (tran	99.95
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.95
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.94
3f6q_A	179	Integrin-linked protein kinase; ILK, integrin-link	99.94
3twr_A	165	Tankyrase-2; ankyrin repeat, protein-protein inter	99.94
2vge_A	229	RELA-associated inhibitor; iaspp, nucleus, apoptos	99.94
1bd8_A	156	P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyr	99.94
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.93
1ycs_B	239	53BP2, P53BP2; ankyrin repeats, SH3, tumor suppres	99.93
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.92
1d9s_A	136	Cyclin-dependent kinase 4 inhibitor B; helix-turn-	99.92
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.92
3t8k_A	186	Uncharacterized protein; structural genomics, PSI-	99.92
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.91
1bi7_B	156	P16INK4A, MTS1, multiple tumor suppressor; cyclin	99.91
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.9
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.9
2jab_A	136	H10-2-G3; HER2, darpin, ankyrin repeat protein, me	99.9
1n0r_A	126	4ANK, 4 ankyrin repeats; structural protein; 1.50A	99.89
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.88
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.88
3deo_A	183	Signal recognition particle 43 kDa protein; chloro	99.87
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.87
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.86
3c5r_A	137	BARD-1, BRCA1-associated ring domain protein 1; an	99.86
3ui2_A	244	Signal recognition particle 43 kDa protein, chlor;	99.86
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.85
2b0o_E	301	UPLC1; arfgap, structural genomics, structural gen	99.85
3aaa_C	123	Myotrophin, protein V-1; actin capping protein, ba	99.84
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.83
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.83
3ehr_A	222	Osteoclast-stimulating factor 1; beta barrel, heli	99.83
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.83
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.82
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.81
1dcq_A	278	PYK2-associated protein beta; zinc-binding module,	99.81
3jue_A	368	Arfgap with coiled-coil, ANK repeat and PH domain	99.8
3lvq_E	497	ARF-GAP with SH3 domain, ANK repeat and PH domain	99.8
1n0q_A	93	3ANK, 3 ankyrin repeats; structural protein; 1.26A	99.8
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.78
2l6b_A	115	NR1C; ankyrin, consensus, repeat protein, ising mo	99.74
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.68
2zgd_A	110	3 repeat synthetic ankyrin; ankyrin repeat, hydrox	99.64

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=1.2e-60  Score=493.96  Aligned_cols=395  Identities=28%  Similarity=0.335  Sum_probs=340.0

Q ss_pred             cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhh
Q psy903           20 EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSS   99 (739)
Q Consensus        20 ~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~   99 (739)
                      .|++++..+..|+||||+|+..|+.++|++|+++|++++..+..+. ||||+|+..                        
T Consensus         3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~~~-t~L~~A~~~------------------------   57 (437)
T 1n11_A            3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVKVE-TPLHMAARA------------------------   57 (437)
T ss_dssp             ------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCC-CHHHHHHHH------------------------
T ss_pred             CCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCC-CHHHHHHHc------------------------
Confidence            5889999999999999999999999999999999999988776664 666666654                        


Q ss_pred             hhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy903          100 VSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH  179 (739)
Q Consensus       100 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~  179 (739)
                                                        |+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|
T Consensus        58 ----------------------------------g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g  103 (437)
T 1n11_A           58 ----------------------------------GHTEVAKYLLQNKAKVNAKAKDDQTPLHCAARIGHTNMVKLLLENN  103 (437)
T ss_dssp             ----------------------------------TCHHHHHHHHHHTCCSSCCCTTSCCHHHHHHHHTCHHHHHHHHHHT
T ss_pred             ----------------------------------CCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhCC
Confidence                                              5799999999999999999999999999999999999999999999


Q ss_pred             CCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcH
Q psy903          180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTP  259 (739)
Q Consensus       180 ~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~  259 (739)
                      ++++..+.. |.||||+|+..|+.+++++|++++++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.||
T Consensus       104 a~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~  182 (437)
T 1n11_A          104 ANPNLATTA-GHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTP  182 (437)
T ss_dssp             CCTTCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCH
T ss_pred             CCCCCCCCC-CCcHHHHHHHcCCHHHHHHHHhCCCCCcCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCH
Confidence            998877655 5699999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHH
Q psy903          260 LMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA  339 (739)
Q Consensus       260 L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~  339 (739)
                      ||+|+..|+.+++++|+++|.++... +..+.|||++|+..++.+++++|++.|++++..+..|.|||++|+..++.+++
T Consensus       183 L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v  261 (437)
T 1n11_A          183 LHVAVHHNNLDIVKLLLPRGGSPHSP-AWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMV  261 (437)
T ss_dssp             HHHHHHTTCHHHHHHHGGGTCCSCCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHcCCHHHHHHHHhCCCCCCCc-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHCCCHHHH
Confidence            99999999999999999999988764 44589999999999999999999999999999999999999999998888888


Q ss_pred             HHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCc
Q psy903          340 KLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY  419 (739)
Q Consensus       340 ~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~  419 (739)
                      ++|++++++                                                   ++..+..|.||||.|+..++
T Consensus       262 ~~Ll~~~~~---------------------------------------------------~~~~~~~g~t~L~~A~~~~~  290 (437)
T 1n11_A          262 ALLLSKQAN---------------------------------------------------GNLGNKSGLTPLHLVAQEGH  290 (437)
T ss_dssp             HHHHTTTCC---------------------------------------------------TTCCCTTCCCHHHHHHHHTC
T ss_pred             HHHHhcCCC---------------------------------------------------CCCCCCCCCCHHHHHHHcCC
Confidence            887765543                                                   55677889999999999999


Q ss_pred             HHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCC
Q psy903          420 YELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQ  499 (739)
Q Consensus       420 ~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~  499 (739)
                      .+++++|++++.+++..+..                                                           +
T Consensus       291 ~~~~~~Ll~~g~~~~~~~~~-----------------------------------------------------------g  311 (437)
T 1n11_A          291 VPVADVLIKHGVMVDATTRM-----------------------------------------------------------G  311 (437)
T ss_dssp             HHHHHHHHHHTCCTTCCCSS-----------------------------------------------------------C
T ss_pred             HHHHHHHHhCCccCCCCCCC-----------------------------------------------------------C
Confidence            99999999988877655432                                                           4


Q ss_pred             CCHHHHHHhcCCHHHHHHHHHcCCCCCC---CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHH
Q psy903          500 ETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTD  576 (739)
Q Consensus       500 ~~~l~~a~~~~~~~~v~~Ll~~~~~~~~---~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~  576 (739)
                      .||||+|+..|+.+++++|+++|++++.   .|.||||+|+..|+.+++++|+++|++++.+|.+|.||+++|.+.|+.+
T Consensus       312 ~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~l~~A~~~g~~~  391 (437)
T 1n11_A          312 YTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYIS  391 (437)
T ss_dssp             CCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHH
T ss_pred             CCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCCCCCCCCCCCHHHHHHHcCcHH
Confidence            5777777777888888888888887743   5788999999999999999999999999888888999999998888888


Q ss_pred             HHHHHHhCC
Q psy903          577 VADLLLSYG  585 (739)
Q Consensus       577 iv~~Ll~~~  585 (739)
                      ++++|....
T Consensus       392 ~~~~l~~~~  400 (437)
T 1n11_A          392 VTDVLKVVT  400 (437)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHHhcc
Confidence            888876543

>1n11_A Ankyrin; clathrin, BAND 3, anion exchanger, structural protein; 2.70A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=3.5e-60  Score=490.45  Aligned_cols=391  Identities=30%  Similarity=0.365  Sum_probs=311.1

Q ss_pred             cCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCC
Q psy903          145 EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGN  224 (739)
Q Consensus       145 ~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~  224 (739)
                      .|++++..+..|.||||+|+..|+.++|++|++.|++++..+.. +.||||+|+..|+.+++++|+++|++++.++..|.
T Consensus         3 ~g~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~-~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~   81 (437)
T 1n11_A            3 PGISGGGGGESGLTPLHVASFMGHLPIVKNLLQRGASPNVSNVK-VETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ   81 (437)
T ss_dssp             ------------CCHHHHHHHHTCHHHHHHHHHTTCCSCCSSSC-CCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSC
T ss_pred             CCCCccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCC
Confidence            57788888999999999999999999999999999988776654 46999999999999999999999999999999999


Q ss_pred             cHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHH
Q psy903          225 TPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLD  304 (739)
Q Consensus       225 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~  304 (739)
                      ||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++++.+.... +..+.||||+|+..|+.+
T Consensus        82 t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~-~~~g~t~L~~A~~~g~~~  160 (437)
T 1n11_A           82 TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACM-TKKGFTPLHVAAKYGKVR  160 (437)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCC-CTTSCCHHHHHHHTTCHH
T ss_pred             CHHHHHHHCCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCCCcCC-CCCCCCHHHHHHHcCCHH
Confidence            9999999999999999999999999999999999999999999999999999998887654 445889999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhc
Q psy903          305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSD  384 (739)
Q Consensus       305 ~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~  384 (739)
                      ++++|+++|++++..+..|.|||++|+..++.+++++|++++.+                                    
T Consensus       161 ~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~------------------------------------  204 (437)
T 1n11_A          161 VAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGS------------------------------------  204 (437)
T ss_dssp             HHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHHHHGGGTCC------------------------------------
T ss_pred             HHHHHHhCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhCCCC------------------------------------
Confidence            99999999999999999999999999988888888888776554                                    


Q ss_pred             CCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhh
Q psy903          385 GDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAY  464 (739)
Q Consensus       385 ~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~  464 (739)
                                     ++..+..|.|||++|+..++.+++++|++.+.+++..+.                          
T Consensus       205 ---------------~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~--------------------------  243 (437)
T 1n11_A          205 ---------------PHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESV--------------------------  243 (437)
T ss_dssp             ---------------SCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCT--------------------------
T ss_pred             ---------------CCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCC--------------------------
Confidence                           344566678888888888888888888887776554332                          


Q ss_pred             hccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCCCC---CCCCcHHHHHHHcCc
Q psy903          465 ARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIE---LGASTPLMEAAQEGH  541 (739)
Q Consensus       465 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~---~~~~t~L~~A~~~~~  541 (739)
                                                       .+.|||+.|+..|+.+++++|++++++++   ..|.||||+|+..|+
T Consensus       244 ---------------------------------~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~  290 (437)
T 1n11_A          244 ---------------------------------QGVTPLHLAAQEGHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGH  290 (437)
T ss_dssp             ---------------------------------TCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             ---------------------------------CCCCHHHHHHHCCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCC
Confidence                                             23466666666677777777777766653   356788888888888


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC-----CCcHHHHHHHcCCHHHHHHHhhCCCCC
Q psy903          542 LELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSV  616 (739)
Q Consensus       542 ~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~-----~~~~l~~A~~~~~~~~v~~L~~~~~~~  616 (739)
                      .+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++     |.||||.|+..|+.++|++|+++|+++
T Consensus       291 ~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~L~~A~~~g~~~iv~~Ll~~ga~~  370 (437)
T 1n11_A          291 VPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASP  370 (437)
T ss_dssp             HHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred             HHHHHHHHhCCccCCCCCCCCCCHHHHHHHcCcHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHCChHHHHHHHHHCcCCC
Confidence            888888888888888888888888888888888888877777776653     667777777777777777888778888


Q ss_pred             CcCCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Q psy903          617 HAKTQTGDTALTYACENGHTDVADLLLSYGA  647 (739)
Q Consensus       617 ~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~  647 (739)
                      +.+|..|.|||++|++.|+.+++++|.....
T Consensus       371 ~~~~~~g~t~l~~A~~~g~~~~~~~l~~~~~  401 (437)
T 1n11_A          371 NEVSSDGTTPLAIAKRLGYISVTDVLKVVTD  401 (437)
T ss_dssp             CCCCSSSCCHHHHHHHTTCHHHHHHHHHHCC
T ss_pred             CCCCCCCCCHHHHHHHcCcHHHHHHHHhccc
Confidence            8888888888888888888888777766543

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=8.5e-45  Score=360.85  Aligned_cols=285  Identities=32%  Similarity=0.410  Sum_probs=248.5

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCC-CCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGK   79 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~   79 (739)
                      +|+.||+.|++++|++||++|+++|.++.. |+||||+|+..|+.++|++|+++|++++..+..+. ++++.++..    
T Consensus        28 ~L~~Av~~g~~~~V~~LL~~Gadvn~~~~~~g~TpLh~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~-~~~~~~~~~----  102 (337)
T 4g8k_A           28 LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGA-TPFILAAIA----  102 (337)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC-CHHHHHHHH----
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcCHHHHHHHcCCHHHHHHHHHcCCchhhhccCCC-chhHHHHhc----
Confidence            589999999999999999999999988754 99999999999999999999999999988877665 766666654    


Q ss_pred             cccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcH
Q psy903           80 LATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL  159 (739)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~  159 (739)
                                                                            +....+..+++.+.+++..+..|.||
T Consensus       103 ------------------------------------------------------~~~~~~~~~~~~~~~~~~~d~~g~t~  128 (337)
T 4g8k_A          103 ------------------------------------------------------GSVKLLKLFLSKGADVNECDFYGFTA  128 (337)
T ss_dssp             ------------------------------------------------------TCHHHHHHHHTTTCCTTCBCTTCCBH
T ss_pred             ------------------------------------------------------ccchhhHHhhhccchhhhhccCCCCH
Confidence                                                                  46778888889999999999999999


Q ss_pred             HHHHHHcCcHHHHHHHHhCCCCccccC---------CCCCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHH
Q psy903          160 LSLACSAGYYELAQVLLAMHANVEDRG---------IKGECTPLMEAASSGFIEIVRLLIN-HGADVNGQSSSGNTPLMY  229 (739)
Q Consensus       160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~---------~~~~~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~L~~  229 (739)
                      ||+|+..|+.+++++|++.|++++...         ...|.||||+|+..|+.+++++|++ .|++++.++..|.|+++.
T Consensus       129 l~~A~~~~~~~~~~~ll~~ga~~~~~~~~~~~~~~~~~~g~T~L~~A~~~g~~~~v~~LL~~~gad~n~~d~~g~t~l~~  208 (337)
T 4g8k_A          129 FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH  208 (337)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCCCC-----CTTCSCCHHHHHHHHTCHHHHHHHHHHSCCCTTCCCTTSCCHHHH
T ss_pred             HHHHHHcCcHHHHHHHHHcCCCcchhhccccccccccCCCCcHHHHHHHCCCHHHHHHHHhccCCCcCccCCCCCcHHHH
Confidence            999999999999999999998876432         2346799999999999999999995 599999999999999998


Q ss_pred             HHhcCc----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc-CCCCcccCcCccCCHHHHHHHcCCHH
Q psy903          230 ACAGGH----EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY-GAGINTHSNEFKESALTLACYKGHLD  304 (739)
Q Consensus       230 A~~~~~----~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~-~~~~~~~~~~~~~~~l~~A~~~~~~~  304 (739)
                      ++..+.    ..++++|+++|++++.+|..|.||||+|+..|+.+++++|++. |.+++.. +..|.||||+|+..|+.+
T Consensus       209 ~~~~~~~~~~~~i~~lLl~~gad~n~~d~~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~-d~~G~TpL~~A~~~g~~~  287 (337)
T 4g8k_A          209 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT-DSDGKTALLLAVELKLKK  287 (337)
T ss_dssp             HHHHSCTTTHHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCB-CTTSCBHHHHHHHTTCHH
T ss_pred             HHHHcCcccHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhhhhHHHHHHHHhcCCcccCc-CCCCCCHHHHHHHcCCHH
Confidence            876543    4688999999999999999999999999999999999999985 6777764 456999999999999999


Q ss_pred             HHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCch
Q psy903          305 MVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSV  350 (739)
Q Consensus       305 ~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~  350 (739)
                      +|++|+++|++++..     +||++|+..++.+++++|+++|+++.
T Consensus       288 iv~~Ll~~GAd~n~~-----~~L~~A~~~~~~~iv~~Ll~~GA~~d  328 (337)
T 4g8k_A          288 IAELLCKRGASTDCG-----DLVMTARRNYDHSLVKVLLSHGAKED  328 (337)
T ss_dssp             HHHHHHTTSCSSTTC-----CHHHHHHHTTCHHHHHHHHHTTCCC-
T ss_pred             HHHHHHHCCCCCCCC-----CHHHHHHHcCCHHHHHHHHHCcCCCC
Confidence            999999999988754     59999999999999999999999865

>4g8k_A 2-5A-dependent ribonuclease; ankyrin-repeat domain, single-stranded RNA, hydrolase; 2.40A {Homo sapiens} PDB: 4g8l_A*

Probab=100.00  E-value=7.5e-43  Score=346.83  Aligned_cols=92  Identities=28%  Similarity=0.396  Sum_probs=76.7

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCCCCcHHHHHHHcCCHHHH
Q psy903          528 GASTPLMEAAQEGHLELVRYLLDS-GAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVV  606 (739)
Q Consensus       528 ~~~t~L~~A~~~~~~~~v~~Ll~~-g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~~~~~l~~A~~~~~~~~v  606 (739)
                      .|.||||+|+..++.+++++|++. |++++.+|..|+||||+|++.|+.++|++|+++|++++..+||+.|+..|+.++|
T Consensus       238 ~g~t~L~~a~~~~~~~~v~~Ll~~~~~~vn~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GAd~n~~~~L~~A~~~~~~~iv  317 (337)
T 4g8k_A          238 RGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDLVMTARRNYDHSLV  317 (337)
T ss_dssp             GGCCHHHHHHHTTCHHHHHHHHTSTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHTTSCSSTTCCHHHHHHHTTCHHHH
T ss_pred             CCCCHHHHHHHhhhhHHHHHHHHhcCCcccCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCHHHHHHHcCCHHHH
Confidence            356888888888888888888875 7888999999999999999999999999999988888888888888888888888


Q ss_pred             HHHhhCCCCCCcC
Q psy903          607 QLLLDFPRSVHAK  619 (739)
Q Consensus       607 ~~L~~~~~~~~~~  619 (739)
                      ++|+++|++++..
T Consensus       318 ~~Ll~~GA~~d~~  330 (337)
T 4g8k_A          318 KVLLSHGAKEDFH  330 (337)
T ss_dssp             HHHHHTTCCC---
T ss_pred             HHHHHCcCCCCCC
Confidence            8888888877654

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=2.4e-42  Score=335.99  Aligned_cols=260  Identities=32%  Similarity=0.413  Sum_probs=231.1

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCccc-CCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHET-TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGK   79 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~   79 (739)
                      ||+.|+..|++++|++|++.|++++.. +..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+..    
T Consensus         8 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~~----   82 (285)
T 1wdy_A            8 LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGA-TPFLLAAIA----   82 (285)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC-CHHHHHHHH----
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-CHHHHHHHc----
Confidence            588999999999999999999999887 77899999999999999999999999999887776654 666666654    


Q ss_pred             cccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcH
Q psy903           80 LATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL  159 (739)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~  159 (739)
                                                                            |+.+++++|++.|++++..+..|.||
T Consensus        83 ------------------------------------------------------~~~~~v~~Ll~~g~~~~~~~~~g~t~  108 (285)
T 1wdy_A           83 ------------------------------------------------------GSVKLLKLFLSKGADVNECDFYGFTA  108 (285)
T ss_dssp             ------------------------------------------------------TCHHHHHHHHHTTCCTTCBCTTCCBH
T ss_pred             ------------------------------------------------------CCHHHHHHHHHcCCCCCccCcccCCH
Confidence                                                                  47889999999999999999999999


Q ss_pred             HHHHHHcCcHHHHHHHHhCCCCccccC---------CCCCCcHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCcHHHH
Q psy903          160 LSLACSAGYYELAQVLLAMHANVEDRG---------IKGECTPLMEAASSGFIEIVRLLINH-GADVNGQSSSGNTPLMY  229 (739)
Q Consensus       160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~---------~~~~~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~L~~  229 (739)
                      ||+|+..|+.+++++|++.|++++...         ...|.||||+|+..|+.+++++|+++ |++++.++..|.||||+
T Consensus       109 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~l~~  188 (285)
T 1wdy_A          109 FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH  188 (285)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHH
T ss_pred             HHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCCHHHH
Confidence            999999999999999999998887653         34567999999999999999999987 99999999999999999


Q ss_pred             HHhcCc----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH-cCCCCcccCcCccCCHHHHHHHcCCHH
Q psy903          230 ACAGGH----EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE-YGAGINTHSNEFKESALTLACYKGHLD  304 (739)
Q Consensus       230 A~~~~~----~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~-~~~~~~~~~~~~~~~~l~~A~~~~~~~  304 (739)
                      |+..++    .+++++|+++|++++.++..|.||||+|+..|+.+++++|++ .|.+++.. +..|.|||++|+..++.+
T Consensus       189 a~~~~~~~~~~~i~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~-~~~g~t~l~~A~~~~~~~  267 (285)
T 1wdy_A          189 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT-DSDGKTALLLAVELKLKK  267 (285)
T ss_dssp             HHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCC-CTTSCCHHHHHHHTTCHH
T ss_pred             HHHccccchHHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhccCCCcccc-CCCCCcHHHHHHHcCcHH
Confidence            999998    899999999999999999999999999999999999999998 78887764 456899999999999999


Q ss_pred             HHHHHHHcCCCCCCCC
Q psy903          305 MVRFLLSAGADQEHKT  320 (739)
Q Consensus       305 ~v~~Ll~~~~~~~~~~  320 (739)
                      ++++|+++|++++.+|
T Consensus       268 i~~~Ll~~Ga~~~~~d  283 (285)
T 1wdy_A          268 IAELLCKRGASTDCGD  283 (285)
T ss_dssp             HHHHHHHHSSCSCCSS
T ss_pred             HHHHHHHcCCCCCccc
Confidence            9999999999988776

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=1.3e-40  Score=334.47  Aligned_cols=320  Identities=29%  Similarity=0.351  Sum_probs=182.9

Q ss_pred             cHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChH
Q psy903          192 TPLMEAASSGFIEIVRLLINH-GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVG  270 (739)
Q Consensus       192 t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~  270 (739)
                      ++|+.|+..|+.+.++.|+.. +.+++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.+
T Consensus        26 ~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~  105 (351)
T 3utm_A           26 DELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKGGLVPLHNACSYGHYE  105 (351)
T ss_dssp             HHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred             hhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCcHHHHHHHCCCHH
Confidence            556666666665555555543 5555555666666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCch
Q psy903          271 VAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSV  350 (739)
Q Consensus       271 ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~  350 (739)
                      ++++|+++|++++.. +..+.||||+|+..|+.+++++|+++|++++..+..+.++++.++..+..+.+.+....     
T Consensus       106 iv~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~-----  179 (351)
T 3utm_A          106 VTELLLKHGACVNAM-DLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG-----  179 (351)
T ss_dssp             HHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH-----
T ss_pred             HHHHHHHCCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc-----
Confidence            666666666555543 23355666666666666666666666666666666666777666655555555544431     


Q ss_pred             hhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHc---CcHHHHHHHH
Q psy903          351 SAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSA---GYYELAQVLL  427 (739)
Q Consensus       351 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~---~~~~~v~~Ll  427 (739)
                                               .++..++..++.+.++.++..+......+..|.||||.|+..   +..+++++|+
T Consensus       180 -------------------------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~~~~Ll  234 (351)
T 3utm_A          180 -------------------------HSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHPKRKQVAELLL  234 (351)
T ss_dssp             -------------------------HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCSTTHHHHHHHHH
T ss_pred             -------------------------cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCccHHHHHHHHH
Confidence                                     134455555555555555555443334445555555555555   3344555554


Q ss_pred             HcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHH
Q psy903          428 AMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLAC  507 (739)
Q Consensus       428 ~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~  507 (739)
                      +.+++++..                                                                       
T Consensus       235 ~~g~~~~~~-----------------------------------------------------------------------  243 (351)
T 3utm_A          235 RKGANVNEK-----------------------------------------------------------------------  243 (351)
T ss_dssp             HTTCCTTCC-----------------------------------------------------------------------
T ss_pred             HcCCCcCCc-----------------------------------------------------------------------
Confidence            444433222                                                                       


Q ss_pred             hcCCHHHHHHHHHcCCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy903          508 CGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN  587 (739)
Q Consensus       508 ~~~~~~~v~~Ll~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~  587 (739)
                                        +..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|              
T Consensus       244 ------------------~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d~~g~t~L~~A~~~~--------------  291 (351)
T 3utm_A          244 ------------------NKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALDSLGQTALHRAALAG--------------  291 (351)
T ss_dssp             ------------------CTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT--------------
T ss_pred             ------------------CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC--------------
Confidence                              123456666666666666777777777777666666666666666554              


Q ss_pred             CCCCcHHHHHHHcCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHHHcCCHHHHHHHHHcCCC--CCCchHHHHHHhCCC
Q psy903          588 LDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGAN--LDNSTMLIEAAKGGH  663 (739)
Q Consensus       588 ~~~~~~l~~A~~~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~--~~~~~~L~~A~~~g~  663 (739)
                                    +.++|++|+++|++++.+|..|.||+++|    +.+++++|.+.+..  ..+.+++..|++.|.
T Consensus       292 --------------~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~~~~~~~~~l~~A~~~gd  351 (351)
T 3utm_A          292 --------------HLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPMRTSDVDYRLLEASKAGD  351 (351)
T ss_dssp             --------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC--------------------
T ss_pred             --------------cHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhccccccCcceeehhhhhccCC
Confidence                          55556666666777788888899988887    67888888888765  346678888888763

>1wdy_A 2-5A-dependent ribonuclease; hydrolase, RNA-binding; HET: 25A; 1.80A {Homo sapiens} SCOP: d.211.1.1

Probab=100.00  E-value=6.7e-41  Score=325.79  Aligned_cols=262  Identities=31%  Similarity=0.377  Sum_probs=241.6

Q ss_pred             CCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHH
Q psy903           29 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAA  108 (739)
Q Consensus        29 ~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (739)
                      .+|+||||.|+..|+.+++++|+++|++++..+...|.||||+|+.                                  
T Consensus         3 ~~g~~~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~----------------------------------   48 (285)
T 1wdy_A            3 VEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQ----------------------------------   48 (285)
T ss_dssp             HHHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHH----------------------------------
T ss_pred             cccchHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCcHHHHHHH----------------------------------
Confidence            4688999999999999999999999999987744444466666554                                  


Q ss_pred             HHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCC
Q psy903          109 AALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIK  188 (739)
Q Consensus       109 ~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~  188 (739)
                                              .|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+..
T Consensus        49 ------------------------~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~  104 (285)
T 1wdy_A           49 ------------------------MSREDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFY  104 (285)
T ss_dssp             ------------------------TTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTT
T ss_pred             ------------------------cCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCcc
Confidence                                    45789999999999999999999999999999999999999999999999877655


Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCC----------CCCCCcHHHHHHhcCcHHHHHHHHHC-CCCCCCCCCCCC
Q psy903          189 GECTPLMEAASSGFIEIVRLLINHGADVNGQ----------SSSGNTPLMYACAGGHEAVVRVLLEC-GANVEDHNENGH  257 (739)
Q Consensus       189 ~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~  257 (739)
                       |.||||+|+..|+.+++++|+++|++++..          +..|.||||+|+..|+.+++++|++. |++++..+..|.
T Consensus       105 -g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~  183 (285)
T 1wdy_A          105 -GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR  183 (285)
T ss_dssp             -CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSC
T ss_pred             -cCCHHHHHHHhCCHHHHHHHHHhCCCcccccccHHHHHhhccCCCcHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCC
Confidence             569999999999999999999999999887          78899999999999999999999997 999999999999


Q ss_pred             cHHHHHHhcCC----hHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCcCCcHHHHHHh
Q psy903          258 TPLMEAASAGH----VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS-AGADQEHKTDEMHTALMEASM  332 (739)
Q Consensus       258 t~L~~A~~~~~----~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~~l~~a~~  332 (739)
                      ||||+|+..++    .+++++|+++|.+++.. +..|.||||+|+..|+.+++++|++ .|++++..+..|.|||++|+.
T Consensus       184 t~l~~a~~~~~~~~~~~i~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~~~~g~t~l~~A~~  262 (285)
T 1wdy_A          184 NALIHALLSSDDSDVEAITHLLLDHGADVNVR-GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVE  262 (285)
T ss_dssp             CHHHHHHHCSCTTTHHHHHHHHHHTTCCSSCC-CTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHH
T ss_pred             CHHHHHHHccccchHHHHHHHHHHcCCCCCCc-CCCCCcHHHHHHHcCCHHHHHHHHhccCCCccccCCCCCcHHHHHHH
Confidence            99999999999    99999999999998875 4559999999999999999999999 899999999999999999999


Q ss_pred             CCchHHHHHHHHcCCCch
Q psy903          333 DGHVEVAKLLLDSGAQSV  350 (739)
Q Consensus       333 ~~~~~~~~~L~~~~~~~~  350 (739)
                      .++.+++++|+++|+++.
T Consensus       263 ~~~~~i~~~Ll~~Ga~~~  280 (285)
T 1wdy_A          263 LKLKKIAELLCKRGASTD  280 (285)
T ss_dssp             TTCHHHHHHHHHHSSCSC
T ss_pred             cCcHHHHHHHHHcCCCCC
Confidence            999999999999998864

>3utm_A Tankyrase-1; tankyrase, TNKS, ankryin repeat clusters, WNT signaling, POL ribosylation, transferase-signaling protein complex; 2.00A {Mus musculus}

Probab=100.00  E-value=1.2e-40  Score=334.71  Aligned_cols=324  Identities=25%  Similarity=0.259  Sum_probs=267.8

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903          123 NERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG  201 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~  201 (739)
                      +.++|+.|+..|+.+.++.|+.. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|
T Consensus        24 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~g  102 (351)
T 3utm_A           24 KKDELLEAARSGNEEKLMALLTPLNVNCHASDGRKSTPLHLAAGYNRVRIVQLLLQHGADVHAKDKG-GLVPLHNACSYG  102 (351)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHCCTTTTTCCCSSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHTT
T ss_pred             cchhHHHHHHcCCHHHHHHHHHhcCCCcccCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCcHHHHHHHCC
Confidence            46889999999999999999976 8899999999999999999999999999999999998877654 579999999999


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903          202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG  281 (739)
Q Consensus       202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~  281 (739)
                      +.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++..+..|.+|++.|+..+..+.+.+....   
T Consensus       103 ~~~iv~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~~~l~~a~~~~~~~~~~~~~~~---  179 (351)
T 3utm_A          103 HYEVTELLLKHGACVNAMDLWQFTPLHEAASKNRVEVCSLLLSHGADPTLVNCHGKSAVDMAPTPELRERLTYEFKG---  179 (351)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCSSHHHHHHHHHHHHH---
T ss_pred             CHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCcchHHHhhhhhHHHHHhhhcc---
Confidence            99999999999999999999999999999999999999999999999999999999999999988888888877643   


Q ss_pred             CcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCC
Q psy903          282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPN  361 (739)
Q Consensus       282 ~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~  361 (739)
                                .++..++..++.+.++.++..+......+..+.+||++|+..++.                         
T Consensus       180 ----------~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~t~L~~A~~~~~~-------------------------  224 (351)
T 3utm_A          180 ----------HSLLQAAREADLAKVKKTLALEIINFKQPQSHETALHCAVASLHP-------------------------  224 (351)
T ss_dssp             ----------HHHHHHHHTTCHHHHHHHTTTCCTTCCCTTTCCCHHHHHHHCCST-------------------------
T ss_pred             ----------cHHHHHHHhccHHHHHHHHHhhcccccCCCCCCCHHHHHHHHhCc-------------------------
Confidence                      578888899999999999888776666777888999998887432                         


Q ss_pred             CCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCC
Q psy903          362 DKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGE  441 (739)
Q Consensus       362 ~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~  441 (739)
                                             +..+++++|++.|.+++..+..|.||||+|+..++.+++++|+++|++++..+    
T Consensus       225 -----------------------~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~n~~d----  277 (351)
T 3utm_A          225 -----------------------KRKQVAELLLRKGANVNEKNKDFMTPLHVAAERAHNDVMEVLHKHGAKMNALD----  277 (351)
T ss_dssp             -----------------------THHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCC----
T ss_pred             -----------------------cHHHHHHHHHHcCCCcCCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcC----
Confidence                                   11244455555666677888999999999999999999999999887765443    


Q ss_pred             CcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHc
Q psy903          442 CTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKN  521 (739)
Q Consensus       442 ~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~  521 (739)
                                                                                                      
T Consensus       278 --------------------------------------------------------------------------------  277 (351)
T 3utm_A          278 --------------------------------------------------------------------------------  277 (351)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCC--CCCcHHHHHHH
Q psy903          522 GANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL--DNSTMLIEAAK  599 (739)
Q Consensus       522 ~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~--~~~~~l~~A~~  599 (739)
                           ..|.||||+|+..|+.+++++|+++|++++.+|..|.||+++|    ..+++++|.+.+...  +..+++..|++
T Consensus       278 -----~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~~~~g~tal~~a----~~~~~~~l~~~~~~~~~~~~~~l~~A~~  348 (351)
T 3utm_A          278 -----SLGQTALHRAALAGHLQTCRLLLSYGSDPSIISLQGFTAAQMG----NEAVQQILSESTPMRTSDVDYRLLEASK  348 (351)
T ss_dssp             -----TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHS----CHHHHHHHHHC-----------------
T ss_pred             -----CCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCChhhhh----hHHHHHHHHhccccccCcceeehhhhhc
Confidence                 2367899999999999999999999999999999999999997    567888888776543  34556666665


Q ss_pred             cC
Q psy903          600 GG  601 (739)
Q Consensus       600 ~~  601 (739)
                      .|
T Consensus       349 ~g  350 (351)
T 3utm_A          349 AG  350 (351)
T ss_dssp             --
T ss_pred             cC
Confidence            54

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=5.5e-40  Score=316.04  Aligned_cols=252  Identities=25%  Similarity=0.326  Sum_probs=199.1

Q ss_pred             ChhhhhhcCCHHHHHHHHHcC-----------CCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchh
Q psy903            1 SLVQACSDGDVKTVKKLLTEG-----------RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPL   69 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g-----------~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l   69 (739)
                      +||.|+..|+.+.+..++..+           ..++..|..|+||||+|+..|+.+++++|++.|++++..+..|. |||
T Consensus        18 ~lH~Aa~~g~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L   96 (285)
T 3d9h_A           18 GSHMASMDGKQGGMDGSKPAGPRDFPGIRLLSNPLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHV-SPL   96 (285)
T ss_dssp             ------------------------CCSEECCCCTTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCC-CHH
T ss_pred             HHHHHhhcCCCCCcccCCCCccccccchhhhhCcccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCC-CHH
Confidence            589999999988888876643           23567889999999999999999999999999999988877665 776


Q ss_pred             HHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC
Q psy903           70 MEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSV  149 (739)
Q Consensus        70 ~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~  149 (739)
                      |+|+..                                                          |+.+++++|++.|+++
T Consensus        97 ~~A~~~----------------------------------------------------------g~~~~v~~Ll~~ga~~  118 (285)
T 3d9h_A           97 HEACLG----------------------------------------------------------GHLSCVKILLKHGAQV  118 (285)
T ss_dssp             HHHHHT----------------------------------------------------------TCHHHHHHHHHTTCCS
T ss_pred             HHHHHC----------------------------------------------------------CcHHHHHHHHHCCCCC
Confidence            666654                                                          4789999999999999


Q ss_pred             CcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy903          150 HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMY  229 (739)
Q Consensus       150 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~  229 (739)
                      +..+..|.||||+|+..|+.+++++|++.|++++....  |.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus       119 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~--g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~  196 (285)
T 3d9h_A          119 NGVTADWHTPLFNACVSGSWDCVNLLLQHGASVQPESD--LASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYL  196 (285)
T ss_dssp             SCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCSCT--TSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHH
T ss_pred             CCCCCCCCCHHHHHHHcCHHHHHHHHHHCCCCCCCCCC--CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHH
Confidence            99999999999999999999999999999998875433  6799999999999999999999999999999999999999


Q ss_pred             HHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHH
Q psy903          230 ACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL  309 (739)
Q Consensus       230 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L  309 (739)
                      |+..|+.+++++|+++|++++. +..|.||||+|+..++.+++++|+++|++++.. +..|.|||++|+  ++.+++++|
T Consensus       197 A~~~~~~~~v~~Ll~~ga~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~-d~~g~t~l~~A~--~~~~~~~~L  272 (285)
T 3d9h_A          197 ACENQQRACVKKLLESGADVNQ-GKGQDSPLHAVVRTASEELACLLMDFGADTQAK-NAEGKRPVELVP--PESPLAQLF  272 (285)
T ss_dssp             HHHTTCHHHHHHHHHTTCCTTC-CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCGGGGSC--TTSHHHHHH
T ss_pred             HHHcCcHHHHHHHHHCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHhc--CccHHHHHH
Confidence            9999999999999999999884 888999999999999999999999999888764 445889999988  456889999


Q ss_pred             HHc-CCCCC
Q psy903          310 LSA-GADQE  317 (739)
Q Consensus       310 l~~-~~~~~  317 (739)
                      +++ |+++.
T Consensus       273 l~~~~a~l~  281 (285)
T 3d9h_A          273 LEREGASLP  281 (285)
T ss_dssp             HHHC-----
T ss_pred             HHhhccCCC
Confidence            887 65554

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=2.4e-40  Score=331.89  Aligned_cols=308  Identities=19%  Similarity=0.229  Sum_probs=217.1

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      ||+.|+..|+.+.++.+++....+.    .-++++.-+...|+++++++++....+     ..+ .||||.|+..+. ++
T Consensus        40 ~l~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~g~~~~~~~~~~~~~~-----~~g-~t~L~~Aa~~~~-~~  108 (373)
T 2fo1_E           40 SLLEASYDGYIKRQRNELQHYSLYP----NPQGYGNGNDFLGDFNHTNLQIPTEPE-----PES-PIKLHTEAAGSY-AI  108 (373)
T ss_dssp             ---------------------------------------------------------------C-CCHHHHHHHSSS-CC
T ss_pred             ccccccCCccccchhhhhhhhcccc----CccccCCCCCccccccccccccccCCC-----CCC-ccHHHHHhcCCc-hH
Confidence            5778888889898888887655443    223456667777888888777665432     233 488888877553 33


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCC-CCCchHHHHHHHcCCHHHHHHHH--------hcCCCCCc
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPR-PQNERSLVQACSDGDVKTVKKLL--------TEGRSVHE  151 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~l~~A~~~~~~~~~~~ll--------~~~~~~~~  151 (739)
                      +..+..            .               .....+ ..+.|+||.|+..|+.+++++|+        +.|++++.
T Consensus       109 ~~~L~~------------~---------------~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~vn~  161 (373)
T 2fo1_E          109 TEPITR------------E---------------SVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNA  161 (373)
T ss_dssp             CSCCST------------T---------------TTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTC
T ss_pred             HHHhcc------------c---------------cccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCCcC
Confidence            221111            0               001122 45678888888888877666665        89999999


Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCC---CCCCCCCCCCCcHHH
Q psy903          152 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG---ADVNGQSSSGNTPLM  228 (739)
Q Consensus       152 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g---~~~~~~~~~~~t~L~  228 (739)
                      .|..|.||||+|+..|+.++|++|+++|++++..+.. |.||||+|+..|+.+++++|++++   ++++..+..|.||||
T Consensus       162 ~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~-g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~L~  240 (373)
T 2fo1_E          162 MDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS-ERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALM  240 (373)
T ss_dssp             CCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-CCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCHHH
T ss_pred             CCCCCCCHHHHHHHcChHHHHHHHHHCCCCCcccCCC-CCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCHHH
Confidence            9999999999999999999999999999999877654 569999999999999999999988   899999999999999


Q ss_pred             HHHhcC---cHHHHHHHHHCCCCCCC--------CCCCCCcHHHHHHhcCChHHHHHHHHcC-CCCcccCcCccCCHHHH
Q psy903          229 YACAGG---HEAVVRVLLECGANVED--------HNENGHTPLMEAASAGHVGVAKILLEYG-AGINTHSNEFKESALTL  296 (739)
Q Consensus       229 ~A~~~~---~~~~v~~Ll~~~~~~~~--------~~~~~~t~L~~A~~~~~~~ii~~Ll~~~-~~~~~~~~~~~~~~l~~  296 (739)
                      +|+..+   +.+++++|+++|++++.        .+..|.||||+|+..|+.+++++|++++ .+++.. +..|.||||+
T Consensus       241 ~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~-d~~g~TpL~~  319 (373)
T 2fo1_E          241 IVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQ-DEDGKTPIML  319 (373)
T ss_dssp             HHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCC-CTTCCCHHHH
T ss_pred             HHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCc-CCCCCCHHHH
Confidence            999998   89999999999999876        5778999999999999999999999886 777664 5569999999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCC
Q psy903          297 ACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQ  348 (739)
Q Consensus       297 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~  348 (739)
                      |+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++++++
T Consensus       320 A~~~g~~~iv~~Ll~~gad~~~~d~~g~t~l~~A~~~g~~~iv~~Ll~~~a~  371 (373)
T 2fo1_E          320 AAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRCRPE  371 (373)
T ss_dssp             HHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTTC--
T ss_pred             HHHcCCHHHHHHHHHcCCCccCCCCCCCCHHHHHHHcCCHHHHHHHHhcCcc
Confidence            9999999999999999999999999999999999999999999999998764

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=2e-39  Score=307.07  Aligned_cols=231  Identities=27%  Similarity=0.296  Sum_probs=145.3

Q ss_pred             CCCcccCCCCCcHHHHHHhcC-------------cHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCC
Q psy903           22 RSVHETTDEGESLLSLACSAG-------------YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLA   88 (739)
Q Consensus        22 ~~~~~~~~~g~t~L~~A~~~~-------------~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~   88 (739)
                      .++|.+|.+|+||||+|+..|             +.+++++|+++|++++...+..|.||||+|+.              
T Consensus         1 ~dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~--------------   66 (253)
T 1yyh_A            1 MDVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAAR--------------   66 (253)
T ss_dssp             ---------------------------------------------------CCCTTSCCHHHHHHH--------------
T ss_pred             CCCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHH--------------
Confidence            367889999999999999988             78888888888887765433333355555544              


Q ss_pred             CHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCc
Q psy903           89 DPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY  168 (739)
Q Consensus        89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~  168 (739)
                                                                  .|+.+++++|++.|++++..+..|.||||+|+..|+
T Consensus        67 --------------------------------------------~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~  102 (253)
T 1yyh_A           67 --------------------------------------------YSRSDAAKRLLEASADANIQDNMGRTPLHAAVSADA  102 (253)
T ss_dssp             --------------------------------------------TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTC
T ss_pred             --------------------------------------------cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCC
Confidence                                                        446778888888888888888888888888888888


Q ss_pred             HHHHHHHHhCCC-CccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCC
Q psy903          169 YELAQVLLAMHA-NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA  247 (739)
Q Consensus       169 ~~~v~~Ll~~~~-~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~  247 (739)
                      .+++++|++.++ +++.. +..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|+
T Consensus       103 ~~~v~~Ll~~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga  181 (253)
T 1yyh_A          103 QGVFQILIRNRATDLDAR-MHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGA  181 (253)
T ss_dssp             HHHHHHHHHSTTSCTTCC-CTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTC
T ss_pred             HHHHHHHHHcCCCCcccc-CCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence            888888888876 44433 3445688888888888888888888888888888888888888888888888888888888


Q ss_pred             CCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHc
Q psy903          248 NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA  312 (739)
Q Consensus       248 ~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~  312 (739)
                      +++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+..|+.+++++|...
T Consensus       182 ~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~-d~~g~tpl~~A~~~g~~~i~~~l~~~  245 (253)
T 1yyh_A          182 NKDMQNNREETPLFLAAREGSYETAKVLLDHFANRDIT-DHMDRLPRDIAQERMHHDIVRLLDLE  245 (253)
T ss_dssp             CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHC-
T ss_pred             CCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccc-ccCCCCHHHHHHHcCCHHHHHHHHHH
Confidence            88888888888888888888888888888888777654 44577888888888888888877754

>3d9h_A CDNA FLJ77766, highly similar to HOMO sapiens ankyrin repeat and SOCS box-containing...; ASB9, ANK repeat, L-shaped, structural protein; 2.20A {Homo sapiens}

Probab=100.00  E-value=6.5e-39  Score=308.58  Aligned_cols=267  Identities=24%  Similarity=0.268  Sum_probs=207.9

Q ss_pred             CCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHH
Q psy903           28 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEA  107 (739)
Q Consensus        28 ~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (739)
                      ...|+|+||+|+..|+.+.+..++..+.+-...      ..+   ...                                
T Consensus        12 ~~~~~~~lH~Aa~~g~~~~~~~~~~~~~~~~~~------~~l---~~~--------------------------------   50 (285)
T 3d9h_A           12 SGLVPRGSHMASMDGKQGGMDGSKPAGPRDFPG------IRL---LSN--------------------------------   50 (285)
T ss_dssp             ------------------------------CCS------EEC---CCC--------------------------------
T ss_pred             chHHHHHHHHHhhcCCCCCcccCCCCccccccc------hhh---hhC--------------------------------
Confidence            457999999999999988888887765431100      000   000                                


Q ss_pred             HHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCC
Q psy903          108 AAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI  187 (739)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~  187 (739)
                             ........+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+.
T Consensus        51 -------~~~~~~~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~  123 (285)
T 3d9h_A           51 -------PLMGDAVSDWSPMHEAAIHGHQLSLRNLISQGWAVNIITADHVSPLHEACLGGHLSCVKILLKHGAQVNGVTA  123 (285)
T ss_dssp             -------TTCSSSCCSCCHHHHHHHTTCHHHHHHHHHTTCCSCEECTTCCCHHHHHHHTTCHHHHHHHHHTTCCSSCCCT
T ss_pred             -------cccCCCccCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHCCcHHHHHHHHHCCCCCCCCCC
Confidence                   0012345567888888889999999999999999999999999999999999999999999999999987765


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          188 KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG  267 (739)
Q Consensus       188 ~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~  267 (739)
                      . |.||||+|+..|+.+++++|+++|++++..+ .|.||||+|+..|+.+++++|+++|++++..|..|.||||+|+..|
T Consensus       124 ~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~-~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~  201 (285)
T 3d9h_A          124 D-WHTPLFNACVSGSWDCVNLLLQHGASVQPES-DLASPIHEAARRGHVECVNSLIAYGGNIDHKISHLGTPLYLACENQ  201 (285)
T ss_dssp             T-CCCHHHHHHHHTCHHHHHHHHHTTCCSSCSC-TTSCHHHHHHHHTCHHHHHHHHHTTCCTTCCBTTTBCHHHHHHHTT
T ss_pred             C-CCCHHHHHHHcCHHHHHHHHHHCCCCCCCCC-CCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcC
Confidence            5 4699999999999999999999999998654 5999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHc-C
Q psy903          268 HVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS-G  346 (739)
Q Consensus       268 ~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~-~  346 (739)
                      +.+++++|+++|++++.  +..|.||||+|+..++.+++++|++.|++++.++..|.|||++|+  ++.+++++|+++ +
T Consensus       202 ~~~~v~~Ll~~ga~~~~--~~~g~t~L~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~t~l~~A~--~~~~~~~~Ll~~~~  277 (285)
T 3d9h_A          202 QRACVKKLLESGADVNQ--GKGQDSPLHAVVRTASEELACLLMDFGADTQAKNAEGKRPVELVP--PESPLAQLFLEREG  277 (285)
T ss_dssp             CHHHHHHHHHTTCCTTC--CBTTBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGSC--TTSHHHHHHHHHC-
T ss_pred             cHHHHHHHHHCCCCCCC--CCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHhc--CccHHHHHHHHhhc
Confidence            99999999999999884  566999999999999999999999999999999999999999998  567999999998 4


Q ss_pred             CC
Q psy903          347 AQ  348 (739)
Q Consensus       347 ~~  348 (739)
                      ++
T Consensus       278 a~  279 (285)
T 3d9h_A          278 AS  279 (285)
T ss_dssp             --
T ss_pred             cC
Confidence            44

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=2e-39  Score=326.05  Aligned_cols=262  Identities=19%  Similarity=0.185  Sum_probs=197.2

Q ss_pred             CcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhch
Q psy903           24 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCA  103 (739)
Q Consensus        24 ~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (739)
                      .+..|.+|+||||+|+..|+.++|++|+++|++++..+..+. ||||+|+..|            +.++++.|.....  
T Consensus        13 ~~~~d~~g~t~L~~Aa~~g~~~~v~~Ll~~g~~~~~~d~~g~-t~L~~A~~~g------------~~~~v~~Ll~~g~--   77 (364)
T 3ljn_A           13 RIKSDDENMEKIHVAARKGQTDEVRRLIETGVSPTIQNRFGC-TALHLACKFG------------CVDTAKYLASVGE--   77 (364)
T ss_dssp             ---CCHHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCC-CHHHHHHHHC------------CHHHHHHHHHHCC--
T ss_pred             ccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC-cHHHHHHHcC------------CHHHHHHHHHCCC--
Confidence            344455555555555555555555555555555555554443 5555555555            4444444443322  


Q ss_pred             HHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhc----CCCCCc-----------------CCCCCCcHHHH
Q psy903          104 LDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTE----GRSVHE-----------------TTDEGESLLSL  162 (739)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~----~~~~~~-----------------~~~~g~t~L~~  162 (739)
                                   ......+.|+|+.|+..|+.+++++|++.    |.+++.                 .+..|.||||+
T Consensus        78 -------------~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~  144 (364)
T 3ljn_A           78 -------------VHSLWHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKHCKGQTALHW  144 (364)
T ss_dssp             -------------CCCCBTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEEESCCCHHHH
T ss_pred             -------------CccccCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCCCCCCCHHHH
Confidence                         11112456677777777788888888887    777666                 88899999999


Q ss_pred             HHHcC--cHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC-----CCCCCCCCCcHHHHHHhcCc
Q psy903          163 ACSAG--YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGAD-----VNGQSSSGNTPLMYACAGGH  235 (739)
Q Consensus       163 A~~~~--~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~-----~~~~~~~~~t~L~~A~~~~~  235 (739)
                      |+..|  +.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++     ++.++..|.||||+|+..|+
T Consensus       145 A~~~g~~~~~~v~~Ll~~ga~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~g~  223 (364)
T 3ljn_A          145 CVGLGPEYLEMIKILVQLGASPTAKDKA-DETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILINW  223 (364)
T ss_dssp             HHHSCGGGHHHHHHHHHHTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTTTC
T ss_pred             HHHcCCchHHHHHHHHHcCCCCcccCCC-CCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHcCC
Confidence            99999  999999999999999877654 56999999999999999999999998     99999999999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCccc-----------CcCccCCHHHHHHHcCCHH
Q psy903          236 EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTH-----------SNEFKESALTLACYKGHLD  304 (739)
Q Consensus       236 ~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~-----------~~~~~~~~l~~A~~~~~~~  304 (739)
                      .+++++|+++|++++..|..|.|||++|+..|+.+++++|+++|++....           .+..+.++++.|+..++.+
T Consensus       224 ~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~aa~~~~~~  303 (364)
T 3ljn_A          224 EDVAMRFVEMGIDVNMEDNEHTVPLYLSVRAAMVLLTKELLQKTDVFLIQACPYHNGTTVLPDRVVWLDFVPAAADPSKQ  303 (364)
T ss_dssp             HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTCCHHHHHHHHHHSCHHHHHTCTTBSSSSBCGGGCCCCTTSCSSCCHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHhChHHHHHHHHHcCCchhhhcCcccCcccccccccccccchhhhhccCHH
Confidence            99999999999999999999999999999999999999999987654221           2334567777777777666


Q ss_pred             HHHHHHHcCC
Q psy903          305 MVRFLLSAGA  314 (739)
Q Consensus       305 ~v~~Ll~~~~  314 (739)
                      .+..|+..+.
T Consensus       304 ~v~~ll~~~~  313 (364)
T 3ljn_A          304 EVLQLLQEKL  313 (364)
T ss_dssp             HHHHHHHHHH
T ss_pred             HHHHHHHHHH
Confidence            6666665543

>3ljn_A Hypothetical protein; ankyrin, structural genomics, PSI, structural genomics of pathogenic protozoa consortium, SGPP, ANK repeat; 2.90A {Leishmania major}

Probab=100.00  E-value=4.5e-39  Score=323.40  Aligned_cols=230  Identities=21%  Similarity=0.223  Sum_probs=115.6

Q ss_pred             ccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcC
Q psy903           55 ANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDG  134 (739)
Q Consensus        55 a~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~  134 (739)
                      .+.+..|..+. ||||+|+..|            +.++++.+.+....             .......+.|+|+.|+..|
T Consensus        11 ~~~~~~d~~g~-t~L~~Aa~~g------------~~~~v~~Ll~~g~~-------------~~~~d~~g~t~L~~A~~~g   64 (364)
T 3ljn_A           11 LNRIKSDDENM-EKIHVAARKG------------QTDEVRRLIETGVS-------------PTIQNRFGCTALHLACKFG   64 (364)
T ss_dssp             -----CCHHHH-HHHHHHHHHT------------CHHHHHHHHHTTCC-------------TTCCCTTCCCHHHHHHHHC
T ss_pred             CCccccCCCCC-CHHHHHHHcC------------CHHHHHHHHHcCCC-------------ccccCCCCCcHHHHHHHcC
Confidence            34555666665 9999999888            44444444433211             1122334455555555555


Q ss_pred             CHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhC----CCCccc-----------------cCCCCCCcH
Q psy903          135 DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM----HANVED-----------------RGIKGECTP  193 (739)
Q Consensus       135 ~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~----~~~~~~-----------------~~~~~~~t~  193 (739)
                      +.+++++|++.|++++.  ..|.||||+|+..|+.+++++|++.    +.+++.                 .+ ..|.||
T Consensus        65 ~~~~v~~Ll~~g~~~~~--~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~g~t~  141 (364)
T 3ljn_A           65 CVDTAKYLASVGEVHSL--WHGQKPIHLAVMANKTDLVVALVEGAKERGQMPESLLNECDEREVNEIGSHVKH-CKGQTA  141 (364)
T ss_dssp             CHHHHHHHHHHCCCCCC--BTTBCHHHHHHHTTCHHHHHHHHHHHHHHTCCHHHHHTCCCCCCEEEETTEEEE-ESCCCH
T ss_pred             CHHHHHHHHHCCCCccc--cCCCCHHHHHHHcCCHHHHHHHHHhccccCCCHHHHHhhcchHhhhhhccccCC-CCCCCH
Confidence            55555555555543322  2445555555555555555555554    443332                 11 223355


Q ss_pred             HHHHHHcC--cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCC-----CCCCCCCCCcHHHHHHhc
Q psy903          194 LMEAASSG--FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN-----VEDHNENGHTPLMEAASA  266 (739)
Q Consensus       194 L~~A~~~~--~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~~~t~L~~A~~~  266 (739)
                      ||+|+..|  +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++     ++..|..|.||||+|+..
T Consensus       142 L~~A~~~g~~~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~g~t~L~~A~~~  221 (364)
T 3ljn_A          142 LHWCVGLGPEYLEMIKILVQLGASPTAKDKADETPLMRAMEFRNREALDLMMDTVPSKSSLRLDYANKQGNSHLHWAILI  221 (364)
T ss_dssp             HHHHHHSCGGGHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCSCSSSCCTTCCCTTCCCTTHHHHTT
T ss_pred             HHHHHHcCCchHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHhcccccccccccccCCCCCcHHHHHHHc
Confidence            55555555  55555555555555555555555555555555555555555555544     555555555555555555


Q ss_pred             CChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCC
Q psy903          267 GHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA  314 (739)
Q Consensus       267 ~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~  314 (739)
                      |+.+++++|+++|++++.. +..|.|||++|+..|+.+++++|+++|+
T Consensus       222 g~~~~v~~Ll~~gad~~~~-d~~g~tpL~~A~~~g~~~~v~~Ll~~~~  268 (364)
T 3ljn_A          222 NWEDVAMRFVEMGIDVNME-DNEHTVPLYLSVRAAMVLLTKELLQKTD  268 (364)
T ss_dssp             TCHHHHHHHHTTTCCTTCC-CTTSCCHHHHHHHTCCHHHHHHHHHHSC
T ss_pred             CCHHHHHHHHHcCCCCCCC-CCCCCCHHHHHHHhChHHHHHHHHHcCC
Confidence            5555555555555554432 2335555555555555555555555543

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=1e-38  Score=306.95  Aligned_cols=248  Identities=17%  Similarity=0.169  Sum_probs=221.5

Q ss_pred             hhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccC
Q psy903            4 QACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATG   83 (739)
Q Consensus         4 ~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~   83 (739)
                      .++...+.+.|..||..+ +++.+|..|+||||+|+..|+.++|++|+++|++++..+   |.||||+|+..|       
T Consensus         5 s~i~~~~~~~v~~lL~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---g~t~L~~A~~~g-------   73 (285)
T 3kea_A            5 SRINTWKSKQLKSFLSSK-DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE---NEFPLHQAATLE-------   73 (285)
T ss_dssp             TTGGGCCHHHHHHHHHST-TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT---TCCHHHHHTTSS-------
T ss_pred             HHHHhcCHHHHHHHHHhC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC---CCCHHHHHHHcC-------
Confidence            457788888888888875 789999999999999999999999999999999998774   347777777655       


Q ss_pred             CCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHH
Q psy903           84 DGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLA  163 (739)
Q Consensus        84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A  163 (739)
                                                                         +.+++++|++.|++++..+..|.||||+|
T Consensus        74 ---------------------------------------------------~~~~v~~Ll~~ga~~~~~d~~g~t~L~~A  102 (285)
T 3kea_A           74 ---------------------------------------------------DTKIVKILLFSGLDDSQFDDKGNTALYYA  102 (285)
T ss_dssp             ---------------------------------------------------SCHHHHHHHHTTCCTTCCCTTSCCHHHHH
T ss_pred             ---------------------------------------------------CHHHHHHHHHCCCCCCCcCCCCCcHHHHH
Confidence                                                               68899999999999999999999999999


Q ss_pred             HHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHH
Q psy903          164 CSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL  243 (739)
Q Consensus       164 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll  243 (739)
                      +..|+.+++++|+++|++++..+..++.||||+|+..|+.+++++|+++|++.... ..|.||||+|+..|+.+++++|+
T Consensus       103 ~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~g~t~L~~A~~~g~~~~v~~Ll  181 (285)
T 3kea_A          103 VDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL-AILLSCIHITIKNGHVDMMILLL  181 (285)
T ss_dssp             HHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC-STHHHHHHHHHHTTCHHHHHHHH
T ss_pred             HHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc-cCCccHHHHHHHcChHHHHHHHH
Confidence            99999999999999999998877666469999999999999999999999877322 28899999999999999999999


Q ss_pred             HCCCCCCCCCCCCCcH-HHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCc
Q psy903          244 ECGANVEDHNENGHTP-LMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDE  322 (739)
Q Consensus       244 ~~~~~~~~~~~~~~t~-L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~  322 (739)
                      ++|++++.++..|.|| ||+|+..|+.+++++|+++|++++...        +.|+..|+.+++++|+++|+++......
T Consensus       182 ~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~~~~--------~~a~~~~~~~iv~~Ll~~g~~~~~~~~~  253 (285)
T 3kea_A          182 DYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIYSAN--------LENVLLDDAEIAKMIIEKHVEYKSDSYT  253 (285)
T ss_dssp             HHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCSTTTT--------GGGGTTTCHHHHHHHHHHHHHHTTCTTT
T ss_pred             HcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCCCCC--------hhhhhcCCHHHHHHHHHcCCCCCCcccc
Confidence            9999999999999998 999999999999999999999987754        2567899999999999999887655443

>2fo1_E LIN-12 protein; beta-barrel, protein-DNA complex, double helix, ankyrin repeat, gene regulation/signalling protein/DNA complex; 3.12A {Caenorhabditis elegans} SCOP: d.211.1.1

Probab=100.00  E-value=9.3e-39  Score=320.36  Aligned_cols=311  Identities=21%  Similarity=0.231  Sum_probs=200.3

Q ss_pred             CcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHH
Q psy903           32 ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAAL  111 (739)
Q Consensus        32 ~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  111 (739)
                      ..+|.-|+..|+.+.+..++++...+...     .+++.-+...|..            +....+               
T Consensus        38 ~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~~g~~------------~~~~~~---------------   85 (373)
T 2fo1_E           38 QHSLLEASYDGYIKRQRNELQHYSLYPNP-----QGYGNGNDFLGDF------------NHTNLQ---------------   85 (373)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             ccccccccCCccccchhhhhhhhccccCc-----cccCCCCCccccc------------cccccc---------------
Confidence            34677788888999999888877665311     1444444444421            111111               


Q ss_pred             HhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCC-CCCCcHHHHHHHcCcHHHHHHHH--------hCCCCc
Q psy903          112 TRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETT-DEGESLLSLACSAGYYELAQVLL--------AMHANV  182 (739)
Q Consensus       112 ~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~-~~g~t~L~~A~~~~~~~~v~~Ll--------~~~~~~  182 (739)
                         ....+...+.|+||.|+..+. +++++|+.  .+++..+ ..|.||||+|+..|+.+++++|+        +.|+++
T Consensus        86 ---~~~~~~~~g~t~L~~Aa~~~~-~~~~~L~~--~~~n~~d~~~g~t~Lh~Aa~~g~~~~v~~Ll~~~~~~ll~~ga~v  159 (373)
T 2fo1_E           86 ---IPTEPEPESPIKLHTEAAGSY-AITEPITR--ESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADV  159 (373)
T ss_dssp             -----------CCCHHHHHHHSSS-CCCSCCST--TTTTTCCCSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCT
T ss_pred             ---cccCCCCCCccHHHHHhcCCc-hHHHHhcc--ccccccCCcCCCCHHHHHHHCCCHHHHHHHHHHHHHHHHhcCCCC
Confidence               122345667888888888554 67776654  4666677 67888888888888877776665        678887


Q ss_pred             cccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCC---CCCCCCCCCCCcH
Q psy903          183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG---ANVEDHNENGHTP  259 (739)
Q Consensus       183 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~---~~~~~~~~~~~t~  259 (739)
                      +..+.. |.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++++   ++++..+..|.||
T Consensus       160 n~~d~~-g~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~d~~g~t~  238 (373)
T 2fo1_E          160 NAMDCD-ENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTA  238 (373)
T ss_dssp             TCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHHHTTSCCCTTSCCH
T ss_pred             cCCCCC-CCCHHHHHHHcChHHHHHHHHHCCCCCcccCCCCCCHHHHHHHCCCHHHHHHHHhcCccccChhhcCCCCCCH
Confidence            766544 458888888888888888888888888888888888888888888888888888877   6788888888888


Q ss_pred             HHHHHhcC---ChHHHHHHHHcCCCCccc-------CcCccCCHHHHHHHcCCHHHHHHHHHcC-CCCCCCCCcCCcHHH
Q psy903          260 LMEAASAG---HVGVAKILLEYGAGINTH-------SNEFKESALTLACYKGHLDMVRFLLSAG-ADQEHKTDEMHTALM  328 (739)
Q Consensus       260 L~~A~~~~---~~~ii~~Ll~~~~~~~~~-------~~~~~~~~l~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~~l~  328 (739)
                      ||+|+..+   +.+++++|+++|++++..       .+..|.||||+|+..|+.+++++|++.+ ++++..+..|.|||+
T Consensus       239 L~~A~~~~~~~~~~~v~~Ll~~g~~~~~~~~~~~~~~d~~g~t~Lh~A~~~g~~~~v~~Ll~~~~~~~n~~d~~g~TpL~  318 (373)
T 2fo1_E          239 LMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIM  318 (373)
T ss_dssp             HHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTCCCTTCCCHHH
T ss_pred             HHHHHHhCCcchHHHHHHHHHCCCCcccccccccCcccccCCCHHHHHHHhCCHHHHHHHHHhcCCCccCcCCCCCCHHH
Confidence            88888877   788888888888777642       2345778888888888888888888765 788888888888888


Q ss_pred             HHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCC
Q psy903          329 EASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGE  408 (739)
Q Consensus       329 ~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~  408 (739)
                      +|+..|+.+++++|+++                                                   |++++..+..|.
T Consensus       319 ~A~~~g~~~iv~~Ll~~---------------------------------------------------gad~~~~d~~g~  347 (373)
T 2fo1_E          319 LAAQEGRIEVVMYLIQQ---------------------------------------------------GASVEAVDATDH  347 (373)
T ss_dssp             HHHHHTCHHHHHHHHHT---------------------------------------------------TCCSSCCCSSSC
T ss_pred             HHHHcCCHHHHHHHHHc---------------------------------------------------CCCccCCCCCCC
Confidence            88777777766666654                                                   445677889999


Q ss_pred             CHHHHHHHcCcHHHHHHHHHcCCC
Q psy903          409 SLLSLACSAGYYELAQVLLAMHAN  432 (739)
Q Consensus       409 t~l~~a~~~~~~~~v~~Ll~~~~~  432 (739)
                      |||++|+..++.+++++|++++++
T Consensus       348 t~l~~A~~~g~~~iv~~Ll~~~a~  371 (373)
T 2fo1_E          348 TARQLAQANNHHNIVDIFDRCRPE  371 (373)
T ss_dssp             CHHHHHHHTTCHHHHHHHHTTC--
T ss_pred             CHHHHHHHcCCHHHHHHHHhcCcc
Confidence            999999999999999999998765

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=3e-37  Score=290.06  Aligned_cols=229  Identities=26%  Similarity=0.375  Sum_probs=197.7

Q ss_pred             CCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhh
Q psy903           22 RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVS  101 (739)
Q Consensus        22 ~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (739)
                      .+++..|..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+.                           
T Consensus         2 ~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~---------------------------   53 (237)
T 3b7b_A            2 MNFKMEHQNKRSPLHAAAEAGHVDICHMLVQAGANIDTCSEDQR-TPLMEAAE---------------------------   53 (237)
T ss_dssp             CCCCCSSCCSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCC-CHHHHHHH---------------------------
T ss_pred             CCcccccCCCCCHHHHHHHcCcHHHHHHHHHcCCCcCccCCCCC-CHHHHHHH---------------------------
Confidence            56788999999999999999999999999999999987776554 66666554                           


Q ss_pred             chHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCC-C
Q psy903          102 CALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH-A  180 (739)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~-~  180 (739)
                                                     .|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.+ .
T Consensus        54 -------------------------------~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~  102 (237)
T 3b7b_A           54 -------------------------------NNHLEAVKYLIKAGALVDPKDAEGSTCLHLAAKKGHYEVVQYLLSNGQM  102 (237)
T ss_dssp             -------------------------------TTCHHHHHHHHTTTCCCCCCCTTSCCHHHHHHHTTCHHHHHHHHTTTCC
T ss_pred             -------------------------------hCCHHHHHHHHhCCCCCCCCCCCCCcHHHHHHHcCCHHHHHHHHhCCCC
Confidence                                           45789999999999999999999999999999999999999999998 5


Q ss_pred             CccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHH
Q psy903          181 NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPL  260 (739)
Q Consensus       181 ~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L  260 (739)
                      +++..+ ..|.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..|..|.|||
T Consensus       103 ~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L  181 (237)
T 3b7b_A          103 DVNCQD-DGGWTPMIWATEYKHVDLVKLLLSKGSDINIRDNEENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPL  181 (237)
T ss_dssp             CTTCCC-TTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHH
T ss_pred             CcccCC-CCCCCHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHH
Confidence            555444 4567999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903          261 MEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS  311 (739)
Q Consensus       261 ~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  311 (739)
                      |+|+..++.+++++|+++|++++.. +..|.|||++|+..++...+..+++
T Consensus       182 ~~A~~~~~~~~v~~Ll~~gad~~~~-d~~g~t~l~~A~~~~~~~~~~~l~~  231 (237)
T 3b7b_A          182 HIAARENRYDCVVLFLSRDSDVTLK-NKEGETPLQCASLNSQVWSALQMSK  231 (237)
T ss_dssp             HHHHHTTCHHHHHHHHTTTCCTTCC-CTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred             HHHHHhCCHhHHHHHHHcCCCCCcc-CCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            9999999999999999988888764 4558888888888888765555543

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=3.5e-38  Score=297.61  Aligned_cols=229  Identities=25%  Similarity=0.334  Sum_probs=172.1

Q ss_pred             cccCCCCCcHHHHHHhcCcHHHHHHHHH----ccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhh
Q psy903           25 HETTDEGESLLSLACSAGYYELAQVLLA----MHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSV  100 (739)
Q Consensus        25 ~~~~~~g~t~L~~A~~~~~~~iv~~Ll~----~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (739)
                      +.+|.+|+||||+|+..|+.+++++|++    .|++++..+..+. ||||+|+..|                        
T Consensus         3 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~-t~L~~A~~~~------------------------   57 (241)
T 1k1a_A            3 TRADEDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ-TPLHLAVITT------------------------   57 (241)
T ss_dssp             ----CTTCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSC-CHHHHHHHTT------------------------
T ss_pred             cccCCCCCcHHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCC-CHHHHHHHcC------------------------
Confidence            4577788888888888888888888886    6788887776665 8888877655                        


Q ss_pred             hchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy903          101 SCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA  180 (739)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~  180 (739)
                                                        +.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.++
T Consensus        58 ----------------------------------~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~  103 (241)
T 1k1a_A           58 ----------------------------------LPSVVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAA  103 (241)
T ss_dssp             ----------------------------------CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSC
T ss_pred             ----------------------------------CHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCC
Confidence                                              5677888888888888888888888888888888888888888776


Q ss_pred             ----CccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCC
Q psy903          181 ----NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS-SSGNTPLMYACAGGHEAVVRVLLECGANVEDHNEN  255 (739)
Q Consensus       181 ----~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~  255 (739)
                          +++..+ ..|.||||+|+..|+.+++++|+++|++++..+ ..|.||||+|+..|+.+++++|+++|++++..|..
T Consensus       104 ~~~~~~~~~~-~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~  182 (241)
T 1k1a_A          104 PGTLDLEARN-YDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYS  182 (241)
T ss_dssp             TTSCCTTCCC-TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTT
T ss_pred             CccccccccC-cCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC
Confidence                444433 344688888888888888888888888887777 67888888888888888888888888888888888


Q ss_pred             CCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCC
Q psy903          256 GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA  314 (739)
Q Consensus       256 ~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~  314 (739)
                      |.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+..++.++++.|.++++
T Consensus       183 g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~tpl~~A~~~~~~~i~~~l~~~~a  240 (241)
T 1k1a_A          183 GSSALHSASGRGLLPLVRTLVRSGADSSLK-NCHNDTPLMVARSRRVIDILRGKATRPA  240 (241)
T ss_dssp             SCBHHHHHHHHTCHHHHHHHHHTTCCTTCC-CTTSCCTTTTCSSHHHHHHHTC------
T ss_pred             CCCHHHHHHHcCCHHHHHHHHhcCCCCCCc-CCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence            888888888888888888888888877664 4457788888888888888887776653

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=8.5e-38  Score=292.53  Aligned_cols=220  Identities=28%  Similarity=0.371  Sum_probs=138.7

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCC-CCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGR-SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGK   79 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~-~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~   79 (739)
                      ||+.|+..|+++.|++|++.+. .++..|..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+..    
T Consensus         9 ~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~~----   83 (231)
T 3aji_A            9 MICNLAYSGKLDELKERILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGW-SPLHIAASA----   83 (231)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSC-CHHHHHHHH----
T ss_pred             hHHHHHHhCCHHHHHHHHHhchhhhhcCCCCCCCHHHHHHHcCcHHHHHHHHHhCCCCCCcCCCCC-CHHHHHHHc----
Confidence            3566666666666666666443 2455566666666666666666666666666666655554443 444444433    


Q ss_pred             cccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcH
Q psy903           80 LATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL  159 (739)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~  159 (739)
                                                                            |+.+++++|++.|++++..+..|.||
T Consensus        84 ------------------------------------------------------~~~~~v~~Ll~~g~~~~~~~~~g~t~  109 (231)
T 3aji_A           84 ------------------------------------------------------GXDEIVKALLVKGAHVNAVNQNGCTP  109 (231)
T ss_dssp             ------------------------------------------------------TCHHHHHHHHHTTCCTTCCCTTSCCH
T ss_pred             ------------------------------------------------------CHHHHHHHHHHcCCCCCCCCCCCCCH
Confidence                                                                  35566666666666666666666666


Q ss_pred             HHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHH
Q psy903          160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV  239 (739)
Q Consensus       160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v  239 (739)
                      ||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++
T Consensus       110 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v  188 (231)
T 3aji_A          110 LHYAASKNRHEIAVMLLEGGANPDAKDHY-DATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEERVEEA  188 (231)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCCCHHHH
Confidence            66666666666666666666666554433 34666666666666666666666666666666666666666666666666


Q ss_pred             HHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903          240 RVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA  280 (739)
Q Consensus       240 ~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~  280 (739)
                      ++|+++|++++.+|..|.|||++|+..++.+++++|.++|+
T Consensus       189 ~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~lL~~~~a  229 (231)
T 3aji_A          189 KFLVTQGASIYIENKEEKTPLQVAKGGLGLILKRLAEGEEA  229 (231)
T ss_dssp             HHHHHTTCCSCCCCTTSCCHHHHSCHHHHHHHHHHHHHHHH
T ss_pred             HHHHHCCCCCCCCCCCCCCHHHHHHhhHHHHHHHHHccccc
Confidence            66666666666666666666666666666666666666544

>1yyh_A HN1;, notch 1, ankyrin domain; ankyrin repeats, cell cycle,transcription; 1.90A {Homo sapiens} PDB: 2he0_A 2f8x_K 3nbn_B 3v79_K* 1ot8_A

Probab=100.00  E-value=1.9e-37  Score=293.60  Aligned_cols=197  Identities=26%  Similarity=0.340  Sum_probs=95.0

Q ss_pred             CCCcCCCCCCcHHHHHHHcC-------------cHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCC
Q psy903          148 SVHETTDEGESLLSLACSAG-------------YYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGA  214 (739)
Q Consensus       148 ~~~~~~~~g~t~L~~A~~~~-------------~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~  214 (739)
                      |+|.+|..|.||||+|+..|             +.+++++|++.|++++...+..|+||||+|+..|+.+++++|+++|+
T Consensus         2 dvn~~d~~g~tpL~~A~~~g~~~~~~~~~~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~   81 (253)
T 1yyh_A            2 DVNVRGPDGFTPLMIASCSGGGLETGNSEEEEDAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASA   81 (253)
T ss_dssp             --------------------------------------------------CCCTTSCCHHHHHHHTTCHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCcHHHHHHhccccccccchhhcCCChHHHHHHHHccCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCC
Confidence            44555556666666666544             56666666666665555444445566666666666666666666666


Q ss_pred             CCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCH
Q psy903          215 DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESA  293 (739)
Q Consensus       215 ~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~  293 (739)
                      +++.++..|.||||+|+..|+.+++++|+++++ +++..+..|.||||+|+..|+.+++++|+++|++++... ..|.||
T Consensus        82 ~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d-~~g~t~  160 (253)
T 1yyh_A           82 DANIQDNMGRTPLHAAVSADAQGVFQILIRNRATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVD-DLGKSA  160 (253)
T ss_dssp             CTTCCCTTSCCHHHHHHHHTCHHHHHHHHHSTTSCTTCCCTTCCCHHHHHHHHTCSSHHHHHHHTTCCTTCBC-TTSCBH
T ss_pred             CCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccccCCCCCcHHHHHHHcChHHHHHHHHHcCCCCCCcC-CCCCCH
Confidence            666666666666666666666666666666554 555556666666666666666666666666666555432 335566


Q ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHc
Q psy903          294 LTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS  345 (739)
Q Consensus       294 l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~  345 (739)
                      ||+|+..|+.+++++|++.|++++..+..|.|||++|+..++.+++++|+++
T Consensus       161 L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~  212 (253)
T 1yyh_A          161 LHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDH  212 (253)
T ss_dssp             HHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHT
T ss_pred             HHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHc
Confidence            6666666666666666666666666666666666665555555555544443

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=2e-38  Score=300.48  Aligned_cols=222  Identities=27%  Similarity=0.350  Sum_probs=158.7

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCC--------CcccCCCCCcHHHHHHhcCcHH-HHHHHHHccccccccCCCCCcchhHH
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRS--------VHETTDEGESLLSLACSAGYYE-LAQVLLAMHANVEDRGIKGECTPLME   71 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~--------~~~~~~~g~t~L~~A~~~~~~~-iv~~Ll~~ga~~~~~~~~~~~t~l~~   71 (739)
                      ||+.||..|++++|++||+.|++        ++..+..|.||||.|+..+..+ ++++|+++|++++..+..|. ||||+
T Consensus        14 ~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~-TpLh~   92 (269)
T 4b93_B           14 KLLRAVADGDLEMVRYLLEWTEEDLEDAEDTVSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGS-SPLHV   92 (269)
T ss_dssp             HHHHHHHTTCHHHHHHHHTCC----------------------------------------CCCCTTCCCTTSC-CHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCcccccccccccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCC-CHHHH
Confidence            58999999999999999988775        4556778899999999887654 78999999999988877665 77777


Q ss_pred             HhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCc
Q psy903           72 AASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHE  151 (739)
Q Consensus        72 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~  151 (739)
                      |+..|                                                          +.+++++|++.|++++.
T Consensus        93 A~~~g----------------------------------------------------------~~~~v~~Ll~~~a~~~~  114 (269)
T 4b93_B           93 AALHG----------------------------------------------------------RADLIPLLLKHGANAGA  114 (269)
T ss_dssp             HHHTT----------------------------------------------------------CTTHHHHHHHTTCCTTC
T ss_pred             HHHcC----------------------------------------------------------cHHHHHHHHhcCCCcCc
Confidence            66554                                                          67888999999999999


Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903          152 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYAC  231 (739)
Q Consensus       152 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~  231 (739)
                      .+..|.||+++|+..++.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus       115 ~~~~g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~-g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~  193 (269)
T 4b93_B          115 RNADQAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLS-GNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAV  193 (269)
T ss_dssp             CCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-CCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred             cCCCCCCccccccccChHHHHHHHHHCCCCCCCCCCC-CCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHH
Confidence            9999999999999999999999999999988877644 569999999999999999999999999999999999999999


Q ss_pred             hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC-hHHHHHHHHcCCCC
Q psy903          232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH-VGVAKILLEYGAGI  282 (739)
Q Consensus       232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~-~~ii~~Ll~~~~~~  282 (739)
                      ..|+.++|++|+++|++++.+|.+|.||||+|+++++ .++++++...+...
T Consensus       194 ~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~~  245 (269)
T 4b93_B          194 IEKHVFVVELLLLHGASVQVLNKRQRTAVDCAEQNSKIMELLQVVPSCVASL  245 (269)
T ss_dssp             HTTCHHHHHHHHHTTCCSCCCCTTSCCSGGGSCTTCHHHHHTTC--------
T ss_pred             HcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHhCCcHHHHHHHHHHhchhh
Confidence            9999999999999999999999999999999987775 35555555554443

>1k1a_A B-cell lymphoma 3-encoded protein; BCL-3, NF-kappab transcription factors, ikappab proteins; 1.86A {Homo sapiens} SCOP: d.211.1.1 PDB: 1k1b_A

Probab=100.00  E-value=2.4e-37  Score=291.96  Aligned_cols=221  Identities=26%  Similarity=0.338  Sum_probs=194.1

Q ss_pred             ChhhhhhcCCHHHHHHHHH----cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcc
Q psy903            1 SLVQACSDGDVKTVKKLLT----EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG   76 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~   76 (739)
                      |||.|+..|+.++|++|++    .|++++..|..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+.  
T Consensus        12 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~l~~A~~--   88 (241)
T 1k1a_A           12 PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQ-TAAHLACE--   88 (241)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHH--
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHhcCCCCCcccccCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCC-CHHHHHHH--
Confidence            6899999999999999997    7899999999999999999999999999999999999887776554 66666554  


Q ss_pred             ccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCC----CCCcC
Q psy903           77 FGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGR----SVHET  152 (739)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~----~~~~~  152 (739)
                                                                              .|+.+++++|++.+.    +++..
T Consensus        89 --------------------------------------------------------~~~~~~~~~Ll~~~~~~~~~~~~~  112 (241)
T 1k1a_A           89 --------------------------------------------------------HRSPTCLRALLDSAAPGTLDLEAR  112 (241)
T ss_dssp             --------------------------------------------------------TTCHHHHHHHHHHSCTTSCCTTCC
T ss_pred             --------------------------------------------------------cCCHHHHHHHHHcCCCcccccccc
Confidence                                                                    457889999999887    88888


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHh
Q psy903          153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACA  232 (739)
Q Consensus       153 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~  232 (739)
                      +..|.||||+|+..|+.+++++|++.|++++..+...|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+.
T Consensus       113 ~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~  192 (241)
T 1k1a_A          113 NYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASG  192 (241)
T ss_dssp             CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred             CcCCCcHHHHHHHcCCHHHHHHHHHcCCCcccccccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHH
Confidence            99999999999999999999999999999988876667899999999999999999999999999999999999999999


Q ss_pred             cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903          233 GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA  280 (739)
Q Consensus       233 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~  280 (739)
                      .|+.+++++|+++|++++.+|..|.|||++|+..|+.++++.|.++++
T Consensus       193 ~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~i~~~l~~~~a  240 (241)
T 1k1a_A          193 RGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILRGKATRPA  240 (241)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHTC------
T ss_pred             cCCHHHHHHHHhcCCCCCCcCCCCCCHHHHHHhcCcHHHHhhhccCCC
Confidence            999999999999999999999999999999999999999999988754

>3b7b_A Euchromatic histone-lysine N-methyltransferase 1; ankyrin repeat, alternative splicing, ANK repeat, chromatin regulator, nucleus, phosphorylation; 2.99A {Homo sapiens} SCOP: k.37.1.1 PDB: 3b95_A*

Probab=100.00  E-value=6.7e-37  Score=287.71  Aligned_cols=217  Identities=25%  Similarity=0.308  Sum_probs=200.7

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      ||+.|+..|+.++|++|++.|++++..+..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+.      
T Consensus        14 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~------   86 (237)
T 3b7b_A           14 PLHAAAEAGHVDICHMLVQAGANIDTCSEDQRTPLMEAAENNHLEAVKYLIKAGALVDPKDAEGS-TCLHLAAK------   86 (237)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCCCCCCTTSC-CHHHHHHH------
T ss_pred             HHHHHHHcCcHHHHHHHHHcCCCcCccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCCCCCCCCCC-cHHHHHHH------
Confidence            68999999999999999999999999999999999999999999999999999999987776554 66666554      


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcC-CCCCcCCCCCCcH
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEG-RSVHETTDEGESL  159 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~-~~~~~~~~~g~t~  159 (739)
                                                                          .|+.+++++|++.| .+++..+..|.||
T Consensus        87 ----------------------------------------------------~~~~~~~~~Ll~~~~~~~~~~~~~g~t~  114 (237)
T 3b7b_A           87 ----------------------------------------------------KGHYEVVQYLLSNGQMDVNCQDDGGWTP  114 (237)
T ss_dssp             ----------------------------------------------------TTCHHHHHHHHTTTCCCTTCCCTTSCCH
T ss_pred             ----------------------------------------------------cCCHHHHHHHHhCCCCCcccCCCCCCCH
Confidence                                                                45789999999998 8999999999999


Q ss_pred             HHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHH
Q psy903          160 LSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV  239 (739)
Q Consensus       160 L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v  239 (739)
                      ||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..++.+++
T Consensus       115 L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v  193 (237)
T 3b7b_A          115 MIWATEYKHVDLVKLLLSKGSDINIRDNE-ENICLHWAAFSGCVDIAEILLAAKCDLHAVNIHGDSPLHIAARENRYDCV  193 (237)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHCCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHH
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCccCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHhHH
Confidence            99999999999999999999998877655 56999999999999999999999999999999999999999999999999


Q ss_pred             HHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903          240 RVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE  277 (739)
Q Consensus       240 ~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~  277 (739)
                      ++|+++|++++.+|..|.|||++|+..++.+.+..+++
T Consensus       194 ~~Ll~~gad~~~~d~~g~t~l~~A~~~~~~~~~~~l~~  231 (237)
T 3b7b_A          194 VLFLSRDSDVTLKNKEGETPLQCASLNSQVWSALQMSK  231 (237)
T ss_dssp             HHHHTTTCCTTCCCTTSCCHHHHSCTTCHHHHHHHHHH
T ss_pred             HHHHHcCCCCCccCCCCCCHHHHHHHHHHHHHHHHHHH
Confidence            99999999999999999999999999999876666654

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=2.8e-37  Score=299.29  Aligned_cols=251  Identities=24%  Similarity=0.254  Sum_probs=192.5

Q ss_pred             CcccCCCCCcHHHHHHhcCcHHHHHHHHHcccc---ccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhh
Q psy903           24 VHETTDEGESLLSLACSAGYYELAQVLLAMHAN---VEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSV  100 (739)
Q Consensus        24 ~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~---~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (739)
                      ++.+|..|+||||+|+..|+.++|++|+++|++   ++..+..|. ||||+|+.                          
T Consensus         2 ~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~-t~L~~A~~--------------------------   54 (282)
T 1oy3_D            2 FGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQ-TALHLAAI--------------------------   54 (282)
T ss_dssp             CCCCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSC-CHHHHHHH--------------------------
T ss_pred             CCccCCCCCcHHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCC-CHHHHHHH--------------------------
Confidence            467899999999999999999999999999998   555555443 66655554                          


Q ss_pred             hchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCC
Q psy903          101 SCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA  180 (739)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~  180 (739)
                                                      .|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.++
T Consensus        55 --------------------------------~g~~~~v~~Ll~~ga~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~  102 (282)
T 1oy3_D           55 --------------------------------LGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP  102 (282)
T ss_dssp             --------------------------------HTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCC
T ss_pred             --------------------------------cCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCcchhHhhhccCC
Confidence                                            457999999999999999999999999999999999999999999987


Q ss_pred             CccccC------------CCCCCcHHHHHHHcCcH-HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCC
Q psy903          181 NVEDRG------------IKGECTPLMEAASSGFI-EIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA  247 (739)
Q Consensus       181 ~~~~~~------------~~~~~t~L~~A~~~~~~-~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~  247 (739)
                      +.....            ...+.++++.++..+.. .....+...+.+++.++..|.||||+|+..|+.+++++|+++|+
T Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~  182 (282)
T 1oy3_D          103 SHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGA  182 (282)
T ss_dssp             SSCCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred             CCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcCC
Confidence            643221            12234666666655543 34445556688899999999999999999999999999999999


Q ss_pred             CCCCCCCC-CCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcH
Q psy903          248 NVEDHNEN-GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTA  326 (739)
Q Consensus       248 ~~~~~~~~-~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~  326 (739)
                      +++..+.. |.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..++.+++++|+++|++++.++..|.||
T Consensus       183 ~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~-d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tp  261 (282)
T 1oy3_D          183 DLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTAR-MYGGRTPLGSALLRPNPILARLLRAHGAPEPEDGGDKLSP  261 (282)
T ss_dssp             CTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHTSSCHHHHHHHHHTTCCCCCCC------
T ss_pred             CCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCccc-ccCCCCHHHHHHHcCCcHHHHHHHHcCCCcCcCCCccccc
Confidence            99998854 999999999999999999999999999875 4569999999999999999999999999999999999999


Q ss_pred             HHHHHhCC
Q psy903          327 LMEASMDG  334 (739)
Q Consensus       327 l~~a~~~~  334 (739)
                      +++|....
T Consensus       262 l~~a~~~~  269 (282)
T 1oy3_D          262 CSSSGSDS  269 (282)
T ss_dssp             --------
T ss_pred             ccccCCcc
Confidence            99988654

>1oy3_D Transcription factor inhibitor I-kappa-B-beta; protein-protein complex, transcription factors, nuclear localization, DNA binding protein; 2.05A {Mus musculus} SCOP: d.211.1.1 PDB: 1k3z_D

Probab=100.00  E-value=1.9e-37  Score=300.61  Aligned_cols=254  Identities=18%  Similarity=0.133  Sum_probs=186.0

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCC---CcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRS---VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF   77 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~   77 (739)
                      |||.|+..|+.++|++|++.|++   ++.++..|+||||+|+..|+.++|++|+++|++++..+..+. ||||+|+..| 
T Consensus        12 ~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~-tpL~~A~~~~-   89 (282)
T 1oy3_D           12 ALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGH-TALHLACRVR-   89 (282)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSC-CHHHHHTTTT-
T ss_pred             HHHHHHHcCCHHHHHHHHhcCCCcccccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-CHHHHHHHcC-
Confidence            69999999999999999999988   888999999999999999999999999999999999887776 9999999999 


Q ss_pred             cccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCH-HHHHHHHhcCCCCCcCCCCC
Q psy903           78 GKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDV-KTVKKLLTEGRSVHETTDEG  156 (739)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~-~~~~~ll~~~~~~~~~~~~g  156 (739)
                                 ..++++.+............................++++.++..+.. .....+...+.+++..+..|
T Consensus        90 -----------~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g  158 (282)
T 1oy3_D           90 -----------AHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG  158 (282)
T ss_dssp             -----------CHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred             -----------CcchhHhhhccCCCCchhhHHHHhhcccccCcchhcchhhhccccccchhhhhhhhhhhhcCCCcCCCC
Confidence                       677777776644321110000000011111122334455555544433 33444445678889999999


Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcH
Q psy903          157 ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE  236 (739)
Q Consensus       157 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~  236 (739)
                      .||||+|+..|+.+++++|+++|++++..+...|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus       159 ~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~  238 (282)
T 1oy3_D          159 HTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP  238 (282)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCH
T ss_pred             cCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCcCHHHHHHHcCCHHHHHHHHHcCCCCcccccCCCCHHHHHHHcCCc
Confidence            99999999999999999999999999988877678999999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          237 AVVRVLLECGANVEDHNENGHTPLMEAASAG  267 (739)
Q Consensus       237 ~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~  267 (739)
                      +++++|+++|++++.++..|.|||++|....
T Consensus       239 ~~v~~Ll~~ga~~~~~~~~g~tpl~~a~~~~  269 (282)
T 1oy3_D          239 ILARLLRAHGAPEPEDGGDKLSPCSSSGSDS  269 (282)
T ss_dssp             HHHHHHHHTTCCCCCCC--------------
T ss_pred             HHHHHHHHcCCCcCcCCCcccccccccCCcc
Confidence            9999999999999999999999999997654

>4b93_B Ankyrin repeat domain-containing protein 27; endocytosis, exocytosis, snare; 2.00A {Homo sapiens}

Probab=100.00  E-value=1.4e-37  Score=294.52  Aligned_cols=237  Identities=29%  Similarity=0.401  Sum_probs=176.2

Q ss_pred             ccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHH
Q psy903           26 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALD  105 (739)
Q Consensus        26 ~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (739)
                      .+|..+.|||+.||..|+.++|++|++.|++........                                         
T Consensus         6 kkd~~~~~~L~~A~~~G~~~~v~~LL~~~~~~~~~~~~~-----------------------------------------   44 (269)
T 4b93_B            6 KKDYREVEKLLRAVADGDLEMVRYLLEWTEEDLEDAEDT-----------------------------------------   44 (269)
T ss_dssp             -CCCHHHHHHHHHHHTTCHHHHHHHHTCC---------------------------------------------------
T ss_pred             ccCccchhHHHHHHHcCCHHHHHHHHHCCCccccccccc-----------------------------------------
Confidence            467788999999999999999999999998642211000                                         


Q ss_pred             HHHHHHHhhhcCCCCCCCchHHHHHHHcCCH-HHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccc
Q psy903          106 EAAAALTRMRNENPRPQNERSLVQACSDGDV-KTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED  184 (739)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~-~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~  184 (739)
                                .......+.++|+.|+..++. .++++|++.|+++|..|.+|.||||+|+..|+.++|++|++.|++++.
T Consensus        45 ----------~~~~~~~~~t~L~~a~~~~~~~~~v~~Ll~~Gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~~a~~~~  114 (269)
T 4b93_B           45 ----------VSAADPEFCHPLCQCPKCAPAQKRLAKVPASGLGVNVTSQDGSSPLHVAALHGRADLIPLLLKHGANAGA  114 (269)
T ss_dssp             ----------------------------------------CCCCTTCCCTTSCCHHHHHHHTTCTTHHHHHHHTTCCTTC
T ss_pred             ----------ccccCccCCCHHHHHHHhCCHHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhcCCCcCc
Confidence                      001112234555555554444 478899999999999999999999999999999999999999999887


Q ss_pred             cCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903          185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAA  264 (739)
Q Consensus       185 ~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~  264 (739)
                      .+.. |.||++.|+..++.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+
T Consensus       115 ~~~~-g~t~l~~a~~~~~~~~~~~Ll~~g~~~n~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gadvn~~~~~g~t~Lh~A~  193 (269)
T 4b93_B          115 RNAD-QAVPLHLACQQGHFQVVKCLLDSNAKPNKKDLSGNTPLIYACSGGHHELVALLLQHGASINASNNKGNTALHEAV  193 (269)
T ss_dssp             CCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCGGGHHHHHHTTCCTTCBCTTSCBHHHHHH
T ss_pred             cCCC-CCCccccccccChHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCCCccccCCCcHHHHHH
Confidence            7655 469999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             hcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCC-HHHHHHHHHcCCC
Q psy903          265 SAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGH-LDMVRFLLSAGAD  315 (739)
Q Consensus       265 ~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~-~~~v~~Ll~~~~~  315 (739)
                      ..|+.+++++|+++|++++.. +..|+|||++|+++++ .++++++.+.+..
T Consensus       194 ~~g~~~~v~~Ll~~Gad~~~~-d~~G~TpL~~A~~~~~i~~lL~~l~~~~~~  244 (269)
T 4b93_B          194 IEKHVFVVELLLLHGASVQVL-NKRQRTAVDCAEQNSKIMELLQVVPSCVAS  244 (269)
T ss_dssp             HTTCHHHHHHHHHTTCCSCCC-CTTSCCSGGGSCTTCHHHHHTTC-------
T ss_pred             HcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHhCCcHHHHHHHHHHhchh
Confidence            999999999999999999875 4569999999988775 3455555554443

>3aji_A 26S proteasome non-ATPase regulatory subunit 10; gankyrin, S6 ATPase, P-benzoyl-L-phenylalanine, PBPA, amber suppression; HET: PBF; 2.05A {Mus musculus} PDB: 2dvw_A 2dwz_A* 1tr4_A 1uoh_A 1qym_A

Probab=100.00  E-value=4.4e-36  Score=280.88  Aligned_cols=226  Identities=27%  Similarity=0.295  Sum_probs=196.0

Q ss_pred             CCCCcHHHHHHhcCcHHHHHHHHHccccc-cccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHH
Q psy903           29 DEGESLLSLACSAGYYELAQVLLAMHANV-EDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEA  107 (739)
Q Consensus        29 ~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~-~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (739)
                      ..+.||||.|+..|+.++++.|++.+... +..+..+ .||||+|+                                  
T Consensus         4 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g-~t~L~~A~----------------------------------   48 (231)
T 3aji_A            4 CVSNIMICNLAYSGKLDELKERILADKSLATRTDQDS-RTALHWAC----------------------------------   48 (231)
T ss_dssp             CCSSSHHHHHHHHTCHHHHHHHHHHCGGGGGCCCTTS-CCHHHHHH----------------------------------
T ss_pred             ccccchHHHHHHhCCHHHHHHHHHhchhhhhcCCCCC-CCHHHHHH----------------------------------
Confidence            45789999999999999999999987653 3333333 25555544                                  


Q ss_pred             HHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCC
Q psy903          108 AAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI  187 (739)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~  187 (739)
                                              ..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+.
T Consensus        49 ------------------------~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~  104 (231)
T 3aji_A           49 ------------------------SAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAGXDEIVKALLVKGAHVNAVNQ  104 (231)
T ss_dssp             ------------------------HHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCT
T ss_pred             ------------------------HcCcHHHHHHHHHhCCCCCCcCCCCCCHHHHHHHcCHHHHHHHHHHcCCCCCCCCC
Confidence                                    55588999999999999999999999999999999999999999999999887665


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          188 KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG  267 (739)
Q Consensus       188 ~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~  267 (739)
                      . |.||||+|+..++.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus       105 ~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~  183 (231)
T 3aji_A          105 N-GCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYDATAMHRAAAKGNLKMVHILLFYKASTNIQDTEGNTPLHLACDEE  183 (231)
T ss_dssp             T-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTT
T ss_pred             C-CCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCccccCCCCCCHHHHHHHCC
Confidence            4 469999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             ChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy903          268 HVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD  315 (739)
Q Consensus       268 ~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~  315 (739)
                      +.+++++|+++|++++.. +..|.||+++|+..++.+++++|.++|++
T Consensus       184 ~~~~v~~Ll~~ga~~~~~-~~~g~t~l~~A~~~~~~~i~~lL~~~~a~  230 (231)
T 3aji_A          184 RVEEAKFLVTQGASIYIE-NKEEKTPLQVAKGGLGLILKRLAEGEEAS  230 (231)
T ss_dssp             CHHHHHHHHHTTCCSCCC-CTTSCCHHHHSCHHHHHHHHHHHHHHHHC
T ss_pred             CHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHhhHHHHHHHHHcccccc
Confidence            999999999999988764 55688999999998899999999887654

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=1.9e-36  Score=281.59  Aligned_cols=215  Identities=23%  Similarity=0.275  Sum_probs=192.2

Q ss_pred             CCHHHHHHHHHcCCCCccc-CCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCC
Q psy903            9 GDVKTVKKLLTEGRSVHET-TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKL   87 (739)
Q Consensus         9 g~~~~v~~ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~   87 (739)
                      |+.++|++|++.|++++.. |..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+.             
T Consensus         2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~-------------   67 (223)
T 2f8y_A            2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNMGR-TPLHAAVS-------------   67 (223)
T ss_dssp             ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHH-------------
T ss_pred             CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC-CHHHHHHH-------------
Confidence            6788999999999999776 88999999999999999999999999999988776654 66666655             


Q ss_pred             CCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCC-CCCcCCCCCCcHHHHHHHc
Q psy903           88 ADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGR-SVHETTDEGESLLSLACSA  166 (739)
Q Consensus        88 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~-~~~~~~~~g~t~L~~A~~~  166 (739)
                                                                   .|+.+++++|++.+. +++..+..|.||||+|+..
T Consensus        68 ---------------------------------------------~~~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~  102 (223)
T 2f8y_A           68 ---------------------------------------------ADAQGVFQILIRNRATDLDARMHDGTTPLILAARL  102 (223)
T ss_dssp             ---------------------------------------------TTCHHHHHHHHHBTTSCTTCCCTTCCCHHHHHHHH
T ss_pred             ---------------------------------------------cCCHHHHHHHHHcCCCCcccCCCCCCcHHHHHHHh
Confidence                                                         457899999999887 8888999999999999999


Q ss_pred             CcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCC
Q psy903          167 GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG  246 (739)
Q Consensus       167 ~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~  246 (739)
                      |+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|
T Consensus       103 ~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  181 (223)
T 2f8y_A          103 AVEGMLEDLINSHADVNAVDDL-GKSALHWAAAVNNVDAAVVLLKNGANKDMQNNREETPLFLAAREGSYETAKVLLDHF  181 (223)
T ss_dssp             TCHHHHHHHHHTTCCTTCBCTT-SCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTT
T ss_pred             CcHHHHHHHHHcCCCCcCcCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCcCHHHHHHHcCCHHHHHHHHHcC
Confidence            9999999999999998877654 569999999999999999999999999999999999999999999999999999999


Q ss_pred             CCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCc
Q psy903          247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGIN  283 (739)
Q Consensus       247 ~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~  283 (739)
                      ++++.++..|.|||++|+..++.+++++|+++|....
T Consensus       182 a~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~  218 (223)
T 2f8y_A          182 ANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS  218 (223)
T ss_dssp             CCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred             CCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence            9999999999999999999999999999999987643

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=7.7e-36  Score=281.73  Aligned_cols=222  Identities=28%  Similarity=0.334  Sum_probs=139.4

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      ||+.|+..|+.++|++|++.|++++.++..|.||||+|+..|+.+++++|+++|++++......+.||||+|+       
T Consensus        12 ~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~-------   84 (240)
T 3eu9_A           12 DIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT-------   84 (240)
T ss_dssp             CHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH-------
T ss_pred             HHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH-------
Confidence            4666666666666666666666666666666666666666666666666666666655444332324443333       


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL  160 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L  160 (739)
                                                                         ..|+.+++++|++.|++++..+..|.|||
T Consensus        85 ---------------------------------------------------~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l  113 (240)
T 3eu9_A           85 ---------------------------------------------------RQGHLSMVVQLMKYGADPSLIDGEGCSCI  113 (240)
T ss_dssp             ---------------------------------------------------HHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred             ---------------------------------------------------HcCCHHHHHHHHHcCCCCcccCCCCCCHH
Confidence                                                               33456666666666666666666666666


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc-HHHHHHHHHCCCCCCCCCC-CCCcHHHHHHhcCcHHH
Q psy903          161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF-IEIVRLLINHGADVNGQSS-SGNTPLMYACAGGHEAV  238 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~-~~~~~~Ll~~g~~~~~~~~-~~~t~L~~A~~~~~~~~  238 (739)
                      |+|+..|+.+++++|++.|++++..+.. |.||||+|+..++ .+++++|++.|++++..+. .|.||||+|+..|+.++
T Consensus       114 ~~A~~~~~~~~~~~Ll~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~~L~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~  192 (240)
T 3eu9_A          114 HLAAQFGHTSIVAYLIAKGQDVDMMDQN-GMTPLMWAAYRTHSVDPTRLLLTFNVSVNLGDKYHKNTALHWAVLAGNTTV  192 (240)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHCCSSTTHHHHHHTTCCTTCCCTTTCCCHHHHHHHHTCHHH
T ss_pred             HHHHHcCHHHHHHHHHhcCCCccccCCC-CCcHHHHHHHhCChHHHHHHHHhcCCCcchhhccCCCcHHHHHHHcCCHHH
Confidence            6666666666666666666666554433 3466666664444 5666666666666666665 66666666666666666


Q ss_pred             HHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903          239 VRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG  281 (739)
Q Consensus       239 v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~  281 (739)
                      +++|+++|++++..+..|.|||++|+..|+.+++++|++.+..
T Consensus       193 v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~  235 (240)
T 3eu9_A          193 ISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQA  235 (240)
T ss_dssp             HHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC--
T ss_pred             HHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhc
Confidence            6666666666666666666666666666666666666666544

>3eu9_A Huntingtin-interacting protein 14; epigenetics, ankyrin repeats, methyllyine binding, huntingti interacting protein 14, acyltransferase, ANK repeat; HET: HIS; 1.99A {Homo sapiens}

Probab=100.00  E-value=2.9e-35  Score=277.80  Aligned_cols=231  Identities=26%  Similarity=0.330  Sum_probs=217.9

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHH
Q psy903          119 PRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA  198 (739)
Q Consensus       119 ~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~  198 (739)
                      .+..+.++|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++......+.||||+|+
T Consensus         5 ~d~~~~~~l~~A~~~g~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~   84 (240)
T 3eu9_A            5 IDDYSTWDIVKATQYGIYERCRELVEAGYDVRQPDKENVTLLHWAAINNRIDLVKYYISKGAIVDQLGGDLNSTPLHWAT   84 (240)
T ss_dssp             CSCGGGCCHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBTTTTBCHHHHHH
T ss_pred             cccccchHHHHHHHcCChHHHHHHHHcCCCcCCCCCCCCCHHHHHHHhCCHHHHHHHHHcCCcchhhcCCcCCChhHHHH
Confidence            34567889999999999999999999999999999999999999999999999999999999998888777889999999


Q ss_pred             HcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC-hHHHHHHHH
Q psy903          199 SSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH-VGVAKILLE  277 (739)
Q Consensus       199 ~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~-~~ii~~Ll~  277 (739)
                      ..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..++ .+++++|++
T Consensus        85 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~~L~~  164 (240)
T 3eu9_A           85 RQGHLSMVVQLMKYGADPSLIDGEGCSCIHLAAQFGHTSIVAYLIAKGQDVDMMDQNGMTPLMWAAYRTHSVDPTRLLLT  164 (240)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHCCSSTTHHHHHH
T ss_pred             HcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCHHHHHHHHHhcCCCccccCCCCCcHHHHHHHhCChHHHHHHHHh
Confidence            9999999999999999999999999999999999999999999999999999999999999999997665 899999999


Q ss_pred             cCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCc
Q psy903          278 YGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQS  349 (739)
Q Consensus       278 ~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~  349 (739)
                      .|.+++......+.||||+|+..++.+++++|+++|++++..+..|.||+++|+..++.+++++|++.+...
T Consensus       165 ~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~~~~~~  236 (240)
T 3eu9_A          165 FNVSVNLGDKYHKNTALHWAVLAGNTTVISLLLEAGANVDAQNIKGESALDLAKQRKNVWMINHLQEARQAK  236 (240)
T ss_dssp             TTCCTTCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHHC---
T ss_pred             cCCCcchhhccCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHhhhcc
Confidence            999999877667999999999999999999999999999999999999999999999999999999987653

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=1.2e-35  Score=277.39  Aligned_cols=214  Identities=29%  Similarity=0.388  Sum_probs=138.8

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcc-cCCCCCcHHHHHHhcCcHHHHHHHHHcccc--ccc-cCCCCCcchhHHHhhcc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHE-TTDEGESLLSLACSAGYYELAQVLLAMHAN--VED-RGIKGECTPLMEAASSG   76 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~--~~~-~~~~~~~t~l~~a~~~~   76 (739)
                      ||+.|+..|+.++|++|++.|.+... .|..|+||||+|+..|+.+++++|+++|++  ++. .+..+            
T Consensus         5 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g------------   72 (228)
T 2dzn_A            5 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSG------------   72 (228)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTS------------
T ss_pred             HHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCC------------
Confidence            46677777777777777776655543 666677777777777777777777777633  322 22222            


Q ss_pred             ccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcC--CCCCcCCC
Q psy903           77 FGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEG--RSVHETTD  154 (739)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~--~~~~~~~~  154 (739)
                                                                     .|+|+.|+..|+.+++++|++.|  ++++..+.
T Consensus        73 -----------------------------------------------~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~  105 (228)
T 2dzn_A           73 -----------------------------------------------WTPFHIACSVGNLEVVKSLYDRPLKPDLNKITN  105 (228)
T ss_dssp             -----------------------------------------------CCHHHHHHHHCCHHHHHHHHSSSSCCCTTCCCT
T ss_pred             -----------------------------------------------CCHHHHHHHcCCHHHHHHHHhCCCCcccccCCc
Confidence                                                           23333333444666777777766  66666666


Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhc
Q psy903          155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG-ADVNGQSSSGNTPLMYACAG  233 (739)
Q Consensus       155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~L~~A~~~  233 (739)
                      .|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+.+++++|+++| ++++.+|..|.||||+|+..
T Consensus       106 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~d~~g~t~L~~A~~~  184 (228)
T 2dzn_A          106 QGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKF-NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE  184 (228)
T ss_dssp             TCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHTTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHT
T ss_pred             CCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCC-CCCHHHHHHHcCCHHHHHHHHhcCcccccCcCCCCCCHHHHHHHc
Confidence            7777777777777777777777777766655543 347777777777777777777776 66777777777777777777


Q ss_pred             CcHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903          234 GHEAVVRVLL-ECGANVEDHNENGHTPLMEAASAGHVGVAKILLE  277 (739)
Q Consensus       234 ~~~~~v~~Ll-~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~  277 (739)
                      |+.+++++|+ ++|++++.+|..|.||+++|+..   ++.++|++
T Consensus       185 ~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~  226 (228)
T 2dzn_A          185 GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN  226 (228)
T ss_dssp             TCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred             CCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence            7777777777 66777777777777777776443   45555543

>3kea_A K1L; tropism, ANK repeat, viral protein; 2.30A {Vaccinia virus}

Probab=100.00  E-value=3.9e-36  Score=288.95  Aligned_cols=214  Identities=20%  Similarity=0.206  Sum_probs=195.1

Q ss_pred             HHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHH
Q psy903          131 CSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLI  210 (739)
Q Consensus       131 ~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll  210 (739)
                      +...+.+.+..++..+ +++..|..|.||||+|+..|+.+++++|++.|++++..+   |+||||+|+..|+.+++++|+
T Consensus         7 i~~~~~~~v~~lL~~~-~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~---g~t~L~~A~~~g~~~~v~~Ll   82 (285)
T 3kea_A            7 INTWKSKQLKSFLSSK-DTFKADVHGHSASYYAIADNNVRLVCTLLNAGALKNLLE---NEFPLHQAATLEDTKIVKILL   82 (285)
T ss_dssp             GGGCCHHHHHHHHHST-TTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTGGGSCCT---TCCHHHHHTTSSSCHHHHHHH
T ss_pred             HHhcCHHHHHHHHHhC-CCCccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCC---CCCHHHHHHHcCCHHHHHHHH
Confidence            3445556666666554 688999999999999999999999999999999988773   679999999999999999999


Q ss_pred             HCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCC-CcHHHHHHhcCChHHHHHHHHcCCCCcccCcCc
Q psy903          211 NHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENG-HTPLMEAASAGHVGVAKILLEYGAGINTHSNEF  289 (739)
Q Consensus       211 ~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~-~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~  289 (739)
                      ++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..| .||||+|+..|+.+++++|+++|++....  ..
T Consensus        83 ~~ga~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~--~~  160 (285)
T 3kea_A           83 FSGLDDSQFDDKGNTALYYAVDSGNMQTVKLFVKKNWRLMFYGKTGWKTSFYHAVMLNDVSIVSYFLSEIPSTFDL--AI  160 (285)
T ss_dssp             HTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHCGGGGGCSSSGGGSHHHHHHHTTCHHHHHHHHTTSCTTCCC--ST
T ss_pred             HCCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHhcCCCCCccCCCCCCCHHHHHHHcCCHHHHHHHHhCCCccccc--cC
Confidence            9999999999999999999999999999999999999999999999 89999999999999999999999876332  26


Q ss_pred             cCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcH-HHHHHhCCchHHHHHHHHcCCCch
Q psy903          290 KESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTA-LMEASMDGHVEVAKLLLDSGAQSV  350 (739)
Q Consensus       290 ~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~-l~~a~~~~~~~~~~~L~~~~~~~~  350 (739)
                      |.||||+|+..|+.+++++|+++|++++..+..|.|| |++|+..++.+++++|+++|+++.
T Consensus       161 g~t~L~~A~~~g~~~~v~~Ll~~gad~n~~~~~g~t~~L~~A~~~~~~~~v~~Ll~~gad~~  222 (285)
T 3kea_A          161 LLSCIHITIKNGHVDMMILLLDYMTSTNTNNSLLFIPDIKLAIDNKDIEMLQALFKYDINIY  222 (285)
T ss_dssp             HHHHHHHHHHTTCHHHHHHHHHHHHHTCTTCCCBCCTTHHHHHHHTCHHHHHHHTTSCBCST
T ss_pred             CccHHHHHHHcChHHHHHHHHHcCCCCCcccCCCCChHHHHHHHcCCHHHHHHHHHcCCCCC
Confidence            8899999999999999999999999999999999997 999999999999999999888754

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=4e-35  Score=286.42  Aligned_cols=242  Identities=25%  Similarity=0.342  Sum_probs=177.0

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      ||+.|+..|++++|++|++.|++++..|..|+||||+|+..|+.++|++|+++|++++..+..+. ||||+|+..     
T Consensus        43 ~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~g~-tpL~~A~~~-----  116 (299)
T 1s70_B           43 VFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGW-IPLHAAASC-----  116 (299)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHH-----
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCC-cHHHHHHHc-----
Confidence            47889999999999999999999999999999999999999999999999999999887776654 666666654     


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL  160 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L  160 (739)
                                                                           |+.+++++|++.|++++..+..|.|||
T Consensus       117 -----------------------------------------------------g~~~~v~~Ll~~g~~~~~~~~~g~t~l  143 (299)
T 1s70_B          117 -----------------------------------------------------GYLDIAEYLISQGAHVGAVNSEGDTPL  143 (299)
T ss_dssp             -----------------------------------------------------TCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred             -----------------------------------------------------CCHHHHHHHHhCCCCCCCcCCCCCCHH
Confidence                                                                 478899999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHhC-CCCccccCCCCCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCcHHH
Q psy903          161 SLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLMEAASSGFIEIVRLLIN-HGADVNGQSSSGNTPLMYACAGGHEAV  238 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~L~~A~~~~~~~~  238 (739)
                      |+|+..++.+++++++.. +.+++...... .+++        ...++.++. ........+..|.||||+|+..|+.++
T Consensus       144 ~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~-~~~~--------~~~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~  214 (299)
T 1s70_B          144 DIAEEEAMEELLQNEVNRQGVDIEAARKEE-ERIM--------LRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEV  214 (299)
T ss_dssp             HHCCSHHHHHHHHHHHHHHTCCHHHHHHHH-HHHH--------HHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHH
T ss_pred             HHHHhcchHHHHHHHHhhcCCCchhhhhhh-hhHH--------HHHHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHH
Confidence            999999999999887764 33332211100 0111        122233333 333344456677777777777777777


Q ss_pred             HHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHc
Q psy903          239 VRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA  312 (739)
Q Consensus       239 v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~  312 (739)
                      +++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+.. ..+.++.+++.
T Consensus       215 v~~Ll~~g~d~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~gad~~~~-d~~g~t~l~~A~~~-~~~~l~~l~~~  286 (299)
T 1s70_B          215 LKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAV-NKVGQTAFDVADED-ILGYLEELQKK  286 (299)
T ss_dssp             HHHHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCTTTSCCSG-GGHHHHHHHHH
T ss_pred             HHHHHHcCCCCCCcCCCCCcHHHHHHhcCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHH-HHHHHHHHHHH
Confidence            77777777777777777777777777777777777777777777654 44577777777553 34455555443

>2dzn_A Probable 26S proteasome regulatory subunit P28; ankyrin repeats, A-helical domain, structural genomics, NPPSFA; 2.20A {Saccharomyces cerevisiae} SCOP: d.211.1.1 PDB: 2dzo_A 1ixv_A 1wg0_A

Probab=100.00  E-value=2.6e-34  Score=268.40  Aligned_cols=218  Identities=27%  Similarity=0.314  Sum_probs=199.5

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCCCCc-CCCCCCcHHHHHHHcCcHHHHHHHHhCC--CCccccCCCCCCcHHHHHHH
Q psy903          123 NERSLVQACSDGDVKTVKKLLTEGRSVHE-TTDEGESLLSLACSAGYYELAQVLLAMH--ANVEDRGIKGECTPLMEAAS  199 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~--~~~~~~~~~~~~t~L~~A~~  199 (739)
                      +.|||+.|+..|+.+++++|++.+.+... .+..|.||||+|+..|+.+++++|++.|  .+++...+..|.||||+|+.
T Consensus         2 g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~g~t~L~~A~~   81 (228)
T 2dzn_A            2 SNYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACS   81 (228)
T ss_dssp             -CCHHHHHHHTTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTCTTCCGGGCCCTTSCCHHHHHHH
T ss_pred             CccHHHHHHHhCCHHHHHHHHhcCccccccCCCCCCCHHHHHHHcCCHHHHHHHHhccccccccccCCCCCCCHHHHHHH
Confidence            57899999999999999999999987654 8899999999999999999999999999  55555345667899999999


Q ss_pred             cCcHHHHHHHHHCC--CCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903          200 SGFIEIVRLLINHG--ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE  277 (739)
Q Consensus       200 ~~~~~~~~~Ll~~g--~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~  277 (739)
                      .|+.+++++|+++|  ++++..+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|++
T Consensus        82 ~~~~~~~~~Ll~~g~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~  161 (228)
T 2dzn_A           82 VGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCG  161 (228)
T ss_dssp             HCCHHHHHHHHSSSSCCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             cCCHHHHHHHHhCCCCcccccCCcCCCCHHHHHHHcCCHhHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            99999999999998  8999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             cC-CCCcccCcCccCCHHHHHHHcCCHHHHHHHH-HcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHH
Q psy903          278 YG-AGINTHSNEFKESALTLACYKGHLDMVRFLL-SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD  344 (739)
Q Consensus       278 ~~-~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll-~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~  344 (739)
                      +| .+++. .+..|.||||+|+..++.+++++|+ +.|++++..+..|.||+++|...   ++.++|++
T Consensus       162 ~g~~~~~~-~d~~g~t~L~~A~~~~~~~~v~~Ll~~~ga~~~~~~~~g~t~l~~A~~~---~~~~~l~~  226 (228)
T 2dzn_A          162 LGKSAVNW-QDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALNE---QVKKFFLN  226 (228)
T ss_dssp             TTCCCSCC-CCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCBCTTSCBGGGGCSST---THHHHHHT
T ss_pred             cCcccccC-cCCCCCCHHHHHHHcCCHHHHHHHHHhcCCCCCccCCCCCcHHHHHHHH---HHHHHHHh
Confidence            99 77665 4566999999999999999999999 89999999999999999999754   56666665

>2f8y_A Notch homolog 1, translocation-associated (drosophila); ankyrin repeats, transcription; 1.55A {Homo sapiens} PDB: 2qc9_A 1ymp_A

Probab=100.00  E-value=2.5e-34  Score=267.34  Aligned_cols=215  Identities=25%  Similarity=0.313  Sum_probs=197.9

Q ss_pred             CCHHHHHHHHhcCCCCCcC-CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHC
Q psy903          134 GDVKTVKKLLTEGRSVHET-TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH  212 (739)
Q Consensus       134 ~~~~~~~~ll~~~~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~  212 (739)
                      |+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++
T Consensus         2 g~~~~i~~Ll~~g~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~   80 (223)
T 2f8y_A            2 DAPAVISDFIYQGASLHNQTDRTGETALHLAARYSRSDAAKRLLEASADANIQDNM-GRTPLHAAVSADAQGVFQILIRN   80 (223)
T ss_dssp             ---CCEETTEETTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHB
T ss_pred             CcHHHHHHHHHcCCCcccccCCCCCchHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHc
Confidence            6788899999999998876 789999999999999999999999999998877654 56999999999999999999999


Q ss_pred             CC-CCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccC
Q psy903          213 GA-DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKE  291 (739)
Q Consensus       213 g~-~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~  291 (739)
                      +. +++..+..|.||||+|+..++.+++++|+++|++++..+..|.||||+|+..|+.+++++|+++|++++.. +..|.
T Consensus        81 ~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~  159 (223)
T 2f8y_A           81 RATDLDARMHDGTTPLILAARLAVEGMLEDLINSHADVNAVDDLGKSALHWAAAVNNVDAAVVLLKNGANKDMQ-NNREE  159 (223)
T ss_dssp             TTSCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTCC
T ss_pred             CCCCcccCCCCCCcHHHHHHHhCcHHHHHHHHHcCCCCcCcCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCc-CCCCc
Confidence            87 88999999999999999999999999999999999999999999999999999999999999999998875 45699


Q ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCch
Q psy903          292 SALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSV  350 (739)
Q Consensus       292 ~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~  350 (739)
                      |||++|+..++.+++++|+++|++++..+..|.||+++|+..++.+++++|+++|....
T Consensus       160 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L~~~g~~~~  218 (223)
T 2f8y_A          160 TPLFLAAREGSYETAKVLLDHFANRDITDHMDRLPRDIAQERMHHDIVRLLDEYNLVRS  218 (223)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCSSC
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCccccccCCCHHHHHHHhcchHHHHHHHHcCCCcc
Confidence            99999999999999999999999999999999999999999999999999999988643

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=1.1e-36  Score=298.94  Aligned_cols=272  Identities=14%  Similarity=0.044  Sum_probs=207.0

Q ss_pred             hhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCC
Q psy903            6 CSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDG   85 (739)
Q Consensus         6 ~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~   85 (739)
                      +.....++|++|+++|++++..+..|.|+++     |+.++|++|+++|++++.       ++++.|+.....       
T Consensus        27 ~~~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~-------~~~~~a~~~~~~-------   87 (327)
T 1sw6_A           27 IITFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEI-------QEMPTSLNNDSS-------   87 (327)
T ss_dssp             EEECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-----------------------------
T ss_pred             hhhhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCcc-------ccchHhhhcccc-------
Confidence            3445567899999999999999999999987     999999999999998643       677777653100       


Q ss_pred             CCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCc-CCCCCCcHHHHHH
Q psy903           86 KLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHE-TTDEGESLLSLAC  164 (739)
Q Consensus        86 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~-~~~~g~t~L~~A~  164 (739)
                                                  ...........+..+.|+..+..++++.|++.|++++. .+..|.||||+|+
T Consensus        88 ----------------------------~~~~~~~~~~~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa  139 (327)
T 1sw6_A           88 ----------------------------NRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLT  139 (327)
T ss_dssp             --------------------------------------------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHH
T ss_pred             ----------------------------cccccccCCccchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHH
Confidence                                        00011122233456778888888999999999999999 8999999999999


Q ss_pred             HcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc---HHHHHHHHHCC-CCCCCCCCCCCcHHHHHHh----cCcH
Q psy903          165 SAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF---IEIVRLLINHG-ADVNGQSSSGNTPLMYACA----GGHE  236 (739)
Q Consensus       165 ~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~---~~~~~~Ll~~g-~~~~~~~~~~~t~L~~A~~----~~~~  236 (739)
                      ..|+.++|++|+++|++++..+.. |+||||+|+..|+   .++++.|++.+ ++++.+|..|.||||+|+.    .|+.
T Consensus       140 ~~g~~~~v~~Ll~~Gad~n~~d~~-g~TpLh~A~~~g~~~~~~~~~~ll~~~~~~~~~~d~~g~tpLh~A~~~~~~~g~~  218 (327)
T 1sw6_A          140 SIANLELVKHLVKHGSNRLYGDNM-GESCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCS  218 (327)
T ss_dssp             HTTCHHHHHHHHHTTCCTTBCCTT-CCCHHHHHHHSSHHHHTTCHHHHHHHHGGGGGEECTTCCCHHHHHHHHHTSTTCH
T ss_pred             HcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHhcccccHHHHHHHHHhhhccccCCCCCCCCHHHHHHHHccccccH
Confidence            999999999999999999877654 5799999999998   68888888876 7799999999999999999    8999


Q ss_pred             HHHHHHHHC--------------------CCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHH
Q psy903          237 AVVRVLLEC--------------------GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTL  296 (739)
Q Consensus       237 ~~v~~Ll~~--------------------~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~  296 (739)
                      +++++|++.                    |++++..+..|.||||.|+.      +++|++++  ++. .+..|.||||+
T Consensus       219 ~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~~g~t~L~~a~~------~~~Ll~~~--~n~-~d~~G~TpLh~  289 (327)
T 1sw6_A          219 AAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD------LKWIIANM--LNA-QDSNGDTCLNI  289 (327)
T ss_dssp             HHHHHHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCS------HHHHHHHT--TTC-CCTTSCCHHHH
T ss_pred             HHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccccCCChhHHHHH------HHHHHHhC--CCC-CCCCCCCHHHH
Confidence            999999987                    89999999999999999985      89999984  444 35569999999


Q ss_pred             HHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCC
Q psy903          297 ACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDG  334 (739)
Q Consensus       297 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~  334 (739)
                      |+..|+.+++++|+++|++++.++..|.|||++|+..|
T Consensus       290 A~~~g~~~~v~~Ll~~Gad~~~~d~~G~TpL~~A~~~g  327 (327)
T 1sw6_A          290 AARLGNISIVDALLDYGADPFIANKSGLRPVDFGAGLE  327 (327)
T ss_dssp             HHHHCCHHHHHHHHHTTCCTTCCCTTSCCGGGGTCC--
T ss_pred             HHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHhcC
Confidence            99999999999999999999999999999999998654

>1s70_B 130 kDa myosin-binding subunit of smooth muscle myosin phophatase (M130), serine/threonine protein phosphatase PP1-beta (OR delta) catalytic subunit; myosin phosphatase; HET: PGE; 2.70A {Gallus gallus} SCOP: d.211.1.1

Probab=100.00  E-value=1.6e-34  Score=282.26  Aligned_cols=274  Identities=22%  Similarity=0.251  Sum_probs=225.1

Q ss_pred             hhhhhcCCHHHHHHHHHcCCCCcc---------cCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHh
Q psy903            3 VQACSDGDVKTVKKLLTEGRSVHE---------TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA   73 (739)
Q Consensus         3 ~~A~~~g~~~~v~~ll~~g~~~~~---------~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~   73 (739)
                      +.++..|..+.++.++..+.++..         .+..|.||||.||..|+.++|++|+++|++++..+..|. ||||+|+
T Consensus         3 ~~~a~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~   81 (299)
T 1s70_B            3 MADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGL-TALHQAC   81 (299)
T ss_dssp             SHHHHHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCC-BHHHHHH
T ss_pred             hhHHHHHHHHHHHHHHccccccccccccCcccccccCCccHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCC-CHHHHHH
Confidence            457888899999999987655432         245678999999999999999999999999988876664 7766666


Q ss_pred             hccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCC
Q psy903           74 SSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETT  153 (739)
Q Consensus        74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~  153 (739)
                      ..                                                          |+.+++++|++.|++++..+
T Consensus        82 ~~----------------------------------------------------------g~~~~v~~Ll~~ga~~~~~~  103 (299)
T 1s70_B           82 ID----------------------------------------------------------DNVDMVKFLVENGANINQPD  103 (299)
T ss_dssp             HT----------------------------------------------------------TCHHHHHHHHHTTCCTTCCC
T ss_pred             Hc----------------------------------------------------------CCHHHHHHHHHCCCCCCCCC
Confidence            54                                                          57899999999999999999


Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHh
Q psy903          154 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLIN-HGADVNGQSSSGNTPLMYACA  232 (739)
Q Consensus       154 ~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~L~~A~~  232 (739)
                      ..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..++.+++++++. .|.+++..+..+.++++.   
T Consensus       104 ~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~~~~~~~~~---  179 (299)
T 1s70_B          104 NEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSE-GDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLR---  179 (299)
T ss_dssp             TTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHCCSHHHHHHHHHHHHHHTCCHHHHHHHHHHHHHH---
T ss_pred             CCCCcHHHHHHHcCCHHHHHHHHhCCCCCCCcCCC-CCCHHHHHHhcchHHHHHHHHhhcCCCchhhhhhhhhHHHH---
Confidence            99999999999999999999999999998877654 5699999999999999998886 466554333322333322   


Q ss_pred             cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHc
Q psy903          233 GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA  312 (739)
Q Consensus       233 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~  312 (739)
                          .+..++..........+..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..|+.+++++|+++
T Consensus       180 ----~~~~~l~~~~~~~~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~d~~~~-d~~g~tpL~~A~~~~~~~~v~~Ll~~  254 (299)
T 1s70_B          180 ----DARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIK-DYDGWTPLHAAAHWGKEEACRILVEN  254 (299)
T ss_dssp             ----HHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHT
T ss_pred             ----HHHHHHhccCcchhhhcCCCCCHHHHHHHCCcHHHHHHHHHcCCCCCCc-CCCCCcHHHHHHhcCCHHHHHHHHHc
Confidence                2233444444555567788999999999999999999999999998875 45699999999999999999999999


Q ss_pred             CCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHc
Q psy903          313 GADQEHKTDEMHTALMEASMDGHVEVAKLLLDS  345 (739)
Q Consensus       313 ~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~  345 (739)
                      |++++..+..|.||+++|.. +..+.++.+.+.
T Consensus       255 gad~~~~d~~g~t~l~~A~~-~~~~~l~~l~~~  286 (299)
T 1s70_B          255 LCDMEAVNKVGQTAFDVADE-DILGYLEELQKK  286 (299)
T ss_dssp             TCCTTCCCTTSCCTTTSCCS-GGGHHHHHHHHH
T ss_pred             CCCCCCcCCCCCCHHHHHHH-HHHHHHHHHHHH
Confidence            99999999999999999965 455666666554

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=100.00  E-value=1.1e-34  Score=271.77  Aligned_cols=212  Identities=24%  Similarity=0.255  Sum_probs=174.3

Q ss_pred             ccCCCCCcHHHHHHhcCcHHHHHHHHHccc----cccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhh
Q psy903           26 ETTDEGESLLSLACSAGYYELAQVLLAMHA----NVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVS  101 (739)
Q Consensus        26 ~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga----~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (739)
                      .+|.+|+||||+|+..|+.+++++|++.++    +++..+..+. ||||+|+                            
T Consensus         3 ~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~-t~L~~A~----------------------------   53 (236)
T 1ikn_D            3 QLTEDGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ-TPLHLAV----------------------------   53 (236)
T ss_dssp             ----CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCC-CHHHHHH----------------------------
T ss_pred             cCCCCCCchhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCC-CHHHHHH----------------------------
Confidence            578899999999999999999999998876    5666655543 5555555                            


Q ss_pred             chHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCC
Q psy903          102 CALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN  181 (739)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~  181 (739)
                                                    ..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.+++
T Consensus        54 ------------------------------~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~  103 (236)
T 1ikn_D           54 ------------------------------ITNQPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTT  103 (236)
T ss_dssp             ------------------------------HTTCHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTT
T ss_pred             ------------------------------HcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence                                          45578999999999999999999999999999999999999999999875


Q ss_pred             c-----cccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCC-CCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCC
Q psy903          182 V-----EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSS-SGNTPLMYACAGGHEAVVRVLLECGANVEDHNEN  255 (739)
Q Consensus       182 ~-----~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~-~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~  255 (739)
                      +     .......|.||||+|+..|+.+++++|+++|++++.++. .|.||||+|+..|+.+++++|+++|++++.+|..
T Consensus       104 ~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~  183 (236)
T 1ikn_D          104 PHLHSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQ  183 (236)
T ss_dssp             TSSSCGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTT
T ss_pred             hhHHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCC
Confidence            3     233445567999999999999999999999999999987 9999999999999999999999999999999999


Q ss_pred             CCcHHHHHHhcCChHHHHHHHHcCCCCcc-cCcCccCCHHHH
Q psy903          256 GHTPLMEAASAGHVGVAKILLEYGAGINT-HSNEFKESALTL  296 (739)
Q Consensus       256 ~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~-~~~~~~~~~l~~  296 (739)
                      |.|||++|+..|+.+++++|+++|++... ..+..+.++...
T Consensus       184 g~tpl~~A~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~  225 (236)
T 1ikn_D          184 GYSPYQLTWGRPSTRIQQQLGQLTLENLQMLPESEDEESYDT  225 (236)
T ss_dssp             CCCGGGGCTTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCC
T ss_pred             CCCHHHHHHccCchHHHHHHHHcchhhhhcCCccchHHHHhh
Confidence            99999999999999999999999986552 223334454443

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=2.6e-32  Score=236.91  Aligned_cols=159  Identities=35%  Similarity=0.573  Sum_probs=146.3

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHH
Q psy903          125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIE  204 (739)
Q Consensus       125 ~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~  204 (739)
                      ++|+.|++.|+.++|+.|++.|++++.+|..|.||||+|+..++.+++++|++.|++++..+.. |+||||+|+..|+.+
T Consensus         6 ~~L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~-g~TpLh~A~~~g~~~   84 (169)
T 4gpm_A            6 KRLIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSD-GRTPLHHAAENGHKE   84 (169)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccC-CCCHHHHHHHcCCHH
Confidence            5699999999999999999999999999999999999999999999999999999999887655 569999999999999


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcc
Q psy903          205 IVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINT  284 (739)
Q Consensus       205 ~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~  284 (739)
                      ++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|.|||++|+..|+.+++++|+++|++++-
T Consensus        85 ~v~~Ll~~gadvn~~d~~G~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~GA~ie~  164 (169)
T 4gpm_A           85 VVKLLISKGADVNAKDSDGRTPLHHAAENGHKEVVKLLISKGADVNTSDSDGRTPLDLAREHGNEEVVKLLEKQGGWLEH  164 (169)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC------
T ss_pred             HHHHHHHCcCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCC
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999998754

>4gpm_A Engineered protein OR264; de novo protein, structural genomics, PSI-biology, northeast structural genomics consortium, NESG; 2.00A {Synthetic construct} PDB: 4gmr_A

Probab=100.00  E-value=1.7e-32  Score=238.14  Aligned_cols=155  Identities=30%  Similarity=0.467  Sum_probs=85.7

Q ss_pred             hhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccc
Q psy903            2 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLA   81 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~   81 (739)
                      |+.||+.|++++|+.||+.|+++|.+|..|+||||+|+..++.+++++|+++|++++..+..|. ||||+|+..      
T Consensus         8 L~~Aa~~G~~~~v~~Ll~~Gadvn~~d~~g~t~l~~a~~~~~~~~~~~ll~~gad~~~~d~~g~-TpLh~A~~~------   80 (169)
T 4gpm_A            8 LIEAAENGNKDRVKDLIENGADVNASDSDGRTPLHHAAENGHKEVVKLLISKGADVNAKDSDGR-TPLHHAAEN------   80 (169)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHT------
T ss_pred             HHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHhcccchhhhccCCC-CHHHHHHHc------
Confidence            6667777777777777777777776666677777777777777777766666666665554443 444443332      


Q ss_pred             cCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHH
Q psy903           82 TGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS  161 (739)
Q Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~  161 (739)
                                                                          |+.+++++|++.|++++.+|..|.||||
T Consensus        81 ----------------------------------------------------g~~~~v~~Ll~~gadvn~~d~~G~TpLh  108 (169)
T 4gpm_A           81 ----------------------------------------------------GHKEVVKLLISKGADVNAKDSDGRTPLH  108 (169)
T ss_dssp             ----------------------------------------------------TCHHHHHHHHHTTCCTTCCCTTSCCHHH
T ss_pred             ----------------------------------------------------CCHHHHHHHHHCcCCCCCCCCCCCCHHH
Confidence                                                                2455555555555555555555555555


Q ss_pred             HHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCC
Q psy903          162 LACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADV  216 (739)
Q Consensus       162 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~  216 (739)
                      +|+..|+.++|++|++.|++++..+.. |+|||++|+..|+.+++++|+++|+++
T Consensus       109 ~A~~~g~~~~v~~Ll~~gad~~~~d~~-G~TpL~~A~~~g~~~iv~~Ll~~GA~i  162 (169)
T 4gpm_A          109 HAAENGHKEVVKLLISKGADVNTSDSD-GRTPLDLAREHGNEEVVKLLEKQGGWL  162 (169)
T ss_dssp             HHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHTC----
T ss_pred             HHHHcCCHHHHHHHHHcCCCccccCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCc
Confidence            555555555555555555444443322 234444444444444444444444444

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=100.00  E-value=7.2e-32  Score=246.11  Aligned_cols=191  Identities=24%  Similarity=0.342  Sum_probs=151.0

Q ss_pred             CCCCcHHHHHHhcCcHHHHHHHHHccc-cccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHH
Q psy903           29 DEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEA  107 (739)
Q Consensus        29 ~~g~t~L~~A~~~~~~~iv~~Ll~~ga-~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  107 (739)
                      ..+.||||.|+..|+.++++.|++.+. +++..+..+. ||||+|+..                                
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~-t~L~~A~~~--------------------------------   49 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGN-TPLNIAVHN--------------------------------   49 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSC-CHHHHHHHH--------------------------------
T ss_pred             cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCC-CHHHHHHHc--------------------------------
Confidence            356788888888888888888887766 7766665543 555555544                                


Q ss_pred             HHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHh-CCCCccccC
Q psy903          108 AAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLA-MHANVEDRG  186 (739)
Q Consensus       108 ~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~  186 (739)
                                                |+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++ .+.+++..+
T Consensus        50 --------------------------~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~~~~~~~~~~  103 (201)
T 3hra_A           50 --------------------------NDIEIAKALIDRGADINLQNSISDSPYLYAGAQGRTEILAYMLKHATPDLNKHN  103 (201)
T ss_dssp             --------------------------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCC
T ss_pred             --------------------------CCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHhccCccccccc
Confidence                                      46788888888888888888888888888888888888888884 444555444


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhcCc-----HHHHHHHHHCCCCCCCCCCCCCcHH
Q psy903          187 IKGECTPLMEAASSGFIEIVRLLINHG-ADVNGQSSSGNTPLMYACAGGH-----EAVVRVLLECGANVEDHNENGHTPL  260 (739)
Q Consensus       187 ~~~~~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~L~~A~~~~~-----~~~v~~Ll~~~~~~~~~~~~~~t~L  260 (739)
                       ..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+..++     .+++++|+++|++++.+|..|.|||
T Consensus       104 -~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l  182 (201)
T 3hra_A          104 -RYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIVKLLMENGADQSIKDNSGRTAM  182 (201)
T ss_dssp             -TTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred             -CCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHHHHHHHCCCCCCccCCCCCCHH
Confidence             34568888888888888888888887 8888888888888888888877     8888888888888888888888888


Q ss_pred             HHHHhcCChHHHHHHHHcC
Q psy903          261 MEAASAGHVGVAKILLEYG  279 (739)
Q Consensus       261 ~~A~~~~~~~ii~~Ll~~~  279 (739)
                      ++|+..|+.+++++|+++|
T Consensus       183 ~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          183 DYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HHHHHHTCHHHHHHHHTCC
T ss_pred             HHHHHcCCHhHHHHHHhcC
Confidence            8888888888888888765

>1ikn_D Protein (I-kappa-B-alpha), protein (NF-kappa-B P50D subunit); transcription factor, IKB/NFKB complex; 2.30A {Homo sapiens} SCOP: d.211.1.1 PDB: 1nfi_E

Probab=100.00  E-value=1.1e-33  Score=265.18  Aligned_cols=205  Identities=21%  Similarity=0.230  Sum_probs=182.5

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCC----CCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGR----SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG   76 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~----~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~   76 (739)
                      |||.|+..|+.++|++|++.+.    +++.++..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+..|
T Consensus        11 ~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~~~   89 (236)
T 1ikn_D           11 FLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGN-TPLHLACEQG   89 (236)
T ss_dssp             TTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCC-CHHHHHHHHT
T ss_pred             hhHHHHHcCChhHHHHHHHHhhccHHHhhccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCC-CHHHHHHHcC
Confidence            7999999999999999998665    7899999999999999999999999999999999998877665 7777766554


Q ss_pred             ccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCC------CC
Q psy903           77 FGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRS------VH  150 (739)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~------~~  150 (739)
                                                                                +.+++++|++.|.+      ++
T Consensus        90 ----------------------------------------------------------~~~~v~~Ll~~~~~~~~~~~~~  111 (236)
T 1ikn_D           90 ----------------------------------------------------------CLASVGVLTQSCTTPHLHSILK  111 (236)
T ss_dssp             ----------------------------------------------------------CHHHHHHHHHSTTTTSSSCGGG
T ss_pred             ----------------------------------------------------------CHHHHHHHHhcccchhHHHHhh
Confidence                                                                      78899999998875      46


Q ss_pred             cCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903          151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYA  230 (739)
Q Consensus       151 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A  230 (739)
                      ..+..|.||||+|+..|+.+++++|++.|++++..+...|.||||+|+..|+.+++++|+++|++++.++..|.||||+|
T Consensus       112 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A  191 (236)
T 1ikn_D          112 ATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLT  191 (236)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGC
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccCCCCCHHHHH
Confidence            67888999999999999999999999999999988875678999999999999999999999999999999999999999


Q ss_pred             HhcCcHHHHHHHHHCCCCCC--CCCCCCCcHHHHHH
Q psy903          231 CAGGHEAVVRVLLECGANVE--DHNENGHTPLMEAA  264 (739)
Q Consensus       231 ~~~~~~~~v~~Ll~~~~~~~--~~~~~~~t~L~~A~  264 (739)
                      +..|+.+++++|+++|++..  ..+..+.||...+.
T Consensus       192 ~~~~~~~~~~~Ll~~ga~~~~~~~~~~~~~~~~~~~  227 (236)
T 1ikn_D          192 WGRPSTRIQQQLGQLTLENLQMLPESEDEESYDTES  227 (236)
T ss_dssp             TTSSCHHHHHHHHTTSCGGGSSCCCCCTTTCCCCC-
T ss_pred             HccCchHHHHHHHHcchhhhhcCCccchHHHHhhhc
Confidence            99999999999999999765  67777887766543

>1sw6_A Regulatory protein SWI6; transcription regulation, ankyrin repeats, cell-cycle; 2.10A {Saccharomyces cerevisiae} SCOP: d.211.1.1

Probab=100.00  E-value=2.7e-34  Score=281.90  Aligned_cols=259  Identities=15%  Similarity=0.139  Sum_probs=200.5

Q ss_pred             HHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccC----------------CCCC
Q psy903          127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG----------------IKGE  190 (739)
Q Consensus       127 l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~----------------~~~~  190 (739)
                      ...++.....+++++|+++|++++..+..|.++++     |+.+++++|+++|++++...                ....
T Consensus        23 ~~~~~~~~~~dlv~~ll~~ga~i~~~~~~g~~~~~-----g~~~~v~~Ll~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~   97 (327)
T 1sw6_A           23 TAGPIITFTHDLTSDFLSSPLKIMKALPSPVVNDN-----EQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSN   97 (327)
T ss_dssp             --CCEEECCTTCCCSTTTSSCCCEECBCCCCCCCH-----HHHHHHHHHHHHHHC-------------------------
T ss_pred             cccchhhhcCchHHHHhhCCcccccCCCCCCcccC-----chhHHHHHHHHhccCCccccchHhhhcccccccccccCCc
Confidence            33344456678899999999999999999999987     99999999999997765411                0111


Q ss_pred             CcHHHHHHHcCcHHHHHHHHHCCCCCCC-CCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC-
Q psy903          191 CTPLMEAASSGFIEIVRLLINHGADVNG-QSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH-  268 (739)
Q Consensus       191 ~t~L~~A~~~~~~~~~~~Ll~~g~~~~~-~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~-  268 (739)
                      .+.+|.|+..+..+++++|++.|++++. +|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+ 
T Consensus        98 ~~~~~~a~~~~~~~~~~~l~~~g~dvn~~~d~~g~TpLh~Aa~~g~~~~v~~Ll~~Gad~n~~d~~g~TpLh~A~~~g~~  177 (327)
T 1sw6_A           98 QQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNN  177 (327)
T ss_dssp             ------CHHHHHHHHHHHCTTSCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCCCHHHHHHHSSHH
T ss_pred             cchhHHHHHhhHHHHHHHHHhcCCCcccccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhccc
Confidence            2345778888888999999999999999 89999999999999999999999999999999999999999999999998 


Q ss_pred             --hHHHHHHHHcC-CCCcccCcCccCCHHHHHHH----cCCHHHHHHHHHc--------------------CCCCCCCCC
Q psy903          269 --VGVAKILLEYG-AGINTHSNEFKESALTLACY----KGHLDMVRFLLSA--------------------GADQEHKTD  321 (739)
Q Consensus       269 --~~ii~~Ll~~~-~~~~~~~~~~~~~~l~~A~~----~~~~~~v~~Ll~~--------------------~~~~~~~~~  321 (739)
                        .++++.|++++ .+++. .+..|.||||+|+.    .|+.+++++|++.                    |++++..+.
T Consensus       178 ~~~~~~~~ll~~~~~~~~~-~d~~g~tpLh~A~~~~~~~g~~~~v~~Ll~~~~~~~~~~~~~~i~~~~~~~g~~~~~~~~  256 (327)
T 1sw6_A          178 YDSGTFEALLDYLYPCLIL-EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNG  256 (327)
T ss_dssp             HHTTCHHHHHHHHGGGGGE-ECTTCCCHHHHHHHHHTSTTCHHHHHHHHHHHHHHHHHGGGCCEEEC-------------
T ss_pred             ccHHHHHHHHHhhhccccC-CCCCCCCHHHHHHHHccccccHHHHHHHHHHHHHHHhcccchHHHhhhhcccCCcccccc
Confidence              78888888876 44554 45569999999999    8999999999987                    788888888


Q ss_pred             cCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCc
Q psy903          322 EMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVH  401 (739)
Q Consensus       322 ~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~  401 (739)
                      .|.|||+.|+.      +++|++.                                                     +++
T Consensus       257 ~g~t~L~~a~~------~~~Ll~~-----------------------------------------------------~~n  277 (327)
T 1sw6_A          257 ERKDSILENLD------LKWIIAN-----------------------------------------------------MLN  277 (327)
T ss_dssp             ---CHHHHHCS------HHHHHHH-----------------------------------------------------TTT
T ss_pred             cCCChhHHHHH------HHHHHHh-----------------------------------------------------CCC
Confidence            88899888764      5555553                                                     255


Q ss_pred             cCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHc
Q psy903          402 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS  451 (739)
Q Consensus       402 ~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~  451 (739)
                      .++..|.||||+|+..++.+++++|+++|++++..+..+ .||||+|+..
T Consensus       278 ~~d~~G~TpLh~A~~~g~~~~v~~Ll~~Gad~~~~d~~G-~TpL~~A~~~  326 (327)
T 1sw6_A          278 AQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSG-LRPVDFGAGL  326 (327)
T ss_dssp             CCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTS-CCGGGGTCC-
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCC-CCHHHHHHhc
Confidence            678889999999999999999999999999988887776 8999988754

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=100.00  E-value=1.3e-32  Score=261.49  Aligned_cols=197  Identities=26%  Similarity=0.250  Sum_probs=165.4

Q ss_pred             CCCcHHHHHHhcCcHH----HHHHHHHccccccc----cCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhh
Q psy903           30 EGESLLSLACSAGYYE----LAQVLLAMHANVED----RGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVS  101 (739)
Q Consensus        30 ~g~t~L~~A~~~~~~~----iv~~Ll~~ga~~~~----~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (739)
                      .|+||||.|+..|+.+    ++++|+++|++++.    .+..|. ||||+|+...                         
T Consensus         1 ~G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~-t~L~~A~~~~-------------------------   54 (256)
T 2etb_A            1 FDRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGK-TCLMKAVLNL-------------------------   54 (256)
T ss_dssp             CCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTB-CHHHHHHHTC-------------------------
T ss_pred             CCccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCC-CHHHHHHHcc-------------------------
Confidence            4899999999999997    66788889999987    565554 7777777650                         


Q ss_pred             chHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCc-----------CCCCCCcHHHHHHHcCcHH
Q psy903          102 CALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHE-----------TTDEGESLLSLACSAGYYE  170 (739)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~-----------~~~~g~t~L~~A~~~~~~~  170 (739)
                                                    ..|+.+++++|++.|++++.           .+..|.||||+|+..|+.+
T Consensus        55 ------------------------------~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~~  104 (256)
T 2etb_A           55 ------------------------------QDGVNACIMPLLQIDKDSGNPKPLVNAQCTDEFYQGHSALHIAIEKRSLQ  104 (256)
T ss_dssp             ------------------------------BTTBCTTHHHHHHHHHHTTCSSCGGGCCCCSTTTTTCCHHHHHHHTTCHH
T ss_pred             ------------------------------ccchHHHHHHHHhcCCcccchhhhcccccccccccCCCHHHHHHHcCCHH
Confidence                                          01466788888888776653           3367999999999999999


Q ss_pred             HHHHHHhCCCCccccCCCC------------CCcHHHHHHHcCcHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHh--c
Q psy903          171 LAQVLLAMHANVEDRGIKG------------ECTPLMEAASSGFIEIVRLLIN---HGADVNGQSSSGNTPLMYACA--G  233 (739)
Q Consensus       171 ~v~~Ll~~~~~~~~~~~~~------------~~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~t~L~~A~~--~  233 (739)
                      ++++|+++|++++..+...            |.||||+|+..|+.+++++|++   +|++++.+|..|+||||+|+.  .
T Consensus       105 ~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~ga~~n~~d~~g~TpLh~A~~~~~  184 (256)
T 2etb_A          105 CVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQPASLEATDSLGNTVLHALVMIAD  184 (256)
T ss_dssp             HHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHHCC
T ss_pred             HHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCcCccCCCCCCHHHHHHHccc
Confidence            9999999999988777652            6799999999999999999999   899999999999999999998  7


Q ss_pred             CcHH-------HHHHHHHCCCCC-------CCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCC
Q psy903          234 GHEA-------VVRVLLECGANV-------EDHNENGHTPLMEAASAGHVGVAKILLEYGAGI  282 (739)
Q Consensus       234 ~~~~-------~v~~Ll~~~~~~-------~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~  282 (739)
                      ++.+       ++++|+++|+++       +.+|..|.||||+|+..|+.+++++|+++|...
T Consensus       185 ~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~  247 (256)
T 2etb_A          185 NSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHILQREFSG  247 (256)
T ss_dssp             SCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHH
T ss_pred             CCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHHhCCCCC
Confidence            7888       999999999888       888999999999999999999999999887653

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.98  E-value=2.2e-32  Score=262.43  Aligned_cols=206  Identities=24%  Similarity=0.256  Sum_probs=148.8

Q ss_pred             cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHcc----ccccc----cCCCCCcchhHHHhhccccccccCCCCCCCHH
Q psy903           20 EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH----ANVED----RGIKGECTPLMEAASSGFGKLATGDGKLADPE   91 (739)
Q Consensus        20 ~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~g----a~~~~----~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~   91 (739)
                      .|+..+..|..|+||||+|+..|+.++|+.|++.+    ++++.    .+..+ .||||+|+...               
T Consensus         2 ~~a~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g-~tpL~~A~~~~---------------   65 (273)
T 2pnn_A            2 VSAGEKPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETG-KTCLLKAMLNL---------------   65 (273)
T ss_dssp             ---------CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTC-CCHHHHHHHSC---------------
T ss_pred             CcccCCCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCC-CCHHHHHHHHH---------------
Confidence            35566778999999999999999999999999854    44432    13333 36666666531               


Q ss_pred             HHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC-----------CcCCCCCCcHH
Q psy903           92 VLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSV-----------HETTDEGESLL  160 (739)
Q Consensus        92 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~-----------~~~~~~g~t~L  160 (739)
                                                              ..|+.+++++|++.|++.           ...+..|.|||
T Consensus        66 ----------------------------------------~~g~~~~v~~Ll~~ga~~~~~~~~i~~~~~~~d~~g~tpL  105 (273)
T 2pnn_A           66 ----------------------------------------HNGQNDTIALLLDVARKTDSLKQFVNASYTDSYYKGQTAL  105 (273)
T ss_dssp             ----------------------------------------BTTBCHHHHHHHHHHHHTTCHHHHHTCCCCSTTTTTCCHH
T ss_pred             ----------------------------------------hcCChHHHHHHHHhhccccchhHHhhcccccccCCCCCHH
Confidence                                                    125667777777766432           22556788899


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCccccCCC-------------CCCcHHHHHHHcCcHHHHHHHHH---CCCCCCCCCCCCC
Q psy903          161 SLACSAGYYELAQVLLAMHANVEDRGIK-------------GECTPLMEAASSGFIEIVRLLIN---HGADVNGQSSSGN  224 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-------------~~~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~  224 (739)
                      |+|+..|+.+++++|+++|++++..+..             .|.||||+|+..|+.+++++|++   +|++++.+|..|.
T Consensus       106 ~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~gad~~~~d~~g~  185 (273)
T 2pnn_A          106 HIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKFLLQNSWQPADISARDSVGN  185 (273)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSC
T ss_pred             HHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccCCCCceeeCCCCC
Confidence            9999889999999999888888777652             46688888888888888888888   7888888888888


Q ss_pred             cHHHHHHhcCc---------HHHHHHHHHCCCCCC-------CCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903          225 TPLMYACAGGH---------EAVVRVLLECGANVE-------DHNENGHTPLMEAASAGHVGVAKILLEYGAG  281 (739)
Q Consensus       225 t~L~~A~~~~~---------~~~v~~Ll~~~~~~~-------~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~  281 (739)
                      ||||+|+..|+         .+++++|+++|++++       .+|..|.||||+|+..|+.+++++|+++|+.
T Consensus       186 tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~ga~  258 (273)
T 2pnn_A          186 TVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKIGVLAYILQREIH  258 (273)
T ss_dssp             CHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHTC
T ss_pred             cHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChHHHHHHHHHCCCC
Confidence            88888888776         678888888877775       3777788888888888888888888887773

>3hra_A Ankyrin repeat family protein; structural protein; 1.69A {Enterococcus faecalis}

Probab=99.98  E-value=1.3e-30  Score=237.64  Aligned_cols=191  Identities=26%  Similarity=0.394  Sum_probs=146.2

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHhcCC-CCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHH
Q psy903          121 PQNERSLVQACSDGDVKTVKKLLTEGR-SVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS  199 (739)
Q Consensus       121 ~~~~~~l~~A~~~~~~~~~~~ll~~~~-~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~  199 (739)
                      ..+.++|+.|+..|+.+.++.|++.+. +++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+.
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~l~~A~~   81 (201)
T 3hra_A            3 TYEVGALLEAANQRDTKKVKEILQDTTYQVDEVDTEGNTPLNIAVHNNDIEIAKALIDRGADINLQNSI-SDSPYLYAGA   81 (201)
T ss_dssp             CCCTTHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHH
T ss_pred             cccccHHHHHHHhccHHHHHHHHHcCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHH
Confidence            346678888888888888888887765 77778888888888888888888888888888877766544 4588888888


Q ss_pred             cCcHHHHHHHH-HCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhcCC-----hHHH
Q psy903          200 SGFIEIVRLLI-NHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG-ANVEDHNENGHTPLMEAASAGH-----VGVA  272 (739)
Q Consensus       200 ~~~~~~~~~Ll-~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~-~~~~~~~~~~~t~L~~A~~~~~-----~~ii  272 (739)
                      .|+.+++++|+ ..+++++..+..|.||||+|+..|+.+++++|+++| ++++.++..|.||||+|+..++     .+++
T Consensus        82 ~~~~~~~~~Ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~~~~~~v  161 (201)
T 3hra_A           82 QGRTEILAYMLKHATPDLNKHNRYGGNALIPAAEKGHIDNVKLLLEDGREDIDFQNDFGYTALIEAVGLREGNQLYQDIV  161 (201)
T ss_dssp             TTCHHHHHHHHHHSCCCTTCCCTTSCCSHHHHHHTTCHHHHHHHHHHCCCCTTCCCTTSCCHHHHHHHSSCCSHHHHHHH
T ss_pred             cCCHHHHHHHHhccCcccccccCCCCcHHHHHHHcCCHHHHHHHHHcCCCCcCCCCCCCCCHHHHHHHhccchhhHHHHH
Confidence            88888888888 556677778888888888888888888888888877 7777788888888888887776     7777


Q ss_pred             HHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcC
Q psy903          273 KILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG  313 (739)
Q Consensus       273 ~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~  313 (739)
                      ++|+++|++++.. +..|.|||++|+..|+.+++++|+++|
T Consensus       162 ~~Ll~~ga~~~~~-~~~g~t~l~~A~~~~~~~~~~~Ll~~G  201 (201)
T 3hra_A          162 KLLMENGADQSIK-DNSGRTAMDYANQKGYTEISKILAQYN  201 (201)
T ss_dssp             HHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHTCC
T ss_pred             HHHHHCCCCCCcc-CCCCCCHHHHHHHcCCHhHHHHHHhcC
Confidence            7777777776654 344777777777777777777777654

>2etb_A Transient receptor potential cation channel subfamily V member 2; TRPV2, ankyrin repeat domain, transport protein; 1.65A {Rattus norvegicus} PDB: 2eta_A 2etc_A 2f37_A

Probab=99.97  E-value=1.9e-31  Score=253.35  Aligned_cols=192  Identities=23%  Similarity=0.272  Sum_probs=153.7

Q ss_pred             CchHHHHHHHcCCHH----HHHHHHhcCCCCCc----CCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCccccC-----
Q psy903          123 NERSLVQACSDGDVK----TVKKLLTEGRSVHE----TTDEGESLLSLACSA---GYYELAQVLLAMHANVEDRG-----  186 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~----~~~~ll~~~~~~~~----~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~-----  186 (739)
                      +.|+|+.|+..|+.+    ++++|++.|++++.    .+..|.||||+|+..   |+.+++++|++.|++++...     
T Consensus         2 G~t~L~~A~~~g~~~~v~~ll~~l~~~g~~i~~~~~~~d~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~~~   81 (256)
T 2etb_A            2 DRDRLFSVVSRGVPEELTGLLEYLRWNSKYLTDSAYTEGSTGKTCLMKAVLNLQDGVNACIMPLLQIDKDSGNPKPLVNA   81 (256)
T ss_dssp             CHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSBTTTTBCHHHHHHHTCBTTBCTTHHHHHHHHHHTTCSSCGGGC
T ss_pred             CccHHHHHHHcCCHHHHHHHHHHHHHcCCCcccccccCCCCCCCHHHHHHHccccchHHHHHHHHhcCCcccchhhhccc
Confidence            678999999999997    66777788999998    899999999999999   99999999999987765332     


Q ss_pred             -----CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCC-------------CCcHHHHHHhcCcHHHHHHHHH---C
Q psy903          187 -----IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSS-------------GNTPLMYACAGGHEAVVRVLLE---C  245 (739)
Q Consensus       187 -----~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-------------~~t~L~~A~~~~~~~~v~~Ll~---~  245 (739)
                           +..|.||||+|+..|+.+++++|+++|++++.++..             |.||||+|+..|+.+++++|++   +
T Consensus        82 ~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~~~v~~Ll~~~~~  161 (256)
T 2etb_A           82 QCTDEFYQGHSALHIAIEKRSLQCVKLLVENGADVHLRACGRFFQKHQGTCFYFGELPLSLAACTKQWDVVTYLLENPHQ  161 (256)
T ss_dssp             CCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCCSGGGSCCSSSCCCSCSSHHHHHHHTTCHHHHHHHHHCSSC
T ss_pred             ccccccccCCCHHHHHHHcCCHHHHHHHHHcCCCCCcccccccccccccccccCCCCHHHHHHHcCCHHHHHHHHhcccc
Confidence                 244679999999999999999999999999888876             8899999999999999999998   8


Q ss_pred             CCCCCCCCCCCCcHHHHHHh--cCChH-------HHHHHHHcCCCCc------ccCcCccCCHHHHHHHcCCHHHHHHHH
Q psy903          246 GANVEDHNENGHTPLMEAAS--AGHVG-------VAKILLEYGAGIN------THSNEFKESALTLACYKGHLDMVRFLL  310 (739)
Q Consensus       246 ~~~~~~~~~~~~t~L~~A~~--~~~~~-------ii~~Ll~~~~~~~------~~~~~~~~~~l~~A~~~~~~~~v~~Ll  310 (739)
                      |++++.+|..|.||||+|+.  .++.+       ++++|+++|++++      ...+..|.||||+|+..|+.+++++|+
T Consensus       162 ga~~n~~d~~g~TpLh~A~~~~~~~~~~~~~~~~iv~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll  241 (256)
T 2etb_A          162 PASLEATDSLGNTVLHALVMIADNSPENSALVIHMYDGLLQMGARLCPTVQLEEISNHQGLTPLKLAAKEGKIEIFRHIL  241 (256)
T ss_dssp             CCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHSTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHH
T ss_pred             CCCcCccCCCCCCHHHHHHHcccCCchhhHHHHHHHHHHHHcCCCcccccccccccCCCCCCHHHHHHHhCCHHHHHHHH
Confidence            88888888888899998888  67777       6677766666552      123344566666666666666666666


Q ss_pred             HcCC
Q psy903          311 SAGA  314 (739)
Q Consensus       311 ~~~~  314 (739)
                      ++|.
T Consensus       242 ~~g~  245 (256)
T 2etb_A          242 QREF  245 (256)
T ss_dssp             HHHH
T ss_pred             hCCC
Confidence            5543

>2pnn_A Transient receptor potential cation channel subfa member 1; TRPV1, ankyrin repeat domain, transport protein; HET: ATP; 2.70A {Rattus norvegicus} PDB: 2nyj_A*

Probab=99.97  E-value=2.2e-31  Score=255.52  Aligned_cols=210  Identities=22%  Similarity=0.342  Sum_probs=164.9

Q ss_pred             CCCCCCCchHHHHHHHcCCHHHHHHHHh----cCCCCC----cCCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCcc--
Q psy903          117 ENPRPQNERSLVQACSDGDVKTVKKLLT----EGRSVH----ETTDEGESLLSLACSA---GYYELAQVLLAMHANVE--  183 (739)
Q Consensus       117 ~~~~~~~~~~l~~A~~~~~~~~~~~ll~----~~~~~~----~~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~--  183 (739)
                      ...+..+.|+|+.|+..|+.++++.|++    .+.+++    ..+..|.||||+|+..   |+.+++++|++.|+++.  
T Consensus         7 ~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~~~~g~~~~v~~Ll~~ga~~~~~   86 (273)
T 2pnn_A            7 KPPRLYDRRSIFDAVAQSNCQELESLLPFLQRSKKRLTDSEFKDPETGKTCLLKAMLNLHNGQNDTIALLLDVARKTDSL   86 (273)
T ss_dssp             ----CCCHHHHHHHHHTTCSSTTTTHHHHHHHSCCCTTSGGGSCTTTCCCHHHHHHHSCBTTBCHHHHHHHHHHHHTTCH
T ss_pred             CCCCcccchHHHHHHHcCCHHHHHHHHHHHhhcccccCCcccccCcCCCCHHHHHHHHHhcCChHHHHHHHHhhccccch
Confidence            3456678999999999999998888886    566665    3577899999999986   99999999999886532  


Q ss_pred             -----c--c-CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCC--------------CCCcHHHHHHhcCcHHHHHH
Q psy903          184 -----D--R-GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSS--------------SGNTPLMYACAGGHEAVVRV  241 (739)
Q Consensus       184 -----~--~-~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~--------------~~~t~L~~A~~~~~~~~v~~  241 (739)
                           .  . .+..|.||||+|+..|+.+++++|+++|++++.++.              .|.||||+|+..|+.+++++
T Consensus        87 ~~~i~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~  166 (273)
T 2pnn_A           87 KQFVNASYTDSYYKGQTALHIAIERRNMTLVTLLVENGADVQAAANGDFFKKTKGRPGFYFGELPLSLAACTNQLAIVKF  166 (273)
T ss_dssp             HHHHTCCCCSTTTTTCCHHHHHHHTTCHHHHHHHHHTTCCTTCCBCSGGGSSCSSSCCCCSCBSHHHHHHHTTCHHHHHH
T ss_pred             hHHhhcccccccCCCCCHHHHHHHcCCHHHHHHHHHCCCCcCccccccccccccccccccCCCCHHHHHHHcCCHHHHHH
Confidence                 1  1 224567999999999999999999999999998886              79999999999999999999


Q ss_pred             HHH---CCCCCCCCCCCCCcHHHHHHhcCC---------hHHHHHHHHcCCCCcc------cCcCccCCHHHHHHHcCCH
Q psy903          242 LLE---CGANVEDHNENGHTPLMEAASAGH---------VGVAKILLEYGAGINT------HSNEFKESALTLACYKGHL  303 (739)
Q Consensus       242 Ll~---~~~~~~~~~~~~~t~L~~A~~~~~---------~~ii~~Ll~~~~~~~~------~~~~~~~~~l~~A~~~~~~  303 (739)
                      |++   +|++++.+|..|.||||+|+..|+         .+++++|+++|++++.      ..+..|.||||+|+..|+.
T Consensus       167 Ll~~~~~gad~~~~d~~g~tpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~n~~~~~~~~~d~~g~TpL~~A~~~g~~  246 (273)
T 2pnn_A          167 LLQNSWQPADISARDSVGNTVLHALVEVADNTVDNTKFVTSMYNEILILGAKLHPTLKLEEITNRKGLTPLALAASSGKI  246 (273)
T ss_dssp             HHHCSSCCCCTTCCCTTSCCHHHHHHHHCCSCHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCH
T ss_pred             HHhcccCCCCceeeCCCCCcHHHHHHHccCcchhHHHHHHHHHHHHHHhhhhcccccccccccCCCCCCHHHHHHHhChH
Confidence            999   899999999999999999999887         7889999988887763      3566688999999999999


Q ss_pred             HHHHHHHHcCC-CCCCCCCcCCcH
Q psy903          304 DMVRFLLSAGA-DQEHKTDEMHTA  326 (739)
Q Consensus       304 ~~v~~Ll~~~~-~~~~~~~~~~~~  326 (739)
                      +++++|+++|+ ++......+.+|
T Consensus       247 ~iv~~Ll~~ga~dp~~~~~~~~~~  270 (273)
T 2pnn_A          247 GVLAYILQREIHEPECRHAAAHHH  270 (273)
T ss_dssp             HHHHHHHHHHTC------------
T ss_pred             HHHHHHHHCCCCCchhhhhhhhhc
Confidence            99999998888 666555544433

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.97  E-value=1.1e-30  Score=248.98  Aligned_cols=202  Identities=24%  Similarity=0.210  Sum_probs=162.9

Q ss_pred             CCCCCcHHHHHHhcCcHHH----HHHHHHccccccccCC---CCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhh
Q psy903           28 TDEGESLLSLACSAGYYEL----AQVLLAMHANVEDRGI---KGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSV  100 (739)
Q Consensus        28 ~~~g~t~L~~A~~~~~~~i----v~~Ll~~ga~~~~~~~---~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (739)
                      +..|+||||.|+..|+.+.    +++|++.|++++..+.   ..|.||||+|+...                        
T Consensus         2 ~~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~------------------------   57 (260)
T 3jxi_A            2 KVFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNL------------------------   57 (260)
T ss_dssp             CCCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSC------------------------
T ss_pred             ccchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHh------------------------
Confidence            3568999999999999995    5555559999987662   22348888777320                        


Q ss_pred             hchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCC-----------CCCcCCCCCCcHHHHHHHcCcH
Q psy903          101 SCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGR-----------SVHETTDEGESLLSLACSAGYY  169 (739)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~-----------~~~~~~~~g~t~L~~A~~~~~~  169 (739)
                                                     ..|+.+++++|++.|+           ..+..+..|.||||+|+..|+.
T Consensus        58 -------------------------------~~g~~~~v~~Ll~~g~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~~g~~  106 (260)
T 3jxi_A           58 -------------------------------SAGRNDTIPILLDIAEKTGNMREFINSPFRDVYYRGQTALHIAIERRCK  106 (260)
T ss_dssp             -------------------------------BTTBCTHHHHHHHHHHHTTCHHHHHTCCBCCSSEESBCHHHHHHHTTCH
T ss_pred             -------------------------------hcCCHHHHHHHHHhcccccchHhhhcccccccccCCCCHHHHHHHcCCH
Confidence                                           2345666666766553           3445566899999999999999


Q ss_pred             HHHHHHHhCCCCccccCC-------------CCCCcHHHHHHHcCcHHHHHHHHH---CCCCCCCCCCCCCcHHHHHHhc
Q psy903          170 ELAQVLLAMHANVEDRGI-------------KGECTPLMEAASSGFIEIVRLLIN---HGADVNGQSSSGNTPLMYACAG  233 (739)
Q Consensus       170 ~~v~~Ll~~~~~~~~~~~-------------~~~~t~L~~A~~~~~~~~~~~Ll~---~g~~~~~~~~~~~t~L~~A~~~  233 (739)
                      ++|++|++.|++++..+.             ..|.||||+|+..|+.+++++|++   +|++++.+|..|+||||+|+..
T Consensus       107 ~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~~~~ga~~~~~d~~g~TpLh~A~~~  186 (260)
T 3jxi_A          107 HYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTENGHKQADLRRQDSRGNTVLHALVAI  186 (260)
T ss_dssp             HHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHCSSCCCCTTCCCTTSCCHHHHHHHH
T ss_pred             HHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhccccCCCCcccCCCCCcHHHHHHHh
Confidence            999999999999887764             456799999999999999999999   8999999999999999999987


Q ss_pred             Cc---------HHHHHHHHHCCCCC-------CCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcc
Q psy903          234 GH---------EAVVRVLLECGANV-------EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINT  284 (739)
Q Consensus       234 ~~---------~~~v~~Ll~~~~~~-------~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~  284 (739)
                      ++         .+++++|+++|+++       +..|..|.||||+|+..|+.+++++|+++|+....
T Consensus       187 ~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~~Ll~~g~~~~~  253 (260)
T 3jxi_A          187 ADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQHIIRREIADAA  253 (260)
T ss_dssp             CCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHHHHHHC
T ss_pred             ccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHHHHHHhCCCccc
Confidence            77         68999999999887       67889999999999999999999999988765443

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.97  E-value=2.6e-30  Score=246.82  Aligned_cols=143  Identities=29%  Similarity=0.421  Sum_probs=79.5

Q ss_pred             CHHHHHHHHhcCC-CCCcCCCCCCcHHHHHH-----HcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHH
Q psy903          135 DVKTVKKLLTEGR-SVHETTDEGESLLSLAC-----SAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRL  208 (739)
Q Consensus       135 ~~~~~~~ll~~~~-~~~~~~~~g~t~L~~A~-----~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~  208 (739)
                      +.+++++|++.|+ +++..+..|.||||+|+     ..++.+++++|++.|...+..+ ..|.||||+|+..|+.+++++
T Consensus       123 ~~~~v~~Ll~~g~~~~~~~~~~g~tpL~~a~~~~~~~~~~~~~v~~Ll~~g~~~~~~~-~~g~tpLh~A~~~g~~~~v~~  201 (276)
T 4hbd_A          123 NFPVVQQLLDSGVCKVDKQNRAGYSPIMLTALATLKTQDDIETVLQLFRLGNINAKAS-QAGQTALMLAVSHGRVDVVKA  201 (276)
T ss_dssp             CHHHHHHHHHTSCCCTTCCCTTSCCHHHHGGGCCCCSHHHHHHHHHHHHHSCTTCCCT-TTCCCHHHHHHHTTCHHHHHH
T ss_pred             CHHHHHHHHHCCCCcCCCCCCCCCCHHHHHHHHHhhhhhhHHHHHHHHHcCCCccccC-CCCCCHHHHHHHcCCHHHHHH
Confidence            3444555555544 45555555555555555     3345555555555554443332 223455555555555555556


Q ss_pred             HHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          209 LINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE-CGANVEDHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       209 Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                      |+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.+|..|.|||++|+..|+.+++++|+++
T Consensus       202 Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~d~~g~TpL~~A~~~g~~~iv~~Ll~~  272 (276)
T 4hbd_A          202 LLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLTDRDGSTALMVALDAGQSEIASMLYSR  272 (276)
T ss_dssp             HHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred             HHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCcCCCCCCHHHHHHHcCCHHHHHHHHhc
Confidence            656666666666666666666666666666666665 5666666666666666666666666666666654

>3jxi_A Vanilloid receptor-related osmotically activated protein; ankyrin repeats, ANK repeat, ION transport, ionic channel, R transmembrane, transport; 2.30A {Gallus gallus} PDB: 3jxj_A 4dx1_A 4dx2_A*

Probab=99.96  E-value=6.8e-30  Score=243.39  Aligned_cols=196  Identities=23%  Similarity=0.265  Sum_probs=152.4

Q ss_pred             CCCchHHHHHHHcCCHHHH----HHHHhcCCCCCcCC----CCCCcHHHHHH---HcCcHHHHHHHHhCCCCccc-----
Q psy903          121 PQNERSLVQACSDGDVKTV----KKLLTEGRSVHETT----DEGESLLSLAC---SAGYYELAQVLLAMHANVED-----  184 (739)
Q Consensus       121 ~~~~~~l~~A~~~~~~~~~----~~ll~~~~~~~~~~----~~g~t~L~~A~---~~~~~~~v~~Ll~~~~~~~~-----  184 (739)
                      ..+.++|+.|+..|+.+.+    ++|++.|.+++..+    ..|.||||+|+   ..|+.+++++|++.|+++..     
T Consensus         3 ~~~~~~L~~A~~~g~~~~v~~ll~~l~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~g~~~~v~~Ll~~g~~~~~~~~~~   82 (260)
T 3jxi_A            3 VFNRPILFDIVSRGSPDGLEGLLSFLLTHKKRLTDEEFREPSTGKTCLPKALLNLSAGRNDTIPILLDIAEKTGNMREFI   82 (260)
T ss_dssp             CCCHHHHHHHHHHTCGGGGTTHHHHHHHHTCCTTSGGGSCTTTCCCHHHHHHTSCBTTBCTHHHHHHHHHHHTTCHHHHH
T ss_pred             cchHHHHHHHHHhCCHHHHHHHHHHHHhcCCCcchhhhhccCCCCcHHHHHHHHhhcCCHHHHHHHHHhcccccchHhhh
Confidence            4578899999999999954    44445899888766    66999999999   67999999999998754221     


Q ss_pred             -----cCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC--------------CCCCcHHHHHHhcCcHHHHHHHHH-
Q psy903          185 -----RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS--------------SSGNTPLMYACAGGHEAVVRVLLE-  244 (739)
Q Consensus       185 -----~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~--------------~~~~t~L~~A~~~~~~~~v~~Ll~-  244 (739)
                           ..+..|+||||+|+..|+.+++++|+++|++++.++              ..|.||||+|+..|+.+++++|++ 
T Consensus        83 ~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~g~tpL~~A~~~g~~~~v~~Ll~~  162 (260)
T 3jxi_A           83 NSPFRDVYYRGQTALHIAIERRCKHYVELLVEKGADVHAQARGRFFQPKDEGGYFYFGELPLSLAACTNQPHIVHYLTEN  162 (260)
T ss_dssp             TCCBCCSSEESBCHHHHHHHTTCHHHHHHHHHTTCCTTCCCEECCCSSSCCCCSCCSCSSHHHHHHHTTCHHHHHHHHHC
T ss_pred             cccccccccCCCCHHHHHHHcCCHHHHHHHHhCCCCcCccccccccCcccccccccCCCCHHHHHHHcCCHHHHHHHHhc
Confidence                 112246799999999999999999999999998888              678899999999999999999998 


Q ss_pred             --CCCCCCCCCCCCCcHHHHHHhcCC---------hHHHHHHHHcCCCCc------ccCcCccCCHHHHHHHcCCHHHHH
Q psy903          245 --CGANVEDHNENGHTPLMEAASAGH---------VGVAKILLEYGAGIN------THSNEFKESALTLACYKGHLDMVR  307 (739)
Q Consensus       245 --~~~~~~~~~~~~~t~L~~A~~~~~---------~~ii~~Ll~~~~~~~------~~~~~~~~~~l~~A~~~~~~~~v~  307 (739)
                        +|++++.+|..|.||||+|+..++         .+++++|+++|++++      ...+..|.||||+|+..|+.++++
T Consensus       163 ~~~ga~~~~~d~~g~TpLh~A~~~~~~~~~~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~d~~g~tpL~~A~~~g~~~~v~  242 (260)
T 3jxi_A          163 GHKQADLRRQDSRGNTVLHALVAIADNTRENTKFVTKMYDLLLIKCAKLFPDTNLEALLNNDGLSPLMMAAKTGKIGIFQ  242 (260)
T ss_dssp             SSCCCCTTCCCTTSCCHHHHHHHHCCSSHHHHHHHHHHHHHHHHHHHHHCTTCCGGGCCCTTSCCHHHHHHHTTCHHHHH
T ss_pred             cccCCCCcccCCCCCcHHHHHHHhccCchhHHHHHHHHHHHHHHhCcccccccchhhcccCCCCCHHHHHHHcCCHHHHH
Confidence              888888888888999999887776         577777777776653      123445666777777777777777


Q ss_pred             HHHHcCCCC
Q psy903          308 FLLSAGADQ  316 (739)
Q Consensus       308 ~Ll~~~~~~  316 (739)
                      +|+++|.+.
T Consensus       243 ~Ll~~g~~~  251 (260)
T 3jxi_A          243 HIIRREIAD  251 (260)
T ss_dssp             HHHHHHHHH
T ss_pred             HHHHhCCCc
Confidence            776665443

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.96  E-value=2.4e-28  Score=214.86  Aligned_cols=161  Identities=33%  Similarity=0.452  Sum_probs=146.4

Q ss_pred             CCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHH
Q psy903          118 NPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEA  197 (739)
Q Consensus       118 ~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A  197 (739)
                      .+.....++|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|
T Consensus         9 ~~~~~~~~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A   87 (169)
T 2y1l_E            9 HHGSDLGKKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHA-GMTPLRLA   87 (169)
T ss_dssp             ----CHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHH
T ss_pred             cCCCcccchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCC-CCCHHHHH
Confidence            44556788999999999999999999999999999999999999999999999999999999998877654 46999999


Q ss_pred             HHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903          198 ASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE  277 (739)
Q Consensus       198 ~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~  277 (739)
                      +..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|++
T Consensus        88 ~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~  167 (169)
T 2y1l_E           88 ALFGHLEIVEVLLKNGADVNANDMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQK  167 (169)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             HHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cC
Q psy903          278 YG  279 (739)
Q Consensus       278 ~~  279 (739)
                      +|
T Consensus       168 ~G  169 (169)
T 2y1l_E          168 LN  169 (169)
T ss_dssp             C-
T ss_pred             cC
Confidence            75

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.96  E-value=8.5e-29  Score=223.29  Aligned_cols=174  Identities=29%  Similarity=0.395  Sum_probs=122.7

Q ss_pred             CHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCC
Q psy903           10 DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLAD   89 (739)
Q Consensus        10 ~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~   89 (739)
                      +.+.++..++  ..+|.+|..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+..              
T Consensus        16 ~~~~i~~~~~--~~~n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~-t~L~~A~~~--------------   78 (192)
T 2rfm_A           16 DEKSINQNLD--FLRNYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGS-TALIWAVKN--------------   78 (192)
T ss_dssp             SHHHHHHTHH--HHHTCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSC-CHHHHHHHT--------------
T ss_pred             hhhhhhhhhH--HHHhCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCc-cHHHHHHHc--------------
Confidence            3344444443  23567888999999999999999999999999998877665554 555555543              


Q ss_pred             HHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcH
Q psy903           90 PEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYY  169 (739)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~  169 (739)
                                                                  |+.+++++|++.|++++..+..|.||||+|+..|+.
T Consensus        79 --------------------------------------------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~  114 (192)
T 2rfm_A           79 --------------------------------------------NRLGIAEKLLSKGSNVNTKDFSGKTPLMWSIIFGYS  114 (192)
T ss_dssp             --------------------------------------------TCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             --------------------------------------------CCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCCH
Confidence                                                        467777888887877777777777777777777777


Q ss_pred             HHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHC
Q psy903          170 ELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC  245 (739)
Q Consensus       170 ~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~  245 (739)
                      +++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++
T Consensus       115 ~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  189 (192)
T 2rfm_A          115 EMSYFLLEHGANVNDRNLE-GETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFTEV  189 (192)
T ss_dssp             HHHHHHHHTTCCSSCCCTT-CCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHH
T ss_pred             HHHHHHHHCCCCCCCCCCC-CCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHHhc
Confidence            7777777777666655433 34677777766666677666666666666666666666666666666666666654

>4hbd_A KN motif and ankyrin repeat domain-containing Pro; structural genomics consortium, SGC, protein binding; 1.72A {Homo sapiens}

Probab=99.96  E-value=4.4e-29  Score=238.26  Aligned_cols=176  Identities=27%  Similarity=0.375  Sum_probs=141.9

Q ss_pred             HHHHHHHHhcCCC--CCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCC-CccccCCCCCCcHHHHHH-----HcCcHHHHH
Q psy903          136 VKTVKKLLTEGRS--VHETTDEGESLLSLACSAGYYELAQVLLAMHA-NVEDRGIKGECTPLMEAA-----SSGFIEIVR  207 (739)
Q Consensus       136 ~~~~~~ll~~~~~--~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~~t~L~~A~-----~~~~~~~~~  207 (739)
                      .+.++.+++.+.+  ++..|..|.||||+|+..|+.+++++|++.|+ +++..+ ..|+||||+|+     ..++.++++
T Consensus        89 ~~~~~~l~~~~~~~~~n~~d~~g~T~Lh~A~~~g~~~~v~~Ll~~g~~~~~~~~-~~g~tpL~~a~~~~~~~~~~~~~v~  167 (276)
T 4hbd_A           89 LVTFRAMSARLLDYVVNIADSNGNTALHYSVSHANFPVVQQLLDSGVCKVDKQN-RAGYSPIMLTALATLKTQDDIETVL  167 (276)
T ss_dssp             HHHHHHHCHHHHHHHHTCCCTTSCCHHHHHHHTTCHHHHHHHHHTSCCCTTCCC-TTSCCHHHHGGGCCCCSHHHHHHHH
T ss_pred             HHHHHHHHHHHHhhcCcCCCCCCCCHHHHHHHCCCHHHHHHHHHCCCCcCCCCC-CCCCCHHHHHHHHHhhhhhhHHHHH
Confidence            3444444444333  66778888888888888888888888888887 555444 44578888888     567888888


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH-cCCCCcccC
Q psy903          208 LLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE-YGAGINTHS  286 (739)
Q Consensus       208 ~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~-~~~~~~~~~  286 (739)
                      +|++.|.+++..+..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|++ .|++++.. 
T Consensus       168 ~Ll~~g~~~~~~~~~g~tpLh~A~~~g~~~~v~~Ll~~gad~n~~d~~G~TpLh~A~~~g~~~iv~~Ll~~~gad~~~~-  246 (276)
T 4hbd_A          168 QLFRLGNINAKASQAGQTALMLAVSHGRVDVVKALLACEADVNVQDDDGSTALMCACEHGHKEIAGLLLAVPSCDISLT-  246 (276)
T ss_dssp             HHHHHSCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHTSTTCCTTCC-
T ss_pred             HHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHHHhCCCCCCCCCCCCCCHHHHHHHCCCHHHHHHHHhcCCCCCcCc-
Confidence            8888888888888888888888888888888888888888888888888888888888888888888888 78887764 


Q ss_pred             cCccCCHHHHHHHcCCHHHHHHHHHcC
Q psy903          287 NEFKESALTLACYKGHLDMVRFLLSAG  313 (739)
Q Consensus       287 ~~~~~~~l~~A~~~~~~~~v~~Ll~~~  313 (739)
                      +..|.|||++|+..|+.+++++|++++
T Consensus       247 d~~g~TpL~~A~~~g~~~iv~~Ll~~~  273 (276)
T 4hbd_A          247 DRDGSTALMVALDAGQSEIASMLYSRM  273 (276)
T ss_dssp             CTTSCCHHHHHHHHTCHHHHHHHHHHC
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHhcc
Confidence            455888888888888888888888764

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.96  E-value=3e-28  Score=214.20  Aligned_cols=160  Identities=27%  Similarity=0.390  Sum_probs=144.0

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903          122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG  201 (739)
Q Consensus       122 ~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~  201 (739)
                      .+.|+|+.|+..|+.+++++|++.|.+++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|
T Consensus         2 ~~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~   80 (167)
T 3v31_A            2 ANSLSVHQLAAQGEMLYLATRIEQENVINHTDEEGFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKG-RESALSLACSKG   80 (167)
T ss_dssp             TTCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHHT
T ss_pred             CCcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcC
Confidence            3578899999999999999999999999999999999999999999999999999999888777644 469999999999


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903          202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG  281 (739)
Q Consensus       202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~  281 (739)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.|||++|+..|+.+++++|++++.+
T Consensus        81 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~  160 (167)
T 3v31_A           81 YTDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIETDSGYNSMDLAVALGYRSVQQVIESHLLK  160 (167)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             CHHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999987654


Q ss_pred             C
Q psy903          282 I  282 (739)
Q Consensus       282 ~  282 (739)
                      .
T Consensus       161 ~  161 (167)
T 3v31_A          161 L  161 (167)
T ss_dssp             H
T ss_pred             H
Confidence            4

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.96  E-value=3.9e-28  Score=212.51  Aligned_cols=158  Identities=29%  Similarity=0.386  Sum_probs=126.7

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903          122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG  201 (739)
Q Consensus       122 ~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~  201 (739)
                      ...++|+.|+..|+.+++++|++.|++++..+..|.||||+|+. |+.+++++|++.|++++..+.. |.||||+|+..|
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~   81 (162)
T 1ihb_A            4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKL-GNPEIARRLLLRGANPDLKDRT-GFAVIHDAARAG   81 (162)
T ss_dssp             -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHT
T ss_pred             hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCccCccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcC
Confidence            34678888888888888888888888888888888888888887 8888888888888877766544 458888888888


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCC-CCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903          202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN-VEDHNENGHTPLMEAASAGHVGVAKILLEYGA  280 (739)
Q Consensus       202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~-~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~  280 (739)
                      +.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++ ++..+..|.|||++|+..|+.+++++|+++|+
T Consensus        82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA  161 (162)
T 1ihb_A           82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA  161 (162)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred             CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence            88888888888888888888888888888888888888888888877 47778888888888888888888888888775


Q ss_pred             C
Q psy903          281 G  281 (739)
Q Consensus       281 ~  281 (739)
                      +
T Consensus       162 d  162 (162)
T 1ihb_A          162 G  162 (162)
T ss_dssp             -
T ss_pred             C
Confidence            3

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.96  E-value=1.7e-31  Score=246.34  Aligned_cols=207  Identities=17%  Similarity=0.121  Sum_probs=171.8

Q ss_pred             HHHHHHcCCCCccc---CCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCH
Q psy903           14 VKKLLTEGRSVHET---TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADP   90 (739)
Q Consensus        14 v~~ll~~g~~~~~~---~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~   90 (739)
                      |+.|+++|++++..   +..|.||||+|+..|+.++|++|+++|++++..+..|. ||||+|+..               
T Consensus         1 v~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~-tpLh~A~~~---------------   64 (229)
T 2vge_A            1 MRSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGI-TALHNAICG---------------   64 (229)
T ss_dssp             ---------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSC-CHHHHHHHT---------------
T ss_pred             CeehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCC-CHHHHHHHc---------------
Confidence            57889999887654   45677889999999999999999999999998877665 777666654               


Q ss_pred             HHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHH
Q psy903           91 EVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYE  170 (739)
Q Consensus        91 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~  170 (739)
                                                                 |+.+++++|++.|++++..|..|.||||+|+..|+.+
T Consensus        65 -------------------------------------------g~~~~v~~Ll~~ga~~n~~d~~g~tpLh~A~~~g~~~  101 (229)
T 2vge_A           65 -------------------------------------------ANYSIVDFLITAGANVNSPDSHGWTPLHCAASCNDTV  101 (229)
T ss_dssp             -------------------------------------------TCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHH
T ss_pred             -------------------------------------------CCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHH
Confidence                                                       4789999999999999999999999999999999999


Q ss_pred             HHHHHHhCCCCccccCCCCCCcHHHHH--HHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCC
Q psy903          171 LAQVLLAMHANVEDRGIKGECTPLMEA--ASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN  248 (739)
Q Consensus       171 ~v~~Ll~~~~~~~~~~~~~~~t~L~~A--~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~  248 (739)
                      ++++|++.|++++..+...|+||||+|  +..|+.+++++|+++|++++.++..|.||++.++..+.   .++|++.|++
T Consensus       102 ~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~~~~~~~~---~~~ll~~ga~  178 (229)
T 2vge_A          102 ICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALWDYSAEFG---DELSFREGES  178 (229)
T ss_dssp             HHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESSCBCCSST---TBCCBCTTCE
T ss_pred             HHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHHHHhhccc---cccCcccccc
Confidence            999999999999988776788999999  99999999999999999999999999999996655443   3677888988


Q ss_pred             --CCCCCCCCCcHHHHHHhcCChHHHHHHH-HcCCCC
Q psy903          249 --VEDHNENGHTPLMEAASAGHVGVAKILL-EYGAGI  282 (739)
Q Consensus       249 --~~~~~~~~~t~L~~A~~~~~~~ii~~Ll-~~~~~~  282 (739)
                        ++.+|..|.||||+|+..|+.++++.++ +..+.+
T Consensus       179 ~~~~~~d~~G~TpL~~A~~~g~~~~v~~~~l~~~p~~  215 (229)
T 2vge_A          179 VTVLRRDGPEETDWWWAALHGQEGYVPRNYFGLFPRV  215 (229)
T ss_dssp             EEEEESSCTTCSSEEEEEETTEEEEEEGGGEESSCCC
T ss_pred             ccccccCCCcccHHHHHHHcCCcceeehhhhhhCCCC
Confidence              6788999999999999999999987644 444443

>2rfm_A Putative ankyrin repeat protein TV1425; ANK repeat, protein binding; HET: BU2 GOL; 1.65A {Thermoplasma volcanium}

Probab=99.96  E-value=7e-28  Score=217.26  Aligned_cols=162  Identities=30%  Similarity=0.406  Sum_probs=120.7

Q ss_pred             CCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHH
Q psy903          117 ENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLME  196 (739)
Q Consensus       117 ~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~  196 (739)
                      ...+..+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+
T Consensus        29 n~~d~~g~t~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~  107 (192)
T 2rfm_A           29 NYRDSYNRTPLMVACMLGMENAIDKLVENFDKLEDKDIEGSTALIWAVKNNRLGIAEKLLSKGSNVNTKDFS-GKTPLMW  107 (192)
T ss_dssp             TCCCTTCCCHHHHHHHHTCGGGHHHHHHHHCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-SCCHHHH
T ss_pred             hCcCCCCCCHHHHHHHcCCHHHHHHHHHhccccccccccCccHHHHHHHcCCHHHHHHHHHCCCCCCCCCCC-CCcHHHH
Confidence            345566777777777777777777777777777777777777777777777777777777777776665543 4577777


Q ss_pred             HHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHH
Q psy903          197 AASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILL  276 (739)
Q Consensus       197 A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll  276 (739)
                      |+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+
T Consensus       108 A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll  187 (192)
T 2rfm_A          108 SIIFGYSEMSYFLLEHGANVNDRNLEGETPLIVASKYGRSEIVKKLLELGADISARDLTGLTAEASARIFGRQEVIKIFT  187 (192)
T ss_dssp             HHHHTCHHHHHHHHHTTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHH
T ss_pred             HHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHhCcHHHHHHHH
Confidence            77777777777777777777777777777777777777777777777777777777777777777777777777777777


Q ss_pred             HcC
Q psy903          277 EYG  279 (739)
Q Consensus       277 ~~~  279 (739)
                      +++
T Consensus       188 ~~~  190 (192)
T 2rfm_A          188 EVR  190 (192)
T ss_dssp             HHH
T ss_pred             hcc
Confidence            653

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.95  E-value=4.9e-28  Score=214.02  Aligned_cols=160  Identities=27%  Similarity=0.381  Sum_probs=116.0

Q ss_pred             chHHHHHHHcCCHHHHHHHHhcCCC-CCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903          124 ERSLVQACSDGDVKTVKKLLTEGRS-VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF  202 (739)
Q Consensus       124 ~~~l~~A~~~~~~~~~~~ll~~~~~-~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~  202 (739)
                      .++|+.|+..|+.+++++|++.+.+ ++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+
T Consensus         3 ~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~   81 (172)
T 3v30_A            3 SLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKE-RESALSLASTGGY   81 (172)
T ss_dssp             -CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTT-CCCHHHHHHHTTC
T ss_pred             hhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhccc-CCCHHHHHHHCCC
Confidence            4567777777777777777777665 6666777777777777777777777777777776665544 3577777777777


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCC
Q psy903          203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGI  282 (739)
Q Consensus       203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~  282 (739)
                      .+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..|+.+++++|++++++.
T Consensus        82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~~~~~  161 (172)
T 3v30_A           82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTEADSGYTPMDLAVALGYRKVQQVIENHILKL  161 (172)
T ss_dssp             HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHhCcHHHHHHHHHHHHHH
Confidence            77777777777777777777777777777777777777777777777777777777777777777777777777766554


Q ss_pred             cc
Q psy903          283 NT  284 (739)
Q Consensus       283 ~~  284 (739)
                      ..
T Consensus       162 ~~  163 (172)
T 3v30_A          162 FQ  163 (172)
T ss_dssp             SC
T ss_pred             hc
Confidence            43

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.95  E-value=1.1e-31  Score=264.19  Aligned_cols=257  Identities=16%  Similarity=0.112  Sum_probs=159.9

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCCC---CcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCcc--ccCCCCCCcHHHHHHH
Q psy903          125 RSLVQACSDGDVKTVKKLLTEGRSV---HETTDEGESLLSLACSAGYYELAQVLLAMHANVE--DRGIKGECTPLMEAAS  199 (739)
Q Consensus       125 ~~l~~A~~~~~~~~~~~ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~--~~~~~~~~t~L~~A~~  199 (739)
                      |+||.|+..|+.+++++|++.|...   +..+..|.||||+|+..|+.++|++|+++|+++.  ...... +||||+|+.
T Consensus        94 T~Lh~Aa~~G~~e~v~~Ll~~ga~~~~~~~~~~~~~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~  172 (376)
T 2aja_A           94 VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAE  172 (376)
T ss_dssp             HHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCcHHHHHHhccCCCCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHH
Confidence            5566666667888888888887722   2334567789999999999999999999986521  111111 589999999


Q ss_pred             cCcHHHHHHHHHCCCCCCC--CCCCCCcHHHHHH-hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHH
Q psy903          200 SGFIEIVRLLINHGADVNG--QSSSGNTPLMYAC-AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILL  276 (739)
Q Consensus       200 ~~~~~~~~~Ll~~g~~~~~--~~~~~~t~L~~A~-~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll  276 (739)
                      .|+.+++++|+++|++++.  .|..|.||||+|+ ..|+.+++++|++.|+       .|.|||++|+..|+.+++++|+
T Consensus       173 ~G~~eiv~~Ll~~ga~~~~~~~d~~g~TpL~~Aa~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~  245 (376)
T 2aja_A          173 NGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIA  245 (376)
T ss_dssp             TTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHH
T ss_pred             CCCHHHHHHHHHcCCccchhccCCCCCCHHHHHHHHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHH
Confidence            9999999999999888776  7778889999999 9999999999988764       2678999999999999999999


Q ss_pred             HcCCCCcccCcCccCCHHHHHHHcCCHHH------------HHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHH
Q psy903          277 EYGAGINTHSNEFKESALTLACYKGHLDM------------VRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD  344 (739)
Q Consensus       277 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~------------v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~  344 (739)
                      ++|++++.     ..++++.|+..|+.++            ++.|+.++                  ..+..+.+++|++
T Consensus       246 ~~ga~~~~-----~~~~l~~A~~~g~~~vv~~~~~~~~~~~~~~li~~~------------------~~~~~~~~~~Ll~  302 (376)
T 2aja_A          246 RHVNRLKE-----MHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRN------------------DEVLLDDIRFLLS  302 (376)
T ss_dssp             HHHHHHHH-----HHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHC------------------CGGGHHHHHHHHT
T ss_pred             hcCccccc-----ccHHHHHHHHCCChhhhcHHhhhhhHHHHHHHHHcc------------------hhhHHHHHHHHHh
Confidence            88776543     2245666666666553            33444433                  1123556677765


Q ss_pred             cCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHH
Q psy903          345 SGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQ  424 (739)
Q Consensus       345 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~  424 (739)
                      .+.....  ......           .....++++.|+..|+.+++++|++.|   ...+..+.|++..|-..|..++++
T Consensus       303 ~~~vk~l--~~~g~~-----------~n~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~~~~~~~~~~~~~~~  366 (376)
T 2aja_A          303 IPGIKAL--APTATI-----------PGDANELLRLALRLGNQGACALLLSIP---SVLALTKANNYYINETGGRLDLRA  366 (376)
T ss_dssp             STTTGGG--SSCCSS-----------TTCCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC-----------------
T ss_pred             Chhhhhh--hccCCC-----------CCCccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhccccccccccccHHH
Confidence            4321110  000000           012235688888888888888888764   446677889999999999988877


Q ss_pred             HHHH
Q psy903          425 VLLA  428 (739)
Q Consensus       425 ~Ll~  428 (739)
                      .-+.
T Consensus       367 ~~~~  370 (376)
T 2aja_A          367 VALE  370 (376)
T ss_dssp             ----
T ss_pred             HHHH
Confidence            6554

>3v30_A DNA-binding protein rfxank; structural genomics consortium, SGC, rfxank, ANK repeat, Pro binding; 1.57A {Homo sapiens} PDB: 3uxg_A

Probab=99.95  E-value=7.9e-28  Score=212.69  Aligned_cols=170  Identities=24%  Similarity=0.255  Sum_probs=145.9

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCc
Q psy903          156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH  235 (739)
Q Consensus       156 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~  235 (739)
                      +.||||.|+..|+.+++++|++.+.......+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   81 (172)
T 3v30_A            2 DSLSIHQLAAQGELDQLKEHLRKGDNLVNKPDERGFTPLIWASAFGEIETVRFLLEWGADPHILAKERESALSLASTGGY   81 (172)
T ss_dssp             --CCHHHHHHTTCHHHHHHHHTTCSGGGGCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             chhhHHHHHHcCCHHHHHHHHHcCcccccCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCchhhcccCCCHHHHHHHCCC
Confidence            35799999999999999999999987544545667799999999999999999999999999999999999999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy903          236 EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD  315 (739)
Q Consensus       236 ~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~  315 (739)
                      .+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +..|.|||++|+..++.+++++|++++++
T Consensus        82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~t~l~~A~~~~~~~~~~~L~~~~~~  160 (172)
T 3v30_A           82 TDIVGLLLERDVDINIYDWNGGTPLLYAVRGNHVKCVEALLARGADLTTE-ADSGYTPMDLAVALGYRKVQQVIENHILK  160 (172)
T ss_dssp             HHHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCCCCHHHHHHHhCcHHHHHHHHHHHHH
Confidence            99999999999999999999999999999999999999999999988774 45589999999999999999999999888


Q ss_pred             CCCCCCcCCcH
Q psy903          316 QEHKTDEMHTA  326 (739)
Q Consensus       316 ~~~~~~~~~~~  326 (739)
                      +...+..+.+|
T Consensus       161 ~~~~~~~~~~p  171 (172)
T 3v30_A          161 LFQSNLVPADP  171 (172)
T ss_dssp             HSCC-------
T ss_pred             HhcccCCCCCC
Confidence            77776666554

>1ihb_A P18-INK4C(INK6), cyclin-dependent kinase 6 inhibitor; cell cycle inhibitor, ankyrin repeat, CDK 4/6 inhibitor; 1.95A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bu9_A 1g3n_B 1mx4_A 1mx2_A 1mx6_A

Probab=99.95  E-value=1.4e-27  Score=208.91  Aligned_cols=159  Identities=28%  Similarity=0.297  Sum_probs=125.7

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG  234 (739)
Q Consensus       155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~  234 (739)
                      ...||||.|+..|+.+++++|++.|++++..+.. |.||||+|+. |+.+++++|+++|++++.++..|.||||+|+..|
T Consensus         4 ~~~~~L~~A~~~g~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   81 (162)
T 1ihb_A            4 PWGNELASAAARGDLEQLTSLLQNNVNVNAQNGF-GRTALQVMKL-GNPEIARRLLLRGANPDLKDRTGFAVIHDAARAG   81 (162)
T ss_dssp             -CHHHHHHHHHHTCHHHHHHHTTSCCCTTCCCTT-SCCHHHHCCS-SCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             hHhhHHHHHHHcCCHHHHHHHHhCCCCccccCcc-CccHHHHHHc-CcHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcC
Confidence            3457888888888888888888888877666544 4688888888 8888888888888888888888888888888888


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCC
Q psy903          235 HEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA  314 (739)
Q Consensus       235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~  314 (739)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++.....+..|.|||++|+..++.+++++|+++|+
T Consensus        82 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~GA  161 (162)
T 1ihb_A           82 FLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANGA  161 (162)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC-
T ss_pred             CHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHccCCCCCCcCCCCCcHHHHHHHcCCHHHHHHHHHhCC
Confidence            88888888888888888888888888888888888888888888877544455567788888888888888888888776


Q ss_pred             C
Q psy903          315 D  315 (739)
Q Consensus       315 ~  315 (739)
                      +
T Consensus       162 d  162 (162)
T 1ihb_A          162 G  162 (162)
T ss_dssp             -
T ss_pred             C
Confidence            4

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.95  E-value=3.4e-27  Score=203.70  Aligned_cols=150  Identities=32%  Similarity=0.441  Sum_probs=127.3

Q ss_pred             chHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcH
Q psy903          124 ERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFI  203 (739)
Q Consensus       124 ~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~  203 (739)
                      .++|+.|+..|+.+++++|++.|.+++ .+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.
T Consensus         3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~   80 (153)
T 1awc_B            3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKV-DRTPLHMAASEGHA   80 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTT-CCCHHHHHHHHTCH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHcCCCCC-cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHHcChH
Confidence            467888888888888888888888776 4777888888888888888888888888887766544 46888888888888


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHH
Q psy903          204 EIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL  275 (739)
Q Consensus       204 ~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~L  275 (739)
                      +++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.++..|.|||++|+..|+.+++++|
T Consensus        81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccCCCCCCHHHHHHHcCCHHHHHHh
Confidence            888888888888888888888888888888888888888888888888888888888888888888888876

>2aja_A Ankyrin repeat family protein; NESG, Q5ZSV0, structural genomics, PSI, protein structure initiative; 2.80A {Legionella pneumophila} SCOP: a.118.24.1

Probab=99.95  E-value=4.5e-31  Score=259.68  Aligned_cols=204  Identities=12%  Similarity=0.104  Sum_probs=107.3

Q ss_pred             chHHHHHHHcCCHHHHHHHHhcCCCC---CcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccc--cCCCCCCcHHHHHH
Q psy903          124 ERSLVQACSDGDVKTVKKLLTEGRSV---HETTDEGESLLSLACSAGYYELAQVLLAMHANVED--RGIKGECTPLMEAA  198 (739)
Q Consensus       124 ~~~l~~A~~~~~~~~~~~ll~~~~~~---~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~--~~~~~~~t~L~~A~  198 (739)
                      .+||+.|+..|+.+++++|++.|+++   +..+.+ .||||+|+..|+.++|++|+++|++++.  .+. .|.||||+|+
T Consensus       129 ~tpL~~Aa~~G~~eiv~~Ll~~gad~~~~~i~~~~-~TpLh~Aa~~G~~eiv~~Ll~~ga~~~~~~~d~-~g~TpL~~Aa  206 (376)
T 2aja_A          129 YQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAEN-YHAFRLAAENGHLHVLNRLCELAPTEATAMIQA-ENYYAFRWAA  206 (376)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHH-HHHHHHHHHTTCHHHHHHHHHSCGGGHHHHHHH-HHHHHHHHHH
T ss_pred             CCHHHHHHHcCCHHHHHHHHhCCCCccccccCCCC-CCHHHHHHHCCCHHHHHHHHHcCCccchhccCC-CCCCHHHHHH
Confidence            34566666666777777777777542   222222 6777777777777777777777766544  322 2357777777


Q ss_pred             -HcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC---------
Q psy903          199 -SSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH---------  268 (739)
Q Consensus       199 -~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~---------  268 (739)
                       ..|+.+++++|+++|+       .|.|||++|+..|+.+++++|+++|++++..+.    +++.|+..|+         
T Consensus       207 ~~~G~~eiv~~Ll~~ga-------~~~taL~~Aa~~g~~evv~lL~~~ga~~~~~~~----~l~~A~~~g~~~vv~~~~~  275 (376)
T 2aja_A          207 VGRGHHNVINFLLDCPV-------MLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHD----AFKLSNPDGVFDLVTKSEC  275 (376)
T ss_dssp             STTCCHHHHHHHTTSHH-------HHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHT----TTTTTSSSSCCCCSSHHHH
T ss_pred             HHCCCHHHHHHHHhCCC-------ccchHHHHHHHCCCHHHHHHHHhcCcccccccH----HHHHHHHCCChhhhcHHhh
Confidence             7777777777776553       256777777777777777777776655433221    2333333333         


Q ss_pred             ------------------hHHHHHHHHcCCCC----cccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcH
Q psy903          269 ------------------VGVAKILLEYGAGI----NTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTA  326 (739)
Q Consensus       269 ------------------~~ii~~Ll~~~~~~----~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~  326 (739)
                                        .+.+++|++.+...    .......+.++|++|+..|+.+++++|++.|   ...+..+.++
T Consensus       276 ~~~~~~~~~li~~~~~~~~~~~~~Ll~~~~vk~l~~~g~~~n~~~~~L~~A~~~g~~e~v~lLl~~~---~v~~~~~~~~  352 (376)
T 2aja_A          276 LQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP---SVLALTKANN  352 (376)
T ss_dssp             HHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTSH---HHHHSCC---
T ss_pred             hhhHHHHHHHHHcchhhHHHHHHHHHhChhhhhhhccCCCCCCccHHHHHHHHcCcHHHHHHHHcCh---HHHHHHHHhc
Confidence                              34455555422100    0011122456788888888888888887653   4445556677


Q ss_pred             HHHHHhCCchHHHHHHH
Q psy903          327 LMEASMDGHVEVAKLLL  343 (739)
Q Consensus       327 l~~a~~~~~~~~~~~L~  343 (739)
                      +++|-..|..++.+.-.
T Consensus       353 ~~~~~~~~~~~~~~~~~  369 (376)
T 2aja_A          353 YYINETGGRLDLRAVAL  369 (376)
T ss_dssp             -----------------
T ss_pred             cccccccccccHHHHHH
Confidence            77777777777665543

>2y1l_E Darpin-8.4; hydrolase-inhibitor complex, DEVD darpin, ankyrin repeat Pro ribosome display, apoptosis; 1.80A {Synthetic source} PDB: 3noc_D* 4dx5_D* 2j8s_D* 4dx6_D* 4dx7_D* 3nog_D* 1mj0_A 1svx_A 2qyj_A 2bkg_A 2p2c_P 2bkk_B* 2v5q_C 2xee_A 2xeh_A 3q9n_C* 3q9u_C*

Probab=99.95  E-value=4.6e-27  Score=206.68  Aligned_cols=153  Identities=38%  Similarity=0.535  Sum_probs=82.0

Q ss_pred             cHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHH
Q psy903          192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGV  271 (739)
Q Consensus       192 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~i  271 (739)
                      ++|+.|+..|+.+++++|+++|++++.++..|.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+.++
T Consensus        16 ~~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~   95 (169)
T 2y1l_E           16 KKLLEAARAGRDDEVRILMANGADVNAEDASGWTPLHLAAFNGHLEIVEVLLKNGADVNAVDHAGMTPLRLAALFGHLEI   95 (169)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHH
T ss_pred             chHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHH
Confidence            55555555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             HHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHc
Q psy903          272 AKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS  345 (739)
Q Consensus       272 i~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~  345 (739)
                      +++|+++|++++.. +..|.||||+|+..++.+++++|+++|++++..+..|.||+++|+..++.+++++|++.
T Consensus        96 ~~~Ll~~g~~~~~~-~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~L~~~  168 (169)
T 2y1l_E           96 VEVLLKNGADVNAN-DMEGHTPLHLAAMFGHLEIVEVLLKNGADVNAQDKFGKTAFDISIDNGNEDLAEILQKL  168 (169)
T ss_dssp             HHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTC
T ss_pred             HHHHHHcCCCCCCC-CCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHhCCHHHHHHHHHc
Confidence            55555555554432 22355555555555555555555555555555555555555555555555555555543

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.95  E-value=4.3e-27  Score=209.21  Aligned_cols=164  Identities=28%  Similarity=0.404  Sum_probs=134.0

Q ss_pred             CCCchHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHH
Q psy903          121 PQNERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS  199 (739)
Q Consensus       121 ~~~~~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~  199 (739)
                      +...++|+.|+..|+.+++++|++. +.+++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+.
T Consensus         3 ~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~   81 (179)
T 3f6q_A            3 PEFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRG-DDTPLHLAAS   81 (179)
T ss_dssp             ----CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHH
T ss_pred             HHHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHH
Confidence            3456778888888888888888887 5678888888888888888888888888888888888776544 4588888888


Q ss_pred             cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcC
Q psy903          200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG  279 (739)
Q Consensus       200 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~  279 (739)
                      .|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..|..|.|||++|+..++.+++++|+++|
T Consensus        82 ~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~~~~L~~~g  161 (179)
T 3f6q_A           82 HGHRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSICNKYGEMPVDKAKAPLRELLRERAEKMG  161 (179)
T ss_dssp             TTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBCCTTSCCGGGGSCHHHHHHHHHHHHHTT
T ss_pred             cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchhccCCCCcHHHHHHHHHHHHHHHHHHhh
Confidence            88888888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             CCCccc
Q psy903          280 AGINTH  285 (739)
Q Consensus       280 ~~~~~~  285 (739)
                      .+++..
T Consensus       162 ~~~~~~  167 (179)
T 3f6q_A          162 QNLNRI  167 (179)
T ss_dssp             CCCSCB
T ss_pred             cCcccC
Confidence            877654

>3v31_A Ankyrin repeat family A protein 2; structural genomics consortium, SGC, ankra2, ANK repeat, Pro binding, HDAC4; 1.57A {Homo sapiens} PDB: 3v2x_A 3v2o_A 3so8_A

Probab=99.95  E-value=1.1e-26  Score=204.29  Aligned_cols=155  Identities=27%  Similarity=0.390  Sum_probs=78.1

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCc
Q psy903          156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH  235 (739)
Q Consensus       156 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~  235 (739)
                      |.||||.|+..|+.+++++|++.+.+++..+.. |.||||+|+..|+.+++++|+++|++++..+..|.||||+|+..|+
T Consensus         3 ~~t~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   81 (167)
T 3v31_A            3 NSLSVHQLAAQGEMLYLATRIEQENVINHTDEE-GFTPLMWAAAHGQIAVVEFLLQNGADPQLLGKGRESALSLACSKGY   81 (167)
T ss_dssp             TCCCHHHHHHTTCHHHHHHHHHHSSCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTC
T ss_pred             CcchHHHHHHCCCHHHHHHHHHcCCCcCCCCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCC
Confidence            445555555555555555555555444433332 2355555555555555555555555555555555555555555555


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHc
Q psy903          236 EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA  312 (739)
Q Consensus       236 ~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~  312 (739)
                      .+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+..|+.+++++|+++
T Consensus        82 ~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~-~~~g~t~l~~A~~~~~~~~~~~L~~~  157 (167)
T 3v31_A           82 TDIVKMLLDCGVDVNEYDWNGGTPLLYAVHGNHVKCVKMLLESGADPTIE-TDSGYNSMDLAVALGYRSVQQVIESH  157 (167)
T ss_dssp             HHHHHHHHHHTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHHTCHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCc-CCCCCCHHHHHHHcCcHHHHHHHHHH
Confidence            55555555555555555555555555555555555555555555444432 22344555555555555555555444

>1awc_B Protein (GA binding protein beta 1); complex (transcription regulation/DNA), DNA-binding, nuclear protein, ETS domain, ankyrin repeats; HET: DNA BRU CBR; 2.15A {Mus musculus} SCOP: d.211.1.1

Probab=99.95  E-value=1.5e-26  Score=199.67  Aligned_cols=150  Identities=28%  Similarity=0.393  Sum_probs=118.4

Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcH
Q psy903          157 ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE  236 (739)
Q Consensus       157 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~  236 (739)
                      .++|+.|+..|+.+++++|++.|++++  .+..|.||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|+.
T Consensus         3 ~~~L~~A~~~g~~~~v~~Ll~~g~~~~--~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~   80 (153)
T 1awc_B            3 GKKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHA   80 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCH
T ss_pred             cHHHHHHHHcCCHHHHHHHHHcCCCCC--cCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHHcChH
Confidence            467888888888888888888887664  234456888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHH
Q psy903          237 AVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL  309 (739)
Q Consensus       237 ~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L  309 (739)
                      +++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+..|+.+++++|
T Consensus        81 ~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~t~l~~A~~~~~~~i~~~L  152 (153)
T 1awc_B           81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQ-SKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             HHHHHHHHcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccc-CCCCCCHHHHHHHcCCHHHHHHh
Confidence            8888888888888888888888888888888888888888887777654 34577888888888888777776

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.95  E-value=5.5e-27  Score=205.64  Aligned_cols=159  Identities=31%  Similarity=0.424  Sum_probs=126.2

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHH
Q psy903          120 RPQNERSLVQACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA  198 (739)
Q Consensus       120 ~~~~~~~l~~A~~~~~~~~~~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~  198 (739)
                      ...+.++|+.|+..|+.+++++|++ .+.+++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+
T Consensus         5 ~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~   83 (165)
T 3twr_A            5 NSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKG-GLVPLHNAC   83 (165)
T ss_dssp             -CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHH
T ss_pred             cchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCC-CCCHHHHHH
Confidence            3455778888888888888888887 45567777777888888888888888888888888887766654 458888888


Q ss_pred             HcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          199 SSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       199 ~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                      ..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+. ++.+++++|+++
T Consensus        84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~a~~-~~~~i~~~L~~~  162 (165)
T 3twr_A           84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKKNRDGNTPLDLVKD-GDTDIQDLLRGD  162 (165)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCTGGGSCT-TCHHHHHHHHTC
T ss_pred             HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCChhHhHhc-CChHHHHHHhhc
Confidence            8888888888888888888888888888888888888888888888888888888888888888665 778888888877


Q ss_pred             CC
Q psy903          279 GA  280 (739)
Q Consensus       279 ~~  280 (739)
                      |+
T Consensus       163 gA  164 (165)
T 3twr_A          163 AA  164 (165)
T ss_dssp             --
T ss_pred             cc
Confidence            64

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.94  E-value=2.2e-26  Score=199.78  Aligned_cols=153  Identities=29%  Similarity=0.415  Sum_probs=137.8

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903          123 NERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG  201 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~  201 (739)
                      +.++|+.|+..|+.+++++|++. +.+++..+..|.||||+ +..|+.+++++|++.|++++..+.. |.||||+|+..|
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~-~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~   79 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQV-MMFGSTAIALELLKQGASPNVQDTS-GTSPVHDAARTG   79 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHH-SCTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTT
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCCcHHHH-HHcCCHHHHHHHHHCCCCCCCcCCC-CCCHHHHHHHcC
Confidence            45789999999999999999988 44888899999999999 8899999999999999998877654 569999999999


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++ ++++..|..|.|||++|+..|+.+++++|+++
T Consensus        80 ~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A           80 FLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             CHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             cHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            99999999999999999999999999999999999999999998 89999999999999999999999999999874

>3f6q_A Integrin-linked protein kinase; ILK, integrin-linked kinase, pinch, ankyrin repeat, ANK, IPP; 1.60A {Homo sapiens} PDB: 3ixe_A 2kbx_A

Probab=99.94  E-value=1.2e-26  Score=206.23  Aligned_cols=167  Identities=25%  Similarity=0.270  Sum_probs=131.7

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG  234 (739)
Q Consensus       155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~  234 (739)
                      ++.++|+.|+..|+.+++++|++.+.......+..|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+..|
T Consensus         4 ~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~   83 (179)
T 3f6q_A            4 EFMDDIFTQCREGNAVAVRLWLDNTENDLNQGDDHGFSPLHWACREGRSAVVEMLIMRGARINVMNRGDDTPLHLAASHG   83 (179)
T ss_dssp             ---CCHHHHHHHTCHHHHHHHHHCTTSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTT
T ss_pred             HHHHHHHHHHHcCCHHHHHHHHhcCcccccccCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            45678888888888888888888754433333445568888888888888888888888888888888888888888888


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCC
Q psy903          235 HEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA  314 (739)
Q Consensus       235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~  314 (739)
                      +.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+..++.+++++|++.|+
T Consensus        84 ~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~tpl~~A~~~~~~~~~~~L~~~g~  162 (179)
T 3f6q_A           84 HRDIVQKLLQYKADINAVNEHGNVPLHYACFWGQDQVAEDLVANGALVSIC-NKYGEMPVDKAKAPLRELLRERAEKMGQ  162 (179)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSSBC-CTTSCCGGGGSCHHHHHHHHHHHHHTTC
T ss_pred             CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCcchh-ccCCCCcHHHHHHHHHHHHHHHHHHhhc
Confidence            888888888888888888888888888888888888888888888887764 4458888888888888888888888888


Q ss_pred             CCCCCCCc
Q psy903          315 DQEHKTDE  322 (739)
Q Consensus       315 ~~~~~~~~  322 (739)
                      +++..+..
T Consensus       163 ~~~~~~~~  170 (179)
T 3f6q_A          163 NLNRIPYK  170 (179)
T ss_dssp             CCSCBCCC
T ss_pred             CcccCCcc
Confidence            87765544

>3twr_A Tankyrase-2; ankyrin repeat, protein-protein interaction, substrate recru poly(ADP-ribosyl)ation; HET: PE8; 1.55A {Homo sapiens} SCOP: d.211.1.0 PDB: 3tws_A* 3twt_A* 3twv_A* 3tww_A 3twx_A 3twq_A 3twu_A 2y0i_S*

Probab=99.94  E-value=1.1e-26  Score=203.77  Aligned_cols=161  Identities=31%  Similarity=0.375  Sum_probs=128.9

Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903          152 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYAC  231 (739)
Q Consensus       152 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~  231 (739)
                      .+..|.|+|+.|+..|+.+++++|++.+..........|+||||+|+..|+.+++++|+++|++++.++..|.||||+|+
T Consensus         4 ~~~~~~~~l~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~   83 (165)
T 3twr_A            4 GNSEADRQLLEAAKAGDVETVKKLCTVQSVNCRDIEGRQSTPLHFAAGYNRVSVVEYLLQHGADVHAKDKGGLVPLHNAC   83 (165)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHCCTTTTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHH
T ss_pred             CcchhhHHHHHHHHhCCHHHHHHHHHcCCCCccccccCCCCHHHHHHHcChHHHHHHHHhcCCCCCccCCCCCCHHHHHH
Confidence            35667788999999999999988888654333333444568888888888888888888888888888888888888888


Q ss_pred             hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903          232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS  311 (739)
Q Consensus       232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  311 (739)
                      ..|+.+++++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++.. +..|.||+++|+. ++.+++++|++
T Consensus        84 ~~~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~-~~~g~t~l~~a~~-~~~~i~~~L~~  161 (165)
T 3twr_A           84 SYGHYEVAELLVKHGAVVNVADLWKFTPLHEAAAKGKYEICKLLLQHGADPTKK-NRDGNTPLDLVKD-GDTDIQDLLRG  161 (165)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCTGGGSCT-TCHHHHHHHHT
T ss_pred             HcCcHHHHHHHHhCCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCccc-CCCCCChhHhHhc-CChHHHHHHhh
Confidence            888888888888888888888888888888888888888888888888887764 4458888888766 78888888887


Q ss_pred             cCC
Q psy903          312 AGA  314 (739)
Q Consensus       312 ~~~  314 (739)
                      +|+
T Consensus       162 ~gA  164 (165)
T 3twr_A          162 DAA  164 (165)
T ss_dssp             C--
T ss_pred             ccc
Confidence            764

>2vge_A RELA-associated inhibitor; iaspp, nucleus, apoptosis, repressor, cytoplasm, phosphorylation, P53 binding protein, ANK repeat, SH3 domain; 2.10A {Homo sapiens}

Probab=99.94  E-value=1e-29  Score=234.36  Aligned_cols=156  Identities=23%  Similarity=0.261  Sum_probs=90.3

Q ss_pred             HHHHhCCCCccccC--CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCC
Q psy903          173 QVLLAMHANVEDRG--IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE  250 (739)
Q Consensus       173 ~~Ll~~~~~~~~~~--~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~  250 (739)
                      +.|++.|++++..+  ...+.||||.|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++
T Consensus         2 ~~ll~~~~~~~~~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~n   81 (229)
T 2vge_A            2 RSVLRKAGSPRKARRARLNPLVLLLDAALTGELEVVQQAVKEMNDPSQPNEEGITALHNAICGANYSIVDFLITAGANVN   81 (229)
T ss_dssp             --------CCCCCCCTTSCHHHHHHHHHHHTCHHHHHHHHHHSSCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTT
T ss_pred             eehhccCCCCccccccccchhHHHHHHHHcCCHHHHHHHHhcCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCC
Confidence            34455554443322  2223455666666666666666666666666666666666666666666666666666666666


Q ss_pred             CCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHH--HHcCCHHHHHHHHHcCCCCCCCCCcCCcHHH
Q psy903          251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLA--CYKGHLDMVRFLLSAGADQEHKTDEMHTALM  328 (739)
Q Consensus       251 ~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A--~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~  328 (739)
                      ..|..|.||||+|+..|+.+++++|+++|++++...+..|.|||++|  +..++.+++++|++.|++++..+..+.++++
T Consensus        82 ~~d~~g~tpLh~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~a~~~~~~~~v~~Ll~~ga~~~~~~~~~~~~l~  161 (229)
T 2vge_A           82 SPDSHGWTPLHCAASCNDTVICMALVQHGAAIFATTLSDGATAFEKCDPYREGYADCATYLADVEQSMGLMNSGAVYALW  161 (229)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCCSSTTCCTGGGCCTTSTTHHHHHHHHHHHHHHTTTSGGGEEEESS
T ss_pred             CCCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHHhcChHHHHHHHHHcCCCcccccCCchHHHH
Confidence            66666666666666666666666666666666555444566666666  6666666666666666666666655555554

>1bd8_A P19INK4D CDK4/6 inhibitor; tumor suppressor, ankyrin motif; 1.80A {Homo sapiens} SCOP: d.211.1.1 PDB: 1bi8_B 1ap7_A 1blx_B

Probab=99.94  E-value=9.1e-26  Score=195.84  Aligned_cols=153  Identities=24%  Similarity=0.274  Sum_probs=117.7

Q ss_pred             CCcHHHHHHhcCcHHHHHHHHHc-cccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHH
Q psy903           31 GESLLSLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAA  109 (739)
Q Consensus        31 g~t~L~~A~~~~~~~iv~~Ll~~-ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (739)
                      |.||||.|+..|+.+++++|++. +.+++..+..+. ||||+ +..                                  
T Consensus         2 ~~~~L~~A~~~g~~~~v~~ll~~~~~~~~~~~~~g~-t~L~~-~~~----------------------------------   45 (156)
T 1bd8_A            2 AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGK-TALQV-MMF----------------------------------   45 (156)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSC-CHHHH-SCT----------------------------------
T ss_pred             cchHHHHHHHhCCHHHHHHHHHhhCcCccccCCCCC-cHHHH-HHc----------------------------------
Confidence            45778888888888888888877 336666665554 66666 443                                  


Q ss_pred             HHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCC
Q psy903          110 ALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG  189 (739)
Q Consensus       110 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~  189 (739)
                                              |+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+.. 
T Consensus        46 ------------------------~~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-  100 (156)
T 1bd8_A           46 ------------------------GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGT-  100 (156)
T ss_dssp             ------------------------TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT-
T ss_pred             ------------------------CCHHHHHHHHHCCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-
Confidence                                    3577777888888888888888888888888888888888888888877766654 


Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHC
Q psy903          190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC  245 (739)
Q Consensus       190 ~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~  245 (739)
                      |.||||+|+..|+.+++++|+++ ++++.+|..|.||||+|+..|+.+++++|+++
T Consensus       101 g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~g~t~l~~A~~~~~~~~v~~Ll~~  155 (156)
T 1bd8_A          101 GALPIHLAVQEGHTAVVSFLAAE-SDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             SCCHHHHHHHHTCHHHHHHHHTT-SCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             CCcHHHHHHHhChHHHHHHHHhc-cCCCCcCCCCCCHHHHHHHcCcHHHHHHHHhh
Confidence            45888888888888888888888 88888888888888888888888888888764

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.93  E-value=6.5e-27  Score=218.47  Aligned_cols=163  Identities=23%  Similarity=0.273  Sum_probs=87.8

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG  234 (739)
Q Consensus       155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~  234 (739)
                      .|.||||.|+..++.++++.|+++|++++..  ..+.||||.|+..|+.+++++|++.|++++.+|..|.||||+|+..|
T Consensus         4 ~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~--~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~~~g   81 (239)
T 1ycs_B            4 TGQVSLPPGKRTNLRKTGSERIAHGMRVKFN--PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAG   81 (239)
T ss_dssp             -----------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHT
T ss_pred             cccccCchhhhhhhHHHHHHHhccCCCcccC--chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcC
Confidence            4566666666666666666666666666543  23356777777777777777777666666666666777777777777


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHH--HHcCCHHHHHHHHHc
Q psy903          235 HEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLA--CYKGHLDMVRFLLSA  312 (739)
Q Consensus       235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A--~~~~~~~~v~~Ll~~  312 (739)
                      +.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++......+.||+++|  +..|+.+++++|++.
T Consensus        82 ~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll~~  161 (239)
T 1ycs_B           82 HTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYGV  161 (239)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHHH
T ss_pred             CHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHHHh
Confidence            777777777777777666666777777777777777777777777666655444344677766  566667777777776


Q ss_pred             CCCCCCC
Q psy903          313 GADQEHK  319 (739)
Q Consensus       313 ~~~~~~~  319 (739)
                      |++++..
T Consensus       162 ~a~~~~~  168 (239)
T 1ycs_B          162 QEKMGIM  168 (239)
T ss_dssp             HHHTTTT
T ss_pred             hhccccc
Confidence            6665544

>1ycs_B 53BP2, P53BP2; ankyrin repeats, SH3, tumor suppressor, multigene family, nuclear protein, phosphorylation, disease mutation, polymorphism; 2.20A {Homo sapiens} SCOP: b.34.2.1 d.211.1.1 PDB: 4a63_B

Probab=99.93  E-value=1.5e-26  Score=215.97  Aligned_cols=181  Identities=22%  Similarity=0.210  Sum_probs=129.4

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHH
Q psy903          120 RPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS  199 (739)
Q Consensus       120 ~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~  199 (739)
                      ...+.|+|+.|+..|+.+.++.|++.|++++.. ..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+.
T Consensus         2 ~~~g~t~L~~a~~~~~~~~~~~ll~~g~~~~~~-~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~d~~-g~t~L~~A~~   79 (239)
T 1ycs_B            2 EITGQVSLPPGKRTNLRKTGSERIAHGMRVKFN-PLPLALLLDSSLEGEFDLVQRIIYEVDDPSLPNDE-GITALHNAVC   79 (239)
T ss_dssp             ------------------------------------CHHHHHHHHHHTCHHHHHHHTSTTSSCCCCCTT-SCCHHHHHHH
T ss_pred             CccccccCchhhhhhhHHHHHHHhccCCCcccC-chhhHHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHH
Confidence            345789999999999999999999999999864 67899999999999999999999999998877655 5799999999


Q ss_pred             cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCC-cHHHHH--HhcCChHHHHHHH
Q psy903          200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGH-TPLMEA--ASAGHVGVAKILL  276 (739)
Q Consensus       200 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~-t~L~~A--~~~~~~~ii~~Ll  276 (739)
                      .|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|. ||||+|  +..|+.+++++|+
T Consensus        80 ~g~~~~v~~Ll~~ga~~~~~d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~g~~~~~~~Ll  159 (239)
T 1ycs_B           80 AGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY  159 (239)
T ss_dssp             HTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHH
T ss_pred             cCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCcceecCCCCcchHHHHHHhhhccHHHHHHHH
Confidence            9999999999999999999999999999999999999999999999999999998887 999999  7889999999999


Q ss_pred             HcCCCCcccC--------cCccCCHHHHHHHcCC
Q psy903          277 EYGAGINTHS--------NEFKESALTLACYKGH  302 (739)
Q Consensus       277 ~~~~~~~~~~--------~~~~~~~l~~A~~~~~  302 (739)
                      ++|++++...        +..+.+++++++..|.
T Consensus       160 ~~~a~~~~~~~~~~~al~d~~~~~~~eLa~~~G~  193 (239)
T 1ycs_B          160 GVQEKMGIMNKGVIYALWDYEPQNDDELPMKEGD  193 (239)
T ss_dssp             HHHHHTTTTGGGEEEESSCBCCSSTTBCCBCSSC
T ss_pred             HhhhcccccccceEEEEeccCCCCCCcccccCCC
Confidence            9988765432        2234556665555554

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.92  E-value=3.5e-25  Score=186.37  Aligned_cols=134  Identities=22%  Similarity=0.268  Sum_probs=119.1

Q ss_pred             CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCC-CC
Q psy903          146 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSS-GN  224 (739)
Q Consensus       146 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-~~  224 (739)
                      +++++..+..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+. ++.+++++|+++|++++.++.. |.
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~-~~~~~v~~Ll~~g~~~~~~~~~~g~   79 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRF-GRRPIQVMMM-GSAQVAELLLLHGAEPNCADPATLT   79 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-CCTTTTTSTT-SCHHHHHHHHHHTCCSSCCBTTTTB
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCC-CCCHHHHHHc-CCHHHHHHHHHCCCCCCCcCCCCCC
Confidence            4678888899999999999999999999999999888776644 5699999999 9999999999999999999988 89


Q ss_pred             cHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903          225 TPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG  281 (739)
Q Consensus       225 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~  281 (739)
                      ||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|++
T Consensus        80 t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A           80 RPVHDAAREGFLDTLVVLHRAGARLDVCDAWGRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTCCCCCCCSSSSSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            999999999999999999999999999999999999999999999999999988764

>1d9s_A Cyclin-dependent kinase 4 inhibitor B; helix-turn-helix, ankyrin repeat, signaling protein; NMR {Mus musculus} SCOP: i.11.1.1

Probab=99.92  E-value=1.3e-24  Score=183.01  Aligned_cols=134  Identities=19%  Similarity=0.191  Sum_probs=106.4

Q ss_pred             CCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhh
Q psy903           21 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSV  100 (739)
Q Consensus        21 g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~  100 (739)
                      +++++..+..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+. |                        
T Consensus         2 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~~-~------------------------   55 (136)
T 1d9s_A            2 SPGIHMLGGSSDAGLATAAARGQVETVRQLLEAGADPNALNRFGR-RPIQVMMM-G------------------------   55 (136)
T ss_dssp             CCCCSCCCCCCSCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC-TTTTTSTT-S------------------------
T ss_pred             CCCccCCCCCCccHHHHHHHcCCHHHHHHHHHcCCCcCCcCCCCC-CHHHHHHc-C------------------------
Confidence            578889999999999999999999999999999999988876665 88888776 5                        


Q ss_pred             hchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCC-CCcHHHHHHHcCcHHHHHHHHhCC
Q psy903          101 SCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMH  179 (739)
Q Consensus       101 ~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~  179 (739)
                                                        +.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|
T Consensus        56 ----------------------------------~~~~v~~Ll~~g~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g  101 (136)
T 1d9s_A           56 ----------------------------------SAQVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAG  101 (136)
T ss_dssp             ----------------------------------CHHHHHHHHHHTCCSSCCBTTTTBCHHHHHHHHTCHHHHHHHHHTC
T ss_pred             ----------------------------------CHHHHHHHHHCCCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcC
Confidence                                              577888888888888888887 777888777777777777777777


Q ss_pred             CCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCC
Q psy903          180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGAD  215 (739)
Q Consensus       180 ~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~  215 (739)
                      ++++..+.. |.||||+|+..++.+++++|+++|+|
T Consensus       102 a~~~~~d~~-g~tpl~~A~~~~~~~~~~~Ll~~Gad  136 (136)
T 1d9s_A          102 ARLDVCDAW-GRLPVDLAEEQGHRDIARYLHAATGD  136 (136)
T ss_dssp             CCCCCCSSS-SSCHHHHHHHHTCHHHHHHHHHHHCC
T ss_pred             CCCCccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            776655543 45777777777777777777766653

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.92  E-value=2.2e-25  Score=197.04  Aligned_cols=154  Identities=14%  Similarity=0.151  Sum_probs=133.5

Q ss_pred             chHHHHHHHcCCHHHHHHHHhcCCCCCcCC-CCCCcHHHHHHHcCcH----HHHHHHHhCCCCccccCCCCCCcHHHHHH
Q psy903          124 ERSLVQACSDGDVKTVKKLLTEGRSVHETT-DEGESLLSLACSAGYY----ELAQVLLAMHANVEDRGIKGECTPLMEAA  198 (739)
Q Consensus       124 ~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~-~~g~t~L~~A~~~~~~----~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~  198 (739)
                      .++|+.|++.|+.+.++.+++.+.  +..+ ..|.||||+|+..|+.    +++++|++.|++++..+ ..|+||||+|+
T Consensus         7 ~~~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d-~~g~TpLh~a~   83 (186)
T 3t8k_A            7 YRTVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRT-KEGTTLFFPLF   83 (186)
T ss_dssp             CSSHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCC-TTCCCTHHHHH
T ss_pred             ccHHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCC-CCCCcHHHHHH
Confidence            467999999999999999998764  4455 6799999999999864    58999999999998887 44579999999


Q ss_pred             HcCc------HHHHHHHHHCCCCCCCCCCCCC-cHHHHHHhcC-----cHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHh
Q psy903          199 SSGF------IEIVRLLINHGADVNGQSSSGN-TPLMYACAGG-----HEAVVRVLLE-CGANVEDHNENGHTPLMEAAS  265 (739)
Q Consensus       199 ~~~~------~~~~~~Ll~~g~~~~~~~~~~~-t~L~~A~~~~-----~~~~v~~Ll~-~~~~~~~~~~~~~t~L~~A~~  265 (739)
                      ..++      .+++++|+++|++++.+|..|. ||||+|+..+     +.+++++|++ +|++++.+|..|.||||+|++
T Consensus        84 ~~~~~~~~~~~~iv~~Ll~~Gadin~~d~~g~ttpLh~A~~~~~~~~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~  163 (186)
T 3t8k_A           84 QGGGNDITGTTELCKIFLEKGADITALYKPYKIVVFKNIFNYFVDENEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKR  163 (186)
T ss_dssp             HHCTTCHHHHHHHHHHHHHTTCCSSSCBGGGTBCTTGGGGGCCSCHHHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHT
T ss_pred             HcCCcchhhHHHHHHHHHHCCCCCCccCCCcCchHHHHHHHcCCChhhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHH
Confidence            9886      6789999999999999999999 9999999844     4579999999 999999999999999999999


Q ss_pred             cCChHHHHHHHHcCC
Q psy903          266 AGHVGVAKILLEYGA  280 (739)
Q Consensus       266 ~~~~~ii~~Ll~~~~  280 (739)
                      .|+.+++++|.++..
T Consensus       164 ~~~~~~v~~L~~~~~  178 (186)
T 3t8k_A          164 CQKPIALKMMEDYIK  178 (186)
T ss_dssp             TTCHHHHHHHHHHHH
T ss_pred             cCCHHHHHHHHHHHH
Confidence            999999999987644

>3t8k_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center F or structural genomics, MCSG; 1.77A {Leptotrichia buccalis}

Probab=99.92  E-value=2.6e-25  Score=196.53  Aligned_cols=162  Identities=14%  Similarity=0.165  Sum_probs=124.1

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccC-CCCCcHHHHHHhcCcH----HHHHHHHHccccccccCCCCCcchhHHHhhc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETT-DEGESLLSLACSAGYY----ELAQVLLAMHANVEDRGIKGECTPLMEAASS   75 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~-~~g~t~L~~A~~~~~~----~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~   75 (739)
                      +|+.|++.|+++.++.++..+.  +..+ ..|+||||+|+..|+.    +++++|+++|++++..+..|. ||||+|+..
T Consensus         9 ~l~~Aa~~g~~~~~~~l~~~~~--~~~~~~~g~T~Lh~A~~~~~~~~~~~iv~~Ll~~Gadvn~~d~~g~-TpLh~a~~~   85 (186)
T 3t8k_A            9 TVSAAAMLGTYEDFLELFEKGY--EDKESVLKSNILYDVLRNNNDEARYKISMFLINKGADIKSRTKEGT-TLFFPLFQG   85 (186)
T ss_dssp             SHHHHHHHSCHHHHHHHHHHSS--SCHHHHHTTTHHHHHTTCSCHHHHHHHHHHHHHTTCCSSCCCTTCC-CTHHHHHHH
T ss_pred             HHHHHHHcCCHHHHHHHHhcCc--ccccccCCCCHHHHHHHcCCcchHHHHHHHHHHCCCCCCCCCCCCC-cHHHHHHHc
Confidence            5899999999999999999764  4455 7799999999999964    599999999999999997776 999999987


Q ss_pred             cccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCC
Q psy903           76 GFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDE  155 (739)
Q Consensus        76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~  155 (739)
                      |..++                                                    .+..+++++|++.|++++.+|..
T Consensus        86 ~~~~~----------------------------------------------------~~~~~iv~~Ll~~Gadin~~d~~  113 (186)
T 3t8k_A           86 GGNDI----------------------------------------------------TGTTELCKIFLEKGADITALYKP  113 (186)
T ss_dssp             CTTCH----------------------------------------------------HHHHHHHHHHHHTTCCSSSCBGG
T ss_pred             CCcch----------------------------------------------------hhHHHHHHHHHHCCCCCCccCCC
Confidence            72111                                                    01257899999999999999999


Q ss_pred             CC-cHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHH-CCCCCCCCCCCCCcHHHHHHhc
Q psy903          156 GE-SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLIN-HGADVNGQSSSGNTPLMYACAG  233 (739)
Q Consensus       156 g~-t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~-~g~~~~~~~~~~~t~L~~A~~~  233 (739)
                      |. ||||+|+..+..+                             .+..+++++|++ +|++++.+|..|.||||+|+..
T Consensus       114 g~ttpLh~A~~~~~~~-----------------------------~~~~~iv~~Ll~~~gad~~~~d~~G~TpL~~A~~~  164 (186)
T 3t8k_A          114 YKIVVFKNIFNYFVDE-----------------------------NEMIPLYKLIFSQSGLQLLIKDKWGLTALEFVKRC  164 (186)
T ss_dssp             GTBCTTGGGGGCCSCH-----------------------------HHHHHHHHHHHTSTTCCTTCCCTTSCCHHHHHHTT
T ss_pred             cCchHHHHHHHcCCCh-----------------------------hhHHHHHHHHHHhcCCCCcccCCCCCCHHHHHHHc
Confidence            99 9999988744311                             123456666666 6666666666666777777666


Q ss_pred             CcHHHHHHHHHCC
Q psy903          234 GHEAVVRVLLECG  246 (739)
Q Consensus       234 ~~~~~v~~Ll~~~  246 (739)
                      |+.+++++|.++.
T Consensus       165 ~~~~~v~~L~~~~  177 (186)
T 3t8k_A          165 QKPIALKMMEDYI  177 (186)
T ss_dssp             TCHHHHHHHHHHH
T ss_pred             CCHHHHHHHHHHH
Confidence            6666666666544

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.91  E-value=1.5e-24  Score=187.44  Aligned_cols=144  Identities=18%  Similarity=0.197  Sum_probs=99.1

Q ss_pred             CcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhch
Q psy903           24 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCA  103 (739)
Q Consensus        24 ~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  103 (739)
                      .+..+..|.||||+|+..|+.++|++|+++|++++..+..+. ||||+|+ .|                           
T Consensus         5 ~~~~~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~-t~L~~A~-~~---------------------------   55 (156)
T 1bi7_B            5 AGSSMEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGR-RPIQVMM-MG---------------------------   55 (156)
T ss_dssp             -----CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSC-CTTTSSC-TT---------------------------
T ss_pred             ccCCCccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCC-CHHHHHH-cC---------------------------
Confidence            345677899999999999999999999999999988887665 8888874 33                           


Q ss_pred             HHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCc-HHHHHHHcCcHHHHHHHHhCCCCc
Q psy903          104 LDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGES-LLSLACSAGYYELAQVLLAMHANV  182 (739)
Q Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t-~L~~A~~~~~~~~v~~Ll~~~~~~  182 (739)
                                                     +.+++++|++.|++++..+..|.| |||+|+..|+.+++++|+++|+++
T Consensus        56 -------------------------------~~~~v~~Ll~~g~~~~~~d~~g~ttpL~~A~~~~~~~~v~~Ll~~ga~~  104 (156)
T 1bi7_B           56 -------------------------------SARVAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARL  104 (156)
T ss_dssp             -------------------------------CHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHHHTCCS
T ss_pred             -------------------------------CHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHHCCCHHHHHHHHHcCCCC
Confidence                                           578888899888888888888887 888887777777777777777776


Q ss_pred             cccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHH
Q psy903          183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLM  228 (739)
Q Consensus       183 ~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~  228 (739)
                      +..+.. |.||||+|+..|+.+++++|+++|++++.++..|.||.+
T Consensus       105 ~~~d~~-g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~  149 (156)
T 1bi7_B          105 DVRDAW-GRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAE  149 (156)
T ss_dssp             SCCCTT-CCCHHHHHHHHTCHHHHHHHSSCC---------------
T ss_pred             cccCCC-CCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCcccc
Confidence            655543 357777777777777777777777777777777666655

>1bi7_B P16INK4A, MTS1, multiple tumor suppressor; cyclin dependent kinase, cyclin dependent kinase inhibitory protein, CDK, cell cycle; 3.40A {Homo sapiens} SCOP: d.211.1.1 PDB: 1a5e_A 1dc2_A 2a5e_A

Probab=99.91  E-value=1.9e-24  Score=186.89  Aligned_cols=141  Identities=23%  Similarity=0.293  Sum_probs=95.0

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCc-HHHHHH
Q psy903          120 RPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECT-PLMEAA  198 (739)
Q Consensus       120 ~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t-~L~~A~  198 (739)
                      ...+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+ .|+.+++++|++.|++++..+..+ .| |||+|+
T Consensus         9 ~~~~~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~-~~~~~~v~~Ll~~g~~~~~~d~~g-~ttpL~~A~   86 (156)
T 1bi7_B            9 MEPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPAT-LTRPVHDAA   86 (156)
T ss_dssp             -CCSTTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTT-CCCHHHHHH
T ss_pred             CccchHHHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHH-cCCHHHHHHHHHcCCCCCCcCCCC-CcHHHHHHH
Confidence            345677788888888888888888777777777777778887774 777777888877777777666544 46 777777


Q ss_pred             HcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy903          199 SSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLME  262 (739)
Q Consensus       199 ~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~  262 (739)
                      ..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+..|.||.+.
T Consensus        87 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~t~~~~  150 (156)
T 1bi7_B           87 REGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRAAAGGTRGSNHARIDAAEG  150 (156)
T ss_dssp             HHTCHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSSCC----------------
T ss_pred             HCCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHhCHHHHHHHHHHcCCCCCccCcCcCccccc
Confidence            7777777777777777777777777777777777777777777777777777777777777654

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.90  E-value=3.2e-23  Score=174.36  Aligned_cols=121  Identities=32%  Similarity=0.456  Sum_probs=52.6

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903          123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF  202 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~  202 (739)
                      +.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+..|+
T Consensus        14 ~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~-g~t~L~~A~~~~~   92 (136)
T 2jab_A           14 LGKKLLEAARAGQDDEVRILMANGADVNAKDEYGLTPLYLATAHGHLEIVEVLLKNGADVNAVDAI-GFTPLHLAAFIGH   92 (136)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-CCCHHHHHHHHTC
T ss_pred             ccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CCCHHHHHHHcCC
Confidence            344444444444444444444444444444444444444444444444444444444444333322 2344444444444


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH
Q psy903          203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE  244 (739)
Q Consensus       203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~  244 (739)
                      .+++++|+++|++++.+|..|.||||+|+..|+.+++++|++
T Consensus        93 ~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~  134 (136)
T 2jab_A           93 LEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQK  134 (136)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             HHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHH
Confidence            444444444444444444444444444444444444444443

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.90  E-value=7.1e-23  Score=170.54  Aligned_cols=124  Identities=45%  Similarity=0.691  Sum_probs=80.3

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCc
Q psy903          156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGH  235 (739)
Q Consensus       156 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~  235 (739)
                      |.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..++.+++++|+++|++++.++..|.||||+|+..++
T Consensus         2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~   80 (126)
T 1n0r_A            2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGH   80 (126)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTC
T ss_pred             CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCC-CCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCcHHHHHHHcCh
Confidence            556666666666666666666666665554433 3466666666666666666666666666666666666666666666


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903          236 EAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA  280 (739)
Q Consensus       236 ~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~  280 (739)
                      .+++++|+++|++++.+|..|.|||++|+..++.+++++|+++|+
T Consensus        81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Ga  125 (126)
T 1n0r_A           81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGA  125 (126)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTC
T ss_pred             HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCC
Confidence            666666666666666666666666666666666666666666654

>2jab_A H10-2-G3; HER2, darpin, ankyrin repeat protein, membrane protein, human epidermal growth factor receptor 2, de novo protein; 1.70A {} PDB: 3hg0_D 2xzt_G 2xzd_G 2y0b_G 2v4h_C

Probab=99.90  E-value=4.6e-23  Score=173.39  Aligned_cols=127  Identities=32%  Similarity=0.424  Sum_probs=118.6

Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903          152 TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYAC  231 (739)
Q Consensus       152 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~  231 (739)
                      ....+.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+
T Consensus        10 ~~~~~~t~l~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~L~~A~   88 (136)
T 2jab_A           10 HGSDLGKKLLEAARAGQDDEVRILMANGADVNAKDEY-GLTPLYLATAHGHLEIVEVLLKNGADVNAVDAIGFTPLHLAA   88 (136)
T ss_dssp             --CHHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHH
T ss_pred             ccccccHHHHHHHHhCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHH
Confidence            3456789999999999999999999999998877644 579999999999999999999999999999999999999999


Q ss_pred             hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcC
Q psy903          232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG  279 (739)
Q Consensus       232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~  279 (739)
                      ..|+.+++++|+++|++++..|..|.|||++|+..|+.+++++|+++|
T Consensus        89 ~~~~~~~v~~Ll~~g~~~~~~~~~g~tpl~~A~~~~~~~~~~~Ll~~G  136 (136)
T 2jab_A           89 FIGHLEIAEVLLKHGADVNAQDKFGKTAFDISIGNGNEDLAEILQKLN  136 (136)
T ss_dssp             HHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHC-
T ss_pred             HcCCHHHHHHHHHcCCCCcCcCCCCCCHHHHHHHCCCHHHHHHHHHcC
Confidence            999999999999999999999999999999999999999999999876

>1n0r_A 4ANK, 4 ankyrin repeats; structural protein; 1.50A {} SCOP: k.37.1.1

Probab=99.89  E-value=2.7e-22  Score=166.97  Aligned_cols=125  Identities=38%  Similarity=0.587  Sum_probs=119.6

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903          123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF  202 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~  202 (739)
                      +.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..++
T Consensus         2 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~l~~A~~~~~   80 (126)
T 1n0r_A            2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGH   80 (126)
T ss_dssp             CCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTC
T ss_pred             CccHHHHHHHcCcHHHHHHHHHcCCCCCCcCCCCCcHHHHHHHcCcHHHHHHHHHcCCCCcccCCC-CCcHHHHHHHcCh
Confidence            679999999999999999999999999999999999999999999999999999999998877655 5699999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCC
Q psy903          203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN  248 (739)
Q Consensus       203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~  248 (739)
                      .+++++|+++|++++.++..|.|||++|+..|+.+++++|+++|++
T Consensus        81 ~~~~~~Ll~~g~~~~~~~~~g~t~l~~A~~~~~~~~~~~Ll~~Gad  126 (126)
T 1n0r_A           81 LEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGAY  126 (126)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCC
T ss_pred             HHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCcHHHHHHHHHcCCC
Confidence            9999999999999999999999999999999999999999999975

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.88  E-value=2.6e-23  Score=175.39  Aligned_cols=133  Identities=27%  Similarity=0.344  Sum_probs=106.6

Q ss_pred             CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCc
Q psy903          146 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNT  225 (739)
Q Consensus       146 ~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t  225 (739)
                      |+|+ .++..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.|
T Consensus         1 G~d~-~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t   78 (137)
T 3c5r_A            1 GIDP-FTNHRGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHA-GWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDS   78 (137)
T ss_dssp             ---C-CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCC
T ss_pred             CCCC-CcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCC
Confidence            4566 67788888888888888888888888888888766544 468888888888888888888888888888888888


Q ss_pred             HHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903          226 PLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA  280 (739)
Q Consensus       226 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~  280 (739)
                      |||+|+..|+.+++++|+++|++++.+|..|.|||++|+..+..+++++|.+.+.
T Consensus        79 ~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~g~tpl~~A~~~~~~~~l~~l~~~~~  133 (137)
T 3c5r_A           79 PLHDAAKNGHVDIVKLLLSYGASRNAVNIFGLRPVDYTDDESMKSLLLLPEKNES  133 (137)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCGGGGCCCHHHHHHHSCC-----
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHhhccHHHHHhhcccccc
Confidence            8888888888888888888888888888888888888888888888877766543

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.88  E-value=1.1e-23  Score=187.45  Aligned_cols=140  Identities=26%  Similarity=0.230  Sum_probs=107.3

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCCcHHHHHH
Q psy903          153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS-SSGNTPLMYAC  231 (739)
Q Consensus       153 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~L~~A~  231 (739)
                      +..|.||||+|+..|+.+++++|++ +++++..+. .|+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+
T Consensus        41 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~-~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~  118 (183)
T 3deo_A           41 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDE-NGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA  118 (183)
T ss_dssp             HHHHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCT-TSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHH
T ss_pred             CCCCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence            4467788888888888888888888 777766554 34688888888888888888888888887777 77888888888


Q ss_pred             hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903          232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS  311 (739)
Q Consensus       232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  311 (739)
                      ..|+.+++++|+++|++++.+|..|.||||+|+..++.                  ..+.+++++|+..|..+++++|.+
T Consensus       119 ~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~------------------~~~~~~l~~a~~~~~~~i~~~L~~  180 (183)
T 3deo_A          119 GYVRPEVVEALVELGADIEVEDERGLTALELAREILKT------------------TPKGNPMQFGRRIGLEKVINVLEG  180 (183)
T ss_dssp             HTTCHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT------------------CCCCSHHHHHHHHHHHHHHHHHHT
T ss_pred             hcCcHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC------------------cccccHHHHHHHcCHHHHHHHHHH
Confidence            88888888888888888888888888888888764322                  125578888888888888888765


Q ss_pred             c
Q psy903          312 A  312 (739)
Q Consensus       312 ~  312 (739)
                      +
T Consensus       181 ~  181 (183)
T 3deo_A          181 Q  181 (183)
T ss_dssp             C
T ss_pred             h
Confidence            4

>3deo_A Signal recognition particle 43 kDa protein; chloroplast SRP system, signal sequence, ankyrin repeat, chromodomain, type I turn; 1.50A {Arabidopsis thaliana} SCOP: b.34.13.2 k.37.1.1 PDB: 3dep_A 1x32_A

Probab=99.87  E-value=4.9e-22  Score=176.81  Aligned_cols=139  Identities=23%  Similarity=0.270  Sum_probs=128.8

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcC
Q psy903          122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG  201 (739)
Q Consensus       122 ~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~  201 (739)
                      .+.|+|+.|+..|+.++++.|++ |.+++..+..|.||||+|+..|+.+++++|+++|++++..+...|+||||+|+..|
T Consensus        43 ~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~~~~~g~tpL~~A~~~~  121 (183)
T 3deo_A           43 EYETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYV  121 (183)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHTT-TSCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSSCCHHHHHHHTT
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHhcC
Confidence            45799999999999999999999 99999999999999999999999999999999999999888677889999999999


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          202 FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       202 ~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                      +.+++++|+++|++++.+|..|.||||+|+..++.                 ..+.++|++|+..|..+++++|.++
T Consensus       122 ~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~-----------------~~~~~~l~~a~~~~~~~i~~~L~~~  181 (183)
T 3deo_A          122 RPEVVEALVELGADIEVEDERGLTALELAREILKT-----------------TPKGNPMQFGRRIGLEKVINVLEGQ  181 (183)
T ss_dssp             CHHHHHHHHHHTCCTTCCCTTSCCHHHHHHHHHHT-----------------CCCCSHHHHHHHHHHHHHHHHHHTC
T ss_pred             cHHHHHHHHHcCCCCcCCCCCCCCHHHHHHHhccC-----------------cccccHHHHHHHcCHHHHHHHHHHh
Confidence            99999999999999999999999999999874322                 3456899999999999999999865

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.87  E-value=7.2e-22  Score=184.42  Aligned_cols=138  Identities=23%  Similarity=0.270  Sum_probs=101.7

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903          123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF  202 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~  202 (739)
                      +.|+||.|+..|+.+++++|++ |++++..+..|.||||+|+..|+.++|++|+++|++++..+...|+||||+|+..|+
T Consensus        45 g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~~~g~  123 (244)
T 3ui2_A           45 YETPWWTAARKADEQALSQLLE-DRDVDAVDENGRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAAGYVR  123 (244)
T ss_dssp             HHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHHHTTC
T ss_pred             CCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHcCC
Confidence            4677888888888888888887 777777777788888888887888888888777777777665656677777777777


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                      .+++++|+++|++++.+|..|.||||+|+..++                 ...+.|||++|+..|+.+++++|+++
T Consensus       124 ~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~-----------------~~~~~~~l~~a~~~g~~~iv~~L~~~  182 (244)
T 3ui2_A          124 PEVVEALVELGADIEVEDERGLTALELAREILK-----------------TTPKGNPMQFGRRIGLEKVINVLEGQ  182 (244)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT-----------------TCCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh-----------------ccCCCCHHHHHHHcChHHHHHHHHHh
Confidence            777777777777777777777777777765211                 13455677777777777777777664

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.86  E-value=3e-21  Score=185.30  Aligned_cols=137  Identities=20%  Similarity=0.192  Sum_probs=66.4

Q ss_pred             chHHHHHHHcCCHHHHHHHHhcCCCCCc------CCCCCCcHHHHHHHc---CcHHHHHHHHhCCCCccccCCCCCCcHH
Q psy903          124 ERSLVQACSDGDVKTVKKLLTEGRSVHE------TTDEGESLLSLACSA---GYYELAQVLLAMHANVEDRGIKGECTPL  194 (739)
Q Consensus       124 ~~~l~~A~~~~~~~~~~~ll~~~~~~~~------~~~~g~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~~t~L  194 (739)
                      .++|+.|+..|+.+.++.|++.|++++.      .+..|.||||+|+..   |+.+++++|+++|++++..+. .|.|||
T Consensus       152 ~~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~-~G~TpL  230 (301)
T 2b0o_E          152 PQRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAA-DGNTAL  230 (301)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCT-TCCCHH
T ss_pred             HHHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCC-CCCCHH
Confidence            3455555555555555555555555554      344555555555554   445555555555554444432 233555


Q ss_pred             HHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          195 MEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG  267 (739)
Q Consensus       195 ~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~  267 (739)
                      |+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++      .|.||||+|+..|
T Consensus       231 h~A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~------~g~tpLh~A~~~g  297 (301)
T 2b0o_E          231 HYAALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG------TFAFPLHVDYSWV  297 (301)
T ss_dssp             HHHHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH------TTSSCCC------
T ss_pred             HHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC------CCCChhHHHHhcC
Confidence            555555555555555555555555555555555555555555555555544432      2344444444443

>3c5r_A BARD-1, BRCA1-associated ring domain protein 1; ankyrin repeat, helix, extended loop, four repeat, PR ANK repeat, disease mutation, metal-binding; 2.00A {Homo sapiens} SCOP: k.37.1.1

Probab=99.86  E-value=8.3e-22  Score=166.15  Aligned_cols=122  Identities=33%  Similarity=0.410  Sum_probs=69.7

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC
Q psy903          189 GECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH  268 (739)
Q Consensus       189 ~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~  268 (739)
                      .|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus         9 ~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~   88 (137)
T 3c5r_A            9 RGETLLHIASIKGDIPSVEYLLQNGSDPNVKDHAGWTPLHEACNHGHLKVVELLLQHKALVNTTGYQNDSPLHDAAKNGH   88 (137)
T ss_dssp             TCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCGGGCCHHHHHHHTTC
T ss_pred             CCCCHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcCCHHHHHHHHHcCCcccCcCCCCCCHHHHHHHcCC
Confidence            34566666666666666666666666666666666666666666666666666666666666555555566666665555


Q ss_pred             hHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903          269 VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS  311 (739)
Q Consensus       269 ~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  311 (739)
                      .+++++|+++|++++.. +..|.||+++|+..+..+++++|.+
T Consensus        89 ~~~v~~Ll~~ga~~~~~-~~~g~tpl~~A~~~~~~~~l~~l~~  130 (137)
T 3c5r_A           89 VDIVKLLLSYGASRNAV-NIFGLRPVDYTDDESMKSLLLLPEK  130 (137)
T ss_dssp             HHHHHHHHHTTCCTTCC-CTTSCCGGGGCCCHHHHHHHSCC--
T ss_pred             HHHHHHHHHcCCCCCCC-CCCCCCHHHHHhhccHHHHHhhccc
Confidence            55555555555555443 3335555555555555555544443

>3ui2_A Signal recognition particle 43 kDa protein, chlor; ankyrin repeat, chromodomain, aromatic CAGE, signal recognit particle, protein targeting; 3.18A {Arabidopsis thaliana} PDB: 1x3q_A 2hug_A

Probab=99.86  E-value=1.5e-21  Score=182.28  Aligned_cols=142  Identities=25%  Similarity=0.215  Sum_probs=126.5

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCCcHHHHHH
Q psy903          153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS-SSGNTPLMYAC  231 (739)
Q Consensus       153 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~L~~A~  231 (739)
                      +..|.||||+|+..|+.+++++|++ |++++..+.. |+||||+|+..|+.+++++|+++|++++.++ ..|.||||+|+
T Consensus        42 ~~~g~t~L~~A~~~g~~~~v~~Ll~-~~~~~~~d~~-g~t~L~~A~~~g~~~~v~~Ll~~ga~~~~~~~~~g~t~L~~A~  119 (244)
T 3ui2_A           42 VSEYETPWWTAARKADEQALSQLLE-DRDVDAVDEN-GRTALLFVAGLGSDKCVRLLAEAGADLDHRDMRGGLTALHMAA  119 (244)
T ss_dssp             HHHHHHHHHHHHTTTCHHHHHHTTT-TCCTTCBCTT-SCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCSSSCCCHHHHHH
T ss_pred             ccCCCCHHHHHHHcCCHHHHHHHHc-CCCCCCcCCC-CCCHHHHHHHCCCHHHHHHHHHcCCCCCcCCCCCCCCHHHHHH
Confidence            3568899999999999999999999 8888877654 5799999999999999999999999999988 88999999999


Q ss_pred             hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903          232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS  311 (739)
Q Consensus       232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  311 (739)
                      ..|+.+++++|+++|++++.+|..|.||||+|+..++                  ...+.++|++|+..|+.+++++|.+
T Consensus       120 ~~g~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~------------------~~~~~~~l~~a~~~g~~~iv~~L~~  181 (244)
T 3ui2_A          120 GYVRPEVVEALVELGADIEVEDERGLTALELAREILK------------------TTPKGNPMQFGRRIGLEKVINVLEG  181 (244)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHHT------------------TCCCSSHHHHHHHHHHHHHHHHHHH
T ss_pred             HcCCHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHHHh------------------ccCCCCHHHHHHHcChHHHHHHHHH
Confidence            9999999999999999999999999999999986322                  1236799999999999999999988


Q ss_pred             cCC
Q psy903          312 AGA  314 (739)
Q Consensus       312 ~~~  314 (739)
                      .+.
T Consensus       182 ~~~  184 (244)
T 3ui2_A          182 QVF  184 (244)
T ss_dssp             HHE
T ss_pred             hcc
Confidence            644

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.85  E-value=1.5e-21  Score=160.86  Aligned_cols=108  Identities=27%  Similarity=0.326  Sum_probs=60.8

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG  234 (739)
Q Consensus       155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~  234 (739)
                      .|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus         6 ~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~tpL~~A~~~~   84 (123)
T 3aaa_C            6 MCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEG-GRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEG   84 (123)
T ss_dssp             -CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTT-SSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTTSCCHHHHHHHHT
T ss_pred             ccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCC-CCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCCCCCHHHHHHHcC
Confidence            3445555555555555555555555555444322 345555555555555555555555555555555566666666666


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903          235 HEAVVRVLLECGANVEDHNENGHTPLMEA  263 (739)
Q Consensus       235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A  263 (739)
                      +.+++++|+++|++++.+|..|.|||++|
T Consensus        85 ~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A  113 (123)
T 3aaa_C           85 HVSCVKLLLSKGADKTVKGPDGLTAFEAT  113 (123)
T ss_dssp             CHHHHHHHHHTTCCTTCCCTTSCCHHHHC
T ss_pred             CHHHHHHHHHcCCCCCCcCCCCCCHHHHh
Confidence            66666666666655555555566666555

>2b0o_E UPLC1; arfgap, structural genomics, structural genomics consortium, SGC, metal binding protein; 2.06A {Homo sapiens}

Probab=99.85  E-value=1.9e-21  Score=186.72  Aligned_cols=138  Identities=22%  Similarity=0.166  Sum_probs=81.2

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCcccc-----CCCCCCcHHHHHHHc---CcHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy903          158 SLLSLACSAGYYELAQVLLAMHANVEDR-----GIKGECTPLMEAASS---GFIEIVRLLINHGADVNGQSSSGNTPLMY  229 (739)
Q Consensus       158 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~-----~~~~~~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~  229 (739)
                      ++|+.|+..|+.+.++.|++.|++++..     .+..|.||||+|+..   ++.+++++|+++|++++.+|..|.||||+
T Consensus       153 ~~L~~A~~~g~~~~v~~ll~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadvn~~d~~G~TpLh~  232 (301)
T 2b0o_E          153 QRLWTAICNRDLLSVLEAFANGQDFGQPLPGPDAQAPEELVLHLAVKVANQASLPLVDFIIQNGGHLDAKAADGNTALHY  232 (301)
T ss_dssp             HHHHHHHHTTCHHHHHHHHHTTCCTTSCEECSSSCSCEECHHHHHHHTCCTTTHHHHHHHHHHSSCTTCCCTTCCCHHHH
T ss_pred             HHHhhhhhccCHHHHHHHHhcCCcccccCCCcccCCCCccHHHHHHHhcccCcHHHHHHHHhcCCCCCCCCCCCCCHHHH
Confidence            4566666666666666666666665542     233445666666665   56666666666666666666666666666


Q ss_pred             HHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCC
Q psy903          230 ACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGH  302 (739)
Q Consensus       230 A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~  302 (739)
                      |+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|+++|++       .+.||||+|+..|+
T Consensus       233 A~~~g~~~~v~~Ll~~gad~~~~d~~G~TpL~~A~~~~~~~iv~~Ll~~ga~-------~g~tpLh~A~~~g~  298 (301)
T 2b0o_E          233 AALYNQPDCLKLLLKGRALVGTVNEAGETALDIARKKHHKECEELLEQAQAG-------TFAFPLHVDYSWVI  298 (301)
T ss_dssp             HHHTTCHHHHHHHHHTTCCCSCCCTTSCCHHHHHHHHTCHHHHHHHHHHHHH-------TTSSCCC-------
T ss_pred             HHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHhcCC-------CCCChhHHHHhcCC
Confidence            6666666666666666666666666666666666666666666666665543       24466666665543

>3aaa_C Myotrophin, protein V-1; actin capping protein, barbed END capping, inhibition, prote binding, actin capping, actin-binding, cytoskeleton, ANK RE; 2.20A {Homo sapiens} PDB: 1myo_A 2kxp_C 2myo_A

Probab=99.84  E-value=6.8e-21  Score=156.94  Aligned_cols=118  Identities=25%  Similarity=0.399  Sum_probs=106.5

Q ss_pred             CCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHH
Q psy903          120 RPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS  199 (739)
Q Consensus       120 ~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~  199 (739)
                      ...+.++|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+.
T Consensus         4 ~~~~~~~l~~A~~~~~~~~v~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~-g~tpL~~A~~   82 (123)
T 3aaa_C            4 GSMCDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH-HITPLLSAVY   82 (123)
T ss_dssp             ---CHHHHHHHHHTTCHHHHHHHHHTTCCTTSCCTTSSCHHHHHHHTTCHHHHHHHHTTTCCTTCCCTT-SCCHHHHHHH
T ss_pred             ccccchHHHHHHHcCCHHHHHHHHHcCCCcCccCCCCCcHHHHHHHcCCHHHHHHHHHcCCCCCcCCCC-CCCHHHHHHH
Confidence            346789999999999999999999999999999999999999999999999999999999999887755 5699999999


Q ss_pred             cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHH
Q psy903          200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAV  238 (739)
Q Consensus       200 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~  238 (739)
                      .|+.+++++|+++|++++.+|..|.||||+|...+..++
T Consensus        83 ~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~l  121 (123)
T 3aaa_C           83 EGHVSCVKLLLSKGADKTVKGPDGLTAFEATDNQAIKAL  121 (123)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHCCCHHHHHH
T ss_pred             cCCHHHHHHHHHcCCCCCCcCCCCCCHHHHhCCHHHHHH
Confidence            999999999999999999999999999999954444443

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.83  E-value=7.7e-21  Score=175.47  Aligned_cols=129  Identities=22%  Similarity=0.206  Sum_probs=71.3

Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCcHHHHHH
Q psy903          153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH-GADVNGQSSSGNTPLMYAC  231 (739)
Q Consensus       153 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~L~~A~  231 (739)
                      +..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.+++++|+++ |++++.+|..|.||||+|+
T Consensus        70 ~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~-g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~g~tpL~~A~  148 (222)
T 3ehr_A           70 AESIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKA-GSTALYWACHGGHKDIVEMLFTQPNIELNQQNKLGDTALHAAA  148 (222)
T ss_dssp             EEEESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTTSCCHHHHHH
T ss_pred             ccccccccccccccCcHHHHHHHHhCCCCccccCCC-CCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCCCCCHHHHHH
Confidence            344555666666666666666666665555544432 34666666666666666666655 6666666666666666666


Q ss_pred             hcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCC
Q psy903          232 AGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGI  282 (739)
Q Consensus       232 ~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~  282 (739)
                      ..|+.+++++|+++|++++.+|..|.|||++|+..+..++++.|++.++..
T Consensus       149 ~~~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~  199 (222)
T 3ehr_A          149 WKGYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVR  199 (222)
T ss_dssp             HHTCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC---------
T ss_pred             HcCCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhh
Confidence            666666666666666666666666666666666666666666665555443

>3ehr_A Osteoclast-stimulating factor 1; beta barrel, helix-turn-helix, SH3, ankyrin repeat, signaling protein, ANK repeat, cytoplasm, phosphoprotein; 1.95A {Homo sapiens} PDB: 3ehq_A

Probab=99.83  E-value=1.2e-20  Score=174.19  Aligned_cols=134  Identities=19%  Similarity=0.271  Sum_probs=112.8

Q ss_pred             CCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhC-CCCccccCCCCCCcHHHHHHHc
Q psy903          122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM-HANVEDRGIKGECTPLMEAASS  200 (739)
Q Consensus       122 ~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~t~L~~A~~~  200 (739)
                      .+.|+|+.|+..|+.+++++|++.|++++..+..|.||||+|+..|+.+++++|++. |++++..+.. |.||||+|+..
T Consensus        72 ~g~t~L~~A~~~g~~~~v~~Ll~~g~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~g~~~~~~d~~-g~tpL~~A~~~  150 (222)
T 3ehr_A           72 SIDNPLHEAAKRGNLSWLRECLDNRVGVNGLDKAGSTALYWACHGGHKDIVEMLFTQPNIELNQQNKL-GDTALHAAAWK  150 (222)
T ss_dssp             EESCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHTTSTTCCCCCCCTT-SCCHHHHHHHH
T ss_pred             ccccccccccccCcHHHHHHHHhCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHcCCCCCccccCCC-CCCHHHHHHHc
Confidence            467999999999999999999999999999999999999999999999999999999 8998877655 56999999999


Q ss_pred             CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCC
Q psy903          201 GFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENG  256 (739)
Q Consensus       201 ~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~  256 (739)
                      |+.+++++|+++|++++.++..|.|||++|+..++.++++.|++.|+.....+..+
T Consensus       151 ~~~~~v~~Ll~~ga~~~~~~~~g~t~l~~A~~~~~~~~l~~l~~~~~~~~~~~~~~  206 (222)
T 3ehr_A          151 GYADIVQLLLAKGARTDLRNIEKKLAFDMATNAACASLLKKKQGTDAVRTLSNAED  206 (222)
T ss_dssp             TCHHHHHHHHHHTCCSCCCCTTSCCHHHHCCSHHHHHHHC----------------
T ss_pred             CCHHHHHHHHHcCCCCccccCCCCCHHHHhcchhHHHHHHHHhccchhhhccchhh
Confidence            99999999999999999999999999999999999999999999998876655443

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.83  E-value=2.4e-19  Score=170.03  Aligned_cols=92  Identities=29%  Similarity=0.433  Sum_probs=51.3

Q ss_pred             CCcHHHHHHHc---CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhc
Q psy903          190 ECTPLMEAASS---GFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASA  266 (739)
Q Consensus       190 ~~t~L~~A~~~---~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~  266 (739)
                      |.||||+|+..   |+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..
T Consensus       169 g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~  248 (278)
T 1dcq_A          169 DETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRL  248 (278)
T ss_dssp             TCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHT
T ss_pred             CCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCccCCCCCHHHHHHHc
Confidence            34555555555   455555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             CChHHHHHHHHcCCC
Q psy903          267 GHVGVAKILLEYGAG  281 (739)
Q Consensus       267 ~~~~ii~~Ll~~~~~  281 (739)
                      |+.+++++|+++|+.
T Consensus       249 ~~~~~v~~Ll~~ga~  263 (278)
T 1dcq_A          249 KHEHCEELLTQALSG  263 (278)
T ss_dssp             TCHHHHHHHHHHHTT
T ss_pred             CCHHHHHHHHHcCCC
Confidence            555555555555443

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.82  E-value=7.7e-20  Score=141.70  Aligned_cols=91  Identities=51%  Similarity=0.775  Sum_probs=72.4

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCCh
Q psy903          190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHV  269 (739)
Q Consensus       190 ~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~  269 (739)
                      |+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus         2 g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~~~   81 (93)
T 1n0q_A            2 GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNGHL   81 (93)
T ss_dssp             -CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCH
T ss_pred             CCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCH
Confidence            45788888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHHHcCC
Q psy903          270 GVAKILLEYGA  280 (739)
Q Consensus       270 ~ii~~Ll~~~~  280 (739)
                      +++++|+++|+
T Consensus        82 ~~~~~Ll~~ga   92 (93)
T 1n0q_A           82 EVVKLLLEAGA   92 (93)
T ss_dssp             HHHHHHHHTTC
T ss_pred             HHHHHHHHcCC
Confidence            88888887765

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.81  E-value=9.5e-20  Score=178.38  Aligned_cols=126  Identities=25%  Similarity=0.312  Sum_probs=104.7

Q ss_pred             CCCcHHHHHHHc-CcHHHHHHHHhCCCCccccCC-CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHh
Q psy903          155 EGESLLSLACSA-GYYELAQVLLAMHANVEDRGI-KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACA  232 (739)
Q Consensus       155 ~g~t~L~~A~~~-~~~~~v~~Ll~~~~~~~~~~~-~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~  232 (739)
                      .+.|+||.|+.. |+.+++++|++.|++++..+. ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.
T Consensus       198 ~~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~G~TpLh~A~~  277 (368)
T 3jue_A          198 HPGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSAGRGPLHHATI  277 (368)
T ss_dssp             CHHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             CCCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCCCCCHHHHHHH
Confidence            345788888888 888888888888888877652 455688888888888888888888888888888888888888888


Q ss_pred             cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903          233 GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA  280 (739)
Q Consensus       233 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~  280 (739)
                      .|+.+++++|+++|++++..|..|.||||+|+..++.+++++|++.+.
T Consensus       278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~  325 (368)
T 3jue_A          278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKM  325 (368)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC
T ss_pred             cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence            888888888888888888888888888888888888888888887653

>1dcq_A PYK2-associated protein beta; zinc-binding module, ankyrin repeats, metal binding protein; 2.10A {Mus musculus} SCOP: d.211.1.1 g.45.1.1

Probab=99.81  E-value=5e-19  Score=167.87  Aligned_cols=192  Identities=19%  Similarity=0.135  Sum_probs=125.8

Q ss_pred             CCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCc-CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHH
Q psy903          119 PRPQNERSLVQACSDGDVKTVKKLLTEGRSVHE-TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEA  197 (739)
Q Consensus       119 ~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~-~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A  197 (739)
                      .+..+.+.++.+...|+....+.+...-.+... ....+...    .....+-..+++................++|+.|
T Consensus        62 ~d~~~~~~l~~~~~~GN~~~n~i~e~~l~~~~~~kP~~~s~~----~~~~~fI~aKYl~~~f~~~~~~~~~~~l~~l~~a  137 (278)
T 1dcq_A           62 LDVLGTSELLLAKNIGNAGFNEIMECCLPSEDPVKPNPGSDM----IARKDYITAKYMERRYARKKHADTAAKLHSLCEA  137 (278)
T ss_dssp             TSCCCGGGGHHHHHSCHHHHHHHHTTTCCSSSCCSCCTTCCH----HHHHHHHHHHHTTCTTSCCCSSSHHHHHHHHHHH
T ss_pred             cCCCCHHHHHHHHHcCcHHHHHHHHhhCChhhcCCCCCCCCH----HHHHHHHHHHHHHhhcccccccccchhhhhhhhH
Confidence            344566677777777776665554332111111 10111111    1112222233444333322222222234778888


Q ss_pred             HHcCcHHHHHHHHHCCCCC------CCCCCCCCcHHHHHHhc---CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCC
Q psy903          198 ASSGFIEIVRLLINHGADV------NGQSSSGNTPLMYACAG---GHEAVVRVLLECGANVEDHNENGHTPLMEAASAGH  268 (739)
Q Consensus       198 ~~~~~~~~~~~Ll~~g~~~------~~~~~~~~t~L~~A~~~---~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~  268 (739)
                      +..|+.+.++.+++.|+++      +..+..|.||||+|+..   |+.+++++|+++|++++.+|..|.||||+|+..|+
T Consensus       138 ~~~~d~~~~~~ll~~g~~~~~~~~l~~~~~~g~t~Lh~A~~~~~~~~~~~v~~Ll~~ga~in~~d~~g~TpLh~A~~~g~  217 (278)
T 1dcq_A          138 VKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDN  217 (278)
T ss_dssp             HHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTC
T ss_pred             hhhcccHHHHHHHHhhcchhhhccccccccCCCCcchHHHHhcccchHHHHHHHHHCCCCccccCCCCCCHHHHHHHcCC
Confidence            8888888888888888874      34477788888888887   78888888888888888888888888888888888


Q ss_pred             hHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCC
Q psy903          269 VGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD  315 (739)
Q Consensus       269 ~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~  315 (739)
                      .+++++|+++|++++.. +..|.||||+|+..|+.+++++|++.|++
T Consensus       218 ~~~v~~Ll~~gad~~~~-d~~g~tpL~~A~~~~~~~~v~~Ll~~ga~  263 (278)
T 1dcq_A          218 AECLKLLLRGKASIEIA-NESGETPLDIAKRLKHEHCEELLTQALSG  263 (278)
T ss_dssp             HHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHHHHHHTT
T ss_pred             HHHHHHHHHcCCCCCCc-cCCCCCHHHHHHHcCCHHHHHHHHHcCCC
Confidence            88888888888887764 44578888888888888888888887764

>3jue_A Arfgap with coiled-coil, ANK repeat and PH domain containing protein 1; arfgap domain, zinc-binding module, GTPase activ metal-binding, nitration; 2.30A {Homo sapiens} PDB: 3t9k_A 4f1p_A

Probab=99.80  E-value=2.4e-19  Score=175.48  Aligned_cols=142  Identities=22%  Similarity=0.245  Sum_probs=117.0

Q ss_pred             CchHHHHHHHc-CCHHHHHHHHhcCCCCCcCC--CCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHH
Q psy903          123 NERSLVQACSD-GDVKTVKKLLTEGRSVHETT--DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAAS  199 (739)
Q Consensus       123 ~~~~l~~A~~~-~~~~~~~~ll~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~  199 (739)
                      ..++|+.|+.. |+.++++.|++.|++++..+  ..|.||||+|+..|+.+++++|+++|++++..+.. |.||||+|+.
T Consensus       199 ~~t~L~~Aa~~~g~~~~v~~LL~~Gadvn~~~~~~~g~TpLh~Aa~~g~~~iv~~LL~~Gadvn~~d~~-G~TpLh~A~~  277 (368)
T 3jue_A          199 PGALLFRASGHPPSLPTMADALAHGADVNWVNGGQDNATPLIQATAANSLLACEFLLQNGANVNQADSA-GRGPLHHATI  277 (368)
T ss_dssp             HHHHHHHHTSSSCCHHHHHHHHHTTCCTTCCCTTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHH
T ss_pred             CCcHHHHHHHccCCHHHHHHHHHcCCCCCccccccCCCCHHHHHHHCCCHHHHHHHHHcCCCCCCCCCC-CCCHHHHHHH
Confidence            46799999999 99999999999999999998  88999999999999999999999999999877654 5699999999


Q ss_pred             cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCC---CCCCCCCCCCcHHHHHHh
Q psy903          200 SGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA---NVEDHNENGHTPLMEAAS  265 (739)
Q Consensus       200 ~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~---~~~~~~~~~~t~L~~A~~  265 (739)
                      .|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|++.+.   +....+..+.|+++.+..
T Consensus       278 ~g~~~~v~~LL~~Gad~~~~d~~G~TpL~~A~~~g~~~iv~lLl~~~~~~~~~~~~~~~~~t~l~i~~~  346 (368)
T 3jue_A          278 LGHTGLACLFLKRGADLGARDSEGRDPLTIAMETANADIVTLLRLAKMREAEAAQGQAGDETYLDIFRD  346 (368)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHC---------------------
T ss_pred             cCcHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHCCCHHHHHHHHHcCCCcccccccCCCCCCHHHHHHH
Confidence            999999999999999999999999999999999999999999998753   333344556666666543

>1n0q_A 3ANK, 3 ankyrin repeats; structural protein; 1.26A {} SCOP: k.37.1.1

Probab=99.80  E-value=5e-19  Score=137.10  Aligned_cols=93  Identities=42%  Similarity=0.644  Sum_probs=78.5

Q ss_pred             CCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG  234 (739)
Q Consensus       155 ~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~  234 (739)
                      +|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|
T Consensus         1 ~g~t~L~~A~~~~~~~~v~~Ll~~g~~~n~~d~~-g~t~L~~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~t~l~~A~~~~   79 (93)
T 1n0q_A            1 NGRTPLHLAARNGHLEVVKLLLEAGADVNAKDKN-GRTPLHLAARNGHLEVVKLLLEAGADVNAKDKNGRTPLHLAARNG   79 (93)
T ss_dssp             --CCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTT
T ss_pred             CCCcHHHHHHHcCCHHHHHHHHHcCCCCcccCCC-CCCHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcC
Confidence            3778888888888888888888888888776644 468999999888999999999999998888888999999999999


Q ss_pred             cHHHHHHHHHCCCC
Q psy903          235 HEAVVRVLLECGAN  248 (739)
Q Consensus       235 ~~~~v~~Ll~~~~~  248 (739)
                      +.+++++|+++|++
T Consensus        80 ~~~~~~~Ll~~ga~   93 (93)
T 1n0q_A           80 HLEVVKLLLEAGAY   93 (93)
T ss_dssp             CHHHHHHHHHTTCC
T ss_pred             CHHHHHHHHHcCCC
Confidence            99999999988864

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.78  E-value=5.2e-19  Score=143.64  Aligned_cols=109  Identities=36%  Similarity=0.451  Sum_probs=85.8

Q ss_pred             cCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903          151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYA  230 (739)
Q Consensus       151 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A  230 (739)
                      .+|..|.||||+|+..|+.+++++|++.|++++..+.. |.||||+|+..++.+++++|+++|++++.+|..|.||||+|
T Consensus         4 ~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~-g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A   82 (115)
T 2l6b_A            4 WGSKDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKD-GNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLA   82 (115)
T ss_dssp             CCSCSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSS-SCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHH
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCC-CCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHH
Confidence            45777888888888888888888888888877766543 45888888888888888888888888888888888888888


Q ss_pred             HhcCcHHHHHHHHHCCCCCCCCCCCCCcHH
Q psy903          231 CAGGHEAVVRVLLECGANVEDHNENGHTPL  260 (739)
Q Consensus       231 ~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L  260 (739)
                      +..++.+++++|+++|++++..+..|.+|-
T Consensus        83 ~~~~~~~~~~~Ll~~ga~~n~~~~~~~~~~  112 (115)
T 2l6b_A           83 KKNGHHEIVKLLDAKGADVNARSWGSSHHH  112 (115)
T ss_dssp             HTTTCHHHHHHHHTTSSSHHHHSCCCC---
T ss_pred             HHCCCHHHHHHHHHcCCCCCcCCccccccc
Confidence            888888888888888888888877777763

>2l6b_A NR1C; ankyrin, consensus, repeat protein, ising model, DE NOV; NMR {Escherichia coli}

Probab=99.74  E-value=2.9e-18  Score=139.25  Aligned_cols=100  Identities=42%  Similarity=0.618  Sum_probs=83.5

Q ss_pred             CCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcC
Q psy903          188 KGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG  267 (739)
Q Consensus       188 ~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~  267 (739)
                      ..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.+++++|+++|++++.+|..|.|||++|+..+
T Consensus         7 ~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~d~~g~tpl~~A~~~~   86 (115)
T 2l6b_A            7 KDGNTPLHNAAKNGHAEEVKKLLSKGADVNARSKDGNTPLHLAAKNGHAEIVKLLLAKGADVNARSKDGNTPEHLAKKNG   86 (115)
T ss_dssp             CSSCCHHHHHHHHTCHHHHHHHTTTTCCSSCCCSSSCCTTHHHHTTTCHHHHHHHTTTTCCTTCCCTTCCCTTHHHHTTT
T ss_pred             CCCCCHHHHHHHcCCHHHHHHHHHcCCCCCCcCCCCCCHHHHHHHcCcHHHHHHHHHcCCCCcccCCCCCCHHHHHHHCC
Confidence            44568888888888888888888888888888888888888888888888888888888888888888888888888888


Q ss_pred             ChHHHHHHHHcCCCCcccCc
Q psy903          268 HVGVAKILLEYGAGINTHSN  287 (739)
Q Consensus       268 ~~~ii~~Ll~~~~~~~~~~~  287 (739)
                      +.+++++|+++|++++....
T Consensus        87 ~~~~~~~Ll~~ga~~n~~~~  106 (115)
T 2l6b_A           87 HHEIVKLLDAKGADVNARSW  106 (115)
T ss_dssp             CHHHHHHHHTTSSSHHHHSC
T ss_pred             CHHHHHHHHHcCCCCCcCCc
Confidence            88888888888887776533

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.68  E-value=1.4e-16  Score=127.49  Aligned_cols=86  Identities=38%  Similarity=0.575  Sum_probs=58.7

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCCh
Q psy903          190 ECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHV  269 (739)
Q Consensus       190 ~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~  269 (739)
                      |.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..|+.
T Consensus        24 g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~A~~~~~~  103 (110)
T 2zgd_A           24 LGKKLLEAARAGQDDEVRILMANGADVAAKDKNGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDISIDNGNE  103 (110)
T ss_dssp             HHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCH
T ss_pred             cchHHHHHHHcCCHHHHHHHHHcCCCCCccCCCCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHHHHHcCCH
Confidence            34666666666666666666666666666666666777777766666777777666666666666666677766666666


Q ss_pred             HHHHHH
Q psy903          270 GVAKIL  275 (739)
Q Consensus       270 ~ii~~L  275 (739)
                      +++++|
T Consensus       104 ~~~~~L  109 (110)
T 2zgd_A          104 DLAEIL  109 (110)
T ss_dssp             HHHHHH
T ss_pred             HHHHHh
Confidence            666655

>2zgd_A 3 repeat synthetic ankyrin; ankyrin repeat, hydroxylated, de novo protein; 1.90A {Synthetic} PDB: 2zgg_A 2xen_A

Probab=99.64  E-value=6.2e-16  Score=123.67  Aligned_cols=92  Identities=30%  Similarity=0.416  Sum_probs=75.1

Q ss_pred             CcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHH
Q psy903          150 HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMY  229 (739)
Q Consensus       150 ~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~  229 (739)
                      ...+.+|.|+||+|+..|+.+++++|++.|++++..+. .|.||||+|+..|+.+++++|+++|++++.+|..|.||||+
T Consensus        18 ~~~~~~g~t~L~~A~~~g~~~~v~~Ll~~g~~i~~~d~-~g~tpLh~A~~~~~~~~v~~Ll~~ga~~~~~d~~g~tpl~~   96 (110)
T 2zgd_A           18 SHMGSDLGKKLLEAARAGQDDEVRILMANGADVAAKDK-NGSTPLHLAARNGHLEVVKLLLEAGADVXAQDKFGKTAFDI   96 (110)
T ss_dssp             ----CCHHHHHHHHHHHTCHHHHHHHHHTTCCTTCCCT-TCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHH
T ss_pred             cccCCccchHHHHHHHcCCHHHHHHHHHcCCCCCccCC-CCCCHHHHHHHcCCHHHHHHHHHcCCCccccccCCCcHHHH
Confidence            34567788888888888888888888888888877664 45688888888888888888888888888888888999999


Q ss_pred             HHhcCcHHHHHHH
Q psy903          230 ACAGGHEAVVRVL  242 (739)
Q Consensus       230 A~~~~~~~~v~~L  242 (739)
                      |+..|+.+++++|
T Consensus        97 A~~~~~~~~~~~L  109 (110)
T 2zgd_A           97 SIDNGNEDLAEIL  109 (110)
T ss_dssp             HHHHTCHHHHHHH
T ss_pred             HHHcCCHHHHHHh
Confidence            9998888888876

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	739
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	6e-67
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	6e-57
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	9e-49
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-45
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	2e-44
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	1e-30
d1n11a_	408	d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [Ta	4e-24
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	8e-34
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	2e-31
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-30
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	1e-29
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	9e-27
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	4e-19
d2ajaa1	346	a.118.24.1 (A:3-348) Hypothetical protein LPG2416	3e-15
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	2e-33
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-30
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-29
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-29
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-28
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	3e-26
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	1e-11
d1wdya_	285	d.211.1.1 (A:) RNase L, 2-5a-dependent ribonucleas	5e-04
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	7e-32
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-22
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-20
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-19
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	3e-19
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-14
d1uoha_	223	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-11
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	2e-24
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-23
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-23
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	4e-23
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	7e-22
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-21
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	3e-21
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	7e-16
d1oy3d_	255	d.211.1.1 (D:) Transcription factor inhibitor I-ka	1e-04
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	3e-22
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-21
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-21
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	6e-21
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-19
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	1e-18
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	5e-17
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	3e-14
d1s70b_	291	d.211.1.1 (B:) Myosin phosphatase targeting subuni	2e-09
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	5e-21
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	5e-17
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-15
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-15
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-14
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-14
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	2e-12
d1sw6a_	301	d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker	1e-10
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	6e-21
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-20
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	6e-20
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	6e-19
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	1e-17
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-17
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	5e-14
d2fo1e1	277	d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis ele	2e-13
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-20
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	3e-16
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	5e-15
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	3e-14
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	5e-14
d1ot8a_	209	d.211.1.1 (A:) Neurogenic locus notch receptor dom	2e-12
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	2e-19
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-19
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	4e-19
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	6e-17
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	9e-16
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	1e-14
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	5e-13
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	9e-13
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	3e-05
d1k1aa_	228	d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId:	0.004
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	2e-17
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	7e-14
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	4e-12
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	7e-12
d1iknd_	221	d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapien	1e-10
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	5e-17
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-13
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-12
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-08
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	3e-07
d1awcb_	153	d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {	2e-06
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-16
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-14
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	2e-14
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	6e-14
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	9e-14
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	4e-13
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	1e-09
d1ixva_	229	d.211.1.1 (A:) 26S proteasome non-ATPase regulator	0.003
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	8e-16
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	9e-12
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	4e-10
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	6e-06
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	2e-05
d1ycsb1	130	d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens)	2e-05
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	7e-15
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	3e-14
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-12
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	1e-07
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-07
d1dcqa1	154	d.211.1.1 (A:369-522) Pyk2-associated protein beta	2e-07
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-14
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	2e-10
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	3e-10
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	1e-09
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	5e-09
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	7e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	8e-06
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	0.002
d1ihba_	156	d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens	0.002
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	5e-11
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	1e-10
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-08
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	8e-07
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	2e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	6e-04
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	0.003
d1bd8a_	156	d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Huma	0.004
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	3e-10
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	1e-09
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	1e-08
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	2e-07
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	5e-05
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	3e-04
d1bi7b_	125	d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Huma	0.002
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	1e-06
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	4e-06
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	3e-04
d1myoa_	118	d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus)	5e-04

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  224 bits (572), Expect = 6e-67
 Identities = 129/457 (28%), Positives = 185/457 (40%), Gaps = 76/457 (16%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
           TPL  A+  G + IV+ L+  GA  N  +    TPL  A   GH  V + LL+  A V  
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
             ++  TPL  AA  GH  + K+LLE  A  N  +       L +A  +GH++ V  LL 
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHT-PLHIAAREGHVETVLALLE 120

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSIS 371
             A Q   T +  T L  A+  G V VA+LLL+  A   +A  ++   P           
Sbjct: 121 KEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH-PNAAGKNGLTP----------- 168

Query: 372 YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 431
                 L  A    ++  VK LL  G S H     G + L +A      E+A+ LL    
Sbjct: 169 ------LHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGG 222

Query: 432 NVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKI 491
           +     ++G  TPL  AA    Q    E V+         N  + +G             
Sbjct: 223 SANAESVQG-VTPLHLAA----QEGHAEMVALLLSKQANGNLGNKSG------------- 264

Query: 492 NAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYL 548
                    T L L    G + VAD L+K+G  ++       TPL  A+  G+++LV++L
Sbjct: 265 --------LTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFL 316

Query: 549 LDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQL 608
           L   A V+AKT+ G + L  A + GHTD+  LLL  GA+                     
Sbjct: 317 LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGAS--------------------- 355

Query: 609 LLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
                   +  +  G T L  A   G+  V D+L   
Sbjct: 356 -------PNEVSSDGTTPLAIAKRLGYISVTDVLKVV 385

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  197 bits (502), Expect = 6e-57
 Identities = 123/426 (28%), Positives = 182/426 (42%), Gaps = 58/426 (13%)

Query: 258 TPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQE 317
           TPL  A+  GH+ + K LL+ GA  N  SN   E+ L +A   GH ++ ++LL   A   
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNV-SNVKVETPLHMAARAGHTEVAKYLLQNKAKVN 60

Query: 318 HKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRS 377
            K  +  T L  A+  GH  + KLLL+                      P+  +      
Sbjct: 61  AKAKDDQTPLHCAARIGHTNMVKLLLE------------------NNANPNLATTAGHTP 102

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 437
           L  A  +G V+TV  LL +  S    T +G + L +A   G   +A++LL   A+    G
Sbjct: 103 LHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAG 162

Query: 438 IKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEE 497
             G   PL  A          + V         P+  + NG                   
Sbjct: 163 KNGLT-PLHVAVHHNNL----DIVKLLLPRGGSPHSPAWNG------------------- 198

Query: 498 TQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQ 554
              T L +A     ++VA  LL+ G +    +    TPL  AAQEGH E+V  LL   A 
Sbjct: 199 --YTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQAN 256

Query: 555 VHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAKGGHANVVQLL 609
            +   ++G T L    + GH  VAD+L+ +G  +D       T L  A+  G+  +V+ L
Sbjct: 257 GNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFL 316

Query: 610 LDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHA 664
           L     V+AKT+ G + L  A + GHTD+  LLL  GA+      D +T L  A + G+ 
Sbjct: 317 LQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYI 376

Query: 665 NVVQLL 670
           +V  +L
Sbjct: 377 SVTDVL 382

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  175 bits (443), Expect = 9e-49
 Identities = 110/427 (25%), Positives = 169/427 (39%), Gaps = 46/427 (10%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           L  A   G +  VK LL  G S + +  + E+ L +A  AG+ E+A+ LL   A V  + 
Sbjct: 4   LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA 63

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
              + TPL  AA  G                     +++   L E  A           P
Sbjct: 64  KDDQ-TPLHCAARIGH--------------------TNMVKLLLENNANPNLATTAGHTP 102

Query: 122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 181
            +      A  +G V+TV  LL +  S    T +G + L +A   G   +A++LL   A+
Sbjct: 103 LH-----IAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAH 157

Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV 241
               G  G   PL  A     ++IV+LL+  G   +  + +G TPL  A       V R 
Sbjct: 158 PNAAGKNGLT-PLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARS 216

Query: 242 LLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKG 301
           LL+ G +    +  G TPL  AA  GH  +  +LL   A  N   N+   + L L   +G
Sbjct: 217 LLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGN-LGNKSGLTPLHLVAQEG 275

Query: 302 HLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPN 361
           H+ +   L+  G   +  T   +T L  AS  G+++                 +      
Sbjct: 276 HVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIK---------------LVKFLLQHQ 320

Query: 362 DKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYE 421
                 + + Y+    L QA   G    V  LL  G S +E + +G + L++A   GY  
Sbjct: 321 ADVNAKTKLGYS---PLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYIS 377

Query: 422 LAQVLLA 428
           +  VL  
Sbjct: 378 VTDVLKV 384

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  165 bits (419), Expect = 2e-45
 Identities = 102/380 (26%), Positives = 155/380 (40%), Gaps = 49/380 (12%)

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 437
           L  A   G +  VK LL  G S + +  + E+ L +A  AG+ E+A+ LL   A V  + 
Sbjct: 4   LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA 63

Query: 438 IKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIP---------G 488
              + TPL  AA  G    +   +   A  +            A+               
Sbjct: 64  KDDQ-TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 122

Query: 489 AKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELV 545
           A     T+    T L +A   G + VA+ LL+  A+         TPL  A    +L++V
Sbjct: 123 ASQACMTK-KGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIV 181

Query: 546 RYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA-----NLDNSTMLIEAAKG 600
           + LL  G   H+    G T L  A +    +VA  LL YG      ++   T L  AA+ 
Sbjct: 182 KLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQE 241

Query: 601 GHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTML 655
           GHA +V LLL    + +   ++G T L    + GH  VAD+L+ +G  +D       T L
Sbjct: 242 GHAEMVALLLSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPL 301

Query: 656 IEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTY 715
             A+  G+  +V+                              ++ V+AKT+ G + L  
Sbjct: 302 HVASHYGNIKLVK-------------------------FLLQHQADVNAKTKLGYSPLHQ 336

Query: 716 ACENGHTDVADLLLSYGANL 735
           A + GHTD+  LLL  GA+ 
Sbjct: 337 AAQQGHTDIVTLLLKNGASP 356

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  162 bits (410), Expect = 2e-44
 Identities = 104/471 (22%), Positives = 163/471 (34%), Gaps = 118/471 (25%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L  A   G +  VK LL  G S + +  + E+ L +A  AG+ E+A+ LL   A V  + 
Sbjct: 4   LHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKA 63

Query: 187 IKGECTPLMEAASSGFIEIVRLLINH---------------------------------G 213
              + TPL  AA  G   +V+LL+ +                                  
Sbjct: 64  KDDQ-TPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKE 122

Query: 214 ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAK 273
           A     +  G TPL  A   G   V  +LLE  A+     +NG TPL  A    ++ + K
Sbjct: 123 ASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVK 182

Query: 274 ILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMD 333
           +LL  G   ++ +     + L +A  +  +++ R LL  G     ++ +  T L  A+ +
Sbjct: 183 LLLPRGGSPHSPAWN-GYTPLHIAAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQE 241

Query: 334 GHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKL 393
           GH E+                                                   V  L
Sbjct: 242 GHAEM---------------------------------------------------VALL 250

Query: 394 LTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGR 453
           L++  + +     G + L L    G+  +A VL+     V D   +   TPL  A+  G 
Sbjct: 251 LSKQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMV-DATTRMGYTPLHVASHYGN 309

Query: 454 QCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLD 513
                  V    +H    N K+  G                      + L  A   G  D
Sbjct: 310 IKL----VKFLLQHQADVNAKTKLG---------------------YSPLHQAAQQGHTD 344

Query: 514 VADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYL---LDSGAQVHAK 558
           +   LLKNGA+    +S   TPL  A + G++ +   L    D  + V   
Sbjct: 345 IVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKVVTDETSFVLVS 395

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  122 bits (306), Expect = 1e-30
 Identities = 65/218 (29%), Positives = 92/218 (42%), Gaps = 35/218 (16%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-- 588
           TPL  A+  GHL +V+ LL  GA  +      +T L  A   GHT+VA  LL   A +  
Sbjct: 2   TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNA 61

Query: 589 ---DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
              D+ T L  AA+ GH N+V+LLL+   + +  T  G T L  A   GH +    LL  
Sbjct: 62  KAKDDQTPLHCAARIGHTNMVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEK 121

Query: 646 GANLDNST-----MLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKS 700
            A+    T      L  AAK G   V +LLL+                         + +
Sbjct: 122 EASQACMTKKGFTPLHVAAKYGKVRVAELLLE-------------------------RDA 156

Query: 701 GVHAKTQTGDTALTYACENGHTDVADLLLSYGANLRNR 738
             +A  + G T L  A  + + D+  LLL  G +  + 
Sbjct: 157 HPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSP 194

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]} Length = 408

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  103 bits (256), Expect = 4e-24
 Identities = 62/260 (23%), Positives = 95/260 (36%), Gaps = 14/260 (5%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           L  A   G V+  + LL      +     G + L +A      ++ ++LL    +     
Sbjct: 136 LHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPA 195

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAA----AALTRMRNE 117
             G  TPL    ++   ++      L         +      L  AA    A +  +   
Sbjct: 196 WNG-YTPLHI--AAKQNQVEVARSLLQYGGSANAESVQGVTPLHLAAQEGHAEMVALLLS 252

Query: 118 NPRPQNERS------LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYEL 171
                N  +      L     +G V     L+  G  V  TT  G + L +A   G  +L
Sbjct: 253 KQANGNLGNKSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKL 312

Query: 172 AQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYAC 231
            + LL   A+V  +   G  +PL +AA  G  +IV LL+ +GA  N  SS G TPL  A 
Sbjct: 313 VKFLLQHQADVNAKTKLG-YSPLHQAAQQGHTDIVTLLLKNGASPNEVSSDGTTPLAIAK 371

Query: 232 AGGHEAVVRVLLECGANVED 251
             G+ +V  VL         
Sbjct: 372 RLGYISVTDVLKVVTDETSF 391

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  130 bits (328), Expect = 8e-34
 Identities = 46/265 (17%), Positives = 82/265 (30%), Gaps = 25/265 (9%)

Query: 180 ANVEDRGIKGECTPLMEAASSG---FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE 236
           ++   +GIK E      AA +G    ++ + LL+     V    +        A   GH 
Sbjct: 81  SDAHKKGIKSE-VICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHL 139

Query: 237 AVVRVLLECGA--NVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTH--SNEFKES 292
            V+  L E      +       +     AA  GH+ V   L E      T     E   +
Sbjct: 140 HVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEATAMIQAENYYA 199

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA 352
               A  +GH +++ FLL            +  A +     G   V   +     +    
Sbjct: 200 FRWAAVGRGHHNVINFLLDCPVM-------LAYAEIHEFEYGEKYVNPFIARHVNRLKEM 252

Query: 353 -----YARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEG-----RSVHE 402
                 +  D   +   +      +   R+L++   +  +  ++ LL+            
Sbjct: 253 HDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTAT 312

Query: 403 TTDEGESLLSLACSAGYYELAQVLL 427
              +   LL LA   G      +LL
Sbjct: 313 IPGDANELLRLALRLGNQGACALLL 337

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  123 bits (309), Expect = 2e-31
 Identities = 53/439 (12%), Positives = 101/439 (23%), Gaps = 117/439 (26%)

Query: 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGA 214
           E +  L L     +  L Q  ++ +          E   +    +    ++ +LL  + A
Sbjct: 11  ENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLYYA 70

Query: 215 DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKI 274
             N                      R   +  ++              AA  G       
Sbjct: 71  HYN----------------------RNAKQLWSDAHKKGIKSEVICFVAAITGCSSA--- 105

Query: 275 LLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDG 334
                                       LD +  LL++    +    E + A   A+ +G
Sbjct: 106 ----------------------------LDTLCLLLTSDEIVKVIQAENYQAFRLAAENG 137

Query: 335 HVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLL 394
           H+ V   L +     + A                 I      +   A  +G +  + +L 
Sbjct: 138 HLHVLNRLCELAPTEIMA----------------MIQAENYHAFRLAAENGHLHVLNRLC 181

Query: 395 TEGRSV---HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS 451
               +        +   +    A   G++ +   LL     +            +     
Sbjct: 182 ELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA--------YAEIHEFEY 233

Query: 452 GRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGF 511
           G                             +  +                A  L+   G 
Sbjct: 234 GE-------------------------KYVNPFIARHVNRLKEMH----DAFKLSNPDGV 264

Query: 512 LDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGA-----QVHAKTQTGDTAL 566
            D+     K+           L+    E  L+ +R+LL                  +  L
Sbjct: 265 FDLVT---KSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELL 321

Query: 567 TYACENGHTDVADLLLSYG 585
             A   G+     LLLS  
Sbjct: 322 RLALRLGNQGACALLLSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  121 bits (304), Expect = 1e-30
 Identities = 50/310 (16%), Positives = 82/310 (26%), Gaps = 58/310 (18%)

Query: 431 ANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAK 490
           ++   +GIK E      AA +G    L                 ++  L     L     
Sbjct: 81  SDAHKKGIKSE-VICFVAAITGCSSAL----------------DTLCLL-----LTSDEI 118

Query: 491 INAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA-----STPLMEAAQEGHLELV 545
           +     E    A  LA   G L V + L +      +             AA+ GHL ++
Sbjct: 119 VKVIQAE-NYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVL 177

Query: 546 RYLLDSGAQV---HAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGH 602
             L +          + +        A   GH +V + LL     L      I   + G 
Sbjct: 178 NRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA--YAEIHEFEYGE 235

Query: 603 ANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGG 662
             V   +         + +    A   +  +G  D+                LI      
Sbjct: 236 KYVNPFIAR----HVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGFYML-RNLIRRNDEV 290

Query: 663 HANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHT 722
             + ++ LL  P        ++   D                     +  L  A   G+ 
Sbjct: 291 LLDDIRFLLSIPGIKALAPTATIPGD--------------------ANELLRLALRLGNQ 330

Query: 723 DVADLLLSYG 732
               LLLS  
Sbjct: 331 GACALLLSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  118 bits (296), Expect = 1e-29
 Identities = 51/375 (13%), Positives = 93/375 (24%), Gaps = 48/375 (12%)

Query: 282 INTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMH-TALMEASMDGHVEVAK 340
           I+   N   +  L L  +    ++ +  +SA               +         +V +
Sbjct: 4   IHNIENYENDPQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQ 63

Query: 341 LLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGD---VKTVKKLLTEG 397
           LL    A       +     + K  +   I          A   G    + T+  LLT  
Sbjct: 64  LLCLYYAHYNRNAKQLWSDAHKKGIKSEVI-------CFVAAITGCSSALDTLCLLLTSD 116

Query: 398 RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGE-CTPLMEAASSGRQCN 456
             V     E      LA   G+  +   L  +        I+ E       AA    +  
Sbjct: 117 EIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAA----ENG 172

Query: 457 LNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVAD 516
               ++             +                    E        A   G  +V +
Sbjct: 173 HLHVLNRLCELAPTEATAMIQA------------------ENYYAFRWAAVGRGHHNVIN 214

Query: 517 FLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTD 576
           FLL     +    +   +   + G   +  ++         + +    A   +  +G  D
Sbjct: 215 FLLDCPVML----AYAEIHEFEYGEKYVNPFIARHVN----RLKEMHDAFKLSNPDGVFD 266

Query: 577 VADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFP-----RSVHAKTQTGDTALTYAC 631
           +                LI        + ++ LL  P               +  L  A 
Sbjct: 267 LVTKSECLQGFYML-RNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLAL 325

Query: 632 ENGHTDVADLLLSYG 646
             G+     LLLS  
Sbjct: 326 RLGNQGACALLLSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score =  109 bits (274), Expect = 9e-27
 Identities = 44/261 (16%), Positives = 65/261 (24%), Gaps = 31/261 (11%)

Query: 501 TALTLACCGGFLDVADFLLKNGANIELGA--------------STPLMEAAQEGH---LE 543
             + L        V   L    A+    A                    AA  G    L+
Sbjct: 48  IHIFLPGTKNMEQVRQLLCLYYAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALD 107

Query: 544 LVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-------NSTMLIE 596
            +  LL S   V         A   A ENGH  V + L               N      
Sbjct: 108 TLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRL 167

Query: 597 AAKGGHANVVQLLLDF---PRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNST 653
           AA+ GH +V+  L +      +   + +        A   GH +V + LL     L    
Sbjct: 168 AAENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLA--Y 225

Query: 654 MLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTAL 713
             I   + G   V   +      +     +    +         K   +          L
Sbjct: 226 AEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGVFDLVTKSECLQGF--YMLRNL 283

Query: 714 TYACENGHTDVADLLLSYGAN 734
               +    D    LLS    
Sbjct: 284 IRRNDEVLLDDIRFLLSIPGI 304

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 87.3 bits (215), Expect = 4e-19
 Identities = 38/287 (13%), Positives = 64/287 (22%), Gaps = 49/287 (17%)

Query: 2   LVQACSDGD---VKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 58
              A   G    + T+  LLT    V     E      LA   G+  +   L  +     
Sbjct: 94  CFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEI 153

Query: 59  DRGIKGE-CTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNE 117
              I+ E       AA +G                       ++   + A    T M   
Sbjct: 154 MAMIQAENYHAFRLAAENGH-------------------LHVLNRLCELAPTEATAMIQA 194

Query: 118 NPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLA 177
                       A   G    +  LL     +                 G   +   +  
Sbjct: 195 E---NYYAFRWAAVGRGHHNVINFLLDCPVMLAYA-------EIHEFEYGEKYVNPFIAR 244

Query: 178 MHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA 237
               +++            +   G  ++V            Q       L+         
Sbjct: 245 HVNRLKE-----MHDAFKLSNPDGVFDLV------TKSECLQGFYMLRNLIRRNDEVLLD 293

Query: 238 VVRVLLECGA-----NVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
            +R LL                + +  L  A   G+ G   +LL   
Sbjct: 294 DIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSIP 340

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]} Length = 346

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

 Score = 75.7 bits (185), Expect = 3e-15
 Identities = 30/216 (13%), Positives = 50/216 (23%), Gaps = 49/216 (22%)

Query: 531 TPLMEAAQEGHLELVRYLL-DSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 589
             L          L ++ +  +   +   +      +          V  LL  Y     
Sbjct: 14  PQLRLIPWILWENLFQHFISANELSLMTLSYKEAIHIFLPGTKNMEQVRQLLCLY----- 68

Query: 590 NSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVAD---LLLSYG 646
                       +A+  +         H K    +     A   G +   D   LLL+  
Sbjct: 69  ------------YAHYNRNAKQLWSDAHKKGIKSEVICFVAAITGCSSALDTLCLLLTSD 116

Query: 647 ANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSG 701
             +     +N      AA+ GH +V+  L                               
Sbjct: 117 EIVKVIQAENYQAFRLAAENGHLHVLNRLC-----------------------ELAPTEI 153

Query: 702 VHAKTQTGDTALTYACENGHTDVADLLLSYGANLRN 737
           +         A   A ENGH  V + L         
Sbjct: 154 MAMIQAENYHAFRLAAENGHLHVLNRLCELAPTEAT 189

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  128 bits (321), Expect = 2e-33
 Identities = 78/305 (25%), Positives = 118/305 (38%), Gaps = 41/305 (13%)

Query: 30  EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLAD 89
           E   LL  A      +L Q LL   ANV  +  +G  TPL  A                 
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS------------R 51

Query: 90  PEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSV 149
            +++  L                       +       + A   G VK +K  L++G  V
Sbjct: 52  EDIVELLLR-------------HGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADV 98

Query: 150 HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGEC---------TPLMEAASS 200
           +E    G +    A   G  +  + L    ANV  R    E          T LM+AA  
Sbjct: 99  NECDFYGFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEK 158

Query: 201 GFIEIVRLLINH-GADVNGQSSSGNTPLMYACAGG----HEAVVRVLLECGANVEDHNEN 255
           G +E++++L++  GADVN   + G   L++A         EA+  +LL+ GA+V    E 
Sbjct: 159 GHVEVLKILLDEMGADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGER 218

Query: 256 GHTPLMEAASAGHVGVAKILLE-YGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
           G TPL+ A    H+G+ + LLE     IN  ++   ++AL LA       +   L   GA
Sbjct: 219 GKTPLILAVEKKHLGLVQRLLEQEHIEIN-DTDSDGKTALLLAVELKLKKIAELLCKRGA 277

Query: 315 DQEHK 319
             +  
Sbjct: 278 STDCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  120 bits (300), Expect = 1e-30
 Identities = 76/277 (27%), Positives = 113/277 (40%), Gaps = 32/277 (11%)

Query: 406 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYA 465
           E   LL  A      +L Q LL   ANV  +  +G  TPL  A    R+  +   +   A
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 466 RHDFFPNDKSVNGLQASVILIPGAKINAHTEETQE--------TALTLACCGGFLDVADF 517
                  + +   L A++           ++            TA   A   G +    F
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123

Query: 518 LLKNGANIE-------------LGASTPLMEAAQEGHLELVRYLLDS-GAQVHAKTQTGD 563
           L K GAN+               G +T LM+AA++GH+E+++ LLD  GA V+A    G 
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183

Query: 564 TALTYACENG----HTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPR 614
            AL +A  +        +  LLL +GA++        T LI A +  H  +VQ LL+   
Sbjct: 184 NALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEH 243

Query: 615 -SVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
             ++     G TAL  A E     +A+LL   GA+ D
Sbjct: 244 IEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 1e-29
 Identities = 72/342 (21%), Positives = 119/342 (34%), Gaps = 72/342 (21%)

Query: 255 NGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA 314
             +  L++A     V + + LLE GA +N    E   + L  A      D+V  LL  GA
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 315 DQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTY 374
           D   +     T  + A++ G V                  +       K    +   +  
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSV------------------KLLKLFLSKGADVNECDFYG 105

Query: 375 SRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 434
             + ++A   G VK +K L   G +V+                                +
Sbjct: 106 FTAFMEAAVYGKVKALKFLYKRGANVNLRR------------------------KTKEDQ 141

Query: 435 DRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAH 494
           +R  KG  T LM+AA  G                   + + +  L    +   GA +NA 
Sbjct: 142 ERLRKGGATALMDAAEKG-------------------HVEVLKIL----LDEMGADVNAC 178

Query: 495 TEETQETALTLACCGG---FLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYL 548
               +   +             +   LL +GA++ +      TPL+ A ++ HL LV+ L
Sbjct: 179 DNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRL 238

Query: 549 LDS-GAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 589
           L+    +++     G TAL  A E     +A+LL   GA+ D
Sbjct: 239 LEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  116 bits (291), Expect = 1e-29
 Identities = 68/288 (23%), Positives = 116/288 (40%), Gaps = 22/288 (7%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDR 60
           L++A  + DV  V++LL  G +V+   +E G + L  A      ++ ++LL   A+   R
Sbjct: 9   LIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLR 68

Query: 61  GIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPR 120
              G    L+ A     G +      L+    +         A  EAA        +   
Sbjct: 69  KKNGATPFLLAA---IAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKFLY 125

Query: 121 PQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH- 179
            +     ++  +  D + ++K              G + L  A   G+ E+ ++LL    
Sbjct: 126 KRGANVNLRRKTKEDQERLRK-------------GGATALMDAAEKGHVEVLKILLDEMG 172

Query: 180 ANVEDRGIKGECTPLMEAASSG---FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE 236
           A+V      G    +    SS       I  LL++HGADVN +   G TPL+ A    H 
Sbjct: 173 ADVNACDNMGRNALIHALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHL 232

Query: 237 AVVRVLLE-CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGIN 283
            +V+ LLE     + D + +G T L+ A       +A++L + GA  +
Sbjct: 233 GLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTD 280

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  112 bits (281), Expect = 3e-28
 Identities = 81/299 (27%), Positives = 128/299 (42%), Gaps = 33/299 (11%)

Query: 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGA 214
           E   LL  A      +L Q LL   ANV  +  +G  TPL  A      +IV LL+ HGA
Sbjct: 4   EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGA 63

Query: 215 DVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKI 274
           D   +  +G TP + A   G   ++++ L  GA+V + +  G T  MEAA  G V   K 
Sbjct: 64  DPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKALKF 123

Query: 275 LLEYGAGINTHSNEFK---------ESALTLACYKGHLDMVRFLLS-AGADQEHKTDE-- 322
           L + GA +N      +          +AL  A  KGH+++++ LL   GAD     +   
Sbjct: 124 LYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGR 183

Query: 323 --MHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQ 380
             +  AL+ +       +  LLLD GA  V+        P                 L+ 
Sbjct: 184 NALIHALLSSDDSDVEAITHLLLDHGA-DVNVRGERGKTP-----------------LIL 225

Query: 381 ACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI 438
           A     +  V++LL  E   +++T  +G++ L LA      ++A++L    A+ +   +
Sbjct: 226 AVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCGDL 284

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  106 bits (266), Expect = 3e-26
 Identities = 73/345 (21%), Positives = 106/345 (30%), Gaps = 70/345 (20%)

Query: 220 SSSGNTPLMYACAGGHEAVVRVLLECGANVEDH-NENGHTPLMEAASAGHVGVAKILLEY 278
           +   N  L+ A       +V+ LLE GANV     E G TPL  A       + ++LL +
Sbjct: 2   AVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRH 61

Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEV 338
           GA               LA   G + +++  LS GAD         TA MEA++ G V+ 
Sbjct: 62  GADPVLRKKNGATPF-LLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120

Query: 339 AKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGR 398
            K L   GA         +                                         
Sbjct: 121 LKFLYKRGANVNLRRKTKED---------------------------------------- 140

Query: 399 SVHETTDEGESLLSLACSAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAASSGRQCNL 457
                   G + L  A   G+ E+ ++LL    A+V      G                 
Sbjct: 141 -QERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN--------------- 184

Query: 458 NESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADF 517
                    H    +D S       ++L  GA +N   E   +T L LA     L +   
Sbjct: 185 ------ALIHALLSSDDSDVEAITHLLLDHGADVNVRGER-GKTPLILAVEKKHLGLVQR 237

Query: 518 LL-KNGANIELGAS---TPLMEAAQEGHLELVRYLLDSGAQVHAK 558
           LL +    I    S   T L+ A +    ++   L   GA     
Sbjct: 238 LLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.8 bits (154), Expect = 1e-11
 Identities = 36/175 (20%), Positives = 64/175 (36%), Gaps = 25/175 (14%)

Query: 586 ANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKT-QTGDTALTYACENGHTDVADLLLS 644
           A ++++ +LI+A +    ++VQ LL+   +V+ +  + G T L  A +    D+ +LLL 
Sbjct: 1   AAVEDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLR 60

Query: 645 YGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVH- 703
           +GA+               A    + L       G  ++       +          V  
Sbjct: 61  HGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECDFYGFTAFMEAAVYGKVKA 120

Query: 704 ----------------------AKTQTGDTALTYACENGHTDVADLLLS-YGANL 735
                                    + G TAL  A E GH +V  +LL   GA++
Sbjct: 121 LKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADV 175

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]} Length = 285

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.3 bits (93), Expect = 5e-04
 Identities = 14/62 (22%), Positives = 31/62 (50%), Gaps = 1/62 (1%)

Query: 2   LVQACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 60
           L+ A     +  V++LL  E   +++T  +G++ L LA      ++A++L    A+ +  
Sbjct: 223 LILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVELKLKKIAELLCKRGASTDCG 282

Query: 61  GI 62
            +
Sbjct: 283 DL 284

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score =  121 bits (304), Expect = 7e-32
 Identities = 66/219 (30%), Positives = 107/219 (48%), Gaps = 4/219 (1%)

Query: 127 LVQACSDGDVKTVKKLLTEGRS-VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 185
           +      G ++ +K+ +   +S    T  +  + L  ACSAG+ E+ + LL +   V D+
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 186 GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245
              G   PL  AAS+G  EIV+ L+  GA VN  + +G TPL YA +     +  +LLE 
Sbjct: 67  DDAGWS-PLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 125

Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDM 305
           GAN +  +    T +  AA+ G++ +  ILL Y A  N   +    + L LAC +  ++ 
Sbjct: 126 GANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKASTN-IQDTEGNTPLHLACDEERVEE 184

Query: 306 VRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344
            + L+S GA    +  E  T L  A   G   + K +++
Sbjct: 185 AKLLVSQGASIYIENKEEKTPLQVAK-GGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 93.5 bits (231), Expect = 4e-22
 Identities = 64/202 (31%), Positives = 102/202 (50%), Gaps = 15/202 (7%)

Query: 484 ILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEG 540
           IL   +     T++   TAL  AC  G  ++ +FLL+ G  +        +PL  AA  G
Sbjct: 23  ILADKSLATR-TDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGWSPLHIAASAG 81

Query: 541 HLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLI 595
             E+V+ LL  GAQV+A  Q G T L YA      ++A +LL  GAN D      +T + 
Sbjct: 82  RDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMH 141

Query: 596 EAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-----D 650
            AA  G+  ++ +LL +  S + +   G+T L  AC+    + A LL+S GA++     +
Sbjct: 142 RAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKE 201

Query: 651 NSTMLIEAAKGGHANVVQLLLD 672
             T L + AKGG   +++ +++
Sbjct: 202 EKTPL-QVAKGGLGLILKRMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 88.1 bits (217), Expect = 3e-20
 Identities = 54/244 (22%), Positives = 96/244 (39%), Gaps = 27/244 (11%)

Query: 34  LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVL 93
           ++     +G  E  +  +    ++  R  +   T L  A S+G  ++     +       
Sbjct: 6   MVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQ------- 58

Query: 94  RRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETT 153
                               +   +        L  A S G  + VK LL +G  V+   
Sbjct: 59  ------------------LGVPVNDKDDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVN 100

Query: 154 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG 213
             G + L  A S   +E+A +LL   AN + +      T +  AA+ G ++++ +L+ + 
Sbjct: 101 QNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYE-ATAMHRAAAKGNLKMIHILLYYK 159

Query: 214 ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAK 273
           A  N Q + GNTPL  AC        ++L+  GA++   N+   TPL   A  G   + K
Sbjct: 160 ASTNIQDTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQ-VAKGGLGLILK 218

Query: 274 ILLE 277
            ++E
Sbjct: 219 RMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.8 bits (211), Expect = 2e-19
 Identities = 49/244 (20%), Positives = 90/244 (36%), Gaps = 29/244 (11%)

Query: 2   LVQACSDGDVKTVKKLLTEGRS-VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 60
           +      G ++ +K+ +   +S    T  +  + L  ACSAG+ E+ + LL +   V D+
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 61  GIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPR 120
              G     + A                           +  AL    A +  +      
Sbjct: 67  DDAGWSPLHIAA---------------------SAGRDEIVKALLGKGAQVNAVNQNGCT 105

Query: 121 PQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 180
           P     L  A S    +    LL  G +         + +  A + G  ++  +LL   A
Sbjct: 106 P-----LHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKA 160

Query: 181 NVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR 240
           +   +  +G  TPL  A     +E  +LL++ GA +  ++    TPL  A  GG   +++
Sbjct: 161 STNIQDTEG-NTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILK 218

Query: 241 VLLE 244
            ++E
Sbjct: 219 RMVE 222

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.0 bits (209), Expect = 3e-19
 Identities = 56/214 (26%), Positives = 91/214 (42%), Gaps = 36/214 (16%)

Query: 533 LMEAAQEGHLELVRYLLDS-GAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN- 590
           +   A  G LE ++  + +  +      Q   TAL +AC  GHT++ + LL  G  +++ 
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 591 ----STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
                + L  AA  G   +V+ LL     V+A  Q G T L YA      ++A +LL  G
Sbjct: 67  DDAGWSPLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGG 126

Query: 647 ANLD-----NSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSG 701
           AN D      +T +  AA  G+  ++ +LL +  S                         
Sbjct: 127 ANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAST------------------------ 162

Query: 702 VHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
            + +   G+T L  AC+    + A LL+S GA++
Sbjct: 163 -NIQDTEGNTPLHLACDEERVEEAKLLVSQGASI 195

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.5 bits (174), Expect = 1e-14
 Identities = 52/218 (23%), Positives = 94/218 (43%), Gaps = 16/218 (7%)

Query: 378 LVQACSDGDVKTVKKLLTEGRS-VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 436
           +      G ++ +K+ +   +S    T  +  + L  ACSAG+ E+ + LL +   V D+
Sbjct: 7   VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDK 66

Query: 437 GIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDK--------SVNGLQASVILI-P 487
              G   PL  AAS+GR   +   +   A+ +    +         S N  + +V+L+  
Sbjct: 67  DDAGWS-PLHIAASAGRDEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEG 125

Query: 488 GAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLEL 544
           GA  +A     + TA+  A   G L +   LL   A+  +  +   TPL  A  E  +E 
Sbjct: 126 GANPDAKDHY-EATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEE 184

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLL 582
            + L+  GA ++ + +   T L  A + G   +   ++
Sbjct: 185 AKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMV 221

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]} Length = 223

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 61.9 bits (149), Expect = 2e-11
 Identities = 59/297 (19%), Positives = 99/297 (33%), Gaps = 81/297 (27%)

Query: 257 HTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQ 316
           +  +   A +G +   K  +     + T +++   +AL  AC  GH ++V FLL  G   
Sbjct: 4   NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPV 63

Query: 317 EHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSR 376
             K D   + L  A+  G  E+ K LL  GAQ                            
Sbjct: 64  NDKDDAGWSPLHIAASAGRDEIVKALLGKGAQ---------------------------- 95

Query: 377 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 436
                                  V+     G + L  A S   +E+A +LL   AN + +
Sbjct: 96  -----------------------VNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAK 132

Query: 437 GIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTE 496
                 T +  AA+ G    ++                         IL+         +
Sbjct: 133 DHYE-ATAMHRAAAKGNLKMIH-------------------------ILLYYKASTNIQD 166

Query: 497 ETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRYLLD 550
               T L LAC    ++ A  L+  GA+I +      TPL   A+ G   +++ +++
Sbjct: 167 TEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQ-VAKGGLGLILKRMVE 222

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score =  100 bits (250), Expect = 2e-24
 Identities = 47/239 (19%), Positives = 73/239 (30%), Gaps = 18/239 (7%)

Query: 127 LVQACSDGDVKTVKKLLTEG---RSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 183
           L  A        +  LL        +    D G++ L LA   G     + L A  A V 
Sbjct: 13  LHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVL 72

Query: 184 DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTP--------------LMY 229
                G       A          +L+         +S                    + 
Sbjct: 73  VAERGGHTAL-HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVD 131

Query: 230 ACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEF 289
           +             +    +E  N +GHTPL  A       + ++L + GA +N      
Sbjct: 132 SQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTC 191

Query: 290 KESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQ 348
             + L LA       ++  LL AGAD   +     T L  A +  +  +A+LL   GA 
Sbjct: 192 GRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 99.0 bits (245), Expect = 1e-23
 Identities = 56/273 (20%), Positives = 88/273 (32%), Gaps = 50/273 (18%)

Query: 404 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGE--CTPLMEAASSGRQCNLNESV 461
           T++G++ L LA    +      LL   A  E   ++ +   T L  AA  G    + +  
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 462 SAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKN 521
           +A A                                       LAC       A  LL+ 
Sbjct: 66  AAGAGVLVAERGGHTAL-------------------------HLACRVRAHTCACVLLQP 100

Query: 522 GANIELGASTPLMEAAQE-----------------GHLELVRYLLDSGAQVHAKTQTGDT 564
             +    AS   +  +Q+                    E      D   Q+ A+   G T
Sbjct: 101 RPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHT 160

Query: 565 ALTYACENGHTDVADLLLSYGANLDN------STMLIEAAKGGHANVVQLLLDFPRSVHA 618
            L  A  +   ++  LL   GA+L+        T L  A +   A+V++LLL       A
Sbjct: 161 PLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTA 220

Query: 619 KTQTGDTALTYACENGHTDVADLLLSYGANLDN 651
           +   G T L  A    +  +A LL ++GA    
Sbjct: 221 RMYGGRTPLGSALLRPNPILARLLRAHGAPEPE 253

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 98.6 bits (244), Expect = 1e-23
 Identities = 49/246 (19%), Positives = 85/246 (34%), Gaps = 28/246 (11%)

Query: 28  TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGE--CTPLMEAASSG--------- 76
           T++G++ L LA    +      LL   A  E   ++ +   T L  AA  G         
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 77  ---------------FGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRP 121
                             LA          VL  L    S   D +   LT+ ++  P  
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVL--LQPRPSHPRDASDTYLTQSQDCTPDT 123

Query: 122 QNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHAN 181
            +  + V +  + + +   +       +     +G + L +A      E+ ++L    A+
Sbjct: 124 SHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGAD 183

Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV 241
           +         TPL  A  +    ++ LL+  GAD   +   G TPL  A    +  + R+
Sbjct: 184 LNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARL 243

Query: 242 LLECGA 247
           L   GA
Sbjct: 244 LRAHGA 249

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 97.1 bits (240), Expect = 4e-23
 Identities = 41/239 (17%), Positives = 59/239 (24%), Gaps = 34/239 (14%)

Query: 223 GNTPLMYACAGGHEAVVRVLLECGANVED---HNENGHTPLMEAASAGHVGVAKILLEYG 279
           G+T L  A    HE  +  LL   A  E     N+ G T L  AA  G     + L   G
Sbjct: 9   GDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAG 68

Query: 280 AGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDE--------------MHT 325
           AG+         +   LAC          LL           +                 
Sbjct: 69  AGVLVAERGGHTAL-HLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAP 127

Query: 326 ALMEASMDGHVEVAKLLLDSGA----------------QSVSAYARHDFFPNDKCERPSS 369
           A +++  +   E      D                                +   +    
Sbjct: 128 AAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKP 187

Query: 370 ISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLA 428
                   L  A        ++ LL  G         G + L  A       LA++L A
Sbjct: 188 EPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRA 246

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 93.6 bits (231), Expect = 7e-22
 Identities = 60/274 (21%), Positives = 89/274 (32%), Gaps = 56/274 (20%)

Query: 491 INAHTEETQETALTLACCGGFLDVADFLLKNGANIEL------GASTPLMEAAQEGHLEL 544
           +  +  E  +TAL LA         DFLL   A  E          T L  AA  G    
Sbjct: 1   VFGYVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEAST 60

Query: 545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN-------------- 590
           V  L  +GA V    + G TAL  AC       A +LL    +                 
Sbjct: 61  VEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDTYLTQSQDCT 120

Query: 591 -----STMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSY 645
                +   +++             D+   + A+   G T L  A  +   ++  LL   
Sbjct: 121 PDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDA 180

Query: 646 GANLDN------STMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKK 699
           GA+L+        T L  A +   A+V++LLL                            
Sbjct: 181 GADLNKPEPTCGRTPLHLAVEAQAASVLELLLK-------------------------AG 215

Query: 700 SGVHAKTQTGDTALTYACENGHTDVADLLLSYGA 733
           +   A+   G T L  A    +  +A LL ++GA
Sbjct: 216 ADPTARMYGGRTPLGSALLRPNPILARLLRAHGA 249

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 92.8 bits (229), Expect = 1e-21
 Identities = 49/303 (16%), Positives = 74/303 (24%), Gaps = 62/303 (20%)

Query: 291 ESALTLACYKGHLDMVRFLLSAGADQEH---KTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           ++AL LA    H   + FLL   A  E+   + D   TAL  A++ G             
Sbjct: 10  DTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEA----------- 58

Query: 348 QSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEG 407
                                        +L  AC          LL    S      + 
Sbjct: 59  -------STVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRDASDT 111

Query: 408 ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARH 467
               S  C+                          T    AA   +    NE        
Sbjct: 112 YLTQSQDCT------------------------PDTSHAPAAVDSQPNPENEEEPRDEDW 147

Query: 468 DFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIEL 527
                 ++ +G     + +               A                         
Sbjct: 148 RLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTC---------------- 191

Query: 528 GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
              TPL  A +     ++  LL +GA   A+   G T L  A    +  +A LL ++GA 
Sbjct: 192 -GRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARLLRAHGAP 250

Query: 588 LDN 590
              
Sbjct: 251 EPE 253

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 91.7 bits (226), Expect = 3e-21
 Identities = 55/307 (17%), Positives = 75/307 (24%), Gaps = 67/307 (21%)

Query: 253 NENGHTPLMEAASAGHVGVAKILLEYGAGINT--HSNEFKESALTLACYKGHLDMVRFLL 310
            E+G T L  A    H      LL + AG       N+  ++AL LA   G    V  L 
Sbjct: 6   TEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLY 65

Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSI 370
           +AGA         HTAL  A        A +LL                           
Sbjct: 66  AAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRP----------------------- 102

Query: 371 SYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 430
                                  LT+ +     T    + +  +      E         
Sbjct: 103 -------------SHPRDASDTYLTQSQDCTPDTSHAPAAVD-SQPNPENEEEPRDEDWR 148

Query: 431 ANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAK 490
             +E     G     +       +       +    +   P                   
Sbjct: 149 LQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTC----------------- 191

Query: 491 INAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRY 547
                     T L LA       V + LLK GA+         TPL  A    +  L R 
Sbjct: 192 --------GRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNPILARL 243

Query: 548 LLDSGAQ 554
           L   GA 
Sbjct: 244 LRAHGAP 250

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 75.9 bits (185), Expect = 7e-16
 Identities = 34/213 (15%), Positives = 59/213 (27%), Gaps = 13/213 (6%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGA---QVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
           T L  A    H   + +LL   A    +  +   G TAL  A   G     + L + GA 
Sbjct: 11  TALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAG 70

Query: 588 LDNSTMLIE-----AAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
           +  +          A +        +LL    S                ++   D +   
Sbjct: 71  VLVAERGGHTALHLACRVRAHTCACVLLQPRPSHPRD---ASDTYLTQSQDCTPDTSHAP 127

Query: 643 LSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGV 702
            +  +  +         +     +     D    +    +   ++     L         
Sbjct: 128 AAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMV--RLLRDAGADLN 185

Query: 703 HAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
             +   G T L  A E     V +LLL  GA+ 
Sbjct: 186 KPEPTCGRTPLHLAVEAQAASVLELLLKAGADP 218

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]} Length = 255

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 42.0 bits (97), Expect = 1e-04
 Identities = 12/30 (40%), Positives = 15/30 (50%)

Query: 705 KTQTGDTALTYACENGHTDVADLLLSYGAN 734
            T+ GDTAL  A  + H    D LL + A 
Sbjct: 5   VTEDGDTALHLAVIHQHEPFLDFLLGFSAG 34

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 95.6 bits (236), Expect = 3e-22
 Identities = 61/279 (21%), Positives = 103/279 (36%), Gaps = 35/279 (12%)

Query: 91  EVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVH 150
           E L+R   S      +    + + +    +  +    + ACS GD + V +LL  G  ++
Sbjct: 12  EQLKRWIGS----ETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADIN 67

Query: 151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLI 210
               +G + L  AC     ++    L  +    ++       PL  AAS G+++I   LI
Sbjct: 68  YANVDGLTALHQACIDDNVDM-VKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLI 126

Query: 211 NHGADVNGQSSSGNTPLMY---------------------------ACAGGHEAVVRVLL 243
           + GA V   +S G+TPL                                       + L 
Sbjct: 127 SQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLN 186

Query: 244 ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHL 303
               N   H ++G T L  AA+ G+  V K+L++    +N    +   + L  A + G  
Sbjct: 187 SGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD-GWTPLHAAAHWGKE 245

Query: 304 DMVRFLLSAGADQEHKTDEMHTALMEASMD--GHVEVAK 340
           +  R L+    D E       TA   A  D  G++E  +
Sbjct: 246 EACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQ 284

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 93.6 bits (231), Expect = 1e-21
 Identities = 58/293 (19%), Positives = 100/293 (34%), Gaps = 53/293 (18%)

Query: 292 SALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVS 351
           +    AC  G  + V  LL  GAD  +   +  TAL +A +D +V++             
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDM------------- 88

Query: 352 AYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL 411
                  F  +     +         L  A S G +   + L+++G  V     EG++ L
Sbjct: 89  -----VKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPL 143

Query: 412 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFP 471
            +A      EL Q  +       +   K E   ++                         
Sbjct: 144 DIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLR------------------------ 179

Query: 472 NDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS- 530
                    A   L  G   +    ++  TAL +A   G+ +V   L++   ++ +    
Sbjct: 180 --------DARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIKDYD 231

Query: 531 --TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLL 581
             TPL  AA  G  E  R L+++   + A  + G TA   A E+    + +L 
Sbjct: 232 GWTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVADEDILGYLEELQ 284

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 92.9 bits (229), Expect = 2e-21
 Identities = 51/273 (18%), Positives = 86/273 (31%), Gaps = 6/273 (2%)

Query: 12  KTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLME 71
           +T  +     R   +   +  ++   ACS+G  E    LL   A++    + G  T L +
Sbjct: 21  ETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDG-LTALHQ 79

Query: 72  AASSGFGKLAT-GDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQA 130
           A       +        A+             A              +          + 
Sbjct: 80  ACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEG 139

Query: 131 CSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGE 190
            +  D+   + +    ++                       A+  L      + R  K  
Sbjct: 140 DTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSG 199

Query: 191 CTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
            T L  AA+ G+ E+++LLI    DVN +   G TPL  A   G E   R+L+E   ++E
Sbjct: 200 GTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME 259

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGIN 283
             N+ G T    A       +   L E     N
Sbjct: 260 AVNKVGQTAFDVADE----DILGYLEELQKKQN 288

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 91.7 bits (226), Expect = 6e-21
 Identities = 52/245 (21%), Positives = 91/245 (37%), Gaps = 8/245 (3%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
            + ACS GD + V +LL  G  ++    +G + L  AC     ++    L  +    ++ 
Sbjct: 44  FLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDM-VKFLVENGANINQP 102

Query: 62  IKGECTPLMEAASSGFGKLATGDGKLADPEVLR--RLTSSVSCALDEAAAALTRMRNENP 119
                 PL  AAS G+  +A                  + +  A +EA   L +      
Sbjct: 103 DNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQ 162

Query: 120 RPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH 179
               E +  +          + L +   +       G + L +A + GY E+ ++L+   
Sbjct: 163 GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQAR 222

Query: 180 ANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVV 239
            +V  +   G  TPL  AA  G  E  R+L+ +  D+   +  G T    A     E ++
Sbjct: 223 YDVNIKDYDG-WTPLHAAAHWGKEEACRILVENLCDMEAVNKVGQTAFDVAD----EDIL 277

Query: 240 RVLLE 244
             L E
Sbjct: 278 GYLEE 282

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 87.9 bits (216), Expect = 1e-19
 Identities = 58/263 (22%), Positives = 98/263 (37%), Gaps = 26/263 (9%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
              + A SSG  E V  L+  GAD+N  +  G T L  AC   +  +V+ L+E GAN+  
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQ 101

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
            +  G  PL  AAS G++ +A+ L+  GA +   ++E                +   +  
Sbjct: 102 PDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSIS 371
            G D E    E    ++  +           L+SG  +   +A+                
Sbjct: 162 QGVDIEAARKEEERIMLRDARQW--------LNSGHINDVRHAKSGGTA----------- 202

Query: 372 YTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHA 431
                 L  A + G  + +K L+     V+    +G + L  A   G  E  ++L+    
Sbjct: 203 ------LHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLC 256

Query: 432 NVEDRGIKGECTPLMEAASSGRQ 454
           ++E     G+ T    A      
Sbjct: 257 DMEAVNKVGQ-TAFDVADEDILG 278

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 84.4 bits (207), Expect = 1e-18
 Identities = 41/228 (17%), Positives = 76/228 (33%), Gaps = 12/228 (5%)

Query: 520 KNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVAD 579
           +    ++       + A   G  E V  LL+ GA ++     G TAL  AC + + D+  
Sbjct: 31  RKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVK 90

Query: 580 LLLSYGANLDNSTMLIEAAK-----GGHANVVQLLLDFPRSVHAKTQTGDTALTYACENG 634
            L+  GAN++                G+ ++ + L+     V A    GDT L  A E  
Sbjct: 91  FLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEA 150

Query: 635 HTDVADLLLS-YGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSP------SD 687
             ++    ++  G +++ +    E      A                S  +         
Sbjct: 151 MEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKG 210

Query: 688 DSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
            +         +  V+ K   G T L  A   G  +   +L+    ++
Sbjct: 211 YTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDM 258

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 80.1 bits (196), Expect = 5e-17
 Identities = 46/265 (17%), Positives = 87/265 (32%), Gaps = 11/265 (4%)

Query: 388 KTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLME 447
           +T  +     R   +   +  ++   ACS+G  E    LL   A++    + G  T L +
Sbjct: 21  ETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDG-LTALHQ 79

Query: 448 AASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLAC 507
           A        +   V   A  +   N+  +    A+            ++     A+    
Sbjct: 80  ACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEG 139

Query: 508 CGGFLDVA-----DFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTG 562
                        + L        +       E  +    +  ++L           ++G
Sbjct: 140 DTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSG 199

Query: 563 DTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVH 617
            TAL  A   G+T+V  LL+    ++     D  T L  AA  G     ++L++    + 
Sbjct: 200 GTALHVAAAKGYTEVLKLLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDME 259

Query: 618 AKTQTGDTALTYACENGHTDVADLL 642
           A  + G TA   A E+    + +L 
Sbjct: 260 AVNKVGQTAFDVADEDILGYLEELQ 284

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 72.1 bits (175), Expect = 3e-14
 Identities = 53/280 (18%), Positives = 89/280 (31%), Gaps = 73/280 (26%)

Query: 501 TALTLACCGGFLDVADFLLKNGANIELGAS---TPLMEAAQEGHLELVRY---------- 547
                AC  G  +    LL+ GA+I        T L +A  + ++++V++          
Sbjct: 42  AVFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQ 101

Query: 548 -----------------------LLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSY 584
                                  L+  GA V A    GDT L  A E    ++    ++ 
Sbjct: 102 PDNEGWIPLHAAASCGYLDIAEYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNR 161

Query: 585 GANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLS 644
              +D      E  +    +  Q L     +     ++G TAL  A   G+T+V  LL+ 
Sbjct: 162 Q-GVDIEAARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQ 220

Query: 645 YGANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKK 699
              ++     D  T L  AA  G     ++L++                           
Sbjct: 221 ARYDVNIKDYDGWTPLHAAAHWGKEEACRILVE-------------------------NL 255

Query: 700 SGVHAKTQTGDTALTYACENGHTDVADLLLSYGA--NLRN 737
             + A  + G TA   A E+    +   L       NL +
Sbjct: 256 CDMEAVNKVGQTAFDVADED----ILGYLEELQKKQNLLH 291

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]} Length = 291

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

 Score = 57.4 bits (137), Expect = 2e-09
 Identities = 46/223 (20%), Positives = 87/223 (39%), Gaps = 20/223 (8%)

Query: 533 LMEAAQEGHLELVRYL-----LDSGAQVHAKTQT---GDTALTYACENGHTDVADLLLSY 584
           + +A Q+ + +L R++     L+       KT+           AC +G T+    LL  
Sbjct: 3   MADAKQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLER 62

Query: 585 GANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVA 639
           GA++     D  T L +A    + ++V+ L++   +++     G   L  A   G+ D+A
Sbjct: 63  GADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGWIPLHAAASCGYLDIA 122

Query: 640 DLLLSYG-----ANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLC 694
           + L+S G      N +  T L  A +     ++Q  ++     I  +             
Sbjct: 123 EYLISQGAHVGAVNSEGDTPLDIAEEEAMEELLQNEVNRQGVDIEAARKEEERIMLRDAR 182

Query: 695 SQGKKSG--VHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
                         ++G TAL  A   G+T+V  LL+    ++
Sbjct: 183 QWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDV 225

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 92.0 bits (227), Expect = 5e-21
 Identities = 33/252 (13%), Positives = 72/252 (28%), Gaps = 20/252 (7%)

Query: 116 NENPRPQNERSLVQACSDGDVKTVKKLLTEGRSV-HETTDEGESLLSLACSAGYYELAQV 174
           +   + + E  L +       +    L  +  +   E     +    ++  +   E+   
Sbjct: 32  DNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDA 91

Query: 175 LLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGG 234
                 N+     +   TPL    S   +E+V+ L+ HG++     + G + L+ A    
Sbjct: 92  FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSV 151

Query: 235 HEAVVRVLLEC----GANVEDHNENGHTPLMEAASAGHVG------------VAKILLEY 278
           +                 +   +    T L        +             +   +++ 
Sbjct: 152 NNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKK 211

Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFLLS---AGADQEHKTDEMHTALMEASMDGH 335
                      KES       +    ++  L            +     T L  A+  G+
Sbjct: 212 QNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGN 271

Query: 336 VEVAKLLLDSGA 347
           + +   LLD GA
Sbjct: 272 ISIVDALLDYGA 283

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 80.1 bits (196), Expect = 5e-17
 Identities = 38/282 (13%), Positives = 81/282 (28%), Gaps = 36/282 (12%)

Query: 458 NESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADF 517
              + A+ +   FP  + +     +      +  N+    + +    ++      +V D 
Sbjct: 36  KMKLEAFLQRLLFPEIQEMPTSLNN----DSSNRNSEGGSSNQQQQHVSFDSLLQEVNDA 91

Query: 518 LLKNGANIELGA----STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENG 573
                 N+ +      +TPL       +LELV++L+  G+        G++ L  A ++ 
Sbjct: 92  FPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSV 151

Query: 574 HTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACEN 633
           +                                 LL      +  +     T L +    
Sbjct: 152 NNYD------------------------SGTFEALLDYLYPCLILEDSMNRTILHHIIIT 187

Query: 634 GHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHL 693
                        A      ++    K  +  +     +        +         +  
Sbjct: 188 SGMTGCSAA----AKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLD 243

Query: 694 CSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 735
                 + ++A+   GDT L  A   G+  + D LL YGA+ 
Sbjct: 244 LKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADP 285

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 76.2 bits (186), Expect = 1e-15
 Identities = 40/340 (11%), Positives = 89/340 (26%), Gaps = 67/340 (19%)

Query: 237 AVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTL 296
            +++ L     N  +        L          +   L    +  N+      +    +
Sbjct: 20  KIMKALPSPVVNDNEQKMKLEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHV 79

Query: 297 ACYKGHLDMVRFLLSAGADQEHKTDEM-HTALMEASMDGHVEVAKLLLDSGAQSVSAYAR 355
           +      ++     +   +     DE  +T L   +   ++E+ K L+  G+        
Sbjct: 80  SFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGS-------- 131

Query: 356 HDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLAC 415
                        ++  +     V++ ++ D  T + LL                     
Sbjct: 132 -------NRLYGDNMGESCLVKAVKSVNNYDSGTFEALLD-------------------- 164

Query: 416 SAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKS 475
                      L     +ED       T L     +      + +             K 
Sbjct: 165 ----------YLYPCLILED---SMNRTILHHIIITSGMTGCSAAA------------KY 199

Query: 476 VNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKN---GANIELGAS-- 530
              +    I+    +        +E+            + + L         +    S  
Sbjct: 200 YLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNG 259

Query: 531 -TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYA 569
            T L  AA+ G++ +V  LLD GA      ++G   + + 
Sbjct: 260 DTCLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 75.5 bits (184), Expect = 2e-15
 Identities = 37/234 (15%), Positives = 74/234 (31%), Gaps = 30/234 (12%)

Query: 447 EAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAK--INAHTEETQETALT 504
           E  +S    + N +    + +    +    + LQ      P  +  +N   +E   T L 
Sbjct: 53  EMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIPVDEHGNTPLH 112

Query: 505 LACCGGFLDVADFLLKNGANIELG----------ASTPLMEAAQEGHLELVRYLLDSGAQ 554
                  L++   L+K+G+N   G          A   +          L+ YL      
Sbjct: 113 WLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLIL 172

Query: 555 VHAKTQTGDTAL---------TYACENGHTDVADLLLSYGANLDNS------TMLIEAAK 599
             +  +T    +         + A +     +   ++        S      +   +   
Sbjct: 173 EDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNG 232

Query: 600 GGHANVVQLLL---DFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD 650
               ++++ L         ++A+   GDT L  A   G+  + D LL YGA+  
Sbjct: 233 ERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF 286

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.8 bits (177), Expect = 1e-14
 Identities = 28/187 (14%), Positives = 60/187 (32%), Gaps = 20/187 (10%)

Query: 130 ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGY------YELAQVLLAMHANVE 183
             S  +++ VK L+  G +     + GES L  A  +        +E     L     +E
Sbjct: 114 LTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVKSVNNYDSGTFEALLDYLYPCLILE 173

Query: 184 DRGIKGECTPLMEAASSGFIEIV----------RLLINHGADVNGQSSSGNTPLMYACAG 233
           D   +     ++  +                   ++      +   ++   +        
Sbjct: 174 DSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGE 233

Query: 234 GHEAVVRVLL---ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFK 290
             ++++  L         +   + NG T L  AA  G++ +   LL+YGA     +N+  
Sbjct: 234 RKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDALLDYGADPF-IANKSG 292

Query: 291 ESALTLA 297
              +   
Sbjct: 293 LRPVDFG 299

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 72.8 bits (177), Expect = 1e-14
 Identities = 33/279 (11%), Positives = 74/279 (26%), Gaps = 37/279 (13%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSV-HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 60
           L +       +    L  +  +   E     +    ++  +   E+         N+   
Sbjct: 43  LQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLNLNIP 102

Query: 61  GIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPR 120
             +   TPL    S              + E+++ L             +     +    
Sbjct: 103 VDEHGNTPLHWLTSIA------------NLELVKHLVK---------HGSNRLYGDNMGE 141

Query: 121 PQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQV------ 174
               +++    +         L      +        ++L                    
Sbjct: 142 SCLVKAVKSVNNYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYL 201

Query: 175 ------LLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH---GADVNGQSSSGNT 225
                 ++         G   + +   +        I+  L         +N Q S+G+T
Sbjct: 202 DILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDT 261

Query: 226 PLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAA 264
            L  A   G+ ++V  LL+ GA+    N++G  P+   A
Sbjct: 262 CLNIAARLGNISIVDALLDYGADPFIANKSGLRPVDFGA 300

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 66.2 bits (160), Expect = 2e-12
 Identities = 29/188 (15%), Positives = 57/188 (30%), Gaps = 9/188 (4%)

Query: 405 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAY 464
           + G + L    S    EL + L+   +N    G     + L++A  S    +     +  
Sbjct: 105 EHGNTPLHWLTSIANLELVKHLVKHGSNR-LYGDNMGESCLVKAVKSVNNYDSGTFEALL 163

Query: 465 ARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGAN 524
                    +          +I  + +   +   +     L    G++            
Sbjct: 164 DYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYY---LDILMGWIVKKQNRPIQSGT 220

Query: 525 IELGASTPLMEAAQEGHLELVRYLL---DSGAQVHAKTQTGDTALTYACENGHTDVADLL 581
                 +   +   E    ++  L         ++A+   GDT L  A   G+  + D L
Sbjct: 221 N--EKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNISIVDAL 278

Query: 582 LSYGANLD 589
           L YGA+  
Sbjct: 279 LDYGADPF 286

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 301

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 60.8 bits (146), Expect = 1e-10
 Identities = 34/267 (12%), Positives = 77/267 (28%), Gaps = 16/267 (5%)

Query: 374 YSRSLVQACSDGDVKTVKKLLTEGRSV-HETTDEGESLLSLACSAGYYELAQVLLAMHAN 432
               L +       +    L  +  +   E     +    ++  +   E+         N
Sbjct: 39  LEAFLQRLLFPEIQEMPTSLNNDSSNRNSEGGSSNQQQQHVSFDSLLQEVNDAFPNTQLN 98

Query: 433 VEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKIN 492
           +     +   TPL    S      +   V   +   +  N      ++A         +N
Sbjct: 99  LNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGESCLVKAVK------SVN 152

Query: 493 AHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSG 552
            +   T E  L        L+ +         I     T    AA+     L+ +++   
Sbjct: 153 NYDSGTFEALLDYLYPCLILEDSMNRTILHHIIITSGMTGCSAAAKYYLDILMGWIVKKQ 212

Query: 553 AQ-VHAKTQTGDTALTYACENGHTDVADLLLSYGA--------NLDNSTMLIEAAKGGHA 603
            + + + T   ++            + + L             + +  T L  AA+ G+ 
Sbjct: 213 NRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIANMLNAQDSNGDTCLNIAARLGNI 272

Query: 604 NVVQLLLDFPRSVHAKTQTGDTALTYA 630
           ++V  LLD+        ++G   + + 
Sbjct: 273 SIVDALLDYGADPFIANKSGLRPVDFG 299

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 91.3 bits (225), Expect = 6e-21
 Identities = 52/299 (17%), Positives = 90/299 (30%), Gaps = 28/299 (9%)

Query: 291 ESALTLAC-YKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQS 349
           ES + L     G   +   +     +         T L   + +   E ++ L+   A+ 
Sbjct: 1   ESPIKLHTEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKE 59

Query: 350 VSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGES 409
             A        +     P          L+ A      + V  L+  G           S
Sbjct: 60  CIAAGADVNAMDCDENTP----------LMLAVLARRRRLVAYLMKAGADPTIYNKSERS 109

Query: 410 LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDF 469
            L  A +   + +   +L       D                         + A+     
Sbjct: 110 ALHQAAANRDFGMMVYMLNSTKLKGDIEELDRN------------GMTALMIVAHNEGRD 157

Query: 470 FPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA 529
                 +   + + +   GA      +    TAL  A     + +  +L+    + +   
Sbjct: 158 QVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQ 217

Query: 530 S----TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSY 584
                TP+M AAQEG +E+V YL+  GA V A   T  TA   A  N H ++ D+    
Sbjct: 218 DEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC 276

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 90.2 bits (222), Expect = 1e-20
 Identities = 40/271 (14%), Positives = 87/271 (32%), Gaps = 15/271 (5%)

Query: 192 TPLM-EAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL------- 243
           +P+     ++G   I   +     ++        T L +  +         L+       
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNII-DPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 244 -ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGH 302
              GA+V   + + +TPLM A  A    +   L++ GA    ++   + +    A     
Sbjct: 61  IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQ-AAANRD 119

Query: 303 LDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPND 362
             M+ ++L++   +    +     +    +  H E    +  +                 
Sbjct: 120 FGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAAR 179

Query: 363 KCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYEL 422
           K         T      Q  +   VK +     +G +  +  ++G++ + LA   G  E+
Sbjct: 180 KDSEKYK-GRTALHYAAQVSNMPIVKYLVG--EKGSNKDKQDEDGKTPIMLAAQEGRIEV 236

Query: 423 AQVLLAMHANVEDRGIKGECTPLMEAASSGR 453
              L+   A+VE        T    A ++  
Sbjct: 237 VMYLIQQGASVEAVDATDH-TARQLAQANNH 266

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 88.3 bits (217), Expect = 6e-20
 Identities = 51/327 (15%), Positives = 96/327 (29%), Gaps = 68/327 (20%)

Query: 32  ESLLSLACSA-GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADP 90
           ES + L   A G Y + + +     N+ D   +   T L   AS+               
Sbjct: 1   ESPIKLHTEAAGSYAITEPITRESVNIIDP--RHNRTVLHWIASNS------------SA 46

Query: 91  EVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVH 150
           E    L                                           K+ +  G  V+
Sbjct: 47  EKSEDLIV--------------------------------------HEAKECIAAGADVN 68

Query: 151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLI 210
               +  + L LA  A    L   L+   A+              +AA++    ++  ++
Sbjct: 69  AMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSAL-HQAAANRDFGMMVYML 127

Query: 211 NHGADVNGQ--------------SSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENG 256
           N                      + +     + +     E   +V  +  A  +     G
Sbjct: 128 NSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKG 187

Query: 257 HTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQ 316
            T L  AA   ++ + K L+          +E  ++ + LA  +G +++V +L+  GA  
Sbjct: 188 RTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGASV 247

Query: 317 EHKTDEMHTALMEASMDGHVEVAKLLL 343
           E      HTA   A  + H  +  +  
Sbjct: 248 EAVDATDHTARQLAQANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 85.6 bits (210), Expect = 6e-19
 Identities = 47/271 (17%), Positives = 78/271 (28%), Gaps = 31/271 (11%)

Query: 5   ACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL--------AMHAN 56
                    + + +T             ++L    S    E ++ L+        A  A+
Sbjct: 7   HTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGAD 66

Query: 57  VEDRGIKGECTPLMEAASSGF---------------------GKLATGDGKLADPEVLRR 95
           V         TPLM A  +                                  D  ++  
Sbjct: 67  VNAMDCDE-NTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVY 125

Query: 96  LTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSD-GDVKTVKKLLTEGRSVHETTD 154
           + +S     D        M        NE     A +     K  K              
Sbjct: 126 MLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKY 185

Query: 155 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGA 214
           +G + L  A       + + L+    + +D+  +   TP+M AA  G IE+V  LI  GA
Sbjct: 186 KGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYLIQQGA 245

Query: 215 DVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245
            V    ++ +T    A A  H  +V +   C
Sbjct: 246 SVEAVDATDHTARQLAQANNHHNIVDIFDRC 276

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 81.7 bits (200), Expect = 1e-17
 Identities = 52/247 (21%), Positives = 91/247 (36%), Gaps = 58/247 (23%)

Query: 157 ESLLSLACSA-GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH--- 212
           ES + L   A G Y + + +     N+ D   +   T L   AS+   E    LI H   
Sbjct: 1   ESPIKLHTEAAGSYAITEPITRESVNIIDP--RHNRTVLHWIASNSSAEKSEDLIVHEAK 58

Query: 213 -----GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAG 267
                GADVN      NTPLM A       +V  L++ GA+   +N++  + L +AA+  
Sbjct: 59  ECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANR 118

Query: 268 HVGVAKILLEYGAGINTHSNEFK------------------------------------- 290
             G+   +L             +                                     
Sbjct: 119 DFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAA 178

Query: 291 ---------ESALTLACYKGHLDMVRFLLS-AGADQEHKTDEMHTALMEASMDGHVEVAK 340
                     +AL  A    ++ +V++L+   G++++ + ++  T +M A+ +G +EV  
Sbjct: 179 RKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVM 238

Query: 341 LLLDSGA 347
            L+  GA
Sbjct: 239 YLIQQGA 245

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 80.9 bits (198), Expect = 2e-17
 Identities = 45/301 (14%), Positives = 79/301 (26%), Gaps = 94/301 (31%)

Query: 500 ETALTLAC-CGGFLDVADFLLKNGANI--ELGASTPLMEAAQEGHLELVRYLLD------ 550
           E+ + L     G   + + + +   NI       T L   A     E    L+       
Sbjct: 1   ESPIKLHTEAAGSYAITEPITRESVNIIDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 551 --SGAQVHAKTQTGDTALTYACEN---------------------------------GHT 575
             +GA V+A     +T L  A                                       
Sbjct: 61  IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120

Query: 576 DVADLLLSYG-------------------ANLDNSTMLIEAAKGGHANVVQLLLDFPRSV 616
            +   +L+                        +     + +AK       ++  D     
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180

Query: 617 HAKTQTGDTALTYACENGHTDVADLLLSYGA------NLDNSTMLIEAAKGGHANVVQLL 670
            ++   G TAL YA +  +  +   L+          + D  T ++ AA+ G   VV  L
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 240

Query: 671 LDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLS 730
           +                          + + V A   T  TA   A  N H ++ D+   
Sbjct: 241 IQ-------------------------QGASVEAVDATDHTARQLAQANNHHNIVDIFDR 275

Query: 731 Y 731
            
Sbjct: 276 C 276

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 70.9 bits (172), Expect = 5e-14
 Identities = 57/293 (19%), Positives = 98/293 (33%), Gaps = 48/293 (16%)

Query: 408 ESLLSLACSA-GYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYAR 466
           ES + L   A G Y + + +     N+ D   +   T L   AS+       E       
Sbjct: 1   ESPIKLHTEAAGSYAITEPITRESVNIIDP--RHNRTVLHWIASNSSA----EKSEDLIV 54

Query: 467 HDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIE 526
           H+            A   +  GA +N   +  + T L LA       +  +L+K GA+  
Sbjct: 55  HE------------AKECIAAGADVN-AMDCDENTPLMLAVLARRRRLVAYLMKAGADPT 101

Query: 527 LGA---STPLMEAAQEGHLELVRYLLDSGAQV---HAKTQTGDTALTYACENGHTDVADL 580
           +      + L +AA      ++ Y+L+S           + G TAL     N   D    
Sbjct: 102 IYNKSERSALHQAAANRDFGMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVAS 161

Query: 581 LLSYG----------------ANLDNSTMLIEAAKGGHANVVQLL-LDFPRSVHAKTQTG 623
                                      T L  AA+  +  +V+ L  +   +   + + G
Sbjct: 162 AKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDG 221

Query: 624 DTALTYACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQLLL 671
            T +  A + G  +V   L+  GA++      + T    A    H N+V +  
Sbjct: 222 KTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFD 274

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]} Length = 277

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

 Score = 69.0 bits (167), Expect = 2e-13
 Identities = 36/247 (14%), Positives = 74/247 (29%), Gaps = 43/247 (17%)

Query: 531 TPLM-EAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSY----- 584
           +P+       G   +   +      +    +   T L +   N   + ++ L+ +     
Sbjct: 2   SPIKLHTEAAGSYAITEPITRESVNI-IDPRHNRTVLHWIASNSSAEKSEDLIVHEAKEC 60

Query: 585 ---GANL-----DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHT 636
              GA++     D +T L+ A       +V  L+          ++  +AL  A  N   
Sbjct: 61  IAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDF 120

Query: 637 DVADLLLSYG---------ANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSD 687
            +   +L+                + ++I A   G   V    L   +        +   
Sbjct: 121 GMMVYMLNSTKLKGDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARK 180

Query: 688 DSSSH-------------------LCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLL 728
           DS  +                        K S    + + G T +  A + G  +V   L
Sbjct: 181 DSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDKQDEDGKTPIMLAAQEGRIEVVMYL 240

Query: 729 LSYGANL 735
           +  GA++
Sbjct: 241 IQQGASV 247

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 88.3 bits (217), Expect = 2e-20
 Identities = 52/207 (25%), Positives = 89/207 (42%), Gaps = 2/207 (0%)

Query: 137 KTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM 195
           + +  LL +G  ++ T D+ GE+ L LA      + A+ LL   A+   +   G      
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 196 EAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNEN 255
             A+        LL N   ++N +   G TPL+ A     E +V  L+   A++   + +
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 256 GHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGAD 315
           G T L  AA+  +     ILL + A  +   ++  E+ L LA  +G  +  + LL   A+
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRD-AQDDKDETPLFLAAREGSYEASKALLDNFAN 181

Query: 316 QEHKTDEMHTALMEASMDGHVEVAKLL 342
           +E            AS   H ++ +LL
Sbjct: 182 REITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 76.0 bits (185), Expect = 3e-16
 Identities = 45/231 (19%), Positives = 74/231 (32%), Gaps = 25/231 (10%)

Query: 45  ELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCAL 104
           ++   LLA  A +     K   T L  AA                 +  +RL  +     
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFA------------RADAAKRLLDA----- 45

Query: 105 DEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLAC 164
                      N               +D        L     +++    +G + L LA 
Sbjct: 46  -------GADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAA 98

Query: 165 SAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGN 224
                 + + L+   A++      G  T L  AA+    E V +L+ H A+ + Q     
Sbjct: 99  RLAIEGMVEDLITADADINAADNSG-KTALHWAAAVNNTEAVNILLMHHANRDAQDDKDE 157

Query: 225 TPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
           TPL  A   G     + LL+  AN E  +     P   A+   H  + ++L
Sbjct: 158 TPLFLAAREGSYEASKALLDNFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 72.5 bits (176), Expect = 5e-15
 Identities = 50/207 (24%), Positives = 78/207 (37%), Gaps = 14/207 (6%)

Query: 388 KTVKKLLTEGRSVHETTDE-GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLM 446
           + +  LL +G  ++ T D+ GE+ L LA      + A+ LL   A+   +   G      
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 447 EAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPG---------AKINAHTEE 497
             A+           +     +   +D +   + A+ + I G         A INA    
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 498 TQETALTLACCGGFLDVADFLLKNGANIEL---GASTPLMEAAQEGHLELVRYLLDSGAQ 554
             +TAL  A      +  + LL + AN +       TPL  AA+EG  E  + LLD+ A 
Sbjct: 123 -GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFAN 181

Query: 555 VHAKTQTGDTALTYACENGHTDVADLL 581
                         A E  H D+  LL
Sbjct: 182 REITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 70.2 bits (170), Expect = 3e-14
 Identities = 52/251 (20%), Positives = 77/251 (30%), Gaps = 53/251 (21%)

Query: 204 EIVRLLINHGADVNGQS-SSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLME 262
           +++  L+  GA++N     +G T L  A         + LL+ GA+    +  G TPL  
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 263 AASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDE 322
           A +A  +GV +ILL   A           + L LA       MV  L++A AD     + 
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 323 MHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQAC 382
             TAL  A+   + E                       +   +       T         
Sbjct: 123 GKTALHWAAAVNNTE---------------AVNILLMHHANRDAQDDKDETP-------- 159

Query: 383 SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGEC 442
                                       L LA   G YE ++ LL   AN E        
Sbjct: 160 ----------------------------LFLAAREGSYEASKALLDNFANREITDHMDR- 190

Query: 443 TPLMEAASSGR 453
            P   A+    
Sbjct: 191 LPRDVASERLH 201

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 69.4 bits (168), Expect = 5e-14
 Identities = 54/230 (23%), Positives = 81/230 (35%), Gaps = 40/230 (17%)

Query: 514 VADFLLKNGANIELGA----STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYA 569
           V   LL  GA +         T L  AA+    +  + LLD+GA  +++  TG T L  A
Sbjct: 4   VISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHAA 63

Query: 570 CENGHTDVADL------LLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTG 623
                  V  +              D +T LI AA+     +V+ L+     ++A   +G
Sbjct: 64  VAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNSG 123

Query: 624 DTALTYACENGHTDVADLLLSYGANLDN-----STMLIEAAKGGHANVVQLLLDFPRSVI 678
            TAL +A    +T+  ++LL + AN D       T L  AA+ G     + LLD      
Sbjct: 124 KTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLD------ 177

Query: 679 GGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLL 728
                                +               A E  H D+  LL
Sbjct: 178 -------------------NFANREITDHMDRLPRDVASERLHHDIVRLL 208

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]} Length = 209

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

 Score = 65.2 bits (157), Expect = 2e-12
 Identities = 45/234 (19%), Positives = 62/234 (26%), Gaps = 40/234 (17%)

Query: 421 ELAQVLLAMHANVEDRGIKGECTPLMEAASSGR---------QCNLNESVSAYARHDFFP 471
           ++   LLA  A +     K   T L  AA   R               S     R     
Sbjct: 3   QVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGRTPLHA 62

Query: 472 NDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS- 530
              +       ++L   A           T L LA       + + L+   A+I    + 
Sbjct: 63  AVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLITADADINAADNS 122

Query: 531 --TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 588
             T L  AA   + E V  LL   A   A+    +T L  A   G  + +  LL   AN 
Sbjct: 123 GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFAN- 181

Query: 589 DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
                                                    A E  H D+  LL
Sbjct: 182 ---------------------------REITDHMDRLPRDVASERLHHDIVRLL 208

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.7 bits (210), Expect = 2e-19
 Identities = 51/249 (20%), Positives = 93/249 (37%), Gaps = 26/249 (10%)

Query: 29  DEGESLLSLACSAGYYELAQVLLAMH----ANVEDRGIKGECTPLMEAASSGFGKLATGD 84
           ++G++ L +A   G       L+ +       ++      + TPL  A  +         
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ-TPLHLAVITTLPS----- 54

Query: 85  GKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLT 144
                              L   A A     + + +     +            +     
Sbjct: 55  ----------------VVRLLVTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAP 98

Query: 145 EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIE 204
               +     +G + L +A +    E  Q+LL   A+++   IK   +PL+ A  +  + 
Sbjct: 99  GTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLS 158

Query: 205 IVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAA 264
           +V+LL+ HGA+VN Q  SG++ L  A   G   +VR L+  GA+    N +  TPLM A 
Sbjct: 159 MVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVAR 218

Query: 265 SAGHVGVAK 273
           S   + + +
Sbjct: 219 SRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 85.3 bits (209), Expect = 3e-19
 Identities = 47/222 (21%), Positives = 76/222 (34%), Gaps = 9/222 (4%)

Query: 127 LVQACSDGDVKTVKKLLTE----GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV 182
           L  A   G++  V +L+      GR +    +  ++ L LA           LL      
Sbjct: 7   LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAV-ITTLPSVVRLLVTAGAS 65

Query: 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSS----SGNTPLMYACAGGHEAV 238
                +   T    A        +R L++  A            G T L  A     +  
Sbjct: 66  PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQET 125

Query: 239 VRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLAC 298
           V++LLE GA+++  +       +  A   +      LL               SAL  A 
Sbjct: 126 VQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 185

Query: 299 YKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAK 340
            +G L +VR L+ +GAD   K     T LM A     +++ +
Sbjct: 186 GRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 84.5 bits (207), Expect = 4e-19
 Identities = 57/239 (23%), Positives = 88/239 (36%), Gaps = 27/239 (11%)

Query: 223 GNTPLMYACAGGHEAVVRVLL----ECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY 278
           G+TPL  A   G+   V  L+    + G  ++ +N    TPL  A       V ++L+  
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTA 62

Query: 279 GAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMH----TALMEASMDG 334
           GA         + +A   AC       +R LL + A      +  +    TAL  A    
Sbjct: 63  GASPMALDRHGQTAAHL-ACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTE 121

Query: 335 HVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLL 394
             E  +LLL+ GA   +   +    P                 L+ A  +  +  V+ LL
Sbjct: 122 CQETVQLLLERGADIDAVDIKSGRSP-----------------LIHAVENNSLSMVQLLL 164

Query: 395 TEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGR 453
             G +V+     G S L  A   G   L + L+   A+   +    + TPLM A S   
Sbjct: 165 QHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHND-TPLMVARSRRV 222

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 78.4 bits (191), Expect = 6e-17
 Identities = 47/198 (23%), Positives = 70/198 (35%), Gaps = 41/198 (20%)

Query: 191 CTPLMEAASSGFIEIVRLLIN----HGADVNGQSSSGNTPLMYACAG------------- 233
            TPL  A   G +  V  L+N     G +++  ++   TPL  A                
Sbjct: 4   DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 63

Query: 234 --------------------GHEAVVRVLLECGANVEDHNE----NGHTPLMEAASAGHV 269
                                    +R LL+  A      E    +G T L  A +    
Sbjct: 64  ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ 123

Query: 270 GVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALME 329
              ++LLE GA I+    +   S L  A     L MV+ LL  GA+   +     +AL  
Sbjct: 124 ETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHS 183

Query: 330 ASMDGHVEVAKLLLDSGA 347
           AS  G + + + L+ SGA
Sbjct: 184 ASGRGLLPLVRTLVRSGA 201

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 74.9 bits (182), Expect = 9e-16
 Identities = 49/254 (19%), Positives = 80/254 (31%), Gaps = 49/254 (19%)

Query: 405 DEGESLLSLACSAGYYELAQVLLAMH----ANVEDRGIKGECTPLMEAASSGRQCNLNES 460
           ++G++ L +A   G       L+ +       ++      + TPL  A  +     +   
Sbjct: 1   EDGDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQ-TPLHLAVITTLPSVVRLL 59

Query: 461 VSAYARHDFFPNDKSVNGLQASVI------------LIPGAKINAHTEETQETALTLACC 508
           V+A A               A                 PG            TAL +A  
Sbjct: 60  VTAGASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVN 119

Query: 509 GGFLDVADFLLKNGANIEL----GASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDT 564
               +    LL+ GA+I+        +PL+ A +   L +V+ LL  GA V+A+  +G +
Sbjct: 120 TECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSS 179

Query: 565 ALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGD 624
           AL  A   G   +   L+  GA+                               K    D
Sbjct: 180 ALHSASGRGLLPLVRTLVRSGAD----------------------------SSLKNCHND 211

Query: 625 TALTYACENGHTDV 638
           T L  A      D+
Sbjct: 212 TPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 71.4 bits (173), Expect = 1e-14
 Identities = 49/220 (22%), Positives = 77/220 (35%), Gaps = 21/220 (9%)

Query: 378 LVQACSDGDVKTVKKLLTE----GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV 433
           L  A   G++  V +L+      GR +    +  ++ L LA           LL      
Sbjct: 7   LHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAV-ITTLPSVVRLLVTAGAS 65

Query: 434 EDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGL-------------Q 480
                +   T    A        L   + + A        ++ +GL              
Sbjct: 66  PMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQET 125

Query: 481 ASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA---STPLMEAA 537
             ++L  GA I+A   ++  + L  A     L +   LL++GAN+       S+ L  A+
Sbjct: 126 VQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSAS 185

Query: 538 QEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDV 577
             G L LVR L+ SGA    K    DT L  A      D+
Sbjct: 186 GRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 67.2 bits (162), Expect = 5e-13
 Identities = 49/246 (19%), Positives = 69/246 (28%), Gaps = 77/246 (31%)

Query: 531 TPLMEAAQEGHLELVRYLLD----SGAQVHAKTQTGDTALTY------------------ 568
           TPL  A  +G+L  V  L++     G ++        T L                    
Sbjct: 5   TPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGA 64

Query: 569 ---------------ACENGHTDVADLLLSYGANL---------DNSTMLIEAAKGGHAN 604
                          ACE+        LL   A           D  T L  A       
Sbjct: 65  SPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQE 124

Query: 605 VVQLLLDFPRSVHAKTQTGDT-ALTYACENGHTDVADLLLSYGANL-----DNSTMLIEA 658
            VQLLL+    + A         L +A EN    +  LLL +GAN+       S+ L  A
Sbjct: 125 TVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSA 184

Query: 659 AKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACE 718
           +  G   +V+ L+                            +    K    DT L  A  
Sbjct: 185 SGRGLLPLVRTLVR-------------------------SGADSSLKNCHNDTPLMVARS 219

Query: 719 NGHTDV 724
               D+
Sbjct: 220 RRVIDI 225

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 66.4 bits (160), Expect = 9e-13
 Identities = 49/224 (21%), Positives = 78/224 (34%), Gaps = 55/224 (24%)

Query: 500 ETALTLACCGGFLDVADFLLK----NGANIELGAS---TPLMEAAQE------------- 539
           +T L +A   G L     L+      G  +++  +   TPL  A                
Sbjct: 4   DTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAG 63

Query: 540 --------------------GHLELVRYLLDSGAQVHAKTQT----GDTALTYACENGHT 575
                                    +R LLDS A      +     G TAL  A      
Sbjct: 64  ASPMALDRHGQTAAHLACEHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQ 123

Query: 576 DVADLLLSYGANL------DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTY 629
           +   LLL  GA++         + LI A +    ++VQLLL    +V+A+  +G +AL  
Sbjct: 124 ETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHS 183

Query: 630 ACENGHTDVADLLLSYGANL-----DNSTMLIEAAKGGHANVVQ 668
           A   G   +   L+  GA+       N T L+ A      ++++
Sbjct: 184 ASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR 227

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.7 bits (101), Expect = 3e-05
 Identities = 21/75 (28%), Positives = 32/75 (42%), Gaps = 1/75 (1%)

Query: 2   LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 61
           L+ A  +  +  V+ LL  G +V+     G S L  A   G   L + L+   A+   + 
Sbjct: 148 LIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASGRGLLPLVRTLVRSGADSSLKN 207

Query: 62  IKGECTPLMEAASSG 76
              + TPLM A S  
Sbjct: 208 CHND-TPLMVARSRR 221

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]} Length = 228

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.1 bits (84), Expect = 0.004
 Identities = 10/32 (31%), Positives = 13/32 (40%), Gaps = 4/32 (12%)

Query: 623 GDTALTYACENGHTDVADLLLSY----GANLD 650
           GDT L  A   G+      L++     G  LD
Sbjct: 3   GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELD 34

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 79.9 bits (195), Expect = 2e-17
 Identities = 40/201 (19%), Positives = 68/201 (33%), Gaps = 43/201 (21%)

Query: 191 CTPLMEAASSG----FIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
            + L  A         +E++R +    A +N Q++   TPL  A       +   LL  G
Sbjct: 3   DSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAG 62

Query: 247 ANVEDHNE---------------------------------------NGHTPLMEAASAG 267
            + E  +                                        NGHT L  A+  G
Sbjct: 63  CDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHG 122

Query: 268 HVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTAL 327
           ++G+ ++L+  GA +N        +AL LA    + D+V  LL  GAD    T + ++  
Sbjct: 123 YLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPY 182

Query: 328 MEASMDGHVEVAKLLLDSGAQ 348
                     + + L     +
Sbjct: 183 QLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.5 bits (168), Expect = 7e-14
 Identities = 42/214 (19%), Positives = 68/214 (31%), Gaps = 25/214 (11%)

Query: 406 EGESLLSLACSAGYY----ELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESV 461
           +G+S L LA          E+ + +    A +  +    + TPL  A  + +       +
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ-TPLHLAVITNQPEIAEALL 59

Query: 462 SAYARHDFFPNDKSVNGLQ--------------ASVILIPGAKINAHTEETQETALTLAC 507
            A    +      +                    S        I   T     T L LA 
Sbjct: 60  GAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLAS 119

Query: 508 CGGFLDVADFLLKNGANIELGAS----TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGD 563
             G+L + + L+  GA++         T L  A    + +LV  LL  GA V+  T  G 
Sbjct: 120 IHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGY 179

Query: 564 TALTYACENGHTDVADLLLSYGANLDNSTMLIEA 597
           +          T +   L       +N  ML E+
Sbjct: 180 SPYQLTWGRPSTRIQQQLGQLTL--ENLQMLPES 211

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 64.1 bits (154), Expect = 4e-12
 Identities = 40/223 (17%), Positives = 68/223 (30%), Gaps = 24/223 (10%)

Query: 30  EGESLLSLACSAGYY----ELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDG 85
           +G+S L LA          E+ + +    A +  +    + TPL  A  +          
Sbjct: 1   DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ-TPLHLAVITNQ-------- 51

Query: 86  KLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTE 145
                             L        R    N             S G +         
Sbjct: 52  -----------PEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHL 100

Query: 146 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEI 205
              +  T   G + L LA   GY  + ++L+++ A+V  +      T L  A      ++
Sbjct: 101 HSILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDL 160

Query: 206 VRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN 248
           V LL+  GADVN  +  G +P           + + L +    
Sbjct: 161 VSLLLKCGADVNRVTYQGYSPYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 63.4 bits (152), Expect = 7e-12
 Identities = 33/208 (15%), Positives = 62/208 (29%), Gaps = 12/208 (5%)

Query: 531 TPLMEAAQEGH----LELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA 586
           + L  A         +E++R +    A ++ +     T L  A      ++A+ LL  G 
Sbjct: 4   SFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGC 63

Query: 587 NLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
           + +                  L      +    T    + L     NGHT        + 
Sbjct: 64  DPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHT------CLHL 117

Query: 647 ANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKT 706
           A++     ++E      A+V        R+ +  ++   + D  S L   G    V+  T
Sbjct: 118 ASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGAD--VNRVT 175

Query: 707 QTGDTALTYACENGHTDVADLLLSYGAN 734
             G +          T +   L      
Sbjct: 176 YQGYSPYQLTWGRPSTRIQQQLGQLTLE 203

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]} Length = 221

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.9 bits (143), Expect = 1e-10
 Identities = 37/206 (17%), Positives = 71/206 (34%), Gaps = 11/206 (5%)

Query: 127 LVQACSDGDVKT----VKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV 182
           L  A    +       ++++  +   ++   +  ++ L LA      E+A+ LL    + 
Sbjct: 6   LHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDP 65

Query: 183 EDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS-----SSGNTPLMYACAGGHEA 237
           E R  +G     +         +  L  +               +G+T L  A   G+  
Sbjct: 66  ELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLHSILKATNYNGHTCLHLASIHGYLG 125

Query: 238 VVRVLLECGANV-EDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTL 296
           +V +L+  GA+V      NG T L  A    +  +  +LL+ GA +N        S   L
Sbjct: 126 IVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVN-RVTYQGYSPYQL 184

Query: 297 ACYKGHLDMVRFLLSAGADQEHKTDE 322
              +    + + L     +      E
Sbjct: 185 TWGRPSTRIQQQLGQLTLENLQMLPE 210

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 76.8 bits (187), Expect = 5e-17
 Identities = 48/151 (31%), Positives = 79/151 (52%), Gaps = 2/151 (1%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
             L+EAA +G  + VR+L+ +GA        G +PL  A   GH +   VLL  G + + 
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDA 62

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
             +   TPL  AAS GH  + ++LL++GA +N   +  K +AL  A    H ++V  L+ 
Sbjct: 63  RTKVDRTPLHMAASEGHANIVEVLLKHGADVNAK-DMLKMTALHWATEHNHQEVVELLIK 121

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVAKLL 342
            GAD   ++    TA   +  +G+ ++A++L
Sbjct: 122 YGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 66.0 bits (159), Expect = 2e-13
 Identities = 39/154 (25%), Positives = 67/154 (43%), Gaps = 39/154 (25%)

Query: 526 ELGASTPLMEAAQEGHLELVRYLLDSGAQVHAK--------------------------- 558
           +LG    L+EAA+ G  + VR L+ +GA                                
Sbjct: 1   DLG--KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGV 58

Query: 559 -----TQTGDTALTYACENGHTDVADLLLSYGANLDNSTM-----LIEAAKGGHANVVQL 608
                T+   T L  A   GH ++ ++LL +GA+++   M     L  A +  H  VV+L
Sbjct: 59  SRDARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVEL 118

Query: 609 LLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
           L+ +   VH +++   TA   + +NG+ D+A++L
Sbjct: 119 LIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.0 bits (151), Expect = 3e-12
 Identities = 48/151 (31%), Positives = 72/151 (47%), Gaps = 2/151 (1%)

Query: 125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED 184
           + L++A   G    V+ L+  G     T   G S L LA   G++   +VL        D
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVL-LRAGVSRD 61

Query: 185 RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
              K + TPL  AAS G   IV +L+ HGADVN +     T L +A    H+ VV +L++
Sbjct: 62  ARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIK 121

Query: 245 CGANVEDHNENGHTPLMEAASAGHVGVAKIL 275
            GA+V   ++   T    +   G+  +A+IL
Sbjct: 122 YGADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 52.2 bits (123), Expect = 2e-08
 Identities = 43/174 (24%), Positives = 75/174 (43%), Gaps = 34/174 (19%)

Query: 564 TALTYACENGHTDVADLLLSYGANLD----NSTMLIEAAKGGHANVVQLLLDFPRSVHAK 619
             L  A   G  D   +L++ GA        ++ L  AA+ GH +  ++LL    S  A+
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 620 TQTGDTALTYACENGHTDVADLLLSYGANLDNSTM-----LIEAAKGGHANVVQLLLDFP 674
           T+   T L  A   GH ++ ++LL +GA+++   M     L  A +  H  VV+LL+ + 
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 675 RSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLL 728
             V                         H +++   TA   + +NG+ D+A++L
Sbjct: 124 ADV-------------------------HTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.7 bits (114), Expect = 3e-07
 Identities = 25/149 (16%), Positives = 49/149 (32%), Gaps = 10/149 (6%)

Query: 443 TPLMEAASSG----------RQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKIN 492
             L+EAA +G                      +           +  +  +         
Sbjct: 4   KKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDAR 63

Query: 493 AHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSG 552
              + T             ++V      +    ++   T L  A +  H E+V  L+  G
Sbjct: 64  TKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYG 123

Query: 553 AQVHAKTQTGDTALTYACENGHTDVADLL 581
           A VH +++   TA   + +NG+ D+A++L
Sbjct: 124 ADVHTQSKFCKTAFDISIDNGNEDLAEIL 152

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]} Length = 153

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 46.0 bits (107), Expect = 2e-06
 Identities = 24/146 (16%), Positives = 51/146 (34%), Gaps = 15/146 (10%)

Query: 322 EMHTALMEASMDGHVEVAKLLLDSGA--------------QSVSAYARHDFFPNDKCERP 367
           ++   L+EA+  G  +  ++L+ +GA               +   +              
Sbjct: 1   DLGKKLLEAARAGQDDEVRILMANGAPFTTDWLGTSPLHLAAQYGHFSTTEVLLRAGVSR 60

Query: 368 SSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLL 427
            + +      L  A S+G    V+ LL  G  V+       + L  A    + E+ ++L+
Sbjct: 61  DARTKVDRTPLHMAASEGHANIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLI 120

Query: 428 AMHANVEDRGIKGECTPLMEAASSGR 453
              A+V  +    + T    +  +G 
Sbjct: 121 KYGADVHTQSKFCK-TAFDISIDNGN 145

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 75.6 bits (184), Expect = 6e-16
 Identities = 47/227 (20%), Positives = 90/227 (39%), Gaps = 9/227 (3%)

Query: 127 LVQACSDGDVKTVKKLLTEGRS-VHETTDEGESLLSLACSAGYYELAQVLLA----MHAN 181
           L QAC + +   V++LL    S + +   +G   L  + S   +E+   LL+    ++ +
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 63

Query: 182 VEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRV 241
                       +  +  +  +           D+N  ++ G T L  A       V + 
Sbjct: 64  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 123

Query: 242 LLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKG 301
           L+E GA+V   ++    PL  AAS G + + ++L   G       ++   + L  A  +G
Sbjct: 124 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 183

Query: 302 HLDMVRFLLSA-GADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGA 347
           H D    L+   GA+ +   ++   A   A    + +V K  L++  
Sbjct: 184 HGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVV 227

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.8 bits (174), Expect = 1e-14
 Identities = 44/256 (17%), Positives = 64/256 (25%), Gaps = 81/256 (31%)

Query: 531 TPLMEAAQEGHLELVRYLLDS-GAQVHAKTQTGDTALTYACENGHTDVADLLLSYG---- 585
            PL +A  E     V+ LL S  + +  K Q G   L ++      ++   LLS      
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 586 ---------------------------------------ANLDNSTMLIEAAKGGHANVV 606
                                                        T L  A       V 
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 607 QLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLSYG------ANLDNSTMLIEAAK 660
           Q L++   SV  K +     L  A   G   + +LL   G       +    T L  A  
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALA 181

Query: 661 GGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSG--VHAKTQTGDTALTYACE 718
            GH +   LL++                          K G         G  A   A  
Sbjct: 182 EGHGDAAVLLVE--------------------------KYGAEYDLVDNKGAKAEDVAL- 214

Query: 719 NGHTDVADLLLSYGAN 734
             +  V    L+   +
Sbjct: 215 --NEQVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 71.4 bits (173), Expect = 2e-14
 Identities = 35/247 (14%), Positives = 76/247 (30%), Gaps = 26/247 (10%)

Query: 192 TPLMEAASSGFIEIVR-LLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG---- 246
            PL +A        V+ LL +  + +  +   G  PL ++ +     +   LL       
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMV 306
            +    +       +  +      V  +                 + L LA  K   ++ 
Sbjct: 62  LDDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVS 121

Query: 307 RFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCER 366
           +FL+  GA    K       L  A+  G +++ +LL   G  +V+   +  + P      
Sbjct: 122 QFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHA-- 179

Query: 367 PSSISYTYSRSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQV 425
                           ++G       L+ + G       ++G     +A +    ++ + 
Sbjct: 180 ---------------LAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKF 221

Query: 426 LLAMHAN 432
            L    +
Sbjct: 222 FLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.8 bits (169), Expect = 6e-14
 Identities = 38/229 (16%), Positives = 68/229 (29%), Gaps = 19/229 (8%)

Query: 35  LSLACSAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVL 93
           L  AC    +   Q LL    + +  +   G   PL  + S    ++ +      +   L
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQDGR-IPLHWSVSFQAHEITSFLLSKMENVNL 62

Query: 94  RRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKK------------ 141
                         A ++  +                       T               
Sbjct: 63  DDYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQ 122

Query: 142 -LLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS 200
            L+  G SV       +  L  A S G  +L ++L  +  +  +   K   TPL  A + 
Sbjct: 123 FLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAE 182

Query: 201 GFIEIVRLLI-NHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN 248
           G  +   LL+  +GA+ +   + G      A    +E V +  L    +
Sbjct: 183 GHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 69.1 bits (167), Expect = 9e-14
 Identities = 36/228 (15%), Positives = 62/228 (27%), Gaps = 21/228 (9%)

Query: 378 LVQACSDGDVKTVKKLLTEGRS-VHETTDEGESLLSLAC------------SAGYYELAQ 424
           L QAC + +   V++LL    S + +   +G   L  +             S        
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLD 63

Query: 425 VLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVI 484
                                +  +   R    + +                   + S  
Sbjct: 64  DYPDDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQF 123

Query: 485 LIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGAS----TPLMEAAQEG 540
           LI         ++  +  L  A   G L + + L   G +          TPL  A  EG
Sbjct: 124 LIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEG 183

Query: 541 HLELVRYLLDS-GAQVHAKTQTGDTALTYACENGHTDVADLLLSYGAN 587
           H +    L++  GA+       G  A   A    +  V    L+   +
Sbjct: 184 HGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 67.2 bits (162), Expect = 4e-13
 Identities = 40/246 (16%), Positives = 68/246 (27%), Gaps = 29/246 (11%)

Query: 411 LSLACSAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDF 469
           L  AC    +   Q LL    + +  +   G   PL  + S       +  +S     + 
Sbjct: 4   LHQACMENEFFKVQELLHSKPSLLLQKDQDGR-IPLHWSVSFQAHEITSFLLSKMENVNL 62

Query: 470 FPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGA 529
                                 ++                        L  +   I    
Sbjct: 63  DDYP-----------------DDSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQG 105

Query: 530 STPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYG---- 585
            T L  A  +   E+ ++L+++GA V  K +     L  A   G   + +LL   G    
Sbjct: 106 VTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAV 165

Query: 586 --ANLDNSTMLIEAAKGGHANVVQLLLDFPR-SVHAKTQTGDTALTYACENGHTDVADLL 642
              +    T L  A   GH +   LL++            G  A   A    +  V    
Sbjct: 166 NWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVAL---NEQVKKFF 222

Query: 643 LSYGAN 648
           L+   +
Sbjct: 223 LNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 56.8 bits (135), Expect = 1e-09
 Identities = 37/267 (13%), Positives = 70/267 (26%), Gaps = 40/267 (14%)

Query: 258 TPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQE 317
            PL +A         + LL     +    ++     L  +      ++  FLLS   +  
Sbjct: 2   YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVN 61

Query: 318 HKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRS 377
                  +      +                  +       +        + I+      
Sbjct: 62  LDDYPDDSGWTPFHIACS-------------VGNLEVVKSLYDRPLKPDLNKITNQGVTC 108

Query: 378 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 437
           L  A      +  + L+  G SV       +  L  A S G  +L ++L  +  +  +  
Sbjct: 109 LHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLGKSAVNWQ 168

Query: 438 IKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEE 497
            K   TPL  A                       +  +   L    +   GA+ +    +
Sbjct: 169 DKQGWTPLFHAL-------------------AEGHGDAAVLL----VEKYGAEYDLVDNK 205

Query: 498 TQETALTLACCGGFLDVADFLLKNGAN 524
               A  +A       V  F L N  +
Sbjct: 206 -GAKAEDVALN---EQVKKFFLNNVVD 228

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 229

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 37.9 bits (86), Expect = 0.003
 Identities = 10/46 (21%), Positives = 14/46 (30%), Gaps = 6/46 (13%)

Query: 624 DTALTYACENGHTD-VADLLLSYGANL-----DNSTMLIEAAKGGH 663
           +  L  AC       V +LL S  + L     D    L  +     
Sbjct: 1   NYPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQA 46

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 72.4 bits (176), Expect = 8e-16
 Identities = 34/125 (27%), Positives = 59/125 (47%), Gaps = 2/125 (1%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
             L++++  G  ++V+ +I    D +  +  G T L  A   GH  +V+ L++ G NV  
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTL--ACYKGHLDMVRFL 309
            + +G TPL  AAS  +V V K L+E GA +   +    ++A        +G+    +FL
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 310 LSAGA 314
                
Sbjct: 123 YGVQE 127

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 60.8 bits (146), Expect = 9e-12
 Identities = 31/127 (24%), Positives = 54/127 (42%), Gaps = 8/127 (6%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDN 590
             L++++ EG  +LV+ ++            G TAL  A   GHT++   L+ +G N++ 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 591 -----STMLIEAAKGGHANVVQLLLDFPRSVHAKTQT-GDTA--LTYACENGHTDVADLL 642
                 T L  AA   +  V + L++   +V A T +   TA       E G+T  +  L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 643 LSYGANL 649
                 +
Sbjct: 123 YGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.2 bits (134), Expect = 4e-10
 Identities = 26/126 (20%), Positives = 48/126 (38%), Gaps = 4/126 (3%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L+ +  +G+   V++++ E        DEG + L  A  AG+ E+ + L+    NV    
Sbjct: 5   LLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAAD 64

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGN---TPLMYACAGGHEAVVRVLL 243
             G       AAS   +++ + L+  GA V   + S              G+    + L 
Sbjct: 65  SDGWTPL-HCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLY 123

Query: 244 ECGANV 249
                +
Sbjct: 124 GVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.3 bits (103), Expect = 6e-06
 Identities = 16/127 (12%), Positives = 32/127 (25%), Gaps = 16/127 (12%)

Query: 625 TALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSS 684
             L  +   G  D+   ++    +          A           +       G ++++
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 685 PSDDSSSHLCSQGKKSG-------------VHAKTQT-GDTA--LTYACENGHTDVADLL 728
              D  + L      +              V A T +   TA       E G+T  +  L
Sbjct: 63  ADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFL 122

Query: 729 LSYGANL 735
                 +
Sbjct: 123 YGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (99), Expect = 2e-05
 Identities = 15/153 (9%), Positives = 42/153 (27%), Gaps = 32/153 (20%)

Query: 409 SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHD 468
           +LL  +   G ++L Q ++    +      +G         +   +            + 
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNA 62

Query: 469 FFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIE-- 526
              +  +                                    + V  FL+++GA +   
Sbjct: 63  ADSDGWTPLHCA--------------------------ASCNNVQVCKFLVESGAAVFAM 96

Query: 527 ----LGASTPLMEAAQEGHLELVRYLLDSGAQV 555
               +  +    E  +EG+ +  ++L     ++
Sbjct: 97  TYSDMQTAADKCEEMEEGYTQCSQFLYGVQEKM 129

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]} Length = 130

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (99), Expect = 2e-05
 Identities = 27/145 (18%), Positives = 47/145 (32%), Gaps = 21/145 (14%)

Query: 292 SALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVS 351
           + L  +  +G  D+V+ ++    D     DE  TAL  A   GH                
Sbjct: 3   ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHT--------------- 47

Query: 352 AYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTD-EGESL 410
                  F        ++        L  A S  +V+  K L+  G +V   T  + ++ 
Sbjct: 48  ---EIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQVCKFLVESGAAVFAMTYSDMQTA 104

Query: 411 LSLACSA--GYYELAQVLLAMHANV 433
                    GY + +Q L  +   +
Sbjct: 105 ADKCEEMEEGYTQCSQFLYGVQEKM 129

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 70.4 bits (171), Expect = 7e-15
 Identities = 28/139 (20%), Positives = 44/139 (31%), Gaps = 10/139 (7%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQ------SSSGNTPLMYACA---GGHEAVVRVL 242
             L EA  +  I  +      G D+  +           T L  A          +V  L
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 243 LECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGH 302
           ++   N++     G T L       +    K+LL   A I    NE  E+ L +A    H
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIA-NESGETPLDIAKRLKH 126

Query: 303 LDMVRFLLSAGADQEHKTD 321
                 L  A + + +   
Sbjct: 127 EHCEELLTQALSGRFNSHV 145

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 68.8 bits (167), Expect = 3e-14
 Identities = 37/166 (22%), Positives = 65/166 (39%), Gaps = 32/166 (19%)

Query: 126 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 185
           SL +A    D+  + +   +G  + E                            AN  + 
Sbjct: 9   SLCEAVKTRDIFGLLQAYADGVDLTEKIP------------------------LANGHEP 44

Query: 186 GIKGECTPLMEAASS---GFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVL 242
                 T L  A  S     + IV  L+ +  +++ Q+  G+T L Y C   +   +++L
Sbjct: 45  D----ETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLL 100

Query: 243 LECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG-INTHSN 287
           L   A++E  NE+G TPL  A    H    ++L +  +G  N+H +
Sbjct: 101 LRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVH 146

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 63.5 bits (153), Expect = 2e-12
 Identities = 26/141 (18%), Positives = 42/141 (29%), Gaps = 14/141 (9%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKT------QTGDTALTYACEN---GHTDVADLL 581
             L EA +   +  +      G  +  K       +  +TAL  A  +       + D L
Sbjct: 8   HSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFL 67

Query: 582 LSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVH-----AKTQTGDTALTYACENGHT 636
           +    NLD  T     A                           ++G+T L  A    H 
Sbjct: 68  VQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHE 127

Query: 637 DVADLLLSYGANLDNSTMLIE 657
              +LL    +   NS + +E
Sbjct: 128 HCEELLTQALSGRFNSHVHVE 148

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 50.0 bits (118), Expect = 1e-07
 Identities = 26/161 (16%), Positives = 44/161 (27%), Gaps = 32/161 (19%)

Query: 589 DNST---MLIEAAKGGHANVVQLLL------DFPRSVHAKTQTGDTALTYACEN---GHT 636
           D +     L EA K      +               +    +  +TAL  A  +      
Sbjct: 2   DTAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSL 61

Query: 637 DVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHLCSQ 696
            + D L+    NLD  T     A                          +D++       
Sbjct: 62  HIVDFLVQNSGNLDKQTGKGSTALHYC--------------------CLTDNAECLKLLL 101

Query: 697 GKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYGANLRN 737
             K+ +    ++G+T L  A    H    +LL    +   N
Sbjct: 102 RGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFN 142

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 49.2 bits (116), Expect = 2e-07
 Identities = 31/120 (25%), Positives = 49/120 (40%), Gaps = 11/120 (9%)

Query: 488 GAKINA-----HTEETQETALTLAC---CGGFLDVADFLLKNGANIEL---GASTPLMEA 536
           G  +       +  E  ETAL LA        L + DFL++N  N++      ST L   
Sbjct: 29  GVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGSTALHYC 88

Query: 537 AQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNSTMLIE 596
               + E ++ LL   A +    ++G+T L  A    H    +LL    +   NS + +E
Sbjct: 89  CLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALSGRFNSHVHVE 148

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]} Length = 154

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 48.8 bits (115), Expect = 2e-07
 Identities = 21/142 (14%), Positives = 39/142 (27%), Gaps = 41/142 (28%)

Query: 253 NENGHTPLMEAASAGHVGVAKILLEYGAGIN-----THSNEFKESALTLACY---KGHLD 304
                  L EA     +         G  +       + +E  E+AL LA     +  L 
Sbjct: 3   TAAKLHSLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLH 62

Query: 305 MVRFLLSAGADQEHKTDEM---------------------------------HTALMEAS 331
           +V FL+    + + +T +                                   T L  A 
Sbjct: 63  IVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAK 122

Query: 332 MDGHVEVAKLLLDSGAQSVSAY 353
              H    +LL  + +   +++
Sbjct: 123 RLKHEHCEELLTQALSGRFNSH 144

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 69.1 bits (167), Expect = 2e-14
 Identities = 41/155 (26%), Positives = 66/155 (42%), Gaps = 1/155 (0%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
             L  AA+ G +E +  L+ +  +VN Q+  G T L     G  E   R+ L  GAN + 
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRL-LLRGANPDL 61

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
            +  G   + +AA AG +   + LLE+ A +N   NE        A       +   +  
Sbjct: 62  KDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKH 121

Query: 312 AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSG 346
             ++  H+  +  TA   A + G  EV  L+  +G
Sbjct: 122 TASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.6 bits (137), Expect = 2e-10
 Identities = 33/154 (21%), Positives = 46/154 (29%), Gaps = 38/154 (24%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGA---- 586
             L  AA  G LE +  LL +   V+A+   G TAL             LLL        
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 587 ----------------------------------NLDNSTMLIEAAKGGHANVVQLLLDF 612
                                             N  N  + + A +G    V  L+   
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHT 122

Query: 613 PRSVHAKTQTGDTALTYACENGHTDVADLLLSYG 646
             +V  +   GDTA   A   G  +V  L+ + G
Sbjct: 123 ASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 57.2 bits (136), Expect = 3e-10
 Identities = 28/169 (16%), Positives = 44/169 (26%), Gaps = 15/169 (8%)

Query: 564 TALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTG 623
             L  A   G  +    LL    N++        A+ G       ++       A+    
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVN--------AQNGFGRTALQVMKLGNPEIARRLLL 54

Query: 624 DTALTYACENGHTDVADLLLSYGANLDNSTMLIEAAKGGHANVVQLLLDFPRSVIGGSLS 683
             A     +     V       G      T+L   A     +    L     +  G    
Sbjct: 55  RGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEG---- 110

Query: 684 SPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLLSYG 732
                       +   S V  +   GDTA   A   G  +V  L+ + G
Sbjct: 111 ---HLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 55.3 bits (131), Expect = 1e-09
 Identities = 42/156 (26%), Positives = 70/156 (44%), Gaps = 2/156 (1%)

Query: 158 SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVN 217
           + L+ A + G  E    LL  + NV  +   G     +     G  EI R L+  GA+ +
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVM--KLGNPEIARRLLLRGANPD 60

Query: 218 GQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE 277
            +  +G   +  A   G    ++ LLE  A+V   +  G+ PL  AA  GH+ V + L++
Sbjct: 61  LKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVK 120

Query: 278 YGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG 313
           + A    H N   ++A  LA   G  ++V  + + G
Sbjct: 121 HTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 53.7 bits (127), Expect = 5e-09
 Identities = 30/153 (19%), Positives = 50/153 (32%), Gaps = 1/153 (0%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L  A + GD++ +  LL    +V+     G + L +         A+ LL   AN + + 
Sbjct: 5   LASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEI-ARRLLLRGANPDLKD 63

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECG 246
             G       A +     +  LL          +       + A  G    V  ++    
Sbjct: 64  RTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTA 123

Query: 247 ANVEDHNENGHTPLMEAASAGHVGVAKILLEYG 279
           +NV   N  G T    A   G   V  ++   G
Sbjct: 124 SNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.5 bits (103), Expect = 7e-06
 Identities = 19/179 (10%), Positives = 45/179 (25%), Gaps = 23/179 (12%)

Query: 374 YSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV 433
           +   L  A + GD++ +  LL    +V+     G + L +               +    
Sbjct: 1   WGNELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-------------LGNPE 47

Query: 434 EDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINA 493
             R +            +G     + + + +        +   +             + A
Sbjct: 48  IARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAA 107

Query: 494 HTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLDSG 552
                +     +      +   +     G        T    A   G  E+V  +  +G
Sbjct: 108 KEGHLRVVEFLVKHTASNVGHRN---HKG-------DTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (102), Expect = 8e-06
 Identities = 22/177 (12%), Positives = 41/177 (23%), Gaps = 23/177 (12%)

Query: 409 SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHD 468
           + L+ A + G  E    LL  + NV  +   G     +    +           A     
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMKLGNPEIARRLLLRGANPDLK 62

Query: 469 FFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELG 528
                  ++    +  L     +     +                    L          
Sbjct: 63  DRTGFAVIHDAARAGFLDTLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVV------- 115

Query: 529 ASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYG 585
                              +  + + V  +   GDTA   A   G  +V  L+ + G
Sbjct: 116 ----------------EFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG 156

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (84), Expect = 0.002
 Identities = 6/25 (24%), Positives = 8/25 (32%)

Query: 711 TALTYACENGHTDVADLLLSYGANL 735
             L  A   G  +    LL    N+
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNV 27

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 37.2 bits (84), Expect = 0.002
 Identities = 31/181 (17%), Positives = 53/181 (29%), Gaps = 27/181 (14%)

Query: 33  SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEV 92
           + L+ A + G  E    LL  + NV  +   G     +                      
Sbjct: 3   NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVM--------------------- 41

Query: 93  LRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHET 152
                  +          L     +         +  A   G + T++ LL     V+  
Sbjct: 42  ------KLGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLDTLQTLLEFQADVNIE 95

Query: 153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH 212
            +EG   L LA   G+  + + L+   A+          T    A   G  E+V L+  +
Sbjct: 96  DNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQAN 155

Query: 213 G 213
           G
Sbjct: 156 G 156

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 59.4 bits (142), Expect = 5e-11
 Identities = 34/154 (22%), Positives = 59/154 (38%), Gaps = 4/154 (2%)

Query: 192 TPLMEAASSGFIEIVR-LLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE 250
             L  AA+ G ++ VR LL       +  +  G T  +     G  A+   LL+ GA+  
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTA-LQVMMFGSTAIALELLKQGASPN 62

Query: 251 DHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
             + +G +P+ +AA  G +   K+L+E+GA +N                     +     
Sbjct: 63  VQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA- 121

Query: 311 SAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD 344
            A +D   +     T L  A   G  ++  +L  
Sbjct: 122 -AESDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 58.3 bits (139), Expect = 1e-10
 Identities = 41/152 (26%), Positives = 67/152 (44%), Gaps = 4/152 (2%)

Query: 127 LVQACSDGDVKTVKKLL-TEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 185
           L  A + GDV+ V++LL  E          G++  +L           + L       + 
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKT--ALQVMMFGSTAIALELLKQGASPNV 63

Query: 186 GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLEC 245
                 +P+ +AA +GF++ +++L+ HGADVN    +G  P+  A   GH AVV  L   
Sbjct: 64  QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAE 123

Query: 246 GANVEDHNENGHTPLMEAASAGHVGVAKILLE 277
            +++   +  G TPL  A   G   +  IL  
Sbjct: 124 -SDLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.7 bits (122), Expect = 2e-08
 Identities = 31/154 (20%), Positives = 44/154 (28%), Gaps = 39/154 (25%)

Query: 529 ASTPLMEAAQEGHLELVRYLLDS-GAQVHAKTQTGDTALTYACENGHTDVADLLLSY--- 584
           A   L  AA  G ++ VR LL        A  + G TAL            +LL      
Sbjct: 2   AGDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASP 61

Query: 585 ----------------------------------GANLDNSTMLIEAAKGGHANVVQLLL 610
                                               +   +  +  A + GH  VV  L 
Sbjct: 62  NVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA 121

Query: 611 DFPRSVHAKTQTGDTALTYACENGHTDVADLLLS 644
                +H +   G T L  A + G  D+ D+L  
Sbjct: 122 AES-DLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 47.1 bits (110), Expect = 8e-07
 Identities = 30/150 (20%), Positives = 46/150 (30%), Gaps = 14/150 (9%)

Query: 594 LIEAAKGGHANVVQLLLD-FPRSVHAKTQTGDTALTYACENGHTDVADLLLSYGANLDNS 652
           L  AA  G    V+ LL        A  + G TAL            +LL   GA+ +  
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELL-KQGASPNVQ 64

Query: 653 TMLIEAAKGGHANVVQLLLDFPRSVIGGSLSSPSDDSSSHL------------CSQGKKS 700
                +     A    L         G  ++ P    +  +                 +S
Sbjct: 65  DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES 124

Query: 701 GVHAKTQTGDTALTYACENGHTDVADLLLS 730
            +H +   G T L  A + G  D+ D+L  
Sbjct: 125 DLHRRDARGLTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.2 bits (92), Expect = 2e-04
 Identities = 26/174 (14%), Positives = 46/174 (26%), Gaps = 26/174 (14%)

Query: 378 LVQACSDGDVKTVKKLL-TEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR 436
           L  A + GDV+ V++LL  E          G++ L +              A+    +  
Sbjct: 6   LSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAI------ALELLKQGA 59

Query: 437 GIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTE 496
               + T          +    +++     H    N     G      +    +      
Sbjct: 60  SPNVQDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGAL---PIHLAVQEGHTA- 115

Query: 497 ETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLELVRYLLD 550
                             +D   ++         TPL  A Q G  +LV  L  
Sbjct: 116 ----------VVSFLAAESDLHRRDARG-----LTPLELALQRGAQDLVDILQG 154

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.6 bits (88), Expect = 6e-04
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 146 GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEI 205
           G  V+     G   + LA   G+  +   L A  +++  R  +G  TPL  A   G  ++
Sbjct: 91  GADVNVPDGTGALPIHLAVQEGHTAVVSFLAA-ESDLHRRDARGL-TPLELALQRGAQDL 148

Query: 206 VRLLINH 212
           V +L  H
Sbjct: 149 VDILQGH 155

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.7 bits (83), Expect = 0.003
 Identities = 24/149 (16%), Positives = 40/149 (26%), Gaps = 14/149 (9%)

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA 352
            L+ A  +G +  VR LL          +      ++  M G   +A  LL  GA     
Sbjct: 5   RLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNVQ 64

Query: 353 YARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGR-------------- 398
                   +D        +           +  D      +    +              
Sbjct: 65  DTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAAES 124

Query: 399 SVHETTDEGESLLSLACSAGYYELAQVLL 427
            +H     G + L LA   G  +L  +L 
Sbjct: 125 DLHRRDARGLTPLELALQRGAQDLVDILQ 153

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]} Length = 156

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.3 bits (82), Expect = 0.004
 Identities = 29/145 (20%), Positives = 48/145 (33%), Gaps = 17/145 (11%)

Query: 325 TALMEASMDGHVEVAKLLLDSGAQSVSA---------------YARHDFFPNDKCERPSS 369
             L  A+  G V+  + LL        A                         +   P+ 
Sbjct: 4   DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMFGSTAIALELLKQGASPNV 63

Query: 370 ISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAM 429
              + +  +  A   G + T+K L+  G  V+     G   + LA   G+  +   L A 
Sbjct: 64  QDTSGTSPVHDAARTGFLDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLAA- 122

Query: 430 HANVEDRGIKGECTPLMEAASSGRQ 454
            +++  R  +G  TPL  A   G Q
Sbjct: 123 ESDLHRRDARGL-TPLELALQRGAQ 146

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 56.5 bits (134), Expect = 3e-10
 Identities = 27/121 (22%), Positives = 40/121 (33%), Gaps = 5/121 (4%)

Query: 529 ASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL 588
           ++  L  AA  G +E VR LL++GA  +A    G   +             LLL      
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 589 DNSTMLIEAAKGGHANVVQ-----LLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLL 643
                 +       A         +L      +  +   G   +  A E GH DVA  L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

Query: 644 S 644
           +
Sbjct: 123 A 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 54.6 bits (129), Expect = 1e-09
 Identities = 32/121 (26%), Positives = 51/121 (42%), Gaps = 1/121 (0%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
             L  AA+ G +E VR L+  GA+ N  +S G  P+     G       +LL        
Sbjct: 5   DWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCA 64

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS 311
                  P+ +AA  G +    +L   GA ++   + +    + LA   GH D+ R+L +
Sbjct: 65  DPATLTRPVHDAAREGFLDTLVVLHRAGARLD-VRDAWGRLPVDLAEELGHRDVARYLRA 123

Query: 312 A 312
           A
Sbjct: 124 A 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 51.9 bits (122), Expect = 1e-08
 Identities = 34/123 (27%), Positives = 50/123 (40%), Gaps = 1/123 (0%)

Query: 223 GNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGI 282
               L  A A G    VR LLE GAN  +   +     ++    G   VA++LL +GA  
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGAN-PNAPNSYGRRPIQVMMMGSARVAELLLLHGAEP 61

Query: 283 NTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLL 342
           N          +  A  +G LD +  L  AGA  + +       +  A   GH +VA+ L
Sbjct: 62  NCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYL 121

Query: 343 LDS 345
             +
Sbjct: 122 RAA 124

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 48.4 bits (113), Expect = 2e-07
 Identities = 19/121 (15%), Positives = 30/121 (24%), Gaps = 13/121 (10%)

Query: 623 GDTALTYACENGHTDVADLLLSYGANLD-------------NSTMLIEAAKGGHANVVQL 669
               L  A   G  +    LL  GAN +                    A           
Sbjct: 3   SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPN 62

Query: 670 LLDFPRSVIGGSLSSPSDDSSSHLCSQGKKSGVHAKTQTGDTALTYACENGHTDVADLLL 729
             D          ++      + +      + +  +   G   +  A E GH DVA  L 
Sbjct: 63  CADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLR 122

Query: 730 S 730
           +
Sbjct: 123 A 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (95), Expect = 5e-05
 Identities = 29/118 (24%), Positives = 48/118 (40%), Gaps = 1/118 (0%)

Query: 127 LVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRG 186
           L  A + G V+ V+ LL  G +     +            G   +A++LL   A      
Sbjct: 7   LATAAARGRVEEVRALLEAG-ANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAEPNCAD 65

Query: 187 IKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE 244
                 P+ +AA  GF++ + +L   GA ++ + + G  P+  A   GH  V R L  
Sbjct: 66  PATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.2 bits (89), Expect = 3e-04
 Identities = 26/136 (19%), Positives = 44/136 (32%), Gaps = 18/136 (13%)

Query: 293 ALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSA 352
            L  A  +G ++ VR LL AGA+           +    M                    
Sbjct: 6   WLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSAR---------------- 49

Query: 353 YARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLS 412
               +       E   +   T +R +  A  +G + T+  L   G  +      G   + 
Sbjct: 50  --VAELLLLHGAEPNCADPATLTRPVHDAAREGFLDTLVVLHRAGARLDVRDAWGRLPVD 107

Query: 413 LACSAGYYELAQVLLA 428
           LA   G+ ++A+ L A
Sbjct: 108 LAEELGHRDVARYLRA 123

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]} Length = 125

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 36.5 bits (82), Expect = 0.002
 Identities = 25/147 (17%), Positives = 36/147 (24%), Gaps = 23/147 (15%)

Query: 405 DEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAY 464
           +     L+ A + G  E  + LL   AN       G     +    S R   L     A 
Sbjct: 1   EPSADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMMMGSARVAELLLLHGAE 60

Query: 465 ARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGAN 524
                                        H    +    TL          D     G  
Sbjct: 61  PNCADPATLT----------------RPVHDAAREGFLDTLVVLHRAGARLDVRDAWG-- 102

Query: 525 IELGASTPLMEAAQEGHLELVRYLLDS 551
                  P+  A + GH ++ RYL  +
Sbjct: 103 -----RLPVDLAEELGHRDVARYLRAA 124

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 45.7 bits (106), Expect = 1e-06
 Identities = 37/121 (30%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 223 GNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGI 282
            +   M+A   G    V+  +  G +V    E G  PL  AA  G + + + LL  GA I
Sbjct: 2   CDKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADI 61

Query: 283 NTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLL 342
           N             A Y+GH+  V+ LLS GAD+  K  +  TAL         +  K L
Sbjct: 62  NAPDKHHITPL-LSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEAT----DNQAIKAL 116

Query: 343 L 343
           L
Sbjct: 117 L 117

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 44.5 bits (103), Expect = 4e-06
 Identities = 32/117 (27%), Positives = 49/117 (41%), Gaps = 8/117 (6%)

Query: 531 TPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANL-- 588
              M A + G L+ V+  +  G  V+   + G   L YA + G  ++ + LL  GA++  
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 589 ---DNSTMLIEAAKGGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLL 642
               + T L+ A   GH + V+LLL        K   G TAL          +  LL
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEATDNQ---AIKALL 117

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.7 bits (88), Expect = 3e-04
 Identities = 32/119 (26%), Positives = 50/119 (42%), Gaps = 5/119 (4%)

Query: 192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVED 251
              M A  +G ++ V+  +  G DVN     G  PL YA   G   ++  LL  GA++  
Sbjct: 4   KEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINA 63

Query: 252 HNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLL 310
            +++  TPL+ A   GHV   K+ L       T       +AL     +     ++ LL
Sbjct: 64  PDKHHITPLLSAVYEGHVSCVKL-LLSKGADKTVKGPDGLTALEATDNQA----IKALL 117

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]} Length = 118

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

 Score = 38.3 bits (87), Expect = 5e-04
 Identities = 29/121 (23%), Positives = 51/121 (42%), Gaps = 5/121 (4%)

Query: 124 ERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVE 183
           ++  + A  +GD+  VK  + +G  V+ T + G   L  A   G  E+ + LL   A++ 
Sbjct: 3   DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADIN 62

Query: 184 DRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLL 243
                      + A   G +  V+LL++ GAD   +   G T L           ++ LL
Sbjct: 63  APDKHHITPL-LSAVYEGHVSCVKLLLSKGADKTVKGPDGLTALEAT----DNQAIKALL 117

Query: 244 E 244
           +
Sbjct: 118 Q 118

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	739
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1n11a_	408	Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1uoha_	223	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1oy3d_	255	Transcription factor inhibitor I-kappa-B-beta, IKB	100.0
d1wdya_	285	RNase L, 2-5a-dependent ribonuclease {Human (Homo	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	100.0
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	100.0
d1ixva_	229	26S proteasome non-ATPase regulatory subunit 10, g	99.97
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.97
d2fo1e1	277	Lin-12 {Caenorhabditis elegans [TaxId: 6239]}	99.97
d1s70b_	291	Myosin phosphatase targeting subunit 1, MYPT1 {Chi	99.97
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.96
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.96
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.96
d1iknd_	221	I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606	99.96
d1ot8a_	209	Neurogenic locus notch receptor domain {Fruit fly	99.95
d1k1aa_	228	bcl-3 {Human (Homo sapiens) [TaxId: 9606]}	99.94
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.93
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.93
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.93
d2ajaa1	346	Hypothetical protein LPG2416 {Legionella pneumophi	99.93
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.93
d1ihba_	156	p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]	99.92
d1bd8a_	156	Cell cycle inhibitor p19ink4D {Human (Homo sapiens	99.91
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.9
d1awcb_	153	GA bindinig protein (GABP) beta 1 {Mouse (Mus musc	99.9
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.89
d1bi7b_	125	Cell cycle inhibitor p16ink4A {Human (Homo sapiens	99.89
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.87
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.87
d1myoa_	118	Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]	99.87
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.86
d1ycsb1	130	53BP2 {Human (Homo sapiens) [TaxId: 9606]}	99.86
d1dcqa1	154	Pyk2-associated protein beta {Mouse (Mus musculus)	99.84
d1sw6a_	301	Swi6 ankyrin-repeat fragment {Baker's yeast (Sacch	99.83

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=2.8e-49  Score=404.04  Aligned_cols=377  Identities=32%  Similarity=0.391  Sum_probs=208.8

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      |||.||..|++++|++|++.|+++|.+|..|+||||+|+..|+.++|++|+++|++++..+..|. ||||+|+..|    
T Consensus         3 pL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~g~-t~L~~A~~~g----   77 (408)
T d1n11a_           3 PLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKDDQ-TPLHCAARIG----   77 (408)
T ss_dssp             HHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTTSC-CHHHHHHHHT----
T ss_pred             hHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCCCC-CHHHHHHHcC----
Confidence            45555555555555555555555555555555555555555555555555555555555444332 4444333322    


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL  160 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L  160 (739)
                                                                            +.+++++|++.+.+.........+++
T Consensus        78 ------------------------------------------------------~~~~~~~Ll~~~~~~~~~~~~~~~~~  103 (408)
T d1n11a_          78 ------------------------------------------------------HTNMVKLLLENNANPNLATTAGHTPL  103 (408)
T ss_dssp             ------------------------------------------------------CHHHHHHHHHHTCCTTCCCTTCCCHH
T ss_pred             ------------------------------------------------------CHHHHHHHHHhhhccccccccccchh
Confidence                                                                  34445555554444444444444555


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHH
Q psy903          161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR  240 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~  240 (739)
                      ..+...+...........+......+.. +.++++.|+..++.+++++|+++|++++..+..|.+|||+|+..|+.++++
T Consensus       104 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~l~~a~~~~~~~~v~~ll~~~~~~~~~~~~~~~~L~~A~~~~~~~~~~  182 (408)
T d1n11a_         104 HIAAREGHVETVLALLEKEASQACMTKK-GFTPLHVAAKYGKVRVAELLLERDAHPNAAGKNGLTPLHVAVHHNNLDIVK  182 (408)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCSSCCCHHHHHHHTTCHHHHH
T ss_pred             hhhhhhcccccccccccccccccccccc-cchHHHHHHHcCCHHHHHHHHHcCCCCCcCCCcCchHHHHHHHcCCHHHHH
Confidence            5555555544444444444443333222 235555555555555555555555555555555555555555555555555


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCC
Q psy903          241 VLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKT  320 (739)
Q Consensus       241 ~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~  320 (739)
                      +|+++|++++..+..|.||++.++.....++...++..+...... +..+.||++.|+..++.++++++.+.+...+..+
T Consensus       183 ~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~-~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~  261 (408)
T d1n11a_         183 LLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGSANAE-SVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN  261 (408)
T ss_dssp             HHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC
T ss_pred             HHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhcccccccc-CCCCCCHHHHHHHhCcHhHhhhhhcccccccccc
Confidence            555555555555555555555555555555544444444333322 2224444444444444444444444444444444


Q ss_pred             CcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCC
Q psy903          321 DEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSV  400 (739)
Q Consensus       321 ~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~  400 (739)
                      .                                                                               
T Consensus       262 ~-------------------------------------------------------------------------------  262 (408)
T d1n11a_         262 K-------------------------------------------------------------------------------  262 (408)
T ss_dssp             T-------------------------------------------------------------------------------
T ss_pred             C-------------------------------------------------------------------------------
Confidence            4                                                                               


Q ss_pred             ccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHHHcCCccchhhHHHhhhccCCCCCCcccccch
Q psy903          401 HETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQ  480 (739)
Q Consensus       401 ~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  480 (739)
                           .|.+|++.++..++.+++++|+++|++++.....                                         
T Consensus       263 -----~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~-----------------------------------------  296 (408)
T d1n11a_         263 -----SGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRM-----------------------------------------  296 (408)
T ss_dssp             -----TCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSS-----------------------------------------
T ss_pred             -----CCCChhhhhhhcCcHHHHHHHHHCCCcccccccc-----------------------------------------
Confidence                 4445555555555555555555555444433221                                         


Q ss_pred             hhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCCC---CCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCC
Q psy903          481 ASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANI---ELGASTPLMEAAQEGHLELVRYLLDSGAQVHA  557 (739)
Q Consensus       481 ~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~---~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~  557 (739)
                                        +.+||+.++..++.++++++++.|.++   +..|.||||.|++.|+.++|++|+++|++++.
T Consensus       297 ------------------~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~~g~~~iv~~Ll~~GAd~n~  358 (408)
T d1n11a_         297 ------------------GYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQQGHTDIVTLLLKNGASPNE  358 (408)
T ss_dssp             ------------------CCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCC
T ss_pred             ------------------ccccchhhcccCcceeeeeeccccccccccCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCC
Confidence                              124444444445555555555555544   33578999999999999999999999999999


Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHH
Q psy903          558 KTQTGDTALTYACENGHTDVADLL  581 (739)
Q Consensus       558 ~d~~g~t~l~~A~~~~~~~iv~~L  581 (739)
                      +|.+|+||||+|++.|+.++|++|
T Consensus       359 ~d~~G~t~L~~A~~~~~~~iv~~L  382 (408)
T d1n11a_         359 VSSDGTTPLAIAKRLGYISVTDVL  382 (408)
T ss_dssp             CCSSSCCHHHHHHHTTCHHHHHHH
T ss_pred             CCCCCCCHHHHHHHcCCHHHHHHH
Confidence            999999999999999999988865

>d1n11a_ d.211.1.1 (A:) Ankyrin-R {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Ankyrin-R
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.1e-48  Score=394.09  Aligned_cols=378  Identities=33%  Similarity=0.402  Sum_probs=250.7

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHH
Q psy903          125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIE  204 (739)
Q Consensus       125 ~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~  204 (739)
                      ||||.||..|+.++|++|+++|++++..|..|.||||+|+..|+.+++++|+++|++++..+.. |+|||++|+..|+.+
T Consensus         2 TpL~~Aa~~g~~~~v~~Ll~~g~~in~~d~~g~TpL~~A~~~g~~~iv~~Ll~~gadi~~~~~~-g~t~L~~A~~~g~~~   80 (408)
T d1n11a_           2 TPLHVASFMGHLPIVKNLLQRGASPNVSNVKVETPLHMAARAGHTEVAKYLLQNKAKVNAKAKD-DQTPLHCAARIGHTN   80 (408)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCSCCSSSCCCCHHHHHHHHTCHHHHHHHHHHTCCSSCCCTT-SCCHHHHHHHHTCHH
T ss_pred             ChHHHHHHCcCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCCCCC-CCCHHHHHHHcCCHH
Confidence            6777777777777777777777777777777777777777777777777777777777665543 457777777777777


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcc
Q psy903          205 IVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINT  284 (739)
Q Consensus       205 ~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~  284 (739)
                      ++++|+..+.++........+++..+...+...........+......+..+.++++.|+..++.+++++|++++.+++.
T Consensus        81 ~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~ll~~~~~~~~  160 (408)
T d1n11a_          81 MVKLLLENNANPNLATTAGHTPLHIAAREGHVETVLALLEKEASQACMTKKGFTPLHVAAKYGKVRVAELLLERDAHPNA  160 (408)
T ss_dssp             HHHHHHHHTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTC
T ss_pred             HHHHHHHhhhccccccccccchhhhhhhhcccccccccccccccccccccccchHHHHHHHcCCHHHHHHHHHcCCCCCc
Confidence            77777777766666666667777777777777776666677766666777777777777777777777777777776665


Q ss_pred             cCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCCchhhhcccCCCCCCCC
Q psy903          285 HSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQSVSAYARHDFFPNDKC  364 (739)
Q Consensus       285 ~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~~~~~~~~~~~~~~~~~  364 (739)
                      .. ..+.+||++|+..++.+++++|+++|++++..+..+.+|++.+......++...++..+..                
T Consensus       161 ~~-~~~~~~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~----------------  223 (408)
T d1n11a_         161 AG-KNGLTPLHVAVHHNNLDIVKLLLPRGGSPHSPAWNGYTPLHIAAKQNQVEVARSLLQYGGS----------------  223 (408)
T ss_dssp             CC-SSCCCHHHHHHHTTCHHHHHHHGGGTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC----------------
T ss_pred             CC-CcCchHHHHHHHcCCHHHHHHHHhcCCcccccCCCCCCcchhhhccchhhhhhhhhhcccc----------------
Confidence            33 3366777777777777777777777777777777777777766666666666555543322                


Q ss_pred             CCCCCcccccchHHHHHHhcCCHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcH
Q psy903          365 ERPSSISYTYSRSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTP  444 (739)
Q Consensus       365 ~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~  444 (739)
                                                         ....+..+.||++.|+..+..++++++.+.+......+       
T Consensus       224 -----------------------------------~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~-------  261 (408)
T d1n11a_         224 -----------------------------------ANAESVQGVTPLHLAAQEGHAEMVALLLSKQANGNLGN-------  261 (408)
T ss_dssp             -----------------------------------TTCCCTTCCCHHHHHHHTTCHHHHHHHHTTTCCTTCCC-------
T ss_pred             -----------------------------------ccccCCCCCCHHHHHHHhCcHhHhhhhhcccccccccc-------
Confidence                                               22344556677777777777777777666554433322       


Q ss_pred             HHHHHHcCCccchhhHHHhhhccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCC
Q psy903          445 LMEAASSGRQCNLNESVSAYARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGAN  524 (739)
Q Consensus       445 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~  524 (739)
                                                                                                      
T Consensus       262 --------------------------------------------------------------------------------  261 (408)
T d1n11a_         262 --------------------------------------------------------------------------------  261 (408)
T ss_dssp             --------------------------------------------------------------------------------
T ss_pred             --------------------------------------------------------------------------------
Confidence                                                                                            


Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCCC-----CCcHHHHHHH
Q psy903          525 IELGASTPLMEAAQEGHLELVRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSYGANLD-----NSTMLIEAAK  599 (739)
Q Consensus       525 ~~~~~~t~L~~A~~~~~~~~v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~~~~~~-----~~~~l~~A~~  599 (739)
                        ..|.+|++.|++.++.+++++|+++|++++..+..+.|||+.++..++.+++++++++|++++     |.||||.|++
T Consensus       262 --~~g~~~l~~a~~~~~~~i~~~Ll~~g~~~~~~~~~~~t~L~~~~~~~~~~~~~~ll~~g~~in~~d~~G~T~Lh~A~~  339 (408)
T d1n11a_         262 --KSGLTPLHLVAQEGHVPVADVLIKHGVMVDATTRMGYTPLHVASHYGNIKLVKFLLQHQADVNAKTKLGYSPLHQAAQ  339 (408)
T ss_dssp             --TTCCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCSSCCCHHHHHHHSSCSHHHHHHHHTTCCTTCCCTTSCCHHHHHHH
T ss_pred             --CCCCChhhhhhhcCcHHHHHHHHHCCCccccccccccccchhhcccCcceeeeeeccccccccccCCCCCCHHHHHHH
Confidence              223445555555555555555555555555555555555555555555555555544444332     4445555555


Q ss_pred             cCCHHHHHHHhhCCCCCCcCCCCCCcHHHHHHHcCCHHHHHHHHH
Q psy903          600 GGHANVVQLLLDFPRSVHAKTQTGDTALTYACENGHTDVADLLLS  644 (739)
Q Consensus       600 ~~~~~~v~~L~~~~~~~~~~~~~g~t~l~~A~~~~~~~~v~~L~~  644 (739)
                      .|+.++|++|+++|++++.+|..|+||||+|+++|+.++|++|..
T Consensus       340 ~g~~~iv~~Ll~~GAd~n~~d~~G~t~L~~A~~~~~~~iv~~L~~  384 (408)
T d1n11a_         340 QGHTDIVTLLLKNGASPNEVSSDGTTPLAIAKRLGYISVTDVLKV  384 (408)
T ss_dssp             TTCHHHHHHHHHTTCCSCCCCSSSCCHHHHHHHTTCHHHHHHHHH
T ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            566666777777777888888888888888888888888886644

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=3e-36  Score=276.27  Aligned_cols=215  Identities=29%  Similarity=0.404  Sum_probs=195.6

Q ss_pred             hhhhhhcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            2 LVQACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         2 L~~A~~~g~~~~v~~ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      ||.++.+|+++.|+.++. .+.+++.+|..|+||||+|+..|+.+++++|++.+......+..+. ++++          
T Consensus         7 ~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~~-~~~~----------   75 (223)
T d1uoha_           7 VCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAGW-SPLH----------   75 (223)
T ss_dssp             HHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTCC-CHHH----------
T ss_pred             HHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhccccccccccccccccccccc-cccc----------
Confidence            688999999999988887 6778999999999999999999999999999999988766655443 4444          


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL  160 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L  160 (739)
                                                                      .++..++.+++++|+++|++++..|..|.|||
T Consensus        76 ------------------------------------------------~~~~~~~~~i~~~Ll~~~~d~~~~d~~g~tpL  107 (223)
T d1uoha_          76 ------------------------------------------------IAASAGRDEIVKALLGKGAQVNAVNQNGCTPL  107 (223)
T ss_dssp             ------------------------------------------------HHHHHTCHHHHHHHHHTTCCTTCCCTTCCCHH
T ss_pred             ------------------------------------------------ccccccccchhHHHhccCceeEeeCCCCCchh
Confidence                                                            45555688999999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHH
Q psy903          161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR  240 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~  240 (739)
                      |+|+..|+.+++++|+++|++++..+.. |.||||+|+..++.+++++|++.|.+++.+|..|.||||+|+..|+.++++
T Consensus       108 ~~A~~~~~~e~~~~Ll~~g~d~~~~~~~-~~t~L~~a~~~~~~~~~~~L~~~~~~i~~~d~~g~TpL~~Aa~~g~~~~v~  186 (223)
T d1uoha_         108 HYAASKNRHEIAVMLLEGGANPDAKDHY-EATAMHRAAAKGNLKMIHILLYYKASTNIQDTEGNTPLHLACDEERVEEAK  186 (223)
T ss_dssp             HHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHH
T ss_pred             hHHHHcCCHHHHHHHHHCCCCCCCcCCC-CCccchhhhhcCCcchhhhhccccceeeeccCCCCceeccccccCcHHHHH
Confidence            9999999999999999999998877654 569999999999999999999999999999999999999999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903          241 VLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE  277 (739)
Q Consensus       241 ~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~  277 (739)
                      +|++.|++++.+|.+|+||||+| ..|+.+++++|++
T Consensus       187 ~LL~~Gad~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         187 LLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             HHHHTTCCSCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             HHHHCCCCCCCCCCCCCCHHHHH-HCCCHHHHhcccC
Confidence            99999999999999999999998 5799999999985

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=6.6e-33  Score=266.69  Aligned_cols=260  Identities=32%  Similarity=0.405  Sum_probs=203.4

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCC-CCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTD-EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGK   79 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~-~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~   79 (739)
                      .|+.|++.||+++|++|+++|+++|.++. .|+||||+|+..|+.+++++|++.|......+.... +|.+.+..     
T Consensus         8 ~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~~~eiv~~L~~~~~~~~~~~~~~~-~~~~~~~~-----   81 (285)
T d1wdya_           8 LLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMSREDIVELLLRHGADPVLRKKNGA-TPFLLAAI-----   81 (285)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCC-CHHHHHHH-----
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcCCHHHhhhhccccccccccccccc-hhhHHHhh-----
Confidence            37899999999999999999999987754 699999999999999999999999988876665554 55555554     


Q ss_pred             cccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcH
Q psy903           80 LATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESL  159 (739)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~  159 (739)
                                                                           .+..+....+++...+....+..+.++
T Consensus        82 -----------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~  108 (285)
T d1wdya_          82 -----------------------------------------------------AGSVKLLKLFLSKGADVNECDFYGFTA  108 (285)
T ss_dssp             -----------------------------------------------------HTCHHHHHHHHHTTCCTTCBCTTCCBH
T ss_pred             -----------------------------------------------------cCCccccchhhhhcccccccccCCCch
Confidence                                                                 445666777777766666667778888


Q ss_pred             HHHHHHcCcHHHHHHHHhCCCCcccc---------CCCCCCcHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCcHHHH
Q psy903          160 LSLACSAGYYELAQVLLAMHANVEDR---------GIKGECTPLMEAASSGFIEIVRLLINH-GADVNGQSSSGNTPLMY  229 (739)
Q Consensus       160 L~~A~~~~~~~~v~~Ll~~~~~~~~~---------~~~~~~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~L~~  229 (739)
                      +++|+..++...+..++....+.+..         ....|.||||+|+..|+.+++++|+++ |++++..+..|.+++..
T Consensus       109 l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~~~~~  188 (285)
T d1wdya_         109 FMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRNALIH  188 (285)
T ss_dssp             HHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCCHHHH
T ss_pred             hHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCccccc
Confidence            88888888888888887766554322         223456888888888888888888864 78888888888887776


Q ss_pred             HHhc----CcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc-CCCCcccCcCccCCHHHHHHHcCCHH
Q psy903          230 ACAG----GHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY-GAGINTHSNEFKESALTLACYKGHLD  304 (739)
Q Consensus       230 A~~~----~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~-~~~~~~~~~~~~~~~l~~A~~~~~~~  304 (739)
                      +...    +..+++++|+++|++++.++..|.||||.|+..|+.+++++|+++ |.+++.. +..|.||||+|++.|+.+
T Consensus       189 ~~~~~~~~~~~~i~~~Li~~ga~~n~~~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~-d~~G~TpL~~A~~~~~~e  267 (285)
T d1wdya_         189 ALLSSDDSDVEAITHLLLDHGADVNVRGERGKTPLILAVEKKHLGLVQRLLEQEHIEINDT-DSDGKTALLLAVELKLKK  267 (285)
T ss_dssp             HHHCSCTTTHHHHHHHHHHTTCCSSCCCTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCC-CTTSCCHHHHHHHTTCHH
T ss_pred             ccccccchHHHHHHHHHHHCCCCCCccCCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCC-CCCCCCHHHHHHHcCCHH
Confidence            6553    345688888888888888888888888888888888888888874 6677653 455888888888888888


Q ss_pred             HHHHHHHcCCCCCCCC
Q psy903          305 MVRFLLSAGADQEHKT  320 (739)
Q Consensus       305 ~v~~Ll~~~~~~~~~~  320 (739)
                      ++++|+++|++++..|
T Consensus       268 iv~~Ll~~GAd~n~~d  283 (285)
T d1wdya_         268 IAELLCKRGASTDCGD  283 (285)
T ss_dssp             HHHHHHHHSSCSCCSS
T ss_pred             HHHHHHHCCCCCCccc
Confidence            8888888888888765

>d1uoha_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=1e-33  Score=259.33  Aligned_cols=218  Identities=30%  Similarity=0.434  Sum_probs=203.6

Q ss_pred             chHHHHHHHcCCHHHHHHHHh-cCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903          124 ERSLVQACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF  202 (739)
Q Consensus       124 ~~~l~~A~~~~~~~~~~~ll~-~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~  202 (739)
                      .+.++.++.+|+.+.++.+++ .+.+++.+|..|+||||+|+..|+.+++++|++.+.......... .++++.|+..++
T Consensus         4 ~~~~~~~a~~G~~~~v~~~l~~~~~~~~~~D~~G~TpLh~Aa~~g~~e~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~~   82 (223)
T d1uoha_           4 NLMVCNLAYSGKLEELKESILADKSLATRTDQDSRTALHWACSAGHTEIVEFLLQLGVPVNDKDDAG-WSPLHIAASAGR   82 (223)
T ss_dssp             SSHHHHHHHTTCHHHHHHHHHHCGGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCSCCCCTTC-CCHHHHHHHHTC
T ss_pred             HHHHHHHHHhCCHHHHHHHHHhCCCcCcCcCCCCCCHHHHHHHhhhhcccccccccccccccccccc-cccccccccccc
Confidence            567899999999999988875 467889999999999999999999999999999998877666554 599999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCC
Q psy903          203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGI  282 (739)
Q Consensus       203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~  282 (739)
                      .+++++|+++|++++.+|..|.||||+|+..|+.+++++|+++|++++..+.+|.||||+|+..++.+++++|.+++.++
T Consensus        83 ~~i~~~Ll~~~~d~~~~d~~g~tpL~~A~~~~~~e~~~~Ll~~g~d~~~~~~~~~t~L~~a~~~~~~~~~~~L~~~~~~i  162 (223)
T d1uoha_          83 DEIVKALLGKGAQVNAVNQNGCTPLHYAASKNRHEIAVMLLEGGANPDAKDHYEATAMHRAAAKGNLKMIHILLYYKAST  162 (223)
T ss_dssp             HHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCS
T ss_pred             cchhHHHhccCceeEeeCCCCCchhhHHHHcCCHHHHHHHHHCCCCCCCcCCCCCccchhhhhcCCcchhhhhcccccee
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             cccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHH
Q psy903          283 NTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD  344 (739)
Q Consensus       283 ~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~  344 (739)
                      +.. +..|.||||.|+..|+.+++++|++.|++++.+|..|+|||++| ..|+.+++++|++
T Consensus       163 ~~~-d~~g~TpL~~Aa~~g~~~~v~~LL~~Gad~~~~d~~g~tpl~~A-~~~~~~i~~~Ll~  222 (223)
T d1uoha_         163 NIQ-DTEGNTPLHLACDEERVEEAKLLVSQGASIYIENKEEKTPLQVA-KGGLGLILKRMVE  222 (223)
T ss_dssp             CCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHC-CTTHHHHHHHHHC
T ss_pred             eec-cCCCCceeccccccCcHHHHHHHHHCCCCCCCCCCCCCCHHHHH-HCCCHHHHhcccC
Confidence            875 45699999999999999999999999999999999999999998 5799999999985

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=6.2e-35  Score=275.45  Aligned_cols=235  Identities=20%  Similarity=0.168  Sum_probs=167.0

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCC---CcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRS---VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF   77 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~---~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~   77 (739)
                      |||.||+.|+.++|++|++.|++   ++..+..|+||||+|+..|+.+++++|+++|++++..+..+. ||||+|+..+ 
T Consensus        12 ~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~TpL~~A~~~g~~~iv~~Ll~~ga~i~~~d~~g~-tpL~~A~~~~-   89 (255)
T d1oy3d_          12 ALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQTALHLAAILGEASTVEKLYAAGAGVLVAERGGH-TALHLACRVR-   89 (255)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCTTSC-CHHHHHTTTT-
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCCCccchHHhhcccccccccccccccccccccccc-hhhhhhhccC-
Confidence            69999999999999999999888   677888999999999999999999999999999999988776 9999999998 


Q ss_pred             cccccCCCCCCCHHHHHhhhhhhhchHHHHHHH-HHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCC
Q psy903           78 GKLATGDGKLADPEVLRRLTSSVSCALDEAAAA-LTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEG  156 (739)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g  156 (739)
                                 ..++++.+.............. ........+..........................+.+++.++..|
T Consensus        90 -----------~~~~~~~Ll~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g  158 (255)
T d1oy3d_          90 -----------AHTCACVLLQPRPSHPRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDG  158 (255)
T ss_dssp             -----------CHHHHHHHSSSCCSSCCCC-----------------------------------CCCGGGGTTCCCTTS
T ss_pred             -----------chHHHHHHHhhccchhcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccC
Confidence                       5666666544322111000000 0000000000000000011111111112222223356677788888


Q ss_pred             CcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcH
Q psy903          157 ESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHE  236 (739)
Q Consensus       157 ~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~  236 (739)
                      .||||+|+..|+.+++++|++.+++.+......|.||||+|+..|+.+++++|+++|++++.+|..|.||||+|+..++.
T Consensus       159 ~TpLh~A~~~~~~~~v~~Ll~~~~~~~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~d~~g~t~L~~A~~~~~~  238 (255)
T d1oy3d_         159 HTPLHVAVIHKDAEMVRLLRDAGADLNKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTARMYGGRTPLGSALLRPNP  238 (255)
T ss_dssp             CCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHTSSCH
T ss_pred             cccccccccccccccccchhcccccccccccccccccccccccccHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCH
Confidence            88888888888888888888888888877777777888888888888888888888888888888888888888888888


Q ss_pred             HHHHHHHHCCCC
Q psy903          237 AVVRVLLECGAN  248 (739)
Q Consensus       237 ~~v~~Ll~~~~~  248 (739)
                      +++++|+++||+
T Consensus       239 ~i~~~Ll~~Ga~  250 (255)
T d1oy3d_         239 ILARLLRAHGAP  250 (255)
T ss_dssp             HHHHHHHHTTCC
T ss_pred             HHHHHHHHcCCC
Confidence            888888888885

>d1oy3d_ d.211.1.1 (D:) Transcription factor inhibitor I-kappa-B-beta, IKBB {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Transcription factor inhibitor I-kappa-B-beta, IKBB
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=100.00  E-value=1.8e-33  Score=265.40  Aligned_cols=229  Identities=27%  Similarity=0.260  Sum_probs=134.8

Q ss_pred             ccCCCCCcHHHHHHhcCcHHHHHHHHHcccccc---ccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhc
Q psy903           26 ETTDEGESLLSLACSAGYYELAQVLLAMHANVE---DRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSC  102 (739)
Q Consensus        26 ~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~---~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (739)
                      -.+.+|+||||+||.+|+.+++++|+++|+++.   ..+..|. ||||+|+                             
T Consensus         4 ~i~~~G~t~Lh~A~~~~~~~~v~~Ll~~~a~~~~i~~~~~~g~-TpL~~A~-----------------------------   53 (255)
T d1oy3d_           4 YVTEDGDTALHLAVIHQHEPFLDFLLGFSAGHEYLDLQNDLGQ-TALHLAA-----------------------------   53 (255)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHHHTTSGGGGCCCTTSC-CHHHHHH-----------------------------
T ss_pred             cCCcCCCCHHHHHHHcCCHHHHHHHHHcCCCcccccCcCCCCC-CccchHH-----------------------------
Confidence            467899999999999999999999999999854   3333443 5555544                             


Q ss_pred             hHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCc
Q psy903          103 ALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANV  182 (739)
Q Consensus       103 ~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~  182 (739)
                                                   ..|+.+++++|++.|++++..|..|.||||+|+..++.+++++|++.+...
T Consensus        54 -----------------------------~~g~~~iv~~Ll~~ga~i~~~d~~g~tpL~~A~~~~~~~~~~~Ll~~~~~~  104 (255)
T d1oy3d_          54 -----------------------------ILGEASTVEKLYAAGAGVLVAERGGHTALHLACRVRAHTCACVLLQPRPSH  104 (255)
T ss_dssp             -----------------------------HHTCHHHHHHHHHTTCCSSCCCTTSCCHHHHHTTTTCHHHHHHHSSSCCSS
T ss_pred             -----------------------------hhcccccccccccccccccccccccchhhhhhhccCchHHHHHHHhhccch
Confidence                                         556899999999999999999999999999999999999999999877543


Q ss_pred             cccCCCCCCcHH---------HHHHHcCc----HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCC
Q psy903          183 EDRGIKGECTPL---------MEAASSGF----IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANV  249 (739)
Q Consensus       183 ~~~~~~~~~t~L---------~~A~~~~~----~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~  249 (739)
                      ............         ..+.....    ......+...+.+++.++..|.||||+|+..++.+++++|++++++.
T Consensus       105 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~~~~  184 (255)
T d1oy3d_         105 PRDASDTYLTQSQDCTPDTSHAPAAVDSQPNPENEEEPRDEDWRLQLEAENYDGHTPLHVAVIHKDAEMVRLLRDAGADL  184 (255)
T ss_dssp             CCCC-----------------------------------CCCGGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHTCCT
T ss_pred             hcccchhhhhHHhhhcccchHHHHHHHhhcchhHHHHHHhhhcCcccccccccCcccccccccccccccccchhcccccc
Confidence            322111100000         00000000    00111111223344445555555555555555555555555555444


Q ss_pred             CCC-CCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCC
Q psy903          250 EDH-NENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGA  314 (739)
Q Consensus       250 ~~~-~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~  314 (739)
                      +.. +..|.||||+|+..|+.+++++|+++|++++.. +..|.||||+|+..++.+++++|+++|+
T Consensus       185 ~~~~~~~g~TpL~~A~~~~~~~~v~~Ll~~gadin~~-d~~g~t~L~~A~~~~~~~i~~~Ll~~Ga  249 (255)
T d1oy3d_         185 NKPEPTCGRTPLHLAVEAQAASVLELLLKAGADPTAR-MYGGRTPLGSALLRPNPILARLLRAHGA  249 (255)
T ss_dssp             TCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHTSSCHHHHHHHHHTTC
T ss_pred             cccccccccccccccccccHHHHHHHHHHCCCCCCCC-CCCCCCHHHHHHHCCCHHHHHHHHHcCC
Confidence            432 334555555555555555555555555554432 2334555555555555555555555554

>d1wdya_ d.211.1.1 (A:) RNase L, 2-5a-dependent ribonuclease {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: RNase L, 2-5a-dependent ribonuclease
species: Human (Homo sapiens) [TaxId: 9606]

Probab=100.00  E-value=5.9e-32  Score=259.99  Aligned_cols=262  Identities=31%  Similarity=0.372  Sum_probs=231.1

Q ss_pred             CCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHH
Q psy903           30 EGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAA  109 (739)
Q Consensus        30 ~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  109 (739)
                      +++|+||.|+..|++++|++|+++|++++..+..+|.||||+|+..|                                 
T Consensus         4 ~~~~~L~~Ai~~~~~e~vk~Ll~~G~din~~~~~~g~tpL~~A~~~~---------------------------------   50 (285)
T d1wdya_           4 EDNHLLIKAVQNEDVDLVQQLLEGGANVNFQEEEGGWTPLHNAVQMS---------------------------------   50 (285)
T ss_dssp             HHHHHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTT---------------------------------
T ss_pred             CCcHHHHHHHHcCCHHHHHHHHHCCCCcCccCCCCCCCHHHHHHHcC---------------------------------
Confidence            46799999999999999999999999999887766667777766554                                 


Q ss_pred             HHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCC
Q psy903          110 ALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKG  189 (739)
Q Consensus       110 ~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~  189 (739)
                                               +.+++++|++.+......+..+.+|.++|+..+..+...++++...+....+ ..
T Consensus        51 -------------------------~~eiv~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~  104 (285)
T d1wdya_          51 -------------------------REDIVELLLRHGADPVLRKKNGATPFLLAAIAGSVKLLKLFLSKGADVNECD-FY  104 (285)
T ss_dssp             -------------------------CHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCTTCBC-TT
T ss_pred             -------------------------CHHHhhhhccccccccccccccchhhHHHhhcCCccccchhhhhcccccccc-cC
Confidence                                     7899999999999999999999999999999999999999999887665544 44


Q ss_pred             CCcHHHHHHHcCcHHHHHHHHHCCCCCCCC----------CCCCCcHHHHHHhcCcHHHHHHHHHC-CCCCCCCCCCCCc
Q psy903          190 ECTPLMEAASSGFIEIVRLLINHGADVNGQ----------SSSGNTPLMYACAGGHEAVVRVLLEC-GANVEDHNENGHT  258 (739)
Q Consensus       190 ~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~----------~~~~~t~L~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~t  258 (739)
                      +.++++.|+..++..+++.++....+++..          +..|.||||+|+.+|+.+++++|++. |++++..+..|.+
T Consensus       105 ~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~A~~~~~~~~~~~Ll~~~~~~i~~~~~~~~~  184 (285)
T d1wdya_         105 GFTAFMEAAVYGKVKALKFLYKRGANVNLRRKTKEDQERLRKGGATALMDAAEKGHVEVLKILLDEMGADVNACDNMGRN  184 (285)
T ss_dssp             CCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCCCCHHHHHTTCCCCCHHHHHHHHTCHHHHHHHHHTSCCCTTCCCTTSCC
T ss_pred             CCchhHHHHHhcchhhhhhhhhhcccccccccchhhhhhhcccCchHHHHHHHcCCHHHHHHHHhccCCCcccccCCCCc
Confidence            569999999999999999999887765533          45689999999999999999999975 8999999999999


Q ss_pred             HHHHHHhcC----ChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHc-CCCCCCCCCcCCcHHHHHHhC
Q psy903          259 PLMEAASAG----HVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSA-GADQEHKTDEMHTALMEASMD  333 (739)
Q Consensus       259 ~L~~A~~~~----~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~-~~~~~~~~~~~~~~l~~a~~~  333 (739)
                      ++..+...+    ..+++++|+++|++++.. +..|.||||.|+..|+.+++++|++. |++++..+..|.||||+|++.
T Consensus       185 ~~~~~~~~~~~~~~~~i~~~Li~~ga~~n~~-~~~g~t~L~~a~~~~~~~~v~~lL~~~g~din~~d~~G~TpL~~A~~~  263 (285)
T d1wdya_         185 ALIHALLSSDDSDVEAITHLLLDHGADVNVR-GERGKTPLILAVEKKHLGLVQRLLEQEHIEINDTDSDGKTALLLAVEL  263 (285)
T ss_dssp             HHHHHHHCSCTTTHHHHHHHHHHTTCCSSCC-CTTSCCHHHHHHHTTCHHHHHHHHHSSSCCTTCCCTTSCCHHHHHHHT
T ss_pred             ccccccccccchHHHHHHHHHHHCCCCCCcc-CCCCCCccchhhhcCcHHHHHHHHHcCCCCCcCCCCCCCCHHHHHHHc
Confidence            888776544    457999999999998875 55699999999999999999999985 899999999999999999999


Q ss_pred             CchHHHHHHHHcCCCchh
Q psy903          334 GHVEVAKLLLDSGAQSVS  351 (739)
Q Consensus       334 ~~~~~~~~L~~~~~~~~~  351 (739)
                      ++.+++++|+++|++++.
T Consensus       264 ~~~eiv~~Ll~~GAd~n~  281 (285)
T d1wdya_         264 KLKKIAELLCKRGASTDC  281 (285)
T ss_dssp             TCHHHHHHHHHHSSCSCC
T ss_pred             CCHHHHHHHHHCCCCCCc
Confidence            999999999999998653

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=100.00  E-value=6e-33  Score=256.92  Aligned_cols=221  Identities=28%  Similarity=0.351  Sum_probs=171.5

Q ss_pred             ChhhhhhcCCHHHHHHHHH-cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccc
Q psy903            1 SLVQACSDGDVKTVKKLLT-EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGK   79 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~-~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~   79 (739)
                      |||.||..|+.+.|+.|++ .+.+++.+|.+|+||||+|+..|+.+++++|+++|++++..+...               
T Consensus         3 pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~---------------   67 (229)
T d1ixva_           3 PLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPD---------------   67 (229)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCC---------------
T ss_pred             hHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhcccccccccc---------------
Confidence            7999999999999999998 567889999999999999999999999999999999886443211               


Q ss_pred             cccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCC--CCcCCCCCC
Q psy903           80 LATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRS--VHETTDEGE  157 (739)
Q Consensus        80 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~--~~~~~~~g~  157 (739)
                                                               ..+.++++.++..+..++++.++..+..  ....+..+.
T Consensus        68 -----------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  106 (229)
T d1ixva_          68 -----------------------------------------DSGWTPFHIACSVGNLEVVKSLYDRPLKPDLNKITNQGV  106 (229)
T ss_dssp             -----------------------------------------TTSCCHHHHHHHHTCHHHHHHHHSSSSCCCTTCCCTTSC
T ss_pred             -----------------------------------------ccccccccccccccccccccccccccccccccccccccc
Confidence                                                     1223444455555567777777777654  334556677


Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCC-CCCCCCCCCCCcHHHHHHhcCcH
Q psy903          158 SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG-ADVNGQSSSGNTPLMYACAGGHE  236 (739)
Q Consensus       158 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g-~~~~~~~~~~~t~L~~A~~~~~~  236 (739)
                      ++++.++..++.+++++|++.+......+.. |+||||+|+..|+.+++++|++.+ .+++.+|..|.||||+|+..|+.
T Consensus       107 ~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~-g~t~l~~a~~~~~~~~~~~Ll~~~~~~in~~d~~g~TpLh~A~~~~~~  185 (229)
T d1ixva_         107 TCLHLAVGKKWFEVSQFLIENGASVRIKDKF-NQIPLHRAASVGSLKLIELLCGLGKSAVNWQDKQGWTPLFHALAEGHG  185 (229)
T ss_dssp             CHHHHHHHTTCHHHHHHHHHTTCCSCCCCTT-SCCHHHHHHHHTCHHHHHHHHTTTCCCSCCCCTTSCCHHHHHHHTTCH
T ss_pred             cccccccccchhhhhhhhhhhcccccccCCC-CCCccchhhhcccccccccccccccccccccccccCCchhhhcccccH
Confidence            8888888888888888888888777665544 458888888888888888888876 56777888888888888888888


Q ss_pred             HHHHHHHH-CCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCC
Q psy903          237 AVVRVLLE-CGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAG  281 (739)
Q Consensus       237 ~~v~~Ll~-~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~  281 (739)
                      +++++|++ .|++++.+|.+|.|||++|+.   .+++++|+++|++
T Consensus       186 ~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         186 DAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             HHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             HHHHHHHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHHcCCC
Confidence            88888886 488888888888888888763   4677888887764

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=100.00  E-value=7e-33  Score=267.03  Aligned_cols=240  Identities=25%  Similarity=0.331  Sum_probs=177.6

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcccccc
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKL   80 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~   80 (739)
                      +|+.||..|++++|++||++|+++|..|.+|+||||+|+..|+.++|++|+++|++....+..+. |||           
T Consensus        43 ~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~T~L~~A~~~g~~eiv~~Ll~~~~~~~~~~~~~~-~~L-----------  110 (291)
T d1s70b_          43 VFLAACSSGDTEEVLRLLERGADINYANVDGLTALHQACIDDNVDMVKFLVENGANINQPDNEGW-IPL-----------  110 (291)
T ss_dssp             HHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHH-----------
T ss_pred             HHHHHHHcCCHHHHHHHHHCCCCCCccCCCCCcHHHHHHhcCCceeeeeeccccccccccccccc-ccc-----------
Confidence            48899999999999999999999999999999999999999999999999999988766554443 544           


Q ss_pred             ccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHH
Q psy903           81 ATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLL  160 (739)
Q Consensus        81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L  160 (739)
                                                                     +.|+..++.++++.|++.|...+..+..+.+++
T Consensus       111 -----------------------------------------------~~a~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~  143 (291)
T d1s70b_         111 -----------------------------------------------HAAASCGYLDIAEYLISQGAHVGAVNSEGDTPL  143 (291)
T ss_dssp             -----------------------------------------------HHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCHH
T ss_pred             -----------------------------------------------cccccccccchhhcccccCcccccccccCcccc
Confidence                                                           445555678899999999999999999999999


Q ss_pred             HHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHH
Q psy903          161 SLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR  240 (739)
Q Consensus       161 ~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~  240 (739)
                      ++|+..+..+.++.++........       .................+.....+....+..|.||||+|+..|+.++++
T Consensus       144 ~~a~~~~~~~~~~~ll~~~~~~~~-------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~  216 (291)
T d1s70b_         144 DIAEEEAMEELLQNEVNRQGVDIE-------AARKEEERIMLRDARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLK  216 (291)
T ss_dssp             HHCCSHHHHHHHHHHHHHHTCCHH-------HHHHHHHHHHHHHHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHH
T ss_pred             ccccccccchhccccccccccccc-------cccccccccccccchhhhcccccccccccCCCCChhhHHHHcCChhhhc
Confidence            999999999999888864322110       0111111111223334444455555566777778888888888888888


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHH
Q psy903          241 VLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLS  311 (739)
Q Consensus       241 ~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~  311 (739)
                      +|++.|++++.++..|.||||+|+..|+.+++++|+++|++++.. +..|.|||++|++    +++++|.+
T Consensus       217 ~Ll~~g~din~~~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv~~~-d~~G~TaL~~A~e----~~~~~L~~  282 (291)
T d1s70b_         217 LLIQARYDVNIKDYDGWTPLHAAAHWGKEEACRILVENLCDMEAV-NKVGQTAFDVADE----DILGYLEE  282 (291)
T ss_dssp             HHHTTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCTTTSCCS----GGGHHHHH
T ss_pred             ccccceecccccccCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCc-CCCCCCHHHHHHH----HHHHHHHH
Confidence            888877777777777788888888888888888888887777664 4557788887764    45555544

>d1ixva_ d.211.1.1 (A:) 26S proteasome non-ATPase regulatory subunit 10, gankyrin {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 26S proteasome non-ATPase regulatory subunit 10, gankyrin
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.97  E-value=9.3e-31  Score=242.08  Aligned_cols=221  Identities=25%  Similarity=0.262  Sum_probs=199.8

Q ss_pred             hHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCcccc--CCCCCCcHHHHHHHcC
Q psy903          125 RSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDR--GIKGECTPLMEAASSG  201 (739)
Q Consensus       125 ~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~--~~~~~~t~L~~A~~~~  201 (739)
                      +|||+||..|+.++++.|++. +.+++.+|.+|.||||+|+..|+.+++++|+++|++++..  ....+.+|+++|+..+
T Consensus         2 ~pLh~A~~~g~~~~v~~Ll~~~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~   81 (229)
T d1ixva_           2 YPLHQACMENEFFKVQELLHSKPSLLLQKDQDGRIPLHWSVSFQAHEITSFLLSKMENVNLDDYPDDSGWTPFHIACSVG   81 (229)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHHCGGGTTCCCTTSCCHHHHHHHTTCHHHHHHHHTTCTTCCGGGCCCTTSCCHHHHHHHHT
T ss_pred             HhHHHHHHcCCHHHHHHHHHcCCCcccccCCCCCCHHHHHHHcCCccccchhhhhhcccccccccccccccccccccccc
Confidence            799999999999999999985 5789999999999999999999999999999999887643  4456789999999999


Q ss_pred             cHHHHHHHHHCCCCC--CCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcC
Q psy903          202 FIEIVRLLINHGADV--NGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYG  279 (739)
Q Consensus       202 ~~~~~~~Ll~~g~~~--~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~  279 (739)
                      ..++++.++..+...  ...+..+.|+++.++..++.+++++|++.|.+.+..+..|.||||+|+..|+.+++++|++.+
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~g~t~l~~a~~~~~~~~~~~Ll~~~  161 (229)
T d1ixva_          82 NLEVVKSLYDRPLKPDLNKITNQGVTCLHLAVGKKWFEVSQFLIENGASVRIKDKFNQIPLHRAASVGSLKLIELLCGLG  161 (229)
T ss_dssp             CHHHHHHHHSSSSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHHTTT
T ss_pred             ccccccccccccccccccccccccccccccccccchhhhhhhhhhhcccccccCCCCCCccchhhhcccccccccccccc
Confidence            999999999887654  456778899999999999999999999999999999999999999999999999999999998


Q ss_pred             CCCcccCcCccCCHHHHHHHcCCHHHHHHHHH-cCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHcCCC
Q psy903          280 AGINTHSNEFKESALTLACYKGHLDMVRFLLS-AGADQEHKTDEMHTALMEASMDGHVEVAKLLLDSGAQ  348 (739)
Q Consensus       280 ~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~-~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~~~~  348 (739)
                      .......+..|.||||+|+..|+.+++++|++ .|++++.++..|.|||++|+.   .+++++|+++|++
T Consensus       162 ~~~in~~d~~g~TpLh~A~~~~~~~~v~~Ll~~~gad~~~~d~~g~t~l~~A~~---~~~~~~Ll~~g~d  228 (229)
T d1ixva_         162 KSAVNWQDKQGWTPLFHALAEGHGDAAVLLVEKYGAEYDLVDNKGAKAEDVALN---EQVKKFFLNNVVD  228 (229)
T ss_dssp             CCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHHHCCCSCCCCTTSCCTGGGCSC---HHHHHHHHHHCCC
T ss_pred             cccccccccccCCchhhhcccccHHHHHHHHHhcCCCCCCcCCCCCCHHHHHhh---HHHHHHHHHcCCC
Confidence            54444456679999999999999999999997 599999999999999999873   5899999999875

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=2.4e-31  Score=254.51  Aligned_cols=205  Identities=22%  Similarity=0.284  Sum_probs=139.4

Q ss_pred             HHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCC---CC
Q psy903          139 VKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHG---AD  215 (739)
Q Consensus       139 ~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g---~~  215 (739)
                      .+.+++.|+++|.+|..|.||||+|+..|+.++|++|+++|++++..+.. |.||++.|+..++.++++++...+   ..
T Consensus        57 ~~~~l~~Gadvn~~d~~G~TpLh~A~~~g~~~iv~~Ll~~Gad~n~~~~~-g~t~l~~a~~~~~~~~~~~l~~~~~~~~~  135 (277)
T d2fo1e1          57 AKECIAAGADVNAMDCDENTPLMLAVLARRRRLVAYLMKAGADPTIYNKS-ERSALHQAAANRDFGMMVYMLNSTKLKGD  135 (277)
T ss_dssp             HHHHHHTCCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCSCCCCTT-CCCHHHHHHHTTCHHHHHHHTTSHHHHHT
T ss_pred             hhHHHHcCCCccccCCCCCeeecccccccccccccccccccccccccccc-ccccccchhhhcchhhhhhhhhccccccc
Confidence            34566677777777777777777777777777777777777776665433 457777777777777777766542   34


Q ss_pred             CCCCCCCCCcHHHHHHhcCcH---HHHHHHHHCC--------CCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcc
Q psy903          216 VNGQSSSGNTPLMYACAGGHE---AVVRVLLECG--------ANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINT  284 (739)
Q Consensus       216 ~~~~~~~~~t~L~~A~~~~~~---~~v~~Ll~~~--------~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~  284 (739)
                      ++..+..+.++.+.+...+..   ..+..+.+..        ...+..+..|.|||++++..++.+++++++........
T Consensus       136 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~  215 (277)
T d2fo1e1         136 IEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYDGAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKD  215 (277)
T ss_dssp             TSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCCSGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTT
T ss_pred             ccccccccchhHHHHHhcccccccccccccccccccccccccccccccccCCCCcccccccccccccccccccccccccc
Confidence            455666677777777765543   3333443322        12234556677788888888887777765544333333


Q ss_pred             cCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHH
Q psy903          285 HSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLD  344 (739)
Q Consensus       285 ~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~  344 (739)
                      ..+..|.||||+|+..|+.+++++|+++|++++.+|..|.|||++|+..|+.+++++|.+
T Consensus       216 ~~d~~g~tpL~~A~~~g~~~iv~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~  275 (277)
T d2fo1e1         216 KQDEDGKTPIMLAAQEGRIEVVMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDR  275 (277)
T ss_dssp             CCCTTCCCHHHHHHHHTCHHHHHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHT
T ss_pred             ccCCCCCCHHHHHHHcCCHHHHHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHH
Confidence            345557788888888888888888888888888888888888888888888888887764

>d2fo1e1 d.211.1.1 (E:1021-1297) Lin-12 {Caenorhabditis elegans [TaxId: 6239]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Lin-12
species: Caenorhabditis elegans [TaxId: 6239]

Probab=99.97  E-value=2.2e-30  Score=247.77  Aligned_cols=262  Identities=29%  Similarity=0.340  Sum_probs=175.9

Q ss_pred             cHHHHHHH-cCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHH--------HHCCCCCCCCCCCCCcHHH
Q psy903          158 SLLSLACS-AGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLL--------INHGADVNGQSSSGNTPLM  228 (739)
Q Consensus       158 t~L~~A~~-~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~L--------l~~g~~~~~~~~~~~t~L~  228 (739)
                      ||||+++. .|..++++.|.+.+.+...  ...|+||||+|+..|+.+++++|        ++.|+++|.+|..|+||||
T Consensus         2 ~p~~~~~~~~~~~~~~~~l~~~~~n~~~--~~~g~T~Lh~A~~~g~~~~v~~Ll~~~~~~~l~~Gadvn~~d~~G~TpLh   79 (277)
T d2fo1e1           2 SPIKLHTEAAGSYAITEPITRESVNIID--PRHNRTVLHWIASNSSAEKSEDLIVHEAKECIAAGADVNAMDCDENTPLM   79 (277)
T ss_dssp             CCCHHHHHHHSSSCCCSCCSTTTTTTCC--CSSCCCHHHHHHCTTCCSCCTTHHHHHHHHHHHTCCCTTCCCTTSCCHHH
T ss_pred             ChHHHHHHhCCCHHHHHHHHhcCCCcCC--CCCCccHHHHHHHcCCHHHHHHHHhcchhHHHHcCCCccccCCCCCeeec
Confidence            67775543 4667777777776665433  33466888888888887777665        4567788888888888888


Q ss_pred             HHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHH
Q psy903          229 YACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRF  308 (739)
Q Consensus       229 ~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~  308 (739)
                      +|+..|+.+++++|+++|++++.++.+|.|||++|+..++.++++++...+...                          
T Consensus        80 ~A~~~g~~~iv~~Ll~~Gad~n~~~~~g~t~l~~a~~~~~~~~~~~l~~~~~~~--------------------------  133 (277)
T d2fo1e1          80 LAVLARRRRLVAYLMKAGADPTIYNKSERSALHQAAANRDFGMMVYMLNSTKLK--------------------------  133 (277)
T ss_dssp             HHHHHTCHHHHHHHHHTTCCSCCCCTTCCCHHHHHHHTTCHHHHHHHTTSHHHH--------------------------
T ss_pred             cccccccccccccccccccccccccccccccccchhhhcchhhhhhhhhccccc--------------------------
Confidence            888888888888888888888777777788888877777777777765432100                          


Q ss_pred             HHHcCCCCCCCCCcCCcHHHHHHhCCchH---HHHHHHHcCCCchhhhcccCCCCCCCCCCCCCcccccchHHHHHHhcC
Q psy903          309 LLSAGADQEHKTDEMHTALMEASMDGHVE---VAKLLLDSGAQSVSAYARHDFFPNDKCERPSSISYTYSRSLVQACSDG  385 (739)
Q Consensus       309 Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~---~~~~L~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~  385 (739)
                           ..++..+....++.+.+...+..+   .+..+.+........                                 
T Consensus       134 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------------------------------  175 (277)
T d2fo1e1         134 -----GDIEELDRNGMTALMIVAHNEGRDQVASAKLLVEKGAKVDYD---------------------------------  175 (277)
T ss_dssp             -----HTTSCCCTTSCCHHHHHHHSCSTTHHHHHHHHHHHTCCSSCC---------------------------------
T ss_pred             -----ccccccccccchhHHHHHhccccccccccccccccccccccc---------------------------------
Confidence                 112233344445555555444332   222222221110000                                 


Q ss_pred             CHHHHHHHHHCCCCCccCCCCCCCHHHHHHHcCcHHHHHHHHHcC-CCcccccCCCCCcHHHHHHHcCCccchhhHHHhh
Q psy903          386 DVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMH-ANVEDRGIKGECTPLMEAASSGRQCNLNESVSAY  464 (739)
Q Consensus       386 ~~~~~~~Ll~~~~~~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~-~~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~  464 (739)
                                .....+..+..|.|+|+.++..++.+++++++... .+...                             
T Consensus       176 ----------~~~~~~~~~~~g~t~L~~~~~~~~~~~~~~~l~~~~~~~~~-----------------------------  216 (277)
T d2fo1e1         176 ----------GAARKDSEKYKGRTALHYAAQVSNMPIVKYLVGEKGSNKDK-----------------------------  216 (277)
T ss_dssp             ----------SGGGTSSSSCCCCCTHHHHHSSCCHHHHHHHHHHSCCCTTC-----------------------------
T ss_pred             ----------ccccccccccCCCCccccccccccccccccccccccccccc-----------------------------
Confidence                      00112334556777788777777777777655432 21111                             


Q ss_pred             hccCCCCCCcccccchhhhhhccCccccccCcCCCCCHHHHHHhcCCHHHHHHHHHcCCCCCCCCCcHHHHHHHcCcHHH
Q psy903          465 ARHDFFPNDKSVNGLQASVILIPGAKINAHTEETQETALTLACCGGFLDVADFLLKNGANIELGASTPLMEAAQEGHLEL  544 (739)
Q Consensus       465 ~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~t~L~~A~~~~~~~~  544 (739)
                                                                                  .+..|.||||+|+..|+.++
T Consensus       217 ------------------------------------------------------------~d~~g~tpL~~A~~~g~~~i  236 (277)
T d2fo1e1         217 ------------------------------------------------------------QDEDGKTPIMLAAQEGRIEV  236 (277)
T ss_dssp             ------------------------------------------------------------CCTTCCCHHHHHHHHTCHHH
T ss_pred             ------------------------------------------------------------cCCCCCCHHHHHHHcCCHHH
Confidence                                                                        13457899999999999999


Q ss_pred             HHHHHHCCCCCCCCCCCCCcHHHHHHHcCcHHHHHHHHhC
Q psy903          545 VRYLLDSGAQVHAKTQTGDTALTYACENGHTDVADLLLSY  584 (739)
Q Consensus       545 v~~Ll~~g~~~~~~d~~g~t~l~~A~~~~~~~iv~~Ll~~  584 (739)
                      +++|+++|++++.+|.+|+||||+|++.|+.++|++|++.
T Consensus       237 v~~Ll~~gadin~~d~~G~T~L~~A~~~~~~~iv~lL~~c  276 (277)
T d2fo1e1         237 VMYLIQQGASVEAVDATDHTARQLAQANNHHNIVDIFDRC  276 (277)
T ss_dssp             HHHHHHTTCCSSCCCSSSCCHHHHHHHTTCHHHHHHHHTT
T ss_pred             HHHHHHCcCCCCCcCCCCCCHHHHHHHcCCHHHHHHHHHh
Confidence            9999999999999999999999999999999999999874

>d1s70b_ d.211.1.1 (B:) Myosin phosphatase targeting subunit 1, MYPT1 {Chicken (Gallus gallus) [TaxId: 9031]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myosin phosphatase targeting subunit 1, MYPT1
species: Chicken (Gallus gallus) [TaxId: 9031]

Probab=99.97  E-value=7.1e-30  Score=245.80  Aligned_cols=266  Identities=23%  Similarity=0.242  Sum_probs=213.6

Q ss_pred             hcCCHHHHHHHHHcCCCCccc---------CCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccc
Q psy903            7 SDGDVKTVKKLLTEGRSVHET---------TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF   77 (739)
Q Consensus         7 ~~g~~~~v~~ll~~g~~~~~~---------~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~   77 (739)
                      +....+.++.++....+.+.+         +.+|.|||+.||..|+.++|++||++|++++..|..|. ||||+|+..  
T Consensus         7 ~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~t~l~~A~~~G~~~~v~~Ll~~Gadvn~~d~~G~-T~L~~A~~~--   83 (291)
T d1s70b_           7 KQKRNEQLKRWIGSETDLEPPVVKRKKTKVKFDDGAVFLAACSSGDTEEVLRLLERGADINYANVDGL-TALHQACID--   83 (291)
T ss_dssp             HHHHHHHHHHHHHTTTSSCCSCCCCSCCCCEECHHHHHHHHHHHTCHHHHHHHHHHCCCTTCBCTTCC-BHHHHHHHT--
T ss_pred             hHhhHHHHHHHHhCcccccCchhhccccccCCCCchHHHHHHHcCCHHHHHHHHHCCCCCCccCCCCC-cHHHHHHhc--
Confidence            334456677777655544322         23466999999999999999999999999998887775 777776655  


Q ss_pred             cccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCC
Q psy903           78 GKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGE  157 (739)
Q Consensus        78 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~  157 (739)
                                                                              |+.+++++|+++|.+....+..+.
T Consensus        84 --------------------------------------------------------g~~eiv~~Ll~~~~~~~~~~~~~~  107 (291)
T d1s70b_          84 --------------------------------------------------------DNVDMVKFLVENGANINQPDNEGW  107 (291)
T ss_dssp             --------------------------------------------------------TCHHHHHHHHHTTCCTTCCCTTSC
T ss_pred             --------------------------------------------------------CCceeeeeeccccccccccccccc
Confidence                                                                    478999999999999999999999


Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHhcCcH
Q psy903          158 SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINH-GADVNGQSSSGNTPLMYACAGGHE  236 (739)
Q Consensus       158 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~L~~A~~~~~~  236 (739)
                      +||++|+..++.++++.|+++|......+.. +.+++++|+..+..++++.++.. +.++.       ............
T Consensus       108 ~~L~~a~~~~~~~~~~~l~~~~~~~~~~~~~-~~~~~~~a~~~~~~~~~~~ll~~~~~~~~-------~~~~~~~~~~~~  179 (291)
T d1s70b_         108 IPLHAAASCGYLDIAEYLISQGAHVGAVNSE-GDTPLDIAEEEAMEELLQNEVNRQGVDIE-------AARKEEERIMLR  179 (291)
T ss_dssp             CHHHHHHHHTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHCCSHHHHHHHHHHHHHHTCCHH-------HHHHHHHHHHHH
T ss_pred             ccccccccccccchhhcccccCccccccccc-Cccccccccccccchhccccccccccccc-------cccccccccccc
Confidence            9999999999999999999999887766654 46999999999999999999864 33221       111111111233


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCC
Q psy903          237 AVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQ  316 (739)
Q Consensus       237 ~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~  316 (739)
                      .....+.....+....+..|.|||+.|+..|+.+++++|++.|++++.. +..|.||||+|+..|+.++|++|+++|+++
T Consensus       180 ~~~~~~~~~~~~~~~~~~~g~t~L~~a~~~~~~~~~~~Ll~~g~din~~-~~~g~TpL~~A~~~g~~~iv~lLl~~Gadv  258 (291)
T d1s70b_         180 DARQWLNSGHINDVRHAKSGGTALHVAAAKGYTEVLKLLIQARYDVNIK-DYDGWTPLHAAAHWGKEEACRILVENLCDM  258 (291)
T ss_dssp             HHHHHHHHTCCCCCCCTTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCC-CTTCCCHHHHHHHTTCHHHHHHHHHTTCCT
T ss_pred             cchhhhcccccccccccCCCCChhhHHHHcCChhhhcccccceeccccc-ccCCCCHHHHHHHcCCHHHHHHHHHCCCCC
Confidence            4445556666667778889999999999999999999999999998875 455999999999999999999999999999


Q ss_pred             CCCCCcCCcHHHHHHhCCchHHHHHHHH
Q psy903          317 EHKTDEMHTALMEASMDGHVEVAKLLLD  344 (739)
Q Consensus       317 ~~~~~~~~~~l~~a~~~~~~~~~~~L~~  344 (739)
                      +.+|..|.|||++|++    +++++|.+
T Consensus       259 ~~~d~~G~TaL~~A~e----~~~~~L~~  282 (291)
T d1s70b_         259 EAVNKVGQTAFDVADE----DILGYLEE  282 (291)
T ss_dssp             TCCCTTSCCTTTSCCS----GGGHHHHH
T ss_pred             CCcCCCCCCHHHHHHH----HHHHHHHH
Confidence            9999999999999975    45555554

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.96  E-value=2.1e-29  Score=229.14  Aligned_cols=205  Identities=24%  Similarity=0.308  Sum_probs=152.9

Q ss_pred             HHHHHHHHHcCCCCcc-cCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCC
Q psy903           11 VKTVKKLLTEGRSVHE-TTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLAD   89 (739)
Q Consensus        11 ~~~v~~ll~~g~~~~~-~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~   89 (739)
                      -|+|+.|+++|+++|. .|.+|+||||+||..|+.+++++|+++|++++..+..+. ++++.++..+             
T Consensus         2 ~~~v~~Ll~~g~din~~~d~~G~t~L~~A~~~g~~e~v~~Ll~~g~~~n~~~~~~~-~~~~~~~~~~-------------   67 (209)
T d1ot8a_           2 AQVISDLLAQGAELNATMDKTGETSLHLAARFARADAAKRLLDAGADANSQDNTGR-TPLHAAVAAD-------------   67 (209)
T ss_dssp             HHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHTT-------------
T ss_pred             HHHHHHHHHCCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHhhcccccccccccc-cccccccccc-------------
Confidence            3799999999999997 589999999999999999999999999999998887775 8888877665             


Q ss_pred             HHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcC-CCCCcCCCCCCcHHHHHHHcCc
Q psy903           90 PEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEG-RSVHETTDEGESLLSLACSAGY  168 (739)
Q Consensus        90 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~-~~~~~~~~~g~t~L~~A~~~~~  168 (739)
                                                                   +........... .........+.++.+.+.....
T Consensus        68 ---------------------------------------------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  102 (209)
T d1ot8a_          68 ---------------------------------------------AMGVFQILLRNRATNLNARMHDGTTPLILAARLAI  102 (209)
T ss_dssp             ---------------------------------------------CHHHHHHHHTCTTCCTTCCCTTCCCHHHHHHHTTC
T ss_pred             ---------------------------------------------ccccccccccccccccccccccccccccccccccc
Confidence                                                         222222222221 2222334456667777777777


Q ss_pred             HHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCC
Q psy903          169 YELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGAN  248 (739)
Q Consensus       169 ~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~  248 (739)
                      ....+.|.+.+++++..+.. |.|||+.|+..+..++++.+++.+.+++..|..|.||||+|+..|+.+++++|+++|++
T Consensus       103 ~~~~~~L~~~~~~~~~~~~~-~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad  181 (209)
T d1ot8a_         103 EGMVEDLITADADINAADNS-GKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFAN  181 (209)
T ss_dssp             TTHHHHHHHTTCCTTCBCTT-SCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCC
T ss_pred             hhhhhhhhhhcccccccCCC-CCCcchhhcccCcceeeeeeccccccccccccccccccchhccccHHHHHHHHHHCCCC
Confidence            77777777777766655433 35777777777777777777777777777777777777777777777777777777777


Q ss_pred             CCCCCCCCCcHHHHHHhcCChHHHHHH
Q psy903          249 VEDHNENGHTPLMEAASAGHVGVAKIL  275 (739)
Q Consensus       249 ~~~~~~~~~t~L~~A~~~~~~~ii~~L  275 (739)
                      ++.+|..|.||||+|+++|+.+++++|
T Consensus       182 ~n~~d~~g~Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         182 REITDHMDRLPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             TTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             CCCcCCCCCCHHHHHHHcCCHHHHhhc
Confidence            777777777777777777777777765

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.2e-29  Score=232.09  Aligned_cols=193  Identities=26%  Similarity=0.281  Sum_probs=153.7

Q ss_pred             CCCcHHHHHHhcCcH----HHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhhchHH
Q psy903           30 EGESLLSLACSAGYY----ELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVSCALD  105 (739)
Q Consensus        30 ~g~t~L~~A~~~~~~----~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  105 (739)
                      +|+||||+|+..|+.    ++++++...|++++..|..|. ||||+|+..|                             
T Consensus         1 dG~t~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~-TpLh~A~~~~-----------------------------   50 (221)
T d1iknd_           1 DGDSFLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQ-TPLHLAVITN-----------------------------   50 (221)
T ss_dssp             CCCCTTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCC-CHHHHHHHTT-----------------------------
T ss_pred             CCChHHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCC-cccccccccc-----------------------------
Confidence            588999999988885    455566677888887777665 7776666544                             


Q ss_pred             HHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccc-
Q psy903          106 EAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVED-  184 (739)
Q Consensus       106 ~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~-  184 (739)
                                                   +.+++++|++.|++++..+..|.|||++|+..|+.++++.|++.+..... 
T Consensus        51 -----------------------------~~~iv~~L~~~g~d~~~~d~~g~t~l~~~~~~~~~~~~~~l~~~~~~~~~~  101 (221)
T d1iknd_          51 -----------------------------QPEIAEALLGAGCDPELRDFRGNTPLHLACEQGCLASVGVLTQSCTTPHLH  101 (221)
T ss_dssp             -----------------------------CHHHHHCCCSCCCCSCCCCTTCCCHHHHHHHHTCHHHHHHHHHSTTTTSSS
T ss_pred             -----------------------------ccccccccccccccccccccccccccccccccccccccchhhhhccccccc
Confidence                                         67888888888999988888899999999999999999999887654322 


Q ss_pred             ----cCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCC-CCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcH
Q psy903          185 ----RGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQS-SSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTP  259 (739)
Q Consensus       185 ----~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~-~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~  259 (739)
                          .....+.|||+.|+..++.+++++|+..|+.++..+ ..|.||||+|+..|+.+++++|+++|++++.+|.+|.||
T Consensus       102 ~~~~~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tp  181 (221)
T d1iknd_         102 SILKATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSP  181 (221)
T ss_dssp             CGGGCCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCG
T ss_pred             ccccccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCCH
Confidence                223335689999999999999999998888887665 568999999999999999999999999999999999999


Q ss_pred             HHHHHhcCChHHHHHHHHcCCC
Q psy903          260 LMEAASAGHVGVAKILLEYGAG  281 (739)
Q Consensus       260 L~~A~~~~~~~ii~~Ll~~~~~  281 (739)
                      ||+|+..++.+++++|++.+.+
T Consensus       182 l~~A~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         182 YQLTWGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             GGGCTTSSCHHHHHHHHTTSCG
T ss_pred             HHHHHHCCCHHHHHHHHHcCCc
Confidence            9999999999999999887554

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=1.1e-28  Score=228.54  Aligned_cols=214  Identities=26%  Similarity=0.359  Sum_probs=138.3

Q ss_pred             ChhhhhhcCCHHHHHHHHH----cCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcc
Q psy903            1 SLVQACSDGDVKTVKKLLT----EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG   76 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~----~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~   76 (739)
                      |||.||..|+.++|+.|++    .|+++|.+|..|+||||+|+..|+.+++++|+++|++.+.....+. ++++.|...+
T Consensus         6 pLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~-~~~~~a~~~~   84 (228)
T d1k1aa_           6 PLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHGQ-TAAHLACEHR   84 (228)
T ss_dssp             HHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSC-CHHHHHHHTT
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhcccccccccccccccccccccccccc-cccccccccc
Confidence            5666666666666666653    5666666666666777777666666677666666666655554443 4444444333


Q ss_pred             ccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcC----CCCCcC
Q psy903           77 FGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEG----RSVHET  152 (739)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~----~~~~~~  152 (739)
                                                                                +.+.++.+....    ...+..
T Consensus        85 ----------------------------------------------------------~~~~~~~~~~~~~~~~~~~~~~  106 (228)
T d1k1aa_          85 ----------------------------------------------------------SPTCLRALLDSAAPGTLDLEAR  106 (228)
T ss_dssp             ----------------------------------------------------------CHHHHHHHHHHSCTTSCCTTCC
T ss_pred             ----------------------------------------------------------cccchhhhhhcccccccccccc
Confidence                                                                      344444443322    223334


Q ss_pred             CCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHh
Q psy903          153 TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACA  232 (739)
Q Consensus       153 ~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~  232 (739)
                      .....++|+.+.........+.|.....+........+.++++.|+..+..+++++++++|.+++.+|..|.||||+|+.
T Consensus       107 ~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~d~~g~t~L~~A~~  186 (228)
T d1k1aa_         107 NYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQLLLQHGANVNAQMYSGSSALHSASG  186 (228)
T ss_dssp             CTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCBCTTSCBHHHHHHH
T ss_pred             ccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhhhhhhhccccccccccCcchHHHHHH
Confidence            44556677777777777777777766666655555566677777777777777777777777777777777777777777


Q ss_pred             cCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHH
Q psy903          233 GGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAK  273 (739)
Q Consensus       233 ~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~  273 (739)
                      .|+.+++++|+++|++++.+|.+|.||||+|+++|+.+++|
T Consensus       187 ~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~~divk  227 (228)
T d1k1aa_         187 RGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDILR  227 (228)
T ss_dssp             HTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHHT
T ss_pred             cCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCccccC
Confidence            77777777777777777777777777777777777666654

>d1iknd_ d.211.1.1 (D:) I-kappa-B-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: I-kappa-B-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.96  E-value=2e-29  Score=230.64  Aligned_cols=189  Identities=23%  Similarity=0.261  Sum_probs=163.3

Q ss_pred             ChhhhhhcCCH----HHHHHHHHcCCCCcccCCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhcc
Q psy903            1 SLVQACSDGDV----KTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSG   76 (739)
Q Consensus         1 ~L~~A~~~g~~----~~v~~ll~~g~~~~~~~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~   76 (739)
                      |||.|+..|+.    ++++.+...|+++|..|.+|+||||+|+..|+.+++++|+++|++++..+..+. |||+.++..+
T Consensus         5 ~Lh~A~~~g~~~~~~~li~~~~~~~~~in~~d~~g~TpLh~A~~~~~~~iv~~L~~~g~d~~~~d~~g~-t~l~~~~~~~   83 (221)
T d1iknd_           5 FLHLAIIHEEKALTMEVIRQVKGDLAFLNFQNNLQQTPLHLAVITNQPEIAEALLGAGCDPELRDFRGN-TPLHLACEQG   83 (221)
T ss_dssp             TTHHHHHTTCSSSSSCCCC-----CCCCCCCCTTCCCHHHHHHHTTCHHHHHCCCSCCCCSCCCCTTCC-CHHHHHHHHT
T ss_pred             HHHHHHHcCCHHHHHHHHHHHHhCCCCcccCCCCCCccccccccccccccccccccccccccccccccc-cccccccccc
Confidence            79999999996    455566678999999999999999999999999999999999999998887765 7777777655


Q ss_pred             ccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCC------C
Q psy903           77 FGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSV------H  150 (739)
Q Consensus        77 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~------~  150 (739)
                                                                                +.++++.+++.+.+.      .
T Consensus        84 ----------------------------------------------------------~~~~~~~l~~~~~~~~~~~~~~  105 (221)
T d1iknd_          84 ----------------------------------------------------------CLASVGVLTQSCTTPHLHSILK  105 (221)
T ss_dssp             ----------------------------------------------------------CHHHHHHHHHSTTTTSSSCGGG
T ss_pred             ----------------------------------------------------------cccccchhhhhccccccccccc
Confidence                                                                      567788888776542      2


Q ss_pred             cCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903          151 ETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYA  230 (739)
Q Consensus       151 ~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A  230 (739)
                      .....|.||||.|+..++.+++++|++.|+..+..+...|.||||+|+..|+.+++++|+++|+|++.+|..|.||||+|
T Consensus       106 ~~~~~~~t~l~~a~~~~~~~~~~~l~~~~~~~~~~~~~~G~T~L~~A~~~g~~~~v~~Ll~~gad~~~~~~~G~tpl~~A  185 (221)
T d1iknd_         106 ATNYNGHTCLHLASIHGYLGIVELLVSLGADVNAQEPCNGRTALHLAVDLQNPDLVSLLLKCGADVNRVTYQGYSPYQLT  185 (221)
T ss_dssp             CCCTTCCCHHHHHHHTTCHHHHHHHHHHTCCTTCCCTTTCCCHHHHHHHTTCHHHHHHHHTTTCCSCCCCTTCCCGGGGC
T ss_pred             ccccccchhhhHHhhcCChhheeeecccCcccccccccCCCCccccccccccHHHHHHHHhcCCcccccCCCCCCHHHHH
Confidence            34455889999999999999999999999999988888889999999999999999999999999999999999999999


Q ss_pred             HhcCcHHHHHHHHHCCCC
Q psy903          231 CAGGHEAVVRVLLECGAN  248 (739)
Q Consensus       231 ~~~~~~~~v~~Ll~~~~~  248 (739)
                      +..++.+++++|++.+.+
T Consensus       186 ~~~~~~~~~~~l~~~~~~  203 (221)
T d1iknd_         186 WGRPSTRIQQQLGQLTLE  203 (221)
T ss_dssp             TTSSCHHHHHHHHTTSCG
T ss_pred             HHCCCHHHHHHHHHcCCc
Confidence            999999999999987644

>d1ot8a_ d.211.1.1 (A:) Neurogenic locus notch receptor domain {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Neurogenic locus notch receptor domain
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=99.95  E-value=2.6e-27  Score=215.18  Aligned_cols=177  Identities=28%  Similarity=0.354  Sum_probs=137.0

Q ss_pred             HcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHH
Q psy903          132 SDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLIN  211 (739)
Q Consensus       132 ~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~  211 (739)
                      ..|+.+++++|++.|++++..+..+.++++.++..++.....................+.++.+.+.......+.+.|..
T Consensus        32 ~~g~~e~v~~Ll~~g~~~n~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~L~~  111 (209)
T d1ot8a_          32 RFARADAAKRLLDAGADANSQDNTGRTPLHAAVAADAMGVFQILLRNRATNLNARMHDGTTPLILAARLAIEGMVEDLIT  111 (209)
T ss_dssp             HTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHTCTTCCTTCCCTTCCCHHHHHHHTTCTTHHHHHHH
T ss_pred             HcCCHHHHHHHHhhccccccccccccccccccccccccccccccccccccccccccccccccccccccccchhhhhhhhh
Confidence            34477888888888888888888888888888888877777777666655555555556677777777777888888888


Q ss_pred             CCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccC
Q psy903          212 HGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKE  291 (739)
Q Consensus       212 ~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~  291 (739)
                      .+++++.++..|.|||++++..+..++++.+++.+.+++..|..|.||||+|+..|+.+++++|+++|++++.. +..|.
T Consensus       112 ~~~~~~~~~~~~~t~l~~~~~~~~~~~~~~l~~~~~~~~~~d~~g~TpL~~A~~~g~~~~v~~Ll~~gad~n~~-d~~g~  190 (209)
T d1ot8a_         112 ADADINAADNSGKTALHWAAAVNNTEAVNILLMHHANRDAQDDKDETPLFLAAREGSYEASKALLDNFANREIT-DHMDR  190 (209)
T ss_dssp             TTCCTTCBCTTSCBHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSC
T ss_pred             hcccccccCCCCCCcchhhcccCcceeeeeeccccccccccccccccccchhccccHHHHHHHHHHCCCCCCCc-CCCCC
Confidence            88888888888888888888888888888888888888888888888888888888888888888888777654 44577


Q ss_pred             CHHHHHHHcCCHHHHHHH
Q psy903          292 SALTLACYKGHLDMVRFL  309 (739)
Q Consensus       292 ~~l~~A~~~~~~~~v~~L  309 (739)
                      ||||+|++.|+.++|++|
T Consensus       191 Tpl~~A~~~~~~~iv~lL  208 (209)
T d1ot8a_         191 LPRDVASERLHHDIVRLL  208 (209)
T ss_dssp             CHHHHHHHTTCHHHHHHH
T ss_pred             CHHHHHHHcCCHHHHhhc
Confidence            888888888888888765

>d1k1aa_ d.211.1.1 (A:) bcl-3 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: bcl-3
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.94  E-value=4.9e-26  Score=210.57  Aligned_cols=215  Identities=25%  Similarity=0.331  Sum_probs=113.5

Q ss_pred             CchHHHHHHHcCCHHHHHHHHh----cCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHH
Q psy903          123 NERSLVQACSDGDVKTVKKLLT----EGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA  198 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~----~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~  198 (739)
                      |.||||.||..|+.++++.|++    .|++++..|..|.||||+|+..|+.+++++|+++|++.+.....+ .++++.|.
T Consensus         3 G~TpLh~A~~~g~~~~v~~Ll~~~~~~g~~in~~d~~g~TpL~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~-~~~~~~a~   81 (228)
T d1k1aa_           3 GDTPLHIAVVQGNLPAVHRLVNLFQQGGRELDIYNNLRQTPLHLAVITTLPSVVRLLVTAGASPMALDRHG-QTAAHLAC   81 (228)
T ss_dssp             TCCHHHHHHHTTCHHHHHHHHHHHHHTTCCSCCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTS-CCHHHHHH
T ss_pred             CccHHHHHHHcCCHHHHHHHHHHHHHCCCCCCccCCCCCccceehhccccccccccccccccccccccccc-cccccccc
Confidence            4555666666666555555542    455555555555555555555555555555555555554443332 35555555


Q ss_pred             HcCcHHHHHHHHHCC----CCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCC-CCCCCCCcHHHHHHhcCChHHHH
Q psy903          199 SSGFIEIVRLLINHG----ADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVE-DHNENGHTPLMEAASAGHVGVAK  273 (739)
Q Consensus       199 ~~~~~~~~~~Ll~~g----~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~-~~~~~~~t~L~~A~~~~~~~ii~  273 (739)
                      ..++.++++.+....    ...+.......++|+.+.........+.|.....+.. .....+.++|+.|+..+...+++
T Consensus        82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~  161 (228)
T d1k1aa_          82 EHRSPTCLRALLDSAAPGTLDLEARNYDGLTALHVAVNTECQETVQLLLERGADIDAVDIKSGRSPLIHAVENNSLSMVQ  161 (228)
T ss_dssp             HTTCHHHHHHHHHHSCTTSCCTTCCCTTSCCHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTTCCCHHHHHHHTTCHHHHH
T ss_pred             ccccccchhhhhhccccccccccccccccccccccccccccchhhhhhhccccccccccccchhhHHHHHHHhhhhhhhh
Confidence            555555555544322    1122333444555555555555555555555443322 23334555555555555555555


Q ss_pred             HHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHH
Q psy903          274 ILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVA  339 (739)
Q Consensus       274 ~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~  339 (739)
                      +++++|...... +..|.|||++|+..|+.+++++|+++|++++.++..|.|||++|++.++.+++
T Consensus       162 ~~~~~~~~~~~~-d~~g~t~L~~A~~~g~~~~v~~Ll~~Gad~n~~d~~G~TpL~~A~~~~~~div  226 (228)
T d1k1aa_         162 LLLQHGANVNAQ-MYSGSSALHSASGRGLLPLVRTLVRSGADSSLKNCHNDTPLMVARSRRVIDIL  226 (228)
T ss_dssp             HHHHTTCCTTCB-CTTSCBHHHHHHHHTCHHHHHHHHHTTCCTTCCCTTSCCTTTTCSSHHHHHHH
T ss_pred             hhhhhccccccc-cccCcchHHHHHHcCCHHHHHHHHHCCCCCCCCCCCCCCHHHHHHhCCCcccc
Confidence            555555554443 22355555555555555555555555555555555555555555555555544

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.2e-25  Score=192.80  Aligned_cols=153  Identities=29%  Similarity=0.397  Sum_probs=124.3

Q ss_pred             hHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHH
Q psy903          125 RSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIE  204 (739)
Q Consensus       125 ~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~  204 (739)
                      ++||.|+..|+.++|+.|+++|++++..|..|.||||+|+ .|+.+++++|++.|++++..+.. +.++++.++..+..+
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~-~~~~l~~~~~~~~~~   80 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGFGRTALQVMK-LGNPEIARRLLLRGANPDLKDRT-GFAVIHDAARAGFLD   80 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTTSCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHHTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCcccccccccc-ccccccccccccccccccccccc-Ccccccccccccccc
Confidence            6788888888888888888888888888888888888775 67888888888888887766544 458888888888888


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCC-CCCCCCCCCCcHHHHHHhcCChHHHHHHHHcC
Q psy903          205 IVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGA-NVEDHNENGHTPLMEAASAGHVGVAKILLEYG  279 (739)
Q Consensus       205 ~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~-~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~  279 (739)
                      +++.|++.+.+++..+..|.+||++|+..++.+++++|+++++ +.+.+|..|.||||+|+..++.+++++|+++|
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_          81 TLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            8888888888888888888888888888888888888887775 67777888888888888888888888888775

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.93  E-value=6.1e-29  Score=242.34  Aligned_cols=224  Identities=18%  Similarity=0.126  Sum_probs=165.6

Q ss_pred             CCchHHHHHHHcCCHHHHHH---HHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCC-CCCCcHHHHH
Q psy903          122 QNERSLVQACSDGDVKTVKK---LLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGI-KGECTPLMEA  197 (739)
Q Consensus       122 ~~~~~l~~A~~~~~~~~~~~---ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~-~~~~t~L~~A  197 (739)
                      .+.|+|+.|+..|+.+++++   |++.|++++..+..|.||||+|+..|+.++|++|++.|++++..+. ..|+||||+|
T Consensus        89 ~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~taL~~Aa~~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~A  168 (346)
T d2ajaa1          89 KSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENYQAFRLAAENGHLHVLNRLCELAPTEIMAMIQAENYHAFRLA  168 (346)
T ss_dssp             CHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHHHHHHHHHHTTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHH
T ss_pred             CCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCCCHHHHHHHCCCHHHHHHHHHcCCCccccccccCCCChhHHH
Confidence            35789999999999887765   7899999999999999999999999999999999999999877653 3467999999


Q ss_pred             HHcCcHHHHHHHHHCCCCCC---CCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCC-------CCCCcHHHHHHhcC
Q psy903          198 ASSGFIEIVRLLINHGADVN---GQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHN-------ENGHTPLMEAASAG  267 (739)
Q Consensus       198 ~~~~~~~~~~~Ll~~g~~~~---~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~-------~~~~t~L~~A~~~~  267 (739)
                      +..|+.+++++|++.|++..   ..+..+.||++.|+.+|+.+++++|+++|++++..+       ..+.+++..+...+
T Consensus       169 a~~g~~~iv~~Ll~~~~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~  248 (346)
T d2ajaa1         169 AENGHLHVLNRLCELAPTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNR  248 (346)
T ss_dssp             HHTTCHHHHHHHHHSCGGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHH
T ss_pred             HHHhhHHHHHHHHHcCCcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHhhcc
Confidence            99999999999999987653   334556788889999999999999999987664321       12223444443333


Q ss_pred             ChHHHHHHHHcCCCCc--ccC------cCccCCHHHHHHHcCCHHHHHHHHHcCCC-----CCCCCCcCCcHHHHHHhCC
Q psy903          268 HVGVAKILLEYGAGIN--THS------NEFKESALTLACYKGHLDMVRFLLSAGAD-----QEHKTDEMHTALMEASMDG  334 (739)
Q Consensus       268 ~~~ii~~Ll~~~~~~~--~~~------~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~-----~~~~~~~~~~~l~~a~~~~  334 (739)
                      ..+....+........  ...      .....++++.++..+..+++++|++.+..     ....+.++.||||+|++.|
T Consensus       249 ~~~~~~~l~~a~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~G  328 (346)
T d2ajaa1         249 LKEMHDAFKLSNPDGVFDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLG  328 (346)
T ss_dssp             HHHHHTTTTTTSSSSCCCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHT
T ss_pred             chHHHHHHHHhcccccHhHHhcccccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcC
Confidence            3333332222221111  000      01123678888889999999999987653     3344456889999999999


Q ss_pred             chHHHHHHHHc
Q psy903          335 HVEVAKLLLDS  345 (739)
Q Consensus       335 ~~~~~~~L~~~  345 (739)
                      +.+++++|++.
T Consensus       329 n~e~v~lLL~~  339 (346)
T d2ajaa1         329 NQGACALLLSI  339 (346)
T ss_dssp             CTTHHHHHTTS
T ss_pred             cHHHHHHHhCC
Confidence            99999999974

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.93  E-value=1.5e-25  Score=191.45  Aligned_cols=152  Identities=29%  Similarity=0.425  Sum_probs=140.7

Q ss_pred             chHHHHHHHcCCHHHHHHHHhc-CCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903          124 ERSLVQACSDGDVKTVKKLLTE-GRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF  202 (739)
Q Consensus       124 ~~~l~~A~~~~~~~~~~~ll~~-~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~  202 (739)
                      ...|+.||..|+.++|++|+++ +.+++..|..|.||||+|+ .|+.+++++|++++.+++..... +.+|++.++..++
T Consensus         3 g~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~-~~~~~~v~~Ll~~~~~~~~~~~~-~~~~l~~~~~~~~   80 (156)
T d1bd8a_           3 GDRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMM-FGSTAIALELLKQGASPNVQDTS-GTSPVHDAARTGF   80 (156)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSC-TTCHHHHHHHHHTTCCTTCCCTT-SCCHHHHHHHTTC
T ss_pred             cHHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCccccccc-ccccccccccccccccccccccc-ccccccccccccc
Confidence            4569999999999999999986 7899999999999999986 58899999999999998877654 5699999999999


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHc
Q psy903          203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEY  278 (739)
Q Consensus       203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~  278 (739)
                      .+++++++++|++++.+|..|.||||+|+..|+.+++++|+ .|++++.+|..|.||||+|+..|+.+++++|+++
T Consensus        81 ~~~~~~~l~~~~~~n~~~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          81 LDTLKVLVEHGADVNVPDGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHHHTTCCSCCCCTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccccccccccccCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            99999999999999999999999999999999999999887 6899999999999999999999999999999875

>d2ajaa1 a.118.24.1 (A:3-348) Hypothetical protein LPG2416 {Legionella pneumophila [TaxId: 446]}

class: All alpha proteins
fold: alpha-alpha superhelix
superfamily: Pseudo ankyrin repeat-like
family: Pseudo ankyrin repeat
domain: Hypothetical protein LPG2416
species: Legionella pneumophila [TaxId: 446]

Probab=99.93  E-value=1e-28  Score=240.71  Aligned_cols=229  Identities=13%  Similarity=0.082  Sum_probs=165.5

Q ss_pred             cccCCCCCcHHHHHHhcCcHHHHHH---HHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhhhhh
Q psy903           25 HETTDEGESLLSLACSAGYYELAQV---LLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTSSVS  101 (739)
Q Consensus        25 ~~~~~~g~t~L~~A~~~~~~~iv~~---Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  101 (739)
                      +.++..|+||||+|+.+|+.+++++   |++.|++++..+..|. ||||+|+.                           
T Consensus        84 ~~~~~~~~t~L~~Aa~~g~~~~~~~~~~L~~~~~~in~~~~~g~-taL~~Aa~---------------------------  135 (346)
T d2ajaa1          84 HKKGIKSEVICFVAAITGCSSALDTLCLLLTSDEIVKVIQAENY-QAFRLAAE---------------------------  135 (346)
T ss_dssp             HHHTCCHHHHHHHHHHHCCHHHHHHHTTC--CCSSCC--CHHHH-HHHHHHHH---------------------------
T ss_pred             HhccCCCCcHHHHHHHhCCHHHHHHHHHHHhCCCcccccCCCCC-CHHHHHHH---------------------------
Confidence            4467789999999999999887765   8999999998886654 66666665                           


Q ss_pred             chHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCcCC--CCCCcHHHHHHHcCcHHHHHHHHhCC
Q psy903          102 CALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHETT--DEGESLLSLACSAGYYELAQVLLAMH  179 (739)
Q Consensus       102 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~--~~g~t~L~~A~~~~~~~~v~~Ll~~~  179 (739)
                                                     .|+.+++++|++.|++++..+  .+|.||||+|+..|+.++|++|++.|
T Consensus       136 -------------------------------~G~~~~v~~Ll~~g~~~~~~~~~~~g~t~L~~Aa~~g~~~iv~~Ll~~~  184 (346)
T d2ajaa1         136 -------------------------------NGHLHVLNRLCELAPTEIMAMIQAENYHAFRLAAENGHLHVLNRLCELA  184 (346)
T ss_dssp             -------------------------------TTCHHHHHHHHHSCTTTHHHHHSHHHHHHHHHHHHTTCHHHHHHHHHSC
T ss_pred             -------------------------------CCCHHHHHHHHHcCCCccccccccCCCChhHHHHHHhhHHHHHHHHHcC
Confidence                                           458999999999999998865  46899999999999999999999999


Q ss_pred             CCcccc--CCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCC-------CCCCCcHHHHHHhcCcHHHHHHHHHCCCC--
Q psy903          180 ANVEDR--GIKGECTPLMEAASSGFIEIVRLLINHGADVNGQ-------SSSGNTPLMYACAGGHEAVVRVLLECGAN--  248 (739)
Q Consensus       180 ~~~~~~--~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~-------~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~--  248 (739)
                      ++....  ...++.||++.|+.+|+.+++++|++.|++++..       ...+.++++.+...+..+....+.....+  
T Consensus       185 ~~~~~~~~~~~~~~t~l~~A~~~g~~~iv~~Ll~~ga~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~a~~~~~  264 (346)
T d2ajaa1         185 PTEATAMIQAENYYAFRWAAVGRGHHNVINFLLDCPVMLAYAEIHEFEYGEKYVNPFIARHVNRLKEMHDAFKLSNPDGV  264 (346)
T ss_dssp             GGGHHHHHHHHHHHHHHHHHSTTCCHHHHHHHTTSHHHHHHHHHCTTTTTTTTHHHHHHHHHHHHHHHHTTTTTTSSSSC
T ss_pred             CcccccccccCCCcchhhHHhhcCHHHHHHHHHhCCCCcchHHHHHHHcCcHhhhHHHHHhhccchHHHHHHHHhccccc
Confidence            865432  2233457888899999999999999998776432       22233455555544444444333332221  


Q ss_pred             CCCCCC-------CCCcHHHHHHhcCChHHHHHHHHcCCCCcc----cCcCccCCHHHHHHHcCCHHHHHHHHHc
Q psy903          249 VEDHNE-------NGHTPLMEAASAGHVGVAKILLEYGAGINT----HSNEFKESALTLACYKGHLDMVRFLLSA  312 (739)
Q Consensus       249 ~~~~~~-------~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~----~~~~~~~~~l~~A~~~~~~~~v~~Ll~~  312 (739)
                      .+..+.       .+.++++.+...+..+++++|++.+.....    ..+..+.||||+|++.|+.++|++|++.
T Consensus       265 ~~~~~~~~~~~~~~~~~~l~~a~~~~~ld~v~~Ll~~~~~~~~~~~~~~~~~g~T~LhlA~~~Gn~e~v~lLL~~  339 (346)
T d2ajaa1         265 FDLVTKSECLQGFYMLRNLIRRNDEVLLDDIRFLLSIPGIKALAPTATIPGDANELLRLALRLGNQGACALLLSI  339 (346)
T ss_dssp             CCCSSHHHHHHHHHHHHHHHHHCCGGGHHHHHHHHTSTTTGGGSSCCSSTTCCCHHHHHHHHHTCTTHHHHHTTS
T ss_pred             HhHHhcccccccchhhhHHHHHhcCChHHHHHHHHhCcChhhhcccccCCCCCCcHHHHHHHcCcHHHHHHHhCC
Confidence            122211       123678888889999999999987764322    1233578999999999999999999853

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.93  E-value=8.1e-25  Score=186.94  Aligned_cols=150  Identities=32%  Similarity=0.435  Sum_probs=138.8

Q ss_pred             chHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcH
Q psy903          124 ERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFI  203 (739)
Q Consensus       124 ~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~  203 (739)
                      .|||+.|++.|+.++|++|+++|++++ .+..|.||||+|+..++.++++.++............. .++++.++...+.
T Consensus         3 ~t~L~~Aa~~g~~~~v~~LL~~ga~~~-~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~   80 (153)
T d1awcb_           3 GKKLLEAARAGQDDEVRILMANGAPFT-TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVD-RTPLHMAASEGHA   80 (153)
T ss_dssp             HHHHHHHHHHTCHHHHHHHHHHTCCCC-CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTC-CCHHHHHHHHTCH
T ss_pred             CHHHHHHHHCCCHHHHHHHHHcCCCcc-cccCCCcccccccccccccccccccccccccccccccc-ccccccccccccc
Confidence            489999999999999999999999887 68899999999999999999999999887776555444 5999999999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHH
Q psy903          204 EIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKIL  275 (739)
Q Consensus       204 ~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~L  275 (739)
                      ++++++..+|++++.++..|.||||+|+..|+.+++++|+++|++++.+|.+|.||||+|+.+|+.+++++|
T Consensus        81 ~~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          81 NIVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQSKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             eeeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCcccCCCCCCHHHHHHHcCCHHHHHhC
Confidence            999999999999999999999999999999999999999999999999999999999999999999999876

>d1ihba_ d.211.1.1 (A:) p18ink4C(ink6) {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: p18ink4C(ink6)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.92  E-value=1.3e-24  Score=186.41  Aligned_cols=154  Identities=28%  Similarity=0.313  Sum_probs=87.8

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHH
Q psy903          158 SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA  237 (739)
Q Consensus       158 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~  237 (739)
                      ++||+|+..|+.++|++|+++|++++..+.. |.||||+|+ .++.+++++|+++|++++.++..+.++++.++..+..+
T Consensus         3 ~~Lh~Aa~~g~~~~v~~Ll~~g~d~n~~d~~-g~TpL~~A~-~~~~ei~~~Ll~~~a~~~~~~~~~~~~l~~~~~~~~~~   80 (156)
T d1ihba_           3 NELASAAARGDLEQLTSLLQNNVNVNAQNGF-GRTALQVMK-LGNPEIARRLLLRGANPDLKDRTGFAVIHDAARAGFLD   80 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHTTSCCCTTCCCTT-SCCHHHHCC-SSCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHHTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHCCCCcCccCCc-ccccccccc-cccccccccccccccccccccccCcccccccccccccc
Confidence            4566666666666666666666655544432 346665553 45556666666666666555555666666666666666


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcC
Q psy903          238 VVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAG  313 (739)
Q Consensus       238 ~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~  313 (739)
                      +++.|++.+.+++..+..|.+|+++|+..++.+++++|+++++......+..|.||||+|+..++.+++++|+++|
T Consensus        81 ~~~~l~~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~Ll~~~~~~~~~~d~~g~TpL~~A~~~~~~~iv~~Ll~~G  156 (156)
T d1ihba_          81 TLQTLLEFQADVNIEDNEGNLPLHLAAKEGHLRVVEFLVKHTASNVGHRNHKGDTACDLARLYGRNEVVSLMQANG  156 (156)
T ss_dssp             HHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHSCCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTC
T ss_pred             cccccccccccccccccccccccccccccccccccccccccccccccccCCCCCCHHHHHHHcCCHHHHHHHHhcC
Confidence            6666666655555555556666666666666666666655554333333444555555555555555555555544

>d1bd8a_ d.211.1.1 (A:) Cell cycle inhibitor p19ink4D {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p19ink4D
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.91  E-value=6.4e-24  Score=181.21  Aligned_cols=151  Identities=27%  Similarity=0.357  Sum_probs=106.5

Q ss_pred             cHHHHHHHcCcHHHHHHHHHC-CCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChH
Q psy903          192 TPLMEAASSGFIEIVRLLINH-GADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVG  270 (739)
Q Consensus       192 t~L~~A~~~~~~~~~~~Ll~~-g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~  270 (739)
                      .+|+.|+..|+.++|++|++. +++++.+|..|+||||+|+. ++.+++++|++++.+++..+..|.+|++.++..++.+
T Consensus         4 ~~L~~Aa~~g~~~~vk~lL~~~~~~~n~~d~~g~t~L~~A~~-~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~~~~~~~~~   82 (156)
T d1bd8a_           4 DRLSGAAARGDVQEVRRLLHRELVHPDALNRFGKTALQVMMF-GSTAIALELLKQGASPNVQDTSGTSPVHDAARTGFLD   82 (156)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHTTCCCTTCCCTTSCCHHHHSCT-TCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHhCCCCCCccCCCCCcccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            457777777777777777654 66777777777777776653 6667777777777777777777777777777777777


Q ss_pred             HHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHHHHcCCCCCCCCCcCCcHHHHHHhCCchHHHHHHHHc
Q psy903          271 VAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFLLSAGADQEHKTDEMHTALMEASMDGHVEVAKLLLDS  345 (739)
Q Consensus       271 ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~~l~~a~~~~~~~~~~~L~~~  345 (739)
                      ++++++++|++++.. +..+.||||+|+..|+.+++++|+ .|++++.++..|.|||++|+..|+.+++++|+++
T Consensus        83 ~~~~~l~~~~~~n~~-~~~~~t~L~~A~~~~~~~i~~~L~-~~~~~~~~d~~G~TpL~~A~~~g~~~iv~~Ll~h  155 (156)
T d1bd8a_          83 TLKVLVEHGADVNVP-DGTGALPIHLAVQEGHTAVVSFLA-AESDLHRRDARGLTPLELALQRGAQDLVDILQGH  155 (156)
T ss_dssp             HHHHHHHTTCCSCCC-CTTSCCHHHHHHHHTCHHHHHHHH-TTSCTTCCCTTSCCHHHHHHHSCCHHHHHHHHTT
T ss_pred             ccccccccccccccc-cCCCCeeecccccccccccccccc-ccccccccCCCCCCHHHHHHHcCCHHHHHHHHhh
Confidence            777777777766653 344677777777777777777665 5667777777777777777777777777777654

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.90  E-value=3.8e-24  Score=173.46  Aligned_cols=121  Identities=25%  Similarity=0.337  Sum_probs=80.8

Q ss_pred             CchHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCc
Q psy903          123 NERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGF  202 (739)
Q Consensus       123 ~~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~  202 (739)
                      ..++||.|+..|+.+++++|+++|++++..+..|.||||+|+ .|+.+++++|+++|++++..+..++.||||+|+..|+
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g~   81 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSYGRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREGF   81 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSSSCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHTC
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCccccccccccccccccc-ccccccccccccccccccccccccccccccccccccc
Confidence            345667777777777777777777777766666777666553 5666777777776666666655555456666666666


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHH
Q psy903          203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLE  244 (739)
Q Consensus       203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~  244 (739)
                      .+++++|+++|++++.+|..|.||||+|+.+|+.+++++|++
T Consensus        82 ~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          82 LDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             HHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             ccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            666666666666666666666666666666666666666653

>d1awcb_ d.211.1.1 (B:) GA bindinig protein (GABP) beta 1 {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: GA bindinig protein (GABP) beta 1
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.90  E-value=7.6e-23  Score=174.50  Aligned_cols=149  Identities=28%  Similarity=0.398  Sum_probs=92.1

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHH
Q psy903          158 SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA  237 (739)
Q Consensus       158 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~  237 (739)
                      |||+.|++.|+.++|++|+++|++++  .+..|+||||+|+..++.++++.++.........+..+.++++.++...+.+
T Consensus         4 t~L~~Aa~~g~~~~v~~LL~~ga~~~--~~~~g~t~L~~a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~   81 (153)
T d1awcb_           4 KKLLEAARAGQDDEVRILMANGAPFT--TDWLGTSPLHLAAQYGHFSTTEVLLRAGVSRDARTKVDRTPLHMAASEGHAN   81 (153)
T ss_dssp             HHHHHHHHHTCHHHHHHHHHHTCCCC--CCTTCCCHHHHHHHHTCHHHHHHHHTTTCCTTCCCTTCCCHHHHHHHHTCHH
T ss_pred             HHHHHHHHCCCHHHHHHHHHcCCCcc--cccCCCccccccccccccccccccccccccccccccccccccccccccccce
Confidence            56666666666666666666666544  2334456666666666666666666655555555555566666666666666


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCCCCcccCcCccCCHHHHHHHcCCHHHHHHH
Q psy903          238 VVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGAGINTHSNEFKESALTLACYKGHLDMVRFL  309 (739)
Q Consensus       238 ~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~~~~~~~~~~~~~~l~~A~~~~~~~~v~~L  309 (739)
                      ++++++.+|++.+.++.+|.||||+|+..|+.+++++|+++|++++.. +..|.|||++|+.+|+.+++++|
T Consensus        82 ~~~~l~~~~~~~~~~~~~g~T~L~~A~~~g~~~iv~~ll~~gad~~~~-d~~g~Tpl~~A~~~g~~eiv~lL  152 (153)
T d1awcb_          82 IVEVLLKHGADVNAKDMLKMTALHWATEHNHQEVVELLIKYGADVHTQ-SKFCKTAFDISIDNGNEDLAEIL  152 (153)
T ss_dssp             HHHHHHTTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHTTCCTTCC-CTTSCCHHHHHHHTTCHHHHHHH
T ss_pred             eeecccccCCccccccccCchHHHhhhhcchhheeeeccccccCCccc-CCCCCCHHHHHHHcCCHHHHHhC
Confidence            666666666666666666666666666666666666666666665543 34466666666666666666554

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.89  E-value=6.5e-24  Score=203.06  Aligned_cols=187  Identities=19%  Similarity=0.167  Sum_probs=130.0

Q ss_pred             cCCCCccc-CCCCCcHHHHHHhcCcHHHHHHHHHccccccccCCCCCcchhHHHhhccccccccCCCCCCCHHHHHhhhh
Q psy903           20 EGRSVHET-TDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFGKLATGDGKLADPEVLRRLTS   98 (739)
Q Consensus        20 ~g~~~~~~-~~~g~t~L~~A~~~~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~a~~~~~~~~~~~~~~~~~~~~~~~~~~   98 (739)
                      .++++|.. |..|+||||+|+..|+.++|++|+++||+++..|..|. ||||.|+..+.                     
T Consensus        95 ~~~dvn~~~D~~G~T~LH~Aa~~g~~~~v~~Ll~~gad~~~~d~~G~-TpL~~A~~~~~---------------------  152 (301)
T d1sw6a_          95 TQLNLNIPVDEHGNTPLHWLTSIANLELVKHLVKHGSNRLYGDNMGE-SCLVKAVKSVN---------------------  152 (301)
T ss_dssp             SCCCSCSCCSTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTBCCTTCC-CHHHHHHHSSH---------------------
T ss_pred             cCCCcCcCcCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCcCCcccc-cHHHHhhhccc---------------------
Confidence            57788876 89999999999999999999999999999999988876 99999998661                     


Q ss_pred             hhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCH-HHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCc----H----
Q psy903           99 SVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDV-KTVKKLLTEGRSVHETTDEGESLLSLACSAGY----Y----  169 (739)
Q Consensus        99 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~-~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~----~----  169 (739)
                                                     ....+.+ ++++++.+   .+...|..|+||||+++..+.    .    
T Consensus       153 -------------------------------~~~~~~~~~ll~~l~~---~~~~~d~~g~t~lh~~~~~~~~~~~~~~~~  198 (301)
T d1sw6a_         153 -------------------------------NYDSGTFEALLDYLYP---CLILEDSMNRTILHHIIITSGMTGCSAAAK  198 (301)
T ss_dssp             -------------------------------HHHTTCHHHHHHHHGG---GGGEECTTCCCHHHHHHHHHTSTTCHHHHH
T ss_pred             -------------------------------chhhhhHHHHHHHHhh---hhhhcccccCCHHHHHHHHhCccccHHHHH
Confidence                                           0011222 33444433   345567788899998876443    2    


Q ss_pred             ----HHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHH-----HHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHH
Q psy903          170 ----ELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIV-----RLLINHGADVNGQSSSGNTPLMYACAGGHEAVVR  240 (739)
Q Consensus       170 ----~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~-----~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~  240 (739)
                          .++.++.+.+..........+.++++.+........+     .+++..  .+|.+|..|+||||+|++.|+.++|+
T Consensus       199 ~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~in~~D~~G~TpLh~A~~~g~~~iv~  276 (301)
T d1sw6a_         199 YYLDILMGWIVKKQNRPIQSGTNEKESKPNDKNGERKDSILENLDLKWIIAN--MLNAQDSNGDTCLNIAARLGNISIVD  276 (301)
T ss_dssp             HHHHHHHHHHHHGGGCCEEEC----------------CHHHHHCSHHHHHHH--TTTCCCTTSCCHHHHHHHHCCHHHHH
T ss_pred             HHHHHHHHHHHhcCCcchhcccccccchhHHHHhcchHHHHHHHhhHHHHhc--CccCCCCCCCCHHHHHHHcCCHHHHH
Confidence                2445666666655555545555666666555443333     223333  36779999999999999999999999


Q ss_pred             HHHHCCCCCCCCCCCCCcHHHHHH
Q psy903          241 VLLECGANVEDHNENGHTPLMEAA  264 (739)
Q Consensus       241 ~Ll~~~~~~~~~~~~~~t~L~~A~  264 (739)
                      +|+++|++++.+|..|.|||++|+
T Consensus       277 ~Ll~~GAd~~~~n~~G~Tpl~~A~  300 (301)
T d1sw6a_         277 ALLDYGADPFIANKSGLRPVDFGA  300 (301)
T ss_dssp             HHHHTTCCTTCCCTTSCCGGGGTC
T ss_pred             HHHHCCCCCCCCCCCCCCHHHHcC
Confidence            999999999999999999999884

>d1bi7b_ d.211.1.1 (B:) Cell cycle inhibitor p16ink4A {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Cell cycle inhibitor p16ink4A
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.89  E-value=2.3e-23  Score=168.76  Aligned_cols=120  Identities=26%  Similarity=0.305  Sum_probs=86.6

Q ss_pred             CCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCC-cHHHHHHhcC
Q psy903          156 GESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGN-TPLMYACAGG  234 (739)
Q Consensus       156 g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~-t~L~~A~~~~  234 (739)
                      +.++||+|+..|+.++|++|+++|++++..+.. |.||+|.|+ .|+.+++++|+++|++++.++..+. ||||+|+..|
T Consensus         3 ~~~~L~~Aa~~G~~~~v~~Ll~~gad~n~~~~~-g~t~l~~a~-~g~~~~v~~Ll~~ga~~~~~~~~~~~~~L~~A~~~g   80 (125)
T d1bi7b_           3 SADWLATAAARGRVEEVRALLEAGANPNAPNSY-GRRPIQVMM-MGSARVAELLLLHGAEPNCADPATLTRPVHDAAREG   80 (125)
T ss_dssp             STTHHHHHHHHTCHHHHHHHHTTTCCTTCCCSS-SCCTTTSSC-TTCHHHHHHHHTTTCCCCCCCTTTCCCHHHHHHHHT
T ss_pred             ChhHHHHHHHCCCHHHHHHHHHcCCcccccccc-ccccccccc-cccccccccccccccccccccccccccccccccccc
Confidence            446777777777777777777777777665543 457777554 5777777777777777777776655 4777777777


Q ss_pred             cHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHH
Q psy903          235 HEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLE  277 (739)
Q Consensus       235 ~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~  277 (739)
                      +.+++++|+++|++++.+|..|.||||+|++.|+.+++++|++
T Consensus        81 ~~~~v~~Ll~~ga~~~~~d~~G~T~l~~A~~~g~~~~v~~Lls  123 (125)
T d1bi7b_          81 FLDTLVVLHRAGARLDVRDAWGRLPVDLAEELGHRDVARYLRA  123 (125)
T ss_dssp             CHHHHHHHHHHTCCSSCCCTTCCCHHHHHHHHTCHHHHHHHSS
T ss_pred             cccccccccccccccccccCCCCCHHHHHHHcCCHHHHHHHHh
Confidence            7777777777777777777777777777777777777777753

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.87  E-value=2.1e-22  Score=164.16  Aligned_cols=118  Identities=26%  Similarity=0.323  Sum_probs=58.2

Q ss_pred             HHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHH
Q psy903          159 LLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAV  238 (739)
Q Consensus       159 ~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~  238 (739)
                      +|+.|+..|+.++|++|+++|++++..+.. |+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+.+|+.++
T Consensus         4 lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~-g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           4 LLLDSSLEGEFDLVQRIIYEVDDPSLPNDE-GITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHTCHHHHHHHTSTTSSCCCCCTT-SCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHcCCHHHHHHHHHcCCCccccccc-cccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence            455555555555555555555554444332 3455555555555555555555555555555555555555555555555


Q ss_pred             HHHHHHCCCCCCCCCC-CCCcHHHHH--HhcCChHHHHHHHH
Q psy903          239 VRVLLECGANVEDHNE-NGHTPLMEA--ASAGHVGVAKILLE  277 (739)
Q Consensus       239 v~~Ll~~~~~~~~~~~-~~~t~L~~A--~~~~~~~ii~~Ll~  277 (739)
                      +++|+++|++++..+. .+.||++.+  ...|+.+++++|+.
T Consensus        83 v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~  124 (130)
T d1ycsb1          83 CKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG  124 (130)
T ss_dssp             HHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred             HHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHh
Confidence            5555555555544332 244443332  23344555555543

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=2.1e-23  Score=166.88  Aligned_cols=105  Identities=30%  Similarity=0.370  Sum_probs=53.8

Q ss_pred             cHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHH
Q psy903          158 SLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEA  237 (739)
Q Consensus       158 t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~  237 (739)
                      |||++|+..|+.++|++|+++|++++..+. .|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|+.+|+.+
T Consensus         4 tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~-~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~g~tpLh~A~~~~~~~   82 (118)
T d1myoa_           4 KEFMWALKNGDLDEVKDYVAKGEDVNRTLE-GGRKPLHYAADCGQLEILEFLLLKGADINAPDKHHITPLLSAVYEGHVS   82 (118)
T ss_dssp             HHHHHHHHTTCHHHHHHHHTTTCCCCCCSS-SSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSSCSCHHHHHHTTTCCH
T ss_pred             hHHHHHHHCCCHHHHHHHHHhhhccccccc-cccccccccccccccccccccccccceeeecccccccchhhhhhcCchh
Confidence            344455555555555555554444444332 2335555555555555555555555555555555555555555555555


Q ss_pred             HHHHHHHCCCCCCCCCCCCCcHHHHH
Q psy903          238 VVRVLLECGANVEDHNENGHTPLMEA  263 (739)
Q Consensus       238 ~v~~Ll~~~~~~~~~~~~~~t~L~~A  263 (739)
                      ++++|+++|++++.+|.+|.||||+|
T Consensus        83 ~v~~Ll~~Gad~~~~d~~G~t~l~~a  108 (118)
T d1myoa_          83 CVKLLLSKGADKTVKGPDGLTALEAT  108 (118)
T ss_dssp             HHHHHHTTCCCSSSSSSSTCCCCCTC
T ss_pred             hhhhhhcccccceeeCCCCCCHHHHH
Confidence            55555555555555555555555544

>d1myoa_ d.211.1.1 (A:) Myotrophin {Rat (Rattus norvegicus) [TaxId: 10116]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Myotrophin
species: Rat (Rattus norvegicus) [TaxId: 10116]

Probab=99.87  E-value=2.9e-23  Score=166.02  Aligned_cols=107  Identities=28%  Similarity=0.449  Sum_probs=102.1

Q ss_pred             chHHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHcCcH
Q psy903          124 ERSLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASSGFI  203 (739)
Q Consensus       124 ~~~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~~~~  203 (739)
                      .|||++|++.|+.+++++|+++|++++..+..|.||||+|+..|+.+++++|++.|++++..+.. |+||||+|+..|+.
T Consensus         3 ~tpL~~A~~~g~~~~v~~Ll~~g~d~n~~~~~g~t~lh~A~~~~~~~~~~~ll~~g~din~~d~~-g~tpLh~A~~~~~~   81 (118)
T d1myoa_           3 DKEFMWALKNGDLDEVKDYVAKGEDVNRTLEGGRKPLHYAADCGQLEILEFLLLKGADINAPDKH-HITPLLSAVYEGHV   81 (118)
T ss_dssp             HHHHHHHHHTTCHHHHHHHHTTTCCCCCCSSSSCCTTHHHHHHSTTTHHHHHHHSSCTTTCCSSS-CSCHHHHHHTTTCC
T ss_pred             ChHHHHHHHCCCHHHHHHHHHhhhccccccccccccccccccccccccccccccccceeeecccc-cccchhhhhhcCch
Confidence            57999999999999999999999999999999999999999999999999999999999887655 57999999999999


Q ss_pred             HHHHHHHHCCCCCCCCCCCCCcHHHHHH
Q psy903          204 EIVRLLINHGADVNGQSSSGNTPLMYAC  231 (739)
Q Consensus       204 ~~~~~Ll~~g~~~~~~~~~~~t~L~~A~  231 (739)
                      +++++|+++|++++.+|..|.||||+|.
T Consensus        82 ~~v~~Ll~~Gad~~~~d~~G~t~l~~a~  109 (118)
T d1myoa_          82 SCVKLLLSKGADKTVKGPDGLTALEATD  109 (118)
T ss_dssp             HHHHHHHTTCCCSSSSSSSTCCCCCTCS
T ss_pred             hhhhhhhcccccceeeCCCCCCHHHHHh
Confidence            9999999999999999999999999883

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.86  E-value=1.2e-21  Score=163.49  Aligned_cols=123  Identities=20%  Similarity=0.260  Sum_probs=105.9

Q ss_pred             ChhhhhhcCCHHHHHHHHHcCCCCccc------CCCCCcHHHHHHhc---CcHHHHHHHHHccccccccCCCCCcchhHH
Q psy903            1 SLVQACSDGDVKTVKKLLTEGRSVHET------TDEGESLLSLACSA---GYYELAQVLLAMHANVEDRGIKGECTPLME   71 (739)
Q Consensus         1 ~L~~A~~~g~~~~v~~ll~~g~~~~~~------~~~g~t~L~~A~~~---~~~~iv~~Ll~~ga~~~~~~~~~~~t~l~~   71 (739)
                      +|+.|++++|+..|..++..|.+++..      +..|+||||+|+..   |+.++|++|+++|++++.++..|. ||||+
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~~~~~~~~g~t~Lh~A~~~~~~~~~~iv~~Ll~~gadin~~d~~g~-TpLh~   87 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYADGVDLTEKIPLANGHEPDETALHLAVRSVDRTSLHIVDFLVQNSGNLDKQTGKGS-TALHY   87 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTSBCCCSSCSSTTCBHHHHHHHHCCTTTHHHHHHHHHHCSCTTCCCTTCC-CHHHH
T ss_pred             HHHHHHHhCCHHHHHHHHHcCCCcCCCCCcccCCCCCCchHHHHHHhcCCCCHHHHHHHHHcCCChhhhhhhhc-ccccc
Confidence            378999999999999999999887665      67799999999974   678999999999999988887765 77777


Q ss_pred             HhhccccccccCCCCCCCHHHHHhhhhhhhchHHHHHHHHHhhhcCCCCCCCchHHHHHHHcCCHHHHHHHHhcCCCCCc
Q psy903           72 AASSGFGKLATGDGKLADPEVLRRLTSSVSCALDEAAAALTRMRNENPRPQNERSLVQACSDGDVKTVKKLLTEGRSVHE  151 (739)
Q Consensus        72 a~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~A~~~~~~~~~~~ll~~~~~~~~  151 (739)
                      |+..|                                                          +.+++++|++.|++++.
T Consensus        88 A~~~~----------------------------------------------------------~~~~v~~Ll~~gad~~~  109 (154)
T d1dcqa1          88 CCLTD----------------------------------------------------------NAECLKLLLRGKASIEI  109 (154)
T ss_dssp             HHHTT----------------------------------------------------------CHHHHHHHHHTTCCTTC
T ss_pred             ccccc----------------------------------------------------------cccccccccccCccccc
Confidence            66554                                                          78899999999999999


Q ss_pred             CCCCCCcHHHHHHHcCcHHHHHHHHhCCCCc
Q psy903          152 TTDEGESLLSLACSAGYYELAQVLLAMHANV  182 (739)
Q Consensus       152 ~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~  182 (739)
                      .|..|.||||+|+..|+.+++++|++.+...
T Consensus       110 ~d~~g~tpL~~A~~~~~~~i~~~L~~~~~~~  140 (154)
T d1dcqa1         110 ANESGETPLDIAKRLKHEHCEELLTQALSGR  140 (154)
T ss_dssp             CCTTSCCHHHHHHHTTCHHHHHHHHHHHTTC
T ss_pred             cCCCCCCHHHHHHHcCCHHHHHHHHHhCCCC
Confidence            9999999999999999999999999876543

>d1ycsb1 d.211.1.1 (B:327-456) 53BP2 {Human (Homo sapiens) [TaxId: 9606]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: 53BP2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.86  E-value=1.2e-21  Score=159.54  Aligned_cols=120  Identities=28%  Similarity=0.397  Sum_probs=67.4

Q ss_pred             cHHHHHHHcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHH
Q psy903          192 TPLMEAASSGFIEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGV  271 (739)
Q Consensus       192 t~L~~A~~~~~~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~i  271 (739)
                      ++|+.|+..|+.+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|.+|+||||+|+..|+.++
T Consensus         3 ~lL~~A~~~G~~~~v~~Ll~~g~d~n~~d~~g~t~Lh~A~~~~~~~~~~~ll~~g~~~~~~d~~g~tpLh~A~~~g~~~~   82 (130)
T d1ycsb1           3 ALLLDSSLEGEFDLVQRIIYEVDDPSLPNDEGITALHNAVCAGHTEIVKFLVQFGVNVNAADSDGWTPLHCAASCNNVQV   82 (130)
T ss_dssp             HHHHHHHHHTCHHHHHHHTSTTSSCCCCCTTSCCHHHHHHHHTCHHHHHHHHHHTCCTTCCCTTCCCHHHHHHHTTCHHH
T ss_pred             HHHHHHHHcCCHHHHHHHHHcCCCccccccccccccccccccccccccccccccccccccccccCcccccccchhhHHHH
Confidence            44555555555555555555555555555555555555555555555555555555555555555555555555555555


Q ss_pred             HHHHHHcCCCCcccCcCccCCHHHHH--HHcCCHHHHHHHHH
Q psy903          272 AKILLEYGAGINTHSNEFKESALTLA--CYKGHLDMVRFLLS  311 (739)
Q Consensus       272 i~~Ll~~~~~~~~~~~~~~~~~l~~A--~~~~~~~~v~~Ll~  311 (739)
                      +++|+++|++++......+.+++..+  +..|+.+++++|++
T Consensus        83 v~~Ll~~ga~v~~~~~~~~~~~~~~~~a~~~g~~eiv~~L~~  124 (130)
T d1ycsb1          83 CKFLVESGAAVFAMTYSDMQTAADKCEEMEEGYTQCSQFLYG  124 (130)
T ss_dssp             HHHHHHTTCCTTCCCSSSCCCHHHHCCSSSTTCCCHHHHHHH
T ss_pred             HHHHHHcCCCcccccCCCCCCHHHHHHHHHcChHHHHHHHHh
Confidence            55555555555544433444554433  34455555555554

>d1dcqa1 d.211.1.1 (A:369-522) Pyk2-associated protein beta {Mouse (Mus musculus) [TaxId: 10090]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Pyk2-associated protein beta
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.84  E-value=2.3e-20  Score=155.61  Aligned_cols=127  Identities=26%  Similarity=0.366  Sum_probs=78.2

Q ss_pred             HHHHHHHcCCHHHHHHHHhcCCCCCcCCCCCCcHHHHHHHcCcHHHHHHHHhCCCCccccCCCCCCcHHHHHHHc---Cc
Q psy903          126 SLVQACSDGDVKTVKKLLTEGRSVHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAASS---GF  202 (739)
Q Consensus       126 ~l~~A~~~~~~~~~~~ll~~~~~~~~~~~~g~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~L~~A~~~---~~  202 (739)
                      .|..|++.+++..+..++..|.+++....                            .......|.||||+|+..   ++
T Consensus         9 ~L~~Av~~~dl~~l~~~~~~g~d~~~~~~----------------------------~~~~~~~g~t~Lh~A~~~~~~~~   60 (154)
T d1dcqa1           9 SLCEAVKTRDIFGLLQAYADGVDLTEKIP----------------------------LANGHEPDETALHLAVRSVDRTS   60 (154)
T ss_dssp             HHHHHHHTTCHHHHHHHHHTTCCTTSBCC----------------------------CSSCSSTTCBHHHHHHHHCCTTT
T ss_pred             HHHHHHHhCCHHHHHHHHHcCCCcCCCCC----------------------------cccCCCCCCchHHHHHHhcCCCC
Confidence            46677788888888888877776654310                            001112234555555543   44


Q ss_pred             HHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCcHHHHHHHHHCCCCCCCCCCCCCcHHHHHHhcCChHHHHHHHHcCC
Q psy903          203 IEIVRLLINHGADVNGQSSSGNTPLMYACAGGHEAVVRVLLECGANVEDHNENGHTPLMEAASAGHVGVAKILLEYGA  280 (739)
Q Consensus       203 ~~~~~~Ll~~g~~~~~~~~~~~t~L~~A~~~~~~~~v~~Ll~~~~~~~~~~~~~~t~L~~A~~~~~~~ii~~Ll~~~~  280 (739)
                      .+++++|+++|++++.+|..|+||||+|+..|+.+++++|+++|++++.+|..|.||||+|++.|+.+++++|++.+.
T Consensus        61 ~~iv~~Ll~~gadin~~d~~g~TpLh~A~~~~~~~~v~~Ll~~gad~~~~d~~g~tpL~~A~~~~~~~i~~~L~~~~~  138 (154)
T d1dcqa1          61 LHIVDFLVQNSGNLDKQTGKGSTALHYCCLTDNAECLKLLLRGKASIEIANESGETPLDIAKRLKHEHCEELLTQALS  138 (154)
T ss_dssp             HHHHHHHHHHCSCTTCCCTTCCCHHHHHHHTTCHHHHHHHHHTTCCTTCCCTTSCCHHHHHHHTTCHHHHHHHHHHHT
T ss_pred             HHHHHHHHHcCCChhhhhhhhccccccccccccccccccccccCccccccCCCCCCHHHHHHHcCCHHHHHHHHHhCC
Confidence            566666666666666666666666666666666666666666666666666666666666666666666666666443

>d1sw6a_ d.211.1.1 (A:) Swi6 ankyrin-repeat fragment {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Alpha and beta proteins (a+b)
fold: beta-hairpin-alpha-hairpin repeat
superfamily: Ankyrin repeat
family: Ankyrin repeat
domain: Swi6 ankyrin-repeat fragment
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.83  E-value=6.9e-21  Score=181.82  Aligned_cols=49  Identities=20%  Similarity=0.279  Sum_probs=44.2

Q ss_pred             CccCCCCCCCHHHHHHHcCcHHHHHHHHHcCCCcccccCCCCCcHHHHHH
Q psy903          400 VHETTDEGESLLSLACSAGYYELAQVLLAMHANVEDRGIKGECTPLMEAA  449 (739)
Q Consensus       400 ~~~~~~~~~t~l~~a~~~~~~~~v~~Ll~~~~~~~~~~~~~~~t~l~~a~  449 (739)
                      +|.+|..|.||||+|++.|+.+++++|++.|++++..+..| .|||++|+
T Consensus       252 in~~D~~G~TpLh~A~~~g~~~iv~~Ll~~GAd~~~~n~~G-~Tpl~~A~  300 (301)
T d1sw6a_         252 LNAQDSNGDTCLNIAARLGNISIVDALLDYGADPFIANKSG-LRPVDFGA  300 (301)
T ss_dssp             TTCCCTTSCCHHHHHHHHCCHHHHHHHHHTTCCTTCCCTTS-CCGGGGTC
T ss_pred             ccCCCCCCCCHHHHHHHcCCHHHHHHHHHCCCCCCCCCCCC-CCHHHHcC
Confidence            56688999999999999999999999999999999888766 99999875