Psyllid ID: psy9067

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Local Sequence Feature Prediction

Residue Number Marker
--------10--------20--------30--------40--------50--------60--------70--------80--------90-------100-------110-------120-------130-------140-------150-------160-------170-------180-------19
Protein Sequence
MVNTIYYWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTPL
Secondary Structure (PSIPRED)
cccccccccccccccccccccccHHHHHccccccccccccccccccccccHHHHHccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccccHHcccccccccccccccccccccccccccccccccccccccccccccccccccHHHHccccccc
Secondary Structure Prediction (SSPRO)
ccccccccccccccEEEccccHHHHHcHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHEEcccccccccccccEEHHccccEEccccccEcccccHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHccccEEccccccEEccHHHHHHHHHHHHcc
Coil and Loop (DISEMBL)
MVNTIYYWSDTTGYLRYHVMYLLARHLkshseerphkcsvcERGFKTIASLQNHInthtgvkphkckycesrfttsgeLVRHVRykhthekpelvrhvrykhthekphkcsicDYASVELSKMRNhmrshtgerpyqcahctyaspdtfkLKRHLrihtgekpyacdicharftqsnslkshrlihtpl
Flexible Loop (DISEMBL)
mvntiyywsdttgYLRYHVMYLLARHLKshseerphKCSVCERGFKTIASLQNHinthtgvkphkckyCESRFTtsgelvrhvrykhthekpelvrhvrykhthekphkcsicDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARftqsnslkshrlihtpl
Low Complexity Region (SEG)
MVNTIYYWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTPL
Disordered region (IsUnstruct)
**NTIYYWSDTTGYLRYHVMYLLARHLKS******HKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELS***********ERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFT***************
Disordered Region (DISOPRED)
MVNTIYYWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT**
Disordered Region (DISEMBL)
MVNTIYYWSDTTGYLRYHVMYLLARHL***********SVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTPL
Disordered Region (DISPRO)
**NTIYYWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP*
Transmembrane Helix (TMHMM)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (HMMTOP)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Transmembrane Helix (MEMSAT)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (MEMSAT_SVM)
iiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiiihhhhhhhhhhhhhhhhooooooooooooooooooooooooooooooo
TM Helix, Signal Peptide (Phobius)
ooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooooo
Signal Peptide (SignalP HMM Mode)
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Signal Peptide (SignalP NN Mode)
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Coiled Coils (COILS)
MVNTIYYWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTPL
Positional Conservation
no confident homologs detected

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Close Homologs for Annotation Transfer

Close Homologs in SWISS-PROT Database Detected by BLAST

Original result of BLAST against SWISS-PROT Database

ID	Length	Definition	RBH(Q2H)	RBH(H2Q)	Q cover	H cover	Identity	E-value
Query	189	2.2.26 [Sep-21-2011]
Q61164	736	Transcriptional repressor	yes	N/A	0.777	0.199	0.623	3e-55
Q08705	728	Transcriptional repressor	yes	N/A	0.777	0.201	0.623	3e-55
Q9R1D1	737	Transcriptional repressor	yes	N/A	0.777	0.199	0.623	4e-55
P49711	727	Transcriptional repressor	yes	N/A	0.777	0.202	0.623	4e-55
Q8NI51	663	Transcriptional repressor	no	N/A	0.793	0.226	0.569	3e-50
A2APF3	636	Transcriptional repressor	no	N/A	0.756	0.224	0.588	8e-50
Q9NPA5	681	Zinc finger protein 64 ho	no	N/A	0.777	0.215	0.417	5e-31
Q9NW07	568	Zinc finger protein 358 O	no	N/A	0.788	0.262	0.4	6e-31
Q4R6C2	475	Zinc finger protein 383 O	N/A	N/A	0.862	0.343	0.418	3e-30
P17027	643	Zinc finger protein 23 OS	no	N/A	0.894	0.262	0.4	4e-30

>sp|Q61164|CTCF_MOUSE Transcriptional repressor CTCF OS=Mus musculus GN=Ctcf PE=1 SV=2

 Score =  214 bits (544), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 101/162 (62%), Positives = 124/162 (76%), Gaps = 15/162 (9%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
           L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct: 281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query: 83  VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
            RYK               HTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct: 341 RRYK---------------HTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query: 143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRL 184
           YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L
Sbjct: 386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHIL 427

Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping (By similarity). Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X-inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.
Mus musculus (taxid: 10090)

>sp|Q08705|CTCF_CHICK Transcriptional repressor CTCF OS=Gallus gallus GN=CTCF PE=1 SV=1

 Score =  214 bits (544), Expect = 3e-55,   Method: Compositional matrix adjust.
 Identities = 101/162 (62%), Positives = 124/162 (76%), Gaps = 15/162 (9%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
           L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct: 281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query: 83  VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
            RYK               HTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct: 341 RRYK---------------HTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query: 143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRL 184
           YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L
Sbjct: 386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHIL 427

Acts as both a transcriptional activator and repressor of the MYC gene.

Gallus gallus (taxid: 9031)

>sp|Q9R1D1|CTCF_RAT Transcriptional repressor CTCF OS=Rattus norvegicus GN=Ctcf PE=2 SV=1

 Score =  213 bits (543), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 101/162 (62%), Positives = 124/162 (76%), Gaps = 15/162 (9%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
           L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct: 281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query: 83  VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
            RYK               HTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct: 341 RRYK---------------HTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query: 143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRL 184
           YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L
Sbjct: 386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHIL 427

Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping. Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X-inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.

Rattus norvegicus (taxid: 10116)

>sp|P49711|CTCF_HUMAN Transcriptional repressor CTCF OS=Homo sapiens GN=CTCF PE=1 SV=1

 Score =  213 bits (543), Expect = 4e-55,   Method: Compositional matrix adjust.
 Identities = 101/162 (62%), Positives = 124/162 (76%), Gaps = 15/162 (9%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
           L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct: 281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query: 83  VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
            RYK               HTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct: 341 RRYK---------------HTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query: 143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRL 184
           YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L
Sbjct: 386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHIL 427

Chromatin binding factor that binds to DNA sequence specific sites. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Acts as transcriptional repressor binding to promoters of vertebrate MYC gene and BAG1 gene. Also binds to the PLK and PIM1 promoters. Acts as a transcriptional activator of APP. Regulates APOA1/C3/A4/A5 gene cluster and controls MHC class II gene expression. Plays an essential role in oocyte and preimplantation embryo development by activating or repressing transcription. Seems to act as tumor suppressor. Plays a critical role in the epigenetic regulation. Participates in the allele-specific gene expression at the imprinted IGF2/H19 gene locus. On the maternal allele, binding within the H19 imprinting control region (ICR) mediates maternally inherited higher-order chromatin conformation to restrict enhancer access to IGF2. Plays a critical role in gene silencing over considerable distances in the genome. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation and maintaining methylation-free zones. Inversely, binding to target sites is prevented by CpG methylation. Plays a important role in chromatin remodeling. Can dimerize when it is bound to different DNA sequences, mediating long-range chromatin looping. Mediates interchromosomal association between IGF2/H19 and WSB1/NF1 and may direct distant DNA segments to a common transcription factory. Causes local loss of histone acetylation and gain of histone methylation in the beta-globin locus, without affecting transcription. When bound to chromatin, it provides an anchor point for nucleosomes positioning. Seems to be essential for homologous X-chromosome pairing. May participate with Tsix in establishing a regulatable epigenetic switch for X chromosome inactivation. May play a role in preventing the propagation of stable methylation at the escape genes from X- inactivation. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites. Regulates asynchronous replication of IGF2/H19.

Homo sapiens (taxid: 9606)

>sp|Q8NI51|CTCFL_HUMAN Transcriptional repressor CTCFL OS=Homo sapiens GN=CTCFL PE=1 SV=2

 Score =  197 bits (501), Expect = 3e-50,   Method: Compositional matrix adjust.
 Identities = 94/165 (56%), Positives = 117/165 (70%), Gaps = 15/165 (9%)

Query: 20  MYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGEL 79
           M    RH+K+H+ E+PH C +C + F+T+  L+NH+NTHTG +P+KC  C   F TSGEL
Sbjct: 269 MSSFNRHMKTHTSEKPHLCHLCLKTFRTVTLLRNHVNTHTGTRPYKCNDCNMAFVTSGEL 328

Query: 80  VRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCA 139
           VRH RYK               HTHEKP KCS+C YASVE SK++ H+RSHTGERP+QC 
Sbjct: 329 VRHRRYK---------------HTHEKPFKCSMCKYASVEASKLKRHVRSHTGERPFQCC 373

Query: 140 HCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRL 184
            C+YAS DT+KLKRH+R H+GEKPY C ICH RFTQS ++K H L
Sbjct: 374 QCSYASRDTYKLKRHMRTHSGEKPYECHICHTRFTQSGTMKIHIL 418

Testis-specific DNA binding protein responsible for insulator function, nuclear architecture and transcriptional control, which probably acts by recruiting epigenetic chromatin modifiers. Plays a key role in gene imprinting in male germline, by participating in the establishment of differential methylation at the IGF2/H19 imprinted control region (ICR). Directly binds the unmethylated H19 ICR and recruits the PRMT7 methyltransferase, leading to methylate histone H4 'Arg-3' to form H4R3sme2. This probably leads to recruit de novo DNA methyltransferases at these sites (By similarity). Seems to act as tumor suppressor. In association with DNMT1 and DNMT3B, involved in activation of BAG1 gene expression by binding to its promoter. Required for dimethylation of H3 lysine 4 (H3K4me2) of MYC and BRCA1 promoters.

Homo sapiens (taxid: 9606)

>sp|A2APF3|CTCFL_MOUSE Transcriptional repressor CTCFL OS=Mus musculus GN=Ctcfl PE=1 SV=1

 Score =  196 bits (498), Expect = 8e-50,   Method: Compositional matrix adjust.
 Identities = 93/158 (58%), Positives = 114/158 (72%), Gaps = 15/158 (9%)

Query: 25  RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVR 84
           RH+K HS ERPH C +C + F+T+  L+NH+NTHTG +PHKC+ C+  F TSGELVRH R
Sbjct: 274 RHIKIHSNERPHLCHLCLKAFRTVTLLRNHVNTHTGTRPHKCRDCDMAFVTSGELVRHRR 333

Query: 85  YKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYA 144
           YK               HT+EKP KCS+C YASVE SKM+ H+RSHTGERP+QC  C YA
Sbjct: 334 YK---------------HTYEKPFKCSLCKYASVEASKMKRHIRSHTGERPFQCCQCAYA 378

Query: 145 SPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSH 182
           S D++KLKRH+R H+GEKPY C  CH RFTQS ++K H
Sbjct: 379 SRDSYKLKRHMRTHSGEKPYECPTCHVRFTQSGTMKIH 416

Testis-specific DNA binding protein responsible for insulator function, nuclear architecture and transcriptional control, which probably acts by recruiting epigenetic chromatin modifiers. Plays a key role in gene imprinting in male germline, by participating in the establishment of differential methylation at the IGF2/H19 imprinted control region (ICR). Directly binds the unmethylated H19 ICR and recruits the PRMT7 methyltransferase, leading to methylate histone H4 'Arg-3' to form H4R3sme2. This probably leads to recruit de novo DNA methyltransferases at these sites. Seems to act as tumor suppressor. In association with DNMT1 and DNMT3B, involved in activation of BAG1 gene expression by binding to its promoter. Required for dimethylation of H3 lysine 4 (H3K4me2) of MYC and BRCA1 promoters.

Mus musculus (taxid: 10090)

>sp|Q9NPA5|ZF64A_HUMAN Zinc finger protein 64 homolog, isoforms 1 and 2 OS=Homo sapiens GN=ZFP64 PE=1 SV=3

 Score =  134 bits (336), Expect = 5e-31,   Method: Compositional matrix adjust.
 Identities = 68/163 (41%), Positives = 95/163 (58%), Gaps = 16/163 (9%)

Query: 20  MYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGEL 79
           M  + RHLK H+ ++PHKC VC + F     L+ H+  HTGVKP+KCK C+     S  L
Sbjct: 159 MKDMERHLKIHTGDKPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSL 218

Query: 80  VRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCA 139
            +H+R                 H+ E+P KC IC YAS   S++  H+RSHTG+ P+QC 
Sbjct: 219 NKHLRI----------------HSDERPFKCQICPYASRNSSQLTVHLRSHTGDAPFQCW 262

Query: 140 HCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSH 182
            C+     +  LKRH+R+H+GEKP+ C+ C+ R T   +LKSH
Sbjct: 263 LCSAKFKISSDLKRHMRVHSGEKPFKCEFCNVRCTMKGNLKSH 305

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q9NW07|ZN358_HUMAN Zinc finger protein 358 OS=Homo sapiens GN=ZNF358 PE=1 SV=2

 Score =  133 bits (335), Expect = 6e-31,   Method: Compositional matrix adjust.
 Identities = 66/165 (40%), Positives = 96/165 (58%), Gaps = 16/165 (9%)

Query: 22  LLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVR 81
           LLA+HL++H   RPHKC VC +GF   ++L  H+ THTG +P+ C  C   F  S  L++
Sbjct: 249 LLAQHLRTHGGPRPHKCPVCAKGFGQGSALLKHLRTHTGERPYPCPQCGKAFGQSSALLQ 308

Query: 82  HVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHC 141
           H R                 HT E+P++C  C  A  + S +++H+R HTGERPY C HC
Sbjct: 309 HQRT----------------HTAERPYRCPHCGKAFGQSSNLQHHLRIHTGERPYACPHC 352

Query: 142 TYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIH 186
           + A   +  L +HL +H+GE+PY C +C   F Q++SL  H+ +H
Sbjct: 353 SKAFGQSSALLQHLHVHSGERPYRCQLCGKAFGQASSLTKHKRVH 397

May be involved in transcriptional regulation.

Homo sapiens (taxid: 9606)

>sp|Q4R6C2|ZN383_MACFA Zinc finger protein 383 OS=Macaca fascicularis GN=ZNF383 PE=2 SV=1

 Score =  131 bits (330), Expect = 3e-30,   Method: Compositional matrix adjust.
 Identities = 75/179 (41%), Positives = 96/179 (53%), Gaps = 16/179 (8%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
           + RHLK H+ E+P +C  C + F   + L  H   HTG KP++CK C   F+    L+ H
Sbjct: 213 VTRHLKIHTGEKPFECKECGKAFSCSSYLSQHQRIHTGKKPYECKECGKAFSYCSNLIDH 272

Query: 83  VRYKHTHEKP--------------ELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMR 128
            R  HT EKP              +L +HVR  HT EKP++C  C  A  + SK+  H R
Sbjct: 273 QRI-HTGEKPYACKVCGKAFTKSSQLFQHVRI-HTGEKPYECKECGKAFTQSSKLVQHQR 330

Query: 129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
            HTGE+PY+C  C  A      L  H RIHTGEKPY C  C   FTQS+ L+ H+ IH 
Sbjct: 331 IHTGEKPYECKECGKAFSSGSALTNHQRIHTGEKPYDCKECGKAFTQSSQLRQHQRIHA 389

May function as a transcriptional repressor, suppressing transcriptional activities mediated by MAPK signaling pathways.

Macaca fascicularis (taxid: 9541)

>sp|P17027|ZNF23_HUMAN Zinc finger protein 23 OS=Homo sapiens GN=ZNF23 PE=2 SV=3

 Score =  130 bits (328), Expect = 4e-30,   Method: Compositional matrix adjust.
 Identities = 74/185 (40%), Positives = 107/185 (57%), Gaps = 16/185 (8%)

Query: 17  YHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTS 76
           ++V   L +H + H+ E+P++C+ C +GF+  + L+ H + HTG KP++CK C   F  +
Sbjct: 317 FNVNAKLIQHQRIHTGEKPYECNECGKGFRCSSQLRQHQSIHTGEKPYQCKECGKGFNNN 376

Query: 77  GELVRHVRYKHTHEKP--------------ELVRHVRYKHTHEKPHKCSICDYASVELSK 122
            +L++H R  HT EKP              +L++H R  HT EKP++C+ C  A    S+
Sbjct: 377 TKLIQHQRI-HTGEKPYECTECGKAFSVKGKLIQHQRI-HTGEKPYECNECGKAFRCNSQ 434

Query: 123 MRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSH 182
            R H+R HTGE+PY+C  C  A     KL RH RIHTGEKP+ C+ C   FT   +L  H
Sbjct: 435 FRQHLRIHTGEKPYECNECGKAFSVNGKLMRHQRIHTGEKPFECNECGRCFTSKRNLLDH 494

Query: 183 RLIHT 187
             IHT
Sbjct: 495 HRIHT 499

May be involved in transcriptional regulation. May have a role in embryonic development.

Homo sapiens (taxid: 9606)

Close Homologs in the Non-Redundant Database Detected by BLAST

Original result of BLAST against Nonredundant Database

GI	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
242022342	785	zinc finger protein, putative [Pediculus	0.883	0.212	0.765	3e-79
427795365	916	Putative transcriptional repressor ctcf,	0.804	0.165	0.754	3e-72
193596515	680	PREDICTED: transcriptional repressor CTC	0.804	0.223	0.778	4e-72
391334118	789	PREDICTED: uncharacterized protein LOC10	0.804	0.192	0.754	4e-72
427788693	875	Putative transcriptional repressor ctcf	0.804	0.173	0.754	5e-72
345495056	709	PREDICTED: transcriptional repressor CTC	0.804	0.214	0.766	7e-72
321456217	700	putative CCCTC-binding factor protein [D	0.804	0.217	0.772	1e-71
332021814	731	Transcriptional repressor CTCF [Acromyrm	0.804	0.207	0.778	2e-71
350404458	752	PREDICTED: hypothetical protein LOC10074	0.804	0.202	0.772	5e-71
405954203	868	Transcriptional repressor CTCF [Crassost	0.804	0.175	0.742	5e-71

>gi|242022342|ref|XP_002431599.1| zinc finger protein, putative [Pediculus humanus corporis] gi|212516907|gb|EEB18861.1| zinc finger protein, putative [Pediculus humanus corporis]

 Score =  299 bits (766), Expect = 3e-79,   Method: Compositional matrix adjust.
 Identities = 144/188 (76%), Positives = 159/188 (84%), Gaps = 21/188 (11%)

Query: 21  YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           YLL+RH+KSHSEERPHKCSVCERGFKT+ASLQNH+NTHTG KPH CK+C+S FTTSGELV
Sbjct: 267 YLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKFCDSAFTTSGELV 326

Query: 81  RHVRYKHTHEKP--------------ELVRHVR-------YKHTHEKPHKCSICDYASVE 119
           RHVRYKHTHEKP              +L RH+R       Y+HTHEKPHKCS+CDYASVE
Sbjct: 327 RHVRYKHTHEKPHRCPECDYASVELSKLKRHIRCHTGERPYQHTHEKPHKCSLCDYASVE 386

Query: 120 LSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSL 179
           LSK+RNH R HTGERPYQC HCTYASPDTFKLKRHLRIHTGEKPY C+ICH+RFTQSNSL
Sbjct: 387 LSKLRNHFRCHTGERPYQCQHCTYASPDTFKLKRHLRIHTGEKPYECEICHSRFTQSNSL 446

Query: 180 KSHRLIHT 187
           K+HRLIH+
Sbjct: 447 KAHRLIHS 454

Source: Pediculus humanus corporis

Species: Pediculus humanus

Genus: Pediculus

Family: Pediculidae

Order: Phthiraptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427795365|gb|JAA63134.1| Putative transcriptional repressor ctcf, partial [Rhipicephalus pulchellus]

 Score =  276 bits (705), Expect = 3e-72,   Method: Compositional matrix adjust.
 Identities = 126/167 (75%), Positives = 144/167 (86%), Gaps = 15/167 (8%)

Query: 21  YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           YLL+RH+KSHSEERPHKCSVCERGFKT+ASLQNH+NTHTG +PH+CK C++ FTTSGELV
Sbjct: 384 YLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTRPHQCKECDAAFTTSGELV 443

Query: 81  RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
           RHVR               Y+HTHEKPH+C+ CDYASVELSK++ HMR HTGERPYQC H
Sbjct: 444 RHVR---------------YRHTHEKPHRCTECDYASVELSKLKRHMRCHTGERPYQCPH 488

Query: 141 CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           CTYASPDT+KLKRHLRIHTGEKPY CD+CHARFTQSNSLK+H+LIH+
Sbjct: 489 CTYASPDTYKLKRHLRIHTGEKPYECDVCHARFTQSNSLKAHKLIHS 535

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|193596515|ref|XP_001944997.1| PREDICTED: transcriptional repressor CTCFL-like isoform 1 [Acyrthosiphon pisum] gi|328719636|ref|XP_003246815.1| PREDICTED: transcriptional repressor CTCFL-like isoform 2 [Acyrthosiphon pisum]

 Score =  276 bits (705), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 130/167 (77%), Positives = 143/167 (85%), Gaps = 15/167 (8%)

Query: 21  YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           YLL+RH+KSHS+ERPHKC+VCERGFKT+ SLQNH+NTHTG KP++C+ C S FTTSGELV
Sbjct: 251 YLLSRHMKSHSKERPHKCTVCERGFKTLTSLQNHVNTHTGTKPYQCRSCPSAFTTSGELV 310

Query: 81  RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
           RHVR               YKHTHEKPHKC+ICDYASVELSKMRNHMR HTGERPYQC H
Sbjct: 311 RHVR---------------YKHTHEKPHKCTICDYASVELSKMRNHMRCHTGERPYQCPH 355

Query: 141 CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           CTYASPDTFKLKRHLRIHTGEKPY CDIC +RFTQSNSLK+HRLIH+
Sbjct: 356 CTYASPDTFKLKRHLRIHTGEKPYECDICFSRFTQSNSLKTHRLIHS 402

Source: Acyrthosiphon pisum

Species: Acyrthosiphon pisum

Genus: Acyrthosiphon

Family: Aphididae

Order: Hemiptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|391334118|ref|XP_003741455.1| PREDICTED: uncharacterized protein LOC100905908 [Metaseiulus occidentalis]

 Score =  276 bits (705), Expect = 4e-72,   Method: Compositional matrix adjust.
 Identities = 126/167 (75%), Positives = 144/167 (86%), Gaps = 15/167 (8%)

Query: 21  YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           YLL+RH+KSHSE+RPHKCSVCERGFKT+ASLQNH+NTHTG +PH+CK C++ FTTSGELV
Sbjct: 296 YLLSRHMKSHSEDRPHKCSVCERGFKTLASLQNHVNTHTGTRPHQCKECDASFTTSGELV 355

Query: 81  RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
           RHVR               YKHTHEKPH+C+ CDYASVELSK++ HMR HTGERPYQC H
Sbjct: 356 RHVR---------------YKHTHEKPHRCTECDYASVELSKLKRHMRCHTGERPYQCPH 400

Query: 141 CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           CTYASPDT+KL+RHLRIHTGEKPY CDICHARFTQSNSL++H+LIHT
Sbjct: 401 CTYASPDTYKLQRHLRIHTGEKPYECDICHARFTQSNSLRAHKLIHT 447

Source: Metaseiulus occidentalis

Species: Metaseiulus occidentalis

Genus: Metaseiulus

Family: Phytoseiidae

Order: Mesostigmata

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|427788693|gb|JAA59798.1| Putative transcriptional repressor ctcf [Rhipicephalus pulchellus]

 Score =  275 bits (704), Expect = 5e-72,   Method: Compositional matrix adjust.
 Identities = 126/167 (75%), Positives = 144/167 (86%), Gaps = 15/167 (8%)

Query: 21  YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           YLL+RH+KSHSEERPHKCSVCERGFKT+ASLQNH+NTHTG +PH+CK C++ FTTSGELV
Sbjct: 343 YLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTRPHQCKECDAAFTTSGELV 402

Query: 81  RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
           RHVR               Y+HTHEKPH+C+ CDYASVELSK++ HMR HTGERPYQC H
Sbjct: 403 RHVR---------------YRHTHEKPHRCTECDYASVELSKLKRHMRCHTGERPYQCPH 447

Query: 141 CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           CTYASPDT+KLKRHLRIHTGEKPY CD+CHARFTQSNSLK+H+LIH+
Sbjct: 448 CTYASPDTYKLKRHLRIHTGEKPYECDVCHARFTQSNSLKAHKLIHS 494

Source: Rhipicephalus pulchellus

Species: Rhipicephalus pulchellus

Genus: Rhipicephalus

Family: Ixodidae

Order: Ixodida

Class: Arachnida

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|345495056|ref|XP_001606075.2| PREDICTED: transcriptional repressor CTCFL-like [Nasonia vitripennis]

 Score =  275 bits (702), Expect = 7e-72,   Method: Compositional matrix adjust.
 Identities = 128/167 (76%), Positives = 143/167 (85%), Gaps = 15/167 (8%)

Query: 21  YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           YLL+RH+KSHSEERPHKCSVCERGFKT+ASLQNH+NTHTG KPH CK+C+S FTTSGELV
Sbjct: 232 YLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHNCKFCDSAFTTSGELV 291

Query: 81  RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
           RHVR               Y+HTHEKPHKC+ CDYASVELSK++ H+R HTGERPYQC H
Sbjct: 292 RHVR---------------YRHTHEKPHKCNDCDYASVELSKLKRHIRCHTGERPYQCPH 336

Query: 141 CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           CTYASPDTFKLKRHLRIHTGEKPY CDIC+ARFTQSNSLK+H+L+H 
Sbjct: 337 CTYASPDTFKLKRHLRIHTGEKPYECDICNARFTQSNSLKAHKLVHN 383

Source: Nasonia vitripennis

Species: Nasonia vitripennis

Genus: Nasonia

Family: Pteromalidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|321456217|gb|EFX67330.1| putative CCCTC-binding factor protein [Daphnia pulex]

 Score =  274 bits (700), Expect = 1e-71,   Method: Compositional matrix adjust.
 Identities = 129/167 (77%), Positives = 143/167 (85%), Gaps = 15/167 (8%)

Query: 21  YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           YLL+RH+K HSEERPHKCSVC+RGFKT+ASLQNH+NTHTG KPH+CK+C S FTTSGELV
Sbjct: 240 YLLSRHMKCHSEERPHKCSVCDRGFKTLASLQNHVNTHTGTKPHRCKHCHSSFTTSGELV 299

Query: 81  RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
           RHVR               Y+HTHEKPH+C+ CDYASVELSK++ HMR HTGERPYQC H
Sbjct: 300 RHVR---------------YRHTHEKPHRCTECDYASVELSKLKRHMRCHTGERPYQCPH 344

Query: 141 CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           CTYASPDTFKLKRHLRIHTGEKPY CDICHARFTQSNSLK+H+LIHT
Sbjct: 345 CTYASPDTFKLKRHLRIHTGEKPYECDICHARFTQSNSLKAHKLIHT 391

Source: Daphnia pulex

Species: Daphnia pulex

Genus: Daphnia

Family: Daphniidae

Order: Diplostraca

Class: Branchiopoda

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|332021814|gb|EGI62160.1| Transcriptional repressor CTCF [Acromyrmex echinatior]

 Score =  273 bits (699), Expect = 2e-71,   Method: Compositional matrix adjust.
 Identities = 130/167 (77%), Positives = 140/167 (83%), Gaps = 15/167 (8%)

Query: 21  YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           YLL+RH+KSHSEERPHKCSVCERGFKT+ASLQNH+NTHTG KPH CKYCES FTTSGELV
Sbjct: 253 YLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHHCKYCESAFTTSGELV 312

Query: 81  RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
           RHVR               Y+HTHEKPHKC  CDYASVELSK++ H+R HTGERPYQC H
Sbjct: 313 RHVR---------------YRHTHEKPHKCHECDYASVELSKLKRHIRCHTGERPYQCPH 357

Query: 141 CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           CTYASPDTFKLKRHLRIHTGEKPY CD C ARFTQSNSLK+H+LIH 
Sbjct: 358 CTYASPDTFKLKRHLRIHTGEKPYECDFCQARFTQSNSLKAHKLIHN 404

Source: Acromyrmex echinatior

Species: Acromyrmex echinatior

Genus: Acromyrmex

Family: Formicidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|350404458|ref|XP_003487111.1| PREDICTED: hypothetical protein LOC100745727 [Bombus impatiens]

 Score =  272 bits (696), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 129/167 (77%), Positives = 140/167 (83%), Gaps = 15/167 (8%)

Query: 21  YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           YLL+RH+KSHSEERPHKCSVCERGFKT+ASLQNH+NTHTG KPH+CK+CES FTTSGELV
Sbjct: 241 YLLSRHMKSHSEERPHKCSVCERGFKTLASLQNHVNTHTGTKPHRCKFCESAFTTSGELV 300

Query: 81  RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
           RHVR               Y+HTHEKPHKC  CDYASVELSK+  H+R HTGERPYQC H
Sbjct: 301 RHVR---------------YRHTHEKPHKCPECDYASVELSKLHRHIRCHTGERPYQCPH 345

Query: 141 CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           CTYASPDTFKLKRHLRIHTGEKPY CD C ARFTQSNSLK+H+LIH 
Sbjct: 346 CTYASPDTFKLKRHLRIHTGEKPYECDFCQARFTQSNSLKAHKLIHN 392

Source: Bombus impatiens

Species: Bombus impatiens

Genus: Bombus

Family: Apidae

Order: Hymenoptera

Class: Insecta

Phylum: Arthropoda

Superkingdom: Eukaryota

>gi|405954203|gb|EKC21709.1| Transcriptional repressor CTCF [Crassostrea gigas]

 Score =  272 bits (696), Expect = 5e-71,   Method: Compositional matrix adjust.
 Identities = 124/167 (74%), Positives = 141/167 (84%), Gaps = 15/167 (8%)

Query: 21  YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           YLL RH+KSHSE++PHKC++C+RGFKT+ASLQNH+NTHTG +PHKCK CES FTTSGELV
Sbjct: 341 YLLMRHMKSHSEDKPHKCNICDRGFKTMASLQNHVNTHTGTRPHKCKECESAFTTSGELV 400

Query: 81  RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
           RH+R               YKHT EKPHKC+ C+YASVELSK++ HMRSHTGERPYQC H
Sbjct: 401 RHIR---------------YKHTFEKPHKCTECEYASVELSKLKRHMRSHTGERPYQCMH 445

Query: 141 CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           C YASPDT+KLKRHLRIHTGEKPY CDIC ARFTQSNSLK+H+LIHT
Sbjct: 446 CNYASPDTYKLKRHLRIHTGEKPYICDICQARFTQSNSLKAHKLIHT 492

Source: Crassostrea gigas

Species: Crassostrea gigas

Genus: Crassostrea

Family: Ostreidae

Order: Ostreoida

Class: Bivalvia

Phylum: Mollusca

Superkingdom: Eukaryota

---

Prediction of Gene Ontology (GO) Terms

Close Homologs with Gene Ontology terms Detected by BLAST

Original result of BLAST against Gene Ontology (AMIGO)

ID	Length	Definition	Q cover	H cover	Identity	E-value
Query	189
FB|FBgn0035769	818	CTCF "CTCF" [Drosophila melano	0.804	0.185	0.652	2.2e-57
ZFIN|ZDB-GENE-040624-5	798	ctcf "CCCTC-binding factor (zi	0.793	0.187	0.626	1.4e-55
UNIPROTKB|F1NFT1	728	CTCF "Transcriptional represso	0.793	0.206	0.626	1.4e-55
UNIPROTKB|Q08705	728	CTCF "Transcriptional represso	0.793	0.206	0.626	1.4e-55
UNIPROTKB|Q08DH9	727	CTCF "Uncharacterized protein"	0.793	0.206	0.626	1.4e-55
UNIPROTKB|E2RJR9	728	CTCF "Uncharacterized protein"	0.793	0.206	0.626	1.4e-55
UNIPROTKB|P49711	727	CTCF "Transcriptional represso	0.793	0.206	0.626	1.4e-55
MGI|MGI:109447	736	Ctcf "CCCTC-binding factor" [M	0.793	0.203	0.626	1.4e-55
RGD|621344	737	Ctcf "CCCTC-binding factor (zi	0.793	0.203	0.626	1.4e-55
UNIPROTKB|Q9R1D1	737	Ctcf "Transcriptional represso	0.793	0.203	0.626	1.4e-55

FB|FBgn0035769 CTCF "CTCF" [Drosophila melanogaster (taxid:7227)]

 Score = 590 (212.7 bits), Expect = 2.2e-57, P = 2.2e-57
 Identities = 109/167 (65%), Positives = 123/167 (73%)

Query:    21 YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
             +L+ RH +SH  E   KCS+CER F++   LQNHINTH G KPHKCK CES FTTSGELV
Sbjct:   307 FLITRHSRSHDVEPSFKCSICERSFRSNVGLQNHINTHMGNKPHKCKLCESAFTTSGELV 366

Query:    81 RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
             RH RYKHT EKP               HKC+ C YASVEL+K+R HM  HTGERPYQC H
Sbjct:   367 RHTRYKHTKEKP---------------HKCTECTYASVELTKLRRHMTCHTGERPYQCPH 411

Query:   141 CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
             CTYAS D FKLKRH+ IHTGEK Y CDIC +RFTQSNSLK+H+LIH+
Sbjct:   412 CTYASQDMFKLKRHMVIHTGEKKYQCDICKSRFTQSNSLKAHKLIHS 458

GO:0005634 "nucleus" evidence=ISS;IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISS

GO:0008270 "zinc ion binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0043035 "chromatin insulator sequence binding" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0007379 "segment specification" evidence=IMP

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IMP

GO:0043007 "maintenance of rDNA" evidence=IDA

ZFIN|ZDB-GENE-040624-5 ctcf "CCCTC-binding factor (zinc finger protein)" [Danio rerio (taxid:7955)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 104/166 (62%), Positives = 127/166 (76%)

Query:    23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
             L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct:   321 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCTDCDMAFVTSGELVRH 380

Query:    83 VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
                          R  RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct:   381 -------------R--RYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 425

Query:   143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI-HT 187
             YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L  HT
Sbjct:   426 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 471

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

UNIPROTKB|F1NFT1 CTCF "Transcriptional repressor CTCF" [Gallus gallus (taxid:9031)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 104/166 (62%), Positives = 127/166 (76%)

Query:    23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
             L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct:   281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query:    83 VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
                          R  RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct:   341 -------------R--RYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query:   143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI-HT 187
             YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L  HT
Sbjct:   386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 431

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0005622 "intracellular" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|Q08705 CTCF "Transcriptional repressor CTCF" [Gallus gallus (taxid:9031)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 104/166 (62%), Positives = 127/166 (76%)

Query:    23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
             L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct:   281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query:    83 VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
                          R  RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct:   341 -------------R--RYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query:   143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI-HT 187
             YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L  HT
Sbjct:   386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 431

GO:0008270 "zinc ion binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IEA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IEA

GO:0005634 "nucleus" evidence=IEA

GO:0005515 "protein binding" evidence=IPI

UNIPROTKB|Q08DH9 CTCF "Uncharacterized protein" [Bos taurus (taxid:9913)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 104/166 (62%), Positives = 127/166 (76%)

Query:    23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
             L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct:   281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query:    83 VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
                          R  RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct:   341 -------------R--RYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query:   143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI-HT 187
             YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L  HT
Sbjct:   386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 431

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0043035 "chromatin insulator sequence binding" evidence=IEA

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0000793 "condensed chromosome" evidence=IEA

GO:0000775 "chromosome, centromeric region" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|E2RJR9 CTCF "Uncharacterized protein" [Canis lupus familiaris (taxid:9615)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 104/166 (62%), Positives = 127/166 (76%)

Query:    23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
             L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct:   281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query:    83 VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
                          R  RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct:   341 -------------R--RYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query:   143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI-HT 187
             YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L  HT
Sbjct:   386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 431

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0043035 "chromatin insulator sequence binding" evidence=IEA

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0005654 "nucleoplasm" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA

GO:0000793 "condensed chromosome" evidence=IEA

GO:0000775 "chromosome, centromeric region" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

UNIPROTKB|P49711 CTCF "Transcriptional repressor CTCF" [Homo sapiens (taxid:9606)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 104/166 (62%), Positives = 127/166 (76%)

Query:    23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
             L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct:   281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query:    83 VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
                          R  RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct:   341 -------------R--RYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query:   143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI-HT 187
             YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L  HT
Sbjct:   386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 431

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0016568 "chromatin modification" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IDA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IDA

GO:0005634 "nucleus" evidence=IDA

GO:0008270 "zinc ion binding" evidence=TAS

GO:0005730 "nucleolus" evidence=IDA

GO:0005654 "nucleoplasm" evidence=IDA

GO:0000793 "condensed chromosome" evidence=IDA

GO:0000775 "chromosome, centromeric region" evidence=IDA

GO:0070602 "regulation of centromeric sister chromatid cohesion" evidence=NAS

GO:0010628 "positive regulation of gene expression" evidence=IMP

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IMP;IDA

GO:0016584 "nucleosome positioning" evidence=IDA

GO:0043035 "chromatin insulator sequence binding" evidence=IDA

GO:0044212 "transcription regulatory region DNA binding" evidence=IDA

GO:0043565 "sequence-specific DNA binding" evidence=IDA

GO:0040029 "regulation of gene expression, epigenetic" evidence=IMP

GO:0040030 "regulation of molecular function, epigenetic" evidence=IMP

GO:0005515 "protein binding" evidence=IPI

GO:0003714 "transcription corepressor activity" evidence=TAS

MGI|MGI:109447 Ctcf "CCCTC-binding factor" [Mus musculus (taxid:10090)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 104/166 (62%), Positives = 127/166 (76%)

Query:    23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
             L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct:   281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query:    83 VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
                          R  RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct:   341 -------------R--RYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query:   143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI-HT 187
             YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L  HT
Sbjct:   386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 431

GO:0000775 "chromosome, centromeric region" evidence=ISO

GO:0000793 "condensed chromosome" evidence=ISO

GO:0003676 "nucleic acid binding" evidence=IEA

GO:0003677 "DNA binding" evidence=IDA

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=ISO

GO:0005515 "protein binding" evidence=IPI

GO:0005622 "intracellular" evidence=IEA

GO:0005634 "nucleus" evidence=ISO;IDA

GO:0005654 "nucleoplasm" evidence=ISO

GO:0005694 "chromosome" evidence=IEA

GO:0005730 "nucleolus" evidence=ISO

GO:0006306 "DNA methylation" evidence=IDA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IMP;IDA

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=IDA

GO:0007059 "chromosome segregation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0009048 "dosage compensation by inactivation of X chromosome" evidence=TAS

GO:0010216 "maintenance of DNA methylation" evidence=IMP

GO:0010628 "positive regulation of gene expression" evidence=ISO;IMP

GO:0010629 "negative regulation of gene expression" evidence=IMP

GO:0016568 "chromatin modification" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=ISO

GO:0031060 "regulation of histone methylation" evidence=IMP

GO:0035065 "regulation of histone acetylation" evidence=IMP

GO:0040029 "regulation of gene expression, epigenetic" evidence=ISO

GO:0040030 "regulation of molecular function, epigenetic" evidence=ISO

GO:0043035 "chromatin insulator sequence binding" evidence=ISO

GO:0043565 "sequence-specific DNA binding" evidence=ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=ISO

GO:0046872 "metal ion binding" evidence=IEA

RGD|621344 Ctcf "CCCTC-binding factor (zinc finger protein)" [Rattus norvegicus (taxid:10116)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 104/166 (62%), Positives = 127/166 (76%)

Query:    23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
             L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct:   281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query:    83 VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
                          R  RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct:   341 -------------R--RYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query:   143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI-HT 187
             YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L  HT
Sbjct:   386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 431

GO:0000775 "chromosome, centromeric region" evidence=IEA;ISO

GO:0000793 "condensed chromosome" evidence=IEA;ISO

GO:0003677 "DNA binding" evidence=ISO;TAS

GO:0003700 "sequence-specific DNA binding transcription factor activity" evidence=IEA;ISO;TAS

GO:0005634 "nucleus" evidence=ISO

GO:0005654 "nucleoplasm" evidence=IEA;ISO

GO:0005730 "nucleolus" evidence=IEA;ISO

GO:0006306 "DNA methylation" evidence=ISO

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA;ISO

GO:0006351 "transcription, DNA-dependent" evidence=IEA

GO:0006355 "regulation of transcription, DNA-dependent" evidence=ISO

GO:0007059 "chromosome segregation" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA;ISO

GO:0010628 "positive regulation of gene expression" evidence=ISO

GO:0010629 "negative regulation of gene expression" evidence=ISO

GO:0016568 "chromatin modification" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA;ISO

GO:0031060 "regulation of histone methylation" evidence=IEA;ISO

GO:0035065 "regulation of histone acetylation" evidence=IEA;ISO

GO:0040029 "regulation of gene expression, epigenetic" evidence=ISO

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA;ISO

GO:0043035 "chromatin insulator sequence binding" evidence=IEA;ISO

GO:0043565 "sequence-specific DNA binding" evidence=IEA;ISO

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA;ISO

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA;ISO

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA;ISO

UNIPROTKB|Q9R1D1 Ctcf "Transcriptional repressor CTCF" [Rattus norvegicus (taxid:10116)]

 Score = 573 (206.8 bits), Expect = 1.4e-55, P = 1.4e-55
 Identities = 104/166 (62%), Positives = 127/166 (76%)

Query:    23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
             L RH+KSH++ERPHKC +C R F+T+  L+NH+NTHTG +PHKC  C+  F TSGELVRH
Sbjct:   281 LDRHMKSHTDERPHKCHLCGRAFRTVTLLRNHLNTHTGTRPHKCPDCDMAFVTSGELVRH 340

Query:    83 VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
                          R  RYKHTHEKP KCS+CDYASVE+SK++ H+RSHTGERP+QC+ C+
Sbjct:   341 -------------R--RYKHTHEKPFKCSMCDYASVEVSKLKRHIRSHTGERPFQCSLCS 385

Query:   143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI-HT 187
             YAS DT+KLKRH+R H+GEKPY C ICHARFTQS ++K H L  HT
Sbjct:   386 YASRDTYKLKRHMRTHSGEKPYECYICHARFTQSGTMKMHILQKHT 431

GO:0000793 "condensed chromosome" evidence=IEA

GO:0005730 "nucleolus" evidence=IEA

GO:0006349 "regulation of gene expression by genetic imprinting" evidence=IEA

GO:0008270 "zinc ion binding" evidence=IEA

GO:0010216 "maintenance of DNA methylation" evidence=IEA

GO:0016584 "nucleosome positioning" evidence=IEA

GO:0031060 "regulation of histone methylation" evidence=IEA

GO:0035065 "regulation of histone acetylation" evidence=IEA

GO:0040030 "regulation of molecular function, epigenetic" evidence=IEA

GO:0043035 "chromatin insulator sequence binding" evidence=IEA

GO:0043565 "sequence-specific DNA binding" evidence=IEA

GO:0044212 "transcription regulatory region DNA binding" evidence=IEA

GO:0045892 "negative regulation of transcription, DNA-dependent" evidence=IEA

GO:0045893 "positive regulation of transcription, DNA-dependent" evidence=IEA

---

Prediction of Enzyme Commission (EC) Number

EC Number Prediction by Annotation Transfer from SWISS-PROT Entries

Original result of BLAST against SWISS-PROT

ID	Name	Annotated EC number	Identity	Query coverage	Hit coverage	RBH(Q2H)	RBH(H2Q)
Q9R1D1	CTCF_RAT	No assigned EC number	0.6234	0.7777	0.1994	yes	N/A
Q08705	CTCF_CHICK	No assigned EC number	0.6234	0.7777	0.2019	yes	N/A
P49711	CTCF_HUMAN	No assigned EC number	0.6234	0.7777	0.2022	yes	N/A
Q61164	CTCF_MOUSE	No assigned EC number	0.6234	0.7777	0.1997	yes	N/A

EC Number Prediction by EFICAz Software

No EC number assignment, probably not an enzyme!

---

Conserved Domains and Related Protein Families

Conserved Domains Detected by RPS-BLAST

Original result of RPS-BLAST against CDD database

ID	Length	Definition	E-value
Query	189
pfam13465	26	pfam13465, zf-H2C2_2, Zinc-finger double domain	0.002

>gnl|CDD|222150 pfam13465, zf-H2C2_2, Zinc-finger double domain

 Score = 34.3 bits (79), Expect = 0.002
 Identities = 14/25 (56%), Positives = 18/25 (72%)

Query: 151 LKRHLRIHTGEKPYACDICHARFTQ 175
           L+RH+R HTGEKPY C +C   F+ 
Sbjct: 2   LRRHMRTHTGEKPYKCPVCGKSFSS 26

Length = 26

Conserved Domains Detected by HHsearch

Original result of HHsearch against CDD database

ID	Length	Definition	Probability
Query	189
KOG2462|consensus	279		99.97
KOG2462|consensus	279		99.95
KOG3623|consensus	1007		99.88
KOG1074|consensus	958		99.86
KOG1074|consensus	958		99.86
KOG3608|consensus	467		99.86
KOG3608|consensus	467		99.81
KOG3576|consensus	267		99.75
KOG3576|consensus	267		99.69
KOG3623|consensus	1007		99.58
PLN03086	567	PRLI-interacting factor K; Provisional	99.39
KOG3993|consensus	500		99.38
PHA00733	128	hypothetical protein	99.37
PHA00733	128	hypothetical protein	99.17
PLN03086	567	PRLI-interacting factor K; Provisional	99.13
PHA02768	55	hypothetical protein; Provisional	99.11
PHA02768	55	hypothetical protein; Provisional	98.93
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.82
KOG3993|consensus	500		98.67
PHA00616	44	hypothetical protein	98.58
PHA00732	79	hypothetical protein	98.57
PF13465	26	zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A	98.56
PHA00616	44	hypothetical protein	98.45
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.42
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	98.35
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	98.29
PHA00732	79	hypothetical protein	98.22
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	98.22
PF05605	54	zf-Di19: Drought induced 19 protein (Di19), zinc-b	98.1
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	98.03
PF00096	23	zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR0070	97.89
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	97.77
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.74
smart00355	26	ZnF_C2H2 zinc finger.	97.63
PF13894	24	zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP	97.59
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	97.59
PF12756	100	zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB:	97.54
PF13912	27	zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9	97.48
COG5189	423	SFP1 Putative transcriptional repressor regulating	97.37
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	97.18
PF09237	54	GAGA: GAGA factor; InterPro: IPR015318 Zinc finger	96.98
smart00355	26	ZnF_C2H2 zinc finger.	96.97
PRK04860	160	hypothetical protein; Provisional	96.85
PF12874	25	zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG	96.66
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	96.63
PRK04860	160	hypothetical protein; Provisional	96.09
KOG1146|consensus	1406		96.09
PF13909	24	zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W	96.07
KOG1146|consensus	1406		96.01
PF12171	27	zf-C2H2_jaz: Zinc-finger double-stranded RNA-bindi	95.92
KOG2785|consensus	390		95.72
PF13913	25	zf-C2HC_2: zinc-finger of a C2HC-type	95.71
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	95.71
KOG2893|consensus	341		95.58
KOG2231|consensus	669		95.48
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	94.94
KOG2893|consensus	341		94.62
KOG2482|consensus	423		94.51
cd00350	33	rubredoxin_like Rubredoxin_like; nonheme iron bind	94.44
COG5048	467	FOG: Zn-finger [General function prediction only]	94.38
KOG4173|consensus	253		94.11
smart00451	35	ZnF_U1 U1-like zinc finger. Family of C2H2-type zi	93.71
COG4049	65	Uncharacterized protein containing archaeal-type C	93.53
KOG2231|consensus	669		92.92
PF10571	26	UPF0547: Uncharacterised protein family UPF0547; I	91.99
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	91.54
cd00729	34	rubredoxin_SM Rubredoxin, Small Modular nonheme ir	91.15
COG4049	65	Uncharacterized protein containing archaeal-type C	91.13
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	90.91
PF13719	37	zinc_ribbon_5: zinc-ribbon domain	90.86
KOG2785|consensus	390		90.65
COG5048	467	FOG: Zn-finger [General function prediction only]	90.59
TIGR00622	112	ssl1 transcription factor ssl1. This family is bas	90.57
PF05443	132	ROS_MUCR: ROS/MUCR transcriptional regulator prote	90.41
PF13717	36	zinc_ribbon_4: zinc-ribbon domain	90.23
PF02892	45	zf-BED: BED zinc finger; InterPro: IPR003656 Zinc	89.79
smart00531	147	TFIIE Transcription initiation factor IIE.	89.38
COG1592	166	Rubrerythrin [Energy production and conversion]	88.73
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	88.42
TIGR02098	38	MJ0042_CXXC MJ0042 family finger-like domain. This	88.26
KOG2482|consensus	423		88.24
PF09538	108	FYDLN_acid: Protein of unknown function (FYDLN_aci	87.93
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	87.91
smart00531	147	TFIIE Transcription initiation factor IIE.	87.56
smart00614	50	ZnF_BED BED zinc finger. DNA-binding domain in chr	87.21
PRK06266	178	transcription initiation factor E subunit alpha; V	87.15
smart00734	26	ZnF_Rad18 Rad18-like CCHC zinc finger. Yeast Rad18	86.84
TIGR00373	158	conserved hypothetical protein TIGR00373. This fam	86.19
PHA00626	59	hypothetical protein	85.83
PF12013	109	DUF3505: Protein of unknown function (DUF3505); In	84.91
PF09986	214	DUF2225: Uncharacterized protein conserved in bact	84.87
COG5236	493	Uncharacterized conserved protein, contains RING Z	83.97
COG1592	166	Rubrerythrin [Energy production and conversion]	83.89
COG2888	61	Predicted Zn-ribbon RNA-binding protein with a fun	83.6
PRK06266	178	transcription initiation factor E subunit alpha; V	83.32
PF14369	35	zf-RING_3: zinc-finger	83.14
smart00659	44	RPOLCX RNA polymerase subunit CX. present in RNA p	82.42
TIGR02300	129	FYDLN_acid conserved hypothetical protein TIGR0230	82.4
COG5151	421	SSL1 RNA polymerase II transcription initiation/nu	81.28
PRK00464	154	nrdR transcriptional regulator NrdR; Validated	81.12
PRK00398	46	rpoP DNA-directed RNA polymerase subunit P; Provis	80.98
PRK14890	59	putative Zn-ribbon RNA-binding protein; Provisiona	80.84
PF03604	32	DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa	80.64
smart00834	41	CxxC_CXXC_SSSS Putative regulatory protein. CxxC_C	80.14

>KOG2462|consensus

Probab=99.97  E-value=1.4e-30  Score=179.49  Aligned_cols=136  Identities=31%  Similarity=0.626  Sum_probs=125.6

Q ss_pred             CCCcccCCCCCccccchhhHHHHHhhcCC---CCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCc
Q psy9067          32 EERPHKCSVCERGFKTIASLQNHINTHTG---VKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPH  108 (189)
Q Consensus        32 ~~~~~~C~~C~~~f~~~~~l~~H~~~~~~---~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~  108 (189)
                      ....|.|+.||+.+...++|..|...|..   .+.+.|..|++.|.+...|..|+++|                  .-+.
T Consensus       127 ~~~r~~c~eCgk~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH------------------~l~c  188 (279)
T KOG2462|consen  127 KHPRYKCPECGKSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTH------------------TLPC  188 (279)
T ss_pred             cCCceeccccccccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhcc------------------CCCc
Confidence            34568999999999999999999998854   45699999999999999999999862                  2468


Q ss_pred             cCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhh
Q psy9067         109 KCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI  185 (189)
Q Consensus       109 ~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  185 (189)
                      .|.+|||.|...+.|+-|+++|+|||||.|+.|+++|.-++.|+.|+++|++.+.|+|..|++.|+..+.|.+|...
T Consensus       189 ~C~iCGKaFSRPWLLQGHiRTHTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES  265 (279)
T KOG2462|consen  189 ECGICGKAFSRPWLLQGHIRTHTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSES  265 (279)
T ss_pred             ccccccccccchHHhhcccccccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhh
Confidence            99999999999999999999999999999999999999999999999999999999999999999999999999753

>KOG2462|consensus

Probab=99.95  E-value=2.9e-28  Score=168.13  Aligned_cols=135  Identities=30%  Similarity=0.539  Sum_probs=127.0

Q ss_pred             EEeeeCCCcceeeechhHHHHHHhhCCC---CCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHh
Q psy9067           5 IYYWSDTTGYLRYHVMYLLARHLKSHSE---ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVR   81 (189)
Q Consensus         5 ~~~~c~~c~~~~f~~~~~l~~h~~~~~~---~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~   81 (189)
                      ..|.|+.|+ ..|.+...|.+|.++|..   ++.+.|+.|++.|-+...|.+|.++|.  -+++|.+||+.|...+.|+.
T Consensus       129 ~r~~c~eCg-k~ysT~snLsrHkQ~H~~~~s~ka~~C~~C~K~YvSmpALkMHirTH~--l~c~C~iCGKaFSRPWLLQG  205 (279)
T KOG2462|consen  129 PRYKCPECG-KSYSTSSNLSRHKQTHRSLDSKKAFSCKYCGKVYVSMPALKMHIRTHT--LPCECGICGKAFSRPWLLQG  205 (279)
T ss_pred             Cceeccccc-cccccccccchhhcccccccccccccCCCCCceeeehHHHhhHhhccC--CCcccccccccccchHHhhc
Confidence            458999999 799999999999999985   567899999999999999999999986  78999999999999999999


Q ss_pred             hhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHh
Q psy9067          82 HVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIH  158 (189)
Q Consensus        82 h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  158 (189)
                      |+++                +.+++||.|+.|+++|.++++|+.|+++|.+.|+|.|..|++.|..++.|..|....
T Consensus       206 HiRT----------------HTGEKPF~C~hC~kAFADRSNLRAHmQTHS~~K~~qC~~C~KsFsl~SyLnKH~ES~  266 (279)
T KOG2462|consen  206 HIRT----------------HTGEKPFSCPHCGKAFADRSNLRAHMQTHSDVKKHQCPRCGKSFALKSYLNKHSESA  266 (279)
T ss_pred             cccc----------------ccCCCCccCCcccchhcchHHHHHHHHhhcCCccccCcchhhHHHHHHHHHHhhhhc
Confidence            9994                899999999999999999999999999999999999999999999999999998753

>KOG3623|consensus

Probab=99.88  E-value=2.6e-23  Score=159.73  Aligned_cols=81  Identities=38%  Similarity=0.727  Sum_probs=77.0

Q ss_pred             CCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHH
Q psy9067         104 HEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHR  183 (189)
Q Consensus       104 ~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~  183 (189)
                      .+..|.|+.|+|+|.-.++|.+|.-.|.|.+||+|.+|.++|..+-.|..|.+.|+||+||+|..|++.|+.+-....||
T Consensus       891 e~gmyaCDqCDK~FqKqSSLaRHKYEHsGqRPyqC~iCkKAFKHKHHLtEHkRLHSGEKPfQCdKClKRFSHSGSYSQHM  970 (1007)
T KOG3623|consen  891 EDGMYACDQCDKAFQKQSSLARHKYEHSGQRPYQCIICKKAFKHKHHLTEHKRLHSGEKPFQCDKCLKRFSHSGSYSQHM  970 (1007)
T ss_pred             ccccchHHHHHHHHHhhHHHHHhhhhhcCCCCcccchhhHhhhhhhhhhhhhhhccCCCcchhhhhhhhcccccchHhhh
Confidence            34459999999999999999999999999999999999999999999999999999999999999999999999999998


Q ss_pred             h
Q psy9067         184 L  184 (189)
Q Consensus       184 ~  184 (189)
                      .
T Consensus       971 N  971 (1007)
T KOG3623|consen  971 N  971 (1007)
T ss_pred             c
Confidence            4

>KOG1074|consensus

Probab=99.86  E-value=3.5e-23  Score=161.10  Aligned_cols=82  Identities=35%  Similarity=0.691  Sum_probs=71.3

Q ss_pred             CccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhC----CCcccCc---cchhccCCchHH
Q psy9067         107 PHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTG----EKPYACD---ICHARFTQSNSL  179 (189)
Q Consensus       107 ~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~----~~~~~C~---~C~~~f~~~~~l  179 (189)
                      +-+|-+|.+...-.+.|+.|.++|.|++||+|.|||++|.++..|+.|+.+|..    +.++.|+   +|-+.|...-.|
T Consensus       605 PNqCiiC~rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~l  684 (958)
T KOG1074|consen  605 PNQCIICLRVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTL  684 (958)
T ss_pred             ccceeeeeecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhcccccccccc
Confidence            357889999999999999999999999999999999999999999999988754    3568899   999999998889


Q ss_pred             HHHHhhhCC
Q psy9067         180 KSHRLIHTP  188 (189)
Q Consensus       180 ~~H~~~h~~  188 (189)
                      ..|+++|.|
T Consensus       685 pQhIriH~~  693 (958)
T KOG1074|consen  685 PQHIRIHLG  693 (958)
T ss_pred             cceEEeecC
Confidence            899888863

>KOG1074|consensus

Probab=99.86  E-value=1.5e-22  Score=157.61  Aligned_cols=177  Identities=24%  Similarity=0.437  Sum_probs=134.7

Q ss_pred             eeCCCcceeeechhHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCC----CCcccc---cCcccCCChhHHH
Q psy9067           8 WSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGV----KPHKCK---YCESRFTTSGELV   80 (189)
Q Consensus         8 ~c~~c~~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~----~~~~C~---~C~~~f~~~~~l~   80 (189)
                      .|=+|- .+.....+|.+|.++|++++||+|.+||+-|..+.+|..||..|...    .+|.|+   +|.+.|...-.|.
T Consensus       607 qCiiC~-rVlSC~saLqmHyrtHtGERPFkCKiCgRAFtTkGNLkaH~~vHka~p~~R~q~ScP~~~ic~~kftn~V~lp  685 (958)
T KOG1074|consen  607 QCIICL-RVLSCPSALQMHYRTHTGERPFKCKICGRAFTTKGNLKAHMSVHKAKPPARVQFSCPSTFICQKKFTNAVTLP  685 (958)
T ss_pred             ceeeee-ecccchhhhhhhhhcccCcCccccccccchhccccchhhcccccccCccccccccCCchhhhccccccccccc
Confidence            355666 68899999999999999999999999999999999999999887543    458999   9999999999999


Q ss_pred             hhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCC---------------------------
Q psy9067          81 RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGE---------------------------  133 (189)
Q Consensus        81 ~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~---------------------------  133 (189)
                      .|++.|-....+.-....   ....-.-+|..|.+.|.+...|..++..+.+.                           
T Consensus       686 QhIriH~~~~~s~g~~a~---e~~~~adq~~~~qk~~~~a~~f~~~~se~~~~~s~~~~~~~~~t~t~~~~~tp~~~e~~  762 (958)
T KOG1074|consen  686 QHIRIHLGGQISNGGTAA---EGILAADQCSSCQKTFSDARSFSQQISEQPSPESEPDEQMDERTETEELDVTPPPPENS  762 (958)
T ss_pred             ceEEeecCCCCCCCcccc---cccchhcccchhhhcccccccchhhhhccCCcccCCcccccccccccccccCCCccccc
Confidence            999986655543110000   00000123444444444443333333222100                           


Q ss_pred             --------------------------------------------------------------------------------
Q psy9067         134 --------------------------------------------------------------------------------  133 (189)
Q Consensus       134 --------------------------------------------------------------------------------  133 (189)
                                                                                                      
T Consensus       763 ~~~~~~~e~~i~~~g~te~asa~~~~vg~~s~~~~~~~~~~T~~k~~~~~~~~~~~~~~~v~~~pvl~~~~~~~l~eg~~  842 (958)
T KOG1074|consen  763 CGRELEGEMAISVRGSTEEASANLDEVGTVSAAGEAGEEDDTSEKPTQASSFPGEILAPSVNMDPVLWNQETSMLNEGLA  842 (958)
T ss_pred             cccccCcccccccccchhhhhcChhhhcCccccchhhhhcccCCCCcccccCCCcCCccccccCchhhcccccccccccc
Confidence                                                                                            


Q ss_pred             -----------------------------------CCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchH
Q psy9067         134 -----------------------------------RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNS  178 (189)
Q Consensus       134 -----------------------------------~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~  178 (189)
                                                         ....|.+||+.|.+...|..|+++|++++||.|.+|++.|.++.+
T Consensus       843 t~~n~~t~~~~~~sv~qs~~~p~l~p~l~~~~pvnn~h~C~vCgk~FsSSsALqiH~rTHtg~KPF~C~fC~~aFttrgn  922 (958)
T KOG1074|consen  843 TKTNEITPEGPADSVIQSGGVPTLEPSLGRPGPVNNAHVCNVCGKQFSSSAALEIHMRTHTGPKPFFCHFCEEAFTTRGN  922 (958)
T ss_pred             cccccccCCCcchhhhhhccccccCCCCCCCCcccchhhhccchhcccchHHHHHhhhcCCCCCCccchhhhhhhhhhhh
Confidence                                               227899999999999999999999999999999999999999999


Q ss_pred             HHHHHhhhCC
Q psy9067         179 LKSHRLIHTP  188 (189)
Q Consensus       179 l~~H~~~h~~  188 (189)
                      |+.||.+|..
T Consensus       923 LKvHMgtH~w  932 (958)
T KOG1074|consen  923 LKVHMGTHMW  932 (958)
T ss_pred             hhhhhccccc
Confidence            9999999853

>KOG3608|consensus

Probab=99.86  E-value=1.3e-21  Score=139.37  Aligned_cols=174  Identities=31%  Similarity=0.602  Sum_probs=142.4

Q ss_pred             eeeechhHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcC--CCCCcccccCcccCCChhHHHhhhhhhcCC---
Q psy9067          15 LRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHT--GVKPHKCKYCESRFTTSGELVRHVRYKHTH---   89 (189)
Q Consensus        15 ~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~--~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~---   89 (189)
                      ..|.+...|++|+++|+++|..-|+.||..|+.+..|..|.+..+  ...+|.|..|.+.|..+..|..|+..|-..   
T Consensus       187 ~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tkl~DH~rRqt~l~~n~fqC~~C~KrFaTeklL~~Hv~rHvn~ykC  266 (467)
T KOG3608|consen  187 KHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTKLFDHLRRQTELNTNSFQCAQCFKRFATEKLLKSHVVRHVNCYKC  266 (467)
T ss_pred             hhhccHHHHHHHHHhcCCCeEEecchHHHHhccccHHHHHHHhhhhhcCCchHHHHHHHHHhHHHHHHHHHHHhhhcccc
Confidence            468899999999999999999999999999999999999988754  345788888888888888888888763321   


Q ss_pred             --------CchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCcc--CCccCCChHHHHHHHHHhh
Q psy9067          90 --------EKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus        90 --------~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~  159 (189)
                              ..+++..+.+..++.++++.|+.|++.+...+.|.+|...|. +-.|.|..  |..+|++...++.|.+-++
T Consensus       267 plCdmtc~~~ssL~~H~r~rHs~dkpfKCd~Cd~~c~~esdL~kH~~~HS-~~~y~C~h~~C~~s~r~~~q~~~H~~evh  345 (467)
T KOG3608|consen  267 PLCDMTCSSASSLTTHIRYRHSKDKPFKCDECDTRCVRESDLAKHVQVHS-KTVYQCEHPDCHYSVRTYTQMRRHFLEVH  345 (467)
T ss_pred             cccccCCCChHHHHHHHHhhhccCCCccccchhhhhccHHHHHHHHHhcc-ccceecCCCCCcHHHHHHHHHHHHHHHhc
Confidence                    123556666667888889999999999999999999988775 66788876  8888888888888876543


Q ss_pred             -C--CCcccCccchhccCCchHHHHHHhhhCCC
Q psy9067         160 -G--EKPYACDICHARFTQSNSLKSHRLIHTPL  189 (189)
Q Consensus       160 -~--~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  189 (189)
                       +  +-+|+|..|.+.|++-.+|.+|++..|++
T Consensus       346 Eg~np~~Y~CH~Cdr~ft~G~~L~~HL~kkH~f  378 (467)
T KOG3608|consen  346 EGNNPILYACHCCDRFFTSGKSLSAHLMKKHGF  378 (467)
T ss_pred             cCCCCCceeeecchhhhccchhHHHHHHHhhcc
Confidence             4  44699999999999999999998766654

>KOG3608|consensus

Probab=99.81  E-value=2.8e-20  Score=132.58  Aligned_cols=157  Identities=25%  Similarity=0.538  Sum_probs=113.3

Q ss_pred             ceeeechhHHHHHHhhCCC------------CCc-ccCCC--CCccccchhhHHHHHhhcCCCCCcccccCcccCCChhH
Q psy9067          14 YLRYHVMYLLARHLKSHSE------------ERP-HKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGE   78 (189)
Q Consensus        14 ~~~f~~~~~l~~h~~~~~~------------~~~-~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~   78 (189)
                      +..|.+..-+..|...|.-            ++| +.|.|  |.+.+.++..|.+|.+.|.+++...|+.|+.-|..+..
T Consensus       143 e~~F~s~~ef~dHV~~H~l~ceyd~~~~~~D~~pv~~C~W~~Ct~~~~~k~~LreH~r~Hs~eKvvACp~Cg~~F~~~tk  222 (467)
T KOG3608|consen  143 EREFVSIVEFQDHVVKHALFCEYDIQKTPEDERPVTMCNWAMCTKHMGNKYRLREHIRTHSNEKVVACPHCGELFRTKTK  222 (467)
T ss_pred             CCcccCHHHHHHHHHHhhhhhhhhhhhCCCCCCceeeccchhhhhhhccHHHHHHHHHhcCCCeEEecchHHHHhccccH
Confidence            3688888888888776652            112 45654  99999999999999999999999999999999999999


Q ss_pred             HHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHH-
Q psy9067          79 LVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRI-  157 (189)
Q Consensus        79 l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-  157 (189)
                      |-.|.+..              ......+|+|..|.|.|.....|..|+..|.  .-|.|+.|+......++|..|++. 
T Consensus       223 l~DH~rRq--------------t~l~~n~fqC~~C~KrFaTeklL~~Hv~rHv--n~ykCplCdmtc~~~ssL~~H~r~r  286 (467)
T KOG3608|consen  223 LFDHLRRQ--------------TELNTNSFQCAQCFKRFATEKLLKSHVVRHV--NCYKCPLCDMTCSSASSLTTHIRYR  286 (467)
T ss_pred             HHHHHHhh--------------hhhcCCchHHHHHHHHHhHHHHHHHHHHHhh--hcccccccccCCCChHHHHHHHHhh
Confidence            99998742              2233446666666666666666666666552  346666666666666666666663 


Q ss_pred             hhCCCcccCccchhccCCchHHHHHHhhh
Q psy9067         158 HTGEKPYACDICHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       158 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  186 (189)
                      |+..+||+|..|++.|.+.++|.+|..+|
T Consensus       287 Hs~dkpfKCd~Cd~~c~~esdL~kH~~~H  315 (467)
T KOG3608|consen  287 HSKDKPFKCDECDTRCVRESDLAKHVQVH  315 (467)
T ss_pred             hccCCCccccchhhhhccHHHHHHHHHhc
Confidence            55566666666666666666666666655

>KOG3576|consensus

Probab=99.75  E-value=2.9e-19  Score=118.36  Aligned_cols=113  Identities=29%  Similarity=0.607  Sum_probs=101.4

Q ss_pred             CCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCcc
Q psy9067          61 VKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH  140 (189)
Q Consensus        61 ~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~  140 (189)
                      ...|.|.+|++.|....-|.+|++                -+...+.+-|..||+.|.+.-+|.+|.++|.|.+||.|..
T Consensus       115 ~d~ftCrvCgK~F~lQRmlnrh~k----------------ch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~  178 (267)
T KOG3576|consen  115 QDSFTCRVCGKKFGLQRMLNRHLK----------------CHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSL  178 (267)
T ss_pred             CCeeeeehhhhhhhHHHHHHHHhh----------------hccHHHHHHHhhccCcccchhhhhhhhccccCccccchhh
Confidence            344999999999999999999998                3666778999999999999999999999999999999999


Q ss_pred             CCccCCChHHHHHHHHHhhC-----------CCcccCccchhccCCchHHHHHHhhhCCC
Q psy9067         141 CTYASPDTFKLKRHLRIHTG-----------EKPYACDICHARFTQSNSLKSHRLIHTPL  189 (189)
Q Consensus       141 C~~~f~~~~~l~~H~~~h~~-----------~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  189 (189)
                      |+++|.+.-.|..|++.-++           .+.|.|..||..-.....+..|+..|||.
T Consensus       179 c~kaftqrcsleshl~kvhgv~~~yaykerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~  238 (267)
T KOG3576|consen  179 CEKAFTQRCSLESHLKKVHGVQHQYAYKERRAKLYVCEDCGYTSERPEVYYLHLKLHHPF  238 (267)
T ss_pred             hhHHHHhhccHHHHHHHHcCchHHHHHHHhhhheeeecccCCCCCChhHHHHHHHhcCCC
Confidence            99999999999999874433           45699999999999999999999999884

>KOG3576|consensus

Probab=99.69  E-value=9e-18  Score=111.36  Aligned_cols=125  Identities=30%  Similarity=0.532  Sum_probs=103.5

Q ss_pred             eEEeeeCCCcceeeechhHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhh
Q psy9067           4 TIYYWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHV   83 (189)
Q Consensus         4 ~~~~~c~~c~~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~   83 (189)
                      ...+.|.+|+ ..|.-..+|.+|++-|..-+.+.|..||+.|.+...|.+|+++|++.+||+|..|++.|..+.+|..|.
T Consensus       115 ~d~ftCrvCg-K~F~lQRmlnrh~kch~~vkr~lct~cgkgfndtfdlkrh~rthtgvrpykc~~c~kaftqrcsleshl  193 (267)
T KOG3576|consen  115 QDSFTCRVCG-KKFGLQRMLNRHLKCHSDVKRHLCTFCGKGFNDTFDLKRHTRTHTGVRPYKCSLCEKAFTQRCSLESHL  193 (267)
T ss_pred             CCeeeeehhh-hhhhHHHHHHHHhhhccHHHHHHHhhccCcccchhhhhhhhccccCccccchhhhhHHHHhhccHHHHH
Confidence            3568899999 799999999999999999899999999999999999999999999999999999999999999999999


Q ss_pred             hhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCC
Q psy9067          84 RYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER  134 (189)
Q Consensus        84 ~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~  134 (189)
                      +..|+....-.   .  -....+-|+|+.||..-.....++.|+..++...
T Consensus       194 ~kvhgv~~~ya---y--kerr~kl~vcedcg~t~~~~e~~~~h~~~~hp~S  239 (267)
T KOG3576|consen  194 KKVHGVQHQYA---Y--KERRAKLYVCEDCGYTSERPEVYYLHLKLHHPFS  239 (267)
T ss_pred             HHHcCchHHHH---H--HHhhhheeeecccCCCCCChhHHHHHHHhcCCCC
Confidence            87666542211   1  1234566888888888887888888877765443

>KOG3623|consensus

Probab=99.58  E-value=5.2e-16  Score=120.17  Aligned_cols=108  Identities=34%  Similarity=0.734  Sum_probs=95.1

Q ss_pred             cccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCC-----------
Q psy9067          64 HKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTG-----------  132 (189)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~-----------  132 (189)
                      ..|+.|++++.....|+.|++..|.              ..+..|.|..|...|.++.-|.+|+..|..           
T Consensus       211 ltcpycdrgykrltslkeHikyrhe--------------kne~nfsC~lCsytFAyRtQLErhm~~hkpg~dqa~sltqs  276 (1007)
T KOG3623|consen  211 LTCPYCDRGYKRLTSLKEHIKYRHE--------------KNEPNFSCMLCSYTFAYRTQLERHMQLHKPGGDQAISLTQS  276 (1007)
T ss_pred             hcchhHHHHHHHHHHHHHHHHHHHh--------------hCCCCCcchhhhhhhhhHHHHHHHHHhhcCCCcccccccch
Confidence            6899999999999999999986322              334568899999999999999999988742           


Q ss_pred             --CCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhh
Q psy9067         133 --ERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI  185 (189)
Q Consensus       133 --~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  185 (189)
                        .+-|.|.+||++|..+-.|+.|+++|+||+||.|+.|++.|+.+-.+..||-.
T Consensus       277 a~lRKFKCtECgKAFKfKHHLKEHlRIHSGEKPfeCpnCkKRFSHSGSySSHmSS  331 (1007)
T KOG3623|consen  277 ALLRKFKCTECGKAFKFKHHLKEHLRIHSGEKPFECPNCKKRFSHSGSYSSHMSS  331 (1007)
T ss_pred             hhhccccccccchhhhhHHHHHhhheeecCCCCcCCcccccccccCCcccccccc
Confidence              35699999999999999999999999999999999999999998888888743

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.39  E-value=3.9e-12  Score=98.58  Aligned_cols=146  Identities=19%  Similarity=0.356  Sum_probs=109.9

Q ss_pred             EeeeCCCcceeeechhHHHHHHhhCCCCCcccCCC--CCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhh
Q psy9067           6 YYWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHV   83 (189)
Q Consensus         6 ~~~c~~c~~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~   83 (189)
                      ...|..|.  .......|..|... .......|+.  |+..|.. ..+         ++.+.|+.|++.|. ...|..|+
T Consensus       407 ~V~C~NC~--~~i~l~~l~lHe~~-C~r~~V~Cp~~~Cg~v~~r-~el---------~~H~~C~~Cgk~f~-~s~LekH~  472 (567)
T PLN03086        407 TVECRNCK--HYIPSRSIALHEAY-CSRHNVVCPHDGCGIVLRV-EEA---------KNHVHCEKCGQAFQ-QGEMEKHM  472 (567)
T ss_pred             eEECCCCC--CccchhHHHHHHhh-CCCcceeCCcccccceeec-ccc---------ccCccCCCCCCccc-hHHHHHHH
Confidence            45688766  34446667777643 4444556874  8888732 222         33358999999996 67799998


Q ss_pred             hhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCC----------hHHHHH
Q psy9067          84 RYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPD----------TFKLKR  153 (189)
Q Consensus        84 ~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~----------~~~l~~  153 (189)
                      ..                .  ..++.|+ ||+.+ ....|..|+..+.+.+++.|+.|+..+..          ...|..
T Consensus       473 ~~----------------~--Hkpv~Cp-Cg~~~-~R~~L~~H~~thCp~Kpi~C~fC~~~v~~g~~~~d~~d~~s~Lt~  532 (567)
T PLN03086        473 KV----------------F--HEPLQCP-CGVVL-EKEQMVQHQASTCPLRLITCRFCGDMVQAGGSAMDVRDRLRGMSE  532 (567)
T ss_pred             Hh----------------c--CCCccCC-CCCCc-chhHHHhhhhccCCCCceeCCCCCCccccCccccchhhhhhhHHH
Confidence            85                2  1578999 99755 67899999999999999999999999852          357889


Q ss_pred             HHHHhhCCCcccCccchhccCCchHHHHHHhhhC
Q psy9067         154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       154 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      |..+ .+.+++.|..||+.+..+- |..|+..-|
T Consensus       533 HE~~-CG~rt~~C~~Cgk~Vrlrd-m~~H~~~~h  564 (567)
T PLN03086        533 HESI-CGSRTAPCDSCGRSVMLKE-MDIHQIAVH  564 (567)
T ss_pred             HHHh-cCCcceEccccCCeeeehh-HHHHHHHhh
Confidence            9888 4899999999999988775 888876544

>KOG3993|consensus

Probab=99.38  E-value=5.9e-14  Score=102.75  Aligned_cols=153  Identities=18%  Similarity=0.276  Sum_probs=110.7

Q ss_pred             cccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhhhhhcCCCchhh---hhh----------hhhc
Q psy9067          35 PHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPEL---VRH----------VRYK  101 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~---~~~----------~~~~  101 (189)
                      .|.|..|...|.+...|.+|.-.-+....|+|+.|+++|+...+|.+|.++ |.......   ...          .+..
T Consensus       267 dyiCqLCK~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRW-HKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  267 DYICQLCKEKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRW-HKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHHHhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcc-cCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            489999999999999999999888888889999999999999999999998 43332211   000          0001


Q ss_pred             -----cCCCCCccCCCCCccccchHHHHhchhhcCCC-------------------------------------------
Q psy9067         102 -----HTHEKPHKCSICDYASVELSKMRNHMRSHTGE-------------------------------------------  133 (189)
Q Consensus       102 -----~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~-------------------------------------------  133 (189)
                           .+.+..|.|..|++.|.....|+.|+.+|...                                           
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a  425 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVA  425 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeee
Confidence                 13445799999999999999999997765321                                           


Q ss_pred             ---CCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         134 ---RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       134 ---~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                         .--.++.++-.+.++..--.+.+....++.|.|.+|...|.++.+|.+|+..-||
T Consensus       426 ~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~~Hp  483 (500)
T KOG3993|consen  426 GSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINKCHP  483 (500)
T ss_pred             ccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhhcCh
Confidence               0023444454444443333333333445679999999999999999999876664

>PHA00733 hypothetical protein

Probab=99.37  E-value=7.3e-13  Score=84.54  Aligned_cols=86  Identities=17%  Similarity=0.357  Sum_probs=71.9

Q ss_pred             cCCCCCccCCCCCccccchHHHHhc--h---hhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCc
Q psy9067         102 HTHEKPHKCSICDYASVELSKMRNH--M---RSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQS  176 (189)
Q Consensus       102 ~~~~~~~~C~~C~~~~~~~~~l~~H--~---~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  176 (189)
                      .+..+++.|.+|++.|.....|..+  +   ....+.+||.|+.|++.|.+...|..|++++  ..+|.|+.|++.|...
T Consensus        35 ~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r~h--~~~~~C~~CgK~F~~~  112 (128)
T PHA00733         35 TPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIRYT--EHSKVCPVCGKEFRNT  112 (128)
T ss_pred             ChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHhcC--CcCccCCCCCCccCCH
Confidence            4567789999999888776665554  1   2234578999999999999999999999976  4579999999999999


Q ss_pred             hHHHHHHhhhCCC
Q psy9067         177 NSLKSHRLIHTPL  189 (189)
Q Consensus       177 ~~l~~H~~~h~~~  189 (189)
                      ..|..|+...|+|
T Consensus       113 ~sL~~H~~~~h~~  125 (128)
T PHA00733        113 DSTLDHVCKKHNI  125 (128)
T ss_pred             HHHHHHHHHhcCc
Confidence            9999999988875

>PHA00733 hypothetical protein

Probab=99.17  E-value=4e-11  Score=76.56  Aligned_cols=64  Identities=23%  Similarity=0.285  Sum_probs=31.6

Q ss_pred             hHHHHHHhhCCCCCcccCCCCCccccchhhHHHH--Hh---hcCCCCCcccccCcccCCChhHHHhhhh
Q psy9067          21 YLLARHLKSHSEERPHKCSVCERGFKTIASLQNH--IN---THTGVKPHKCKYCESRFTTSGELVRHVR   84 (189)
Q Consensus        21 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H--~~---~~~~~~~~~C~~C~~~f~~~~~l~~h~~   84 (189)
                      ..|..+....+.++++.|.+|...|.....|..+  +.   ...+..+|.|+.|++.|.....|..|++
T Consensus        26 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~l~~~~~~~~~kPy~C~~Cgk~Fss~s~L~~H~r   94 (128)
T PHA00733         26 EELKRYHSLTPEQKRLIRAVVKTLIYNPQLLDESSYLYKLLTSKAVSPYVCPLCLMPFSSSVSLKQHIR   94 (128)
T ss_pred             HHhhhhhcCChhhhhHHHHHHhhhccChhhhcchHHHHhhcccCCCCCccCCCCCCcCCCHHHHHHHHh
Confidence            3344444444455666777776666655554444  11   1122344455555555554444444443

>PLN03086 PRLI-interacting factor K; Provisional

Probab=99.13  E-value=2.7e-10  Score=88.62  Aligned_cols=100  Identities=19%  Similarity=0.425  Sum_probs=82.3

Q ss_pred             cccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCC
Q psy9067          35 PHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICD  114 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~  114 (189)
                      .+.|+.|++.|. ...|..|+..++  .++.|+ |+..+ .+..|..|+..                +...+++.|++|+
T Consensus       453 H~~C~~Cgk~f~-~s~LekH~~~~H--kpv~Cp-Cg~~~-~R~~L~~H~~t----------------hCp~Kpi~C~fC~  511 (567)
T PLN03086        453 HVHCEKCGQAFQ-QGEMEKHMKVFH--EPLQCP-CGVVL-EKEQMVQHQAS----------------TCPLRLITCRFCG  511 (567)
T ss_pred             CccCCCCCCccc-hHHHHHHHHhcC--CCccCC-CCCCc-chhHHHhhhhc----------------cCCCCceeCCCCC
Confidence            358999999996 678999999975  889999 99755 67889999873                6778899999999


Q ss_pred             ccccc----------hHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHH
Q psy9067         115 YASVE----------LSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRI  157 (189)
Q Consensus       115 ~~~~~----------~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  157 (189)
                      ..+..          ...|..|.... +.+++.|..|++.+..+ .+..|+..
T Consensus       512 ~~v~~g~~~~d~~d~~s~Lt~HE~~C-G~rt~~C~~Cgk~Vrlr-dm~~H~~~  562 (567)
T PLN03086        512 DMVQAGGSAMDVRDRLRGMSEHESIC-GSRTAPCDSCGRSVMLK-EMDIHQIA  562 (567)
T ss_pred             CccccCccccchhhhhhhHHHHHHhc-CCcceEccccCCeeeeh-hHHHHHHH
Confidence            99852          35788998886 88999999999999887 55666543

>PHA02768 hypothetical protein; Provisional

Probab=99.11  E-value=4.1e-11  Score=63.54  Aligned_cols=42  Identities=19%  Similarity=0.333  Sum_probs=29.2

Q ss_pred             ccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHH
Q psy9067         136 YQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSL  179 (189)
Q Consensus       136 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  179 (189)
                      |.|+.||+.|...+.|..|+++|+  ++++|..|++.|...+.|
T Consensus         6 y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l   47 (55)
T PHA02768          6 YECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEY   47 (55)
T ss_pred             cCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceeccccee
Confidence            567777777777777777777766  567777777777665554

>PHA02768 hypothetical protein; Provisional

Probab=98.93  E-value=4.3e-10  Score=59.68  Aligned_cols=44  Identities=23%  Similarity=0.384  Sum_probs=39.9

Q ss_pred             CccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHH
Q psy9067         107 PHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLK  152 (189)
Q Consensus       107 ~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~  152 (189)
                      .|.|+.||+.|...+.|..|+++|.  +++.|..|++.|...+.|.
T Consensus         5 ~y~C~~CGK~Fs~~~~L~~H~r~H~--k~~kc~~C~k~f~~~s~l~   48 (55)
T PHA02768          5 GYECPICGEIYIKRKSMITHLRKHN--TNLKLSNCKRISLRTGEYI   48 (55)
T ss_pred             ccCcchhCCeeccHHHHHHHHHhcC--CcccCCcccceecccceeE
Confidence            4899999999999999999999997  7999999999999876653

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.82  E-value=2.3e-09  Score=48.73  Aligned_cols=26  Identities=54%  Similarity=1.163  Sum_probs=20.7

Q ss_pred             HHHHHHHHhhCCCcccCccchhccCC
Q psy9067         150 KLKRHLRIHTGEKPYACDICHARFTQ  175 (189)
Q Consensus       150 ~l~~H~~~h~~~~~~~C~~C~~~f~~  175 (189)
                      .|..|+++|++++||.|+.|+++|.+
T Consensus         1 ~l~~H~~~H~~~k~~~C~~C~k~F~~   26 (26)
T PF13465_consen    1 NLRRHMRTHTGEKPYKCPYCGKSFSN   26 (26)
T ss_dssp             HHHHHHHHHSSSSSEEESSSSEEESS
T ss_pred             CHHHHhhhcCCCCCCCCCCCcCeeCc
Confidence            36778888888888888888888763

...

>KOG3993|consensus

Probab=98.67  E-value=3e-09  Score=78.55  Aligned_cols=151  Identities=17%  Similarity=0.233  Sum_probs=108.3

Q ss_pred             EeeeCCCcceeeechhHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcC--------------------------
Q psy9067           6 YYWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHT--------------------------   59 (189)
Q Consensus         6 ~~~c~~c~~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~--------------------------   59 (189)
                      .|-|..|- ..|.+-..|++|.-.-.--..|.|+.|++.|....+|..|.+=|-                          
T Consensus       267 dyiCqLCK-~kYeD~F~LAQHrC~RIV~vEYrCPEC~KVFsCPANLASHRRWHKPR~eaa~a~~~P~k~~~~~rae~~ea  345 (500)
T KOG3993|consen  267 DYICQLCK-EKYEDAFALAQHRCPRIVHVEYRCPECDKVFSCPANLASHRRWHKPRPEAAKAGSPPPKQAVETRAEVQEA  345 (500)
T ss_pred             HHHHHHHH-HhhhhHHHHhhccCCeeEEeeecCCcccccccCchhhhhhhcccCCchhhhhcCCCChhhhhhhhhhhhhc
Confidence            37788898 599999999999776665667999999999999999999976442                          


Q ss_pred             -------CCCCcccccCcccCCChhHHHhhhhhhcCCCchhh--------------------hhhhhh--ccC-------
Q psy9067          60 -------GVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPEL--------------------VRHVRY--KHT-------  103 (189)
Q Consensus        60 -------~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~--------------------~~~~~~--~~~-------  103 (189)
                             .+..|.|..|++.|....-|+.|+..|+.......                    ..+...  .+.       
T Consensus       346 ~rsg~dss~gi~~C~~C~KkFrRqAYLrKHqlthq~~~~~k~~a~~f~~s~~~~l~~~~~~~a~h~~a~~~~g~~vl~~a  425 (500)
T KOG3993|consen  346 ERSGDDSSSGIFSCHTCGKKFRRQAYLRKHQLTHQRAPLAKEKAPKFLLSRVIPLMHFNQAVATHSSASDSHGDEVLYVA  425 (500)
T ss_pred             cccCCcccCceeecHHhhhhhHHHHHHHHhHHhhhccccchhcccCcchhhcccccccccccccccccccccccceeeee
Confidence                   01238999999999999999999887765543310                    000000  000       


Q ss_pred             -CCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHH
Q psy9067         104 -HEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRI  157 (189)
Q Consensus       104 -~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~  157 (189)
                       ...--.++.+|..+.+...--.+.+....+..|.|.+|--.|.+...|.+|+..
T Consensus       426 ~sael~~pp~~~~ppsss~~sgg~~rlg~~~q~f~~ky~~atfyss~~ltrhin~  480 (500)
T KOG3993|consen  426 GSAELELPPYDGSPPSSSGSSGGYGRLGIAEQGFTCKYCPATFYSSPGLTRHINK  480 (500)
T ss_pred             ccccccCCCCCCCCcccCCCCCccccccchhhccccccchHhhhcCcchHhHhhh
Confidence             011124667776666665555555555666789999999999999999999764

>PHA00616 hypothetical protein

Probab=98.58  E-value=2.7e-08  Score=50.32  Aligned_cols=34  Identities=18%  Similarity=0.248  Sum_probs=22.1

Q ss_pred             CccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      ||+|+.||+.|...+.|..|++.|++++++.|+.
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            4666666666666666666666666666666543

>PHA00732 hypothetical protein

Probab=98.57  E-value=5.4e-08  Score=56.59  Aligned_cols=46  Identities=30%  Similarity=0.659  Sum_probs=27.2

Q ss_pred             CccCCCCCccccchHHHHhchhh-cCCCCCccCccCCccCCChHHHHHHHHHh
Q psy9067         107 PHKCSICDYASVELSKMRNHMRS-HTGERPYQCAHCTYASPDTFKLKRHLRIH  158 (189)
Q Consensus       107 ~~~C~~C~~~~~~~~~l~~H~~~-~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  158 (189)
                      +|.|+.||+.|.....|..|++. |.   ++.|++|++.|.+   +..|.++.
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~~---l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYRR---LNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeCC---hhhhhccc
Confidence            35666777777777777766653 32   2466666666663   44455443

>PF13465 zf-H2C2_2: Zinc-finger double domain; PDB: 2EN7_A 1TF6_A 1TF3_A 2ELT_A 2EOS_A 2EN2_A 2DMD_A 2WBS_A 2WBU_A 2EM5_A

Probab=98.56  E-value=3e-08  Score=45.00  Aligned_cols=24  Identities=42%  Similarity=1.032  Sum_probs=14.8

Q ss_pred             HHHHHhhCCCCCcccCCCCCcccc
Q psy9067          23 LARHLKSHSEERPHKCSVCERGFK   46 (189)
Q Consensus        23 l~~h~~~~~~~~~~~C~~C~~~f~   46 (189)
                      |..|+++|.+++||.|+.|++.|.
T Consensus         2 l~~H~~~H~~~k~~~C~~C~k~F~   25 (26)
T PF13465_consen    2 LRRHMRTHTGEKPYKCPYCGKSFS   25 (26)
T ss_dssp             HHHHHHHHSSSSSEEESSSSEEES
T ss_pred             HHHHhhhcCCCCCCCCCCCcCeeC
Confidence            556666666666666666666553

...

>PHA00616 hypothetical protein

Probab=98.45  E-value=1e-07  Score=48.23  Aligned_cols=34  Identities=15%  Similarity=0.257  Sum_probs=30.5

Q ss_pred             cccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          35 PHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      ||+|+.||+.|..++.|..|++.+++++++.|..
T Consensus         1 pYqC~~CG~~F~~~s~l~~H~r~~hg~~~~~~~~   34 (44)
T PHA00616          1 MYQCLRCGGIFRKKKEVIEHLLSVHKQNKLTLEY   34 (44)
T ss_pred             CCccchhhHHHhhHHHHHHHHHHhcCCCccceeE
Confidence            5889999999999999999999999999988764

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.42  E-value=7.5e-07  Score=48.14  Aligned_cols=51  Identities=25%  Similarity=0.442  Sum_probs=33.1

Q ss_pred             CccCccCCccCCChHHHHHHHHH-hhC-CCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLRI-HTG-EKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~~-h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .|.||.|++ ......|..|... |.. .+.+.|++|...+.  .+|..|+..+|+
T Consensus         2 ~f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H~   54 (54)
T PF05605_consen    2 SFTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQHR   54 (54)
T ss_pred             CcCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhcC
Confidence            367777777 4455677777554 333 24577888877544  378888877764

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=98.35  E-value=1.9e-07  Score=41.11  Aligned_cols=23  Identities=39%  Similarity=0.797  Sum_probs=18.4

Q ss_pred             ccCccchhccCCchHHHHHHhhh
Q psy9067         164 YACDICHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~~h  186 (189)
                      |.|+.|++.|++.++|..|++.|
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~H   23 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRRH   23 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhHC
Confidence            57888888888888888888764

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=98.29  E-value=3.1e-07  Score=42.14  Aligned_cols=27  Identities=33%  Similarity=0.812  Sum_probs=22.8

Q ss_pred             cccCccchhccCCchHHHHHHhhhCCC
Q psy9067         163 PYACDICHARFTQSNSLKSHRLIHTPL  189 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~~h~~~  189 (189)
                      +|.|..|++.|.+...|..|++.|+++
T Consensus         1 ~~~C~~C~~~F~~~~~l~~H~~~h~~~   27 (27)
T PF13912_consen    1 PFECDECGKTFSSLSALREHKRSHCSL   27 (27)
T ss_dssp             SEEETTTTEEESSHHHHHHHHCTTTT-
T ss_pred             CCCCCccCCccCChhHHHHHhHHhcCC
Confidence            578999999999999999999888764

>PHA00732 hypothetical protein

Probab=98.22  E-value=1.2e-06  Score=51.03  Aligned_cols=46  Identities=28%  Similarity=0.670  Sum_probs=39.5

Q ss_pred             CccCccCCccCCChHHHHHHHHH-hhCCCcccCccchhccCCchHHHHHHhhh
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLRI-HTGEKPYACDICHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~~-h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  186 (189)
                      ||.|.+|++.|.+...|..|++. |.   ++.|+.||+.|.   .|..|.+++
T Consensus         1 py~C~~Cgk~F~s~s~Lk~H~r~~H~---~~~C~~CgKsF~---~l~~H~~~~   47 (79)
T PHA00732          1 MFKCPICGFTTVTLFALKQHARRNHT---LTKCPVCNKSYR---RLNQHFYSQ   47 (79)
T ss_pred             CccCCCCCCccCCHHHHHHHhhcccC---CCccCCCCCEeC---Chhhhhccc
Confidence            68999999999999999999985 54   468999999998   478887665

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=98.22  E-value=8e-07  Score=39.41  Aligned_cols=24  Identities=29%  Similarity=0.715  Sum_probs=18.1

Q ss_pred             ccCccchhccCCchHHHHHHhhhC
Q psy9067         164 YACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      |.|++|++.|.+...|..|+++||
T Consensus         1 ~~C~~C~~~~~~~~~l~~H~~~~H   24 (24)
T PF13894_consen    1 FQCPICGKSFRSKSELRQHMRTHH   24 (24)
T ss_dssp             EE-SSTS-EESSHHHHHHHHHHHS
T ss_pred             CCCcCCCCcCCcHHHHHHHHHhhC
Confidence            578888888888888888888775

...

>PF05605 zf-Di19: Drought induced 19 protein (Di19), zinc-binding; InterPro: IPR008598 This entry consists of several drought induced 19 (Di19) like and RING finger 114 proteins

Probab=98.10  E-value=6.1e-06  Score=44.55  Aligned_cols=49  Identities=31%  Similarity=0.556  Sum_probs=31.4

Q ss_pred             ccCCCCCccccchhhHHHHHhhcCCC--CCcccccCcccCCChhHHHhhhhhhc
Q psy9067          36 HKCSVCERGFKTIASLQNHINTHTGV--KPHKCKYCESRFTTSGELVRHVRYKH   87 (189)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~~~~--~~~~C~~C~~~f~~~~~l~~h~~~~h   87 (189)
                      |.||.|++ ..+...|..|....+..  +.+.|++|...+.  .+|..|+..+|
T Consensus         3 f~CP~C~~-~~~~~~L~~H~~~~H~~~~~~v~CPiC~~~~~--~~l~~Hl~~~H   53 (54)
T PF05605_consen    3 FTCPYCGK-GFSESSLVEHCEDEHRSESKNVVCPICSSRVT--DNLIRHLNSQH   53 (54)
T ss_pred             cCCCCCCC-ccCHHHHHHHHHhHCcCCCCCccCCCchhhhh--hHHHHHHHHhc
Confidence            67777877 44556777776664432  3577888876543  37777776543

Di19 has been found to be strongly expressed in both the roots and leaves of Arabidopsis thaliana during progressive drought [], whilst RING finger proteins are thought to play a role in spermatogenesis. The precise function is unknown.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=98.03  E-value=3.1e-06  Score=51.93  Aligned_cols=73  Identities=21%  Similarity=0.362  Sum_probs=20.9

Q ss_pred             cCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhh
Q psy9067         109 KCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       109 ~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  186 (189)
                      +|..|+..|.+...|..|+...++...-    ....+.....+..+.+.- -...+.|.+|++.|.+...|..||+.+
T Consensus         1 ~C~~C~~~f~~~~~l~~H~~~~H~~~~~----~~~~l~~~~~~~~~~~~~-~~~~~~C~~C~~~f~s~~~l~~Hm~~~   73 (100)
T PF12756_consen    1 QCLFCDESFSSVDDLLQHMKKKHGFDIP----DQKYLVDPNRLLNYLRKK-VKESFRCPYCNKTFRSREALQEHMRSK   73 (100)
T ss_dssp             -----------------------------------------------------SSEEBSSSS-EESSHHHHHHHHHHT
T ss_pred             Cccccccccccccccccccccccccccc----cccccccccccccccccc-cCCCCCCCccCCCCcCHHHHHHHHcCc
Confidence            5889999999999999998766554221    111111223333333221 123689999999999999999999865

>PF00096 zf-C2H2: Zinc finger, C2H2 type; InterPro: IPR007087 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.89  E-value=7.2e-06  Score=35.93  Aligned_cols=22  Identities=36%  Similarity=0.720  Sum_probs=13.0

Q ss_pred             ccCccCCccCCChHHHHHHHHH
Q psy9067         136 YQCAHCTYASPDTFKLKRHLRI  157 (189)
Q Consensus       136 ~~C~~C~~~f~~~~~l~~H~~~  157 (189)
                      |.|++|++.|.....|..|++.
T Consensus         1 y~C~~C~~~f~~~~~l~~H~~~   22 (23)
T PF00096_consen    1 YKCPICGKSFSSKSNLKRHMRR   22 (23)
T ss_dssp             EEETTTTEEESSHHHHHHHHHH
T ss_pred             CCCCCCCCccCCHHHHHHHHhH
Confidence            3556666666666666666554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger: #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C], where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter []. This entry represents the classical C2H2 zinc finger domain. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0008270 zinc ion binding, 0005622 intracellular; PDB: 2D9H_A 2EPC_A 1SP1_A 1VA3_A 2WBT_B 2ELR_A 2YTP_A 2YTT_A 1VA1_A 2ELO_A ....

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=97.77  E-value=1.1e-05  Score=35.72  Aligned_cols=24  Identities=33%  Similarity=0.635  Sum_probs=19.1

Q ss_pred             ccCccchhccCCchHHHHHHhhhCC
Q psy9067         164 YACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |+|+.|+...+ .++|..|++.+||
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~H~   24 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRHHP   24 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHHHS
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhhCc
Confidence            68999998888 8899999998876

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.74  E-value=9.2e-06  Score=58.48  Aligned_cols=52  Identities=35%  Similarity=0.748  Sum_probs=43.6

Q ss_pred             CCCccCcc--CCccCCChHHHHHHHHHhh-------------------CCCcccCccchhccCCchHHHHHHh
Q psy9067         133 ERPYQCAH--CTYASPDTFKLKRHLRIHT-------------------GEKPYACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       133 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~-------------------~~~~~~C~~C~~~f~~~~~l~~H~~  184 (189)
                      ++||.|++  |.+.+.....|+-|+.-.+                   ..+||+|++|++.+.+..+|+-|+.
T Consensus       347 ~KpykCpV~gC~K~YknqnGLKYH~lhGH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr~  419 (423)
T COG5189         347 GKPYKCPVEGCNKKYKNQNGLKYHMLHGHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHRK  419 (423)
T ss_pred             CceecCCCCCchhhhccccchhhhhhccccCcccCCCCCccccccccccCCceeccccchhhccCccceeccc
Confidence            48999986  8899999999999875322                   2479999999999999999999954

>smart00355 ZnF_C2H2 zinc finger

Probab=97.63  E-value=4.6e-05  Score=34.12  Aligned_cols=24  Identities=33%  Similarity=0.607  Sum_probs=16.9

Q ss_pred             ccCccchhccCCchHHHHHHhhhC
Q psy9067         164 YACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      |.|+.|++.|...+.|..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            467777777777777777776553

>PF13894 zf-C2H2_4: C2H2-type zinc finger; PDB: 2ELX_A 2EPP_A 2DLK_A 1X6H_A 2EOU_A 2EMB_A 2GQJ_A 2CSH_A 2WBT_B 2ELM_A

Probab=97.59  E-value=5.4e-05  Score=33.26  Aligned_cols=21  Identities=29%  Similarity=0.923  Sum_probs=10.0

Q ss_pred             cCCCCCccccchhhHHHHHhh
Q psy9067          37 KCSVCERGFKTIASLQNHINT   57 (189)
Q Consensus        37 ~C~~C~~~f~~~~~l~~H~~~   57 (189)
                      .|+.|+..|.+...|..|+..
T Consensus         2 ~C~~C~~~~~~~~~l~~H~~~   22 (24)
T PF13894_consen    2 QCPICGKSFRSKSELRQHMRT   22 (24)
T ss_dssp             E-SSTS-EESSHHHHHHHHHH
T ss_pred             CCcCCCCcCCcHHHHHHHHHh
Confidence            455555555555555555544

...

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=97.59  E-value=5.3e-05  Score=39.24  Aligned_cols=29  Identities=38%  Similarity=0.595  Sum_probs=14.7

Q ss_pred             CCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         160 GEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       160 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .+.|-.|++|+..+....+|.+|+.+.|+
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~   49 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHF   49 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTT
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhc
Confidence            34556666666666666666666665554

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>PF12756 zf-C2H2_2: C2H2 type zinc-finger (2 copies); PDB: 2DMI_A

Probab=97.54  E-value=4.6e-05  Score=46.63  Aligned_cols=22  Identities=27%  Similarity=0.628  Sum_probs=11.2

Q ss_pred             ccCCCCCccccchHHHHhchhh
Q psy9067         108 HKCSICDYASVELSKMRNHMRS  129 (189)
Q Consensus       108 ~~C~~C~~~~~~~~~l~~H~~~  129 (189)
                      +.|..|++.|.+...|..|++.
T Consensus        51 ~~C~~C~~~f~s~~~l~~Hm~~   72 (100)
T PF12756_consen   51 FRCPYCNKTFRSREALQEHMRS   72 (100)
T ss_dssp             EEBSSSS-EESSHHHHHHHHHH
T ss_pred             CCCCccCCCCcCHHHHHHHHcC
Confidence            4555555555555555555543

>PF13912 zf-C2H2_6: C2H2-type zinc finger; PDB: 1JN7_A 1FU9_A 2L1O_A 1NJQ_A 2EN8_A 2EMM_A 1FV5_A 1Y0J_B 2L6Z_B

Probab=97.48  E-value=7.4e-05  Score=34.02  Aligned_cols=23  Identities=26%  Similarity=0.800  Sum_probs=12.0

Q ss_pred             ccCCCCCccccchhhHHHHHhhc
Q psy9067          36 HKCSVCERGFKTIASLQNHINTH   58 (189)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~   58 (189)
                      |.|..|++.|.+...|..|++.+
T Consensus         2 ~~C~~C~~~F~~~~~l~~H~~~h   24 (27)
T PF13912_consen    2 FECDECGKTFSSLSALREHKRSH   24 (27)
T ss_dssp             EEETTTTEEESSHHHHHHHHCTT
T ss_pred             CCCCccCCccCChhHHHHHhHHh
Confidence            45555555555555555555443

>COG5189 SFP1 Putative transcriptional repressor regulating G2/M transition [Transcription / Cell division and chromosome partitioning]

Probab=97.37  E-value=6.6e-05  Score=54.21  Aligned_cols=66  Identities=24%  Similarity=0.533  Sum_probs=37.9

Q ss_pred             CCCCccccc--CcccCCChhHHHhhhhhhcCCCchhhhhh-----hhhccCCCCCccCCCCCccccchHHHHhch
Q psy9067          60 GVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPELVRH-----VRYKHTHEKPHKCSICDYASVELSKMRNHM  127 (189)
Q Consensus        60 ~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~~~~-----~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~  127 (189)
                      +++||+|++  |++.+....-|+-|+..  +.+.+.+...     ...-....+||+|++|+|.|++...|.-|+
T Consensus       346 d~KpykCpV~gC~K~YknqnGLKYH~lh--GH~~~~~~~~p~p~~~~~F~~~~KPYrCevC~KRYKNlNGLKYHr  418 (423)
T COG5189         346 DGKPYKCPVEGCNKKYKNQNGLKYHMLH--GHQNQKLHENPSPEKMNIFSAKDKPYRCEVCDKRYKNLNGLKYHR  418 (423)
T ss_pred             cCceecCCCCCchhhhccccchhhhhhc--cccCcccCCCCCccccccccccCCceeccccchhhccCccceecc
Confidence            358899986  89999998889999874  3332211100     000123345566666666655555555443

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=97.18  E-value=0.00017  Score=32.08  Aligned_cols=23  Identities=39%  Similarity=0.831  Sum_probs=16.9

Q ss_pred             ccCccchhccCCchHHHHHHhhh
Q psy9067         164 YACDICHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~~h  186 (189)
                      |.|.+|++.|++...|..|++.+
T Consensus         1 ~~C~~C~~~f~s~~~~~~H~~s~   23 (25)
T PF12874_consen    1 FYCDICNKSFSSENSLRQHLRSK   23 (25)
T ss_dssp             EEETTTTEEESSHHHHHHHHTTH
T ss_pred             CCCCCCCCCcCCHHHHHHHHCcC
Confidence            46777777777777777777654

>PF09237 GAGA: GAGA factor; InterPro: IPR015318 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=96.98  E-value=0.00061  Score=35.40  Aligned_cols=31  Identities=32%  Similarity=0.553  Sum_probs=14.7

Q ss_pred             CCCCccCccCCccCCChHHHHHHHHHhhCCC
Q psy9067         132 GERPYQCAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       132 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      .+.|-.|++|+..+.+.-.|..|+++.++.+
T Consensus        21 S~~PatCP~C~a~~~~srnLrRHle~~H~~k   51 (54)
T PF09237_consen   21 SEQPATCPICGAVIRQSRNLRRHLEIRHFKK   51 (54)
T ss_dssp             TS--EE-TTT--EESSHHHHHHHHHHHTTTS
T ss_pred             cCCCCCCCcchhhccchhhHHHHHHHHhccc
Confidence            3455566666666666666666665555444

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. Members of this entry bind to a 5'-GAGAG-3' DNA consensus binding site, and contain a Cys2-His2 zinc finger core as well as an N-terminal extension containing two highly basic regions. The zinc finger core binds in the DNA major groove and recognises the first three GAG bases of the consensus in a manner similar to that seen in other classical zinc finger-DNA complexes. The second basic region forms a helix that interacts in the major groove recognising the last G of the consensus, while the first basic region wraps around the DNA in the minor groove and recognises the A in the fourth position of the consensus sequence []. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; PDB: 1YUI_A 1YUJ_A.

>smart00355 ZnF_C2H2 zinc finger

Probab=96.97  E-value=0.00089  Score=29.67  Aligned_cols=24  Identities=33%  Similarity=0.650  Sum_probs=18.3

Q ss_pred             ccCccCCccCCChHHHHHHHHHhh
Q psy9067         136 YQCAHCTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       136 ~~C~~C~~~f~~~~~l~~H~~~h~  159 (189)
                      |.|+.|++.|.....+..|++.|.
T Consensus         1 ~~C~~C~~~f~~~~~l~~H~~~H~   24 (26)
T smart00355        1 YRCPECGKVFKSKSALKEHMRTHX   24 (26)
T ss_pred             CCCCCCcchhCCHHHHHHHHHHhc
Confidence            467888888888888888877653

>PRK04860 hypothetical protein; Provisional

Probab=96.85  E-value=0.0007  Score=45.05  Aligned_cols=39  Identities=31%  Similarity=0.746  Sum_probs=31.8

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCc
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQS  176 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~  176 (189)
                      -+|.|. |+.   ....+..|.+++.++++|.|..|+..|...
T Consensus       118 ~~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        118 FPYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            368897 887   556778899999999999999999887653

>PF12874 zf-met: Zinc-finger of C2H2 type; PDB: 1ZU1_A 2KVG_A

Probab=96.66  E-value=0.001  Score=29.48  Aligned_cols=20  Identities=30%  Similarity=0.860  Sum_probs=9.4

Q ss_pred             cCCCCCccccchhhHHHHHh
Q psy9067          37 KCSVCERGFKTIASLQNHIN   56 (189)
Q Consensus        37 ~C~~C~~~f~~~~~l~~H~~   56 (189)
                      .|.+|+..|.+...+..|++
T Consensus         2 ~C~~C~~~f~s~~~~~~H~~   21 (25)
T PF12874_consen    2 YCDICNKSFSSENSLRQHLR   21 (25)
T ss_dssp             EETTTTEEESSHHHHHHHHT
T ss_pred             CCCCCCCCcCCHHHHHHHHC
Confidence            34444444444444444443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=96.63  E-value=0.00041  Score=31.52  Aligned_cols=22  Identities=36%  Similarity=0.738  Sum_probs=15.4

Q ss_pred             ccCccchhccCCchHHHHHHhh
Q psy9067         164 YACDICHARFTQSNSLKSHRLI  185 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~~  185 (189)
                      |.|.+|++.|.+...|..|+++
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>PRK04860 hypothetical protein; Provisional

Probab=96.09  E-value=0.0031  Score=42.00  Aligned_cols=38  Identities=18%  Similarity=0.547  Sum_probs=32.9

Q ss_pred             cccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCCh
Q psy9067          35 PHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTS   76 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~   76 (189)
                      +|.|. |+.   ....+..|.+.+.++++|.|..|+..|...
T Consensus       119 ~Y~C~-C~~---~~~~~rrH~ri~~g~~~YrC~~C~~~l~~~  156 (160)
T PRK04860        119 PYRCK-CQE---HQLTVRRHNRVVRGEAVYRCRRCGETLVFK  156 (160)
T ss_pred             EEEcC-CCC---eeCHHHHHHHHhcCCccEECCCCCceeEEe
Confidence            58998 987   668889999999999999999999987654

>KOG1146|consensus

Probab=96.09  E-value=0.0032  Score=54.02  Aligned_cols=85  Identities=27%  Similarity=0.580  Sum_probs=67.2

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhhcC-------------------------CCCCccCccCCccCCChHHHHHHH
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRSHT-------------------------GERPYQCAHCTYASPDTFKLKRHL  155 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~-------------------------~~~~~~C~~C~~~f~~~~~l~~H~  155 (189)
                      .+...+.+.|+.|+..|++...|-.|++.-+                         +.++|.|..|..++.....|.+|+
T Consensus       459 L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C~~C~~stttng~Lsihl  538 (1406)
T KOG1146|consen  459 LHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPCRACNYSTTTNGNLSIHL  538 (1406)
T ss_pred             eecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccceeeeeeeecchHHHHHH
Confidence            4566688999999999999999999988721                         226799999999999999999998


Q ss_pred             HH--hh----------C-------------------------------CCcccCccchhccCCchHHHHHHhh
Q psy9067         156 RI--HT----------G-------------------------------EKPYACDICHARFTQSNSLKSHRLI  185 (189)
Q Consensus       156 ~~--h~----------~-------------------------------~~~~~C~~C~~~f~~~~~l~~H~~~  185 (189)
                      ..  |-          +                               +-++.|.+|++.-+-..+|..||..
T Consensus       539 qS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetniarnlrihmts  611 (1406)
T KOG1146|consen  539 QSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNIARNLRIHMTA  611 (1406)
T ss_pred             HHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhhhhcccccccc
Confidence            63  21          0                               1147899999888888888888753

>PF13909 zf-H2C2_5: C2H2-type zinc-finger domain; PDB: 1X5W_A

Probab=96.07  E-value=0.0039  Score=27.29  Aligned_cols=22  Identities=27%  Similarity=0.609  Sum_probs=10.4

Q ss_pred             ccCCCCCccccchhhHHHHHhhc
Q psy9067          36 HKCSVCERGFKTIASLQNHINTH   58 (189)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~   58 (189)
                      |.|+.|+.... ...|..|+..+
T Consensus         1 y~C~~C~y~t~-~~~l~~H~~~~   22 (24)
T PF13909_consen    1 YKCPHCSYSTS-KSNLKRHLKRH   22 (24)
T ss_dssp             EE-SSSS-EES-HHHHHHHHHHH
T ss_pred             CCCCCCCCcCC-HHHHHHHHHhh
Confidence            34555555554 55555555543

>KOG1146|consensus

Probab=96.01  E-value=0.0011  Score=56.65  Aligned_cols=145  Identities=19%  Similarity=0.347  Sum_probs=88.1

Q ss_pred             CCccccchhhHHHHHhh-cCCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhh---------hhhhhccCCCCCccC
Q psy9067          41 CERGFKTIASLQNHINT-HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELV---------RHVRYKHTHEKPHKC  110 (189)
Q Consensus        41 C~~~f~~~~~l~~H~~~-~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~---------~~~~~~~~~~~~~~C  110 (189)
                      |+..+.....+..|+.. +...+.+.|+.|+..|.....|-.|++..|........         ..........++|.|
T Consensus       442 ~e~~~~s~r~~~~~t~~L~S~~kt~~cpkc~~~yk~a~~L~vhmRskhp~~~~~~c~~gq~~~~~arg~~~~~~~~p~~C  521 (1406)
T KOG1146|consen  442 AEPLLESKRSLEGQTVVLHSFFKTLKCPKCNWHYKLAQTLGVHMRSKHPESQSAYCKAGQNHPRLARGEVYRCPGKPYPC  521 (1406)
T ss_pred             hhhhhhhhcccccceeeeecccccccCCccchhhhhHHHhhhcccccccccchhHhHhccccccccccccccCCCCcccc
Confidence            33333333333333332 23345677777777777777777777764433322111         111112345677999


Q ss_pred             CCCCccccchHHHHhchhhcC------------C-------------------------------CCCccCccCCccCCC
Q psy9067         111 SICDYASVELSKMRNHMRSHT------------G-------------------------------ERPYQCAHCTYASPD  147 (189)
Q Consensus       111 ~~C~~~~~~~~~l~~H~~~~~------------~-------------------------------~~~~~C~~C~~~f~~  147 (189)
                      ..|...+....+|.+|++...            +                               .-.+.|.+|+....-
T Consensus       522 ~~C~~stttng~LsihlqS~~h~~~lee~~~~~g~~v~~~~~~v~s~~P~~ag~~~~ags~~pktkP~~~C~vc~yetni  601 (1406)
T KOG1146|consen  522 RACNYSTTTNGNLSIHLQSDLHRNELEEAEENAGEQVRLLPASVTSAVPEEAGLGPSAGSSGPKTKPSWRCEVCSYETNI  601 (1406)
T ss_pred             eeeeeeeecchHHHHHHHHHhhHHHHHHHHhccccchhhhhhhhcccCcccccCCCCCCCCCCCCCCCcchhhhcchhhh
Confidence            999999999999999976421            0                               023899999999888


Q ss_pred             hHHHHHHHHHhhCCC-cccCccchhccCCchHHHHHHhh
Q psy9067         148 TFKLKRHLRIHTGEK-PYACDICHARFTQSNSLKSHRLI  185 (189)
Q Consensus       148 ~~~l~~H~~~h~~~~-~~~C~~C~~~f~~~~~l~~H~~~  185 (189)
                      .-.|..|+..-.... |-.+-.++..+.....+..+.+.
T Consensus       602 arnlrihmtss~~s~~p~~~Lq~~it~~l~~~~~~~~~l  640 (1406)
T KOG1146|consen  602 ARNLRIHMTASPSSSPPSLVLQQNITSSLASLLGGQGRL  640 (1406)
T ss_pred             hhccccccccCCCCCChHHHhhhcchhhccccccCcCCC
Confidence            888888987533333 35666666666555555544443

>PF12171 zf-C2H2_jaz: Zinc-finger double-stranded RNA-binding; InterPro: IPR022755 This zinc finger is found in archaea and eukaryotes, and is approximately 30 amino acids in length

Probab=95.92  E-value=0.0077  Score=27.21  Aligned_cols=22  Identities=27%  Similarity=0.581  Sum_probs=15.6

Q ss_pred             ccCCCCCccccchHHHHhchhh
Q psy9067         108 HKCSICDYASVELSKMRNHMRS  129 (189)
Q Consensus       108 ~~C~~C~~~~~~~~~l~~H~~~  129 (189)
                      |.|..|++.|.+...+..|+.+
T Consensus         2 ~~C~~C~k~f~~~~~~~~H~~s   23 (27)
T PF12171_consen    2 FYCDACDKYFSSENQLKQHMKS   23 (27)
T ss_dssp             CBBTTTTBBBSSHHHHHCCTTS
T ss_pred             CCcccCCCCcCCHHHHHHHHcc
Confidence            5677777777777777777654

The mammalian members of this group occur multiple times along the protein, joined by flexible linkers, and are referred to as JAZ - dsRNA-binding ZF protein - zinc-fingers. The JAZ proteins are expressed in all tissues tested and localise in the nucleus, particularly the nucleolus []. JAZ preferentially binds to double-stranded (ds) RNA or RNA/DNA hybrids rather than DNA. In addition to binding double-stranded RNA, these zinc-fingers are required for nucleolar localisation. This entry represents the multiple-adjacent-C2H2 zinc finger, JAZ. ; PDB: 4DGW_A 1ZR9_A.

>KOG2785|consensus

Probab=95.72  E-value=0.026  Score=42.29  Aligned_cols=52  Identities=19%  Similarity=0.374  Sum_probs=42.9

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCC-----------------------CcccCccch---hccCCchHHHHHHhh
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGE-----------------------KPYACDICH---ARFTQSNSLKSHRLI  185 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~  185 (189)
                      .|-.|-.|+..+.+...-..|+..+++-                       .-+.|-.|+   +.|.+.....+||..
T Consensus       165 ~Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  165 IPTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CCcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            4678999999999999999999887662                       247888898   888888888999864

>PF13913 zf-C2HC_2: zinc-finger of a C2HC-type

Probab=95.71  E-value=0.0085  Score=26.60  Aligned_cols=20  Identities=30%  Similarity=0.765  Sum_probs=11.2

Q ss_pred             ccCccchhccCCchHHHHHHh
Q psy9067         164 YACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~  184 (189)
                      ..|+.||+.| ....|.+|+.
T Consensus         3 ~~C~~CgR~F-~~~~l~~H~~   22 (25)
T PF13913_consen    3 VPCPICGRKF-NPDRLEKHEK   22 (25)
T ss_pred             CcCCCCCCEE-CHHHHHHHHH
Confidence            3566666666 3334666654

>TIGR00622 ssl1 transcription factor ssl1

Probab=95.71  E-value=0.033  Score=34.51  Aligned_cols=20  Identities=20%  Similarity=0.472  Sum_probs=10.2

Q ss_pred             CcccCCCCCccccchhhHHH
Q psy9067          34 RPHKCSVCERGFKTIASLQN   53 (189)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~   53 (189)
                      -|..|+.|+-+.-...+|.+
T Consensus        14 LP~~CpiCgLtLVss~HLAR   33 (112)
T TIGR00622        14 LPVECPICGLTLILSTHLAR   33 (112)
T ss_pred             CCCcCCcCCCEEeccchHHH
Confidence            34456666555544444444

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>KOG2893|consensus

Probab=95.58  E-value=0.0032  Score=43.92  Aligned_cols=50  Identities=20%  Similarity=0.450  Sum_probs=39.1

Q ss_pred             CCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHH-HHHh
Q psy9067         104 HEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRH-LRIH  158 (189)
Q Consensus       104 ~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~h  158 (189)
                      ..++| |++|++.|.+..-|+.|+..    +.|.|.+|.+...+-..|..| +.+|
T Consensus         8 ~~kpw-cwycnrefddekiliqhqka----khfkchichkkl~sgpglsihcmqvh   58 (341)
T KOG2893|consen    8 VDKPW-CWYCNREFDDEKILIQHQKA----KHFKCHICHKKLFSGPGLSIHCMQVH   58 (341)
T ss_pred             cCCce-eeecccccchhhhhhhhhhh----ccceeeeehhhhccCCCceeehhhhh
Confidence            34554 89999999999999999764    679999998777777677666 4444

>KOG2231|consensus

Probab=95.48  E-value=0.074  Score=43.28  Aligned_cols=118  Identities=21%  Similarity=0.439  Sum_probs=65.6

Q ss_pred             cchhhHHHHHhhcCCCCCcccccCc---------ccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCcc
Q psy9067          46 KTIASLQNHINTHTGVKPHKCKYCE---------SRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYA  116 (189)
Q Consensus        46 ~~~~~l~~H~~~~~~~~~~~C~~C~---------~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~  116 (189)
                      ..-..|..|+...|..  +.|..|-         ........|..|+..--.         .  ......-..|..|...
T Consensus       125 ~s~~~Lk~H~~~~H~~--~~c~lC~~~~kif~~e~k~Yt~~el~~h~~~gd~---------d--~~s~rGhp~C~~C~~~  191 (669)
T KOG2231|consen  125 KSVENLKNHMRDQHKL--HLCSLCLQNLKIFINERKLYTRAELNLHLMFGDP---------D--DESCRGHPLCKFCHER  191 (669)
T ss_pred             hHHHHHHHHHHHhhhh--hccccccccceeeeeeeehehHHHHHHHHhcCCC---------c--cccccCCccchhhhhh
Confidence            3666788888554322  2233332         233455667777653000         0  0111223578899999


Q ss_pred             ccchHHHHhchhhcCCCCCccCccC------CccCCChHHHHHHHHHhhCCCcccCc--cch-hccCCchHHHHHHh
Q psy9067         117 SVELSKMRNHMRSHTGERPYQCAHC------TYASPDTFKLKRHLRIHTGEKPYACD--ICH-ARFTQSNSLKSHRL  184 (189)
Q Consensus       117 ~~~~~~l~~H~~~~~~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~~~~~C~--~C~-~~f~~~~~l~~H~~  184 (189)
                      |.....|+.|++.++    |.|..|      +..|..-..|..|.+.    ..|.|.  .|. +.|.....+..+++
T Consensus       192 fld~~el~rH~~~~h----~~chfC~~~~~~neyy~~~~dLe~HfR~----~HflCE~~~C~~~~f~~~~~~ei~lk  260 (669)
T KOG2231|consen  192 FLDDDELYRHLRFDH----EFCHFCDYKTGQNEYYNDYDDLEEHFRK----GHFLCEEEFCRTKKFYVAFELEIELK  260 (669)
T ss_pred             hccHHHHHHhhccce----eheeecCcccccchhcccchHHHHHhhh----cCccccccccccceeeehhHHHHHHH
Confidence            999999999887653    445555      3445555666666554    456776  563 44444444555554

>smart00451 ZnF_U1 U1-like zinc finger

Probab=94.94  E-value=0.016  Score=27.84  Aligned_cols=22  Identities=27%  Similarity=0.674  Sum_probs=15.0

Q ss_pred             cccCccchhccCCchHHHHHHh
Q psy9067         163 PYACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~  184 (189)
                      +|.|.+|++.|.....+..|++
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~   24 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLK   24 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHC
Confidence            4667777777777666777764

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>KOG2893|consensus

Probab=94.62  E-value=0.0072  Score=42.26  Aligned_cols=45  Identities=20%  Similarity=0.363  Sum_probs=31.0

Q ss_pred             eeeCCCcceeeechhHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHh
Q psy9067           7 YWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHIN   56 (189)
Q Consensus         7 ~~c~~c~~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~   56 (189)
                      =||=+|. ..|.....|.+|+++.+    |+|.+|.+...+--.|..|..
T Consensus        11 pwcwycn-refddekiliqhqkakh----fkchichkkl~sgpglsihcm   55 (341)
T KOG2893|consen   11 PWCWYCN-REFDDEKILIQHQKAKH----FKCHICHKKLFSGPGLSIHCM   55 (341)
T ss_pred             ceeeecc-cccchhhhhhhhhhhcc----ceeeeehhhhccCCCceeehh
Confidence            5777777 58888888888877643    778888776655444544443

>KOG2482|consensus

Probab=94.51  E-value=0.17  Score=37.53  Aligned_cols=64  Identities=23%  Similarity=0.452  Sum_probs=42.2

Q ss_pred             hHHHHHHhhCCCCCc--ccCCCCCcccc-chhhHHHHHhhcCC----------------------CCCcccccCcccCCC
Q psy9067          21 YLLARHLKSHSEERP--HKCSVCERGFK-TIASLQNHINTHTG----------------------VKPHKCKYCESRFTT   75 (189)
Q Consensus        21 ~~l~~h~~~~~~~~~--~~C~~C~~~f~-~~~~l~~H~~~~~~----------------------~~~~~C~~C~~~f~~   75 (189)
                      .+|.++|+.. ..+.  .+|-.|+..+. .++....|+-..++                      ...+.|-.|.+.|.+
T Consensus       129 eaLeqqQ~Er-edt~fslqClFCn~e~lgnRs~~l~Hlf~~H~lniGlpDniVyvnelLehLkekL~r~~CLyCekifrd  207 (423)
T KOG2482|consen  129 EALEQQQKER-EDTIFSLQCLFCNNEGLGNRSEILEHLFHVHGLNIGLPDNIVYVNELLEHLKEKLERLRCLYCEKIFRD  207 (423)
T ss_pred             HHHHHHHHHh-cCCeeeeEEEEecchhcccHHHHHHHHHHHhhhccCCCcceeeHHHHHHHHHHHHhhheeeeeccccCC
Confidence            3466666654 3333  46888876654 45555566544332                      123789999999999


Q ss_pred             hhHHHhhhhh
Q psy9067          76 SGELVRHVRY   85 (189)
Q Consensus        76 ~~~l~~h~~~   85 (189)
                      +..|+.||+.
T Consensus       208 kntLkeHMrk  217 (423)
T KOG2482|consen  208 KNTLKEHMRK  217 (423)
T ss_pred             cHHHHHHHHh
Confidence            9999999974

>cd00350 rubredoxin_like Rubredoxin_like; nonheme iron binding domain containing a [Fe(SCys)4] center

Probab=94.44  E-value=0.025  Score=26.97  Aligned_cols=10  Identities=30%  Similarity=0.926  Sum_probs=5.1

Q ss_pred             ccCCCCCccc
Q psy9067         108 HKCSICDYAS  117 (189)
Q Consensus       108 ~~C~~C~~~~  117 (189)
                      |+|..||..+
T Consensus         2 ~~C~~CGy~y   11 (33)
T cd00350           2 YVCPVCGYIY   11 (33)
T ss_pred             EECCCCCCEE
Confidence            4555555443

The family includes rubredoxins, a small electron transfer protein, and a slightly smaller modular rubredoxin domain present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase. In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), but iron can also be replaced by cobalt, nickel or zinc and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=94.38  E-value=0.017  Score=44.72  Aligned_cols=138  Identities=22%  Similarity=0.390  Sum_probs=82.9

Q ss_pred             CcccCCCCCccccchhhHHHHHh--hcCCC--CCcccc--cCcccCCChhHHHhhhhhhcCCCchhhh------------
Q psy9067          34 RPHKCSVCERGFKTIASLQNHIN--THTGV--KPHKCK--YCESRFTTSGELVRHVRYKHTHEKPELV------------   95 (189)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~--~~~~~--~~~~C~--~C~~~f~~~~~l~~h~~~~h~~~~~~~~------------   95 (189)
                      .++.|..|...|.....+..|..  .|..+  +++.|+  .|++.|.....+..|...+.........            
T Consensus       288 ~~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  367 (467)
T COG5048         288 LPIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTSISPAKEKLLNSSSKFSPLL  367 (467)
T ss_pred             cCCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccCCCccccccccCcccccccc
Confidence            35778888888888888888888  67777  788888  7888888888888888764444322000            


Q ss_pred             -------hhhhhccCCCCCccCC--CCCccccchHHHHhchhhcCCCC--CccCccCCccCCChHHHHHHHHHhhCCCcc
Q psy9067          96 -------RHVRYKHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGER--PYQCAHCTYASPDTFKLKRHLRIHTGEKPY  164 (189)
Q Consensus        96 -------~~~~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~~~~~~--~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  164 (189)
                             ..............+.  .|...+.....+..|...+....  .+.+..|...+.....+..|++.+....+.
T Consensus       368 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~  447 (467)
T COG5048         368 NNEPPQSLQQYKDLKNDKKSETLSNSCIRNFKRDSNLSLHIITHLSFRPYNCKNPPCSKSFNRHYNLIPHKKIHTNHAPL  447 (467)
T ss_pred             CCCCccchhhccCccCCccccccccchhhhhccccccccccccccccCCcCCCCCcchhhccCcccccccccccccCCce
Confidence                   0000001111112221  13334444444555555554444  355667888888888888887777766666


Q ss_pred             cCccchh
Q psy9067         165 ACDICHA  171 (189)
Q Consensus       165 ~C~~C~~  171 (189)
                      .|..++.
T Consensus       448 ~~~~~~~  454 (467)
T COG5048         448 LCSILKS  454 (467)
T ss_pred             eeccccc
Confidence            5555443

>KOG4173|consensus

Probab=94.11  E-value=0.029  Score=38.43  Aligned_cols=80  Identities=25%  Similarity=0.538  Sum_probs=61.7

Q ss_pred             CCCCCccCCC--CCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHH-Hh---------hCCCcccCcc--
Q psy9067         103 THEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLR-IH---------TGEKPYACDI--  168 (189)
Q Consensus       103 ~~~~~~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h---------~~~~~~~C~~--  168 (189)
                      ...+.+.|+.  |-..|.+.+.+..|..+.++.   .|..|.++|.+.-.|-.|+. .|         .|...|.|-+  
T Consensus        75 ~~~~~~~cqvagc~~~~d~lD~~E~hY~~~h~~---sCs~C~r~~Pt~hLLd~HI~E~HDs~Fqa~veRG~dMy~ClvEg  151 (253)
T KOG4173|consen   75 PRVPAFACQVAGCCQVFDALDDYEHHYHTLHGN---SCSFCKRAFPTGHLLDAHILEWHDSLFQALVERGQDMYQCLVEG  151 (253)
T ss_pred             cccccccccccchHHHHhhhhhHHHhhhhcccc---hhHHHHHhCCchhhhhHHHHHHHHHHHHHHHHcCccHHHHHHHh
Confidence            4445677877  667788888888887665554   89999999999988888864 23         3577899955  


Q ss_pred             chhccCCchHHHHHHhh
Q psy9067         169 CHARFTQSNSLKSHRLI  185 (189)
Q Consensus       169 C~~~f~~~~~l~~H~~~  185 (189)
                      |+..|.+...=..|+-.
T Consensus       152 Ct~KFkT~r~RkdH~I~  168 (253)
T KOG4173|consen  152 CTEKFKTSRDRKDHMIR  168 (253)
T ss_pred             hhhhhhhhhhhhhHHHH
Confidence            99999999888888743

>smart00451 ZnF_U1 U1-like zinc finger

Probab=93.71  E-value=0.057  Score=25.82  Aligned_cols=23  Identities=22%  Similarity=0.528  Sum_probs=14.1

Q ss_pred             cccCCCCCccccchhhHHHHHhh
Q psy9067          35 PHKCSVCERGFKTIASLQNHINT   57 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~   57 (189)
                      +|.|..|+..|.+...+..|+..
T Consensus         3 ~~~C~~C~~~~~~~~~~~~H~~g   25 (35)
T smart00451        3 GFYCKLCNVTFTDEISVEAHLKG   25 (35)
T ss_pred             CeEccccCCccCCHHHHHHHHCh
Confidence            35666666666666666666543

Family of C2H2-type zinc fingers, present in matrin, U1 small nuclear ribonucleoprotein C and other RNA-binding proteins.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=93.53  E-value=0.033  Score=29.50  Aligned_cols=24  Identities=21%  Similarity=0.391  Sum_probs=11.7

Q ss_pred             CCCccCccCCccCCChHHHHHHHH
Q psy9067         133 ERPYQCAHCTYASPDTFKLKRHLR  156 (189)
Q Consensus       133 ~~~~~C~~C~~~f~~~~~l~~H~~  156 (189)
                      +.-+.||-|+..|.....+..|..
T Consensus        15 E~~lrCPRC~~~FR~~K~Y~RHVN   38 (65)
T COG4049          15 EEFLRCPRCGMVFRRRKDYIRHVN   38 (65)
T ss_pred             ceeeeCCchhHHHHHhHHHHHHhh
Confidence            333455555555555555555543

>KOG2231|consensus

Probab=92.92  E-value=0.17  Score=41.32  Aligned_cols=111  Identities=21%  Similarity=0.294  Sum_probs=67.1

Q ss_pred             ccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhc-CCCCC----ccCc
Q psy9067          65 KCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSH-TGERP----YQCA  139 (189)
Q Consensus        65 ~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~-~~~~~----~~C~  139 (189)
                      .|..| ..|.....|+.|+...|....-.+..      ...+  .+..+++.|. ...|..|++.- .+++.    -.|.
T Consensus       117 ~~~~c-~~~~s~~~Lk~H~~~~H~~~~c~lC~------~~~k--if~~e~k~Yt-~~el~~h~~~gd~d~~s~rGhp~C~  186 (669)
T KOG2231|consen  117 ECLHC-TEFKSVENLKNHMRDQHKLHLCSLCL------QNLK--IFINERKLYT-RAELNLHLMFGDPDDESCRGHPLCK  186 (669)
T ss_pred             CCccc-cchhHHHHHHHHHHHhhhhhcccccc------ccce--eeeeeeeheh-HHHHHHHHhcCCCccccccCCccch
Confidence            35555 55568888999986544332110000      0001  2223334343 44566665542 22221    4788


Q ss_pred             cCCccCCChHHHHHHHHHhhCCCcccCccc------hhccCCchHHHHHHhhhCCC
Q psy9067         140 HCTYASPDTFKLKRHLRIHTGEKPYACDIC------HARFTQSNSLKSHRLIHTPL  189 (189)
Q Consensus       140 ~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C------~~~f~~~~~l~~H~~~h~~~  189 (189)
                      .|...|.....|..|++.+    .|.|..|      +.-|....+|..|-+..|.|
T Consensus       187 ~C~~~fld~~el~rH~~~~----h~~chfC~~~~~~neyy~~~~dLe~HfR~~Hfl  238 (669)
T KOG2231|consen  187 FCHERFLDDDELYRHLRFD----HEFCHFCDYKTGQNEYYNDYDDLEEHFRKGHFL  238 (669)
T ss_pred             hhhhhhccHHHHHHhhccc----eeheeecCcccccchhcccchHHHHHhhhcCcc
Confidence            8999999999999998754    4566666      45577888999999998875

>PF10571 UPF0547: Uncharacterised protein family UPF0547; InterPro: IPR018886 This domain may well be a type of zinc-finger as it carries two pairs of highly conserved cysteine residues though with no accompanying histidines

Probab=91.99  E-value=0.088  Score=23.55  Aligned_cols=9  Identities=33%  Similarity=0.774  Sum_probs=4.7

Q ss_pred             cCccchhcc
Q psy9067         165 ACDICHARF  173 (189)
Q Consensus       165 ~C~~C~~~f  173 (189)
                      .|+.||..|
T Consensus        16 ~Cp~CG~~F   24 (26)
T PF10571_consen   16 FCPHCGYDF   24 (26)
T ss_pred             cCCCCCCCC
Confidence            455555544

Several members are annotated as putative helicases.

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=91.54  E-value=0.43  Score=29.68  Aligned_cols=26  Identities=15%  Similarity=0.310  Sum_probs=23.9

Q ss_pred             cccC----ccchhccCCchHHHHHHhhhCC
Q psy9067         163 PYAC----DICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       163 ~~~C----~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      -|.|    ..|+....+...+.+|++.+||
T Consensus        80 G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   80 GYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            4899    9999999999999999999886

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>cd00729 rubredoxin_SM Rubredoxin, Small Modular nonheme iron binding domain containing a [Fe(SCys)4] center, present in rubrerythrin and nigerythrin and detected either N- or C-terminal to such proteins as flavin reductase, NAD(P)H-nitrite reductase, and ferredoxin-thioredoxin reductase

Probab=91.15  E-value=0.14  Score=24.56  Aligned_cols=10  Identities=30%  Similarity=1.029  Sum_probs=5.9

Q ss_pred             ccCCCCCccc
Q psy9067         108 HKCSICDYAS  117 (189)
Q Consensus       108 ~~C~~C~~~~  117 (189)
                      |+|..||..+
T Consensus         3 ~~C~~CG~i~   12 (34)
T cd00729           3 WVCPVCGYIH   12 (34)
T ss_pred             EECCCCCCEe
Confidence            5666666543

In rubredoxin, the iron atom is coordinated by four cysteine residues (Fe(S-Cys)4), and believed to be involved in electron transfer. Rubrerythrins and nigerythrins are small homodimeric proteins, generally consisting of 2 domains: a rubredoxin domain C-terminal to a non-sulfur, oxo-bridged diiron site in the N-terminal rubrerythrin domain. Rubrerythrins and nigerythrins have putative peroxide activity.

>COG4049 Uncharacterized protein containing archaeal-type C2H2 Zn-finger [General function prediction only]

Probab=91.13  E-value=0.11  Score=27.52  Aligned_cols=28  Identities=21%  Similarity=0.407  Sum_probs=16.7

Q ss_pred             CCCCcccCCCCCccccchhhHHHHHhhc
Q psy9067          31 SEERPHKCSVCERGFKTIASLQNHINTH   58 (189)
Q Consensus        31 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~   58 (189)
                      .++..+.|+.|+..|+....+..|....
T Consensus        13 DGE~~lrCPRC~~~FR~~K~Y~RHVNKa   40 (65)
T COG4049          13 DGEEFLRCPRCGMVFRRRKDYIRHVNKA   40 (65)
T ss_pred             CCceeeeCCchhHHHHHhHHHHHHhhHH
Confidence            3445556666666666666666665543

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=90.91  E-value=0.19  Score=31.21  Aligned_cols=15  Identities=20%  Similarity=0.352  Sum_probs=11.0

Q ss_pred             CCccCCCCCccccch
Q psy9067         106 KPHKCSICDYASVEL  120 (189)
Q Consensus       106 ~~~~C~~C~~~~~~~  120 (189)
                      .|.+|+.||..|.-.
T Consensus        25 ~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   25 DPIVCPKCGTEFPPE   39 (108)
T ss_pred             CCccCCCCCCccCcc
Confidence            456788888877665

The function of members of this family is unknown.

>PF13719 zinc_ribbon_5: zinc-ribbon domain

Probab=90.86  E-value=0.19  Score=24.56  Aligned_cols=33  Identities=18%  Similarity=0.336  Sum_probs=17.4

Q ss_pred             ccCCCCCccccchHHHHhchhhcCCCCCccCccCCccC
Q psy9067         108 HKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYAS  145 (189)
Q Consensus       108 ~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f  145 (189)
                      .+|+.|+..|.-.++-     ...+....+|+.|+..|
T Consensus         3 i~CP~C~~~f~v~~~~-----l~~~~~~vrC~~C~~~f   35 (37)
T PF13719_consen    3 ITCPNCQTRFRVPDDK-----LPAGGRKVRCPKCGHVF   35 (37)
T ss_pred             EECCCCCceEEcCHHH-----cccCCcEEECCCCCcEe
Confidence            3566666666655541     11223345666666554

>KOG2785|consensus

Probab=90.65  E-value=1.3  Score=33.73  Aligned_cols=51  Identities=25%  Similarity=0.461  Sum_probs=43.6

Q ss_pred             CccCCCCCccccchHHHHhchhhcCCC-----------------------CCccCccCC---ccCCChHHHHHHHHH
Q psy9067         107 PHKCSICDYASVELSKMRNHMRSHTGE-----------------------RPYQCAHCT---YASPDTFKLKRHLRI  157 (189)
Q Consensus       107 ~~~C~~C~~~~~~~~~l~~H~~~~~~~-----------------------~~~~C~~C~---~~f~~~~~l~~H~~~  157 (189)
                      |-.|.+|++.+++-..-..|+..+++.                       .-+.|-.|.   +.|.+....+.|+..
T Consensus       166 Pt~CLfC~~~~k~~e~~~~HM~~~HgffIPdreYL~D~~GLl~YLgeKV~~~~~CL~CN~~~~~f~sleavr~HM~~  242 (390)
T KOG2785|consen  166 PTDCLFCDKKSKSLEENLKHMFKEHGFFIPDREYLTDEKGLLKYLGEKVGIGFICLFCNELGRPFSSLEAVRAHMRD  242 (390)
T ss_pred             CcceeecCCCcccHHHHHHHHhhccCCcCCchHhhhchhHHHHHHHHHhccCceEEEeccccCcccccHHHHHHHhh
Confidence            468999999999999999999887764                       227888887   999999999999975

>COG5048 FOG: Zn-finger [General function prediction only]

Probab=90.59  E-value=0.053  Score=41.95  Aligned_cols=54  Identities=39%  Similarity=0.827  Sum_probs=48.2

Q ss_pred             CccCccCCccCCChHHHHHHHH--HhhCC--CcccCc--cchhccCCchHHHHHHhhhCC
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLR--IHTGE--KPYACD--ICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~--~h~~~--~~~~C~--~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ++.|..|...|.....+..|.+  .|.++  +++.|+  .|++.|.+...+..|..+|.+
T Consensus       289 ~~~~~~~~~~~s~~~~l~~~~~~~~h~~~~~~~~~~p~~~~~~~~~~~~~~~~~~~~~~~  348 (467)
T COG5048         289 PIKSKQCNISFSRSSPLTRHLRSVNHSGESLKPFSCPYSLCGKLFSRNDALKRHILLHTS  348 (467)
T ss_pred             CCCCccccCCccccccccccccccccccccCCceeeeccCCCccccccccccCCcccccC
Confidence            5788899999999999999999  79999  899999  799999999999998888765

>TIGR00622 ssl1 transcription factor ssl1

Probab=90.57  E-value=0.66  Score=28.90  Aligned_cols=21  Identities=24%  Similarity=0.623  Sum_probs=10.0

Q ss_pred             cccCccchhccCCchHHHHHH
Q psy9067         163 PYACDICHARFTQSNSLKSHR  183 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~  183 (189)
                      .|+|+.|..-|-..=+.-.|-
T Consensus        81 ~y~C~~C~~~FC~dCD~fiHe  101 (112)
T TIGR00622        81 RYVCAVCKNVFCVDCDVFVHE  101 (112)
T ss_pred             ceeCCCCCCccccccchhhhh
Confidence            455555555554444444443

This family is based on the phylogenomic analysis of JA Eisen (1999, Ph.D. Thesis, Stanford University).

>PF05443 ROS_MUCR: ROS/MUCR transcriptional regulator protein; InterPro: IPR008807 This family consists of several ROS/MUCR transcriptional regulator proteins

Probab=90.41  E-value=0.17  Score=32.59  Aligned_cols=25  Identities=40%  Similarity=0.674  Sum_probs=10.7

Q ss_pred             ccCccCCccCCChHHHHHHHHHhhCCCc
Q psy9067         136 YQCAHCTYASPDTFKLKRHLRIHTGEKP  163 (189)
Q Consensus       136 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~  163 (189)
                      -.|-+||+.|...   ..|++.|+|..|
T Consensus        73 i~clecGk~~k~L---krHL~~~~gltp   97 (132)
T PF05443_consen   73 IICLECGKKFKTL---KRHLRTHHGLTP   97 (132)
T ss_dssp             EE-TBT--EESBH---HHHHHHTT-S-H
T ss_pred             eEEccCCcccchH---HHHHHHccCCCH
Confidence            4555566655532   555555555543

The ros chromosomal gene is present in octopine and nopaline strains of Agrobacterium tumefaciens as well as in Rhizobium meliloti (Sinorhizobium meliloti). This gene encodes a 15.5 kDa protein that specifically represses the virC and virD operons in the virulence region of the Ti plasmid [] and is necessary for succinoglycan production []. S. meliloti can produce two types of acidic exopolysaccharides, succinoglycan and galactoglucan, that are interchangeable for infection of Medicago sativa (Alfalfa) nodules. MucR from S. meliloti acts as a transcriptional repressor that blocks the expression of the exp genes responsible for galactoglucan production therefore allowing the exclusive production of succinoglycan [].; GO: 0003677 DNA binding, 0008270 zinc ion binding, 0006355 regulation of transcription, DNA-dependent; PDB: 2JSP_A.

>PF13717 zinc_ribbon_4: zinc-ribbon domain

Probab=90.23  E-value=0.27  Score=23.90  Aligned_cols=33  Identities=15%  Similarity=0.249  Sum_probs=18.3

Q ss_pred             ccCCCCCccccchHHHHhchhhcCCCCCccCccCCccC
Q psy9067         108 HKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYAS  145 (189)
Q Consensus       108 ~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f  145 (189)
                      ..|+.|+..|.-.++..     .......+|+.|+..|
T Consensus         3 i~Cp~C~~~y~i~d~~i-----p~~g~~v~C~~C~~~f   35 (36)
T PF13717_consen    3 ITCPNCQAKYEIDDEKI-----PPKGRKVRCSKCGHVF   35 (36)
T ss_pred             EECCCCCCEEeCCHHHC-----CCCCcEEECCCCCCEe
Confidence            35777777766665532     1222345666666554

>PF02892 zf-BED: BED zinc finger; InterPro: IPR003656 Zinc finger (Znf) domains are relatively small protein motifs which contain multiple finger-like protrusions that make tandem contacts with their target molecule

Probab=89.79  E-value=0.19  Score=25.62  Aligned_cols=27  Identities=26%  Similarity=0.378  Sum_probs=13.8

Q ss_pred             CCcccCccchhccCCc----hHHHHHHhhhC
Q psy9067         161 EKPYACDICHARFTQS----NSLKSHRLIHT  187 (189)
Q Consensus       161 ~~~~~C~~C~~~f~~~----~~l~~H~~~h~  187 (189)
                      ....+|..|++.+...    ++|..|++..|
T Consensus        14 ~~~a~C~~C~~~~~~~~~~ts~l~~HL~~~h   44 (45)
T PF02892_consen   14 KKKAKCKYCGKVIKYSSGGTSNLKRHLKKKH   44 (45)
T ss_dssp             SS-EEETTTTEE-----SSTHHHHHHHHHTT
T ss_pred             cCeEEeCCCCeEEeeCCCcHHHHHHhhhhhC
Confidence            3445666666665543    66777775544

Some of these domains bind zinc, but many do not; instead binding other metals such as iron, or no metal at all. For example, some family members form salt bridges to stabilise the finger-like folds. They were first identified as a DNA-binding motif in transcription factor TFIIIA from Xenopus laevis (African clawed frog), however they are now recognised to bind DNA, RNA, protein and/or lipid substrates [, , , , ]. Their binding properties depend on the amino acid sequence of the finger domains and of the linker between fingers, as well as on the higher-order structures and the number of fingers. Znf domains are often found in clusters, where fingers can have different binding specificities. There are many superfamilies of Znf motifs, varying in both sequence and structure. They display considerable versatility in binding modes, even between members of the same class (e.g. some bind DNA, others protein), suggesting that Znf motifs are stable scaffolds that have evolved specialised functions. For example, Znf-containing proteins function in gene transcription, translation, mRNA trafficking, cytoskeleton organisation, epithelial development, cell adhesion, protein folding, chromatin remodelling and zinc sensing, to name but a few []. Zinc-binding motifs are stable structures, and they rarely undergo conformational changes upon binding their target. This entry represents predicted BED-type zinc finger domains. The BED finger which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain []. Some proteins known to contain a BED domain include animal, plant and fungi AC1 and Hobo-like transposases; Caenorhabditis elegans Dpy-20 protein, a predicted cuticular gene transcriptional regulator; Drosophila BEAF (boundary element-associated factor), thought to be involved in chromatin insulation; Drosophila DREF, a transcriptional regulator for S-phase genes; and tobacco 3AF1 and tomato E4/E8-BP1, light- and ethylene-regulated DNA binding proteins that contain two BED fingers. More information about these proteins can be found at Protein of the Month: Zinc Fingers [].; GO: 0003677 DNA binding; PDB: 2DJR_A 2CT5_A.

>smart00531 TFIIE Transcription initiation factor IIE

Probab=89.38  E-value=0.82  Score=30.16  Aligned_cols=46  Identities=15%  Similarity=0.330  Sum_probs=28.5

Q ss_pred             HHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccC
Q psy9067          24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRF   73 (189)
Q Consensus        24 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f   73 (189)
                      ..-.........|.|+.|+..|.....+..    ......|.|+.||...
T Consensus        88 ~~~l~~e~~~~~Y~Cp~C~~~y~~~ea~~~----~d~~~~f~Cp~Cg~~l  133 (147)
T smart00531       88 EDKLEDETNNAYYKCPNCQSKYTFLEANQL----LDMDGTFTCPRCGEEL  133 (147)
T ss_pred             HHHHhcccCCcEEECcCCCCEeeHHHHHHh----cCCCCcEECCCCCCEE
Confidence            333334445567999999999875333221    1123449999999864

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=88.73  E-value=0.3  Score=32.74  Aligned_cols=10  Identities=40%  Similarity=0.880  Sum_probs=5.7

Q ss_pred             CCCccCccCC
Q psy9067         133 ERPYQCAHCT  142 (189)
Q Consensus       133 ~~~~~C~~C~  142 (189)
                      +-|..||+||
T Consensus       147 e~P~~CPiCg  156 (166)
T COG1592         147 EAPEVCPICG  156 (166)
T ss_pred             CCCCcCCCCC
Confidence            4555666665

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=88.42  E-value=0.76  Score=30.73  Aligned_cols=42  Identities=14%  Similarity=0.252  Sum_probs=29.0

Q ss_pred             HHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccC
Q psy9067          23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRF   73 (189)
Q Consensus        23 l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f   73 (189)
                      |..-+....+..-|.|+.|+..|+....+.         ..|.|+.||...
T Consensus        97 lk~~l~~e~~~~~Y~Cp~c~~r~tf~eA~~---------~~F~Cp~Cg~~L  138 (158)
T TIGR00373        97 LREKLEFETNNMFFICPNMCVRFTFNEAME---------LNFTCPRCGAML  138 (158)
T ss_pred             HHHHHhhccCCCeEECCCCCcEeeHHHHHH---------cCCcCCCCCCEe
Confidence            334444445556688999998887666653         369999999763

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>TIGR02098 MJ0042_CXXC MJ0042 family finger-like domain

Probab=88.26  E-value=0.36  Score=23.60  Aligned_cols=33  Identities=12%  Similarity=0.295  Sum_probs=16.3

Q ss_pred             ccCCCCCccccchHHHHhchhhcCCCCCccCccCCccC
Q psy9067         108 HKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYAS  145 (189)
Q Consensus       108 ~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f  145 (189)
                      +.|+.|+..|.-..+...     .......|+.|+..|
T Consensus         3 ~~CP~C~~~~~v~~~~~~-----~~~~~v~C~~C~~~~   35 (38)
T TIGR02098         3 IQCPNCKTSFRVVDSQLG-----ANGGKVRCGKCGHVW   35 (38)
T ss_pred             EECCCCCCEEEeCHHHcC-----CCCCEEECCCCCCEE
Confidence            456666666655544211     111134666666554

This domain contains a CXXCX(19)CXXC motif suggestive of both zinc fingers and thioredoxin, usually found at the N-terminus of prokaryotic proteins. One partially characterized gene, agmX, is among a large set in Myxococcus whose interruption affects adventurous gliding motility.

>KOG2482|consensus

Probab=88.24  E-value=0.44  Score=35.52  Aligned_cols=26  Identities=19%  Similarity=0.473  Sum_probs=21.4

Q ss_pred             cccccCcccCCChhHHHhhhhhhcCC
Q psy9067          64 HKCKYCESRFTTSGELVRHVRYKHTH   89 (189)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~h~~~~h~~   89 (189)
                      ..|-+|.........|..|+++.|.-
T Consensus       280 v~CLfC~~~~en~~~l~eHmk~vHe~  305 (423)
T KOG2482|consen  280 VVCLFCTNFYENPVFLFEHMKIVHEF  305 (423)
T ss_pred             eEEEeeccchhhHHHHHHHHHHHHHh
Confidence            48999998888889999999876643

>PF09538 FYDLN_acid: Protein of unknown function (FYDLN_acid); InterPro: IPR012644 Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues

Probab=87.93  E-value=0.37  Score=29.92  Aligned_cols=29  Identities=24%  Similarity=0.617  Sum_probs=17.3

Q ss_pred             cCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCCh
Q psy9067         109 KCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDT  148 (189)
Q Consensus       109 ~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~  148 (189)
                      .|+.||+.|-..           +..|-.|+.||..|...
T Consensus        11 ~Cp~CG~kFYDL-----------nk~PivCP~CG~~~~~~   39 (108)
T PF09538_consen   11 TCPSCGAKFYDL-----------NKDPIVCPKCGTEFPPE   39 (108)
T ss_pred             cCCCCcchhccC-----------CCCCccCCCCCCccCcc
Confidence            677777665332           22566677777666554

The function of members of this family is unknown.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=87.91  E-value=0.13  Score=36.22  Aligned_cols=43  Identities=26%  Similarity=0.590  Sum_probs=24.9

Q ss_pred             CCccCCCCCccccchHHHHhchhh---c-------CCCCC-----ccCccCCccCCCh
Q psy9067         106 KPHKCSICDYASVELSKMRNHMRS---H-------TGERP-----YQCAHCTYASPDT  148 (189)
Q Consensus       106 ~~~~C~~C~~~~~~~~~l~~H~~~---~-------~~~~~-----~~C~~C~~~f~~~  148 (189)
                      +.+.||+|++.|....-.....+.   .       .+..|     ..||.||.++...
T Consensus         4 k~~~CPvC~~~F~~~~vrs~~~r~~~~d~D~~~~Y~~vnP~~Y~V~vCP~CgyA~~~~   61 (214)
T PF09986_consen    4 KKITCPVCGKEFKTKKVRSGKIRVIRRDSDFCPRYKGVNPLFYEVWVCPHCGYAAFEE   61 (214)
T ss_pred             CceECCCCCCeeeeeEEEcCCceEeeecCCCccccCCCCCeeeeEEECCCCCCccccc
Confidence            457899999888776443333221   1       11222     5777787766644

>smart00531 TFIIE Transcription initiation factor IIE

Probab=87.56  E-value=0.67  Score=30.58  Aligned_cols=41  Identities=22%  Similarity=0.313  Sum_probs=26.7

Q ss_pred             CCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccc
Q psy9067          59 TGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVE  119 (189)
Q Consensus        59 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~  119 (189)
                      .+...|.|+.|+..|.....+..                   .. ....|.||.||.....
T Consensus        95 ~~~~~Y~Cp~C~~~y~~~ea~~~-------------------~d-~~~~f~Cp~Cg~~l~~  135 (147)
T smart00531       95 TNNAYYKCPNCQSKYTFLEANQL-------------------LD-MDGTFTCPRCGEELEE  135 (147)
T ss_pred             cCCcEEECcCCCCEeeHHHHHHh-------------------cC-CCCcEECCCCCCEEEE
Confidence            34556999999999886443321                   01 2344999999977543

>smart00614 ZnF_BED BED zinc finger

Probab=87.21  E-value=0.5  Score=24.78  Aligned_cols=23  Identities=22%  Similarity=0.528  Sum_probs=14.9

Q ss_pred             ccCccchhccCCc-----hHHHHHHhhh
Q psy9067         164 YACDICHARFTQS-----NSLKSHRLIH  186 (189)
Q Consensus       164 ~~C~~C~~~f~~~-----~~l~~H~~~h  186 (189)
                      -.|..|++.++..     ++|.+|++..
T Consensus        19 a~C~~C~~~l~~~~~~gTs~L~rHl~~~   46 (50)
T smart00614       19 AKCKYCGKKLSRSSKGGTSNLRRHLRRK   46 (50)
T ss_pred             EEecCCCCEeeeCCCCCcHHHHHHHHhH
Confidence            4566676666544     5788888743

DNA-binding domain in chromatin-boundary-element-binding proteins and transposases

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=87.15  E-value=0.85  Score=31.16  Aligned_cols=43  Identities=16%  Similarity=0.375  Sum_probs=28.8

Q ss_pred             HHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCC
Q psy9067          23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFT   74 (189)
Q Consensus        23 l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~   74 (189)
                      |..-+.......-|.|+.|+..|+....+.         ..|.|+.||....
T Consensus       105 lk~~l~~e~~~~~Y~Cp~C~~rytf~eA~~---------~~F~Cp~Cg~~L~  147 (178)
T PRK06266        105 LKEQLEEEENNMFFFCPNCHIRFTFDEAME---------YGFRCPQCGEMLE  147 (178)
T ss_pred             HHHHhhhccCCCEEECCCCCcEEeHHHHhh---------cCCcCCCCCCCCe
Confidence            334444444455688999998887655432         3799999997643

>smart00734 ZnF_Rad18 Rad18-like CCHC zinc finger

Probab=86.84  E-value=0.53  Score=20.99  Aligned_cols=20  Identities=25%  Similarity=0.521  Sum_probs=12.8

Q ss_pred             ccCccchhccCCchHHHHHHh
Q psy9067         164 YACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~  184 (189)
                      ..||+|++.+ ....+..|+-
T Consensus         2 v~CPiC~~~v-~~~~in~HLD   21 (26)
T smart00734        2 VQCPVCFREV-PENLINSHLD   21 (26)
T ss_pred             CcCCCCcCcc-cHHHHHHHHH
Confidence            3577777776 4455667654

Yeast Rad18p functions with Rad5p in error-free post-replicative DNA repair. This zinc finger is likely to bind nucleic-acids.

>TIGR00373 conserved hypothetical protein TIGR00373

Probab=86.19  E-value=0.85  Score=30.52  Aligned_cols=34  Identities=12%  Similarity=0.359  Sum_probs=27.5

Q ss_pred             ceEEeeeCCCcceeeechhHHHHHHhhCCCCCcccCCCCCcccc
Q psy9067           3 NTIYYWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFK   46 (189)
Q Consensus         3 ~~~~~~c~~c~~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~f~   46 (189)
                      |...|.|+.|+ ..|+-..++.         .-|.|+.||....
T Consensus       106 ~~~~Y~Cp~c~-~r~tf~eA~~---------~~F~Cp~Cg~~L~  139 (158)
T TIGR00373       106 NNMFFICPNMC-VRFTFNEAME---------LNFTCPRCGAMLD  139 (158)
T ss_pred             CCCeEECCCCC-cEeeHHHHHH---------cCCcCCCCCCEee
Confidence            56789999999 6888888874         2699999998754

This family of proteins is, so far, restricted to archaeal genomes. The family appears to be distantly related to the N-terminal region of the eukaryotic transcription initiation factor IIE alpha chain.

>PHA00626 hypothetical protein

Probab=85.83  E-value=0.29  Score=26.06  Aligned_cols=13  Identities=23%  Similarity=0.447  Sum_probs=7.1

Q ss_pred             CcccCccchhccC
Q psy9067         162 KPYACDICHARFT  174 (189)
Q Consensus       162 ~~~~C~~C~~~f~  174 (189)
                      ..|.|+.||..|+
T Consensus        22 nrYkCkdCGY~ft   34 (59)
T PHA00626         22 DDYVCCDCGYNDS   34 (59)
T ss_pred             cceEcCCCCCeec
Confidence            3455555555554

>PF12013 DUF3505: Protein of unknown function (DUF3505); InterPro: IPR022698 This family of proteins is functionally uncharacterised

Probab=84.91  E-value=2.2  Score=26.48  Aligned_cols=27  Identities=30%  Similarity=0.783  Sum_probs=20.1

Q ss_pred             CCccC----ccCCccCCChHHHHHHHHHhhC
Q psy9067         134 RPYQC----AHCTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       134 ~~~~C----~~C~~~f~~~~~l~~H~~~h~~  160 (189)
                      .-|.|    +.|+....+...+..|++.+++
T Consensus        79 ~G~~C~~~~~~C~y~~~~~~~m~~H~~~~Hg  109 (109)
T PF12013_consen   79 DGYRCQCDPPHCGYITRSKKTMRKHWRKEHG  109 (109)
T ss_pred             CCeeeecCCCCCCcEeccHHHHHHHHHHhcC
Confidence            34778    7888888888888888776543

This protein is found in eukaryotes. Proteins in this family are typically between 247 to 1018 amino acids in length. This region contains two segments that are likely to be C2H2 zinc binding domains.

>PF09986 DUF2225: Uncharacterized protein conserved in bacteria (DUF2225); InterPro: IPR018708 This conserved bacterial family has no known function

Probab=84.87  E-value=0.17  Score=35.64  Aligned_cols=13  Identities=38%  Similarity=0.795  Sum_probs=10.1

Q ss_pred             ccCCCCCccccch
Q psy9067         108 HKCSICDYASVEL  120 (189)
Q Consensus       108 ~~C~~C~~~~~~~  120 (189)
                      ++||.||.++...
T Consensus        49 ~vCP~CgyA~~~~   61 (214)
T PF09986_consen   49 WVCPHCGYAAFEE   61 (214)
T ss_pred             EECCCCCCccccc
Confidence            5899999886544

>COG5236 Uncharacterized conserved protein, contains RING Zn-finger [General function prediction only]

Probab=83.97  E-value=0.49  Score=35.35  Aligned_cols=78  Identities=21%  Similarity=0.404  Sum_probs=41.1

Q ss_pred             ccCCC--CCccccchHHHHhchhhcCCCCCccCccC---CccCC------ChHHHHHHHHHhhCCCc----ccCccchhc
Q psy9067         108 HKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHC---TYASP------DTFKLKRHLRIHTGEKP----YACDICHAR  172 (189)
Q Consensus       108 ~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~C~~C---~~~f~------~~~~l~~H~~~h~~~~~----~~C~~C~~~  172 (189)
                      |.||.  |.........|..|....++.  +-|.+|   .+.|.      +...|+.|......+.-    -.|..|..-
T Consensus       152 F~CP~skc~~~C~~~k~lk~H~K~~H~~--~~C~~C~~nKk~F~~E~~lF~~~~Lr~H~~~G~~e~GFKGHP~C~FC~~~  229 (493)
T COG5236         152 FKCPKSKCHRRCGSLKELKKHYKAQHGF--VLCSECIGNKKDFWNEIRLFRSSTLRDHKNGGLEEEGFKGHPLCIFCKIY  229 (493)
T ss_pred             hcCCchhhhhhhhhHHHHHHHHHhhcCc--EEhHhhhcCcccCccceeeeecccccccccCCccccCcCCCchhhhccce
Confidence            56654  555556667777776654432  233333   12222      33455555544333322    246666666


Q ss_pred             cCCchHHHHHHhhhC
Q psy9067         173 FTQSNSLKSHRLIHT  187 (189)
Q Consensus       173 f~~~~~l~~H~~~h~  187 (189)
                      |.....|.+|++..|
T Consensus       230 FYdDDEL~~HcR~~H  244 (493)
T COG5236         230 FYDDDELRRHCRLRH  244 (493)
T ss_pred             ecChHHHHHHHHhhh
Confidence            666666766666543

>COG1592 Rubrerythrin [Energy production and conversion]

Probab=83.89  E-value=1.6  Score=29.40  Aligned_cols=26  Identities=27%  Similarity=0.681  Sum_probs=19.7

Q ss_pred             CCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcc
Q psy9067          33 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCES   71 (189)
Q Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~   71 (189)
                      .+.|.|++||..+             .++-|-.||+|+-
T Consensus       132 ~~~~vC~vCGy~~-------------~ge~P~~CPiCga  157 (166)
T COG1592         132 GKVWVCPVCGYTH-------------EGEAPEVCPICGA  157 (166)
T ss_pred             CCEEEcCCCCCcc-------------cCCCCCcCCCCCC
Confidence            3478999998864             3466888999983

>COG2888 Predicted Zn-ribbon RNA-binding protein with a function in translation [Translation, ribosomal structure and biogenesis]

Probab=83.60  E-value=2  Score=23.30  Aligned_cols=9  Identities=33%  Similarity=1.051  Sum_probs=5.3

Q ss_pred             CCcccccCc
Q psy9067          62 KPHKCKYCE   70 (189)
Q Consensus        62 ~~~~C~~C~   70 (189)
                      .+|.|+.||
T Consensus        49 ~~Y~Cp~CG   57 (61)
T COG2888          49 NPYRCPKCG   57 (61)
T ss_pred             CceECCCcC
Confidence            356666665

>PRK06266 transcription initiation factor E subunit alpha; Validated

Probab=83.32  E-value=1.3  Score=30.27  Aligned_cols=35  Identities=11%  Similarity=0.450  Sum_probs=27.1

Q ss_pred             ceEEeeeCCCcceeeechhHHHHHHhhCCCCCcccCCCCCccccc
Q psy9067           3 NTIYYWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKT   47 (189)
Q Consensus         3 ~~~~~~c~~c~~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~   47 (189)
                      +...|.|+.|+ ..|.-..++.         .-|.|+.||.....
T Consensus       114 ~~~~Y~Cp~C~-~rytf~eA~~---------~~F~Cp~Cg~~L~~  148 (178)
T PRK06266        114 NNMFFFCPNCH-IRFTFDEAME---------YGFRCPQCGEMLEE  148 (178)
T ss_pred             CCCEEECCCCC-cEEeHHHHhh---------cCCcCCCCCCCCee
Confidence            45689999999 6888777653         36999999987643

>PF14369 zf-RING_3: zinc-finger

Probab=83.14  E-value=0.52  Score=22.73  Aligned_cols=9  Identities=44%  Similarity=1.257  Sum_probs=6.0

Q ss_pred             cCCCCCccc
Q psy9067          37 KCSVCERGF   45 (189)
Q Consensus        37 ~C~~C~~~f   45 (189)
                      .|+.|+..|
T Consensus        23 ~CP~C~~gF   31 (35)
T PF14369_consen   23 ACPRCHGGF   31 (35)
T ss_pred             CCcCCCCcE
Confidence            477777665

>smart00659 RPOLCX RNA polymerase subunit CX

Probab=82.42  E-value=0.8  Score=23.36  Aligned_cols=11  Identities=18%  Similarity=0.416  Sum_probs=5.7

Q ss_pred             ccCCCCCcccc
Q psy9067         108 HKCSICDYASV  118 (189)
Q Consensus       108 ~~C~~C~~~~~  118 (189)
                      |.|..||..+.
T Consensus         3 Y~C~~Cg~~~~   13 (44)
T smart00659        3 YICGECGRENE   13 (44)
T ss_pred             EECCCCCCEee
Confidence            45555555443

present in RNA polymerase I, II and III

>TIGR02300 FYDLN_acid conserved hypothetical protein TIGR02300

Probab=82.40  E-value=1.2  Score=28.37  Aligned_cols=15  Identities=7%  Similarity=-0.077  Sum_probs=11.1

Q ss_pred             CCccCCCCCccccch
Q psy9067         106 KPHKCSICDYASVEL  120 (189)
Q Consensus       106 ~~~~C~~C~~~~~~~  120 (189)
                      .|..|+.||..|.-.
T Consensus        25 ~p~vcP~cg~~~~~~   39 (129)
T TIGR02300        25 RPAVSPYTGEQFPPE   39 (129)
T ss_pred             CCccCCCcCCccCcc
Confidence            467888888887655

Members of this family are bacterial proteins with a conserved motif [KR]FYDLN, sometimes flanked by a pair of CXXC motifs, followed by a long region of low complexity sequence in which roughly half the residues are Asp and Glu, including multiple runs of five or more acidic residues. The function of members of this family is unknown.

>COG5151 SSL1 RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1 [Transcription / DNA replication, recombination, and repair]

Probab=81.28  E-value=1.3  Score=32.68  Aligned_cols=23  Identities=13%  Similarity=0.218  Sum_probs=11.1

Q ss_pred             CccCCCCCccccchHHHHhchhh
Q psy9067         107 PHKCSICDYASVELSKMRNHMRS  129 (189)
Q Consensus       107 ~~~C~~C~~~~~~~~~l~~H~~~  129 (189)
                      .|+|+.|...|-..-+...|...
T Consensus       388 rY~Ce~CK~~FC~dCdvfiHe~L  410 (421)
T COG5151         388 RYQCELCKSTFCSDCDVFIHETL  410 (421)
T ss_pred             ceechhhhhhhhhhhHHHHHHHH
Confidence            35555555555554444444433

>PRK00464 nrdR transcriptional regulator NrdR; Validated

Probab=81.12  E-value=0.24  Score=32.84  Aligned_cols=15  Identities=13%  Similarity=0.246  Sum_probs=9.7

Q ss_pred             ccCccCCccCCChHH
Q psy9067         136 YQCAHCTYASPDTFK  150 (189)
Q Consensus       136 ~~C~~C~~~f~~~~~  150 (189)
                      ++|+.||..|.....
T Consensus        29 ~~c~~c~~~f~~~e~   43 (154)
T PRK00464         29 RECLACGKRFTTFER   43 (154)
T ss_pred             eeccccCCcceEeEe
Confidence            677777777765443

>PRK00398 rpoP DNA-directed RNA polymerase subunit P; Provisional

Probab=80.98  E-value=1  Score=23.09  Aligned_cols=12  Identities=25%  Similarity=0.808  Sum_probs=8.7

Q ss_pred             CccCCCCCcccc
Q psy9067         107 PHKCSICDYASV  118 (189)
Q Consensus       107 ~~~C~~C~~~~~  118 (189)
                      ...|+.||..+.
T Consensus        21 ~~~Cp~CG~~~~   32 (46)
T PRK00398         21 GVRCPYCGYRIL   32 (46)
T ss_pred             ceECCCCCCeEE
Confidence            578999986543

>PRK14890 putative Zn-ribbon RNA-binding protein; Provisional

Probab=80.84  E-value=1.2  Score=24.25  Aligned_cols=10  Identities=40%  Similarity=1.108  Sum_probs=5.7

Q ss_pred             CcccCccchh
Q psy9067         162 KPYACDICHA  171 (189)
Q Consensus       162 ~~~~C~~C~~  171 (189)
                      .+|.|+.||.
T Consensus        47 ~~Y~CP~CGF   56 (59)
T PRK14890         47 NPYTCPKCGF   56 (59)
T ss_pred             CceECCCCCC
Confidence            3566666654

>PF03604 DNA_RNApol_7kD: DNA directed RNA polymerase, 7 kDa subunit; InterPro: IPR006591 DNA-dependent RNA polymerase catalyzes the transcription of DNA into RNA using the four ribonucleoside triphosphates as substrates

Probab=80.64  E-value=0.96  Score=21.32  Aligned_cols=9  Identities=22%  Similarity=0.575  Sum_probs=4.1

Q ss_pred             cCCCCCccc
Q psy9067         109 KCSICDYAS  117 (189)
Q Consensus       109 ~C~~C~~~~  117 (189)
                      .|..||..+
T Consensus         2 ~C~~Cg~~~   10 (32)
T PF03604_consen    2 ICGECGAEV   10 (32)
T ss_dssp             BESSSSSSE
T ss_pred             CCCcCCCee
Confidence            344444443

Each class of RNA polymerase is assembled from 9 to 15 different polypeptides. Rbp10 (RNA polymerase CX) is a domain found in RNA polymerase subunit 10; present in RNA polymerase I, II and III.; GO: 0003677 DNA binding, 0003899 DNA-directed RNA polymerase activity, 0006351 transcription, DNA-dependent; PDB: 2PMZ_Z 3HKZ_X 2NVX_L 3S1Q_L 2JA6_L 3S17_L 3HOW_L 3HOV_L 3PO2_L 3HOZ_L ....

>smart00834 CxxC_CXXC_SSSS Putative regulatory protein

Probab=80.14  E-value=0.62  Score=23.04  Aligned_cols=29  Identities=21%  Similarity=0.432  Sum_probs=15.0

Q ss_pred             ccCCCCCccccchHHHHhchhhcCCCCCccCccCCc
Q psy9067         108 HKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTY  143 (189)
Q Consensus       108 ~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~  143 (189)
                      |+|+.||..|.......       ....-.|+.||.
T Consensus         6 y~C~~Cg~~fe~~~~~~-------~~~~~~CP~Cg~   34 (41)
T smart00834        6 YRCEDCGHTFEVLQKIS-------DDPLATCPECGG   34 (41)
T ss_pred             EEcCCCCCEEEEEEecC-------CCCCCCCCCCCC
Confidence            56777776664433210       123446666664

CxxC_CXXC_SSSS represents a region of about 41 amino acids found in a number of small proteins in a wide range of bacteria. The region usually begins with the initiator Met and contains two CxxC motifs separated by 17 amino acids. One protein in this entry has been noted as a putative regulatory protein, designated FmdB. Most proteins in this entry have a C-terminal region containing highly degenerate sequence.

---

Homologous Structure Templates

Structure Templates Detected by BLAST

Original result of BLAST against Protein Data Bank

ID	Length	Definition	E-value
Query	189
2i13_A	190	Aart, A Six Finger Zinc Finger Designed To Recogniz		8e-25
1mey_C	87	Crystal Structure Of A Designed Zinc Finger Protein		3e-14
1ubd_C	124	Co-Crystal Structure Of Human Yy1 Zinc Finger Domai		3e-14
2dmd_A	96	Solution Structure Of The N-Terminal C2h2 Type Zinc		3e-14
1zaa_C	87	Zinc Finger-Dna Recognition: Crystal Structure Of A		3e-13
1a1f_A	90	Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc		3e-13
1a1h_A	90	Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		8e-13
1jk1_A	90	Zif268 D20a Mutant Bound To Wt Dna Site Length = 90		8e-13
1p47_A	87	Crystal Structure Of Tandem Zif268 Molecules Comple		1e-12
1aay_A	90	Zif268 Zinc Finger-Dna Complex Length = 90		1e-12
1a1i_A	90	Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac		1e-12
2gli_A	155	Five-Finger GliDNA COMPLEX Length = 155		2e-12
1g2f_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		8e-12
1g2d_C	90	Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX		8e-12
2rpc_A	155	Solution Structure Of The Tandem Zf-C2h2 Domains Fr		5e-11
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-10
2jp9_A	119	Structure Of The Wilms Tumor Suppressor Protein Zin		1e-10
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		3e-10
2kmk_A	82	Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length =		5e-09
2ebt_A	100	Solution Structure Of Three Tandem Repeats Of Zf-C2		6e-09
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		1e-08
1tf6_A	190	Co-crystal Structure Of Xenopus Tfiiia Zinc Finger		4e-05
2wbs_A	89	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-08
2wbu_A	90	Crystal Structure Of The Zinc Finger Domain Of Klf4		4e-08
1x6e_A	72	Solution Structures Of The C2h2 Type Zinc Finger Do		5e-08
1llm_C	88	Crystal Structure Of A Zif23-Gcn4 Chimera Bound To		9e-08
2lce_A	74	Chemical Shift Assignment Of Hr4436b From Homo Sapi		4e-07
2ee8_A	106	Solution Structure Of Three Zf-C2h2 Domains From Mo		5e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		7e-07
2csh_A	110	Solution Structure Of Tandem Repeat Of The Zf-C2h2		8e-07
2cot_A	77	Solution Structure Of The First And Second Zf-C2h2		5e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		8e-06
2dlq_A	124	Solution Structure Of The Tandem Four Zf-C2h2 Domai		1e-05
1f2i_G	73	Cocrystal Structure Of Selected Zinc Finger Dimer B		9e-06
2ct1_A	77	Solution Structure Of The Zinc Finger Domain Of Tra		1e-05
1tf3_A	92	Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures		2e-05
2yt9_A	95	Solution Structure Of C2h2 Type Zinc Finger Domain		4e-05
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		9e-05
2lt7_A	133	Solution Nmr Structure Of Kaiso Zinc Finger Dna Bin		2e-04
2epa_A	72	Solution Structure Of The First And Second Zf-C2h2		1e-04
3uk3_C	57	Crystal Structure Of Znf217 Bound To Dna Length = 5		1e-04
2ytr_A	46	Solution Structure Of The C2h2 Type Zinc Finger (Re		2e-04
1bbo_A	57	High-Resolution Solution Structure Of The Double Cy		3e-04
2eq2_A	46	Solution Structure Of The 16th C2h2 Type Zinc Finge		4e-04
2adr_A	60	Adr1 Dna-Binding Domain From Saccharomyces Cerevisi		5e-04

>pdb|2I13|A Chain A, Aart, A Six Finger Zinc Finger Designed To Recognize Ann Triplets Length = 190

Iteration: 1
 Score =  109 bits (273), Expect = 8e-25,   Method: Compositional matrix adjust.
 Identities = 61/165 (36%), Positives = 83/165 (50%), Gaps = 16/165 (9%)
Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
           LA H ++H+ E+P+KC  C + F     L  H  THTG KP+KC  C   F+    L  H
Sbjct: 37  LAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH 96
Query: 83  VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
            R                 HT EKP+ C  C  +  +L+ +R H R+HTGE+PY+C  C 
Sbjct: 97  QRT----------------HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECG 140
Query: 143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
            +      L  H R HTGEKPY C  C   F++ ++L  H+  HT
Sbjct: 141 KSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHT 185

>pdb|1MEY|C Chain C, Crystal Structure Of A Designed Zinc Finger Protein Bound To Dna Length = 87

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 34/82 (41%), Positives = 50/82 (60%)
Query: 105 EKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPY 164
           EKP+KC  C  +  + S ++ H R+HTGE+PY+C  C  +   +  L++H R HTGEKPY
Sbjct: 2   EKPYKCPECGKSFSQSSNLQKHQRTHTGEKPYKCPECGKSFSQSSDLQKHQRTHTGEKPY 61
Query: 165 ACDICHARFTQSNSLKSHRLIH 186
            C  C   F++S+ L  H+  H
Sbjct: 62  KCPECGKSFSRSDHLSRHQRTH 83

>pdb|1UBD|C Chain C, Co-Crystal Structure Of Human Yy1 Zinc Finger Domain Bound To The Adeno-Associated Virus P5 Initiator Element Length = 124

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 42/91 (46%), Positives = 55/91 (60%), Gaps = 5/91 (5%)
Query: 102 HTH-EKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIH 158
           HTH  + H C+ C  A VE SK++ H   HTGE+P+QC    C       F L+ H+RIH
Sbjct: 28  HTHGPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIH 87
Query: 159 TGEKPYAC--DICHARFTQSNSLKSHRLIHT 187
           TG++PY C  D C+ +F QS +LKSH L H 
Sbjct: 88  TGDRPYVCPFDGCNKKFAQSTNLKSHILTHA 118

>pdb|2DMD|A Chain A, Solution Structure Of The N-Terminal C2h2 Type Zinc-Binding Domain Of The Zinc Finger Protein 64, Isoforms 1 And 2 Length = 96

Iteration: 1
 Score = 74.7 bits (182), Expect = 3e-14,   Method: Compositional matrix adjust.
 Identities = 35/81 (43%), Positives = 47/81 (58%)
Query: 107 PHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           PHKC +C        K++ HMR HTG +PY+C  C YA+ D+  L +HLRIH+ E+P+ C
Sbjct: 8   PHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKC 67
Query: 167 DICHARFTQSNSLKSHRLIHT 187
            IC      S+ L  H   HT
Sbjct: 68  QICPYASRNSSQLTVHLRSHT 88

>pdb|1ZAA|C Chain C, Zinc Finger-Dna Recognition: Crystal Structure Of A Zif268- Dna Complex At 2.1 Angstroms Length = 87

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/85 (41%), Positives = 50/85 (58%), Gaps = 2/85 (2%)
Query: 104 HEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE 161
           HE+P+ C +  CD       ++  H+R HTG++P+QC  C      +  L  H+R HTGE
Sbjct: 1   HERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGE 60
Query: 162 KPYACDICHARFTQSNSLKSHRLIH 186
           KP+ACDIC  +F +S+  K H  IH
Sbjct: 61  KPFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1F|A Chain A, Dsnr (Zif268 Variant) Zinc Finger-Dna Complex (Gacc Site) Length = 90

Iteration: 1
 Score = 71.2 bits (173), Expect = 3e-13,   Method: Compositional matrix adjust.
 Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 105 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           E+P+ C +  CD    + S +  H+R HTG++P+QC  C      +  L  H+R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSDSSNLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 163 PYACDICHARFTQSNSLKSHRLIH 186
           P+ACDIC  +F +S+  K H  IH
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1H|A Chain A, Qgsr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 69.7 bits (169), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 105 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           E+P+ C +  CD    +   +  H+R HTG++P+QC  C      +  L  H+R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 163 PYACDICHARFTQSNSLKSHRLIH 186
           P+ACDIC  +F +S+  K H  IH
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1JK1|A Chain A, Zif268 D20a Mutant Bound To Wt Dna Site Length = 90

Iteration: 1
 Score = 69.7 bits (169), Expect = 8e-13,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 50/84 (59%), Gaps = 2/84 (2%)
Query: 105 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           E+P+ C +  CD      +++  H+R HTG++P+QC  C      +  L  H+R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSRSAELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 163 PYACDICHARFTQSNSLKSHRLIH 186
           P+ACDIC  +F +S+  K H  IH
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1P47|A Chain A, Crystal Structure Of Tandem Zif268 Molecules Complexed To Dna Length = 87

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 105 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           E+P+ C +  CD       ++  H+R HTG++P+QC  C      +  L  H+R HTGEK
Sbjct: 1   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 60
Query: 163 PYACDICHARFTQSNSLKSHRLIH 186
           P+ACDIC  +F +S+  K H  IH
Sbjct: 61  PFACDICGRKFARSDERKRHTKIH 84

>pdb|1AAY|A Chain A, Zif268 Zinc Finger-Dna Complex Length = 90

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 105 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           E+P+ C +  CD       ++  H+R HTG++P+QC  C      +  L  H+R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 163 PYACDICHARFTQSNSLKSHRLIH 186
           P+ACDIC  +F +S+  K H  IH
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|1A1I|A Chain A, Radr (Zif268 Variant) Zinc Finger-Dna Complex (Gcac Site) Length = 90

Iteration: 1
 Score = 69.3 bits (168), Expect = 1e-12,   Method: Compositional matrix adjust.
 Identities = 34/84 (40%), Positives = 49/84 (58%), Gaps = 2/84 (2%)
Query: 105 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           E+P+ C +  CD      + +  H+R HTG++P+QC  C      +  L  H+R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSRSADLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61
Query: 163 PYACDICHARFTQSNSLKSHRLIH 186
           P+ACDIC  +F +S+  K H  IH
Sbjct: 62  PFACDICGRKFARSDERKRHTKIH 85

>pdb|2GLI|A Chain A, Five-Finger GliDNA COMPLEX Length = 155

Iteration: 1
 Score = 68.9 bits (167), Expect = 2e-12,   Method: Compositional matrix adjust.
 Identities = 51/142 (35%), Positives = 72/142 (50%), Gaps = 29/142 (20%)
Query: 69  CESRFTTSGELVRHVRYKHTH-EKPE--------------------LVRHVRYKHTHEKP 107
           C   F +  +LV H+  +H H E+ E                    LV H+R +HT EKP
Sbjct: 9   CSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR-RHTGEKP 67
Query: 108 HKCSI--CDYASVELSKMRNHMRSHTGERPYQCAH--CTYA-SPDTFKLKRHLRIHTGEK 162
           HKC+   C  +   L  ++ H+RSHTGE+PY C H  C+ A S  + + K   R H+ EK
Sbjct: 68  HKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEK 127
Query: 163 PYACDI--CHARFTQSNSLKSH 182
           PY C +  C  R+T  +SL+ H
Sbjct: 128 PYVCKLPGCTKRYTDPSSLRKH 149

>pdb|1G2F|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (Tatazf;clone #6) Length = 90

Iteration: 1
 Score = 66.6 bits (161), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 47/84 (55%), Gaps = 2/84 (2%)
Query: 105 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           E+P+ C +  CD    + + +  H+R HTG++P+QC  C         L  H+R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQQASLNAHIRTHTGEK 61
Query: 163 PYACDICHARFTQSNSLKSHRLIH 186
           P+ACDIC  +F   ++   H  IH
Sbjct: 62  PFACDICGRKFATLHTRTRHTKIH 85

>pdb|1G2D|C Chain C, Structure Of A Cys2his2 Zinc FingerTATA BOX COMPLEX (CLONE #2) Length = 90

Iteration: 1
 Score = 66.6 bits (161), Expect = 8e-12,   Method: Compositional matrix adjust.
 Identities = 32/84 (38%), Positives = 48/84 (57%), Gaps = 2/84 (2%)
Query: 105 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           E+P+ C +  CD    + + +  H+R HTG++P+QC  C         L +H+R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSQKTNLDTHIRIHTGQKPFQCRICMRNFSQHTGLNQHIRTHTGEK 61
Query: 163 PYACDICHARFTQSNSLKSHRLIH 186
           P+ACDIC  +F   ++   H  IH
Sbjct: 62  PFACDICGRKFATLHTRDRHTKIH 85

>pdb|2RPC|A Chain A, Solution Structure Of The Tandem Zf-C2h2 Domains From The Human Zinc Finger Protein Zic 3 Length = 155

Iteration: 1
 Score = 63.9 bits (154), Expect = 5e-11,   Method: Compositional matrix adjust.
 Identities = 47/125 (37%), Positives = 60/125 (48%), Gaps = 11/125 (8%)
Query: 67  KYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNH 126
           K C+  F+T  ELV HV  +H    PE   HV Y     +  K     Y      K+ NH
Sbjct: 29  KSCDRTFSTMHELVTHVTMEHVG-GPEQNNHVCYWEECPREGKSFKAKY------KLVNH 81
Query: 127 MRSHTGERPYQC--AHCTYASPDTFKLKRHLRIHTGEKPYACDI--CHARFTQSNSLKSH 182
           +R HTGE+P+ C    C      +  LK H R HTGEKP+ C+   C  RF  S+  K H
Sbjct: 82  IRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKH 141
Query: 183 RLIHT 187
             +HT
Sbjct: 142 MHVHT 146

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 20/112 (17%)
Query: 31  SEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYK 86
           SE+RP  C+   C + +  ++ LQ H   HTG KP++C +  CE RF+ S +L RH R  
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR-- 59
Query: 87  HTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
                         +HT  KP +C  C         ++ H R+HTGE+P+ C
Sbjct: 60  --------------RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSC 97

>pdb|2JP9|A Chain A, Structure Of The Wilms Tumor Suppressor Protein Zinc Finger Domain Bound To Dna Length = 119

Iteration: 1
 Score = 62.8 bits (151), Expect = 1e-10,   Method: Compositional matrix adjust.
 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 4/89 (4%)
Query: 103 THEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQC--AHCTYASPDTFKLKRHLRIH 158
           + ++P  C+   C+    +LS ++ H R HTGE+PYQC    C      + +LKRH R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61
Query: 159 TGEKPYACDICHARFTQSNSLKSHRLIHT 187
           TG KP+ C  C  +F++S+ LK+H   HT
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHTRTHT 90

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 61.6 bits (148), Expect = 3e-10,   Method: Compositional matrix adjust.
 Identities = 32/95 (33%), Positives = 49/95 (51%), Gaps = 16/95 (16%)
Query: 38  CSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRH 97
           C +C + FK  ++L  H+  H+  +P+ C+YC  RF               H+K ++ +H
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRF---------------HQKSDMKKH 48
Query: 98  VRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTG 132
             + HT EKPHKC +C  A  + S +  H R HTG
Sbjct: 49  T-FIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>pdb|2KMK|A Chain A, Gfi-1 Zinc Fingers 3-5 Complexed With Dna Length = 82

Iteration: 1
 Score = 57.4 bits (137), Expect = 5e-09,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 42/78 (53%)
Query: 110 CSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC 169
           C IC  +    S +  H+  H+  RPY C +C         +K+H  IHTGEKP+ C +C
Sbjct: 4   CKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVC 63
Query: 170 HARFTQSNSLKSHRLIHT 187
              F+QS++L +H   HT
Sbjct: 64  GKAFSQSSNLITHSRKHT 81

>pdb|2EBT|A Chain A, Solution Structure Of Three Tandem Repeats Of Zf-C2h2 Domains From Human Kruppel-Like Factor 5 Length = 100

Iteration: 1
 Score = 57.0 bits (136), Expect = 6e-09,   Method: Compositional matrix adjust.
 Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 7/77 (9%)
Query: 113 CDYAS-----VELSKMRNHMRSHTGERPYQCA--HCTYASPDTFKLKRHLRIHTGEKPYA 165
           CDY        + S ++ H+R+HTGE+PY+C    C +    + +L RH R HTG KP+ 
Sbjct: 18  CDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQ 77
Query: 166 CDICHARFTQSNSLKSH 182
           C +C+  F++S+ L  H
Sbjct: 78  CGVCNRSFSRSDHLALH 94

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 55.8 bits (133), Expect = 1e-08,   Method: Compositional matrix adjust.
 Identities = 46/150 (30%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 17  YHVMYLLARHLKSHSEERPHKC--SVCERGFKTIASLQNHINTHTGVKPHKCKY--CESR 72
           Y+  + L  HL  H+ E+P  C    CE+GF ++  L  H  THTG K   C    C+ R
Sbjct: 24  YNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLR 83
Query: 73  FTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTG 132
           FTT   + +H    H  +    V H               C  A  + ++++ H  SHT 
Sbjct: 84  FTTKANMKKHFNRFHNIKICVYVCHFEN------------CGKAFKKHNQLKVHQFSHTQ 131
Query: 133 ERPYQCAH--CTYASPDTFKLKRHLRIHTG 160
           + PY+C H  C        +LKRH ++H G
Sbjct: 132 QLPYECPHEGCDKRFSLPSRLKRHEKVHAG 161

>pdb|1TF6|A Chain A, Co-crystal Structure Of Xenopus Tfiiia Zinc Finger Domain Bound To The 5s Ribosomal Rna Gene Internal Control Region Length = 190

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 112 ICDYASVELS-----KMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEKPY 164
           IC +A    +     K++ H+  HTGE+P+ C    C         L RH   HTGEK +
Sbjct: 14  ICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNF 73
Query: 165 ACDI--CHARFTQSNSLKSH 182
            CD   C  RFT   ++K H
Sbjct: 74  TCDSDGCDLRFTTKANMKKH 93

>pdb|2WBS|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 89

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 112 ICDYAS-----VELSKMRNHMRSHTGERPYQCA--HCTYASPDTFKLKRHLRIHTGEKPY 164
            CDYA       + S ++ H+R+HTGE+PY C    C +    + +L RH R HTG +P+
Sbjct: 7   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 66
Query: 165 ACDICHARFTQSNSLKSH 182
            C  C   F++S+ L  H
Sbjct: 67  QCQKCDRAFSRSDHLALH 84

>pdb|2WBU|A Chain A, Crystal Structure Of The Zinc Finger Domain Of Klf4 Bound To Its Target Dna Length = 90

Iteration: 1
 Score = 54.3 bits (129), Expect = 4e-08,   Method: Compositional matrix adjust.
 Identities = 29/78 (37%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 112 ICDYAS-----VELSKMRNHMRSHTGERPYQCA--HCTYASPDTFKLKRHLRIHTGEKPY 164
            CDYA       + S ++ H+R+HTGE+PY C    C +    + +L RH R HTG +P+
Sbjct: 8   TCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPF 67
Query: 165 ACDICHARFTQSNSLKSH 182
            C  C   F++S+ L  H
Sbjct: 68  QCQKCDRAFSRSDHLALH 85

>pdb|1X6E|A Chain A, Solution Structures Of The C2h2 Type Zinc Finger Domain Of Human Zinc Finger Protein 24 Length = 72

Iteration: 1
 Score = 53.9 bits (128), Expect = 5e-08,   Method: Compositional matrix adjust.
 Identities = 25/55 (45%), Positives = 34/55 (61%)
Query: 133 ERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           E+PY C  C  A   +  L +H R+HTGEKPY C  C   F+Q++ L +H+ IHT
Sbjct: 12  EKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHT 66

>pdb|1LLM|C Chain C, Crystal Structure Of A Zif23-Gcn4 Chimera Bound To Dna Length = 88

Iteration: 1
 Score = 53.1 bits (126), Expect = 9e-08,   Method: Compositional matrix adjust.
 Identities = 24/53 (45%), Positives = 32/53 (60%)
Query: 134 RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIH 186
           +P+QC  C      +  L  H+R HTGEKP+ACDIC  +F +S+  K HR I 
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQ 54

>pdb|2LCE|A Chain A, Chemical Shift Assignment Of Hr4436b From Homo Sapiens, Northeast Structural Genomics Consortium Length = 74

Iteration: 1
 Score = 51.2 bits (121), Expect = 4e-07,   Method: Compositional matrix adjust.
 Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 133 ERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           ++PY+C  C  +      L  H  +HTGEKPY C+IC A+F +  +LK+H  IH+
Sbjct: 15  DKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS 69

>pdb|2EE8|A Chain A, Solution Structure Of Three Zf-C2h2 Domains From Mouse Protein Odd-Skipped-Related 2 Splicing Isoform 2 Length = 106

Iteration: 1
 Score = 50.8 bits (120), Expect = 5e-07,   Method: Compositional matrix adjust.
 Identities = 30/78 (38%), Positives = 39/78 (50%), Gaps = 3/78 (3%)
Query: 112 ICDYASVELSKMRN---HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI 168
           IC +     +K  N   H R+HT ERPY C  C  A      L+ H  IH+ EKP+ C  
Sbjct: 19  ICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQE 78
Query: 169 CHARFTQSNSLKSHRLIH 186
           C   F QS +L  H+ +H
Sbjct: 79  CGKGFCQSRTLAVHKTLH 96

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 50.1 bits (118), Expect = 7e-07,   Method: Compositional matrix adjust.
 Identities = 24/59 (40%), Positives = 31/59 (52%)
Query: 25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHV 83
          RH+  H   RP+ C VC + FK    L  H+  HTG+KP++C  C  RF       RHV
Sbjct: 27 RHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV 85

>pdb|2CSH|A Chain A, Solution Structure Of Tandem Repeat Of The Zf-C2h2 Domains Of Human Zinc Finger Protein 297b Length = 110

Iteration: 1
 Score = 50.1 bits (118), Expect = 8e-07,   Method: Compositional matrix adjust.
 Identities = 30/74 (40%), Positives = 36/74 (48%), Gaps = 8/74 (10%)
Query: 113 CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHL----RIHTGEKPYACDI 168
           C  +    S+   HM  H G RPY C  C       FK+K HL    +IHTG KPY C+I
Sbjct: 15  CGKSFTHKSQRDRHMSMHLGLRPYGCGVCG----KKFKMKHHLVGHMKIHTGIKPYECNI 70
Query: 169 CHARFTQSNSLKSH 182
           C  RF   +S   H
Sbjct: 71  CAKRFMWRDSFHRH 84

>pdb|2COT|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domain Of Zinc Finger Protein 435 Length = 77

Iteration: 1
 Score = 47.4 bits (111), Expect = 5e-06,   Method: Compositional matrix adjust.
 Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 134 RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           R Y+C  C  +   +  L +H R HTGEKPY CD C   F Q + L  H  +HT
Sbjct: 17  RRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHT 70

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 46.6 bits (109), Expect = 8e-06,   Method: Compositional matrix adjust.
 Identities = 35/125 (28%), Positives = 56/125 (44%), Gaps = 14/125 (11%)
Query: 37  KCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVR 96
           +C  C + F +   L+ H   HTG KP +C  C   +     L+ H   ++   + E V 
Sbjct: 9   ECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEH-EARNCMNRSEQV- 66
Query: 97  HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHL- 155
                        CS+C        ++R HM SHTGE PY+C+ C+        L+ H+ 
Sbjct: 67  -----------FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMI 115
Query: 156 RIHTG 160
           ++H+G
Sbjct: 116 KLHSG 120

>pdb|2DLQ|A Chain A, Solution Structure Of The Tandem Four Zf-C2h2 Domain Repeats Of Murine Gli-Kruppel Family Member Hkr3 Length = 124

Iteration: 1
 Score = 46.2 bits (108), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 5/88 (5%)
Query: 101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIH-- 158
           KHT EKP +C  C         +  H   +   R  Q   C+    +TF+ +  LR+H  
Sbjct: 29  KHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQ-ETFRRRMELRLHMV 87
Query: 159 --TGEKPYACDICHARFTQSNSLKSHRL 184
             TGE PY C  C  +F Q   L+SH +
Sbjct: 88  SHTGEMPYKCSSCSQQFMQKKDLQSHMI 115

>pdb|1F2I|G Chain G, Cocrystal Structure Of Selected Zinc Finger Dimer Bound To Dna Length = 73

Iteration: 1
 Score = 46.6 bits (109), Expect = 9e-06,   Method: Compositional matrix adjust.
 Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 2/56 (3%)
Query: 134 RPYQCA--HCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           RPY C    C      + +L RH+RIHTG+KP+ C IC   F++S+ L +H   HT
Sbjct: 18  RPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>pdb|2CT1|A Chain A, Solution Structure Of The Zinc Finger Domain Of Transcriptional Repressor Ctcf Protein Length = 77

Iteration: 1
 Score = 45.8 bits (107), Expect = 1e-05,   Method: Compositional matrix adjust.
 Identities = 20/29 (68%), Positives = 23/29 (79%)
Query: 156 RIHTGEKPYACDICHARFTQSNSLKSHRL 184
           R H+GEKPY C ICHARFTQS ++K H L
Sbjct: 8   RTHSGEKPYECYICHARFTQSGTMKMHIL 36

>pdb|1TF3|A Chain A, Tfiiia Finger 1-3 Bound To Dna, Nmr, 22 Structures Length = 92

Iteration: 1
 Score = 45.8 bits (107), Expect = 2e-05,   Method: Compositional matrix adjust.
 Identities = 28/80 (35%), Positives = 38/80 (47%), Gaps = 9/80 (11%)
Query: 112 ICDYASVELS-----KMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEKPY 164
           IC +A    +     K++ H+  HTGE+P+ C    C         L RH   HTGEK +
Sbjct: 5   ICSFADCGAAYNKNWKLQAHLSKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNF 64
Query: 165 ACDI--CHARFTQSNSLKSH 182
            CD   C  RFT   ++K H
Sbjct: 65  TCDSDGCDLRFTTKANMKKH 84

>pdb|2YT9|A Chain A, Solution Structure Of C2h2 Type Zinc Finger Domain 345 In Zinc Finger Protein 278 Length = 95

Iteration: 1
 Score = 44.3 bits (103), Expect = 4e-05,   Method: Compositional matrix adjust.
 Identities = 24/75 (32%), Positives = 35/75 (46%), Gaps = 2/75 (2%)
Query: 110 CSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE--KPYACD 167
           C IC     ++  +  H  SH+GE+PY C  C        ++  H+R H G   KPY C 
Sbjct: 10  CEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQ 69
Query: 168 ICHARFTQSNSLKSH 182
            C   F++ + L  H
Sbjct: 70  SCGKGFSRPDHLNGH 84

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 43.1 bits (100), Expect = 9e-05,   Method: Compositional matrix adjust.
 Identities = 27/98 (27%), Positives = 45/98 (45%), Gaps = 16/98 (16%)
Query: 38  CSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRH 97
           C VC+R +  + SL+ H N H+  K + C+YCE  F  +        Y+  HE       
Sbjct: 25  CIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLA-------EYRTKHE------- 70
Query: 98  VRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERP 135
               HT E+ ++C  C  + +    M +H++S   + P
Sbjct: 71  --IHHTGERRYQCLACGKSFINYQFMSSHIKSVHSQDP 106

>pdb|2LT7|A Chain A, Solution Nmr Structure Of Kaiso Zinc Finger Dna Binding Domain In Complex With Kaiso Binding Site Dna Length = 133

Iteration: 1
 Score = 41.6 bits (96), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 23/73 (31%), Positives = 33/73 (45%)
Query: 110 CSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC 169
           C +C  + V L+ +R H   H+ E+ Y C +C    P      +H   HTGE+ Y C  C
Sbjct: 25  CIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQCLAC 84
Query: 170 HARFTQSNSLKSH 182
              F     + SH
Sbjct: 85  GKSFINYQFMSSH 97

>pdb|2EPA|A Chain A, Solution Structure Of The First And Second Zf-C2h2 Domains From Human Krueppel-Like Factor 10 Length = 72

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 27/71 (38%), Positives = 38/71 (53%), Gaps = 10/71 (14%)
Query: 118 VELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI--CHARFTQ 175
           ++ S++R+H+ SH G     C    + S     LK H R HTGEKP++C    C  RF +
Sbjct: 10  IDSSRIRSHICSHPG-----CGKTYFKSSH---LKAHTRTHTGEKPFSCSWKGCERRFAR 61
Query: 176 SNSLKSHRLIH 186
           S+ L  HR  H
Sbjct: 62  SDELSRHRRTH 72

>pdb|3UK3|C Chain C, Crystal Structure Of Znf217 Bound To Dna Length = 57

Iteration: 1
 Score = 42.4 bits (98), Expect = 1e-04,   Method: Compositional matrix adjust.
 Identities = 20/51 (39%), Positives = 26/51 (50%)
Query: 132 GERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSH 182
           G    +C++C       + L  HLR HTGEKPY C+ C     Q  SL+ H
Sbjct: 1   GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYH 51

>pdb|2YTR|A Chain A, Solution Structure Of The C2h2 Type Zinc Finger (Region 760- 792) Of Human Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 42.0 bits (97), Expect = 2e-04,   Method: Compositional matrix adjust.
 Identities = 19/33 (57%), Positives = 21/33 (63%)
Query: 133 ERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYA 165
           E+PY+C  C  A   T KL RH RIHTGEKP  
Sbjct: 10  EKPYKCNECGKAFSQTSKLARHQRIHTGEKPSG 42

>pdb|1BBO|A Chain A, High-Resolution Solution Structure Of The Double Cys2His2 Zinc Finger From The Human Enhancer Binding Protein Mbp-1 Length = 57

Iteration: 1
 Score = 41.6 bits (96), Expect = 3e-04,   Method: Compositional matrix adjust.
 Identities = 20/49 (40%), Positives = 27/49 (55%)
Query: 38 CSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYK 86
          C  C    K  + L+ HI THT V+P+ C YC   F T G L +H++ K
Sbjct: 4  CEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSK 52

>pdb|2EQ2|A Chain A, Solution Structure Of The 16th C2h2 Type Zinc Finger Domain Of Zinc Finger Protein 347 Length = 46

Iteration: 1
 Score = 41.2 bits (95), Expect = 4e-04,   Method: Compositional matrix adjust.
 Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 134 RPYQCAHCTYASPDTFKLKRHLRIHTGEKP 163
           +PYQC  C  A   T KL RH R+HTGEKP
Sbjct: 11  KPYQCNECGKAFSQTSKLARHQRVHTGEKP 40

>pdb|2ADR|A Chain A, Adr1 Dna-Binding Domain From Saccharomyces Cerevisiae, Nmr, 25 Structures Length = 60

Iteration: 1
 Score = 40.8 bits (94), Expect = 5e-04,   Method: Compositional matrix adjust.
 Identities = 21/47 (44%), Positives = 26/47 (55%)
Query: 136 YQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSH 182
           + C  CT A      LKRH R HT EKPY C +C+  FT+ + L  H
Sbjct: 3   FVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRH 49

Structure Templates Detected by RPS-BLAST

Original result of RPS-BLAST against PDB70 database

ID	Length	Definition	E-value
Query	189
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-37
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	2e-37
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	6e-30
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	3e-29
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	4e-16
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	1e-31
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	9e-15
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	9e-30
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	2e-27
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	1e-17
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	4e-07
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	1e-28
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	4e-14
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	6e-07
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-27
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	7e-27
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	2e-15
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	8e-27
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	2e-26
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	5e-25
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	1e-13
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	9e-27
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-22
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-21
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	2e-15
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	2e-25
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-24
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	1e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	6e-24
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-18
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	2e-17
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	9e-14
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	4e-23
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	2e-22
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	6e-20
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	3e-18
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	7e-23
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-20
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	1e-14
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	3e-13
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	2e-07
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	1e-20
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-14
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-10
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	2e-10
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	3e-20
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	2e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	9e-12
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	1e-09
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	5e-20
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	2e-16
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	8e-13
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	6e-12
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	7e-20
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-19
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	6e-15
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	4e-13
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	1e-04
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	6e-19
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	8e-16
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	1e-15
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	2e-10
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	6e-18
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-17
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	7e-16
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	2e-15
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	9e-18
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	8e-16
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	2e-13
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	1e-12
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	7e-05
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-17
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	5e-12
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-11
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	1e-10
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	2e-10
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-16
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	2e-16
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	1e-11
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-09
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	9e-05
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-16
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	2e-15
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-12
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	1e-11
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	6e-05
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	4e-16
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	2e-13
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	3e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	4e-16
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	1e-15
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	2e-11
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	3e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	2e-15
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	6e-14
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	3e-12
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-09
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	1e-06
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	8e-15
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-11
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	1e-10
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-13
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	1e-09
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	2e-07
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	6e-04
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	1e-11
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	2e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	3e-09
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	4e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-11
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	5e-08
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	6e-06
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-05
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	2e-05
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-11
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2epa_A	72	Krueppel-like factor 10; transforming growth facto	3e-11
2epa_A	72	Krueppel-like factor 10; transforming growth facto	5e-10
2epa_A	72	Krueppel-like factor 10; transforming growth facto	6e-07
2epa_A	72	Krueppel-like factor 10; transforming growth facto	8e-04
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-11
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-08
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-05
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-11
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-07
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-06
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	4e-11
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	1e-07
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	4e-11
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-09
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	6e-08
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-06
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	3e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-11
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-07
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-11
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-08
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	5e-11
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	1e-07
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	2e-06
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	3e-05
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	4e-05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-11
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-08
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-04
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-11
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-08
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-05
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-11
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-08
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-07
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-11
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-07
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-06
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-11
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-11
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-06
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-11
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	7e-07
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	5e-06
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-04
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-11
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	7e-11
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-07
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-06
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-04
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	7e-11
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-05
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-11
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-08
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-11
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-07
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-11
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-08
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-06
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-04
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-11
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-07
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-11
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-11
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-07
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-06
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-05
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-05
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-11
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-08
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-06
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	9e-11
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-08
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-07
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-06
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-05
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-11
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-06
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-05
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	9e-11
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-08
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-11
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	9e-08
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-06
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-08
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-08
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-07
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-05
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-08
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-07
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	3e-06
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	1e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	4e-10
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	2e-05
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-10
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	8e-05
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-10
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-10
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	5e-08
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	9e-07
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-04
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-10
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-09
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	2e-07
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	1e-06
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	8e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-08
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	5e-05
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-10
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	1e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	2e-07
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	7e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-10
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-08
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	6e-05
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-10
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	6e-07
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-05
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-10
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-08
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-05
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-06
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-10
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	8e-08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-07
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	7e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	4e-07
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	4e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-06
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-04
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	8e-07
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-04
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-05
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-07
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-10
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	2e-08
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	5e-07
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	1e-05
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	7e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-07
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-10
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	4e-08
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	9e-07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	2e-06
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	8e-05
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-05
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-10
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-08
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-05
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	2e-10
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	5e-08
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-07
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	6e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-07
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	6e-05
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-10
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-08
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	6e-05
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-10
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-09
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-07
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-06
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-05
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-10
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-08
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-06
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-10
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-07
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	1e-04
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	9e-09
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-07
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	8e-05
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	3e-10
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	5e-07
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	2e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	4e-06
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	1e-05
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-10
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-06
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-05
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-10
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	5e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	9e-07
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	3e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	8e-06
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-05
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-10
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-08
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	2e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	3e-06
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	1e-04
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-10
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	5e-07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	4e-06
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-05
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-08
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	6e-06
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-05
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	3e-10
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	1e-09
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	5e-06
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	2e-05
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-10
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	1e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	3e-07
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-06
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	4e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	3e-10
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	6e-08
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	1e-05
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	4e-04
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	7e-04
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-08
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	9e-05
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-10
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-08
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-10
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	3e-06
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	4e-05
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-04
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	4e-10
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-07
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-06
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	2e-05
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-10
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	1e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	4e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	8e-07
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	2e-05
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-10
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	8e-09
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	2e-06
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	9e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	5e-10
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-07
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-06
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	2e-05
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	1e-04
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	5e-10
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-08
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	2e-04
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	6e-10
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	1e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	2e-06
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	3e-05
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	6e-10
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	1e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-07
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	7e-06
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	2e-04
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	7e-10
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-05
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	8e-10
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	2e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	6e-07
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	3e-05
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	1e-04
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	9e-10
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	2e-06
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	7e-05
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-09
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	5e-07
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	4e-06
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-05
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	2e-09
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	9e-07
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	6e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	9e-06
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	8e-05
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	2e-09
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	6e-07
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	3e-06
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	1e-04
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	6e-09
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	8e-08
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-06
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	1e-05
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	3e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	6e-09
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	1e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	9e-05
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	3e-04
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	9e-09
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	2e-07
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	4e-04
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	1e-08
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	3e-06
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	6e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-08
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-06
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	7e-05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	1e-04
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	3e-04
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	5e-08
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	4e-07
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	7e-06
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	3e-05
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	1e-04
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	3e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	5e-07
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	2e-06
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	9e-07
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	2e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	2e-06
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	5e-05
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	1e-04
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	5e-06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	3e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	6e-05
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	4e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	2e-04
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1} Len	3e-04
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	7e-04

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  127 bits (321), Expect = 2e-37
 Identities = 61/165 (36%), Positives = 83/165 (50%), Gaps = 16/165 (9%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
           LA H ++H+ E+P+KC  C + F     L  H  THTG KP+KC  C   F+    L  H
Sbjct: 37  LAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAH 96

Query: 83  VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
            R                 HT EKP+ C  C  +  +L+ +R H R+HTGE+PY+C  C 
Sbjct: 97  QR----------------THTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECG 140

Query: 143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
            +      L  H R HTGEKPY C  C   F++ ++L  H+  HT
Sbjct: 141 KSFSREDNLHTHQRTHTGEKPYKCPECGKSFSRRDALNVHQRTHT 185

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  126 bits (320), Expect = 2e-37
 Identities = 57/165 (34%), Positives = 78/165 (47%), Gaps = 16/165 (9%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
                     E+P+ C  C + F     L  H  THTG KP+KC  C   F+   +L RH
Sbjct: 9   SVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRH 68

Query: 83  VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
            R                 HT EKP+KC  C  +  + + +R H R+HTGE+PY C  C 
Sbjct: 69  QR----------------THTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECG 112

Query: 143 YASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
            +      L+ H R HTGEKPY C  C   F++ ++L +H+  HT
Sbjct: 113 KSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHT 157

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  107 bits (271), Expect = 6e-30
 Identities = 48/138 (34%), Positives = 63/138 (45%), Gaps = 16/138 (11%)

Query: 50  SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHK 109
           S         G KP+ C  C   F+ S  L  H R                 HT EKP+K
Sbjct: 8   SSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRT----------------HTGEKPYK 51

Query: 110 CSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC 169
           C  C  +  +   +  H R+HTGE+PY+C  C  +      L+ H R HTGEKPYAC  C
Sbjct: 52  CPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPEC 111

Query: 170 HARFTQSNSLKSHRLIHT 187
              F+Q   L++H+  HT
Sbjct: 112 GKSFSQLAHLRAHQRTHT 129

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score =  105 bits (266), Expect = 3e-29
 Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 16/141 (11%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
           L RH ++H+ E+P+KC  C + F   A+L+ H  THTG KP+ C  C   F+    L  H
Sbjct: 65  LTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAH 124

Query: 83  VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
            R                 HT EKP+KC  C  +      +  H R+HTGE+PY+C  C 
Sbjct: 125 QR----------------THTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYKCPECG 168

Query: 143 YASPDTFKLKRHLRIHTGEKP 163
            +      L  H R HTG+K 
Sbjct: 169 KSFSRRDALNVHQRTHTGKKT 189

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C* Length = 190

 Score = 71.7 bits (177), Expect = 4e-16
 Identities = 24/67 (35%), Positives = 29/67 (43%)

Query: 121 SKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK 180
           S          GE+PY C  C  +   +  L  H R HTGEKPY C  C   F+    L 
Sbjct: 7   SSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLT 66

Query: 181 SHRLIHT 187
            H+  HT
Sbjct: 67  RHQRTHT 73

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score =  111 bits (279), Expect = 1e-31
 Identities = 52/170 (30%), Positives = 74/170 (43%), Gaps = 31/170 (18%)

Query: 33  ERPHKCSVCERGFKTIASLQNHINT---HTGVKPHKCKYCESR-----FTTSGELVRHVR 84
           E   +   C + F +   L +HIN+   H   K   C +         F     LV H+R
Sbjct: 1   ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMR 60

Query: 85  YKHTHEKPELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAH-- 140
                           +HT EKPHKC+   C  +   L  ++ H+RSHTGE+PY C H  
Sbjct: 61  ----------------RHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEG 104

Query: 141 CTYASPDTFKLKRH-LRIHTGEKPYACDI--CHARFTQSNSLKSHRLIHT 187
           C+ A  +     +H  R H+ EKPY C +  C  R+T  +SL+ H     
Sbjct: 105 CSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVH 154

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 155

 Score = 67.2 bits (165), Expect = 9e-15
 Identities = 32/118 (27%), Positives = 61/118 (51%), Gaps = 21/118 (17%)

Query: 21  YLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTS 76
           Y+L  H++ H+ E+PHKC+   C + +  + +L+ H+ +HTG KP+ C++  C   F+ +
Sbjct: 53  YMLVVHMRRHTGEKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNA 112

Query: 77  GELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTG 132
            +  +H                R  H++EKP+ C +  C     + S +R H+++  G
Sbjct: 113 SDRAKH--------------QNR-THSNEKPYVCKLPGCTKRYTDPSSLRKHVKTVHG 155

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  106 bits (266), Expect = 9e-30
 Identities = 45/151 (29%), Positives = 60/151 (39%), Gaps = 11/151 (7%)

Query: 41  CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRY 100
                + I    +             K C+  F+T  ELV HV        PE   HV  
Sbjct: 3   SGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVT-MEHVGGPEQNNHV-- 59

Query: 101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIH 158
                   +C     +     K+ NH+R HTGE+P+ C    C      +  LK H R H
Sbjct: 60  ----CYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCPFPGCGKIFARSENLKIHKRTH 115

Query: 159 TGEKPYACDI--CHARFTQSNSLKSHRLIHT 187
           TGEKP+ C+   C  RF  S+  K H  +HT
Sbjct: 116 TGEKPFKCEFEGCDRRFANSSDRKKHMHVHT 146

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score =  100 bits (250), Expect = 2e-27
 Identities = 34/156 (21%), Positives = 53/156 (33%), Gaps = 29/156 (18%)

Query: 25  RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHK---------CKYCESRFTT 75
                   +       C+R F T+  L  H+       P +         C      F  
Sbjct: 15  SCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKA 74

Query: 76  SGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGE 133
             +LV H+R                 HT EKP  C    C         ++ H R+HTGE
Sbjct: 75  KYKLVNHIR----------------VHTGEKPFPCPFPGCGKIFARSENLKIHKRTHTGE 118

Query: 134 RPYQCAH--CTYASPDTFKLKRHLRIHTGEKPYACD 167
           +P++C    C     ++   K+H+ +HT +K     
Sbjct: 119 KPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS 154

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 74.6 bits (184), Expect = 1e-17
 Identities = 37/135 (27%), Positives = 46/135 (34%), Gaps = 29/135 (21%)

Query: 17  YHVMYLLARHLKSHSEERPHK---------CSVCERGFKTIASLQNHINTHTGVKPHKCK 67
           +  M+ L  H+       P +         C    + FK    L NHI  HTG KP  C 
Sbjct: 35  FSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPCP 94

Query: 68  Y--CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSI--CDYASVELSKM 123
           +  C   F  S  L  H R                 HT EKP KC    CD      S  
Sbjct: 95  FPGCGKIFARSENLKIHKR----------------THTGEKPFKCEFEGCDRRFANSSDR 138

Query: 124 RNHMRSHTGERPYQC 138
           + HM  HT ++    
Sbjct: 139 KKHMHVHTSDKSGPS 153

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens} Length = 155

 Score = 46.5 bits (111), Expect = 4e-07
 Identities = 5/49 (10%), Positives = 12/49 (24%)

Query: 139 AHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                +     +      I   +       C   F+  + L +H  +  
Sbjct: 1   GSSGSSGQPIKQELSCKWIDEAQLSRPKKSCDRTFSTMHELVTHVTMEH 49

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score =  104 bits (261), Expect = 1e-28
 Identities = 48/174 (27%), Positives = 63/174 (36%), Gaps = 28/174 (16%)

Query: 26  HLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVR 81
                   + + CS   C   +     LQ H+  HTG KP  CK   CE  FT+   L R
Sbjct: 3   EKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTR 62

Query: 82  HVRYKHTHEKPELVRHVRYKHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGER--PYQ 137
           H                   HT EK   C    CD      + M+ H       +   Y 
Sbjct: 63  HSLT----------------HTGEKNFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYV 106

Query: 138 C--AHCTYASPDTFKLKRHLRIHTGEKPYAC--DICHARFTQSNSLKSHRLIHT 187
           C   +C  A     +LK H   HT + PY C  + C  RF+  + LK H  +H 
Sbjct: 107 CHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 160

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 66.5 bits (163), Expect = 4e-14
 Identities = 24/67 (35%), Positives = 29/67 (43%), Gaps = 4/67 (5%)

Query: 125 NHMRSHTGERPYQC--AHCTYASPDTFKLKRHLRIHTGEKPYACD--ICHARFTQSNSLK 180
                    + Y C  A C  A    +KL+ HL  HTGEKP+ C    C   FT  + L 
Sbjct: 2   GEKALPVVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLT 61

Query: 181 SHRLIHT 187
            H L HT
Sbjct: 62  RHSLTHT 68

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A Length = 190

 Score = 46.4 bits (111), Expect = 6e-07
 Identities = 18/68 (26%), Positives = 29/68 (42%), Gaps = 2/68 (2%)

Query: 23  LARHLKSHSEERPHKCS--VCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           L  H  SH+++ P++C    C++ F   + L+ H   H G    K   C     T    +
Sbjct: 122 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 181

Query: 81  RHVRYKHT 88
           +HV   H 
Sbjct: 182 KHVAECHQ 189

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 98.0 bits (245), Expect = 7e-27
 Identities = 35/134 (26%), Positives = 55/134 (41%), Gaps = 14/134 (10%)

Query: 30  HSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTH 89
            S     +C  C + F +   L+ H   HTG KP +C  C   +     L+ H       
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM- 60

Query: 90  EKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTF 149
                       +  E+   CS+C        ++R HM SHTGE PY+C+ C+       
Sbjct: 61  ------------NRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKK 108

Query: 150 KLKRH-LRIHTGEK 162
            L+ H +++H+G  
Sbjct: 109 DLQSHMIKLHSGPS 122

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 98.0 bits (245), Expect = 7e-27
 Identities = 35/134 (26%), Positives = 53/134 (39%), Gaps = 20/134 (14%)

Query: 58  HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYAS 117
            +G    +C  C  +F +   L  H R                KHT EKP +C  C    
Sbjct: 2   SSGSSGVECPTCHKKFLSKYYLKVHNR----------------KHTGEKPFECPKCGKCY 45

Query: 118 VELSKMRNHMRS---HTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFT 174
                +  H      +  E+ + C+ C        +L+ H+  HTGE PY C  C  +F 
Sbjct: 46  FRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFM 105

Query: 175 QSNSLKSHRL-IHT 187
           Q   L+SH + +H+
Sbjct: 106 QKKDLQSHMIKLHS 119

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 Length = 124

 Score = 67.9 bits (167), Expect = 2e-15
 Identities = 27/116 (23%), Positives = 46/116 (39%), Gaps = 20/116 (17%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNH---INTHTGVKPHKCKYCESRFTTSGEL 79
           L  H + H+ E+P +C  C + +    +L  H      +   +   C  C+  F    EL
Sbjct: 23  LKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQVFTCSVCQETFRRRMEL 82

Query: 80  VRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHM-RSHTGER 134
             H+                  HT E P+KCS C    ++   +++HM + H+G  
Sbjct: 83  RLHMV----------------SHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS 122

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 96.7 bits (242), Expect = 8e-27
 Identities = 38/110 (34%), Positives = 56/110 (50%), Gaps = 16/110 (14%)

Query: 57  THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYA 116
           +     PHKC+ C   F+   +L  H+R                 HT  KP+KC  CDYA
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRC----------------HTGVKPYKCKTCDYA 45

Query: 117 SVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           + + S +  H+R H+ ERP++C  C YAS ++ +L  HLR HTG+   + 
Sbjct: 46  AADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSS 95

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 96.0 bits (240), Expect = 2e-26
 Identities = 35/86 (40%), Positives = 47/86 (54%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE 161
                PHKC +C        K++ HMR HTG +PY+C  C YA+ D+  L +HLRIH+ E
Sbjct: 3   SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDE 62

Query: 162 KPYACDICHARFTQSNSLKSHRLIHT 187
           +P+ C IC      S+ L  H   HT
Sbjct: 63  RPFKCQICPYASRNSSQLTVHLRSHT 88

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 92.1 bits (230), Expect = 5e-25
 Identities = 41/111 (36%), Positives = 54/111 (48%), Gaps = 16/111 (14%)

Query: 29  SHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHT 88
           S     PHKC VC + F     L+ H+  HTGVKP+KCK C+     S  L +H+R    
Sbjct: 2   SSGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLR---- 57

Query: 89  HEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCA 139
                        H+ E+P KC IC YAS   S++  H+RSHTG+      
Sbjct: 58  ------------IHSDERPFKCQICPYASRNSSQLTVHLRSHTGDSGPSSG 96

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 96

 Score = 62.8 bits (154), Expect = 1e-13
 Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
          L  H++ H+  +P+KC  C+      +SL  H+  H+  +P KC+ C      S +L  H
Sbjct: 24 LKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTVH 83

Query: 83 VRYKHTHEKP 92
          +R  HT +  
Sbjct: 84 LR-SHTGDSG 92

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 97.2 bits (243), Expect = 9e-27
 Identities = 42/134 (31%), Positives = 60/134 (44%), Gaps = 22/134 (16%)

Query: 59  TGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSI--CD 114
           +  +P  C Y  C  R+     L  H R                KHT EKP++C    C+
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSR----------------KHTGEKPYQCDFKDCE 45

Query: 115 YASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI--CHAR 172
                  +++ H R HTG +P+QC  C      +  LK H R HTGEKP++C    C  +
Sbjct: 46  RRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKK 105

Query: 173 FTQSNSLKSHRLIH 186
           F +S+ L  H  +H
Sbjct: 106 FARSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 86.0 bits (214), Expect = 2e-22
 Identities = 41/132 (31%), Positives = 62/132 (46%), Gaps = 22/132 (16%)

Query: 33  ERPHKCS--VCERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHT 88
           +RP  C+   C + +  ++ LQ H   HTG KP++C +  CE RF+ S +L RH R    
Sbjct: 4   KRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQR---- 59

Query: 89  HEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC--AHCTYASP 146
                       +HT  KP +C  C         ++ H R+HTGE+P+ C    C     
Sbjct: 60  ------------RHTGVKPFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFA 107

Query: 147 DTFKLKRHLRIH 158
            + +L RH  +H
Sbjct: 108 RSDELVRHHNMH 119

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 83.7 bits (208), Expect = 2e-21
 Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 4/89 (4%)

Query: 103 THEKPHKCS--ICDYASVELSKMRNHMRSHTGERPYQC--AHCTYASPDTFKLKRHLRIH 158
           + ++P  C+   C+    +LS ++ H R HTGE+PYQC    C      + +LKRH R H
Sbjct: 2   SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRH 61

Query: 159 TGEKPYACDICHARFTQSNSLKSHRLIHT 187
           TG KP+ C  C  +F++S+ LK+H   HT
Sbjct: 62  TGVKPFQCKTCQRKFSRSDHLKTHTRTHT 90

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A* Length = 119

 Score = 67.9 bits (167), Expect = 2e-15
 Identities = 35/112 (31%), Positives = 47/112 (41%), Gaps = 20/112 (17%)

Query: 23  LARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
           L  H + H+ E+P++C    CER F     L+ H   HTGVKP +CK C+ +F+ S  L 
Sbjct: 24  LQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVKPFQCKTCQRKFSRSDHLK 83

Query: 81  RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSH 130
            H R                 HT EKP  C    C        ++  H   H
Sbjct: 84  THTR----------------THTGEKPFSCRWPSCQKKFARSDELVRHHNMH 119

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 94.5 bits (236), Expect = 2e-25
 Identities = 44/133 (33%), Positives = 63/133 (47%), Gaps = 25/133 (18%)

Query: 62  KPHKCKY--CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTH-EKPHKCSICDYASV 118
           +   C +  C   F  +  + +H+                   TH  + H C+ C  A V
Sbjct: 4   RTIACPHKGCTKMFRDNSAMRKHLH------------------THGPRVHVCAECGKAFV 45

Query: 119 ELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEKPYACDI--CHARFT 174
           E SK++ H   HTGE+P+QC    C       F L+ H+RIHTG++PY C    C+ +F 
Sbjct: 46  ESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFA 105

Query: 175 QSNSLKSHRLIHT 187
           QS +LKSH L H 
Sbjct: 106 QSTNLKSHILTHA 118

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 91.8 bits (229), Expect = 1e-24
 Identities = 40/139 (28%), Positives = 57/139 (41%), Gaps = 23/139 (16%)

Query: 32  EERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTH 89
           E R   C    C + F+  ++++ H++TH G + H C  C   F  S +L RH       
Sbjct: 2   EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV---- 56

Query: 90  EKPELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAH--CTYAS 145
                       HT EKP +C+   C         +R H+R HTG+RPY C    C    
Sbjct: 57  ------------HTGEKPFQCTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKF 104

Query: 146 PDTFKLKRHLRIHTGEKPY 164
             +  LK H+  H   K  
Sbjct: 105 AQSTNLKSHILTHAKAKNN 123

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A* Length = 124

 Score = 76.8 bits (190), Expect = 1e-18
 Identities = 31/119 (26%), Positives = 53/119 (44%), Gaps = 21/119 (17%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELV 80
           + +HL +H   R H C+ C + F   + L+ H   HTG KP +C +  C  RF+    L 
Sbjct: 23  MRKHLHTHGP-RVHVCAECGKAFVESSKLKRHQLVHTGEKPFQCTFEGCGKRFSLDFNLR 81

Query: 81  RHVRYKHTHEKPELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQ 137
            HVR                 HT ++P+ C    C+    + + +++H+ +H   +  Q
Sbjct: 82  THVR----------------IHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNNQ 124

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 89.1 bits (222), Expect = 6e-24
 Identities = 34/85 (40%), Positives = 49/85 (57%), Gaps = 2/85 (2%)

Query: 105 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           E+P+ C +  CD    +   +  H+R HTG++P+QC  C      +  L  H+R HTGEK
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEK 61

Query: 163 PYACDICHARFTQSNSLKSHRLIHT 187
           P+ACDIC  +F +S+  K H  IH 
Sbjct: 62  PFACDICGRKFARSDERKRHTKIHL 86

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 74.8 bits (185), Expect = 2e-18
 Identities = 33/103 (32%), Positives = 49/103 (47%), Gaps = 18/103 (17%)

Query: 62  KPHKCKY--CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVE 119
           +P+ C    C+ RF+ SG L RH+R                 HT +KP +C IC      
Sbjct: 3   RPYACPVESCDRRFSQSGSLTRHIRI----------------HTGQKPFQCRICMRNFSR 46

Query: 120 LSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
              +  H+R+HTGE+P+ C  C      + + KRH +IH  +K
Sbjct: 47  SDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 72.5 bits (179), Expect = 2e-17
 Identities = 34/104 (32%), Positives = 45/104 (43%), Gaps = 18/104 (17%)

Query: 33  ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 90
           ERP+ C V  C+R F    SL  HI  HTG KP +C+ C   F+ S  L  H+R      
Sbjct: 2   ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIR------ 55

Query: 91  KPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER 134
                      HT EKP  C IC        + + H + H  ++
Sbjct: 56  ----------THTGEKPFACDICGRKFARSDERKRHTKIHLRQK 89

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C Length = 90

 Score = 62.9 bits (154), Expect = 9e-14
 Identities = 27/69 (39%), Positives = 37/69 (53%), Gaps = 1/69 (1%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
          L RH++ H+ ++P +C +C R F     L  HI THTG KP  C  C  +F  S E  RH
Sbjct: 22 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH 81

Query: 83 VRYKHTHEK 91
           +  H  +K
Sbjct: 82 TK-IHLRQK 89

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 87.5 bits (218), Expect = 4e-23
 Identities = 28/117 (23%), Positives = 40/117 (34%), Gaps = 16/117 (13%)

Query: 50  SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHK 109
                       K   CK+C   FT S  L+ H R                 HT E+P+ 
Sbjct: 4   GSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERT----------------HTDERPYT 47

Query: 110 CSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           C IC  A      +R+H   H+ E+P++C  C      +  L  H  +H        
Sbjct: 48  CDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 85.9 bits (214), Expect = 2e-22
 Identities = 29/94 (30%), Positives = 39/94 (41%), Gaps = 1/94 (1%)

Query: 94  LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKR 153
                      +K   C  C     +   +  H R+HT ERPY C  C  A      L+ 
Sbjct: 5   SSGGRLP-SKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRD 63

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           H  IH+ EKP+ C  C   F QS +L  H+ +H 
Sbjct: 64  HRYIHSKEKPFKCQECGKGFCQSRTLAVHKTLHM 97

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 79.4 bits (197), Expect = 6e-20
 Identities = 24/116 (20%), Positives = 33/116 (28%), Gaps = 16/116 (13%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
            +        ++   C  C R F    +L  H  THT  +P+ C  C   F     L  H
Sbjct: 5   SSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDH 64

Query: 83  VRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
                              H+ EKP KC  C     +   +  H   H        
Sbjct: 65  RYI----------------HSKEKPFKCQECGKGFCQSRTLAVHKTLHMQTSSPTA 104

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1 Length = 106

 Score = 75.2 bits (186), Expect = 3e-18
 Identities = 22/67 (32%), Positives = 32/67 (47%)

Query: 121 SKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK 180
           S           ++ + C  C      ++ L  H R HT E+PY CDICH  F + + L+
Sbjct: 3   SGSSGGRLPSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLR 62

Query: 181 SHRLIHT 187
            HR IH+
Sbjct: 63  DHRYIHS 69

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 87.1 bits (217), Expect = 7e-23
 Identities = 26/127 (20%), Positives = 44/127 (34%), Gaps = 23/127 (18%)

Query: 57  THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYA 116
             +G K + C+ C   FT   +  RH+                  H   +P+ C +C   
Sbjct: 4   GSSGDKLYPCQ-CGKSFTHKSQRDRHMSM----------------HLGLRPYGCGVCGKK 46

Query: 117 SVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHL--RIHTGEKPYACDICHARFT 174
                 +  HM+ HTG +PY+C  C       F  +      + +  K Y         T
Sbjct: 47  FKMKHHLVGHMKIHTGIKPYECNICAKR----FMWRDSFHRHVTSCTKSYEAAKAEQNTT 102

Query: 175 QSNSLKS 181
           +++   S
Sbjct: 103 EASGPSS 109

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 80.6 bits (200), Expect = 3e-20
 Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 3/86 (3%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE 161
            + +K + C  C  +    S+   HM  H G RPY C  C         L  H++IHTG 
Sbjct: 5   SSGDKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGI 63

Query: 162 KPYACDICHARFTQSNSLKSHRLIHT 187
           KPY C+IC  RF   +S   HR + +
Sbjct: 64  KPYECNICAKRFMWRDSF--HRHVTS 87

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 65.9 bits (162), Expect = 1e-14
 Identities = 18/61 (29%), Positives = 29/61 (47%), Gaps = 1/61 (1%)

Query: 127 MRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIH 186
               +G++ Y C  C  +     +  RH+ +H G +PY C +C  +F   + L  H  IH
Sbjct: 2   SSGSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 60

Query: 187 T 187
           T
Sbjct: 61  T 61

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 62.1 bits (152), Expect = 3e-13
 Identities = 25/91 (27%), Positives = 36/91 (39%), Gaps = 18/91 (19%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
             RH+  H   RP+ C VC + FK    L  H+  HTG+KP++C  C  RF       RH
Sbjct: 25  RDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFHRH 84

Query: 83  VRYKHTHEKPELVRHVRYKHTHEKPHKCSIC 113
           V                   +  K ++ +  
Sbjct: 85  V------------------TSCTKSYEAAKA 97

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 110

 Score = 46.7 bits (112), Expect = 2e-07
 Identities = 13/57 (22%), Positives = 26/57 (45%), Gaps = 2/57 (3%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGEL 79
           L  H+K H+  +P++C++C + F    S   H+   +  K ++    E   T +   
Sbjct: 53  LVGHMKIHTGIKPYECNICAKRFMWRDSFHRHV--TSCTKSYEAAKAEQNTTEASGP 107

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 81.1 bits (201), Expect = 1e-20
 Identities = 30/90 (33%), Positives = 47/90 (52%), Gaps = 4/90 (4%)

Query: 102 HTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRI 157
               + H C    C     + S ++ H+R+HTGE+PY+C    C +    + +L RH R 
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRK 69

Query: 158 HTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           HTG KP+ C +C+  F++S+ L  H   H 
Sbjct: 70  HTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 65.0 bits (159), Expect = 2e-14
 Identities = 33/106 (31%), Positives = 48/106 (45%), Gaps = 20/106 (18%)

Query: 30  HSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRY 85
             + R H C    C + +   + L+ H+ THTG KP+KC +  C+ RF  S EL RH R 
Sbjct: 10  LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYR- 68

Query: 86  KHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHT 131
                          KHT  KP +C +C+ +      +  HM+ H 
Sbjct: 69  ---------------KHTGAKPFQCGVCNRSFSRSDHLALHMKRHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 54.6 bits (132), Expect = 2e-10
 Identities = 24/68 (35%), Positives = 36/68 (52%), Gaps = 3/68 (4%)

Query: 23 LARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
          L  HL++H+ E+P+KC+   C+  F     L  H   HTG KP +C  C   F+ S  L 
Sbjct: 33 LKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSDHLA 92

Query: 81 RHVRYKHT 88
           H++ +H 
Sbjct: 93 LHMK-RHQ 99

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens} Length = 100

 Score = 54.2 bits (131), Expect = 2e-10
 Identities = 26/69 (37%), Positives = 30/69 (43%), Gaps = 6/69 (8%)

Query: 121 SKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI--CHARFTQSNS 178
                  R H  + P     CT     +  LK HLR HTGEKPY C    C  RF +S+ 
Sbjct: 7   GPDLEKRRIHYCDYPG----CTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDE 62

Query: 179 LKSHRLIHT 187
           L  H   HT
Sbjct: 63  LTRHYRKHT 71

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 79.5 bits (197), Expect = 3e-20
 Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 2/88 (2%)

Query: 101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIH 158
           K T       + C     + S ++ H+R+HTGE+PY C    C +    + +L RH R H
Sbjct: 1   KRTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKH 60

Query: 159 TGEKPYACDICHARFTQSNSLKSHRLIH 186
           TG +P+ C  C   F++S+ L  H   H
Sbjct: 61  TGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 59.5 bits (145), Expect = 2e-12
 Identities = 29/103 (28%), Positives = 43/103 (41%), Gaps = 18/103 (17%)

Query: 30  HSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKH 87
            +       + C + +   + L+ H+ THTG KP+ C +  C  +F  S EL RH R   
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYR--- 58

Query: 88  THEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSH 130
                        KHT  +P +C  CD A      +  HM+ H
Sbjct: 59  -------------KHTGHRPFQCQKCDRAFSRSDHLALHMKRH 88

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 57.5 bits (140), Expect = 9e-12
 Identities = 24/60 (40%), Positives = 28/60 (46%), Gaps = 2/60 (3%)

Query: 130 HTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI--CHARFTQSNSLKSHRLIHT 187
            T       A C      +  LK HLR HTGEKPY CD   C  +F +S+ L  H   HT
Sbjct: 2   RTATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHT 61

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A Length = 89

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 21/64 (32%), Positives = 33/64 (51%), Gaps = 2/64 (3%)

Query: 23 LARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
          L  HL++H+ E+P+ C    C   F     L  H   HTG +P +C+ C+  F+ S  L 
Sbjct: 23 LKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA 82

Query: 81 RHVR 84
           H++
Sbjct: 83 LHMK 86

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 79.5 bits (197), Expect = 5e-20
 Identities = 25/89 (28%), Positives = 40/89 (44%), Gaps = 3/89 (3%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE 161
            +      C IC     ++  +  H  SH+GE+PY C  C        ++  H+R H G 
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGS 61

Query: 162 --KPYACDICHARFTQSNSLKSH-RLIHT 187
             KPY C  C   F++ + L  H + +H+
Sbjct: 62  VGKPYICQSCGKGFSRPDHLNGHIKQVHS 90

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 69.8 bits (172), Expect = 2e-16
 Identities = 27/108 (25%), Positives = 39/108 (36%), Gaps = 19/108 (17%)

Query: 58  HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYAS 117
            +G     C+ C   F     L RH                   H+ EKP+ C +C    
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLS----------------HSGEKPYSCPVCGLRF 45

Query: 118 VELSKMRNHMRSHTGE--RPYQCAHCTYASPDTFKLKRHL-RIHTGEK 162
               +M  H+RSH G   +PY C  C         L  H+ ++H+G  
Sbjct: 46  KRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 60.6 bits (148), Expect = 8e-13
 Identities = 25/106 (23%), Positives = 38/106 (35%), Gaps = 15/106 (14%)

Query: 30  HSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTH 89
            S      C +C + F+ +  L  H  +H+G KP+ C  C  RF     +  HVR  H  
Sbjct: 2   SSGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVR-SHDG 60

Query: 90  EKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHM-RSHTGER 134
                           KP+ C  C         +  H+ + H+G  
Sbjct: 61  SVG-------------KPYICQSCGKGFSRPDHLNGHIKQVHSGPS 93

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 Length = 95

 Score = 58.3 bits (142), Expect = 6e-12
 Identities = 24/71 (33%), Positives = 35/71 (49%), Gaps = 2/71 (2%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTG--VKPHKCKYCESRFTTSGELV 80
          L RH  SHS E+P+ C VC   FK    +  H+ +H G   KP+ C+ C   F+    L 
Sbjct: 23 LNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN 82

Query: 81 RHVRYKHTHEK 91
           H++  H+   
Sbjct: 83 GHIKQVHSGPS 93

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 78.3 bits (194), Expect = 7e-20
 Identities = 17/66 (25%), Positives = 32/66 (48%)

Query: 101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTG 160
             +   P KCS C Y+    + +R H R H  +RP++C +C++ +     L +H++   G
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG 62

Query: 161 EKPYAC 166
           +     
Sbjct: 63  DMSGPS 68

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 75.6 bits (187), Expect = 6e-19
 Identities = 16/60 (26%), Positives = 28/60 (46%)

Query: 128 RSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
            S +   P +C+ C+Y+      L+ H RIH  ++P+ C+ C     Q ++L  H     
Sbjct: 2   SSGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFH 61

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 65.2 bits (160), Expect = 6e-15
 Identities = 16/83 (19%), Positives = 30/83 (36%), Gaps = 16/83 (19%)

Query: 57  THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYA 116
           + +   P KC  C    ++   L  H R                 H  ++P KC+ C + 
Sbjct: 3   SGSSGHPEKCSECSYSCSSKAALRIHER----------------IHCTDRPFKCNYCSFD 46

Query: 117 SVELSKMRNHMRSHTGERPYQCA 139
           + + S +  HM+   G+     +
Sbjct: 47  TKQPSNLSKHMKKFHGDMSGPSS 69

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 60.6 bits (148), Expect = 4e-13
 Identities = 19/64 (29%), Positives = 27/64 (42%), Gaps = 1/64 (1%)

Query: 29 SHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHT 88
          S S   P KCS C     + A+L+ H   H   +P KC YC         L +H++ K  
Sbjct: 3  SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMK-KFH 61

Query: 89 HEKP 92
           +  
Sbjct: 62 GDMS 65

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 70

 Score = 37.9 bits (89), Expect = 1e-04
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
          L  H + H  +RP KC+ C    K  ++L  H+    G      
Sbjct: 25 LRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDMSGPS 68

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 76.4 bits (189), Expect = 6e-19
 Identities = 21/85 (24%), Positives = 34/85 (40%), Gaps = 4/85 (4%)

Query: 106 KPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYA 165
           KP +C IC         +  H+R+HTGE+P+ C  C      + + KRH  I     P  
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQH-ILPIL 60

Query: 166 CDICHARFTQSNSLKSHRL---IHT 187
            D      +++  L++         
Sbjct: 61  EDKVEELLSKNYHLENEVARLKKLV 85

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 68.3 bits (168), Expect = 8e-16
 Identities = 22/105 (20%), Positives = 32/105 (30%), Gaps = 20/105 (19%)

Query: 61  VKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVEL 120
           +KP +C+ C   F+ S  L  H+R                 HT EKP  C IC       
Sbjct: 1   MKPFQCRICMRNFSRSDHLTTHIR----------------THTGEKPFACDICGRKFARS 44

Query: 121 SKMRNHMRSHTGERPYQCAHCTYA---SPDTFKLKRHLRIHTGEK 162
            + + H        P            +         L+   GE+
Sbjct: 45  DERKRHRDIQH-ILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 67.9 bits (167), Expect = 1e-15
 Identities = 27/104 (25%), Positives = 35/104 (33%), Gaps = 20/104 (19%)

Query: 34  RPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPE 93
           +P +C +C R F     L  HI THTG KP  C  C  +F  S E  RH           
Sbjct: 2   KPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRD---IQ---- 54

Query: 94  LVRHVRYKHTHEKPHKCSICDYA---SVELSKMRNHMRSHTGER 134
                     H  P      +     +  L      ++   GER
Sbjct: 55  ----------HILPILEDKVEELLSKNYHLENEVARLKKLVGER 88

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A Length = 88

 Score = 54.0 bits (131), Expect = 2e-10
 Identities = 14/67 (20%), Positives = 24/67 (35%), Gaps = 1/67 (1%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
          L  H+++H+ E+P  C +C R F      + H +      P      E   + +  L   
Sbjct: 19 LTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENE 77

Query: 83 VRYKHTH 89
          V      
Sbjct: 78 VARLKKL 84

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 73.3 bits (181), Expect = 6e-18
 Identities = 17/69 (24%), Positives = 29/69 (42%), Gaps = 3/69 (4%)

Query: 122 KMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE--KPYACDICHARFTQSNSL 179
              +  R+H+GE+PY+C  C      +  +K H+     E    + C  C     + + L
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 180 KSH-RLIHT 187
             H R  H+
Sbjct: 62  GVHLRKQHS 70

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 70.6 bits (174), Expect = 7e-17
 Identities = 17/72 (23%), Positives = 34/72 (47%), Gaps = 2/72 (2%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTG--VKPHKCKYCESRFTTSGELV 80
               ++HS E+P++C +C   F    +++ HI       V    C +C++      +L 
Sbjct: 3  SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLG 62

Query: 81 RHVRYKHTHEKP 92
           H+R +H++  P
Sbjct: 63 VHLRKQHSYSGP 74

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 67.9 bits (167), Expect = 7e-16
 Identities = 23/88 (26%), Positives = 34/88 (38%), Gaps = 15/88 (17%)

Query: 50  SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHK 109
           S  +   TH+G KP++C  C +RFT SG +  H+  +   E                   
Sbjct: 2   SSGSSGRTHSGEKPYECYICHARFTQSGTMKMHIL-QKHTEN-------------VAKFH 47

Query: 110 CSICDYASVELSKMRNHMRS-HTGERPY 136
           C  CD      S +  H+R  H+   P 
Sbjct: 48  CPHCDTVIARKSDLGVHLRKQHSYSGPS 75

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 66.8 bits (164), Expect = 2e-15
 Identities = 20/75 (26%), Positives = 29/75 (38%), Gaps = 4/75 (5%)

Query: 94  LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGE--RPYQCAHCTYASPDTFKL 151
                R  H+ EKP++C IC     +   M+ H+     E    + C HC         L
Sbjct: 3   SGSSGR-THSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDL 61

Query: 152 KRHLR-IHTGEKPYA 165
             HLR  H+   P +
Sbjct: 62  GVHLRKQHSYSGPSS 76

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 72.9 bits (180), Expect = 9e-18
 Identities = 24/67 (35%), Positives = 36/67 (53%)

Query: 121 SKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK 180
               +H      ++PY+C  C  +      L  H  +HTGEKPY C+IC A+F +  +LK
Sbjct: 3   HHHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLK 62

Query: 181 SHRLIHT 187
           +H  IH+
Sbjct: 63  THTRIHS 69

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 67.9 bits (167), Expect = 8e-16
 Identities = 26/71 (36%), Positives = 34/71 (47%), Gaps = 1/71 (1%)

Query: 94  LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKR 153
              H       +KP+KC  C  +      + +H   HTGE+PY+C  C         LK 
Sbjct: 5   HHHHSHM-THSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKT 63

Query: 154 HLRIHTGEKPY 164
           H RIH+GEKPY
Sbjct: 64  HTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 61.3 bits (150), Expect = 2e-13
 Identities = 25/87 (28%), Positives = 38/87 (43%), Gaps = 16/87 (18%)

Query: 50  SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHK 109
              +H +     KP+KC  C++ F   G L  H                   HT EKP++
Sbjct: 4   HHHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTV----------------HTGEKPYR 47

Query: 110 CSICDYASVELSKMRNHMRSHTGERPY 136
           C+IC       + ++ H R H+GE+PY
Sbjct: 48  CNICGAQFNRPANLKTHTRIHSGEKPY 74

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 23/70 (32%), Positives = 35/70 (50%), Gaps = 1/70 (1%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
             H      ++P+KC  C+  F+   +L +H   HTG KP++C  C ++F     L  H
Sbjct: 5  HHHHSHMTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTH 64

Query: 83 VRYKHTHEKP 92
           R  H+ EKP
Sbjct: 65 TR-IHSGEKP 73

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens} Length = 74

 Score = 38.6 bits (91), Expect = 7e-05
 Identities = 16/42 (38%), Positives = 26/42 (61%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPH 64
          LA H   H+ E+P++C++C   F   A+L+ H   H+G KP+
Sbjct: 33 LASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY 74

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 72.8 bits (180), Expect = 1e-17
 Identities = 29/79 (36%), Positives = 42/79 (53%)

Query: 109 KCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI 168
            C IC  +    S +  H+  H+  RPY C +C         +K+H  IHTGEKP+ C +
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQV 62

Query: 169 CHARFTQSNSLKSHRLIHT 187
           C   F+QS++L +H   HT
Sbjct: 63  CGKAFSQSSNLITHSRKHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 57.8 bits (141), Expect = 5e-12
 Identities = 30/96 (31%), Positives = 45/96 (46%), Gaps = 16/96 (16%)

Query: 37  KCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVR 96
            C +C + FK  ++L  H+  H+  +P+ C+YC  RF    ++ +H              
Sbjct: 3   DCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFI----------- 51

Query: 97  HVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTG 132
                HT EKPHKC +C  A  + S +  H R HTG
Sbjct: 52  -----HTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 57.0 bits (139), Expect = 1e-11
 Identities = 28/96 (29%), Positives = 38/96 (39%), Gaps = 16/96 (16%)

Query: 65  KCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMR 124
            CK C   F  S  L  H+                  H+  +P+ C  C     + S M+
Sbjct: 3   DCKICGKSFKRSSTLSTHLL----------------IHSDTRPYPCQYCGKRFHQKSDMK 46

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTG 160
            H   HTGE+P++C  C  A   +  L  H R HTG
Sbjct: 47  KHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKHTG 82

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 54.7 bits (133), Expect = 1e-10
 Identities = 28/66 (42%), Positives = 38/66 (57%), Gaps = 1/66 (1%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
          L+ HL  HS+ RP+ C  C + F   + ++ H   HTG KPHKC+ C   F+ S  L+ H
Sbjct: 17 LSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITH 76

Query: 83 VRYKHT 88
           R KHT
Sbjct: 77 SR-KHT 81

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus} Length = 82

 Score = 54.0 bits (131), Expect = 2e-10
 Identities = 19/52 (36%), Positives = 26/52 (50%)

Query: 136 YQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           + C  C  +   +  L  HL IH+  +PY C  C  RF Q + +K H  IHT
Sbjct: 2   FDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHT 53

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 69.8 bits (172), Expect = 1e-16
 Identities = 27/62 (43%), Positives = 37/62 (59%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI 185
               H+GE+PY C  C  A   +  L +H R+HTGEKPY C  C   F+Q++ L +H+ I
Sbjct: 5   SSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRI 64

Query: 186 HT 187
           HT
Sbjct: 65  HT 66

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 69.0 bits (170), Expect = 2e-16
 Identities = 25/72 (34%), Positives = 30/72 (41%), Gaps = 1/72 (1%)

Query: 94  LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKR 153
                   H+ EKP+ C  C  A    S +  H R HTGE+PY+C  C  A      L  
Sbjct: 2   SSGSSGI-HSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLIN 60

Query: 154 HLRIHTGEKPYA 165
           H RIHT      
Sbjct: 61  HQRIHTSGPSSG 72

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 56.7 bits (138), Expect = 1e-11
 Identities = 23/70 (32%), Positives = 32/70 (45%), Gaps = 1/70 (1%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
           +     HS E+P+ C  C + F   + L  H   HTG KP+KC  C   F+ +  L+ H
Sbjct: 2  SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINH 61

Query: 83 VRYKHTHEKP 92
           R  HT    
Sbjct: 62 QRI-HTSGPS 70

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 49.0 bits (118), Expect = 9e-09
 Identities = 15/37 (40%), Positives = 21/37 (56%)

Query: 151 LKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 IH+GEKPY C  C   F++S+ L  H+ +HT
Sbjct: 2   SSGSSGIHSGEKPYGCVECGKAFSRSSILVQHQRVHT 38

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 72

 Score = 38.2 bits (90), Expect = 9e-05
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPH 64
          L +H + H+ E+P+KC  C + F   + L NH   HT     
Sbjct: 30 LVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGPSS 71

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 69.8 bits (172), Expect = 1e-16
 Identities = 23/67 (34%), Positives = 29/67 (43%)

Query: 121 SKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK 180
                        R Y+C  C  +   +  L +H R HTGEKPY CD C   F Q + L 
Sbjct: 4   GSSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLI 63

Query: 181 SHRLIHT 187
            H  +HT
Sbjct: 64  GHHRVHT 70

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 66.7 bits (164), Expect = 2e-15
 Identities = 23/71 (32%), Positives = 32/71 (45%), Gaps = 1/71 (1%)

Query: 94  LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKR 153
             R    +    + +KC  C  +    S +  H R+HTGE+PY+C  C  A      L  
Sbjct: 6   SGRSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIG 64

Query: 154 HLRIHTGEKPY 164
           H R+HTG  P 
Sbjct: 65  HHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 59.4 bits (145), Expect = 1e-12
 Identities = 25/70 (35%), Positives = 30/70 (42%), Gaps = 1/70 (1%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
            R      E R +KC  C + F   + L  H  THTG KP+KC  C   F     L+ H
Sbjct: 6  SGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGH 65

Query: 83 VRYKHTHEKP 92
           R  HT   P
Sbjct: 66 HR-VHTGSGP 74

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 56.7 bits (138), Expect = 1e-11
 Identities = 25/87 (28%), Positives = 34/87 (39%), Gaps = 16/87 (18%)

Query: 50  SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHK 109
           S           + +KC  C   F+ S +L +H R                 HT EKP+K
Sbjct: 5   SSGRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRT----------------HTGEKPYK 48

Query: 110 CSICDYASVELSKMRNHMRSHTGERPY 136
           C  C  A ++ S +  H R HTG  P 
Sbjct: 49  CDECGKAFIQRSHLIGHHRVHTGSGPS 75

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 77

 Score = 39.0 bits (92), Expect = 6e-05
 Identities = 15/43 (34%), Positives = 24/43 (55%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHK 65
          L++H ++H+ E+P+KC  C + F   + L  H   HTG  P  
Sbjct: 34 LSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSS 76

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 69.0 bits (169), Expect = 4e-16
 Identities = 16/62 (25%), Positives = 24/62 (38%), Gaps = 3/62 (4%)

Query: 130 HTGERPYQCAHCTYASPDTFKLKRHLRIHT---GEKPYACDICHARFTQSNSLKSHRLIH 186
            +G    QC  C +       L  H R H        + C+ C  RF + +S+ +HR   
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 187 TP 188
            P
Sbjct: 62  HP 63

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 61.7 bits (150), Expect = 2e-13
 Identities = 14/67 (20%), Positives = 20/67 (29%), Gaps = 3/67 (4%)

Query: 30 HSEERPHKCSVCERGFKTIASLQNHINTHT---GVKPHKCKYCESRFTTSGELVRHVRYK 86
           S     +C +C    +  ASL  H   H          C++C  RF     +  H    
Sbjct: 2  SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKS 61

Query: 87 HTHEKPE 93
          H      
Sbjct: 62 HPALLLA 68

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 78

 Score = 55.9 bits (135), Expect = 3e-11
 Identities = 11/84 (13%), Positives = 16/84 (19%), Gaps = 13/84 (15%)

Query: 58  HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYAS 117
            +G    +C+ C         L  H R KH                      C  C    
Sbjct: 2   SSGSSGLQCEICGFTCRQKASLNWHQR-KHAETVAA------------LRFPCEFCGKRF 48

Query: 118 VELSKMRNHMRSHTGERPYQCAHC 141
            +   +  H               
Sbjct: 49  EKPDSVAAHRSKSHPALLLAPQES 72

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 68.7 bits (169), Expect = 4e-16
 Identities = 18/92 (19%), Positives = 30/92 (32%), Gaps = 12/92 (13%)

Query: 50  SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHK 109
           S  +   THTG KP+ C +C+  F     L  H + ++              +       
Sbjct: 2   SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDP-----------NFVPAAFV 49

Query: 110 CSICDYASVELSKMRNHMRSHTGERPYQCAHC 141
           CS C       + M  H  +  G    +  + 
Sbjct: 50  CSKCGKTFTRRNTMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 67.9 bits (167), Expect = 1e-15
 Identities = 16/80 (20%), Positives = 25/80 (31%), Gaps = 5/80 (6%)

Query: 94  LVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGE----RPYQCAHCTYASPDTF 149
                R  HT EKP+ CS CD    +   +  H + +         + C+ C        
Sbjct: 3   SGSSGRT-HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRN 61

Query: 150 KLKRHLRIHTGEKPYACDIC 169
            + RH     G      +  
Sbjct: 62  TMARHADNCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 67.9 bits (167), Expect = 1e-15
 Identities = 18/68 (26%), Positives = 28/68 (41%), Gaps = 4/68 (5%)

Query: 124 RNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE----KPYACDICHARFTQSNSL 179
            +  R+HTGE+PY C+HC         L  H + +         + C  C   FT+ N++
Sbjct: 4   GSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTM 63

Query: 180 KSHRLIHT 187
             H     
Sbjct: 64  ARHADNCA 71

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 56.8 bits (138), Expect = 2e-11
 Identities = 15/95 (15%), Positives = 26/95 (27%), Gaps = 20/95 (21%)

Query: 23  LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTG----VKPHKCKYCESRFTTSGE 78
                ++H+ E+P+ CS C++ F+    L  H   +           C  C   FT    
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNT 62

Query: 79  LVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSIC 113
           + RH                          +    
Sbjct: 63  MARHAD----------------NCAGPDGVEGENS 81

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 86

 Score = 51.0 bits (123), Expect = 3e-09
 Identities = 15/37 (40%), Positives = 16/37 (43%)

Query: 151 LKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                R HTGEKPYAC  C   F Q   L  H   + 
Sbjct: 3   SGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 39

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 67.2 bits (165), Expect = 2e-15
 Identities = 12/73 (16%), Positives = 26/73 (35%), Gaps = 5/73 (6%)

Query: 102 HTHEKPHKCSI--CDYASVELSKMRNHMR-SHTGERPYQCAH--CTYASPDTFKLKRHLR 156
            +      C    C         + +H +  H  ++ + C    C  +      LK H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 157 IHTGEKPYACDIC 169
           +H+  + Y C+  
Sbjct: 62  LHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 63.0 bits (154), Expect = 6e-14
 Identities = 18/88 (20%), Positives = 29/88 (32%), Gaps = 19/88 (21%)

Query: 58  HTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS--IC 113
            +G     C +  C   F+    L  H +Y+H                H+K   C    C
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQH---------------IHQKSFSCPEPAC 46

Query: 114 DYASVELSKMRNHMRSHTGERPYQCAHC 141
             +      ++ HM+ H+  R Y C   
Sbjct: 47  GKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 58.7 bits (143), Expect = 3e-12
 Identities = 14/63 (22%), Positives = 22/63 (34%), Gaps = 5/63 (7%)

Query: 130 HTGERPYQCAH--CTYASPDTFKLKRHLRI-HTGEKPYACD--ICHARFTQSNSLKSHRL 184
            +G     C    C     +   L  H +  H  +K ++C    C   F     LK H  
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 185 IHT 187
           +H+
Sbjct: 62  LHS 64

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 51.8 bits (125), Expect = 1e-09
 Identities = 16/89 (17%), Positives = 22/89 (24%), Gaps = 21/89 (23%)

Query: 30  HSEERPHKCSV--CERGFKTIASLQNHI-NTHTGVKPHKCKY--CESRFTTSGELVRHVR 84
            S      C    C R F     L +H    H   K   C    C   F     L  H++
Sbjct: 2   SSGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMK 61

Query: 85  YKHTHEKPELVRHVRYKHTHEKPHKCSIC 113
                            H+  + + C   
Sbjct: 62  ----------------LHSDTRDYICEFS 74

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 79

 Score = 43.7 bits (104), Expect = 1e-06
 Identities = 11/50 (22%), Positives = 21/50 (42%), Gaps = 3/50 (6%)

Query: 23 LARHLK-SHSEERPHKCS--VCERGFKTIASLQNHINTHTGVKPHKCKYC 69
          L  H K  H  ++   C    C + F     L+ H+  H+  + + C++ 
Sbjct: 25 LNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFS 74

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 64.9 bits (159), Expect = 8e-15
 Identities = 15/64 (23%), Positives = 24/64 (37%), Gaps = 2/64 (3%)

Query: 128 RSHTGERPYQCAHCTYASPDTFKLKRHLRI--HTGEKPYACDICHARFTQSNSLKSHRLI 185
            +  GE  Y+C  C+          RH         K Y C  C   FT+ +++ +H  I
Sbjct: 3   FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKI 62

Query: 186 HTPL 189
              +
Sbjct: 63  IHKI 66

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 56.8 bits (138), Expect = 1e-11
 Identities = 16/60 (26%), Positives = 26/60 (43%), Gaps = 2/60 (3%)

Query: 30 HSEERPHKCSVCERGFKTIASLQNH--INTHTGVKPHKCKYCESRFTTSGELVRHVRYKH 87
             E  ++C VC R +  I++   H   +    VK + C +C   FT    +  HV+  H
Sbjct: 5  KEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIH 64

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1 Length = 66

 Score = 53.7 bits (130), Expect = 1e-10
 Identities = 14/76 (18%), Positives = 21/76 (27%), Gaps = 14/76 (18%)

Query: 57  THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYA 116
           T  G   ++CK C   +T      RH    H                + K + C  C   
Sbjct: 4   TKEGEHTYRCKVCSRVYTHISNFCRHYVTSH--------------KRNVKVYPCPFCFKE 49

Query: 117 SVELSKMRNHMRSHTG 132
                 M  H++    
Sbjct: 50  FTRKDNMTAHVKIIHK 65

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 61.9 bits (151), Expect = 1e-13
 Identities = 25/70 (35%), Positives = 39/70 (55%), Gaps = 4/70 (5%)

Query: 120 LSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSN 177
           ++ + N++      RPY C    C      + +L RH+RIHTG+KP+ C IC   F++S+
Sbjct: 6   MNNLLNYVV--PKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSD 63

Query: 178 SLKSHRLIHT 187
            L +H   HT
Sbjct: 64  HLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 51.2 bits (123), Expect = 1e-09
 Identities = 25/67 (37%), Positives = 34/67 (50%), Gaps = 5/67 (7%)

Query: 26 HLKSHSE--ERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVR 81
          +L ++     RP+ C V  C+R F     L  HI  HTG KP +C+ C   F+ S  L  
Sbjct: 8  NLLNYVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTT 67

Query: 82 HVRYKHT 88
          H+R  HT
Sbjct: 68 HIR-THT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 45.4 bits (108), Expect = 2e-07
 Identities = 22/77 (28%), Positives = 33/77 (42%), Gaps = 18/77 (23%)

Query: 57  THTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICD 114
               ++P+ C    C+ RF+ S EL RH+R                 HT +KP +C IC 
Sbjct: 13  VVPKMRPYACPVESCDRRFSRSDELTRHIR----------------IHTGQKPFQCRICM 56

Query: 115 YASVELSKMRNHMRSHT 131
                   +  H+R+HT
Sbjct: 57  RNFSRSDHLTTHIRTHT 73

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 Length = 73

 Score = 36.1 bits (84), Expect = 6e-04
 Identities = 15/37 (40%), Positives = 22/37 (59%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHT 59
          L RH++ H+ ++P +C +C R F     L  HI THT
Sbjct: 37 LTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT 73

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 56.9 bits (138), Expect = 1e-11
 Identities = 18/65 (27%), Positives = 27/65 (41%), Gaps = 2/65 (3%)

Query: 121 SKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNS 178
           ++++ H  SHT + PY+C H  C        +LKRH ++H G      D C         
Sbjct: 17  NQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTL 76

Query: 179 LKSHR 183
              H 
Sbjct: 77  YLKHV 81

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.1 bits (123), Expect = 2e-09
 Identities = 22/99 (22%), Positives = 33/99 (33%), Gaps = 19/99 (19%)

Query: 36  HKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEK 91
           + C    C + FK    L+ H  +HT   P++C +  C+ RF+    L RH +  H    
Sbjct: 2   YVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEK-VHAGYP 60

Query: 92  PELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSH 130
                        +K   CS          K       H
Sbjct: 61  C------------KKDDSCSFVGKTWTLYLKH--VAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 51.1 bits (123), Expect = 3e-09
 Identities = 18/67 (26%), Positives = 29/67 (43%), Gaps = 2/67 (2%)

Query: 23 LARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELV 80
          L  H  SH+++ P++C    C++ F   + L+ H   H G    K   C     T    +
Sbjct: 19 LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAGYPCKKDDSCSFVGKTWTLYL 78

Query: 81 RHVRYKH 87
          +HV   H
Sbjct: 79 KHVAECH 85

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A Length = 85

 Score = 47.6 bits (114), Expect = 4e-08
 Identities = 15/39 (38%), Positives = 19/39 (48%), Gaps = 2/39 (5%)

Query: 151 LKRHLRIHTGEKPYACD--ICHARFTQSNSLKSHRLIHT 187
           LK H   HT + PY C    C  RF+  + LK H  +H 
Sbjct: 19  LKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHA 57

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.6 bits (135), Expect = 2e-11
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+ Y C  C  +      L +H R+H+GEKP   
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEK Y C  C   F+++  L  H  +H+
Sbjct: 3   SGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHS 36

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 11/37 (29%), Positives = 16/37 (43%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EK + C  C  +      +  H R H+GE+P   
Sbjct: 7   GTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 15/59 (25%), Positives = 24/59 (40%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG K + CK C   F+ +  L++H R                 H+ EKP   S
Sbjct: 2   SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERL----------------HSGEKPSGPS 44

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+ + C  C + F     L  H   H+G KP   
Sbjct: 1  GSSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 55.2 bits (134), Expect = 2e-11
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+PY CA C  A      L +H +IHT +KP   
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 15/34 (44%), Positives = 18/34 (52%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY C  C   FT  ++L  H+ IHT
Sbjct: 3   SGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHT 36

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 12/39 (30%), Positives = 19/39 (48%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP+ C+ C  A    S +  H + HT ++P   + 
Sbjct: 7   GTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSS 45

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 15/59 (25%), Positives = 23/59 (38%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP+ C  C   FT    L++H +                 HT +KP   S
Sbjct: 2   SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKI----------------HTKQKPSGPS 44

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 12/43 (27%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+ C+ C + F   ++L  H   HT  KP   
Sbjct: 1  GSSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGP 43

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 55.9 bits (135), Expect = 3e-11
 Identities = 24/70 (34%), Positives = 32/70 (45%), Gaps = 4/70 (5%)

Query: 121 SKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEKPYACDI--CHARFTQS 176
           S         +  R + C+H  C      +  LK H R HTGEKP++C    C  RF +S
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARS 62

Query: 177 NSLKSHRLIH 186
           + L  HR  H
Sbjct: 63  DELSRHRRTH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 52.4 bits (126), Expect = 5e-10
 Identities = 25/66 (37%), Positives = 31/66 (46%), Gaps = 4/66 (6%)

Query: 23 LARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY--CESRFTTSGE 78
           +      S  R H CS   C + +   + L+ H  THTG KP  C +  CE RF  S E
Sbjct: 5  SSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDE 64

Query: 79 LVRHVR 84
          L RH R
Sbjct: 65 LSRHRR 70

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 44.3 bits (105), Expect = 6e-07
 Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 4/62 (6%)

Query: 101 KHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLR 156
             +  + H CS   C     + S ++ H R+HTGE+P+ C+   C      + +L RH R
Sbjct: 11  DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRR 70

Query: 157 IH 158
            H
Sbjct: 71  TH 72

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens} Length = 72

 Score = 35.8 bits (83), Expect = 8e-04
 Identities = 18/86 (20%), Positives = 28/86 (32%), Gaps = 20/86 (23%)

Query: 49  ASLQNHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEK 106
           +         + ++ H C +  C   +  S  L  H R                 HT EK
Sbjct: 3   SGSSGPQIDSSRIRSHICSHPGCGKTYFKSSHLKAHTR----------------THTGEK 46

Query: 107 PHKCSI--CDYASVELSKMRNHMRSH 130
           P  CS   C+       ++  H R+H
Sbjct: 47  PFSCSWKGCERRFARSDELSRHRRTH 72

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.8 bits (133), Expect = 3e-11
 Identities = 19/41 (46%), Positives = 24/41 (58%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S +GE+PY C +C  A   + +L RH RIHTGEKP   
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 15/35 (42%), Positives = 17/35 (48%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 +GEKPY CD C   F  S  L  H+ IHT
Sbjct: 2   SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHT 36

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 13/45 (28%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
                  + EKP+ C  C  A    +++  H R HTGE+P   + 
Sbjct: 2   SSGS-SGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSS 45

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 4e-06
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
              S S E+P+ C  C + F   A L  H   HTG KP   
Sbjct: 2  SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGP 43

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 20/58 (34%), Positives = 24/58 (41%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ +G KP+ C YC   F  S ELVRH R                 HT EKP   S
Sbjct: 3   SGSSGSGEKPYVCDYCGKAFGLSAELVRHQRI----------------HTGEKPSGPS 44

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.9 bits (133), Expect = 4e-11
 Identities = 16/42 (38%), Positives = 23/42 (54%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+PY+C  C  A  D     +H R+HTG++P   
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.9 bits (107), Expect = 2e-07
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY C  C   F  ++S   H+ +HT
Sbjct: 3   SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHT 36

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 7e-07
 Identities = 16/39 (41%), Positives = 20/39 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP+KC  C  A  + S    H R HTG+RP   + 
Sbjct: 7   GTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSS 45

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 8e-06
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KC  C + F   +S   H   HTG +P   
Sbjct: 1  GSSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGP 43

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.6 bits (88), Expect = 1e-04
 Identities = 14/59 (23%), Positives = 22/59 (37%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP+KC  C   F  +    +H R                 HT ++P   S
Sbjct: 2   SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRL----------------HTGQRPSGPS 44

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 56.1 bits (135), Expect = 4e-11
 Identities = 19/83 (22%), Positives = 30/83 (36%), Gaps = 7/83 (8%)

Query: 57  THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYA 116
                     K C+  F+T  ELV HV  +H     +      ++        C     +
Sbjct: 19  IDEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEE-------CPREGKS 71

Query: 117 SVELSKMRNHMRSHTGERPYQCA 139
                K+ NH+R HTGE+    +
Sbjct: 72  FKAKYKLVNHIRVHTGEKSGPSS 94

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens} Length = 95

 Score = 46.5 bits (110), Expect = 1e-07
 Identities = 20/83 (24%), Positives = 26/83 (31%), Gaps = 9/83 (10%)

Query: 30  HSEERPHKCSVCERGFKTIASLQNHIN-THTGVKPHKCKYCESRFTTSGELVRHVRYKHT 88
              +       C+R F T+  L  H+   H G        C              +YK  
Sbjct: 20  DEAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYK-- 77

Query: 89  HEKPELVRHVRYKHTHEKPHKCS 111
                LV H+R  HT EK    S
Sbjct: 78  -----LVNHIR-VHTGEKSGPSS 94

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 54.4 bits (132), Expect = 4e-11
 Identities = 17/40 (42%), Positives = 19/40 (47%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYA 165
              S  GE+PY C  C         LK HLRIHTG  P +
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSS 41

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 51.0 bits (123), Expect = 1e-09
 Identities = 17/34 (50%), Positives = 19/34 (55%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 GEKPY C+IC  RF    +LKSH  IHT
Sbjct: 2   SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHT 35

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 46.3 bits (111), Expect = 6e-08
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 136
              EKP+ C IC      L  +++H+R HTG  P 
Sbjct: 6   SGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 12/39 (30%), Positives = 21/39 (53%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPH 64
             S   E+P+ C +C   F+ + +L++H+  HTG  P 
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPS 40

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 42

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 13/39 (33%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
             +  G KP+ C+ C +RF     L  H+R  HT   P
Sbjct: 2  SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRI-HTGSGP 39

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.5 bits (132), Expect = 4e-11
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD 167
           +   S +GE+PY+C  C         L  H R+HTGEK     
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPS 44

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 11/34 (32%), Positives = 16/34 (47%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                +GEKPY C  C   + +   L  H+ +HT
Sbjct: 3   SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHT 36

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + EKP+KC  C         +  H R HTGE+    
Sbjct: 7   GSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 15/41 (36%), Positives = 19/41 (46%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
             S S E+P+KC  C +G+K    L  H   HTG K    
Sbjct: 3  SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGP 43

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 14/59 (23%), Positives = 21/59 (35%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ +G KP+KC  C   +    +L  H R                 HT EK    S
Sbjct: 2   SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQR----------------VHTGEKLSGPS 44

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.5 bits (132), Expect = 5e-11
 Identities = 16/42 (38%), Positives = 20/42 (47%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+PY+C  C         L  H  +HTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 6e-08
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY C+ C   F     L +H ++HT
Sbjct: 3   SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHT 36

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 13/37 (35%), Positives = 17/37 (45%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP+KC  C    +    +  H   HTGE+P   
Sbjct: 7   GTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KC  C +GF     L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGP 43

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP+KC+ C   F    +L  H                   HT EKP   S
Sbjct: 2   SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMV----------------HTGEKPSGPS 44

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 54.5 bits (132), Expect = 5e-11
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TG++P++C HC  +      L  H RIHTGEK    
Sbjct: 2   SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TG+KP+ C  C   F    +L +H+ IHT
Sbjct: 3   SGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHT 36

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T +KP +C+ C  +      +  H R HTGE+    
Sbjct: 7   GTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 16/40 (40%), Positives = 21/40 (52%), Gaps = 1/40 (2%)

Query: 53 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
          +  ++ TG KP +C +C   F   G LV H R  HT EK 
Sbjct: 2  SSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRI-HTGEKS 40

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 45

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + ++P +C+ C + F+   +L  H   HTG K    
Sbjct: 1  GSSGSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPS 43

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.4 bits (132), Expect = 6e-11
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD 167
           +   S TGE+PY C  C  A   +  L +HLR+HT E      
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY+C++C   F  S  L  H  +HT
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHT 36

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 5e-07
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP+ C++C  A V  + +  H+R HT E     + 
Sbjct: 7   GTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS 45

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 4e-06
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 67
               S + E+P+ C+VC + F   A L  H+  HT        
Sbjct: 1  GSSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPS 44

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP+ C  C   F  S  L +H+R                 HT E     S
Sbjct: 2   SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRV----------------HTQETLSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 54.1 bits (131), Expect = 6e-11
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TG+RPY+C  C  A      L  H R HTGEKP   
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.8 bits (112), Expect = 4e-08
 Identities = 13/35 (37%), Positives = 16/35 (45%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TG++PY C  C   F   +SL  HR  HT
Sbjct: 2   SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHT 36

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 3e-07
 Identities = 16/44 (36%), Positives = 23/44 (52%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 67
               S + +RP++C  C + FKT +SL  H  +HTG KP    
Sbjct: 1  GSSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPS 44

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T ++P++C  C  A    S +  H RSHTGE+P   
Sbjct: 7   GTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGP 43

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.9 bits (89), Expect = 7e-05
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG +P++C  C   F T   L+ H R                 HT EKP   S
Sbjct: 3   SGSSGTGQRPYECIECGKAFKTKSSLICHRR----------------SHTGEKPSGPS 44

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 6e-11
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C       F L  H ++HTGE+P   
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 7e-08
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY C+ C   +    +L  H+ +HT
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHT 36

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 7e-07
 Identities = 14/37 (37%), Positives = 17/37 (45%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP+KC  C         +  H + HTGERP   
Sbjct: 7   GTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KC  C +G+ +  +L  H   HTG +P   
Sbjct: 1  GSSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGP 43

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 14/58 (24%), Positives = 22/58 (37%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP+KC+ C   + +   L  H +                 HT E+P   S
Sbjct: 3   SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQK----------------VHTGERPSGPS 44

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 54.0 bits (131), Expect = 7e-11
 Identities = 18/41 (43%), Positives = 24/41 (58%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+P++CA C  +   + +L  H RIHTGEKP   
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKP+ C  C   F+ S+ L +H+ IHT
Sbjct: 2   SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHT 36

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 44.4 bits (106), Expect = 3e-07
 Identities = 14/45 (31%), Positives = 21/45 (46%), Gaps = 1/45 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
                  T EKP +C+ C  +    S++  H R HTGE+P   + 
Sbjct: 2   SSGSS-GTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS 45

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 40.9 bits (97), Expect = 6e-06
 Identities = 13/42 (30%), Positives = 19/42 (45%)

Query: 25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
              S + E+P +C+ C + F   + L  H   HTG KP   
Sbjct: 2  SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGP 43

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A Length = 46

 Score = 38.6 bits (91), Expect = 4e-05
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP +C  C   F+ S +L  H R                 HT EKP   S
Sbjct: 3   SGSSGTGEKPFECAECGKSFSISSQLATHQRI----------------HTGEKPSGPS 44

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 7e-11
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGER Y+C+ C  A      L  H RIH GEKP   
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 3e-07
 Identities = 12/34 (35%), Positives = 16/34 (47%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGE+ Y C  C   F Q ++L  H+ IH 
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHR 36

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 5e-07
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T E+ ++CS C  A ++ S +  H R H GE+P   + 
Sbjct: 7   GTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS 45

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 13/41 (31%), Positives = 19/41 (46%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
             S + ER ++CS C + F   ++L  H   H G KP   
Sbjct: 3  SGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGP 43

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.3 bits (85), Expect = 2e-04
 Identities = 13/58 (22%), Positives = 18/58 (31%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG + ++C  C   F     L  H R                 H  EKP   S
Sbjct: 3   SGSSGTGERHYECSECGKAFIQKSTLSMHQRI----------------HRGEKPSGPS 44

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 54.1 bits (131), Expect = 7e-11
 Identities = 19/41 (46%), Positives = 23/41 (56%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C  A   T  L +H R+HTGEKP   
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 46.3 bits (111), Expect = 6e-08
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C  C   F+Q+  L  H+ +HT
Sbjct: 2   SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHT 36

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP++C  C  A  + + +  H R HTGE+P   + 
Sbjct: 7   GTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSS 45

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P++C  C + F     L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGP 43

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 17/58 (29%), Positives = 25/58 (43%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP++CK C   F+ +  L++H R                 HT EKP   S
Sbjct: 3   SGSSGTGEKPYECKECGKAFSQTTHLIQHQRV----------------HTGEKPSGPS 44

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 7e-11
 Identities = 19/41 (46%), Positives = 22/41 (53%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+P+ C  C  A  D   L +H RIHTGEKP   
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 14/34 (41%), Positives = 16/34 (47%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKP+ C  C   F+    L  HR IHT
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHT 36

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 7e-07
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP  C  C  A  +   +  H R HTGE+P   + 
Sbjct: 7   GTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSS 45

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 5e-06
 Identities = 13/43 (30%), Positives = 16/43 (37%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P  C  C + F     L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGP 43

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 16/58 (27%), Positives = 20/58 (34%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP  C  C   F+    L +H R                 HT EKP   S
Sbjct: 3   SGSSGTGEKPFDCIDCGKAFSDHIGLNQHRR----------------IHTGEKPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 7e-11
 Identities = 14/42 (33%), Positives = 18/42 (42%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD 167
              S TGE+P+QC  C      +  L +HLR H    P    
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS 44

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 6e-07
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKP+ C  C   F+ S SL  H   H 
Sbjct: 3   SGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHE 36

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.6 bits (101), Expect = 1e-06
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ TG KP +CK C   F+ S  L +H+R  H    P
Sbjct: 3  SGSSGTGEKPFQCKECGMNFSWSCSLFKHLR-SHERTDP 40

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 11/39 (28%), Positives = 15/39 (38%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP +C  C         +  H+RSH    P   + 
Sbjct: 7   GTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPSS 45

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 3e-06
 Identities = 11/43 (25%), Positives = 16/43 (37%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P +C  C   F    SL  H+ +H    P   
Sbjct: 1  GSSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 7e-11
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C+ C  A      L  H RIH+G+KP   
Sbjct: 3   SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 6e-08
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C +C   F+   SL  H+ IH+
Sbjct: 2   SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHS 36

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 4e-07
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP++CS+C  A      +  H R H+G++P   + 
Sbjct: 7   GTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSS 45

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 5e-06
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P++CSVC + F    SL  H   H+G KP   
Sbjct: 1  GSSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGP 43

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 13/39 (33%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ TG KP++C  C   F+    L  H R  H+ +KP
Sbjct: 3  SGSSGTGEKPYECSVCGKAFSHRQSLSVHQRI-HSGKKP 40

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 7e-11
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C+ C  +     +L  H RIHTGE P   
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 15/39 (38%), Positives = 23/39 (58%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP++CS C  + ++ S++  H R HTGE P   + 
Sbjct: 7   GTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS 45

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY C  C   F + + L  H+ IHT
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHT 36

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P++CS C + F   + L  H   HTG  P   
Sbjct: 1  GSSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGP 43

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 15/58 (25%), Positives = 20/58 (34%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP++C  C   F    +L  H R                 HT E P   S
Sbjct: 3   SGSSGTGEKPYECSDCGKSFIKKSQLHVHQR----------------IHTGENPSGPS 44

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 8e-11
 Identities = 14/42 (33%), Positives = 23/42 (54%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+PY+C+ C  +     +L+ H + HTGE+    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 8e-08
 Identities = 14/34 (41%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY C  C   FT  + L+ H+  HT
Sbjct: 3   SGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHT 36

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 16/37 (43%), Positives = 21/37 (56%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP+KCS C  +    S++R H + HTGER    
Sbjct: 7   GTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KCS C + F   + L+ H   HTG +    
Sbjct: 1  GSSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGP 43

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP+KC  C   FT    L  H +                 HT E+    S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKC----------------HTGERHSGPS 44

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 8e-11
 Identities = 20/41 (48%), Positives = 22/41 (53%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGERPY C  C  A  D   L +H +IHTGEKP   
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 14/35 (40%), Positives = 19/35 (54%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGE+PY C +C   FT  ++L  H+ IHT
Sbjct: 2   SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHT 36

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 4e-07
 Identities = 13/39 (33%), Positives = 22/39 (56%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T E+P+ C++C  A  + S +  H + HTGE+P   + 
Sbjct: 7   GTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSS 45

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
              S + ERP+ C+VC + F   ++L  H   HTG KP   
Sbjct: 2  SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGP 43

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG +P+ C  C   FT    L++H +                 HT EKP   S
Sbjct: 3   SGSSGTGERPYICTVCGKAFTDRSNLIKHQKI----------------HTGEKPSGPS 44

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.1 bits (131), Expect = 8e-11
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C  A      L +H R+H+GEKP   
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 6e-08
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY CD+C   F+   SL  H+ +H+
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHS 36

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 8e-07
 Identities = 13/39 (33%), Positives = 21/39 (53%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP++C +C  A    + +  H R H+GE+P   + 
Sbjct: 7   GTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS 45

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P++C VC + F   ASL  H   H+G KP   
Sbjct: 1  GSSGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGP 43

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 15/58 (25%), Positives = 22/58 (37%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP++C  C   F+    L +H R                 H+ EKP   S
Sbjct: 3   SGSSGTGEKPYECDVCRKAFSHHASLTQHQRV----------------HSGEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 54.0 bits (131), Expect = 8e-11
 Identities = 15/43 (34%), Positives = 22/43 (51%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD 167
           +   S TGE+P++C  C  +     +L RH  +HT EKP    
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPS 44

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 14/34 (41%), Positives = 18/34 (52%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKP+ CDIC   F   + L  H ++HT
Sbjct: 3   SGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHT 36

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 5e-07
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP KC IC  +    S++  H   HT E+P   
Sbjct: 7   GTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P KC +C + F   + L  H   HT  KP   
Sbjct: 1  GSSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGP 43

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 17/59 (28%), Positives = 20/59 (33%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP KC  C   F     L RH                   HT EKP   S
Sbjct: 2   SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSM----------------VHTAEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 53.7 bits (130), Expect = 8e-11
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY C  C  +      L +H R+H+GEKP   
Sbjct: 3   SGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C  C   F  ++ L  H+ +H+
Sbjct: 2   SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHS 36

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 12/44 (27%), Positives = 19/44 (43%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 67
               S + E+P+ C  C + F+  + L  H   H+G KP    
Sbjct: 1  GSSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPS 44

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 42.6 bits (101), Expect = 1e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
                  T EKP+ C  C  +    S +  H R H+GE+P   
Sbjct: 2   SSGSS-GTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGP 43

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A Length = 46

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 15/39 (38%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ TG KP+ CK C   F  +  L++H R  H+ EKP
Sbjct: 3  SGSSGTGEKPYNCKECGKSFRWASCLLKHQRV-HSGEKP 40

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 9e-11
 Identities = 21/41 (51%), Positives = 23/41 (56%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TG +PYQC  C  A   T KL RH R+HTGEKP   
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TG KPY C+ C   F+Q++ L  H+ +HT
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHT 36

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 15/39 (38%), Positives = 22/39 (56%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T  KP++C+ C  A  + SK+  H R HTGE+P   + 
Sbjct: 7   GTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS 45

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 12/41 (29%), Positives = 19/41 (46%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
             S +  +P++C+ C + F   + L  H   HTG KP   
Sbjct: 3  SGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGP 43

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 17/58 (29%), Positives = 24/58 (41%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP++C  C   F+ + +L RH R                 HT EKP   S
Sbjct: 3   SGSSGTGGKPYQCNECGKAFSQTSKLARHQRV----------------HTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 9e-11
 Identities = 17/41 (41%), Positives = 23/41 (56%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C+ C  +     +L  H +IHTGEKP   
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGP 43

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 16/35 (45%), Positives = 19/35 (54%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C IC   FT+ + L  H+ IHT
Sbjct: 2   SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHT 36

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 15/39 (38%), Positives = 24/39 (61%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP++CSIC  +  + S++  H + HTGE+P   + 
Sbjct: 7   GTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSS 45

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 67
               S + E+P++CS+C + F   + L  H   HTG KP    
Sbjct: 1  GSSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPS 44

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 16/58 (27%), Positives = 22/58 (37%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP++C  C   FT   +L  H +                 HT EKP   S
Sbjct: 3   SGSSGTGEKPYECSICGKSFTKKSQLHVHQQ----------------IHTGEKPSGPS 44

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 9e-11
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S + E+PY+C  C         L  H R+H GEK    
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 6e-08
 Identities = 9/34 (26%), Positives = 16/34 (47%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                + EKPY C+ C   + +  +L  H+ +H 
Sbjct: 3   SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHM 36

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.0 bits (105), Expect = 4e-07
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S E+P+KC  C +G+    +L  H   H G K    
Sbjct: 1  GSSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 11/37 (29%), Positives = 15/37 (40%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + EKP+KC  C         +  H R H GE+    
Sbjct: 7   GSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGP 43

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 12/59 (20%), Positives = 19/59 (32%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ +  KP+KC+ C   +     L  H R                 H  EK    S
Sbjct: 2   SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRV----------------HMGEKTSGPS 44

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 9e-11
 Identities = 22/42 (52%), Positives = 25/42 (59%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+PY+C  C  A   T KL RH RIHTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C+ C   F+Q++ L  H+ IHT
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHT 36

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 17/45 (37%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
                  T EKP+KC+ C  A  + SK+  H R HTGE+P   + 
Sbjct: 2   SSGS-SGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSS 45

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
              S + E+P+KC+ C + F   + L  H   HTG KP   
Sbjct: 2  SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGP 43

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP+KC  C   F+ + +L RH R                 HT EKP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRI----------------HTGEKPSGPS 44

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 53.7 bits (130), Expect = 9e-11
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S  GER ++C+ C           +H RIHTGEKP   
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 11/35 (31%), Positives = 16/35 (45%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                  GE+ + C  C   F Q+++   HR IHT
Sbjct: 2   SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHT 36

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S   ER H+CS C + F   ++   H   HTG KP   
Sbjct: 1  GSSGSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 13/37 (35%), Positives = 18/37 (48%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
              E+ H+CS C    ++ S    H R HTGE+P   
Sbjct: 7   GHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGP 43

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 12/40 (30%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 53 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
          +  ++  G + H+C  C   F  +   ++H R  HT EKP
Sbjct: 2  SSGSSGHGERGHRCSDCGKFFLQASNFIQHRRI-HTGEKP 40

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 9e-11
 Identities = 19/41 (46%), Positives = 21/41 (51%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGER Y+C+ C  A      L  H RIHTGEKP   
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 9e-08
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGE+ Y C  C   F + ++L  H+ IHT
Sbjct: 2   SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHT 36

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 6e-07
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T E+ ++CS C  A    S +  H R HTGE+P   + 
Sbjct: 7   GTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS 45

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + ER ++CS C + F   ++L  H   HTG KP   
Sbjct: 1  GSSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGP 43

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 14/58 (24%), Positives = 20/58 (34%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG + ++C  C   F     L+ H R                 HT EKP   S
Sbjct: 3   SGSSGTGERHYECSECGKAFARKSTLIMHQR----------------IHTGEKPSGPS 44

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 1e-10
 Identities = 18/41 (43%), Positives = 22/41 (53%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S +GE+P++C  C  A      L  HLRIHTGEKP   
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 5e-08
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 +GEKP+ C  C   F Q+  L SH  IHT
Sbjct: 2   SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHT 36

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S E+P KC  C + F+    L +H+  HTG KP   
Sbjct: 1  GSSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 4e-06
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + EKP KC  C  A  +   + +H+R HTGE+P   
Sbjct: 7   GSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGP 43

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 5e-05
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ +G KP KCK C   F  +  L  H+R                 HT EKP   S
Sbjct: 3   SGSSGSGEKPFKCKECGKAFRQNIHLASHLRI----------------HTGEKPSGPS 44

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 1e-10
 Identities = 17/42 (40%), Positives = 19/42 (45%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TG +PY C  C  A      L  H  IHTGEKP   
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 1e-08
 Identities = 14/35 (40%), Positives = 20/35 (57%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TG KPY C+ C   F+  +SL +H++IHT
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHT 36

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 5e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S +  +P+ C+ C + F   +SL  H   HTG KP   
Sbjct: 1  GSSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGP 43

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 1/45 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
                  T  KP+ C+ C  A    S +  H   HTGE+P   + 
Sbjct: 2   SSGS-SGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSS 45

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TGVKP+ C  C   F+    L  H                   HT EKP   S
Sbjct: 2   SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVI----------------HTGEKPSGPS 44

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 1e-10
 Identities = 20/41 (48%), Positives = 23/41 (56%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+CA C  A  D   L  H +IHTGEKP   
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 5e-08
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C  C   FT  ++L +H+ IHT
Sbjct: 2   SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHT 36

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.4 bits (106), Expect = 3e-07
 Identities = 14/39 (35%), Positives = 22/39 (56%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP++C+ C  A  + S +  H + HTGE+P   + 
Sbjct: 7   GTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSS 45

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 21/43 (48%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P++C+ C + F   ++L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGP 43

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP++C  C   FT    L  H +                 HT EKP   S
Sbjct: 3   SGSSGTGEKPYRCAECGKAFTDRSNLFTHQKI----------------HTGEKPSGPS 44

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 54.0 bits (131), Expect = 1e-10
 Identities = 24/55 (43%), Positives = 31/55 (56%), Gaps = 1/55 (1%)

Query: 134 RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSH-RLIHT 187
           R + C  CT A      LKRH R HT EKPY C +C+  FT+ + L  H + IH+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHS 55

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 53.3 bits (129), Expect = 2e-10
 Identities = 20/58 (34%), Positives = 27/58 (46%), Gaps = 1/58 (1%)

Query: 106 KPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHL-RIHTGEK 162
           +   C +C  A      ++ H RSHT E+PY C  C  A      L RH  +IH+G  
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNL 58

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 52.5 bits (127), Expect = 4e-10
 Identities = 21/60 (35%), Positives = 27/60 (45%)

Query: 34 RPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPE 93
          R   C VC R F     L+ H  +HT  KP+ C  C   FT    L+RH +  H+    E
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGNLGE 60

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1 Length = 60

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 18/73 (24%), Positives = 27/73 (36%), Gaps = 17/73 (23%)

Query: 62  KPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELS 121
           +   C+ C   F     L RH R                 HT+EKP+ C +C+ A     
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYR----------------SHTNEKPYPCGLCNRAFTRRD 44

Query: 122 KMRNHM-RSHTGE 133
            +  H  + H+G 
Sbjct: 45  LLIRHAQKIHSGN 57

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.7 bits (130), Expect = 1e-10
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C  A      L  H  IHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 9e-08
 Identities = 14/34 (41%), Positives = 20/34 (58%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY C+ C   F   ++L +H++IHT
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHT 36

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KC+ C + F+  ++L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP+KC+ C  A    S +  H   HTGE+P   
Sbjct: 7   GTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGP 43

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 8e-05
 Identities = 16/58 (27%), Positives = 19/58 (32%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP+KC  C   F     L  H                   HT EKP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRAHSNLTTHQVI----------------HTGEKPSGPS 44

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 17/42 (40%), Positives = 21/42 (50%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S +GE+PY+C  C         L  H RIHTGEKP   
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 +GEKPY C+ C   FTQ++ L +H  IHT
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHT 36

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 16/43 (37%), Positives = 21/43 (48%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S E+P+KC+ C + F   + L NH   HTG KP   
Sbjct: 1  GSSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGP 43

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 1/45 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
                  + EKP+KC+ C     + S + NH R HTGE+P   + 
Sbjct: 2   SSGSS-GSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSS 45

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 6e-05
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ +G KP+KC  C   FT +  L  H R                 HT EKP   S
Sbjct: 2   SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRI----------------HTGEKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C  A      L  H  IHTG+KP   
Sbjct: 3   SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGP 43

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 15/35 (42%), Positives = 20/35 (57%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C+ C   F+  +SL +H+ IHT
Sbjct: 2   SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHT 36

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 9e-07
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP++C+ C  A    S +  H   HTG++P   + 
Sbjct: 7   GTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS 45

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 14/44 (31%), Positives = 21/44 (47%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 67
               S + E+P++C+ C + F   +SL  H   HTG KP    
Sbjct: 1  GSSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPS 44

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ TG KP++C  C   F+    L  H    HT +KP
Sbjct: 3  SGSSGTGEKPYECNQCGKAFSVRSSLTTHQAI-HTGKKP 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 14/40 (35%), Positives = 19/40 (47%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYA 165
              S  GE+PY+C  C         L+ H+ IHTG  P +
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSS 41

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 17/34 (50%), Positives = 20/34 (58%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 GEKPY C+ C ARF Q   L++H LIHT
Sbjct: 2   SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHT 35

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 45.2 bits (108), Expect = 2e-07
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 136
              EKP+KC  C    V+++ +R H+  HTG  P 
Sbjct: 6   SGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 14/39 (35%), Positives = 18/39 (46%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
             +  G KP+KC+ C +RF     L  HV   HT   P
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLI-HTGSGP 39

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 40.2 bits (95), Expect = 8e-06
 Identities = 14/39 (35%), Positives = 19/39 (48%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPH 64
             S   E+P+KC  C   F  +A L+ H+  HTG  P 
Sbjct: 2  SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPS 40

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+P++C  C  +     +L  H RIHTGE P   
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 9e-08
 Identities = 13/35 (37%), Positives = 18/35 (51%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKP+ C  C   F+ ++ L  H+ IHT
Sbjct: 2   SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHT 36

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 7e-07
 Identities = 15/45 (33%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
                  T EKPH+C  C  +    S++  H R HTGE P   + 
Sbjct: 2   SSGSS-GTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSS 45

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 9e-06
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
              S + E+PH+C  C + F   + L  H   HTG  P   
Sbjct: 2  SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGP 43

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 16/58 (27%), Positives = 24/58 (41%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KPH+C+ C   F+ + +L+ H R                 HT E P   S
Sbjct: 3   SGSSGTGEKPHECRECGKSFSFNSQLIVHQRI----------------HTGENPSGPS 44

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 53.5 bits (129), Expect = 1e-10
 Identities = 15/45 (33%), Positives = 22/45 (48%), Gaps = 2/45 (4%)

Query: 125 NHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEKPYACD 167
           +   S TGE+P+ C    C +    + +L RH R H+G KP    
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPS 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 45.4 bits (108), Expect = 1e-07
 Identities = 15/36 (41%), Positives = 20/36 (55%), Gaps = 2/36 (5%)

Query: 154 HLRIHTGEKPYACD--ICHARFTQSNSLKSHRLIHT 187
                TGEKP+AC    C  RF++S+ L  HR  H+
Sbjct: 3   SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHS 38

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 45.0 bits (107), Expect = 2e-07
 Identities = 18/61 (29%), Positives = 24/61 (39%), Gaps = 18/61 (29%)

Query: 53  NHINTHTGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKC 110
           +  ++ TG KP  C +  C  RF+ S EL RH R                 H+  KP   
Sbjct: 2   SSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRR----------------SHSGVKPSGP 45

Query: 111 S 111
           S
Sbjct: 46  S 46

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 48

 Score = 40.7 bits (96), Expect = 7e-06
 Identities = 13/45 (28%), Positives = 18/45 (40%), Gaps = 2/45 (4%)

Query: 24 ARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P  C+   C   F     L  H  +H+GVKP   
Sbjct: 1  GSSGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGP 45

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 19/41 (46%), Positives = 22/41 (53%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY C  C  A     +L+ H RIHTGEKP   
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C+ C   F   + L+ H+ IHT
Sbjct: 2   SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHT 36

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 15/43 (34%), Positives = 21/43 (48%), Gaps = 1/43 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
                  T EKP+ C  C  A +  S+++ H R HTGE+P   
Sbjct: 2   SSGSS-GTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
              S + E+P+ C  C + F   + LQ H   HTG KP   
Sbjct: 2  SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGP 43

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 16/58 (27%), Positives = 21/58 (36%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP+ C+ C   F    +L  H R                 HT EKP   S
Sbjct: 3   SGSSGTGEKPYNCEECGKAFIHDSQLQEHQRI----------------HTGEKPSGPS 44

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE P+ C+ C         L  H +IHTGE+P   
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 16/34 (47%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGE P+ C  C   FT   +L  H+ IHT
Sbjct: 3   SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHT 36

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.6 bits (104), Expect = 6e-07
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T E P  CS C       + +  H + HTGERP   
Sbjct: 7   GTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 4e-06
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
             S + E P  CS C + F    +L  H   HTG +P   
Sbjct: 3  SGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGP 43

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 14/59 (23%), Positives = 20/59 (33%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG  P  C  C   FT    L+ H +                 HT E+P   S
Sbjct: 2   SSGSSGTGENPFICSECGKVFTHKTNLIIHQK----------------IHTGERPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 17/41 (41%), Positives = 22/41 (53%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C+ A      L +H + HTGEKP   
Sbjct: 3   SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.8 bits (112), Expect = 3e-08
 Identities = 15/35 (42%), Positives = 17/35 (48%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C +C   FTQ   L  H+  HT
Sbjct: 2   SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHT 36

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 16/44 (36%), Positives = 21/44 (47%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 67
               S + E+P++C VC + F   A L  H  THTG KP    
Sbjct: 1  GSSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPS 44

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 13/37 (35%), Positives = 22/37 (59%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP++C +C  A  + + +  H ++HTGE+P   
Sbjct: 7   GTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGP 43

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 16/39 (41%), Positives = 22/39 (56%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ TG KP++CK C   FT    L +H +  HT EKP
Sbjct: 3  SGSSGTGEKPYECKVCSKAFTQKAHLAQHQKT-HTGEKP 40

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C  A      L  H R HTGE   + 
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.5 bits (109), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY C+ C   F   ++L  H+  HT
Sbjct: 3   SGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHT 36

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP++C+ C  A    S +  H R+HTGE     
Sbjct: 7   GTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.5 bits (96), Expect = 9e-06
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P++C+ C++ F T ++L  H  THTG      
Sbjct: 1  GSSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSS 43

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.8 bits (89), Expect = 7e-05
 Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ TG KP++C  C+  F T   L+ H R  HT E  
Sbjct: 3  SGSSGTGEKPYECNECQKAFNTKSNLMVHQR-THTGESG 40

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 1e-10
 Identities = 17/42 (40%), Positives = 22/42 (52%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+P++C+ C  A      L  H R HTGEKP   
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.9 bits (110), Expect = 8e-08
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKP+ C  C   F   ++L  H+  HT
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHT 36

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.2 bits (103), Expect = 7e-07
 Identities = 16/37 (43%), Positives = 20/37 (54%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP +CS C  A    S +  H R+HTGE+P   
Sbjct: 7   GTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 16/43 (37%), Positives = 23/43 (53%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P +CS C++ F T ++L  H  THTG KP   
Sbjct: 1  GSSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGP 43

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.5 bits (96), Expect = 7e-06
 Identities = 17/59 (28%), Positives = 23/59 (38%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP +C  C+  F T   L+ H R                 HT EKP   S
Sbjct: 2   SSGSSGTGEKPFECSECQKAFNTKSNLIVHQR----------------THTGEKPSGPS 44

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 2e-10
 Identities = 16/42 (38%), Positives = 21/42 (50%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S  GE+PY C+ C  A      L  H+R H+GEKP   
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                  GEKPY C  C   F+  + L  H   H+
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHS 36

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.1 bits (105), Expect = 4e-07
 Identities = 14/43 (32%), Positives = 22/43 (51%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+ CS C + F + + L  H+ TH+G KP   
Sbjct: 1  GSSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
                    EKP+ CS C  A    S +  HMR+H+GE+P   
Sbjct: 2   SSGS-SGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGP 43

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 14/59 (23%), Positives = 23/59 (38%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++  G KP+ C  C   F++   L+ H+R                 H+ EKP   S
Sbjct: 2   SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMR----------------THSGEKPSGPS 44

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 2e-10
 Identities = 19/41 (46%), Positives = 21/41 (51%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY C  C  +      L RH RIHTGEKP   
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 8e-08
 Identities = 16/34 (47%), Positives = 18/34 (52%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY C+ C   F Q + L  HR IHT
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHT 36

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 4e-06
 Identities = 14/37 (37%), Positives = 21/37 (56%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP+ C+ C  + ++ S +  H R HTGE+P   
Sbjct: 7   GTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+ C+ C + F   + L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGP 43

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP+ C  C   F     L RH R                 HT EKP   S
Sbjct: 3   SGSSGTGEKPYICNECGKSFIQKSHLNRHRRI----------------HTGEKPSGPS 44

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 53.3 bits (129), Expect = 2e-10
 Identities = 15/42 (35%), Positives = 20/42 (47%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TG + ++C  C  A      L  H +IHTGEKP   
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-07
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TG K + C  C   FT+ ++L  H+ IHT
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHT 36

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 8e-07
 Identities = 12/39 (30%), Positives = 18/39 (46%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T  K  +C+ C  A    S +  H + HTGE+P   + 
Sbjct: 7   GTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSS 45

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 11/43 (25%), Positives = 18/43 (41%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S +  +  +C+ C + F   ++L  H   HTG KP   
Sbjct: 1  GSSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGP 43

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 2e-04
 Identities = 15/59 (25%), Positives = 20/59 (33%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG K  +C  C   FT    L  H +                 HT EKP   S
Sbjct: 2   SSGSSGTGGKHFECTECGKAFTRKSTLSMHQK----------------IHTGEKPSGPS 44

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 15/42 (35%), Positives = 18/42 (42%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TG +PY C  C  A      L  H R HTGE   + 
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.8 bits (107), Expect = 2e-07
 Identities = 12/35 (34%), Positives = 14/35 (40%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TG KPY C+ C   F   + L  H   HT
Sbjct: 2   SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHT 36

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 11/43 (25%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S +  +P+ C+ C + F++ + L  H  THTG      
Sbjct: 1  GSSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
                  T  KP+ C+ C  A    S +  H R+HTGE     
Sbjct: 2   SSGS-SGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSS 43

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 13/40 (32%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 53 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
          +  ++ TG+KP+ C  C   F +   L+ H R  HT E  
Sbjct: 2  SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTR-THTGESG 40

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD 167
           +   S +GE+P++C  C        +   H R H+GEKP    
Sbjct: 2   SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPS 44

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                +GEKP+ C+ C   F  ++   SH+  H+
Sbjct: 3   SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHS 36

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 14/37 (37%), Positives = 19/37 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + EKP KC  C       S+  +H RSH+GE+P   
Sbjct: 7   GSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 15/43 (34%), Positives = 21/43 (48%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S E+P KC  C +GF T +   +H  +H+G KP   
Sbjct: 1  GSSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGP 43

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)

Query: 53 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
          +  ++ +G KP KC+ C   F T+ +   H R  H+ EKP
Sbjct: 2  SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQR-SHSGEKP 40

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+PY+C+ C  A      L  H + HTGE+    
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 14/35 (40%), Positives = 17/35 (48%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C  C   FT+ + L  H+  HT
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHT 36

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 17/37 (45%), Positives = 20/37 (54%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP+KCS C  A    S +  H +SHTGER    
Sbjct: 7   GTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 5e-07
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KCS C + F   + L  H  +HTG +    
Sbjct: 1  GSSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGP 43

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 15/59 (25%), Positives = 21/59 (35%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP+KC  C   FT    L  H +                 HT E+    S
Sbjct: 2   SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQS----------------HTGERHSGPS 44

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 16/41 (39%), Positives = 19/41 (46%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C  A      L  H   H+GEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.4 bits (111), Expect = 6e-08
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C+ C   F   +SL  H+  H+
Sbjct: 2   SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHS 36

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 7e-07
 Identities = 15/43 (34%), Positives = 23/43 (53%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KC+ C + F+  +SL  H  TH+G KP   
Sbjct: 1  GSSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 9e-07
 Identities = 14/37 (37%), Positives = 20/37 (54%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP+KC+ C  A    S +  H  +H+GE+P   
Sbjct: 7   GTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGP 43

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 15/58 (25%), Positives = 19/58 (32%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP+KC  C   F     L  H                   H+ EKP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKAFRARSSLAIHQA----------------THSGEKPSGPS 44

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 19/42 (45%), Positives = 23/42 (54%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+PY+C  C  A      L +H RIHTGEKP   
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 4e-08
 Identities = 15/35 (42%), Positives = 17/35 (48%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C  C   F Q  +L  H+ IHT
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHT 36

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 9e-07
 Identities = 14/39 (35%), Positives = 21/39 (53%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP++C  C  A  + + +  H R HTGE+P   + 
Sbjct: 7   GTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS 45

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P++C  C + F   A+L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGP 43

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 8e-05
 Identities = 16/59 (27%), Positives = 22/59 (37%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP++C  C   F     L +H R                 HT EKP   S
Sbjct: 2   SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRI----------------HTGEKPSGPS 44

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C  A   +  L +H  +H+GE+P   
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 13/35 (37%), Positives = 17/35 (48%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C +C   F  S+ L  H  +H+
Sbjct: 2   SSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHS 36

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP+KC +C  A    S +  H   H+GERP   
Sbjct: 7   GTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 22/43 (51%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KC VC + F+  + L  H + H+G +P   
Sbjct: 1  GSSGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGP 43

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 5e-05
 Identities = 16/58 (27%), Positives = 23/58 (39%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP+KC+ C   F  S  LV+H                   H+ E+P   S
Sbjct: 3   SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSV----------------HSGERPSGPS 44

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 18/42 (42%), Positives = 24/42 (57%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGERP++C  C  +   +  L +H RIHTGEKP   
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGE+P+ C+ C   F QS  L  H+ IHT
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHT 36

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 17/43 (39%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + ERPHKC+ C + F   A L  H   HTG KP   
Sbjct: 1  GSSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGP 43

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 14/45 (31%), Positives = 23/45 (51%), Gaps = 1/45 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
                  T E+PHKC+ C  + ++ + +  H R HTGE+P   + 
Sbjct: 2   SSGS-SGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSS 45

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 18/59 (30%), Positives = 24/59 (40%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG +PHKC  C   F  S  L++H R                 HT EKP   S
Sbjct: 2   SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRI----------------HTGEKPSGPS 44

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 12/41 (29%), Positives = 17/41 (41%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S  GE+ ++C  C         L+ H  +H GEKP   
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
              EK  KC  CD    + S +R H   H GE+P   
Sbjct: 7   GMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 11/34 (32%), Positives = 18/34 (52%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 GEK + C  C   F+Q++SL+ H+ +H 
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHV 36

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 3e-07
 Identities = 14/41 (34%), Positives = 18/41 (43%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
             S   E+  KC  C+  F   +SL+ H N H G KP   
Sbjct: 3  SGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGP 43

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} Length = 46

 Score = 41.0 bits (97), Expect = 6e-06
 Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++  G K  KC+ C+  F+ +  L  H                   H  EKP   S
Sbjct: 3   SGSSGMGEKTWKCRECDMCFSQASSLRLHQNV----------------HVGEKPSGPS 44

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE PY+C  C  A    ++L  H R H GEKP   
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.8 bits (107), Expect = 2e-07
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGE PY C  C   F++   L SH+  H 
Sbjct: 2   SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHA 36

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T E P++C  C  A     ++ +H R+H GE+P   + 
Sbjct: 7   GTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSS 45

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E P++C  C + F     L +H  TH G KP   
Sbjct: 1  GSSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGP 43

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.3 bits (90), Expect = 6e-05
 Identities = 14/58 (24%), Positives = 21/58 (36%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG  P++C  C   F+   +L+ H R                 H  EKP   S
Sbjct: 3   SGSSGTGENPYECHECGKAFSRKYQLISHQR----------------THAGEKPSGPS 44

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.9 bits (128), Expect = 2e-10
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S +GE+PY+C+ C  A      L  H RIHTG +P   
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.3 bits (111), Expect = 5e-08
 Identities = 14/35 (40%), Positives = 16/35 (45%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 +GEKPY C  C   F +   L  HR IHT
Sbjct: 2   SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHT 36

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S E+P+KCS C + F     L  H   HTG +P   
Sbjct: 1  GSSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + EKP+KCS C  A    + +  H R HTG RP   
Sbjct: 7   GSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGP 43

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 6e-05
 Identities = 14/58 (24%), Positives = 19/58 (32%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ +G KP+KC  C   F     L  H R                 HT  +P   S
Sbjct: 3   SGSSGSGEKPYKCSECGKAFHRHTHLNEHRRI----------------HTGYRPSGPS 44

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 15/42 (35%), Positives = 22/42 (52%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S +GE+P++C  C        +L  H R+HTGEKP   
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 49.8 bits (120), Expect = 3e-09
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 +GEKP+ C+ C  RFTQ++ L SH+ +HT
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHT 36

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 9e-07
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S E+P KC  C + F   + L +H   HTG KP   
Sbjct: 1  GSSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
                  + EKP KC  C     + S++ +H R HTGE+P   
Sbjct: 2   SSGSS-GSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGP 43

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 18/59 (30%), Positives = 25/59 (42%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ +G KP KC+ C  RFT + +L  H R                 HT EKP   S
Sbjct: 2   SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRV----------------HTGEKPSGPS 44

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 19/42 (45%), Positives = 22/42 (52%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+PY+C  C         L RH RIHTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.7 bits (112), Expect = 4e-08
 Identities = 14/35 (40%), Positives = 18/35 (51%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C+ C   F  ++ L  H+ IHT
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHT 36

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 15/37 (40%), Positives = 19/37 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP+KC+ C       S +  H R HTGE+P   
Sbjct: 7   GTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 14/42 (33%), Positives = 21/42 (50%)

Query: 25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
              S + E+P+KC+ C + F+  + L  H   HTG KP   
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGP 43

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 18/59 (30%), Positives = 23/59 (38%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP+KC  C   F  +  L RH R                 HT EKP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRI----------------HTGEKPSGPS 44

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 2e-10
 Identities = 16/41 (39%), Positives = 18/41 (43%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S +GE+PY C  C         L  H R HTGEKP   
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 13/34 (38%), Positives = 19/34 (55%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                +GEKPY C+ C   F+Q + L +H+  HT
Sbjct: 3   SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHT 36

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 13/37 (35%), Positives = 20/37 (54%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + EKP+ C+ C     + S +  H R+HTGE+P   
Sbjct: 7   GSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
             S S E+P+ C+ C + F   + L  H  THTG KP   
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGP 43

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 14/39 (35%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ +G KP+ C  C   F+    L  H R  HT EKP
Sbjct: 3  SGSSGSGEKPYGCNECGKTFSQKSILSAHQR-THTGEKP 40

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-10
 Identities = 18/41 (43%), Positives = 21/41 (51%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C  +      L  H RIHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.3 bits (116), Expect = 9e-09
 Identities = 17/34 (50%), Positives = 20/34 (58%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY CD+CH  F   +SL  H+ IHT
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHT 36

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.3 bits (103), Expect = 8e-07
 Identities = 15/37 (40%), Positives = 20/37 (54%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP+KC +C  +    S +  H R HTGE+P   
Sbjct: 7   GTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 16/43 (37%), Positives = 22/43 (51%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KC VC + F+  +SL  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGP 43

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 8e-05
 Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP+KC  C   F     L  H R                 HT EKP   S
Sbjct: 3   SGSSGTGEKPYKCDVCHKSFRYGSSLTVHQRI----------------HTGEKPSGPS 44

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-10
 Identities = 15/41 (36%), Positives = 22/41 (53%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S  GE+PYQC+ C  +   +++L +H   HT EKP   
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 5e-07
 Identities = 13/34 (38%), Positives = 15/34 (44%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 GEKPY C  C   F+ S  L  H + HT
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHT 36

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
              EKP++CS C  +     ++  H  +HT E+P   
Sbjct: 7   GEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 14/43 (32%), Positives = 18/43 (41%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S   E+P++CS C + F     L  H  THT  KP   
Sbjct: 1  GSSGSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGP 43

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 1e-05
 Identities = 15/58 (25%), Positives = 21/58 (36%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++  G KP++C  C   F+ S  L +H                   HT EKP   S
Sbjct: 3   SGSSGEGEKPYQCSECGKSFSGSYRLTQHWIT----------------HTREKPSGPS 44

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-10
 Identities = 16/41 (39%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S +GE+P+QC  C         L  H R+HTGEKP   
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 15/35 (42%), Positives = 22/35 (62%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 +GEKP+ C+ C  RFTQ++ L SH+ +HT
Sbjct: 2   SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHT 36

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 3e-06
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + EKP +C  C     + S + +H R HTGE+P   
Sbjct: 7   GSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S E+P +C  C + F   + L +H   HTG KP   
Sbjct: 1  GSSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGP 43

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 7e-05
 Identities = 17/58 (29%), Positives = 23/58 (39%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ +G KP +C+ C  RFT +  L  H R                 HT EKP   S
Sbjct: 3   SGSSGSGEKPFQCEECGKRFTQNSHLHSHQRV----------------HTGEKPSGPS 44

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 52.5 bits (127), Expect = 3e-10
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S  G  PY+C+ C  +     +L  H R+HT EKP   
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 11/37 (29%), Positives = 17/37 (45%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
                P+KCS C+ +     ++  H R HT E+P   
Sbjct: 7   GAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 43.7 bits (104), Expect = 5e-07
 Identities = 10/34 (29%), Positives = 13/34 (38%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 G  PY C  C   F+    L  H+ +HT
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHT 36

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 43.3 bits (103), Expect = 9e-07
 Identities = 14/41 (34%), Positives = 17/41 (41%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
             S +   P+KCS CE+ F     L  H   HT  KP   
Sbjct: 3  SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGP 43

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 3e-06
 Identities = 17/58 (29%), Positives = 22/58 (37%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++  GV P+KC  CE  F+    L+ H R                 HT EKP   S
Sbjct: 3   SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQR----------------MHTREKPSGPS 44

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-10
 Identities = 18/42 (42%), Positives = 21/42 (50%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+PY+C  C         L RH  IHTGEKP   
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.9 bits (115), Expect = 2e-08
 Identities = 17/35 (48%), Positives = 20/35 (57%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C+ C   FTQ++ L  HR IHT
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHT 36

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 14/45 (31%), Positives = 20/45 (44%), Gaps = 1/45 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
                  T EKP+KC+ C     + S +  H   HTGE+P   + 
Sbjct: 2   SSGSS-GTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS 45

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.5 bits (96), Expect = 8e-06
 Identities = 14/42 (33%), Positives = 20/42 (47%)

Query: 25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
              S + E+P+KC+ C + F   + L  H   HTG KP   
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGP 43

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.2 bits (90), Expect = 6e-05
 Identities = 19/59 (32%), Positives = 24/59 (40%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP+KC  C   FT +  LVRH                   HT EKP   S
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGI----------------HTGEKPSGPS 44

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-10
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C         L RH  IHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.1 bits (113), Expect = 3e-08
 Identities = 15/35 (42%), Positives = 19/35 (54%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C  C   F +++ L  H+LIHT
Sbjct: 2   SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHT 36

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KC  C + F+  + L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 14/43 (32%), Positives = 17/43 (39%), Gaps = 1/43 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
                  T EKP+KC  C       S +  H   HTGE+P   
Sbjct: 2   SSGSS-GTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGP 43

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP+KC  C   F  +  L RH                   HT EKP   S
Sbjct: 3   SGSSGTGEKPYKCHECGKVFRRNSHLARHQLI----------------HTGEKPSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-10
 Identities = 13/41 (31%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S +G++PY+C  C         L +H R+HTGE+    
Sbjct: 3   SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 5e-07
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 +G+KPY C  C   F Q   L  H+ +HT
Sbjct: 2   SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHT 36

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 11/37 (29%), Positives = 19/37 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + +KP++C  C    +++  +  H R HTGER    
Sbjct: 7   GSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGP 43

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 12/44 (27%), Positives = 18/44 (40%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK 67
               S S ++P++C  C + F  I  L  H   HTG +     
Sbjct: 1  GSSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS 44

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 14/39 (35%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ +G KP++CK C   F   G L +H R  HT E+ 
Sbjct: 3  SGSSGSGKKPYECKECRKTFIQIGHLNQHKRV-HTGERS 40

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-10
 Identities = 17/41 (41%), Positives = 19/41 (46%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C         L  H RIHTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 16/35 (45%), Positives = 21/35 (60%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKPY C+ C   FTQ++ L +H+ IHT
Sbjct: 2   SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHT 36

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 15/43 (34%), Positives = 20/43 (46%), Gaps = 1/43 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
                  T EKP+KC+ C     + S + NH R HTG +P   
Sbjct: 2   SSGSS-GTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 16/42 (38%), Positives = 22/42 (52%)

Query: 25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
              S + E+P+KC+ C + F   + L NH   HTGVKP   
Sbjct: 2  SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGP 43

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 17/58 (29%), Positives = 21/58 (36%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP+KC  C   FT +  L  H R                 HT  KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLANHQRI----------------HTGVKPSGPS 44

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 52.6 bits (127), Expect = 3e-10
 Identities = 12/52 (23%), Positives = 23/52 (44%), Gaps = 1/52 (1%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHL-RIHTGEKPYACDICHARFTQ 175
           +   S +  +PY C  C         L  H+ ++HT E+P+ C +  +  + 
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 51.0 bits (123), Expect = 1e-09
 Identities = 17/51 (33%), Positives = 24/51 (47%), Gaps = 1/51 (1%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHI-NTHTGVKPHKCKYCESRFTT 75
             S S  +P+ C  C +GF     L  HI   HT  +PHKC+   S  ++
Sbjct: 3  SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS 53

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 41.0 bits (97), Expect = 5e-06
 Identities = 15/61 (24%), Positives = 26/61 (42%), Gaps = 15/61 (24%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSI 112
           +  ++ +  KP+ C+ C   F+              H    L  H++  HT E+PHKC +
Sbjct: 2   SSGSSGSVGKPYICQSCGKGFSRP-----------DH----LNGHIKQVHTSERPHKCQV 46

Query: 113 C 113
            
Sbjct: 47  W 47

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 54

 Score = 39.9 bits (94), Expect = 2e-05
 Identities = 10/35 (28%), Positives = 16/35 (45%), Gaps = 1/35 (2%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSH-RLIHT 187
                +  KPY C  C   F++ + L  H + +HT
Sbjct: 3   SGSSGSVGKPYICQSCGKGFSRPDHLNGHIKQVHT 37

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 52.5 bits (127), Expect = 3e-10
 Identities = 15/42 (35%), Positives = 21/42 (50%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TGE+P++C  C         L  H ++HTGEKP   
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 12/35 (34%), Positives = 18/35 (51%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKP+ C  C   F++ ++L  H  +HT
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHT 36

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 44.4 bits (106), Expect = 3e-07
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP KC  C       S +  H + HTGE+P   + 
Sbjct: 7   GTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSS 45

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 15/43 (34%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P KC  C +GF   ++L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGP 43

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A Length = 46

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 16/59 (27%), Positives = 21/59 (35%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TG KP KC  C   F+    L  H +                 HT EKP   S
Sbjct: 2   SSGSSGTGEKPFKCVECGKGFSRRSALNVHHK----------------LHTGEKPSGPS 44

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.5 bits (127), Expect = 3e-10
 Identities = 18/41 (43%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C         L RH  IHTGEKP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 17/34 (50%), Positives = 20/34 (58%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY C+ C   FTQ++ L  HR IHT
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHT 36

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.3 bits (98), Expect = 3e-06
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP+KC+ C     + S +  H   HTGE+P   + 
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KC+ C + F   + L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ TG KP+KC  C   FT +  L RH    HT EKP
Sbjct: 3  SGSSGTGEKPYKCNECGKVFTQNSHLARHRGI-HTGEKP 40

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 52.8 bits (126), Expect = 3e-10
 Identities = 15/55 (27%), Positives = 27/55 (49%)

Query: 108 HKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           + C  C     + S ++ H+R+HT  RPY C +C ++      L +H++     K
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 46.6 bits (110), Expect = 6e-08
 Identities = 16/52 (30%), Positives = 21/52 (40%)

Query: 136 YQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           Y C  C         LK+H+R HT  +PY C  C+  F    +L  H     
Sbjct: 2   YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKA 53

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 40.5 bits (94), Expect = 1e-05
 Identities = 21/56 (37%), Positives = 29/56 (51%), Gaps = 1/56 (1%)

Query: 36 HKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEK 91
          + C  C    K  + L+ HI THT V+P+ C YC   F T G L +H++    H K
Sbjct: 2  YICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMK-SKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 36.2 bits (83), Expect = 4e-04
 Identities = 11/49 (22%), Positives = 23/49 (46%), Gaps = 1/49 (2%)

Query: 86  KHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER 134
               +   L +H+R  HT  +P+ C+ C+++      +  HM+S    +
Sbjct: 9   IRXKKPSMLKKHIR-THTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A Length = 57

 Score = 35.5 bits (81), Expect = 7e-04
 Identities = 13/40 (32%), Positives = 24/40 (60%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVK 62
          L +H+++H++ RP+ C+ C   FKT  +L  H+ +    K
Sbjct: 17 LKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK 56

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 16/41 (39%), Positives = 21/41 (51%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+ Y+C  C        +L +H +IHTGEKP   
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 13/35 (37%), Positives = 19/35 (54%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEK Y C+ C   F++++ L  H+ IHT
Sbjct: 2   SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHT 36

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+ +KC+ C + F   + L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGP 43

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EK +KC+ C       S++  H + HTGE+P   + 
Sbjct: 7   GTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSS 45

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A Length = 46

 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 15/58 (25%), Positives = 23/58 (39%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG K +KC  C   F+ + +L +H +                 HT EKP   S
Sbjct: 3   SGSSGTGEKRYKCNECGKVFSRNSQLSQHQKI----------------HTGEKPSGPS 44

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 16/41 (39%), Positives = 22/41 (53%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+P++C  C  +      L +H R+HTGEKP   
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 46.0 bits (110), Expect = 7e-08
 Identities = 12/35 (34%), Positives = 16/35 (45%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKP+ C  C   + Q   L  H+ +HT
Sbjct: 2   SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHT 36

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 17/43 (39%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P KC  C + +     L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGP 43

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 14/45 (31%), Positives = 19/45 (42%), Gaps = 1/45 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
                  T EKP KC  C  +  +   +  H R HTGE+P   + 
Sbjct: 2   SSGSS-GTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSS 45

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.9 bits (89), Expect = 7e-05
 Identities = 16/58 (27%), Positives = 20/58 (34%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP KC  C   +     L +H R                 HT EKP   S
Sbjct: 3   SGSSGTGEKPFKCGECGKSYNQRVHLTQHQRV----------------HTGEKPSGPS 44

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 3e-10
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TG++PY+C  C         L RH  IHTGEKP   
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TG+KPY C+ C   FTQ++ L  HR IHT
Sbjct: 3   SGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHT 36

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 13/39 (33%), Positives = 20/39 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T +KP+KC+ C     + S +  H   HTGE+P   + 
Sbjct: 7   GTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS 45

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.6 bits (91), Expect = 4e-05
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + ++P+KC+ C + F   + L  H   HTG KP   
Sbjct: 1  GSSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGP 43

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 36.7 bits (86), Expect = 2e-04
 Identities = 17/39 (43%), Positives = 21/39 (53%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ TG KP+KC  C   FT +  L RH    HT EKP
Sbjct: 3  SGSSGTGKKPYKCNECGKVFTQNSHLARHRGI-HTGEKP 40

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.2 bits (126), Expect = 4e-10
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+P +C  C  A     +L  H R H  +K    
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 44.5 bits (106), Expect = 2e-07
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T EKP KC+ C  A    S++  H R+H  ++    
Sbjct: 7   GTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.2 bits (100), Expect = 2e-06
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
              S + E+P KC+ C + F   + L  H  TH   K    
Sbjct: 2  SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGP 43

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 2e-06
 Identities = 11/35 (31%), Positives = 13/35 (37%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TGEKP  C  C   F   + L  H+  H 
Sbjct: 2   SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHV 36

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 14/58 (24%), Positives = 19/58 (32%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP KC  C   F    +L+ H R                 H  +K    S
Sbjct: 3   SGSSGTGEKPCKCTECGKAFCWKSQLIMHQR----------------THVDDKHSGPS 44

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 52.1 bits (126), Expect = 4e-10
 Identities = 15/42 (35%), Positives = 19/42 (45%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S TG +PY C+ C        +L  H R HTG KP   
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 45.2 bits (108), Expect = 1e-07
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 TG KPY C  C   F+  + L  H+  HT
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHT 36

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 44.1 bits (105), Expect = 4e-07
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S +  +P+ CS C + F   + L  H  +HTGVKP   
Sbjct: 1  GSSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 43.3 bits (103), Expect = 8e-07
 Identities = 14/37 (37%), Positives = 18/37 (48%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T  KP+ CS C       S++  H RSHTG +P   
Sbjct: 7   GTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGP 43

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 16/59 (27%), Positives = 23/59 (38%), Gaps = 16/59 (27%)

Query: 53  NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
           +  ++ TGVKP+ C  C   F+   +L+ H R                 HT  KP   S
Sbjct: 2   SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQR----------------SHTGVKPSGPS 44

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 52.1 bits (126), Expect = 4e-10
 Identities = 15/41 (36%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S  GE+ Y+C  C      +  L+ H R+HTGEKP   
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 48.7 bits (117), Expect = 8e-09
 Identities = 14/34 (41%), Positives = 21/34 (61%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 GEK Y CD+C   F+QS+ L++H+ +HT
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHT 36

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 15/43 (34%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S   E+ +KC VC + F   + LQ H   HTG KP   
Sbjct: 1  GSSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 13/37 (35%), Positives = 19/37 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
              EK +KC +C     + S ++ H R HTGE+P   
Sbjct: 7   GMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGP 43

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 9e-05
 Identities = 16/58 (27%), Positives = 20/58 (34%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++  G K +KC  C   F+ S  L  H R                 HT EKP   S
Sbjct: 3   SGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRV----------------HTGEKPSGPS 44

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.8 bits (125), Expect = 5e-10
 Identities = 17/41 (41%), Positives = 20/41 (48%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE+PY+C  C         L RH R+HTG KP   
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 16/34 (47%), Positives = 20/34 (58%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGEKPY C+ C   FTQ++ L  HR +HT
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHT 36

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 14/39 (35%), Positives = 20/39 (51%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH 140
            T EKP+KC+ C     + S +  H R HTG +P   + 
Sbjct: 7   GTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSS 45

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.4 bits (93), Expect = 2e-05
 Identities = 14/43 (32%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + E+P+KC+ C + F   + L  H   HTG KP   
Sbjct: 1  GSSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGP 43

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.1 bits (87), Expect = 1e-04
 Identities = 18/58 (31%), Positives = 22/58 (37%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ TG KP+KC  C   FT +  L RH R                 HT  KP   S
Sbjct: 3   SGSSGTGEKPYKCNECGKVFTQNSHLARHRRV----------------HTGGKPSGPS 44

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 51.8 bits (125), Expect = 5e-10
 Identities = 15/40 (37%), Positives = 20/40 (50%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYA 165
              S  GE+PY+C  C  A      L  H+R+HTG  P +
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSS 41

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 47.6 bits (114), Expect = 2e-08
 Identities = 15/34 (44%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 GEKPY CD C   F+Q  SL  H  +HT
Sbjct: 2   SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHT 35

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 136
              EKP++C  C  A  +   +  H+R HTG  P 
Sbjct: 6   SGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.5 bits (93), Expect = 2e-05
 Identities = 13/39 (33%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
             +  G KP++C  C   F+  G L+ H+R  HT   P
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIR-VHTGSGP 39

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPH 64
             S   E+P++C  C + F    SL  HI  HTG  P 
Sbjct: 2  SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPS 40

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.7 bits (125), Expect = 6e-10
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S  G++ ++C  C      +  L  H RIHTGEKP   
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 47.5 bits (114), Expect = 2e-08
 Identities = 14/34 (41%), Positives = 19/34 (55%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 G+K + C+ C   FTQS+SL  H+ IHT
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHT 36

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.9 bits (102), Expect = 1e-06
 Identities = 12/37 (32%), Positives = 17/37 (45%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
              +K  KC+ C     + S +  H R HTGE+P   
Sbjct: 7   GAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 2e-06
 Identities = 13/43 (30%), Positives = 20/43 (46%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S + ++  KC+ C++ F   +SL  H   HTG KP   
Sbjct: 1  GSSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGP 43

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 17/58 (29%), Positives = 20/58 (34%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++  G K  KC  C+  FT S  L  H R                 HT EKP   S
Sbjct: 3   SGSSGAGKKLFKCNECKKTFTQSSSLTVHQRI----------------HTGEKPSGPS 44

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.4 bits (124), Expect = 6e-10
 Identities = 13/42 (30%), Positives = 18/42 (42%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S +GE+PY+C  C  A      L  H R H G    + 
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 45.6 bits (109), Expect = 1e-07
 Identities = 11/35 (31%), Positives = 14/35 (40%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 +GEKPY C+ C   F   + L  H   H 
Sbjct: 2   SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHA 36

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 44.4 bits (106), Expect = 2e-07
 Identities = 13/43 (30%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S E+P++C+ C + F   + L  H  TH GV     
Sbjct: 1  GSSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.6 bits (96), Expect = 7e-06
 Identities = 11/43 (25%), Positives = 18/43 (41%), Gaps = 1/43 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
                  + EKP++C+ C  A +  S +  H R+H G      
Sbjct: 2   SSGS-SGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSS 43

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 36.4 bits (85), Expect = 2e-04
 Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 1/40 (2%)

Query: 53 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
          +  ++ +G KP++C  C   F     L+ H R  H     
Sbjct: 2  SSGSSGSGEKPYECNECGKAFIWKSLLIVHER-THAGVSG 40

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 51.4 bits (124), Expect = 7e-10
 Identities = 14/41 (34%), Positives = 16/41 (39%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S +GERPY C  C         L  HL+ H  EK    
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 12/43 (27%), Positives = 17/43 (39%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S ERP+ C+ C + F   + L  H+  H   K    
Sbjct: 1  GSSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGP 43

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.7 bits (99), Expect = 3e-06
 Identities = 10/34 (29%), Positives = 15/34 (44%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                +GE+PY C+ C   F + + L  H   H 
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHF 36

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 39.8 bits (94), Expect = 2e-05
 Identities = 8/38 (21%), Positives = 17/38 (44%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCA 139
            + E+P+ C+ C       S +  H++ H  E+    +
Sbjct: 7   GSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPS 44

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 38.7 bits (91), Expect = 4e-05
 Identities = 11/58 (18%), Positives = 19/58 (32%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ +G +P+ C  C   F     L+ H++                 H  EK    S
Sbjct: 3   SGSSGSGERPYGCNECGKNFGRHSHLIEHLKR----------------HFREKSSGPS 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 51.0 bits (123), Expect = 8e-10
 Identities = 18/43 (41%), Positives = 22/43 (51%), Gaps = 1/43 (2%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLR-IHTGEKPYAC 166
           +   S TG++PY+C  C  A      L RH R  HTGEKP   
Sbjct: 2   SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 45.3 bits (108), Expect = 2e-07
 Identities = 15/35 (42%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSH-RLIHT 187
                TG+KPY C  C   F Q+ SL  H R  HT
Sbjct: 3   SGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHT 37

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 43.7 bits (104), Expect = 6e-07
 Identities = 17/40 (42%), Positives = 24/40 (60%)

Query: 53 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
          +  ++ TG KP++C  C   F  +  L+RH RY HT EKP
Sbjct: 2  SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKP 41

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 39.1 bits (92), Expect = 3e-05
 Identities = 13/38 (34%), Positives = 21/38 (55%), Gaps = 1/38 (2%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRS-HTGERPYQC 138
            T +KP++C  C  A ++ + +  H R  HTGE+P   
Sbjct: 7   GTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 47

 Score = 37.2 bits (87), Expect = 1e-04
 Identities = 13/44 (29%), Positives = 19/44 (43%), Gaps = 1/44 (2%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHI-NTHTGVKPHKC 66
               S + ++P++C  C + F    SL  H    HTG KP   
Sbjct: 1  GSSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGP 44

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 51.0 bits (123), Expect = 9e-10
 Identities = 12/41 (29%), Positives = 18/41 (43%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S TGE PY+C  C        +L  H + H+G+   + 
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 12/34 (35%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                TGE PY C  C   F++ + L SH+  H+
Sbjct: 3   SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHS 36

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 8/37 (21%), Positives = 17/37 (45%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            T E P++C  C        ++ +H ++H+G+     
Sbjct: 7   GTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 39.0 bits (92), Expect = 3e-05
 Identities = 11/41 (26%), Positives = 17/41 (41%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
             S + E P++C  C + F     L +H  TH+G      
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSS 43

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 37.9 bits (89), Expect = 7e-05
 Identities = 10/39 (25%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ TG  P++C  C   F+   +LV H +  H+ +  
Sbjct: 3  SGSSGTGENPYECCECGKVFSRKDQLVSHQKT-HSGQSG 40

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 51.0 bits (123), Expect = 1e-09
 Identities = 14/42 (33%), Positives = 19/42 (45%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
           +   S +  + +QC  C         L +H RIHTGEKP   
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 5e-07
 Identities = 10/35 (28%), Positives = 14/35 (40%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 +  K + C  C   FT  + L  H+ IHT
Sbjct: 2   SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHT 36

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 42.1 bits (100), Expect = 2e-06
 Identities = 15/43 (34%), Positives = 18/43 (41%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S  + H+C  C RGF   + L  H   HTG KP   
Sbjct: 1  GSSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 41.4 bits (98), Expect = 4e-06
 Identities = 14/40 (35%), Positives = 20/40 (50%), Gaps = 1/40 (2%)

Query: 53 NHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
          +  ++ +  K H+C  C   FT    L +H R  HT EKP
Sbjct: 2  SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRI-HTGEKP 40

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            +  K H+C  C       S +  H R HTGE+P   
Sbjct: 7   GSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGP 43

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 13/39 (33%), Positives = 18/39 (46%)

Query: 128 RSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              +GE PY+C+ C  A     +L  H R H GE   + 
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 42.9 bits (102), Expect = 9e-07
 Identities = 11/37 (29%), Positives = 18/37 (48%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + E P++CS C  A     ++ +H R+H GE     
Sbjct: 5   SSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.6 bits (96), Expect = 6e-06
 Identities = 11/32 (34%), Positives = 15/32 (46%)

Query: 156 RIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
              +GE PY C  C   F + + L SH+  H 
Sbjct: 3   SGSSGENPYECSECGKAFNRKDQLISHQRTHA 34

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 40.2 bits (95), Expect = 9e-06
 Identities = 12/39 (30%), Positives = 16/39 (41%)

Query: 28 KSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
             S E P++CS C + F     L +H  TH G      
Sbjct: 3  SGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSS 41

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A Length = 42

 Score = 37.5 bits (88), Expect = 8e-05
 Identities = 10/37 (27%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 56 NTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
          +  +G  P++C  C   F    +L+ H R  H  E  
Sbjct: 3  SGSSGENPYECSECGKAFNRKDQLISHQR-THAGESG 38

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 50.2 bits (121), Expect = 2e-09
 Identities = 14/41 (34%), Positives = 19/41 (46%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S +GERP++C  C         L  HLR+H+ EK    
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 43.7 bits (104), Expect = 6e-07
 Identities = 9/35 (25%), Positives = 17/35 (48%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 +GE+P+ C+ C   F + + L  H  +H+
Sbjct: 2   SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHS 36

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 42.5 bits (101), Expect = 1e-06
 Identities = 14/43 (32%), Positives = 19/43 (44%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S ERP KC+ C +GF   + L  H+  H+  K    
Sbjct: 1  GSSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 41.8 bits (99), Expect = 3e-06
 Identities = 10/37 (27%), Positives = 17/37 (45%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + E+P KC+ C       S +  H+R H+ E+    
Sbjct: 7   GSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGP 43

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 46

 Score = 37.5 bits (88), Expect = 1e-04
 Identities = 13/58 (22%), Positives = 19/58 (32%), Gaps = 16/58 (27%)

Query: 54  HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             ++ +G +P KC  C   F     L  H+R                 H+ EK    S
Sbjct: 3   SGSSGSGERPFKCNECGKGFGRRSHLAGHLRL----------------HSREKSSGPS 44

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 49.1 bits (118), Expect = 6e-09
 Identities = 12/39 (30%), Positives = 17/39 (43%)

Query: 128 RSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              +GE+P+ C+ C  A      L  H + H  EKP   
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 46.0 bits (110), Expect = 8e-08
 Identities = 12/37 (32%), Positives = 18/37 (48%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + EKP  CS C+ A    S +  H ++H  E+P   
Sbjct: 5   SSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 41.8 bits (99), Expect = 3e-06
 Identities = 14/39 (35%), Positives = 18/39 (46%)

Query: 28 KSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
             S E+P  CS CE+ F + + L  H  TH   KP   
Sbjct: 3  SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGP 41

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 40.2 bits (95), Expect = 1e-05
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 156 RIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
              +GEKP+ C  C   F+  + L  H+  H 
Sbjct: 3   SGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHA 34

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 14/55 (25%), Positives = 19/55 (34%), Gaps = 16/55 (29%)

Query: 57  THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS 111
             +G KP  C  CE  F++   L+ H +                 H  EKP   S
Sbjct: 4   GSSGEKPFGCSCCEKAFSSKSYLLVHQQ----------------THAEEKPSGPS 42

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 48.7 bits (117), Expect = 6e-09
 Identities = 13/38 (34%), Positives = 18/38 (47%)

Query: 128 RSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYA 165
              +G+R Y+C  C  +      L  H RIHTG  P +
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSS 40

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 39.9 bits (94), Expect = 1e-05
 Identities = 12/32 (37%), Positives = 15/32 (46%)

Query: 156 RIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
              +G++ Y C  C   F Q  SL  H  IHT
Sbjct: 3   SGSSGQRVYECQECGKSFRQKGSLTLHERIHT 34

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 37.6 bits (88), Expect = 9e-05
 Identities = 8/35 (22%), Positives = 16/35 (45%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 136
            + ++ ++C  C  +  +   +  H R HTG  P 
Sbjct: 5   SSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPS 39

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 41

 Score = 36.0 bits (84), Expect = 3e-04
 Identities = 11/37 (29%), Positives = 17/37 (45%), Gaps = 1/37 (2%)

Query: 56 NTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
          +  +G + ++C+ C   F   G L  H R  HT   P
Sbjct: 3  SGSSGQRVYECQECGKSFRQKGSLTLHERI-HTGSGP 38

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 50.5 bits (120), Expect = 9e-09
 Identities = 16/117 (13%), Positives = 38/117 (32%), Gaps = 13/117 (11%)

Query: 50  SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHK 109
           S + + +  TG    +CK C + + T  EL  H+                Y+  + +   
Sbjct: 6   SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNETG-----------HYRDDNHETDN 54

Query: 110 CSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHL--RIHTGEKPY 164
            +   ++      +         ++  +C +C ++      L  H+    H  +   
Sbjct: 55  NNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG 111

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 46.7 bits (110), Expect = 2e-07
 Identities = 18/116 (15%), Positives = 32/116 (27%), Gaps = 13/116 (11%)

Query: 26  HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRY 85
           +    +     +C  C   + T+  L  H+N  TG         ++         R    
Sbjct: 10  YGSIFTGASKFRCKDCSAAYDTLVELTVHMN-ETGHYRDDNHETDNNNPKRWSKPRKRSL 68

Query: 86  KHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHM--RSHTGERPYQCA 139
                          K   +K  KC  C ++   L  +  HM    H  +     +
Sbjct: 69  LEMEG----------KEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSGPSS 114

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 115

 Score = 37.8 bits (87), Expect = 4e-04
 Identities = 12/67 (17%), Positives = 21/67 (31%), Gaps = 1/67 (1%)

Query: 121 SKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK 180
           S  + +    TG   ++C  C+ A     +L  H+   TG              +  S  
Sbjct: 5   SSGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-TGHYRDDNHETDNNNPKRWSKP 63

Query: 181 SHRLIHT 187
             R +  
Sbjct: 64  RKRSLLE 70

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 48.3 bits (116), Expect = 1e-08
 Identities = 13/41 (31%), Positives = 17/41 (41%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              S T  + Y C  C  A    F L RH +IHT +   + 
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSS 43

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 41.8 bits (99), Expect = 3e-06
 Identities = 12/34 (35%), Positives = 15/34 (44%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                T  K Y C+ C   FT+   L  H+ IHT
Sbjct: 3   SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHT 36

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 44

 Score = 35.2 bits (82), Expect = 6e-04
 Identities = 11/39 (28%), Positives = 16/39 (41%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ T  K + C  C   FT    L RH +  HT +  
Sbjct: 3  SGSSGTDSKSYNCNECGKAFTRIFHLTRHQKI-HTRKSG 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 48.0 bits (115), Expect = 1e-08
 Identities = 11/40 (27%), Positives = 14/40 (35%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYA 165
              S  GE PY C  C  +      L  H R  +   P +
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 42.7 bits (101), Expect = 1e-06
 Identities = 12/34 (35%), Positives = 14/34 (41%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                 GE PY C  C   FTQ  SL  H+   +
Sbjct: 2   SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCS 35

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 38.0 bits (89), Expect = 7e-05
 Identities = 8/35 (22%), Positives = 13/35 (37%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPY 136
              E P+ C  C  +  +   +  H RS +   P 
Sbjct: 6   SGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPS 40

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.9 bits (86), Expect = 1e-04
 Identities = 11/39 (28%), Positives = 14/39 (35%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
             +  G  P+ C  C   FT  G L  H R   +   P
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRS-CSQSGP 39

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A Length = 42

 Score = 36.1 bits (84), Expect = 3e-04
 Identities = 10/40 (25%), Positives = 14/40 (35%)

Query: 26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHK 65
             S   E P+ C  C + F    SL  H  + +   P  
Sbjct: 2  SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSS 41

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 46.4 bits (111), Expect = 5e-08
 Identities = 12/42 (28%), Positives = 17/42 (40%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD 167
              S +GE+ + C  C         L+ H R+H GEK     
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPS 44

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 44.1 bits (105), Expect = 4e-07
 Identities = 10/34 (29%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                +GEK + CD C   F   ++L+ H+ +H 
Sbjct: 3   SGSSGSGEKSHTCDECGKNFCYISALRIHQRVHM 36

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 40.7 bits (96), Expect = 7e-06
 Identities = 13/43 (30%), Positives = 18/43 (41%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC 66
               S S E+ H C  C + F  I++L+ H   H G K    
Sbjct: 1  GSSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 38.7 bits (91), Expect = 3e-05
 Identities = 12/37 (32%), Positives = 16/37 (43%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC 138
            + EK H C  C      +S +R H R H GE+    
Sbjct: 7   GSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGP 43

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 46

 Score = 37.2 bits (87), Expect = 1e-04
 Identities = 12/39 (30%), Positives = 15/39 (38%), Gaps = 1/39 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
            ++ +G K H C  C   F     L  H R  H  EK 
Sbjct: 3  SGSSGSGEKSHTCDECGKNFCYISALRIHQRV-HMGEKC 40

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.5 bits (105), Expect = 3e-07
 Identities = 13/42 (30%), Positives = 17/42 (40%)

Query: 128 RSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC 169
            S    +   C  C     D + L RH   H+GEKPY+    
Sbjct: 5   SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 44.2 bits (104), Expect = 5e-07
 Identities = 11/42 (26%), Positives = 17/42 (40%)

Query: 101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT 142
                K   C IC     ++  +  H  SH+GE+PY     +
Sbjct: 6   SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS 47

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 Length = 48

 Score = 42.2 bits (99), Expect = 2e-06
 Identities = 10/42 (23%), Positives = 18/42 (42%)

Query: 28 KSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC 69
           S    +   C +C + F+ +  L  H  +H+G KP+     
Sbjct: 5  SSGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPS 46

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 43.1 bits (102), Expect = 9e-07
 Identities = 12/39 (30%), Positives = 20/39 (51%)

Query: 128 RSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC 166
              +GE+PY CA C     D  +L +H ++HT +   + 
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSS 41

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 Length = 42

 Score = 39.2 bits (92), Expect = 2e-05
 Identities = 13/32 (40%), Positives = 19/32 (59%)

Query: 156 RIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
              +GEKPY+C  C   F+ +N L  H+ +HT
Sbjct: 3   SGSSGEKPYSCAECKETFSDNNRLVQHQKMHT 34

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 43.1 bits (101), Expect = 2e-06
 Identities = 10/67 (14%), Positives = 18/67 (26%), Gaps = 7/67 (10%)

Query: 121 SKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK 180
                  + H G+R  +C+ C                 +  K   C+ C     Q  +L 
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALN 56

Query: 181 SHRLIHT 187
                 +
Sbjct: 57  KDEGNES 63

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 42.7 bits (100), Expect = 2e-06
 Identities = 11/73 (15%), Positives = 22/73 (30%), Gaps = 8/73 (10%)

Query: 93  ELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLK 152
              +  +  H  ++  KCS C         +     + +  +   C  C   S     L 
Sbjct: 5   SSGKRQKI-HLGDRSQKCSKC-------GIIFIRRSTLSRRKTPMCEKCRKDSCQEAALN 56

Query: 153 RHLRIHTGEKPYA 165
           +     +G+K   
Sbjct: 57  KDEGNESGKKTSG 69

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 39.3 bits (91), Expect = 5e-05
 Identities = 14/70 (20%), Positives = 22/70 (31%), Gaps = 8/70 (11%)

Query: 23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH 82
            +  K H  +R  KCS C   F          +T +  K   C+ C         L + 
Sbjct: 6  SGKRQKIHLGDRSQKCSKCGIIF-------IRRSTLSRRKTPMCEKCRKDSCQEAALNKD 58

Query: 83 VRYKHTHEKP 92
               + +K 
Sbjct: 59 EG-NESGKKT 67

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 73

 Score = 37.7 bits (87), Expect = 1e-04
 Identities = 14/88 (15%), Positives = 22/88 (25%), Gaps = 23/88 (26%)

Query: 49  ASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPH 108
            S       H G +  KC  C   F     L R                        K  
Sbjct: 4   GSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSRR-----------------------KTP 40

Query: 109 KCSICDYASVELSKMRNHMRSHTGERPY 136
            C  C   S + + +     + +G++  
Sbjct: 41  MCEKCRKDSCQEAALNKDEGNESGKKTS 68

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A Length = 37

 Score = 40.8 bits (96), Expect = 5e-06
 Identities = 13/33 (39%), Positives = 17/33 (51%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIH 186
             R  TG KP+ C  C   F++S+ L  HR  H
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRH 34

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 39.1 bits (91), Expect = 3e-05
 Identities = 10/39 (25%), Positives = 16/39 (41%)

Query: 125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKP 163
           +   S  GE P++C+ C         L +H R H  +  
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSG 40

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 38.3 bits (89), Expect = 6e-05
 Identities = 12/35 (34%), Positives = 13/35 (37%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
                  GE P+ C  C   FTQ N L  H   H 
Sbjct: 2   SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHA 36

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} Length = 44

 Score = 36.0 bits (83), Expect = 4e-04
 Identities = 13/41 (31%), Positives = 15/41 (36%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPH 64
               S + E P KCS C+R F     L  H  TH      
Sbjct: 1  GSSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGP 41

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.8 bits (89), Expect = 2e-04
 Identities = 16/63 (25%), Positives = 24/63 (38%), Gaps = 2/63 (3%)

Query: 26  HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRY 85
            L +        C +C   F +  SL+ HI          C  C+  FT++   + HV  
Sbjct: 65  RLLASKAISQFVCPLCLMPFSSSVSLKQHIRYTE--HTKVCPVCKKEFTSTDSALDHVCK 122

Query: 86  KHT 88
           KH 
Sbjct: 123 KHN 125

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1} Length = 129

 Score = 38.4 bits (88), Expect = 3e-04
 Identities = 16/74 (21%), Positives = 28/74 (37%), Gaps = 2/74 (2%)

Query: 109 KCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI 168
           K  I +   ++ S     + +      + C  C      +  LK+H+R    E    C +
Sbjct: 48  KTLIHNPQLLDESSYLYRLLASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPV 105

Query: 169 CHARFTQSNSLKSH 182
           C   FT ++S   H
Sbjct: 106 CKKEFTSTDSALDH 119

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 Length = 102

 Score = 36.7 bits (84), Expect = 7e-04
 Identities = 17/79 (21%), Positives = 31/79 (39%), Gaps = 5/79 (6%)

Query: 95  VRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRS-HTGER---PYQCAHCTYASPDTFK 150
             H +     E  ++C  C + + +L+    H+ S H        Y C  C + +     
Sbjct: 6   HHHNQQNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDA 65

Query: 151 LKRH-LRIHTGEKPYACDI 168
           L  H L+ H GE+ +   +
Sbjct: 66  LSEHNLKYHPGEENFKLTM 84

Structure Templates Detected by HHsearch

Original result of HHsearch against PDB70 database

ID	Length	Definition	Probability
Query	189
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	100.0
2i13_A	190	AART; DNA binding, zinc finger, DNA binding protei	100.0
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.97
1tf6_A	190	Protein (transcription factor IIIA); complex (tran	99.97
2gli_A	155	Protein (five-finger GLI); protein/DNA complex, tr	99.94
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.94
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.93
2dlq_A	124	GLI-kruppel family member HKR3; ZF-C2H2 domain, st	99.93
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.93
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.92
1ubd_C	124	Protein (YY1 zinc finger domain); transcription in	99.92
2jp9_A	119	Wilms tumor 1; DNA binding, nucleic acid recogniti	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.91
2rpc_A	155	Zinc finger protein ZIC 3; ZF-C2H2, zinc finger pr	99.91
2lt7_A	133	Transcriptional regulator kaiso; zinc finger, doub	99.9
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.87
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.87
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.86
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.86
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.84
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.83
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.83
2ee8_A	106	Protein ODD-skipped-related 2; zinc binding, ZF-C2	99.82
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.82
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.82
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.82
2dmd_A	96	Zinc finger protein 64, isoforms 1 and 2; ZNF338,	99.81
2dmi_A	115	Teashirt homolog 3; zinc finger protein 537, struc	99.81
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.8
1wjp_A	107	Zinc finger protein 295; ZF-C2H2 domain, zinc bind	99.79
1a1h_A	90	QGSR zinc finger peptide; complex (zinc finger/DNA	99.78
2kmk_A	82	Zinc finger protein GFI-1; tandem repeat zinc fing	99.78
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.77
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.76
2yt9_A	95	Zinc finger-containing protein 1; C2H2, structural	99.76
4gzn_C	60	ZFP-57, zinc finger protein 57; transcription-DNA	99.74
2csh_A	110	Zinc finger protein 297B; ZF-C2H2 domain, zinc fin	99.74
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.73
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.71
2ebt_A	100	Krueppel-like factor 5; C2H2-type zinc-finger, met	99.7
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.69
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.68
2wbs_A	89	Krueppel-like factor 4; transcription-DNA complex,	99.68
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.68
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.67
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.67
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.66
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.65
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.64
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.64
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.64
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.63
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.63
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.62
1llm_C	88	Chimera of ZIF23-GCN4; dimerization, DNA recogniti	99.62
2lce_A	74	B-cell lymphoma 6 protein; structural genomics, no	99.62
2dlk_A	79	Novel protein; ZF-C2H2 domain, zinc finger protein	99.61
2cot_A	77	Zinc finger protein 435; ADK_LID domain, zinc fing	99.6
1x6h_A	86	Transcriptional repressor CTCF; zinc finger protei	99.6
2wbt_A	129	B-129; zinc finger; 2.70A {Sulfolobus virus 1}	99.58
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.58
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.57
1x5w_A	70	Zinc finger protein 64, isoforms 1; ZNF338, nuclea	99.57
2j7j_A	85	Transcription factor IIIA; zinc finger module, alt	99.57
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.55
2ct1_A	77	Transcriptional repressor CTCF; CCCTC-BINDING fact	99.54
2ctd_A	96	Zinc finger protein 512; zinc binding, two ZF-C2H2	99.54
1x6e_A	72	Zinc finger protein 24; ZNF24, KOX17, ZNF191, zsca	99.53
2gqj_A	98	Zinc finger protein KIAA1196; ZF-C2H2 like domain,	99.52
2lv2_A	85	Insulinoma-associated protein 1; structural genomi	99.52
2ghf_A	102	ZHX1, zinc fingers and homeoboxes protein 1; C2H2	99.52
3uk3_C	57	Zinc finger protein 217; transcription factor, DNA	99.51
1bbo_A	57	Human enhancer-binding protein MBP-1; DNA-binding	99.5
2drp_A	66	Protein (tramtrack DNA-binding domain); protein-DN	99.47
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.47
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.45
2d9h_A	78	Zinc finger protein 692; ZF-C2H2 domain, structura	99.44
2adr_A	60	ADR1; transcription regulation, zinc finger,; NMR	99.43
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.42
1f2i_G	73	Fusion of N-terminal 17-MER peptide extension to Z	99.4
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.4
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.39
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.38
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.38
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.38
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.38
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.38
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.37
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.37
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.37
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.37
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.37
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.37
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.37
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.36
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.36
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.36
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.36
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.36
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.36
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.35
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.35
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.35
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.35
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.35
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.35
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.35
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.34
2ctu_A	73	Zinc finger protein 483; zinc finger domain, struc	99.34
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.34
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.33
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.33
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.33
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.33
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.33
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.32
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.32
2eod_A	66	TNF receptor-associated factor 4; zinc binding, NF	99.32
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.32
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.32
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.3
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.27
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.26
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2ej4_A	95	Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc bi	99.25
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.25
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.25
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2ytn_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.25
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.25
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.25
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.25
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.24
2em0_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2eq4_A	46	Zinc finger protein 224; C2H2, zinc finger domain,	99.24
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.24
2emx_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.24
2epz_A	46	Zinc finger protein 28 homolog; C2H2, zinc finger	99.24
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2ene_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.24
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2eml_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.24
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.24
2ely_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.24
2emm_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.24
2emf_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.24
2el4_A	46	Zinc finger protein 268; alternative splicing, DNA	99.24
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2ytq_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2eoq_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2emk_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.23
2eop_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2eps_A	54	POZ-, at HOOK-, and zinc finger-containing protein	99.23
2eme_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.23
2ep2_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2emy_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.23
2ytj_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.23
2em7_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.23
2ema_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2elz_A	46	Zinc finger protein 224; DNA-binding, metal-bindin	99.23
2em5_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.23
2eq0_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.23
2ytr_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.23
2eov_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2eoe_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.22
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.22
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.22
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.22
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.22
2em9_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2ytd_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.22
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2epw_A	46	Zinc finger protein 268; C2H2, zinc finger domain,	99.22
2enc_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.22
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.22
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.21
2ytk_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.21
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.21
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.21
2en1_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.21
2eoo_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.21
2en8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.21
2el6_A	46	Zinc finger protein 268; alternative splicing, DNA	99.21
2emp_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.21
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.2
2emh_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.2
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.2
2yso_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.2
2ysp_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.2
2ytm_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.2
2epa_A	72	Krueppel-like factor 10; transforming growth facto	99.19
2en6_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.19
2epx_A	47	Zinc finger protein 28 homolog; C2H2, zinc finger	99.19
2yu8_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.19
2ytg_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.19
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.18
2ep3_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.18
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.18
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2em8_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.18
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.18
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.17
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.17
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.17
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.16
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	99.16
2em2_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.16
1yui_A	54	GAGA-factor; complex (DNA-binding protein/DNA), ch	99.15
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.14
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.13
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	99.12
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	99.12
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	99.12
2el5_A	42	Zinc finger protein 268; alternative splicing, DNA	99.11
2epr_A	48	POZ-, at HOOK-, and zinc finger-containing protein	99.11
2yte_A	42	Zinc finger protein 473; ZF-C2H2, structural genom	99.1
2ep0_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2emj_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.1
2enf_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.1
2ep1_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2em4_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
1vd4_A	62	Transcription initiation factor IIE, alpha subunit	99.09
2ytp_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2eq2_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.09
2yti_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.09
2emg_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.09
2epq_A	45	POZ-, at HOOK-, and zinc finger-containing protein	99.09
2em3_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.09
2emi_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2eow_A	46	Zinc finger protein 347; ZF-C2H2, structural genom	99.08
2eq1_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.08
2ytf_A	46	Zinc finger protein 268; ZF-C2H2, structural genom	99.08
2yts_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.08
2ytt_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.08
2yth_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	99.08
2em6_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.08
2en9_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.08
2eon_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.07
2eof_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.07
2eoh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.07
2yrj_A	46	Zinc finger protein 473; C2H2-type zinc finger, st	99.07
2en7_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.06
2eor_A	46	Zinc finger protein 224; ZF-C2H2, structural genom	99.06
2yu5_A	44	Zinc finger protein 473; ZF-C2H2 domain, structura	99.05
2eoz_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2epc_A	42	Zinc finger protein 32; zinc finger domain, C2H2,	99.05
2eoj_A	44	Zinc finger protein 268; ZF-C2H2, structural genom	99.05
2emb_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.05
2ytb_A	42	Zinc finger protein 32; zinc-finger domain, C2H2,	99.04
2yto_A	46	Zinc finger protein 484; ZF-C2H2, structural genom	99.04
2eos_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.04
2eoy_A	46	Zinc finger protein 473; ZF-C2H2, structural genom	99.04
2enh_A	46	Zinc finger protein 28 homolog; ZF-C2H2, structura	99.03
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	99.03
2eq3_A	46	Zinc finger protein 347; C2H2, zinc finger domain,	99.02
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	99.01
2emz_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	99.01
2eou_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	99.01
2en2_A	42	B-cell lymphoma 6 protein; ZF-C2H2, structural gen	99.0
2en3_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.97
2epv_A	44	Zinc finger protein 268; C2H2, zinc finger domain,	98.97
2yrm_A	43	B-cell lymphoma 6 protein; ZF-C2H2, zinc binding,	98.97
2ent_A	48	Krueppel-like factor 15; zinc binding, transcripti	98.97
2eom_A	46	ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, s	98.96
2eox_A	44	Zinc finger protein 473; ZF-C2H2, structural genom	98.96
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.94
2epu_A	45	Zinc finger protein 32; C2H2, zinc finger domain,	98.93
2ept_A	41	Zinc finger protein 32; C2H2, zinc finger domain,	98.93
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.91
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.86
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.85
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.85
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.84
1p7a_A	37	BF3, BKLF, kruppel-like factor 3; classical zinc f	98.8
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.79
2elo_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.79
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.78
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.77
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.76
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.76
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.74
2d9k_A	75	FLN29 gene product; zinc finger, ZF-TRAF, structur	98.74
1njq_A	39	Superman protein; zinc-finger, peptide-zinc comple	98.73
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.73
2elx_A	35	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.71
1srk_A	35	Zinc finger protein ZFPM1; classical zinc finger,	98.7
1x6f_A	88	Zinc finger protein 462; zinc finger domain, KIAA1	98.7
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.7
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.67
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.65
2eln_A	38	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.65
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.6
1x3c_A	73	Zinc finger protein 292; DNA binding, nuclear prot	98.6
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.59
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.58
2elp_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.58
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.58
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.58
2elq_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2elt_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
2elr_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.57
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.56
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.55
2elv_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.55
1rim_A	33	E6APC2 peptide; E6-binding domain, zinc finger, hu	98.55
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.53
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.52
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.52
1bhi_A	38	CRE-BP1, ATF-2; CRE binding protein, transcription	98.51
1fv5_A	36	First zinc finger of U-shaped; CCHC, protein inter	98.51
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.91
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.5
2els_A	36	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.5
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.5
2elm_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	98.48
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.86
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.86
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.47
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.45
1ncs_A	47	Peptide M30F, transcriptional factor SWI5; DNA bin	98.42
1va1_A	37	Transcription factor SP1; C2H2 type zinc finger, D	98.4
3iuf_A	48	Zinc finger protein UBI-D4; structural genomics co	98.4
1ard_A	29	Yeast transcription factor ADR1; transcription reg	98.4
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.38
2m0d_A	30	Zinc finger and BTB domain-containing protein 17;	98.36
1rik_A	29	E6APC1 peptide; E6-binding domain, zinc finger, hu	98.36
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.36
2m0e_A	29	Zinc finger and BTB domain-containing protein 17;	98.36
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	98.35
1klr_A	30	Zinc finger Y-chromosomal protein; transcription;	98.35
2m0f_A	29	Zinc finger and BTB domain-containing protein 17;	98.34
1zfd_A	32	SWI5; DNA binding motif, zinc finger DNA binding d	98.31
1sp2_A	31	SP1F2; zinc finger, transcription activation; NMR	98.29
2kfq_A	32	FP1; protein, de novo protein; NMR {Synthetic}	98.26
2epp_A	66	POZ-, at HOOK-, and zinc finger-containing protein	98.25
2kvh_A	27	Zinc finger and BTB domain-containing protein 32;	98.24
2kvf_A	28	Zinc finger and BTB domain-containing protein 32;	98.24
2lvt_A	29	Zinc finger and BTB domain-containing protein 17;	97.55
1znf_A	27	31ST zinc finger from XFIN; zinc finger DNA bindin	98.2
2lvr_A	30	Zinc finger and BTB domain-containing protein 17;	97.48
2kvg_A	27	Zinc finger and BTB domain-containing protein 32;	98.18
1paa_A	30	Yeast transcription factor ADR1; transcription reg	98.14
2lvu_A	26	Zinc finger and BTB domain-containing protein 17;	97.35
2ab3_A	29	ZNF29; zinc finger protein, beta BETA alpha, RREII	97.88
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.84
1zw8_A	64	Zinc-responsive transcriptional regulator ZAP1; in	97.72
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	97.5
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	97.17
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.66
1zr9_A	124	Zinc finger protein 593; DNA binding, structural g	96.51
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	96.42
1zu1_A	127	DSRBP-ZFA, RNA binding protein ZFA; zinc finger pr	96.2
2e72_A	49	POGO transposable element with ZNF domain; zinc fi	95.67
2jsp_A	87	Transcriptional regulatory protein ROS; prokaryoti	94.77
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.76
3hcs_A	170	TNF receptor-associated factor 6; cross-brace, bet	94.73
3mjh_B	34	Early endosome antigen 1; protein-zinc finger comp	94.15
2elu_A	37	Zinc finger protein 406; ZFAT zinc finger 1, struc	93.28
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	91.33
2k5c_A	95	Uncharacterized protein PF0385; structural genomic	90.01
4ayb_P	48	DNA-directed RNA polymerase; transferase, multi-su	89.76
1fu9_A	36	U-shaped transcriptional cofactor; zinc-finger, be	88.27
2gmg_A	105	Hypothetical protein PF0610; winged-helix like pro	85.43
6rxn_A	46	Rubredoxin; electron transfer(iron-sulfur protein)	85.36
2jvx_A	28	NF-kappa-B essential modulator; CCHC classical zin	84.57
2yuc_A	76	TNF receptor-associated factor 4; ZF-TRAF, cystein	84.45
2djr_A	76	Zinc finger BED domain-containing protein 2; C2H2	83.88
2yrk_A	55	Zinc finger homeobox protein 4; structure genomics	83.56
3vk6_A	101	E3 ubiquitin-protein ligase hakai; HYB, phosphotyr	83.42
1wjv_A	79	Cell growth regulating nucleolar protein LYAR; DNA	83.12
1yuz_A	202	Nigerythrin; rubrythrin, rubredoxin, hemerythrin,	83.01
2k9h_A	57	Glycoprotein; hantavirus, zinc finger, CCHC, metal	82.68
2ct5_A	73	Zinc finger BED domain containing protein 1; DREF	81.74
1wir_A	121	Protein arginine N-methyltransferase 3; C2H2 zinc	81.22

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=3.7e-39  Score=221.44  Aligned_cols=166  Identities=38%  Similarity=0.704  Sum_probs=147.0

Q ss_pred             EeeeCCCcceeeechhHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhhhh
Q psy9067           6 YYWSDTTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRY   85 (189)
Q Consensus         6 ~~~c~~c~~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~   85 (189)
                      .|.|..|+ ..|.....|..|++.|.++++|.|+.|++.|.....|..|+..|.++++|.|+.|++.|.....|..|++.
T Consensus        21 ~~~C~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~   99 (190)
T 2i13_A           21 PYACPECG-KSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRTHTGEKPYKCPECGKSFSQRANLRAHQRT   99 (190)
T ss_dssp             -----------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHH
T ss_pred             CCcCCCCc-cccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHhcCCCCCccCcccCCccCCHHHHHHHHHh
Confidence            48899999 69999999999999999999999999999999999999999999999999999999999999999999985


Q ss_pred             hcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCccc
Q psy9067          86 KHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYA  165 (189)
Q Consensus        86 ~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  165 (189)
                                      +.++++|.|+.|++.|.+...|..|++.|.++++|.|++|++.|.....|..|+++|+++++|.
T Consensus       100 ----------------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~~~~  163 (190)
T 2i13_A          100 ----------------HTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNLHTHQRTHTGEKPYK  163 (190)
T ss_dssp             ----------------HHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE
T ss_pred             ----------------cCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHHHHHHHhcCCCCCeE
Confidence                            5567889999999999999999999999999999999999999999999999999999999999


Q ss_pred             CccchhccCCchHHHHHHhhhCC
Q psy9067         166 CDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       166 C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |++|++.|.+...|..|+++|+|
T Consensus       164 C~~C~~~f~~~~~L~~H~~~H~~  186 (190)
T 2i13_A          164 CPECGKSFSRRDALNVHQRTHTG  186 (190)
T ss_dssp             CTTTCCEESSHHHHHHHHTTC--
T ss_pred             CCCCCCccCCHHHHHHHHHhcCC
Confidence            99999999999999999999986

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=100.00  E-value=1.2e-34  Score=198.90  Aligned_cols=164  Identities=31%  Similarity=0.541  Sum_probs=152.5

Q ss_pred             Eeee--CCCcceeeechhHHHHHHhhCCCCCcccC--CCCCccccchhhHHHHHhhcCCCCCcccc--cCcccCCChhHH
Q psy9067           6 YYWS--DTTGYLRYHVMYLLARHLKSHSEERPHKC--SVCERGFKTIASLQNHINTHTGVKPHKCK--YCESRFTTSGEL   79 (189)
Q Consensus         6 ~~~c--~~c~~~~f~~~~~l~~h~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l   79 (189)
                      .|.|  ..|+ ..|.+...|..|++.|.++++|.|  +.|++.|.....|..|++.|.++++|.|.  .|++.|.....|
T Consensus        12 ~~~C~~~~C~-~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l   90 (190)
T 1tf6_A           12 RYICSFADCG-AAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLTHTGEKNFTCDSDGCDLRFTTKANM   90 (190)
T ss_dssp             CCBCSSTTTC-CBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTTTTTCCCEECCSSSCCCEESCHHHH
T ss_pred             ceeCCCCCCc-chhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHHccCCCceeCCCCCCCCccCCHHHH
Confidence            4778  6788 699999999999999999999999  88999999999999999999999999999  899999999999


Q ss_pred             HhhhhhhcCCCchhhhhhhhhcc-CCCCCccC--CCCCccccchHHHHhchhhcCCCCCccCcc--CCccCCChHHHHHH
Q psy9067          80 VRHVRYKHTHEKPELVRHVRYKH-THEKPHKC--SICDYASVELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRH  154 (189)
Q Consensus        80 ~~h~~~~h~~~~~~~~~~~~~~~-~~~~~~~C--~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H  154 (189)
                      ..|+..               .+ .+.++|.|  +.|++.|.+...|..|++.|.+++||.|++  |++.|.....|..|
T Consensus        91 ~~H~~~---------------~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~L~~H  155 (190)
T 1tf6_A           91 KKHFNR---------------FHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRH  155 (190)
T ss_dssp             HHHHHT---------------TSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHHHHHH
T ss_pred             HHHHHH---------------hcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHHHHHH
Confidence            999953               23 35678999  889999999999999999999999999988  99999999999999


Q ss_pred             HHHhhCCCcccCcc---chhccCCchHHHHHHhhhCC
Q psy9067         155 LRIHTGEKPYACDI---CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       155 ~~~h~~~~~~~C~~---C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +++|++   |.|..   |++.|.+...|..|+++|+|
T Consensus       156 ~~~H~~---~~C~~~~~C~~~f~~~~~l~~H~~~h~~  189 (190)
T 1tf6_A          156 EKVHAG---YPCKKDDSCSFVGKTWTLYLKHVAECHQ  189 (190)
T ss_dssp             HTSSCS---CCCCSTTTCCCCCSCHHHHHHHHTTCC-
T ss_pred             HHHhCC---CcCCCCCcCCCccccHHHHHHHHHhhcC
Confidence            999988   99999   99999999999999999987

>2i13_A AART; DNA binding, zinc finger, DNA binding protein-DNA complex; 1.96A {Mus musculus} SCOP: k.12.1.1 PDB: 1mey_C*

Probab=100.00  E-value=9.7e-35  Score=199.38  Aligned_cols=153  Identities=37%  Similarity=0.704  Sum_probs=120.5

Q ss_pred             hhHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhh
Q psy9067          20 MYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVR   99 (189)
Q Consensus        20 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~   99 (189)
                      ...|..|+..+.++++|.|+.|++.|.....|..|+..|.++++|.|+.|++.|.....|..|++.              
T Consensus         6 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~--------------   71 (190)
T 2i13_A            6 SSSSVAQAALEPGEKPYACPECGKSFSRSDHLAEHQRTHTGEKPYKCPECGKSFSDKKDLTRHQRT--------------   71 (190)
T ss_dssp             -------------------------CCSSHHHHHGGGCC---CCEECTTTCCEESSHHHHHHHHHH--------------
T ss_pred             hccchhhhhhcCCCCCCcCCCCccccCCHHHHHHHHHHcCCCCCccCCCcCchhCCHHHHHHHHHh--------------
Confidence            456888999999999999999999999999999999999999999999999999999999999985              


Q ss_pred             hccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHH
Q psy9067         100 YKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSL  179 (189)
Q Consensus       100 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l  179 (189)
                        +.++++|.|+.|++.|.+...|..|++.|.++++|.|++|++.|.+...|..|+++|+++++|.|++|++.|.+.+.|
T Consensus        72 --h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L  149 (190)
T 2i13_A           72 --HTGEKPYKCPECGKSFSQRANLRAHQRTHTGEKPYACPECGKSFSQLAHLRAHQRTHTGEKPYKCPECGKSFSREDNL  149 (190)
T ss_dssp             --HHCCCCEECTTTCCEESCHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHH
T ss_pred             --cCCCCCccCcccCCccCCHHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCCcccCCHHHH
Confidence              556778999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHHhhhCC
Q psy9067         180 KSHRLIHTP  188 (189)
Q Consensus       180 ~~H~~~h~~  188 (189)
                      ..|+++|++
T Consensus       150 ~~H~~~H~~  158 (190)
T 2i13_A          150 HTHQRTHTG  158 (190)
T ss_dssp             HHHHHHHHC
T ss_pred             HHHHHhcCC
Confidence            999999975

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.97  E-value=1.1e-30  Score=173.58  Aligned_cols=140  Identities=37%  Similarity=0.705  Sum_probs=125.9

Q ss_pred             CCcccCCCCCccccchhhHHHHHh---hcCCCCCccccc-----CcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCC
Q psy9067          33 ERPHKCSVCERGFKTIASLQNHIN---THTGVKPHKCKY-----CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTH  104 (189)
Q Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~---~~~~~~~~~C~~-----C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~  104 (189)
                      +.+|.|+.|++.|.+...|..|+.   .+.++++|.|+.     |++.|.....|..|++.                +.+
T Consensus         1 E~~~~C~~C~~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~----------------h~~   64 (155)
T 2gli_A            1 ETDCRWDGCSQEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRR----------------HTG   64 (155)
T ss_dssp             CCBCCBTTCCCBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHH----------------HHC
T ss_pred             CCcCCcCCCccccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHh----------------cCC
Confidence            346788889999999999999987   566778888764     34899999999999985                566


Q ss_pred             CCCccCCC--CCccccchHHHHhchhhcCCCCCccCcc--CCccCCChHHHHHHH-HHhhCCCcccCcc--chhccCCch
Q psy9067         105 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHL-RIHTGEKPYACDI--CHARFTQSN  177 (189)
Q Consensus       105 ~~~~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~--C~~~f~~~~  177 (189)
                      +++|.|++  |++.|.+...|..|++.|.++++|.|++  |++.|.+...|..|+ ++|.++++|.|++  |++.|.+.+
T Consensus        65 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~  144 (155)
T 2gli_A           65 EKPHKCTFEGCRKSYSRLENLKTHLRSHTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS  144 (155)
T ss_dssp             CCCCCCCSTTCCCCCSSHHHHHHHHHHTTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHH
T ss_pred             CCCccCCCCCCCCcccCHHHHHHHHHHcCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHH
Confidence            77899985  9999999999999999999999999998  999999999999998 7999999999998  999999999


Q ss_pred             HHHHHHhhhCC
Q psy9067         178 SLKSHRLIHTP  188 (189)
Q Consensus       178 ~l~~H~~~h~~  188 (189)
                      .|..|+++|||
T Consensus       145 ~L~~H~~~hhg  155 (155)
T 2gli_A          145 SLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHSCC
T ss_pred             HHHHHHHhhcC
Confidence            99999999987

>1tf6_A Protein (transcription factor IIIA); complex (transcription regulation/DNA), RNA polymerase III, transcription initiation, zinc finger protein; HET: DNA; 3.10A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1tf3_A

Probab=99.97  E-value=2.5e-30  Score=177.38  Aligned_cols=142  Identities=34%  Similarity=0.567  Sum_probs=131.5

Q ss_pred             CCCCcccC--CCCCccccchhhHHHHHhhcCCCCCccc--ccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCC
Q psy9067          31 SEERPHKC--SVCERGFKTIASLQNHINTHTGVKPHKC--KYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEK  106 (189)
Q Consensus        31 ~~~~~~~C--~~C~~~f~~~~~l~~H~~~~~~~~~~~C--~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~  106 (189)
                      ..+++|.|  +.|++.|.....|..|++.|.++++|.|  ..|++.|.....|..|++.                +.+++
T Consensus         8 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~----------------h~~~~   71 (190)
T 1tf6_A            8 VVYKRYICSFADCGAAYNKNWKLQAHLCKHTGEKPFPCKEEGCEKGFTSLHHLTRHSLT----------------HTGEK   71 (190)
T ss_dssp             --CCCCBCSSTTTCCBCSSHHHHHHHHHHHHCCCSSCCSSTTCCCCCSSHHHHHHHHTT----------------TTTCC
T ss_pred             CCCcceeCCCCCCcchhCCHHHHHHHHHhcCCCCCccCCCCCCChhhCCHHHHHHHHHH----------------ccCCC
Confidence            45678999  6899999999999999999999999999  8899999999999999984                66778


Q ss_pred             CccCC--CCCccccchHHHHhch-hhc-CCCCCccC--ccCCccCCChHHHHHHHHHhhCCCcccCcc--chhccCCchH
Q psy9067         107 PHKCS--ICDYASVELSKMRNHM-RSH-TGERPYQC--AHCTYASPDTFKLKRHLRIHTGEKPYACDI--CHARFTQSNS  178 (189)
Q Consensus       107 ~~~C~--~C~~~~~~~~~l~~H~-~~~-~~~~~~~C--~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~  178 (189)
                      +|.|+  .|++.|.+...|..|+ ..| .+.++|.|  ++|++.|.....|..|+++|+++++|.|++  |++.|.+.+.
T Consensus        72 ~~~C~~~~C~~~f~~~~~l~~H~~~~h~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~F~~~~~  151 (190)
T 1tf6_A           72 NFTCDSDGCDLRFTTKANMKKHFNRFHNIKICVYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSR  151 (190)
T ss_dssp             CEECCSSSCCCEESCHHHHHHHHHTTSSTTTSCCEECSSSSCEECSSHHHHHHHHGGGSSSCSSBCCSSSCCCBCSSHHH
T ss_pred             ceeCCCCCCCCccCCHHHHHHHHHHhcCCCcceeeCCCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCCchhcCHHH
Confidence            89999  8999999999999999 666 46789999  899999999999999999999999999988  9999999999


Q ss_pred             HHHHHhhhCC
Q psy9067         179 LKSHRLIHTP  188 (189)
Q Consensus       179 l~~H~~~h~~  188 (189)
                      |..|+++|+|
T Consensus       152 L~~H~~~H~~  161 (190)
T 1tf6_A          152 LKRHEKVHAG  161 (190)
T ss_dssp             HHHHHTSSCS
T ss_pred             HHHHHHHhCC
Confidence            9999999986

>2gli_A Protein (five-finger GLI); protein/DNA complex, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=2.1e-27  Score=157.72  Aligned_cols=139  Identities=32%  Similarity=0.568  Sum_probs=127.6

Q ss_pred             EEeeeCCCcceeeechhHHHHHHh---hCCCCCcccCCCC-----CccccchhhHHHHHhhcCCCCCccccc--CcccCC
Q psy9067           5 IYYWSDTTGYLRYHVMYLLARHLK---SHSEERPHKCSVC-----ERGFKTIASLQNHINTHTGVKPHKCKY--CESRFT   74 (189)
Q Consensus         5 ~~~~c~~c~~~~f~~~~~l~~h~~---~~~~~~~~~C~~C-----~~~f~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~   74 (189)
                      +.|.|..|+ ..|.+...|..|++   .+.++++|.|++|     ++.|.....|..|+..|.++++|.|+.  |++.|.
T Consensus         2 ~~~~C~~C~-~~f~~~~~L~~H~~~~h~h~~~~~~~C~~c~C~~c~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~   80 (155)
T 2gli_A            2 TDCRWDGCS-QEFDSQEQLVHHINSEHIHGERKEFVCHWGGCSRELRPFKAQYMLVVHMRRHTGEKPHKCTFEGCRKSYS   80 (155)
T ss_dssp             CBCCBTTCC-CBCSCHHHHHHHHHHHTSSSCSSCCCCCBTTCTTTTCCCSSHHHHHHHTHHHHCCCCCCCCSTTCCCCCS
T ss_pred             CcCCcCCCc-cccCCHHHHHHHHHhhccCCCCcceeCCCCCccchhhhhhhHHHHHHHHHhcCCCCCccCCCCCCCCccc
Confidence            357899999 69999999999998   6888899988753     499999999999999999999999986  999999


Q ss_pred             ChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCC--CCccccchHHHHhch-hhcCCCCCccCcc--CCccCCChH
Q psy9067          75 TSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHM-RSHTGERPYQCAH--CTYASPDTF  149 (189)
Q Consensus        75 ~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~-~~~~~~~~~~C~~--C~~~f~~~~  149 (189)
                      ....|..|++.                +.++++|.|+.  |++.|.....|..|+ +.|.++++|.|++  |++.|....
T Consensus        81 ~~~~l~~H~~~----------------h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~~~f~~~~  144 (155)
T 2gli_A           81 RLENLKTHLRS----------------HTGEKPYMCEHEGCSKAFSNASDRAKHQNRTHSNEKPYVCKLPGCTKRYTDPS  144 (155)
T ss_dssp             SHHHHHHHHHH----------------TTTCCCEECCSTTCCCEESSSSTTHHHHHHTTCSCCCEECCSTTTCCEESSHH
T ss_pred             CHHHHHHHHHH----------------cCCCCCeeCCCCCCCCccCCHHHHHHHHHHhcCCCCCeeCCCCCCccccCCHH
Confidence            99999999984                66778999998  999999999999998 8999999999988  999999999


Q ss_pred             HHHHHHHHhhC
Q psy9067         150 KLKRHLRIHTG  160 (189)
Q Consensus       150 ~l~~H~~~h~~  160 (189)
                      .|..|+++|+|
T Consensus       145 ~L~~H~~~hhg  155 (155)
T 2gli_A          145 SLRKHVKTVHG  155 (155)
T ss_dssp             HHHHHHHHSCC
T ss_pred             HHHHHHHhhcC
Confidence            99999998865

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.94  E-value=3.8e-26  Score=146.05  Aligned_cols=113  Identities=29%  Similarity=0.574  Sum_probs=104.1

Q ss_pred             CCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhh---cCCCCC
Q psy9067          59 TGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRS---HTGERP  135 (189)
Q Consensus        59 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~---~~~~~~  135 (189)
                      .++++|.|+.|++.|.....|..|++.                +.++++|.|+.|++.|.....|..|+..   +.++++
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~----------------h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~   66 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRK----------------HTGEKPFECPKCGKCYFRKENLLEHEARNCMNRSEQV   66 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHH----------------HSSCCSCBCTTTCCBCSSHHHHHHHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHh----------------CCCCCCeECCCCCchhcCHHHHHHHHhhhhcCCCCCC
Confidence            467789999999999999999999985                5667889999999999999999999885   577899


Q ss_pred             ccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhC
Q psy9067         136 YQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       136 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      |.|++|++.|.....|..|+++|+++++|.|++|++.|.+.+.|..|++..|
T Consensus        67 ~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H  118 (124)
T 2dlq_A           67 FTCSVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLH  118 (124)
T ss_dssp             EECSSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTS
T ss_pred             eECCCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHC
Confidence            9999999999999999999999999999999999999999999999998544

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.93  E-value=2.1e-26  Score=146.30  Aligned_cols=112  Identities=37%  Similarity=0.763  Sum_probs=105.1

Q ss_pred             CCCCCccccc--CcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCC--CCCccccchHHHHhchhhcCCCC
Q psy9067          59 TGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGER  134 (189)
Q Consensus        59 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~~~~~~  134 (189)
                      .++++|.|..  |++.|.....|..|++.                +.++++|.|+  .|++.|.+...|..|++.|.+++
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~----------------h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~   65 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRK----------------HTGEKPYQCDFKDCERRFSRSDQLKRHQRRHTGVK   65 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHH----------------HHTTCCEECCSTTCCCEESSHHHHHHHHHHHHCCC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHh----------------hCCCCCccCCCCCCcCccCCHHHHHHHHHHcCCCC
Confidence            4678899987  99999999999999985                5566789999  79999999999999999999999


Q ss_pred             CccCccCCccCCChHHHHHHHHHhhCCCcccC--ccchhccCCchHHHHHHhhh
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC--DICHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  186 (189)
                      +|.|++|++.|.....|..|+++|+++++|.|  +.||+.|.+.+.|..|+++|
T Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           66 PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            99999999999999999999999999999999  89999999999999999986

>2dlq_A GLI-kruppel family member HKR3; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.93  E-value=1.6e-25  Score=143.16  Aligned_cols=119  Identities=29%  Similarity=0.566  Sum_probs=108.4

Q ss_pred             CCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccC
Q psy9067          31 SEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKC  110 (189)
Q Consensus        31 ~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C  110 (189)
                      +++++|.|+.|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+..++.             +.++++|.|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-------------~~~~~~~~C   69 (124)
T 2dlq_A            3 SGSSGVECPTCHKKFLSKYYLKVHNRKHTGEKPFECPKCGKCYFRKENLLEHEARNCM-------------NRSEQVFTC   69 (124)
T ss_dssp             CCCSSCCCTTTCCCCSSHHHHHHHHHHHSSCCSCBCTTTCCBCSSHHHHHHHHHHCCC-------------CSCCCCEEC
T ss_pred             CCCCCCCCCCCCCcCCCHHHHHHHHHhCCCCCCeECCCCCchhcCHHHHHHHHhhhhc-------------CCCCCCeEC
Confidence            4678899999999999999999999999999999999999999999999999875322             356778999


Q ss_pred             CCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHH-HhhCCC
Q psy9067         111 SICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLR-IHTGEK  162 (189)
Q Consensus       111 ~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  162 (189)
                      +.|++.|.....|..|++.|.+++||.|++|++.|.....|..|++ .|.++.
T Consensus        70 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~~  122 (124)
T 2dlq_A           70 SVCQETFRRRMELRLHMVSHTGEMPYKCSSCSQQFMQKKDLQSHMIKLHSGPS  122 (124)
T ss_dssp             SSSCCEESSHHHHHHHHHHHSSSCSEECSSSCCEESSHHHHHHHHHHTSSCSS
T ss_pred             CCCCCccCCHHHHHHHHHHcCCCCCccCCCccchhCCHHHHHHHHHHHCCCCC
Confidence            9999999999999999999999999999999999999999999987 566543

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.93  E-value=1.4e-25  Score=143.43  Aligned_cols=112  Identities=38%  Similarity=0.769  Sum_probs=102.0

Q ss_pred             CCCCcccc--cCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCcc
Q psy9067          60 GVKPHKCK--YCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ  137 (189)
Q Consensus        60 ~~~~~~C~--~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~  137 (189)
                      ++++|.|+  .|++.|.....|..|++.                + +.++|.|+.|++.|.+...|..|++.|.++++|.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~----------------h-~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   64 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHT----------------H-GPRVHVCAECGKAFVESSKLKRHQLVHTGEKPFQ   64 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGG----------------G-SCCCEECTTTCCEESSHHHHHHHGGGTSCCCCEE
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHH----------------c-CCCCeECCCCCchhCCHHHHHHHHHHcCCCCCee
Confidence            35679999  899999999999999884                4 5678999999999999999999999999999999


Q ss_pred             Ccc--CCccCCChHHHHHHHHHhhCCCcccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         138 CAH--CTYASPDTFKLKRHLRIHTGEKPYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       138 C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |++  |++.|.....|..|+++|+++++|.|++  |++.|.+.++|..|+++|++
T Consensus        65 C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~  119 (124)
T 1ubd_C           65 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAK  119 (124)
T ss_dssp             CCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-
T ss_pred             CCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcc
Confidence            986  9999999999999999999999999964  99999999999999999986

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.92  E-value=4.6e-25  Score=146.39  Aligned_cols=120  Identities=29%  Similarity=0.594  Sum_probs=71.6

Q ss_pred             CCCcccCCCCCccccchhhHHHHHhh-cCCCCC--------cccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhcc
Q psy9067          32 EERPHKCSVCERGFKTIASLQNHINT-HTGVKP--------HKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKH  102 (189)
Q Consensus        32 ~~~~~~C~~C~~~f~~~~~l~~H~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~  102 (189)
                      .+.+|.|..|++.|.....|..|+.. |.+..+        |.|..|++.|.....|..|++.                +
T Consensus        22 ~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~----------------h   85 (155)
T 2rpc_A           22 AQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRV----------------H   85 (155)
T ss_dssp             TCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTCSSCCCCBTTCTTSSCCCSSHHHHHHHTHH----------------H
T ss_pred             hhcccccccCCcccCCHHHHHHHHHhhcCCCcccCCccccccCCCCcccccCCHHHHHHHHHh----------------c
Confidence            34456666666666666666666665 333332        5566666666666666666553                3


Q ss_pred             CCCCCccCCC--CCccccchHHHHhchhhcCCCCCccCcc--CCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         103 THEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       103 ~~~~~~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      .++++|.|+.  |++.|.....|..|++.|.++++|.|++  |++.|.....|..|+++|+++++|.|+
T Consensus        86 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~c~  154 (155)
T 2rpc_A           86 TGEKPFPCPFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTSDKSGPSS  154 (155)
T ss_dssp             HCCCSEECSCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTSCCCSCSC
T ss_pred             CCCCcccCCcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcCCCCCCCC
Confidence            3445566655  6666666666666666666666666664  666666666666666666666666553

>1ubd_C Protein (YY1 zinc finger domain); transcription initiation, initiator element, zinc finger protein, DNA- protein recognition; HET: DNA; 2.50A {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1znm_A*

Probab=99.92  E-value=6.8e-25  Score=140.29  Aligned_cols=116  Identities=34%  Similarity=0.663  Sum_probs=99.2

Q ss_pred             CCCcccCC--CCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCcc
Q psy9067          32 EERPHKCS--VCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHK  109 (189)
Q Consensus        32 ~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~  109 (189)
                      ++++|.|+  .|++.|.....|..|+..| ++++|.|..|++.|.....|..|++.                +.++++|.
T Consensus         2 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~h-~~~~~~C~~C~~~f~~~~~l~~H~~~----------------h~~~~~~~   64 (124)
T 1ubd_C            2 EPRTIACPHKGCTKMFRDNSAMRKHLHTH-GPRVHVCAECGKAFVESSKLKRHQLV----------------HTGEKPFQ   64 (124)
T ss_dssp             ---CEECCSTTCCCEESSHHHHHHHHGGG-SCCCEECTTTCCEESSHHHHHHHGGG----------------TSCCCCEE
T ss_pred             CCCcccCCCCCCcCccCCHHHHHHHHHHc-CCCCeECCCCCchhCCHHHHHHHHHH----------------cCCCCCee
Confidence            35678998  8999999999999999888 88899999999999999999999884                66778899


Q ss_pred             CCC--CCccccchHHHHhchhhcCCCCCccCc--cCCccCCChHHHHHHHHHhhCCCcc
Q psy9067         110 CSI--CDYASVELSKMRNHMRSHTGERPYQCA--HCTYASPDTFKLKRHLRIHTGEKPY  164 (189)
Q Consensus       110 C~~--C~~~~~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  164 (189)
                      |+.  |++.|.....|..|++.|.++++|.|+  .|++.|.+...|..|+++|++++++
T Consensus        65 C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H~~~k~~  123 (124)
T 1ubd_C           65 CTFEGCGKRFSLDFNLRTHVRIHTGDRPYVCPFDGCNKKFAQSTNLKSHILTHAKAKNN  123 (124)
T ss_dssp             CCSTTCCCEESCHHHHHHHHHHHHCCCCCCCCSTTCCCCCSSTTTTHHHHHHHC-----
T ss_pred             CCCCCCcCccCCHHHHHHHHHHhCCCCceECCCCCCCCccCCHHHHHHHHHHHcccccC
Confidence            986  999999999999999999999999996  5999999999999999999988775

>2jp9_A Wilms tumor 1; DNA binding, nucleic acid recognition, X-RAY; HET: DNA; NMR {Homo sapiens} PDB: 2jpa_A* 2prt_A*

Probab=99.91  E-value=5.8e-25  Score=139.55  Aligned_cols=112  Identities=38%  Similarity=0.770  Sum_probs=104.7

Q ss_pred             CCCCcccCCC--CCccccchhhHHHHHhhcCCCCCcccc--cCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCC
Q psy9067          31 SEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCK--YCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEK  106 (189)
Q Consensus        31 ~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~  106 (189)
                      .++++|.|++  |++.|.....|..|+..|.++++|.|+  .|++.|.....|..|++.                +.+++
T Consensus         2 ~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~----------------h~~~~   65 (119)
T 2jp9_A            2 SEKRPFMCAYPGCNKRYFKLSHLQMHSRKHTGEKPYQCDFKDCERRFSRSDQLKRHQRR----------------HTGVK   65 (119)
T ss_dssp             CSSCCBCCCSTTSCCCBSCHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHH----------------HHCCC
T ss_pred             CCCeeeeCCCCCCcchhCCHHHHHHHHHhhCCCCCccCCCCCCcCccCCHHHHHHHHHH----------------cCCCC
Confidence            4678999997  999999999999999999999999999  799999999999999985                55678


Q ss_pred             CccCCCCCccccchHHHHhchhhcCCCCCccC--ccCCccCCChHHHHHHHHHh
Q psy9067         107 PHKCSICDYASVELSKMRNHMRSHTGERPYQC--AHCTYASPDTFKLKRHLRIH  158 (189)
Q Consensus       107 ~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C--~~C~~~f~~~~~l~~H~~~h  158 (189)
                      +|.|+.|++.|.....|..|++.|.++++|.|  ++|++.|.....|..|+++|
T Consensus        66 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~L~~H~~~H  119 (119)
T 2jp9_A           66 PFQCKTCQRKFSRSDHLKTHTRTHTGEKPFSCRWPSCQKKFARSDELVRHHNMH  119 (119)
T ss_dssp             CEECTTTCCEESCHHHHHHHHHHHHTCCCEECCSTTCCCEESSHHHHHHHHHTC
T ss_pred             CccCCccCchhCCHHHHHHHHHHhcCCCCeeCCCCCCccccCCHHHHHHHHhcC
Confidence            89999999999999999999999999999999  89999999999999999875

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.91  E-value=9.4e-26  Score=145.48  Aligned_cols=103  Identities=24%  Similarity=0.382  Sum_probs=55.2

Q ss_pred             cCCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCcc
Q psy9067          58 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ  137 (189)
Q Consensus        58 ~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~  137 (189)
                      +.++++|.|++|++.|.....|..|+++                +.++++|.|++|++.|.....|..|+++|.+++||.
T Consensus        17 h~Gek~y~C~~C~k~F~~~~~L~~H~~~----------------H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~   80 (133)
T 2lt7_A           17 VDGRVYYICIVCKRSYVCLTSLRRHFNI----------------HSWEKKYPCRYCEKVFPLAEYRTKHEIHHTGERRYQ   80 (133)
T ss_dssp             ETTEEEEEETTTCCEESCHHHHHHHHHH----------------HHCCSCEECSSSSCEESSHHHHHHHHHHHHTCCCEE
T ss_pred             cCCCcCeECCCCCCCcCCHHHHHHHHHH----------------cCCCCCeeCCccCeecccccchhhhccccCCCcccc
Confidence            3444445555555555555555555442                334444555555555555555555555555555555


Q ss_pred             CccCCccCCChHHHHHHHHHhhCC------CcccCccchhccCCc
Q psy9067         138 CAHCTYASPDTFKLKRHLRIHTGE------KPYACDICHARFTQS  176 (189)
Q Consensus       138 C~~C~~~f~~~~~l~~H~~~h~~~------~~~~C~~C~~~f~~~  176 (189)
                      |++|++.|.....|..|+++|+++      ++|+|.+|++.|...
T Consensus        81 C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           81 CLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             ESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            555555555555555555555443      346777777766544

>2rpc_A Zinc finger protein ZIC 3; ZF-C2H2, zinc finger protein of the cerebellum 3, disease mutation, DNA-binding, metal-binding, nucleus, polymorphism; NMR {Homo sapiens}

Probab=99.91  E-value=1.3e-24  Score=144.27  Aligned_cols=123  Identities=33%  Similarity=0.558  Sum_probs=106.9

Q ss_pred             CCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccC
Q psy9067          59 TGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC  138 (189)
Q Consensus        59 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C  138 (189)
                      ....+|.|..|++.|.....|..|++.+|....+.       .......|.|+.|++.|.+...|..|++.|.++++|.|
T Consensus        21 ~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~-------~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   93 (155)
T 2rpc_A           21 EAQLSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQ-------NNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKPFPC   93 (155)
T ss_dssp             TTCCSSSCCCCCCCBSSHHHHHHHHHTTTSCCTTC-------SSCCCCBTTCTTSSCCCSSHHHHHHHTHHHHCCCSEEC
T ss_pred             hhhcccccccCCcccCCHHHHHHHHHhhcCCCccc-------CCccccccCCCCcccccCCHHHHHHHHHhcCCCCcccC
Confidence            35668999999999999999999998744432110       00111237999999999999999999999999999999


Q ss_pred             cc--CCccCCChHHHHHHHHHhhCCCcccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         139 AH--CTYASPDTFKLKRHLRIHTGEKPYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       139 ~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .+  |++.|.....|..|+++|+++++|.|++  |++.|.+.+.|..|+++|++
T Consensus        94 ~~~~C~~~f~~~~~L~~H~~~h~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~  147 (155)
T 2rpc_A           94 PFPGCGKIFARSENLKIHKRTHTGEKPFKCEFEGCDRRFANSSDRKKHMHVHTS  147 (155)
T ss_dssp             SCTTTCCEESCHHHHHHHHTTTCSSCSBCCSSTTCCCCBSSHHHHHHSSTTTTS
T ss_pred             CcCCCCCccCCHHHHHHHHHhhCCCCCccCCCCCCCCccCCHHHHHHHHHHhcC
Confidence            98  9999999999999999999999999997  99999999999999999986

>2lt7_A Transcriptional regulator kaiso; zinc finger, double helix, metal binding protein-DNA complex; HET: DNA; NMR {Homo sapiens} PDB: 4f6m_A* 4f6n_A*

Probab=99.90  E-value=4.2e-25  Score=142.40  Aligned_cols=109  Identities=24%  Similarity=0.413  Sum_probs=95.0

Q ss_pred             HHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccC
Q psy9067          24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHT  103 (189)
Q Consensus        24 ~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~  103 (189)
                      ..|..++.|+++|.|++|++.|.....|..|++.|.++++|.|+.|++.|.....|..|+++                +.
T Consensus        11 ~h~~~~h~Gek~y~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~----------------H~   74 (133)
T 2lt7_A           11 DHYELIVDGRVYYICIVCKRSYVCLTSLRRHFNIHSWEKKYPCRYCEKVFPLAEYRTKHEIH----------------HT   74 (133)
T ss_dssp             SEEEEEETTEEEEEETTTCCEESCHHHHHHHHHHHHCCSCEECSSSSCEESSHHHHHHHHHH----------------HH
T ss_pred             hhceeecCCCcCeECCCCCCCcCCHHHHHHHHHHcCCCCCeeCCccCeecccccchhhhccc----------------cC
Confidence            34556778889999999999999999999999999999999999999999999999999884                67


Q ss_pred             CCCCccCCCCCccccchHHHHhchhhcCCC------CCccCccCCccCCCh
Q psy9067         104 HEKPHKCSICDYASVELSKMRNHMRSHTGE------RPYQCAHCTYASPDT  148 (189)
Q Consensus       104 ~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~------~~~~C~~C~~~f~~~  148 (189)
                      ++++|.|++||+.|.....|..|++.++++      ++|.|.+|++.|...
T Consensus        75 ~~k~~~C~~C~k~F~~~~~L~~H~~~hh~~~p~~~~k~~~C~~C~k~~~~~  125 (133)
T 2lt7_A           75 GERRYQCLACGKSFINYQFMSSHIKSVHSQDPSGDSKLYRLHPCRSLQIRQ  125 (133)
T ss_dssp             TCCCEEESSSCCEESSHHHHHHHHHHHTCCCTTSSSCCEEECCCCSSCCCC
T ss_pred             CCccccCCCCCCCcCCHHHHHHHhHHhcCCCCCCCCCCeecCCCCchhhhc
Confidence            778899999999999999999999888765      458899999888754

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.87  E-value=1.4e-22  Score=120.18  Aligned_cols=82  Identities=35%  Similarity=0.662  Sum_probs=79.3

Q ss_pred             CccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhh
Q psy9067         107 PHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       107 ~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  186 (189)
                      +|.|+.|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.+.++|..|+++|
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H   80 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLIHSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCGKAFSQSSNLITHSRKH   80 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTSCEESSHHHHHHHHHHH
T ss_pred             CccCCCCcccccCchhHHHHHHHcCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcchhhCChHHHHHHHHhh
Confidence            58999999999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             CC
Q psy9067         187 TP  188 (189)
Q Consensus       187 ~~  188 (189)
                      +|
T Consensus        81 ~g   82 (82)
T 2kmk_A           81 TG   82 (82)
T ss_dssp             C-
T ss_pred             CC
Confidence            86

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.87  E-value=2.7e-22  Score=122.46  Aligned_cols=87  Identities=40%  Similarity=0.827  Sum_probs=83.7

Q ss_pred             cCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHH
Q psy9067         102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKS  181 (189)
Q Consensus       102 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~  181 (189)
                      ..++++|.|+.|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.+.+.|..
T Consensus         3 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~   82 (96)
T 2dmd_A            3 SGSSGPHKCEVCGKCFSRKDKLKTHMRCHTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQICPYASRNSSQLTV   82 (96)
T ss_dssp             CCCCCCCCBTTTTBCCCCHHHHHHHGGGCCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECSSSSCEESSHHHHHH
T ss_pred             CCCCcCeECCCCCCccCCHHHHHHHHHhcCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHH
Confidence            45678899999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHhhhCC
Q psy9067         182 HRLIHTP  188 (189)
Q Consensus       182 H~~~h~~  188 (189)
                      |+++|++
T Consensus        83 H~~~h~~   89 (96)
T 2dmd_A           83 HLRSHTG   89 (96)
T ss_dssp             HHTTCCS
T ss_pred             HHHHhcC
Confidence            9999986

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.86  E-value=4.3e-22  Score=120.12  Aligned_cols=84  Identities=40%  Similarity=0.814  Sum_probs=80.6

Q ss_pred             CCCccCC--CCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHH
Q psy9067         105 EKPHKCS--ICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSH  182 (189)
Q Consensus       105 ~~~~~C~--~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H  182 (189)
                      +++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.+.+.|..|
T Consensus         2 ~k~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H   81 (90)
T 1a1h_A            2 ERPYACPVESCDRRFSQSGSLTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRH   81 (90)
T ss_dssp             -CCEECCSSSCCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHH
T ss_pred             CCceECCCCCCCCccCCHHHHHHHHHHhCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCccCCCCCchhCCHHHHHHH
Confidence            5689998  59999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HhhhCC
Q psy9067         183 RLIHTP  188 (189)
Q Consensus       183 ~~~h~~  188 (189)
                      +++|++
T Consensus        82 ~~~H~~   87 (90)
T 1a1h_A           82 TKIHLR   87 (90)
T ss_dssp             HGGGGC
T ss_pred             HHHhcc
Confidence            999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.86  E-value=1.1e-21  Score=121.95  Aligned_cols=88  Identities=33%  Similarity=0.599  Sum_probs=84.0

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHH
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK  180 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  180 (189)
                      ....+++|.|+.|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|.+...|.
T Consensus        11 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~   90 (106)
T 2ee8_A           11 PSKTKKEFICKFCGRHFTKSYNLLIHERTHTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKCQECGKGFCQSRTLA   90 (106)
T ss_dssp             CCCCCCCCBCSSSCCBCSSHHHHHHHHHHHCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSCSSSCCCCSSHHHHH
T ss_pred             CcCCCcCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeECCCcCCcccCHHHHH
Confidence            34567789999999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhCC
Q psy9067         181 SHRLIHTP  188 (189)
Q Consensus       181 ~H~~~h~~  188 (189)
                      .|+++|++
T Consensus        91 ~H~~~H~~   98 (106)
T 2ee8_A           91 VHKTLHMQ   98 (106)
T ss_dssp             HHHHHTTS
T ss_pred             HHHHHhCC
Confidence            99999976

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.84  E-value=4.2e-21  Score=116.91  Aligned_cols=86  Identities=29%  Similarity=0.648  Sum_probs=81.1

Q ss_pred             CCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCC--CcccCccchhccCCchHHH
Q psy9067         103 THEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE--KPYACDICHARFTQSNSLK  180 (189)
Q Consensus       103 ~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~--~~~~C~~C~~~f~~~~~l~  180 (189)
                      .++++|.|+.|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|+++  ++|.|++|++.|.+.+.|.
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~~C~~C~~~f~~~~~L~   82 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLSHSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPYICQSCGKGFSRPDHLN   82 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHHSCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSBCCSSSCCCBSSHHHHH
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHhcCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCceECCCccchhCCHHHHH
Confidence            56788999999999999999999999999999999999999999999999999999987  8999999999999999999


Q ss_pred             HHHh-hhCC
Q psy9067         181 SHRL-IHTP  188 (189)
Q Consensus       181 ~H~~-~h~~  188 (189)
                      .|++ +|.+
T Consensus        83 ~H~~~~H~~   91 (95)
T 2yt9_A           83 GHIKQVHSG   91 (95)
T ss_dssp             HHHHHTSCC
T ss_pred             HHHHHhcCC
Confidence            9986 6654

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.83  E-value=2.7e-21  Score=120.93  Aligned_cols=87  Identities=34%  Similarity=0.606  Sum_probs=83.2

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHH
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK  180 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  180 (189)
                      .+.++++|.| .|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|.++++|.|++|++.|.+...|.
T Consensus         4 ~h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (110)
T 2csh_A            4 GSSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIHTGIKPYECNICAKRFMWRDSFH   82 (110)
T ss_dssp             CCCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTTCCCCCEECSSSCCEESCHHHHH
T ss_pred             CCCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHHHcCCCCCeeCCCCcchhcCHHHHH
Confidence            4678899999 999999999999999999999999999999999999999999999999999999999999999999999


Q ss_pred             HHHhhhCC
Q psy9067         181 SHRLIHTP  188 (189)
Q Consensus       181 ~H~~~h~~  188 (189)
                      .|+++|++
T Consensus        83 ~H~~~~~~   90 (110)
T 2csh_A           83 RHVTSCTK   90 (110)
T ss_dssp             HHHHHHHH
T ss_pred             HHHHHccc
Confidence            99998863

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.83  E-value=4.9e-21  Score=105.81  Aligned_cols=57  Identities=32%  Similarity=0.638  Sum_probs=53.4

Q ss_pred             CCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         132 GERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       132 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .++||.|.+|++.|...+.|..|+++|++++||.|++||++|.+.++|..|+++|+|
T Consensus         1 SEKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htg   57 (60)
T 4gzn_C            1 SERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQN   57 (60)
T ss_dssp             CCCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSC
T ss_pred             CCCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCC
Confidence            378999999999999999999999999999999999999999999999999999986

>2ee8_A Protein ODD-skipped-related 2; zinc binding, ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: k.12.1.1

Probab=99.82  E-value=6.1e-20  Score=113.95  Aligned_cols=92  Identities=30%  Similarity=0.558  Sum_probs=85.5

Q ss_pred             CCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccC
Q psy9067          59 TGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQC  138 (189)
Q Consensus        59 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C  138 (189)
                      ..+++|.|..|++.|.....|..|++.                +.++++|.|+.|++.|.....|..|++.|.++++|.|
T Consensus        13 ~~~~~~~C~~C~~~f~~~~~l~~H~~~----------------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C   76 (106)
T 2ee8_A           13 KTKKEFICKFCGRHFTKSYNLLIHERT----------------HTDERPYTCDICHKAFRRQDHLRDHRYIHSKEKPFKC   76 (106)
T ss_dssp             CCCCCCBCSSSCCBCSSHHHHHHHHHH----------------HCCSCCCBCSSSCCBCSCHHHHHHHGGGSCCCCTTSC
T ss_pred             CCCcCeECCCCCCccCCHHHHHHHHHH----------------cCCCCCcCCCCccchhCCHHHHHHHHHHhCCCCCeEC
Confidence            456789999999999999999999985                5667889999999999999999999999999999999


Q ss_pred             ccCCccCCChHHHHHHHHHhhCCCcccC
Q psy9067         139 AHCTYASPDTFKLKRHLRIHTGEKPYAC  166 (189)
Q Consensus       139 ~~C~~~f~~~~~l~~H~~~h~~~~~~~C  166 (189)
                      ++|++.|.....|..|+++|.++++|..
T Consensus        77 ~~C~~~f~~~~~L~~H~~~H~~~~~~~~  104 (106)
T 2ee8_A           77 QECGKGFCQSRTLAVHKTLHMQTSSPTA  104 (106)
T ss_dssp             SSSCCCCSSHHHHHHHHHHTTSCCCCCC
T ss_pred             CCcCCcccCHHHHHHHHHHhCCCCCCcC
Confidence            9999999999999999999999999865

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.82  E-value=6.1e-22  Score=124.85  Aligned_cols=88  Identities=18%  Similarity=0.223  Sum_probs=81.4

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhh--cCCCCCcc-CccCCccC--CChHHHHHHHHHhhCCCcccCccchhccCC
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRS--HTGERPYQ-CAHCTYAS--PDTFKLKRHLRIHTGEKPYACDICHARFTQ  175 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~--~~~~~~~~-C~~C~~~f--~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~  175 (189)
                      .+.++++|.|+.|++.|.....|..|++.  +.+.+++. |++|++.|  .....|..|+++|+++++|.|++|++.|.+
T Consensus        13 ~H~~~~~~~C~~C~k~f~~~~~L~~H~~~~~h~~~~~~~~C~~C~~~f~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~   92 (115)
T 2dmi_A           13 IFTGASKFRCKDCSAAYDTLVELTVHMNETGHYRDDNHETDNNNPKRWSKPRKRSLLEMEGKEDAQKVLKCMYCGHSFES   92 (115)
T ss_dssp             CCCCCCSEEBSSSSCEESSHHHHHHHHHHTCCCBCSCCCCCCCCCSCCSSCCCCCCCCCCCSCCCCSSCBCSSSCCBCSS
T ss_pred             eeCCCCCEECCccCchhcCHHHHHHHHHHhCccccCCCccCCCCCcccccccHHHHHHHhhccCCCcceECCCCCCccCC
Confidence            47788999999999999999999999998  76677655 99999999  899999999999999999999999999999


Q ss_pred             chHHHHHHhhhCC
Q psy9067         176 SNSLKSHRLIHTP  188 (189)
Q Consensus       176 ~~~l~~H~~~h~~  188 (189)
                      .+.|..|+++|++
T Consensus        93 ~~~L~~H~~~hh~  105 (115)
T 2dmi_A           93 LQDLSVHMIKTKH  105 (115)
T ss_dssp             HHHHHHHHHHTTT
T ss_pred             HHHHHHHHHHhCC
Confidence            9999999999875

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.82  E-value=3.7e-20  Score=113.71  Aligned_cols=87  Identities=34%  Similarity=0.762  Sum_probs=82.1

Q ss_pred             cCCCCCccCCC--CCccccchHHHHhchhhcCCCCCccCc--cCCccCCChHHHHHHHHHhhCCCcccCccchhccCCch
Q psy9067         102 HTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCA--HCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSN  177 (189)
Q Consensus       102 ~~~~~~~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~  177 (189)
                      ....+.|.|++  |++.|.....|..|++.|.++++|.|+  .|++.|.....|..|+++|+++++|.|++|++.|.+.+
T Consensus        10 ~~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~   89 (100)
T 2ebt_A           10 LEKRRIHYCDYPGCTKVYTKSSHLKAHLRTHTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKPFQCGVCNRSFSRSD   89 (100)
T ss_dssp             CCSCCCEECCSSSCCCEESCHHHHHHHHHHHSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCSCBCSSSCCBCSSHH
T ss_pred             cccCcceEcCCCCCCCcccCHHHHHHHHHHhCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCCeECCCCcCccCCHH
Confidence            45567899997  999999999999999999999999996  69999999999999999999999999999999999999


Q ss_pred             HHHHHHhhhCC
Q psy9067         178 SLKSHRLIHTP  188 (189)
Q Consensus       178 ~l~~H~~~h~~  188 (189)
                      .|..|+++|++
T Consensus        90 ~l~~H~~~H~~  100 (100)
T 2ebt_A           90 HLALHMKRHQN  100 (100)
T ss_dssp             HHHHHHHHHCC
T ss_pred             HHHHHHHHhCC
Confidence            99999999975

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.82  E-value=3e-20  Score=111.66  Aligned_cols=83  Identities=35%  Similarity=0.775  Sum_probs=79.3

Q ss_pred             CCCccCCC--CCccccchHHHHhchhhcCCCCCccCc--cCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHH
Q psy9067         105 EKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCA--HCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK  180 (189)
Q Consensus       105 ~~~~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  180 (189)
                      ..+|.|+.  |++.|.....|..|++.|.++++|.|+  +|++.|.....|..|+++|+++++|.|++|++.|.+.+.|.
T Consensus         3 ~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~   82 (89)
T 2wbs_A            3 TATHTCDYAGCGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHYRKHTGHRPFQCQKCDRAFSRSDHLA   82 (89)
T ss_dssp             CCCEECCSTTTCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHH
T ss_pred             CCCeeCCCCCCCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCcccCCHHHHH
Confidence            46799999  999999999999999999999999997  69999999999999999999999999999999999999999


Q ss_pred             HHHhhhC
Q psy9067         181 SHRLIHT  187 (189)
Q Consensus       181 ~H~~~h~  187 (189)
                      .|+++|.
T Consensus        83 ~H~~~H~   89 (89)
T 2wbs_A           83 LHMKRHF   89 (89)
T ss_dssp             HHGGGGC
T ss_pred             HHHHhhC
Confidence            9999983

>2dmd_A Zinc finger protein 64, isoforms 1 and 2; ZNF338, nuclear protein, DNA- binding, transcription, C2H2-type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.81  E-value=9.9e-20  Score=110.95  Aligned_cols=87  Identities=44%  Similarity=0.883  Sum_probs=45.1

Q ss_pred             CCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCc
Q psy9067          60 GVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCA  139 (189)
Q Consensus        60 ~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~  139 (189)
                      ++++|.|..|++.|.....|..|++.                +.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         5 ~~~~~~C~~C~~~f~~~~~l~~H~~~----------------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~   68 (96)
T 2dmd_A            5 SSGPHKCEVCGKCFSRKDKLKTHMRC----------------HTGVKPYKCKTCDYAAADSSSLNKHLRIHSDERPFKCQ   68 (96)
T ss_dssp             CCCCCCBTTTTBCCCCHHHHHHHGGG----------------CCCCCSEECSSSCCEESSHHHHHHHHHHSCCCCCEECS
T ss_pred             CCcCeECCCCCCccCCHHHHHHHHHh----------------cCCCCCEeCCCCCCccCCHHHHHHHHHHhCCCCCccCC
Confidence            34445555555555555555555442                33334455555555555555555555555555555555


Q ss_pred             cCCccCCChHHHHHHHHHhhCCC
Q psy9067         140 HCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       140 ~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      +|++.|.....|..|+++|++++
T Consensus        69 ~C~~~f~~~~~l~~H~~~h~~~~   91 (96)
T 2dmd_A           69 ICPYASRNSSQLTVHLRSHTGDS   91 (96)
T ss_dssp             SSSCEESSHHHHHHHHTTCCSCC
T ss_pred             CCCCccCCHHHHHHHHHHhcCCC
Confidence            55555555555555555555544

>2dmi_A Teashirt homolog 3; zinc finger protein 537, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.81  E-value=6.1e-21  Score=120.23  Aligned_cols=103  Identities=15%  Similarity=0.138  Sum_probs=69.4

Q ss_pred             hHHHHHhhcCCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCC-CccCCCCCccc--cchHHHHhc
Q psy9067          50 SLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEK-PHKCSICDYAS--VELSKMRNH  126 (189)
Q Consensus        50 ~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~-~~~C~~C~~~~--~~~~~l~~H  126 (189)
                      .|..|++.|.++++|.|..|++.|.....|..|++. +.             +...+ .+.|+.|++.|  .....|..|
T Consensus         6 ~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~-~~-------------h~~~~~~~~C~~C~~~f~f~~~~~l~~H   71 (115)
T 2dmi_A            6 SGKLYGSIFTGASKFRCKDCSAAYDTLVELTVHMNE-TG-------------HYRDDNHETDNNNPKRWSKPRKRSLLEM   71 (115)
T ss_dssp             CCCCCCCCCCCCCSEEBSSSSCEESSHHHHHHHHHH-TC-------------CCBCSCCCCCCCCCSCCSSCCCCCCCCC
T ss_pred             hhhhheeeeCCCCCEECCccCchhcCHHHHHHHHHH-hC-------------ccccCCCccCCCCCcccccccHHHHHHH
Confidence            345556666666666666666666666666666653 11             12222 34477777777  777778888


Q ss_pred             hhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccC
Q psy9067         127 MRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC  166 (189)
Q Consensus       127 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  166 (189)
                      ++.|.+++||.|++|++.|.....|..|+++|+.......
T Consensus        72 ~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~hh~~~~~~~  111 (115)
T 2dmi_A           72 EGKEDAQKVLKCMYCGHSFESLQDLSVHMIKTKHYQKVSG  111 (115)
T ss_dssp             CCSCCCCSSCBCSSSCCBCSSHHHHHHHHHHTTTTTCSCC
T ss_pred             hhccCCCcceECCCCCCccCCHHHHHHHHHHhCCcccCCC
Confidence            8888888888888888888888888888887766554443

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.80  E-value=7.2e-20  Score=113.84  Aligned_cols=85  Identities=19%  Similarity=0.309  Sum_probs=79.1

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHH
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK  180 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  180 (189)
                      .+.++++|.|+.|++.|.....|..|++.|  .++|.|++|++.|.....|..|+. |.++++|.|.+|++.|.+.+.|.
T Consensus        10 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H--~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~~~~C~~C~~~f~~~~~L~   86 (107)
T 1wjp_A           10 PVENKEVYQCRLCNAKLSSLLEQGSHERLC--RNAAVCPYCSLRFFSPELKQEHES-KCEYKKLTCLECMRTFKSSFSIW   86 (107)
T ss_dssp             CCCCCCCCBCTTTCCBCSSHHHHHHHHHHH--HHSBCCTTTCCCBSSHHHHHHHHH-HCSTGGGEEGGGTEECSSHHHHH
T ss_pred             ccCCCcCeECCCCCCccCCHHHHHHHHHHC--CCCccCCCCCCccCCHHHHHHHHH-cCCCCCccCccccchhCCHHHHH
Confidence            467788999999999999999999999998  479999999999999999999995 99999999999999999999999


Q ss_pred             HHHh-hhCC
Q psy9067         181 SHRL-IHTP  188 (189)
Q Consensus       181 ~H~~-~h~~  188 (189)
                      .|++ +|.+
T Consensus        87 ~H~~~~H~~   95 (107)
T 1wjp_A           87 RHQVEVHNQ   95 (107)
T ss_dssp             HHHHHTSCC
T ss_pred             HHHHHHcCC
Confidence            9997 6654

>1wjp_A Zinc finger protein 295; ZF-C2H2 domain, zinc binding, nucleic acid binding, KIAA1227 protein, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.79  E-value=6.9e-20  Score=113.94  Aligned_cols=94  Identities=15%  Similarity=0.306  Sum_probs=72.7

Q ss_pred             HhhcCCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCC
Q psy9067          55 INTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGER  134 (189)
Q Consensus        55 ~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~  134 (189)
                      ++.+.++++|.|..|++.|.....|..|++.|                  .++|.|+.|++.|.....|..|+. |.+++
T Consensus         8 ~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~H------------------~~~~~C~~C~~~f~~~~~l~~H~~-H~~~~   68 (107)
T 1wjp_A            8 ASPVENKEVYQCRLCNAKLSSLLEQGSHERLC------------------RNAAVCPYCSLRFFSPELKQEHES-KCEYK   68 (107)
T ss_dssp             CCCCCCCCCCBCTTTCCBCSSHHHHHHHHHHH------------------HHSBCCTTTCCCBSSHHHHHHHHH-HCSTG
T ss_pred             CcccCCCcCeECCCCCCccCCHHHHHHHHHHC------------------CCCccCCCCCCccCCHHHHHHHHH-cCCCC
Confidence            34566677777777877787777777777642                  135788888888888888888875 88888


Q ss_pred             CccCccCCccCCChHHHHHHHH-HhhCCCcccCc
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLR-IHTGEKPYACD  167 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~  167 (189)
                      ||.|++|++.|.....|..|++ +|.++++|.|+
T Consensus        69 ~~~C~~C~~~f~~~~~L~~H~~~~H~~~~~~~~~  102 (107)
T 1wjp_A           69 KLTCLECMRTFKSSFSIWRHQVEVHNQNNMAPTS  102 (107)
T ss_dssp             GGEEGGGTEECSSHHHHHHHHHHTSCCCCCCCCC
T ss_pred             CccCccccchhCCHHHHHHHHHHHcCCCCCCCCC
Confidence            8888888888888888888886 78888888764

>1a1h_A QGSR zinc finger peptide; complex (zinc finger/DNA), DNA-binding protein, transcription/DNA complex; HET: DNA; 1.60A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1jk2_A 1jk1_A 1a1g_A* 1a1f_A* 1a1i_A* 1a1j_A* 1a1k_A* 1aay_A* 1a1l_A* 1p47_A 1zaa_C* 1g2f_C 1g2d_C

Probab=99.78  E-value=1.3e-19  Score=109.11  Aligned_cols=87  Identities=38%  Similarity=0.757  Sum_probs=78.1

Q ss_pred             CCCCcccc--cCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCcc
Q psy9067          60 GVKPHKCK--YCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQ  137 (189)
Q Consensus        60 ~~~~~~C~--~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~  137 (189)
                      ++++|.|+  .|++.|.....|..|++.                +.++++|.|+.|++.|.....|..|++.|.++++|.
T Consensus         1 ~~k~~~C~~~~C~~~f~~~~~l~~H~~~----------------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~   64 (90)
T 1a1h_A            1 MERPYACPVESCDRRFSQSGSLTRHIRI----------------HTGQKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFA   64 (90)
T ss_dssp             --CCEECCSSSCCCEESSHHHHHHHHHH----------------HHCCCCEECTTTCCEESCHHHHHHHHHHHHCCCCEE
T ss_pred             CCCceECCCCCCCCccCCHHHHHHHHHH----------------hCCCCCccCCCCCcccCCHHHHHHHHHHcCCCCCcc
Confidence            35789998  599999999999999985                556778999999999999999999999999999999


Q ss_pred             CccCCccCCChHHHHHHHHHhhCCC
Q psy9067         138 CAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       138 C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      |++|++.|.....|..|+++|++++
T Consensus        65 C~~C~~~f~~~~~l~~H~~~H~~~k   89 (90)
T 1a1h_A           65 CDICGRKFARSDERKRHTKIHLRQK   89 (90)
T ss_dssp             CTTTCCEESSHHHHHHHHGGGGC--
T ss_pred             CCCCCchhCCHHHHHHHHHHhcccC
Confidence            9999999999999999999999875

>2kmk_A Zinc finger protein GFI-1; tandem repeat zinc finger domain, protein-DNA complex, DNA-B metal-binding, nucleus; HET: DNA; NMR {Rattus norvegicus}

Probab=99.78  E-value=2.3e-19  Score=106.12  Aligned_cols=82  Identities=34%  Similarity=0.622  Sum_probs=76.3

Q ss_pred             CcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCC
Q psy9067          63 PHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT  142 (189)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~  142 (189)
                      ||.|..|++.|.....|..|++.                +.++++|.|+.|++.|.....|..|++.|.++++|.|++|+
T Consensus         1 ~~~C~~C~~~f~~~~~l~~H~~~----------------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~   64 (82)
T 2kmk_A            1 SFDCKICGKSFKRSSTLSTHLLI----------------HSDTRPYPCQYCGKRFHQKSDMKKHTFIHTGEKPHKCQVCG   64 (82)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH----------------HHTCCCEECSSSCCEESSHHHHHHHHHHHHTCCCEECTTTS
T ss_pred             CccCCCCcccccCchhHHHHHHH----------------cCCCCCeeCCcCChhhCCHHHHHHHHHHhcCCCCCcCCCcc
Confidence            58899999999999999999985                55678899999999999999999999999999999999999


Q ss_pred             ccCCChHHHHHHHHHhhC
Q psy9067         143 YASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       143 ~~f~~~~~l~~H~~~h~~  160 (189)
                      +.|.....|..|+++|++
T Consensus        65 ~~f~~~~~l~~H~~~H~g   82 (82)
T 2kmk_A           65 KAFSQSSNLITHSRKHTG   82 (82)
T ss_dssp             CEESSHHHHHHHHHHHC-
T ss_pred             hhhCChHHHHHHHHhhCC
Confidence            999999999999999864

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.77  E-value=1.5e-20  Score=112.83  Aligned_cols=83  Identities=25%  Similarity=0.425  Sum_probs=78.1

Q ss_pred             CCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHh
Q psy9067         105 EKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       105 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~  184 (189)
                      +++|.|+.|++.|.....|..|++.|.+++||.|++|++.|.....|..|+++|++ .+|.|+.|++.|.+.++|..|++
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~C~~~f~~~~~L~~H~~   79 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRTHTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDKVEELLSKNYHLENEVA   79 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHHHHHHHHHHHHHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHHcCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHHHHHHHHHHhhhHHHHH
Confidence            36899999999999999999999999999999999999999999999999999885 88999999999999999999998


Q ss_pred             hhCC
Q psy9067         185 IHTP  188 (189)
Q Consensus       185 ~h~~  188 (189)
                      .+|+
T Consensus        80 ~~h~   83 (88)
T 1llm_C           80 RLKK   83 (88)
T ss_dssp             HHHH
T ss_pred             HHHH
Confidence            7653

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.76  E-value=5.8e-19  Score=105.04  Aligned_cols=78  Identities=28%  Similarity=0.466  Sum_probs=75.0

Q ss_pred             CccC--CCCCccccchHHHHhchhhcCCCCCccCcc--CCccCCChHHHHHHHHHhhCCCcccCcc---chhccCCchHH
Q psy9067         107 PHKC--SICDYASVELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEKPYACDI---CHARFTQSNSL  179 (189)
Q Consensus       107 ~~~C--~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~---C~~~f~~~~~l  179 (189)
                      +|.|  +.||+.|.....|..|++.|.++++|.|++  |++.|.....|..|+++|++   |.|+.   |++.|.+.+.|
T Consensus         1 p~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            1 MYVCHFENCGKAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             CEECCSTTCCCEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             CccCCCCCCCcccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            5789  889999999999999999999999999988  99999999999999999998   99999   99999999999


Q ss_pred             HHHHhhhC
Q psy9067         180 KSHRLIHT  187 (189)
Q Consensus       180 ~~H~~~h~  187 (189)
                      ..|+++||
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99999986

>2yt9_A Zinc finger-containing protein 1; C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 g.37.1.1

Probab=99.76  E-value=2.7e-18  Score=104.34  Aligned_cols=88  Identities=31%  Similarity=0.628  Sum_probs=79.6

Q ss_pred             CCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCC--CCc
Q psy9067          59 TGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGE--RPY  136 (189)
Q Consensus        59 ~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~--~~~  136 (189)
                      .++++|.|..|++.|.....|..|++.                +.++++|.|+.|++.|.....|..|++.|.++  ++|
T Consensus         3 ~~~~~~~C~~C~~~f~~~~~l~~H~~~----------------h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~~   66 (95)
T 2yt9_A            3 SGSSGVACEICGKIFRDVYHLNRHKLS----------------HSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKPY   66 (95)
T ss_dssp             CCCSCEECSSSCCEESSSHHHHHHHHH----------------SCSSCSEECSSSCCEESCHHHHHHHHHHHCCCCCSSB
T ss_pred             CCCCCeECCCCCCccCChHHHHHHHHh----------------cCCCCCCcCCCCCCccCCHHHHHHHHHHhcCCCCCce
Confidence            467889999999999999999999984                56678899999999999999999999999887  999


Q ss_pred             cCccCCccCCChHHHHHHHH-HhhCCC
Q psy9067         137 QCAHCTYASPDTFKLKRHLR-IHTGEK  162 (189)
Q Consensus       137 ~C~~C~~~f~~~~~l~~H~~-~h~~~~  162 (189)
                      .|++|++.|.....|..|++ +|.++.
T Consensus        67 ~C~~C~~~f~~~~~L~~H~~~~H~~~~   93 (95)
T 2yt9_A           67 ICQSCGKGFSRPDHLNGHIKQVHSGPS   93 (95)
T ss_dssp             CCSSSCCCBSSHHHHHHHHHHTSCCCS
T ss_pred             ECCCccchhCCHHHHHHHHHHhcCCCC
Confidence            99999999999999999986 676643

>4gzn_C ZFP-57, zinc finger protein 57; transcription-DNA complex; HET: DNA 5CM; 0.99A {Mus musculus}

Probab=99.74  E-value=1.1e-18  Score=96.38  Aligned_cols=58  Identities=31%  Similarity=0.664  Sum_probs=55.6

Q ss_pred             CCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCC
Q psy9067         105 EKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       105 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      ++||.|++||+.|.....|..|+++|.+++||.|++|++.|...+.|..|+++|+++.
T Consensus         2 EKpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~C~k~F~~~~~L~~H~~~Htgep   59 (60)
T 4gzn_C            2 ERPFFCNFCGKTYRDASGLSRHRRAHLGYRPRSCPECGKCFRDQSEVNRHLKVHQNKP   59 (60)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHHHHHTCCCEECTTTCCEESSHHHHHHHGGGGSCC-
T ss_pred             CCCccCCCCCCEeCCHHHHHHHHHHhCCCcCeECCCCCCCcCCHHHHHHHhCccCCCC
Confidence            6899999999999999999999999999999999999999999999999999999874

>2csh_A Zinc finger protein 297B; ZF-C2H2 domain, zinc finger and BTB domain containing protein 22B, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.74  E-value=4.5e-18  Score=106.17  Aligned_cols=54  Identities=26%  Similarity=0.644  Sum_probs=29.0

Q ss_pred             CCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhhh
Q psy9067          30 HSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVR   84 (189)
Q Consensus        30 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~   84 (189)
                      |.++++|.| .|++.|.....|..|++.|.++++|.|..|++.|.....|..|++
T Consensus         5 h~~~k~~~C-~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~   58 (110)
T 2csh_A            5 SSGDKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK   58 (110)
T ss_dssp             CCCCCCEEC-TTSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHT
T ss_pred             CCCCCCEec-cCCCccCCHHHHHHHHHHcCCCcCccCCCCCcccCCHHHHHHHHH
Confidence            445555555 555555555555555555555555555555555555555555544

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.73  E-value=6.8e-18  Score=99.02  Aligned_cols=72  Identities=17%  Similarity=0.450  Sum_probs=67.7

Q ss_pred             CCCCCccCCC--CCccccchHHHHhchh-hcCCCCCccCcc--CCccCCChHHHHHHHHHhhCCCcccCccchhccC
Q psy9067         103 THEKPHKCSI--CDYASVELSKMRNHMR-SHTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEKPYACDICHARFT  174 (189)
Q Consensus       103 ~~~~~~~C~~--C~~~~~~~~~l~~H~~-~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  174 (189)
                      .++++|.|+.  |++.|.....|..|++ .|.++++|.|++  |++.|.....|..|+++|+++++|.|++||++|.
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~k~F~   79 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKYQHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEFSGPSSG   79 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHHGGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCSSSCCCC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHHHhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCCCeeCCCCCCCCC
Confidence            4567899987  9999999999999999 799999999999  9999999999999999999999999999999984

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.71  E-value=6.1e-19  Score=113.25  Aligned_cols=80  Identities=20%  Similarity=0.344  Sum_probs=67.3

Q ss_pred             CccCCCCCcccc------chHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHH
Q psy9067         107 PHKCSICDYASV------ELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK  180 (189)
Q Consensus       107 ~~~C~~C~~~~~------~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  180 (189)
                      .+.|+.|++.|.      ....|..|+ .|.+++||.|++|++.|.....|..|+++|  ++||.|++||+.|.+.+.|.
T Consensus        41 ~~~c~~~~~~~~~~~~~~~~~~l~~h~-~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~  117 (129)
T 2wbt_A           41 RLIRAIVKTLIHNPQLLDESSYLYRLL-ASKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSAL  117 (129)
T ss_dssp             HHHHHHHHHHHHCGGGTTTHHHHHHHH-HHHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHH
T ss_pred             cccchhhhcccCCCcccCCHHHHHHHH-HhCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHH
Confidence            345555555444      556666666 577899999999999999999999999998  89999999999999999999


Q ss_pred             HHHhhhCCC
Q psy9067         181 SHRLIHTPL  189 (189)
Q Consensus       181 ~H~~~h~~~  189 (189)
                      .|+++|||.
T Consensus       118 ~H~~~h~~~  126 (129)
T 2wbt_A          118 DHVCKKHNI  126 (129)
T ss_dssp             HHHHHTTCC
T ss_pred             HHHHHHCCc
Confidence            999999984

>2ebt_A Krueppel-like factor 5; C2H2-type zinc-finger, metal BIND, transcription factor, kruppel-like factor, GC-box promoter elements, structural genomics; NMR {Homo sapiens}

Probab=99.70  E-value=5.6e-17  Score=99.33  Aligned_cols=85  Identities=35%  Similarity=0.710  Sum_probs=77.7

Q ss_pred             CCCCccccc--CcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCC--CCCccccchHHHHhchhhcCCCCC
Q psy9067          60 GVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGERP  135 (189)
Q Consensus        60 ~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~~~~~~~  135 (189)
                      ..++|.|..  |++.|.....|..|++.                +.++++|.|+  .|++.|.....|..|++.|.++++
T Consensus        12 ~~~~~~C~~~~C~~~f~~~~~l~~H~~~----------------h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~~~~   75 (100)
T 2ebt_A           12 KRRIHYCDYPGCTKVYTKSSHLKAHLRT----------------HTGEKPYKCTWEGCDWRFARSDELTRHYRKHTGAKP   75 (100)
T ss_dssp             SCCCEECCSSSCCCEESCHHHHHHHHHH----------------HSCCCCEECCSSSCCCEESSHHHHHHHHHHHTSCCS
T ss_pred             cCcceEcCCCCCCCcccCHHHHHHHHHH----------------hCCCCCeeCCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            456799996  99999999999999985                5667889996  699999999999999999999999


Q ss_pred             ccCccCCccCCChHHHHHHHHHhhC
Q psy9067         136 YQCAHCTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       136 ~~C~~C~~~f~~~~~l~~H~~~h~~  160 (189)
                      |.|++|++.|.....|..|+++|++
T Consensus        76 ~~C~~C~~~f~~~~~l~~H~~~H~~  100 (100)
T 2ebt_A           76 FQCGVCNRSFSRSDHLALHMKRHQN  100 (100)
T ss_dssp             CBCSSSCCBCSSHHHHHHHHHHHCC
T ss_pred             eECCCCcCccCCHHHHHHHHHHhCC
Confidence            9999999999999999999999864

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.69  E-value=3.2e-17  Score=89.99  Aligned_cols=57  Identities=37%  Similarity=0.665  Sum_probs=50.6

Q ss_pred             CCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         132 GERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       132 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +++||.|++|++.|.....|..|+++|+++++|.|++|++.|.+.+.|..|+++||+
T Consensus         1 g~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            1 GSSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ----CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            467999999999999999999999999999999999999999999999999999985

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=1.8e-17  Score=93.82  Aligned_cols=62  Identities=26%  Similarity=0.557  Sum_probs=56.7

Q ss_pred             hhcCCCCCccCccCCccCCChHHHHHHHHH-h-hCCCcccCccchhccCCchHHHHHHhhhCCC
Q psy9067         128 RSHTGERPYQCAHCTYASPDTFKLKRHLRI-H-TGEKPYACDICHARFTQSNSLKSHRLIHTPL  189 (189)
Q Consensus       128 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-h-~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  189 (189)
                      ++|.+++||.|++|++.|.....|..|+++ | .++++|.|+.|++.|.+.+.|..|+++||+|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~i   66 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHKI   66 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC-
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcCC
Confidence            467788999999999999999999999998 6 5899999999999999999999999999986

>2wbs_A Krueppel-like factor 4; transcription-DNA complex, DNA-binding, transcription, metal-binding, DNA, protein, nucleus, activator; 1.70A {Mus musculus} PDB: 2wbu_A

Probab=99.68  E-value=8.9e-17  Score=96.32  Aligned_cols=43  Identities=40%  Similarity=0.782  Sum_probs=17.7

Q ss_pred             CCccccchhhHHHHHhhcCCCCCcccc--cCcccCCChhHHHhhh
Q psy9067          41 CERGFKTIASLQNHINTHTGVKPHKCK--YCESRFTTSGELVRHV   83 (189)
Q Consensus        41 C~~~f~~~~~l~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~h~   83 (189)
                      |++.|.....|..|+..|.++++|.|+  .|++.|.....|..|+
T Consensus        13 C~~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~   57 (89)
T 2wbs_A           13 CGKTYTKSSHLKAHLRTHTGEKPYHCDWDGCGWKFARSDELTRHY   57 (89)
T ss_dssp             TCCEESSHHHHHHHHTTSCSSCCEECCSTTTCCEESSHHHHHHHH
T ss_pred             CCCcCCCHHHHHHHHHhcCCCCCcCCCCCCCCCccCCHHHHHHHH
Confidence            444444444444444444444444443  2444444444444443

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.68  E-value=3.4e-17  Score=94.31  Aligned_cols=62  Identities=44%  Similarity=0.798  Sum_probs=52.6

Q ss_pred             hhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         127 MRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       127 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .+.|.+++||.|++|++.|.....|..|+++|.++++|.|++|++.|.+...|..|+++|++
T Consensus         6 ~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   67 (72)
T 1x6e_A            6 SGIHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTS   67 (72)
T ss_dssp             CCTTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHS
T ss_pred             CcccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCC
Confidence            45677788888888888888888888888888888888888888888888888888888864

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.67  E-value=1.1e-17  Score=102.31  Aligned_cols=70  Identities=16%  Similarity=0.357  Sum_probs=59.3

Q ss_pred             chHHHHhchhhcCCCCCccCccCCccCC-ChHHHHHHHHHhhC-CCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         119 ELSKMRNHMRSHTGERPYQCAHCTYASP-DTFKLKRHLRIHTG-EKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       119 ~~~~l~~H~~~~~~~~~~~C~~C~~~f~-~~~~l~~H~~~h~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ....+..|++.|.++++|.|++|++.|. ....|..|+++|++ +++|.|.+|++.|.+...|..|+++|++
T Consensus         8 ~~~~~~~h~~~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~   79 (98)
T 2gqj_A            8 PGGPEEQWQRAIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHS   79 (98)
T ss_dssp             CCCSCSHHHHTTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSC
T ss_pred             CCCcHHHHHHHhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcC
Confidence            3444567788888888999999999998 88899999988888 8889999999999999999999888875

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.67  E-value=2.5e-17  Score=96.17  Aligned_cols=66  Identities=24%  Similarity=0.484  Sum_probs=60.1

Q ss_pred             HHhchhhcCCCCCccCccCCccCCChHHHHHHHH-HhhCC-CcccCccchhccCCchHHHHHHhhhCC
Q psy9067         123 MRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLR-IHTGE-KPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       123 l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~-~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +..|+++|.+++||.|++|++.|.....|..|++ .|.++ ++|.|++|++.|.+.+.|..|++++|+
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~   70 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHS   70 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCC
Confidence            4578999999999999999999999999999997 67664 899999999999999999999999876

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.66  E-value=5.5e-17  Score=98.55  Aligned_cols=72  Identities=15%  Similarity=0.257  Sum_probs=66.1

Q ss_pred             cccchHHHHhchhhcCCCCCccCccCCccC-CChHHHHHHHHHhhCCCcccCccchhccCCchHHHHH-HhhhCC
Q psy9067         116 ASVELSKMRNHMRSHTGERPYQCAHCTYAS-PDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSH-RLIHTP  188 (189)
Q Consensus       116 ~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f-~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~  188 (189)
                      .|.....+..|.+.+.++++|.|++|++.| .....|..|+++| ++++|.|.+||+.|...+.|..| +++|++
T Consensus        15 ~~~~~~~~~~~~~~~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~~L~~H~~~~H~~   88 (96)
T 2ctd_A           15 VYAAGSLEEQWYLEIVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLAGMKYHVMANHNS   88 (96)
T ss_dssp             SSCTTCHHHHHHHHHHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             CCCCchHHHHHHHHhcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHHHHHHHhHHhcCC
Confidence            456677788888888899999999999999 9999999999999 99999999999999999999999 888865

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.65  E-value=1.4e-16  Score=92.90  Aligned_cols=65  Identities=34%  Similarity=0.621  Sum_probs=54.8

Q ss_pred             cCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccC
Q psy9067         102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC  166 (189)
Q Consensus       102 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  166 (189)
                      ..++++|.|+.|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|++++||.|
T Consensus        13 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~p~~C   77 (77)
T 2cot_A           13 QRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTGSGPSSG   77 (77)
T ss_dssp             CCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCCCCCCCC
T ss_pred             CCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCC
Confidence            45667888888888888888888888888888888888888888888888888888888888877

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.3e-16  Score=91.27  Aligned_cols=60  Identities=28%  Similarity=0.723  Sum_probs=30.4

Q ss_pred             CCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCC
Q psy9067         103 THEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       103 ~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      .++++|.|+.|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|++++
T Consensus         5 ~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~   64 (70)
T 1x5w_A            5 SSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHGDM   64 (70)
T ss_dssp             CCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHSSS
T ss_pred             CCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhCCC
Confidence            344445555555555555555555555555555555555555555555555555554444

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.64  E-value=1.5e-16  Score=94.72  Aligned_cols=73  Identities=21%  Similarity=0.324  Sum_probs=65.9

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhhcCCC----CCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhcc
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGE----RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARF  173 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~----~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f  173 (189)
                      .+.++++|.|+.|++.|.....|..|++.+.+.    ++|.|++|++.|.....|..|+++|++++++.|..|+.+|
T Consensus         9 ~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A            9 THTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADNCAGPDGVEGENSGPSS   85 (86)
T ss_dssp             TCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHHCCCCCSCCCCCCCCCC
T ss_pred             eecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHHccCCCCcccCCCCCCC
Confidence            477788999999999999999999998877665    7899999999999999999999999999999999998765

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.64  E-value=3.2e-16  Score=90.69  Aligned_cols=56  Identities=41%  Similarity=0.872  Sum_probs=28.1

Q ss_pred             CCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhC
Q psy9067         132 GERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       132 ~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      ++++|.|++|++.|.....|..|+++|+++++|.|.+|++.|...+.|..|+++|+
T Consensus        14 ~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~   69 (74)
T 2lce_A           14 SDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHS   69 (74)
T ss_dssp             CCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHC
T ss_pred             CCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcC
Confidence            34445555555555555555555555555555555555555555555555555444

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.63  E-value=1.9e-16  Score=93.50  Aligned_cols=57  Identities=23%  Similarity=0.363  Sum_probs=44.6

Q ss_pred             hcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhh
Q psy9067         129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI  185 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  185 (189)
                      .+.+.++|.|++|++.|.....|..|+++|++++||.|.+|++.|.+.++|.+|++.
T Consensus        22 ~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~   78 (85)
T 2lv2_A           22 LSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINK   78 (85)
T ss_dssp             SCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHT
T ss_pred             CCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcc
Confidence            345567788888888888888888888888888888888888888888888888643

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.63  E-value=1.8e-16  Score=96.86  Aligned_cols=71  Identities=21%  Similarity=0.507  Sum_probs=65.0

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchh-hc---CCCCCccCccCCccCCChHHHHHH-HHHhhCCCcccCccchh
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMR-SH---TGERPYQCAHCTYASPDTFKLKRH-LRIHTGEKPYACDICHA  171 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~-~~---~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~~~~~C~~C~~  171 (189)
                      ...++++|.|+.||+.|.....|..|++ .|   .+++||.|.+|++.|.....|..| +++|++++||.|.++..
T Consensus        12 ~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r~Htgekpy~C~~~~~   87 (102)
T 2ghf_A           12 NKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLKYHPGEENFKLTMVKR   87 (102)
T ss_dssp             CCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHHTSTTCCCEEEEECCC
T ss_pred             cCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhcCCCCCeeCCcccC
Confidence            4678899999999999999999999997 48   568999999999999999999999 89999999999998653

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.62  E-value=5.5e-16  Score=84.98  Aligned_cols=54  Identities=30%  Similarity=0.640  Sum_probs=47.4

Q ss_pred             CccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ||.|++|++.|.....|..|+++|+++++|.|+.|++.|.+.++|..|+++|++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~   54 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAH   54 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSS
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcc
Confidence            578888888888888888898888888889999999999998889999888875

>1llm_C Chimera of ZIF23-GCN4; dimerization, DNA recognition, leucine zipper, X-RAY crystallography, structure-based design, zinc fingers; 1.50A {Mus musculus} SCOP: g.37.1.1 g.37.1.1 PDB: 1xf7_A

Probab=99.62  E-value=2.2e-17  Score=98.86  Aligned_cols=82  Identities=24%  Similarity=0.454  Sum_probs=75.1

Q ss_pred             CCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCcc
Q psy9067          61 VKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAH  140 (189)
Q Consensus        61 ~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~  140 (189)
                      ++||.|..|++.|.....|..|++.                +.++++|.|+.|++.|.....|..|++.+++ .++.|+.
T Consensus         1 ek~~~C~~C~k~f~~~~~L~~H~~~----------------H~~~~~~~C~~C~k~f~~~~~L~~H~~~h~~-~~~~c~~   63 (88)
T 1llm_C            1 MKPFQCRICMRNFSRSDHLTTHIRT----------------HTGEKPFACDICGRKFARSDERKRHRDIQHI-LPILEDK   63 (88)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHH----------------HHCCCCEECTTTCCEESSHHHHHHHHHHHTH-HHHHHHH
T ss_pred             CCCCcCCCCCCccCCHHHHHHHHHH----------------cCCCCCccCCCCCCccCCHHHHHHHHHHhCC-CcchHHH
Confidence            4789999999999999999999985                5667889999999999999999999999875 7899999


Q ss_pred             CCccCCChHHHHHHHHHhh
Q psy9067         141 CTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       141 C~~~f~~~~~l~~H~~~h~  159 (189)
                      |++.|.....|..|++.++
T Consensus        64 C~~~f~~~~~L~~H~~~~h   82 (88)
T 1llm_C           64 VEELLSKNYHLENEVARLK   82 (88)
T ss_dssp             HHHHHHHHHHHHHHHHHHH
T ss_pred             HHHHHHHHhhhHHHHHHHH
Confidence            9999999999999998654

>2lce_A B-cell lymphoma 6 protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.62  E-value=8.7e-16  Score=88.81  Aligned_cols=64  Identities=39%  Similarity=0.718  Sum_probs=61.0

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcc
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPY  164 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  164 (189)
                      ...++++|.|+.|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|++++||
T Consensus        11 ~~~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   74 (74)
T 2lce_A           11 MTHSDKPYKCDRCQASFRYKGNLASHKTVHTGEKPYRCNICGAQFNRPANLKTHTRIHSGEKPY   74 (74)
T ss_dssp             CCCCCCSBCCTTSSCCBSCHHHHHHHHHHHCCCCSEECTTTCCEESCHHHHHHHHHHHCCSCCC
T ss_pred             ccCCCCCeECCCCCceeCCHHHHHHHHHHcCCCCCEECCCCCchhCCHHHHHHHHHhcCCCCCC
Confidence            4667889999999999999999999999999999999999999999999999999999999886

>2dlk_A Novel protein; ZF-C2H2 domain, zinc finger protein 692, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.61  E-value=8.8e-16  Score=89.88  Aligned_cols=73  Identities=26%  Similarity=0.560  Sum_probs=65.4

Q ss_pred             CCCCCccccc--CcccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCC--CCccccchHHHHhchhhcCCCC
Q psy9067          59 TGVKPHKCKY--CESRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGER  134 (189)
Q Consensus        59 ~~~~~~~C~~--C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~~~~~~  134 (189)
                      .++++|.|..  |++.|.....|..|++.               .+.++++|.|++  |++.|.....|..|++.|.+++
T Consensus         3 ~~~~~~~C~~~~C~~~f~~~~~L~~H~~~---------------~H~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~   67 (79)
T 2dlk_A            3 SGSSGMPCDFPGCGRIFSNRQYLNHHKKY---------------QHIHQKSFSCPEPACGKSFNFKKHLKEHMKLHSDTR   67 (79)
T ss_dssp             SCCSSEECSSTTTCCEESSHHHHHHHHHH---------------GGGSCCCEECSCTTTCCEESSHHHHHHHHHHHHTSC
T ss_pred             CCCCCccCCCCCCcCccCCHHHHHHHHHH---------------HhCCCCCeECCCCCCcCccCCHHHHHHHHHHhCCCC
Confidence            4567888887  99999999999999873               256778899999  9999999999999999999999


Q ss_pred             CccCccCCccCC
Q psy9067         135 PYQCAHCTYASP  146 (189)
Q Consensus       135 ~~~C~~C~~~f~  146 (189)
                      ||.|++|++.|.
T Consensus        68 ~~~C~~C~k~F~   79 (79)
T 2dlk_A           68 DYICEFSGPSSG   79 (79)
T ss_dssp             CCSCCSSSCCCC
T ss_pred             CeeCCCCCCCCC
Confidence            999999999984

>2cot_A Zinc finger protein 435; ADK_LID domain, zinc finger and SCAN domain containing protein 16, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=7.3e-16  Score=89.85  Aligned_cols=60  Identities=38%  Similarity=0.737  Sum_probs=57.0

Q ss_pred             hcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .+.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.....|..|+++|++
T Consensus        12 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~   71 (77)
T 2cot_A           12 QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGEKPYKCDECGKAFIQRSHLIGHHRVHTG   71 (77)
T ss_dssp             CCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCSCSEECSSSCCEESSHHHHHHHGGGSCC
T ss_pred             cCCCCCCEECCCCCcccCCHHHHHHHHHHcCCCcCeeCCCCCCccCCHHHHHHHHHHhCC
Confidence            456789999999999999999999999999999999999999999999999999999986

>1x6h_A Transcriptional repressor CTCF; zinc finger protein, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.60  E-value=6.5e-16  Score=91.91  Aligned_cols=80  Identities=20%  Similarity=0.349  Sum_probs=70.9

Q ss_pred             HHHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCC----CCcccccCcccCCChhHHHhhhhhhcCCCchhhhhh
Q psy9067          22 LLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGV----KPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRH   97 (189)
Q Consensus        22 ~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~----~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~   97 (189)
                      .|..|+++|.++++|.|+.|++.|.....|..|+..++..    ++|.|..|++.|.....|..|++.            
T Consensus         2 s~~~H~~~H~~~k~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~~~~~C~~C~~~f~~~~~L~~H~~~------------   69 (86)
T 1x6h_A            2 SSGSSGRTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPNFVPAAFVCSKCGKTFTRRNTMARHADN------------   69 (86)
T ss_dssp             TTTCCSTTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCSSCCCCCEECSSSCCEESCHHHHHHHHHH------------
T ss_pred             CcccccceecCCCCCcCCCCCCccCCHHHHHHHHHHhcCCcCCCcceECCCCCChhCCHHHHHHHHHH------------
Confidence            3557899999999999999999999999999999887765    789999999999999999999985            


Q ss_pred             hhhccCCCCCccCCCCCccc
Q psy9067          98 VRYKHTHEKPHKCSICDYAS  117 (189)
Q Consensus        98 ~~~~~~~~~~~~C~~C~~~~  117 (189)
                          +.++.++.|..|+..+
T Consensus        70 ----h~~~~~~~~~~~~~~~   85 (86)
T 1x6h_A           70 ----CAGPDGVEGENSGPSS   85 (86)
T ss_dssp             ----CCCCCSCCCCCCCCCC
T ss_pred             ----ccCCCCcccCCCCCCC
Confidence                6667788888888754

>2wbt_A B-129; zinc finger; 2.70A {Sulfolobus virus 1}

Probab=99.58  E-value=1.1e-16  Score=102.66  Aligned_cols=112  Identities=14%  Similarity=0.117  Sum_probs=82.7

Q ss_pred             hCCCCCcccCCCCCccccchhhHHHHHhhc---CCCCCcccccCcccCC------ChhHHHhhhhhhcCCCchhhhhhhh
Q psy9067          29 SHSEERPHKCSVCERGFKTIASLQNHINTH---TGVKPHKCKYCESRFT------TSGELVRHVRYKHTHEKPELVRHVR   99 (189)
Q Consensus        29 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~---~~~~~~~C~~C~~~f~------~~~~l~~h~~~~h~~~~~~~~~~~~   99 (189)
                      .+++.++|.|...+....  ..+..+...+   ..++.+.|++|.+.|.      ....|..|+.               
T Consensus         6 ~~~~~k~~~~~~k~~~~~--~s~ee~~~~~~l~~~~~~~~c~~~~~~~~~~~~~~~~~~l~~h~~---------------   68 (129)
T 2wbt_A            6 VDSGSKKYLSNHKGIFIH--VTLEELKRYHQLTPEQKRLIRAIVKTLIHNPQLLDESSYLYRLLA---------------   68 (129)
T ss_dssp             CCTTCCGGGGCSSCEEEE--CCHHHHHHHTTSCHHHHHHHHHHHHHHHHCGGGTTTHHHHHHHHH---------------
T ss_pred             hcccccccccccCCeeee--ecHHhhhccccCChhhCcccchhhhcccCCCcccCCHHHHHHHHH---------------
Confidence            466788888876554322  2233332222   2334567777766554      5666666664               


Q ss_pred             hccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         100 YKHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       100 ~~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                        +.++++|.|+.||+.|.....|..|++.|  ++||.|++|++.|.....|..|+++|++.
T Consensus        69 --h~~~~~~~C~~C~k~f~~~~~l~~H~~~H--~~~~~C~~C~k~f~~~~~l~~H~~~h~~~  126 (129)
T 2wbt_A           69 --SKAISQFVCPLCLMPFSSSVSLKQHIRYT--EHTKVCPVCKKEFTSTDSALDHVCKKHNI  126 (129)
T ss_dssp             --HHHHCSEECTTTCCEESSHHHHHHHHHHT--CCCCBCTTTCCBCSSHHHHHHHHHHTTCC
T ss_pred             --hCCCCCeECCCCCcccCCHhHHHHHHHHC--CCCCCCCCCCcccCCHHHHHHHHHHHCCc
Confidence              45578899999999999999999999998  88999999999999999999999998874

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.58  E-value=1.3e-15  Score=89.03  Aligned_cols=58  Identities=26%  Similarity=0.587  Sum_probs=41.8

Q ss_pred             cCCCCCccCccCCccCCChHHHHHHHHHhhC---CCcccCccchhccCCchHHHHHHhhhC
Q psy9067         130 HTGERPYQCAHCTYASPDTFKLKRHLRIHTG---EKPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       130 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~---~~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      |.+++||.|.+|++.|.....|..|+++|.+   +++|.|.+|++.|...+.|..|++.+|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H   62 (78)
T 2d9h_A            2 SSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSH   62 (78)
T ss_dssp             CCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTS
T ss_pred             CCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhC
Confidence            4566777777777777777777777777764   677777777777777777777775443

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=2.2e-15  Score=83.42  Aligned_cols=55  Identities=44%  Similarity=0.791  Sum_probs=46.8

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHH-hhhCC
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHR-LIHTP  188 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~  188 (189)
                      +||.|++|++.|.....|..|+++|+++++|.|++|++.|.+.+.|..|+ ++|.+
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~   56 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSG   56 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCC
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCC
Confidence            47888889888988888888988888888899999999999988899996 56654

>1x5w_A Zinc finger protein 64, isoforms 1; ZNF338, nuclear protein, DNA binding, transcription, C2H2 type zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.57  E-value=4.6e-15  Score=84.75  Aligned_cols=60  Identities=27%  Similarity=0.597  Sum_probs=57.1

Q ss_pred             hcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .+.++++|.|++|++.|.....|..|+++|+++++|.|++|++.|.+...|..|+++|++
T Consensus         3 s~~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C~~~f~~~~~L~~H~~~h~~   62 (70)
T 1x5w_A            3 SGSSGHPEKCSECSYSCSSKAALRIHERIHCTDRPFKCNYCSFDTKQPSNLSKHMKKFHG   62 (70)
T ss_dssp             SCCCCCSEECSSSSCEESSHHHHHHHHGGGCCSCSEECSSSSCEESSHHHHHHHHHHHHS
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCEeCCCCCCccCCHHHHHHHHHHHhC
Confidence            466789999999999999999999999999999999999999999999999999999875

>2j7j_A Transcription factor IIIA; zinc finger module, alternative initiation, nuclear protein, phosphorylation, hydrophobic core, zinc, RNA-binding; 1.65A {Xenopus laevis} SCOP: g.37.1.1 g.37.1.1 g.37.1.1 PDB: 1un6_B 2hgh_A

Probab=99.57  E-value=3e-15  Score=88.74  Aligned_cols=77  Identities=27%  Similarity=0.458  Sum_probs=71.9

Q ss_pred             eee--CCCcceeeechhHHHHHHhhCCCCCcccCCC--CCccccchhhHHHHHhhcCCCCCccccc---CcccCCChhHH
Q psy9067           7 YWS--DTTGYLRYHVMYLLARHLKSHSEERPHKCSV--CERGFKTIASLQNHINTHTGVKPHKCKY---CESRFTTSGEL   79 (189)
Q Consensus         7 ~~c--~~c~~~~f~~~~~l~~h~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~~~~~~~~~C~~---C~~~f~~~~~l   79 (189)
                      |.|  ..|+ ..|.....|..|+++|.++++|.|+.  |++.|.....|..|++.|++   |.|..   |++.|.....|
T Consensus         2 ~~C~~~~C~-~~f~~~~~l~~H~~~h~~~~~~~C~~~~C~~~f~~~~~l~~H~~~h~~---~~C~~~~~C~~~f~~~~~l   77 (85)
T 2j7j_A            2 YVCHFENCG-KAFKKHNQLKVHQFSHTQQLPYECPHEGCDKRFSLPSRLKRHEKVHAG---YPCKKDDSCSFVGKTWTLY   77 (85)
T ss_dssp             EECCSTTCC-CEESSHHHHHHHHHHHHTTCCEECCSTTCCCEESSHHHHHHHHHHHHS---EECCSCSSCCCEESSHHHH
T ss_pred             ccCCCCCCC-cccCCHHHHHHHHHHhCCCCCeeCCCCCCcCccCCHHHHHHHHHHhCC---CCCCCCCCCCCccCCHHHH
Confidence            678  8899 69999999999999999999999998  99999999999999999987   99999   99999999999


Q ss_pred             Hhhhhhhc
Q psy9067          80 VRHVRYKH   87 (189)
Q Consensus        80 ~~h~~~~h   87 (189)
                      ..|++.+|
T Consensus        78 ~~H~~~hh   85 (85)
T 2j7j_A           78 LKHVAECH   85 (85)
T ss_dssp             HHHHHHCC
T ss_pred             HHHHHhcC
Confidence            99998643

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.55  E-value=3.8e-15  Score=85.80  Aligned_cols=60  Identities=40%  Similarity=0.785  Sum_probs=53.8

Q ss_pred             hhcCCCCCccCc--cCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhC
Q psy9067         128 RSHTGERPYQCA--HCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       128 ~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      ..+.++++|.|+  .|++.|.....|..|+++|.++++|.|++||+.|.+.+.|..|+++|+
T Consensus        12 ~~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           12 YVVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             ccCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            346678899997  599999999999999999999999999999999999999999999874

>2ct1_A Transcriptional repressor CTCF; CCCTC-BINDING factor, zinc finger, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.8e-15  Score=88.11  Aligned_cols=69  Identities=25%  Similarity=0.506  Sum_probs=61.3

Q ss_pred             HHHHHhhCCCCCcccCCCCCccccchhhHHHHHh-hcCCC-CCcccccCcccCCChhHHHhhhhhhcCCCc
Q psy9067          23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHIN-THTGV-KPHKCKYCESRFTTSGELVRHVRYKHTHEK   91 (189)
Q Consensus        23 l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~-~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~   91 (189)
                      |..|+++|.++++|.|+.|++.|.....|..|+. .|.++ ++|.|+.|++.|.....|..|++.+|....
T Consensus         3 ~~~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~h~~~~~~~~C~~C~~~f~~~~~L~~H~~~~H~~~~   73 (77)
T 2ct1_A            3 SGSSGRTHSGEKPYECYICHARFTQSGTMKMHILQKHTENVAKFHCPHCDTVIARKSDLGVHLRKQHSYSG   73 (77)
T ss_dssp             CCCCCCCCSCCCSEECTTTCCEESCHHHHHHHHHHHSSSSCSSEECSSSSCEESSHHHHHHHHHHTSCCSC
T ss_pred             CCccccccCCCCCeECCCcCchhCCHHHHHHHHHHhcCCCCCccCCCCCCCccCCHHHHHHHHHHhCCCCC
Confidence            4468899999999999999999999999999997 56654 799999999999999999999998776543

>2ctd_A Zinc finger protein 512; zinc binding, two ZF-C2H2 domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.54  E-value=1.3e-14  Score=88.05  Aligned_cols=77  Identities=13%  Similarity=0.257  Sum_probs=66.4

Q ss_pred             ccCCChhHHHhhhhhhcCCCchhhhhhhhhccCCCCCccCCCCCccc-cchHHHHhchhhcCCCCCccCccCCccCCChH
Q psy9067          71 SRFTTSGELVRHVRYKHTHEKPELVRHVRYKHTHEKPHKCSICDYAS-VELSKMRNHMRSHTGERPYQCAHCTYASPDTF  149 (189)
Q Consensus        71 ~~f~~~~~l~~h~~~~h~~~~~~~~~~~~~~~~~~~~~~C~~C~~~~-~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~  149 (189)
                      ..|.....|..|+..                +.++++|.|+.|++.| .....|..|++.| +++||.|.+|++.|....
T Consensus        14 ~~~~~~~~~~~~~~~----------------~~~~~~~~C~~C~k~F~~~~~~L~~H~~~h-~~k~~~C~~Cgk~F~~~~   76 (96)
T 2ctd_A           14 PVYAAGSLEEQWYLE----------------IVDKGSVSCPTCQAVGRKTIEGLKKHMENC-KQEMFTCHHCGKQLRSLA   76 (96)
T ss_dssp             CSSCTTCHHHHHHHH----------------HHHTSCEECTTTCSCEESSHHHHHHHHHHH-CCCCCCCSSSCCCCSSHH
T ss_pred             CCCCCchHHHHHHHH----------------hcCCCCcCCCCCCCCcccCHHHHHHHHHHH-CCCCeECCCCCCeeCCHH
Confidence            456667777777763                5567889999999999 9999999999999 999999999999999999


Q ss_pred             HHHHH-HHHhhCCCcc
Q psy9067         150 KLKRH-LRIHTGEKPY  164 (189)
Q Consensus       150 ~l~~H-~~~h~~~~~~  164 (189)
                      .|..| +++|+++..+
T Consensus        77 ~L~~H~~~~H~~~p~~   92 (96)
T 2ctd_A           77 GMKYHVMANHNSLPSG   92 (96)
T ss_dssp             HHHHHHHHHTCCCSSC
T ss_pred             HHHHHhHHhcCCCCCC
Confidence            99999 8888765444

>1x6e_A Zinc finger protein 24; ZNF24, KOX17, ZNF191, zscan3, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.53  E-value=1.2e-14  Score=83.41  Aligned_cols=62  Identities=40%  Similarity=0.630  Sum_probs=58.7

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCC
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      .+.++++|.|+.|++.|.....|..|++.|.+++||.|++|++.|.....|..|+++|+++.
T Consensus         8 ~H~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~C~~C~~~f~~~~~L~~H~~~H~~~~   69 (72)
T 1x6e_A            8 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGEKPYKCLECGKAFSQNSGLINHQRIHTSGP   69 (72)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCSCCEECSSSCCEESSHHHHHHHHHHHHSSS
T ss_pred             ccCCCCCccCCCCCCccCCHHHHHHHHHhcCCCCCeECCCCCcccCCHHHHHHHHHhcCCCC
Confidence            47788999999999999999999999999999999999999999999999999999998764

>2gqj_A Zinc finger protein KIAA1196; ZF-C2H2 like domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.52  E-value=2.8e-15  Score=91.43  Aligned_cols=66  Identities=18%  Similarity=0.359  Sum_probs=61.6

Q ss_pred             ccCCCCCccCCCCCcccc-chHHHHhchhhcCC-CCCccCccCCccCCChHHHHHHHHHhhCCCcccC
Q psy9067         101 KHTHEKPHKCSICDYASV-ELSKMRNHMRSHTG-ERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC  166 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~-~~~~l~~H~~~~~~-~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  166 (189)
                      .+.++++|.|+.|++.|. ....|..|++.|.+ +++|.|.+|++.|.....|..|+++|+++++..-
T Consensus        18 ~h~~~~~~~C~~C~k~f~~~~~~L~~H~~~h~~~~~~~~C~~C~k~F~~~~~L~~H~~~h~~~kp~~~   85 (98)
T 2gqj_A           18 AIHERGEAVCPTCNVVTRKTLVGLKKHMEVCQKLQDALKCQHCRKQFKSKAGLNYHTMAEHSAKPSDA   85 (98)
T ss_dssp             TTTTTSCCCCTTTCCCCSSCSHHHHHHHHHHHHHHHHHSCSSSCCCCSCHHHHHHHHHHHSCSCSSCC
T ss_pred             HhccCCCcCCCCCCCChhhhHHHHHHHHHHHcCCCCCEECCCCCCccCCHHHHHHHHHHHcCCCCCCC
Confidence            477889999999999999 99999999999998 9999999999999999999999999999988543

>2lv2_A Insulinoma-associated protein 1; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Homo sapiens}

Probab=99.52  E-value=1.5e-14  Score=85.35  Aligned_cols=61  Identities=26%  Similarity=0.543  Sum_probs=54.6

Q ss_pred             hhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhhhhhcC
Q psy9067          28 KSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHT   88 (189)
Q Consensus        28 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~   88 (189)
                      ..+...++|.|++|++.|.....|..|++.|++++||.|..|++.|.....|..|++..|.
T Consensus        21 ~~~~~~~~h~C~~Cgk~F~~~~~L~~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~   81 (85)
T 2lv2_A           21 GLSASAECHLCPVCGESFASKGAQERHLRLLHAAQVFPCKYCPATFYSSPGLTRHINKCHP   81 (85)
T ss_dssp             SSCCCCTTEECTTSCCEESSHHHHHHHHHTTSCSSSEECTTSSCEESSHHHHHHHHHTTCT
T ss_pred             CCCCCCCCEECCCCCCCcCcHHHHhhhhhhccCCCccCCCCCCCEeCCHHHHHHhCcccCc
Confidence            3455677899999999999999999999999999999999999999999999999865443

>2ghf_A ZHX1, zinc fingers and homeoboxes protein 1; C2H2 zinc fingers, 4-stranded parallel/anti-parallel beta- sheet, structural genomics; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1

Probab=99.52  E-value=1.2e-14  Score=88.71  Aligned_cols=71  Identities=17%  Similarity=0.292  Sum_probs=61.5

Q ss_pred             hhCCCCCcccCCCCCccccchhhHHHHHhh-c---CCCCCcccccCcccCCChhHHHhh-hhhhcCCCchhhhhhhhhcc
Q psy9067          28 KSHSEERPHKCSVCERGFKTIASLQNHINT-H---TGVKPHKCKYCESRFTTSGELVRH-VRYKHTHEKPELVRHVRYKH  102 (189)
Q Consensus        28 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-~---~~~~~~~C~~C~~~f~~~~~l~~h-~~~~h~~~~~~~~~~~~~~~  102 (189)
                      +...+++||.|+.|++.|.....|..|++. |   .++++|.|..|++.|.....|..| ++                .+
T Consensus        11 ~~~~gekpy~C~~Cgk~F~~~~~L~~H~r~~H~~~~~ekpf~C~~Cgk~F~~~~~L~~H~~r----------------~H   74 (102)
T 2ghf_A           11 QNKKVEGGYECKYCTFQTPDLNMFTFHVDSEHPNVVLNSSYVCVECNFLTKRYDALSEHNLK----------------YH   74 (102)
T ss_dssp             TCCCCCSSEECSSCSCEESCHHHHHHHHHHHCSSCCCSCCEEETTTTEEESSTHHHHTHHHH----------------TS
T ss_pred             ccCCCCcCcCCCCCCCccCCHHHHHHHHHhhCCCCCCCCCcCCCCCCcccCCHHHHHHHHHH----------------hc
Confidence            456688999999999999999999999974 7   568899999999999999999999 66                47


Q ss_pred             CCCCCccCCCCC
Q psy9067         103 THEKPHKCSICD  114 (189)
Q Consensus       103 ~~~~~~~C~~C~  114 (189)
                      .++++|.|..+.
T Consensus        75 tgekpy~C~~~~   86 (102)
T 2ghf_A           75 PGEENFKLTMVK   86 (102)
T ss_dssp             TTCCCEEEEECC
T ss_pred             CCCCCeeCCccc
Confidence            788899998754

>3uk3_C Zinc finger protein 217; transcription factor, DNA binding, DNA-metal BI protein complex; 2.10A {Homo sapiens}

Probab=99.51  E-value=1e-14  Score=79.77  Aligned_cols=56  Identities=34%  Similarity=0.688  Sum_probs=50.7

Q ss_pred             CCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhC
Q psy9067         105 EKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       105 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  160 (189)
                      +++|.|+.|++.|.....|..|++.|.+++||.|++|++.|.....|..|+++|++
T Consensus         2 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~hh~   57 (57)
T 3uk3_C            2 SSSRECSYCGKFFRSNYYLNIHLRTHTGEKPYKCEFCEYAAAQKTSLRYHLERHHK   57 (57)
T ss_dssp             ---CBCTTTCCBCSCHHHHHHHHHHHHCCCCEECSSSSCEESSHHHHHHHHHHHC-
T ss_pred             CCCccCCCCcchhCChHHHHHHHHHcCCCCCcCCCCCcchhCCHHHHHHHHHHhcC
Confidence            56899999999999999999999999999999999999999999999999998863

>1bbo_A Human enhancer-binding protein MBP-1; DNA-binding protein; HET: ABA; NMR {Homo sapiens} SCOP: g.37.1.1 g.37.1.1 PDB: 3znf_A 4znf_A

Probab=99.50  E-value=2.3e-14  Score=78.41  Aligned_cols=56  Identities=27%  Similarity=0.608  Sum_probs=53.4

Q ss_pred             CccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCC
Q psy9067         107 PHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       107 ~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      +|.|+.|++.|.....|..|++.|.+++||.|++|++.|.....|..|+++|++++
T Consensus         1 p~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~k   56 (57)
T 1bbo_A            1 KYICEECGIRXKKPSMLKKHIRTHTDVRPYHCTYCNFSFKTKGNLTKHMKSKAHSK   56 (57)
T ss_dssp             CCBCTTTCCBCSSHHHHHHHHHHTSSCCCEECSSSSCEESSHHHHHHHHHSSSSCC
T ss_pred             CCcCCCCcCcCCCHHHHHHHHHhcCCCCCccCCCCCchhcCHHHHHHHHHHhcccC
Confidence            58999999999999999999999999999999999999999999999999998764

>2drp_A Protein (tramtrack DNA-binding domain); protein-DNA complex, double helix, transcription/DNA complex; HET: DNA; 2.80A {Drosophila melanogaster} SCOP: g.37.1.1 g.37.1.1

Probab=99.47  E-value=2.7e-14  Score=80.53  Aligned_cols=61  Identities=30%  Similarity=0.590  Sum_probs=55.3

Q ss_pred             hhCCCCCcccCCCCCccccchhhHHHHHhh-c-CCCCCcccccCcccCCChhHHHhhhhhhcC
Q psy9067          28 KSHSEERPHKCSVCERGFKTIASLQNHINT-H-TGVKPHKCKYCESRFTTSGELVRHVRYKHT   88 (189)
Q Consensus        28 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~-~-~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~   88 (189)
                      ++|.++++|.|+.|++.|.....|..|+.. | .++++|.|+.|++.|.....|..|++.+|.
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~~H~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~   65 (66)
T 2drp_A            3 FTKEGEHTYRCKVCSRVYTHISNFCRHYVTSHKRNVKVYPCPFCFKEFTRKDNMTAHVKIIHK   65 (66)
T ss_dssp             CEEEETTEEECTTTCCEESSHHHHHHHHHHHSSSSCCCEECTTTCCEESCHHHHHHHHHHHTC
T ss_pred             cccCCCcceECCCCcchhCCHHHHHHHHHHHcCCCCcCeECCCCCCccCCHHHHHHHHHHHcC
Confidence            467788999999999999999999999998 6 588999999999999999999999987654

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.47  E-value=1.9e-14  Score=81.20  Aligned_cols=56  Identities=21%  Similarity=0.297  Sum_probs=45.6

Q ss_pred             CCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc-cchhccCCchHHHHHHhhhCC
Q psy9067         131 TGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD-ICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       131 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .+++||.|+.|++.|. ...|..|+++ ++++||.|+ .||+.|..++.|..|+++|-|
T Consensus         6 C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~   62 (66)
T 2eod_A            6 SGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCN   62 (66)
T ss_dssp             CCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSS
T ss_pred             CCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcc
Confidence            4567888888888888 8888888887 888888888 888888888888888888755

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.45  E-value=2e-13  Score=82.57  Aligned_cols=62  Identities=24%  Similarity=0.409  Sum_probs=56.0

Q ss_pred             CCccCCCCCccccchHHHHhchhh-cCCCCC--------ccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         106 KPHKCSICDYASVELSKMRNHMRS-HTGERP--------YQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       106 ~~~~C~~C~~~~~~~~~l~~H~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      ..+.|+.|++.|.....|..|++. |.++++        |.|++|++.|.....|..|+++|++++||.|+
T Consensus        24 ~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           24 LSRPKKSCDRTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSSCCCCCCCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCCcccccccccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            346799999999999999999987 888777        89999999999999999999999999999986

>2d9h_A Zinc finger protein 692; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.44  E-value=8.9e-14  Score=81.05  Aligned_cols=63  Identities=22%  Similarity=0.411  Sum_probs=56.7

Q ss_pred             hCCCCCcccCCCCCccccchhhHHHHHhhcCC---CCCcccccCcccCCChhHHHhhhhhhcCCCc
Q psy9067          29 SHSEERPHKCSVCERGFKTIASLQNHINTHTG---VKPHKCKYCESRFTTSGELVRHVRYKHTHEK   91 (189)
Q Consensus        29 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~---~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~   91 (189)
                      +|.++++|.|+.|++.|.....|..|++.|.+   +++|.|..|++.|.....|..|++.+|....
T Consensus         1 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~~~~~~~~C~~C~k~f~~~~~L~~H~~~~H~~~~   66 (78)
T 2d9h_A            1 GSSGSSGLQCEICGFTCRQKASLNWHQRKHAETVAALRFPCEFCGKRFEKPDSVAAHRSKSHPALL   66 (78)
T ss_dssp             CCCSCCCEECSSSCCEESSHHHHHHHHHHHHHHTTTCCEECTTTCCEESSHHHHHHHHHHTSTTTS
T ss_pred             CCCCCcCeECCCCCCeeCCHHHHHHHHHHhhccCCCcccCCCCCCchhCCHHHHHHHHHHhCCCCC
Confidence            36789999999999999999999999999985   8899999999999999999999976565543

>2adr_A ADR1; transcription regulation, zinc finger,; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 g.37.1.1

Probab=99.43  E-value=1.3e-13  Score=76.12  Aligned_cols=56  Identities=36%  Similarity=0.714  Sum_probs=52.1

Q ss_pred             CCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHH-HHhhCC
Q psy9067         106 KPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHL-RIHTGE  161 (189)
Q Consensus       106 ~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~-~~h~~~  161 (189)
                      ++|.|+.|++.|.....|..|++.|.+++||.|++|++.|.....|..|+ ++|.++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~~H~~~   57 (60)
T 2adr_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNEKPYPCGLCNRAFTRRDLLIRHAQKIHSGN   57 (60)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSCSEECTTTCCEESSHHHHHHHHTTTSCCS
T ss_pred             CcCcCCCCccccCCHHHHHHHHHHhCCCCCccCCCCCCccCCHHHHHHHHHHHcCCc
Confidence            47999999999999999999999999999999999999999999999997 577654

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.42  E-value=4e-16  Score=89.90  Aligned_cols=62  Identities=19%  Similarity=0.327  Sum_probs=55.4

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .+.++++|.|+.||+.|.....|..       +++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus        12 ~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~H~~~~~~~C~~C   73 (73)
T 2ctu_A           12 IHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGNESGKKTSGPSSG   73 (73)
T ss_dssp             CCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSCCCCCCCSSCCCC
T ss_pred             HhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHhhcCCCCCCCCCC
Confidence            4677888999999999998887765       6889999999999999999999999999999999987

>1f2i_G Fusion of N-terminal 17-MER peptide extension to ZIF12; zinc finger, dimer, protein-DNA complex, cooperativity, transcription/DNA complex; 2.35A {Mus musculus} SCOP: g.37.1.1 g.37.1.1

Probab=99.40  E-value=1.4e-13  Score=79.09  Aligned_cols=59  Identities=31%  Similarity=0.620  Sum_probs=55.4

Q ss_pred             ccCCCCCccCC--CCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhh
Q psy9067         101 KHTHEKPHKCS--ICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       101 ~~~~~~~~~C~--~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  159 (189)
                      .+.++++|.|+  .|++.|.....|..|++.|.++++|.|++|++.|.....|..|+++|+
T Consensus        13 ~~~~~~~~~C~~~~C~k~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~Ht   73 (73)
T 1f2i_G           13 VVPKMRPYACPVESCDRRFSRSDELTRHIRIHTGQKPFQCRICMRNFSRSDHLTTHIRTHT   73 (73)
T ss_dssp             CCCCCCCEECSSTTBCCEESSHHHHHHHHHHHHCCCCEECTTTCCEESCHHHHHHHHTTCC
T ss_pred             cCCCCCccCCcCCCCCCccCCHHHHHHHHHhhCCCCCeECCCCCchhCCHHHHHHHHHhcC
Confidence            67888999997  599999999999999999999999999999999999999999998873

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.40  E-value=2.1e-13  Score=78.18  Aligned_cols=57  Identities=40%  Similarity=0.754  Sum_probs=49.0

Q ss_pred             cCCCCCccCcc--CCccCCChHHHHHHHHHhhCCCcccCcc--chhccCCchHHHHHHhhh
Q psy9067         130 HTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEKPYACDI--CHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       130 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  186 (189)
                      ....++|.|.+  |++.|.....|..|+++|+++++|.|.+  |++.|.....|..|+++|
T Consensus        12 ~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           12 SSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             ccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            34567888887  9999999999999999999999999965  999999999999998876

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.39  E-value=3.4e-13  Score=70.32  Aligned_cols=45  Identities=42%  Similarity=0.661  Sum_probs=41.7

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.1e-13  Score=69.97  Aligned_cols=45  Identities=31%  Similarity=0.500  Sum_probs=41.7

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478888999999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.1e-13  Score=70.47  Aligned_cols=45  Identities=38%  Similarity=0.493  Sum_probs=42.1

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|+++|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=4.2e-13  Score=69.94  Aligned_cols=45  Identities=33%  Similarity=0.520  Sum_probs=41.6

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            578888999999999999999999999999999999999999987

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.38  E-value=4.1e-13  Score=69.97  Aligned_cols=45  Identities=33%  Similarity=0.565  Sum_probs=41.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|+++|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            2 SSGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.38  E-value=3.6e-13  Score=70.16  Aligned_cols=45  Identities=33%  Similarity=0.502  Sum_probs=41.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            578889999999999999999999999999999999999999987

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.4e-13  Score=70.31  Aligned_cols=45  Identities=38%  Similarity=0.600  Sum_probs=40.2

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            477888889999999999999999999999999999999999887

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.5e-13  Score=70.22  Aligned_cols=45  Identities=40%  Similarity=0.568  Sum_probs=41.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            478888999999999999999999999999999999999999987

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.3e-13  Score=70.33  Aligned_cols=45  Identities=44%  Similarity=0.643  Sum_probs=41.9

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|+++|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            478889999999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.4e-13  Score=70.31  Aligned_cols=45  Identities=38%  Similarity=0.620  Sum_probs=41.2

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.37  E-value=3.4e-13  Score=70.27  Aligned_cols=45  Identities=27%  Similarity=0.496  Sum_probs=40.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            477888899999999999999999999999999999999999887

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.2e-13  Score=70.41  Aligned_cols=45  Identities=38%  Similarity=0.596  Sum_probs=40.8

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.8e-13  Score=70.13  Aligned_cols=45  Identities=31%  Similarity=0.414  Sum_probs=42.0

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            578889999999999999999999999999999999999999987

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.4e-13  Score=70.30  Aligned_cols=45  Identities=38%  Similarity=0.592  Sum_probs=40.9

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.37  E-value=4.1e-13  Score=69.26  Aligned_cols=44  Identities=27%  Similarity=0.434  Sum_probs=39.4

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      |++.|.+++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56778888999999999999999999999999999999999887

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=4.2e-13  Score=69.92  Aligned_cols=45  Identities=36%  Similarity=0.588  Sum_probs=41.4

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999987

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.37  E-value=3.5e-13  Score=70.24  Aligned_cols=45  Identities=38%  Similarity=0.635  Sum_probs=41.0

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=5.2e-13  Score=69.60  Aligned_cols=45  Identities=29%  Similarity=0.486  Sum_probs=40.4

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            2 SSGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467788899999999999999999999999999999999999887

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.3e-13  Score=69.90  Aligned_cols=45  Identities=49%  Similarity=0.718  Sum_probs=40.7

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|+++|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=6.5e-13  Score=69.22  Aligned_cols=45  Identities=36%  Similarity=0.603  Sum_probs=41.6

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|+++|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            2 SSGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             CSCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367888999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.8e-13  Score=69.69  Aligned_cols=45  Identities=36%  Similarity=0.487  Sum_probs=40.9

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.36  E-value=4.1e-13  Score=69.99  Aligned_cols=45  Identities=36%  Similarity=0.567  Sum_probs=40.6

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.8e-13  Score=69.71  Aligned_cols=45  Identities=38%  Similarity=0.525  Sum_probs=41.0

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|+++|.+++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            577888899999999999999999999999999999999999886

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=4.7e-13  Score=69.74  Aligned_cols=45  Identities=42%  Similarity=0.590  Sum_probs=40.8

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.36  E-value=3.5e-13  Score=70.24  Aligned_cols=45  Identities=42%  Similarity=0.637  Sum_probs=40.7

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|+++|.+++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=5.9e-13  Score=69.37  Aligned_cols=45  Identities=42%  Similarity=0.674  Sum_probs=40.7

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|+++|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.6e-13  Score=70.18  Aligned_cols=45  Identities=38%  Similarity=0.621  Sum_probs=41.6

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            477888999999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=4.6e-13  Score=69.78  Aligned_cols=45  Identities=38%  Similarity=0.600  Sum_probs=40.8

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.6e-13  Score=70.21  Aligned_cols=45  Identities=40%  Similarity=0.594  Sum_probs=39.8

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999887

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.35  E-value=3.2e-13  Score=70.39  Aligned_cols=45  Identities=33%  Similarity=0.462  Sum_probs=39.7

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=6.6e-13  Score=69.18  Aligned_cols=45  Identities=36%  Similarity=0.562  Sum_probs=40.2

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            2 SSGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            477788889999999999999999999999999999999999887

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.35  E-value=3.5e-13  Score=70.27  Aligned_cols=45  Identities=33%  Similarity=0.499  Sum_probs=39.2

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            2 SSGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             ccccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888899999999999999999999988988899998877

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.35  E-value=3.7e-13  Score=70.16  Aligned_cols=45  Identities=31%  Similarity=0.414  Sum_probs=40.4

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888889999999999999999999999999999999999887

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.34  E-value=4.9e-13  Score=69.64  Aligned_cols=45  Identities=29%  Similarity=0.331  Sum_probs=41.1

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            577888899999999999999999999999999999999999887

>2ctu_A Zinc finger protein 483; zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=3.5e-15  Score=85.85  Aligned_cols=71  Identities=21%  Similarity=0.249  Sum_probs=62.5

Q ss_pred             hhHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhhhhhcCCCchhhhhhhh
Q psy9067          20 MYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEKPELVRHVR   99 (189)
Q Consensus        20 ~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~~h~~~~~~~~~~~~   99 (189)
                      ...|..|+++|.++++|.|+.|++.|.....|..       +++|.|..|++.|.....|..|++.              
T Consensus         3 ~~~l~~H~~~h~~~~~~~C~~C~k~f~~~~~l~~-------~~~~~C~~C~~~f~~~~~l~~H~~~--------------   61 (73)
T 2ctu_A            3 SGSSGKRQKIHLGDRSQKCSKCGIIFIRRSTLSR-------RKTPMCEKCRKDSCQEAALNKDEGN--------------   61 (73)
T ss_dssp             CCSCCCCCCCCCCCSEEECSSSCCEEECCCCCCC-------SSSCCCHHHHHTCSCCCSSCCCSSC--------------
T ss_pred             chhHHHHHHHhCCCCCeeCCcccchhCCHHHhCc-------CCCCCCCCCChhhcCHHHHHHHHHh--------------
Confidence            3457789999999999999999999998888766       7899999999999999999999884              


Q ss_pred             hccCCCCCccCCCC
Q psy9067         100 YKHTHEKPHKCSIC  113 (189)
Q Consensus       100 ~~~~~~~~~~C~~C  113 (189)
                        +.++++|.|++|
T Consensus        62 --H~~~~~~~C~~C   73 (73)
T 2ctu_A           62 --ESGKKTSGPSSG   73 (73)
T ss_dssp             --CCCCCCSSCCCC
T ss_pred             --hcCCCCCCCCCC
Confidence              677788999877

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.34  E-value=5e-13  Score=69.63  Aligned_cols=45  Identities=36%  Similarity=0.547  Sum_probs=39.8

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999887

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.34  E-value=5.8e-13  Score=69.39  Aligned_cols=45  Identities=36%  Similarity=0.506  Sum_probs=39.4

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            2 SSGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467788888899999999999999999999999999999999887

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=5.3e-13  Score=69.53  Aligned_cols=45  Identities=27%  Similarity=0.312  Sum_probs=40.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888889999999999999999999999999999999999887

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=8.2e-13  Score=68.80  Aligned_cols=45  Identities=22%  Similarity=0.239  Sum_probs=40.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            2 SSGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CCSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             CcccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467788889999999999999999999999999999999999887

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5.5e-13  Score=69.49  Aligned_cols=45  Identities=36%  Similarity=0.552  Sum_probs=40.6

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|+++|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999887

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.33  E-value=7.9e-13  Score=68.86  Aligned_cols=45  Identities=29%  Similarity=0.479  Sum_probs=39.9

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|+++++|.|++|
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            2 SSGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367788888999999999999999999999999999999999887

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=5e-13  Score=69.64  Aligned_cols=45  Identities=33%  Similarity=0.606  Sum_probs=39.7

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888888999999999999999999999999999999999887

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.33  E-value=7.8e-13  Score=68.90  Aligned_cols=45  Identities=31%  Similarity=0.538  Sum_probs=39.2

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|+++|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            2 SSGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367778888899999999999999999999999999999999887

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.33  E-value=9.8e-13  Score=68.51  Aligned_cols=45  Identities=33%  Similarity=0.554  Sum_probs=40.8

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|+++|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            2 SSGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            367788899999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.33  E-value=8.8e-13  Score=71.19  Aligned_cols=46  Identities=24%  Similarity=0.542  Sum_probs=31.0

Q ss_pred             cCCCCCccCccCCccCCChHHHHHHHH-HhhCCCcccCccchhccCC
Q psy9067         130 HTGERPYQCAHCTYASPDTFKLKRHLR-IHTGEKPYACDICHARFTQ  175 (189)
Q Consensus       130 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C~~~f~~  175 (189)
                      +.+++||.|++|++.|.....|..|++ +|.++++|.|.+|++.|++
T Consensus         7 ~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            7 GSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            445666777777777777777777765 6666777777777776654

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=3.9e-13  Score=70.07  Aligned_cols=45  Identities=36%  Similarity=0.647  Sum_probs=37.0

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467777888888888888888888888888888888888888876

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=7.5e-13  Score=68.94  Aligned_cols=45  Identities=44%  Similarity=0.654  Sum_probs=40.1

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477888889999999999999999999999999999999999875

>2eod_A TNF receptor-associated factor 4; zinc binding, NF-KB, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.32  E-value=5.9e-13  Score=74.97  Aligned_cols=60  Identities=17%  Similarity=0.373  Sum_probs=54.9

Q ss_pred             cCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCc-cCCccCCChHHHHHHHHHhhCCCc
Q psy9067         102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCA-HCTYASPDTFKLKRHLRIHTGEKP  163 (189)
Q Consensus       102 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~-~C~~~f~~~~~l~~H~~~h~~~~~  163 (189)
                      .-+.++|.|+.|++.|. ...|..|+++ .+++||.|+ +|++.|.....|..|+++|....+
T Consensus         5 ~C~~~~~~C~~C~k~f~-~~~L~~H~~~-~~~~p~~C~~~C~k~f~~~~~L~~H~~~hc~~~~   65 (66)
T 2eod_A            5 SSGKRTQPCTYCTKEFV-FDTIQSHQYQ-CPRLPVACPNQCGVGTVAREDLPGHLKDSCNTAL   65 (66)
T ss_dssp             CCCCCEEECSSSCCEEE-HHHHHHHHHH-CSSSEEECTTCCSCCEEETTTHHHHHHTTSSSCC
T ss_pred             cCCCCCeeccccCCccC-HHHHHHHHHH-cCCcCccCCcccCcccccHHHHHHHHHhhcccCc
Confidence            45677899999999999 9999999999 999999999 999999999999999999877654

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=5e-13  Score=69.62  Aligned_cols=45  Identities=36%  Similarity=0.673  Sum_probs=39.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            2 SSGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            477788888999999999999999999999999999999999887

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.32  E-value=1.2e-12  Score=68.44  Aligned_cols=45  Identities=40%  Similarity=0.602  Sum_probs=40.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHH-HhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLR-IHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~C  169 (189)
                      .|++.|.+++||.|++|++.|.....|..|++ +|++++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            47788889999999999999999999999999 9999999999887

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.30  E-value=1.7e-12  Score=67.54  Aligned_cols=45  Identities=40%  Similarity=0.679  Sum_probs=40.4

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .|++.|.++++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            2 SSGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477888899999999999999999999999999999999999875

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.27  E-value=1.6e-13  Score=76.37  Aligned_cols=55  Identities=16%  Similarity=0.400  Sum_probs=46.0

Q ss_pred             HHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHH
Q psy9067         123 MRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLK  180 (189)
Q Consensus       123 l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~  180 (189)
                      |..|++.|.+++||.|++|++.|.....|.   ++|+++++|.|+.||+.|....++.
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~~   56 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESAM   56 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTCS
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCcccc
Confidence            346788888999999999999999887776   7889999999999999998766543

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.26  E-value=3.7e-12  Score=66.24  Aligned_cols=44  Identities=41%  Similarity=0.648  Sum_probs=39.7

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788889999999999999999999999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.25  E-value=3.6e-12  Score=66.29  Aligned_cols=44  Identities=41%  Similarity=0.579  Sum_probs=39.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47788889999999999999999999999999999999999974

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.4e-12  Score=65.95  Aligned_cols=44  Identities=39%  Similarity=0.641  Sum_probs=39.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788889999999999999999999999999999999999874

>2ej4_A Zinc finger protein ZIC 3; ZF-C2H2 domain, zinc binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.25  E-value=5.6e-12  Score=76.10  Aligned_cols=61  Identities=25%  Similarity=0.309  Sum_probs=44.5

Q ss_pred             EeeeCCCcceeeechhHHHHHHhh-CCCCCc--------ccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067           6 YYWSDTTGYLRYHVMYLLARHLKS-HSEERP--------HKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus         6 ~~~c~~c~~~~f~~~~~l~~h~~~-~~~~~~--------~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      .|.|..|+ ..|.....|..|++. |.++++        |.|+.|++.|.....|..|++.|+++++|.|.
T Consensus        25 ~~~C~~C~-k~f~~~~~L~~H~~~~H~~~~~~~~~~c~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   94 (95)
T 2ej4_A           25 SRPKKSCD-RTFSTMHELVTHVTMEHVGGPEQNNHVCYWEECPREGKSFKAKYKLVNHIRVHTGEKSGPSS   94 (95)
T ss_dssp             SSSCCCCC-CCCSSHHHHHHHHHHTTTCCTTCSCCCCCCTTCSSTTCCCSSHHHHHHHHHHHHTCCCCSSC
T ss_pred             CCcccccc-cccCCHHHHHHHHHHhccCCCCCCccceeccCCCCCCcccCCHHHHHHHHHhcCCCCCCCCC
Confidence            35577777 577777777777776 666665        77777777777777777777777777777775

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.7e-12  Score=65.83  Aligned_cols=44  Identities=41%  Similarity=0.637  Sum_probs=38.8

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            47778888999999999999999999999999999999999874

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=5.9e-12  Score=65.45  Aligned_cols=44  Identities=39%  Similarity=0.634  Sum_probs=39.2

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.++++|.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788888999999999999999999999999999999999874

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=6.8e-12  Score=63.86  Aligned_cols=42  Identities=29%  Similarity=0.555  Sum_probs=37.0

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      |+++|.+++||.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            567788889999999999999999999999999999999884

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.3e-12  Score=65.99  Aligned_cols=44  Identities=36%  Similarity=0.551  Sum_probs=39.4

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788889999999999999999999999999999999999874

>2ytn_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4e-12  Score=66.11  Aligned_cols=45  Identities=29%  Similarity=0.434  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytn_A            2 SSGSSGTGKKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSSCBCTTTCCBCSSHHHHHHHGGGTSCCCCCSCCCC
T ss_pred             CCCcCCCCCcCeECCCCCCeeCCHHHHHHHhhhcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=4.7e-12  Score=65.84  Aligned_cols=44  Identities=43%  Similarity=0.669  Sum_probs=40.1

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47788899999999999999999999999999999999999975

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.25  E-value=4.8e-12  Score=65.50  Aligned_cols=42  Identities=24%  Similarity=0.468  Sum_probs=34.0

Q ss_pred             hcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccch
Q psy9067         129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICH  170 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  170 (189)
                      .|.+++||.|++|++.|.....|..|+++|+++++|.|++||
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            4 GSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            466778888888888888888888888888888888888876

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.25  E-value=6.8e-12  Score=65.22  Aligned_cols=44  Identities=32%  Similarity=0.537  Sum_probs=39.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47788889999999999999999999999999999999999974

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.24  E-value=4.7e-12  Score=64.50  Aligned_cols=42  Identities=31%  Similarity=0.531  Sum_probs=35.7

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      |++.|.+++||.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            566778888888888888888888888888888888888885

>2em0_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens}

Probab=99.24  E-value=4.3e-12  Score=66.01  Aligned_cols=45  Identities=31%  Similarity=0.415  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em0_A            2 SSGSSGMGEKTWKCRECDMCFSQASSLRLHQNVHVGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCCCCCSSSCCCCSSHHHHHHHGGGGSSSSCSCSSCC
T ss_pred             CCcCccCCCcCeECCCCCcccCCHHHHHHHHHHcCCCCCcCCCCC
Confidence            467889999999999999999999999999999999999999987

>2eq4_A Zinc finger protein 224; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.2e-12  Score=66.00  Aligned_cols=45  Identities=24%  Similarity=0.369  Sum_probs=42.5

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eq4_A            2 SSGSSGTGEKLYNCKECGKSFSRAPCLLKHERLHSGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCCCCCBTTTTBCCSCHHHHHHHHHHCCSSSCCCCCCC
T ss_pred             CCcccCCCCCCeECCCCCCccCchHHHHHHHHhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.1e-12  Score=65.71  Aligned_cols=44  Identities=41%  Similarity=0.647  Sum_probs=38.6

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            47778888899999999999999999999999999999998864

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.1e-12  Score=65.69  Aligned_cols=44  Identities=48%  Similarity=0.718  Sum_probs=38.2

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47778888899999999999999999999999999999998864

>2emx_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.24  E-value=3.5e-12  Score=65.67  Aligned_cols=44  Identities=32%  Similarity=0.475  Sum_probs=41.5

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   44 (44)
T 2emx_A            1 GSSGSSGEKPFGCSCCEKAFSSKSYLLVHQQTHAEEKPSGPSSG   44 (44)
T ss_dssp             CCCCCSSCCCEECSSSSCEESSHHHHHHHHHHHTSSCSCSCCCC
T ss_pred             CCCCcCCCcCccCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            56788999999999999999999999999999999999999987

>2epz_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.8e-12  Score=65.80  Aligned_cols=45  Identities=29%  Similarity=0.451  Sum_probs=42.3

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epz_A            2 SSGSSGTGEKPFDCIDCGKAFSDHIGLNQHRRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCCCSBCCTTTCCCBSSHHHHHHHHTTTTTCCCCSSCCC
T ss_pred             CCCCCcCCCCCeECCCCCceeCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.4e-12  Score=65.62  Aligned_cols=44  Identities=34%  Similarity=0.555  Sum_probs=38.7

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888899999999999999999999999999999999874

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=3.7e-12  Score=66.27  Aligned_cols=44  Identities=43%  Similarity=0.598  Sum_probs=38.2

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888899999999999999999999999999999998874

>2ene_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.1e-12  Score=66.08  Aligned_cols=45  Identities=31%  Similarity=0.462  Sum_probs=42.5

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ene_A            2 SSGSSGTGEKPYKCNECGKVFRHNSYLSRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSCCCSSSEECSSSCCEESSHHHHHHHHTTTCCCCCCSCCCC
T ss_pred             CcccCCCCCCCeECCCCCchhCChHHHHHHHhhcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=5.5e-12  Score=65.58  Aligned_cols=44  Identities=34%  Similarity=0.552  Sum_probs=38.9

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47778888999999999999999999999999999999999874

>2eml_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.5e-12  Score=65.93  Aligned_cols=45  Identities=33%  Similarity=0.504  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eml_A            2 SSGSSGTGEKPYECSVCGKAFSHRQSLSVHQRIHSGKKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHGGGSSCCCSCSSCC
T ss_pred             CccCCcCCCCCeeCCCcCCccCCHHHHHHHHHHhcCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=6e-12  Score=65.44  Aligned_cols=44  Identities=36%  Similarity=0.637  Sum_probs=38.4

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            47778888899999999999999999999999999999998864

>2ely_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ena_A 2en4_A

Probab=99.24  E-value=4.2e-12  Score=66.06  Aligned_cols=44  Identities=34%  Similarity=0.538  Sum_probs=42.0

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ely_A            3 SGSSGTGEKPFKCVECGKGFSRRSALNVHHKLHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSBCCSSSCCCBSSTTHHHHHHHHHSCCSSCSCCCC
T ss_pred             CCCCCCCCCCcccCccCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2emm_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.3e-12  Score=65.99  Aligned_cols=45  Identities=38%  Similarity=0.548  Sum_probs=42.5

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emm_A            2 SSGSSGTGERPHKCNECGKSFIQSAHLIQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESSHHHHHHHHHHHSCCCTTSSSCC
T ss_pred             CCcCCcCCCCCeeCCCCChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2emf_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.24  E-value=4.1e-12  Score=66.09  Aligned_cols=44  Identities=25%  Similarity=0.406  Sum_probs=41.9

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emf_A            3 SGSSGTGGKHFECTECGKAFTRKSTLSMHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSSSSSCCEECSSSCCEESCHHHHHHHGGGTSCSSCSCCCCC
T ss_pred             cccccCCCCCeECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2el4_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eog_A 2em1_A 2emw_A 2eok_A

Probab=99.24  E-value=4.6e-12  Score=65.88  Aligned_cols=45  Identities=31%  Similarity=0.439  Sum_probs=42.5

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2el4_A            2 SSGSSGTGVKPYGCSQCAKTFSLKSQLIVHQRSHTGVKPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSSCEESSHHHHHHHGGGSSSCCCSCCTTC
T ss_pred             ccccCCCCCCceECCCCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.5e-12  Score=65.58  Aligned_cols=43  Identities=35%  Similarity=0.616  Sum_probs=37.0

Q ss_pred             hhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         127 MRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       127 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      ++.|.++++|.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4567788889999999999999999999988988899998887

>2ytq_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.5e-12  Score=65.60  Aligned_cols=44  Identities=32%  Similarity=0.486  Sum_probs=41.9

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytq_A            3 SGSSGAGEKPYGCSECGKAFSSKSYLIIHMRTHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCSSCCCSCBCSSSCCBCSCHHHHHHHHTTTCCSCSSCCCCC
T ss_pred             CCcCcCCCCCcCCCccChhhCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2eoq_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.4e-12  Score=65.62  Aligned_cols=45  Identities=29%  Similarity=0.453  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoq_A            2 SSGSSGTGEKPFKCDICGKSFCGRSRLNRHSMVHTAEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSCCCSSSCCCCSSHHHHHHHHHHTTCCCSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCcCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2emk_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2ysv_A

Probab=99.23  E-value=4.9e-12  Score=65.79  Aligned_cols=45  Identities=29%  Similarity=0.469  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emk_A            2 SSGSSGTGEKPYECKECGKAFSQTTHLIQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSSCSCBCSSSCCBCSCHHHHHHHHHHHSSCCCSSCCCC
T ss_pred             CCCCccCCCCceECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2eop_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.3e-12  Score=65.63  Aligned_cols=45  Identities=29%  Similarity=0.457  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eop_A            2 SSGSSGTGEKPHECRECGKSFSFNSQLIVHQRIHTGENPSGPSSG   46 (46)
T ss_dssp             CCCCSCCCCCSCBCTTTCCBCSSHHHHHHHHTTTTTSCCSCCCCC
T ss_pred             CCccccCCCCCeeCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2eps_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.23  E-value=1.4e-11  Score=66.39  Aligned_cols=47  Identities=36%  Similarity=0.657  Sum_probs=43.4

Q ss_pred             hCCCCCcccCCCCCccccchhhHHHHHh-hcCCCCCcccccCcccCCC
Q psy9067          29 SHSEERPHKCSVCERGFKTIASLQNHIN-THTGVKPHKCKYCESRFTT   75 (189)
Q Consensus        29 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~~C~~C~~~f~~   75 (189)
                      .+.++++|.|+.|++.|.....|..|++ .|.++++|.|..|++.|.+
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~k~~~C~~C~k~F~~   53 (54)
T 2eps_A            6 SGSVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQVWVSGPSS   53 (54)
T ss_dssp             CCCSSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSSSCCSSCC
T ss_pred             CCCCCCCeECCCCCcccCCHHHHHHHHHHhcCCCCCccCCCCCCCCCC
Confidence            4677899999999999999999999997 8999999999999999975

>2eme_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6.1e-12  Score=65.39  Aligned_cols=45  Identities=33%  Similarity=0.446  Sum_probs=42.5

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eme_A            2 SSGSSGSGEKPYVCDYCGKAFGLSAELVRHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCTTCCCCSEECSSSCCEESSHHHHHHHHGGGCCCSCCSSCCC
T ss_pred             CCCCCCCCCCCeECCCCChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2ep2_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.6e-12  Score=65.56  Aligned_cols=45  Identities=31%  Similarity=0.517  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|+..|.+++||.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ep2_A            2 SSGSSGTGEKPYECSICGKSFTKKSQLHVHQQIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSSCSSCCCSEECSSSCCEESSHHHHHHHHHTTSSCCSCCSCCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2emy_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=4.6e-12  Score=65.88  Aligned_cols=45  Identities=29%  Similarity=0.425  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emy_A            2 SSGSSGTGENPYECHECGKAFSRKYQLISHQRTHAGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCSSCCEECSSSCCEESSHHHHHHHHHHHTTSCCSCSSCC
T ss_pred             CCCCCCCCCcCcCCCCCCcccCcHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2ytj_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=6.2e-12  Score=65.36  Aligned_cols=45  Identities=27%  Similarity=0.392  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ytj_A            2 SSGSSGTGEKPYICAECGKAFTIRSNLIKHQKIHTKQKPSGPSSG   46 (46)
T ss_dssp             CSSCTTSSCCSEECSSSCCEESSHHHHHHHHHHTSCCCCSSCSCC
T ss_pred             CcccCCCCCcCeECCCCChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999986

>2em7_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=5.4e-12  Score=65.60  Aligned_cols=44  Identities=34%  Similarity=0.484  Sum_probs=41.8

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2em7_A            3 SGSSGTGEKPYKCEECGKGFICRRDLYTHHMVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSCCCSEECSSSCCEESCHHHHHHHGGGGTTCCCSSTTCC
T ss_pred             CCCCCCCCcCccCCCccchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999987

>2ema_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2emc_A

Probab=99.23  E-value=4.8e-12  Score=65.82  Aligned_cols=45  Identities=29%  Similarity=0.403  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2ema_A            2 SSGSSGTGEKRYKCNECGKVFSRNSQLSQHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSCSSCTTSCCEECSSSCCEESSHHHHHHHHTGGGCCCCCSSSCC
T ss_pred             CCccCCCCCcCcCCCCCcchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2elz_A Zinc finger protein 224; DNA-binding, metal-binding, nuclear protein, phosphorylation, polymorphism, repeat, repressor, transcription; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.4e-12  Score=65.62  Aligned_cols=44  Identities=30%  Similarity=0.422  Sum_probs=41.8

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2elz_A            3 SGSSGSVEKPYKCEDCGKGYNRRLNLDMHQRVHMGEKTSGPSSG   46 (46)
T ss_dssp             CCSCCCCCSSCBCSSSCCBCSSHHHHHHHGGGGGSCCCCCSCCC
T ss_pred             CCCCCCCCCCeeCcccCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999987

>2em5_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.23  E-value=4.9e-12  Score=65.80  Aligned_cols=45  Identities=33%  Similarity=0.519  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em5_A            2 SSGSSGSSTKSHQCHECGRGFTLKSHLNQHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCSEECSSSCCEESSHHHHHHHHTTTSCSCCSSCCCC
T ss_pred             CCcCCCCCCCCeECCcCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2eq0_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.1e-12  Score=65.72  Aligned_cols=45  Identities=31%  Similarity=0.440  Sum_probs=42.2

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2eq0_A            2 SSGSSGTGEKPYKCHECGKVFRRNSHLARHQLIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCTTCCCCEECTTTCCEESSHHHHHHHHTTTCCCCCSCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2ytr_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.23  E-value=5.6e-12  Score=65.53  Aligned_cols=45  Identities=31%  Similarity=0.501  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytr_A            2 SSGSSGTGEKPYKCNECGKAFSQTSKLARHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCSSCCTTCCTTTCCCCSSHHHHHHHHTTTTTCSCCCSCCC
T ss_pred             CCCcCCCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2eov_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.7e-12  Score=65.49  Aligned_cols=45  Identities=29%  Similarity=0.389  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eov_A            2 SSGSSGTGEKPYKCSDCGKSFTWKSRLRIHQKCHTGERHSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSCBCSSSCCBCSSHHHHHHHHHHHSCCSSCCSCCC
T ss_pred             CCCCCCCCCCCccCCccChhhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=9.4e-12  Score=64.69  Aligned_cols=44  Identities=30%  Similarity=0.550  Sum_probs=39.0

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eoh_A            2 SSGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPSS   45 (46)
T ss_dssp             CCCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTTC
T ss_pred             CCCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            37778888999999999999999999999999999999999863

>2eoe_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=4.7e-12  Score=65.81  Aligned_cols=45  Identities=36%  Similarity=0.519  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2eoe_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLANHQRIHTGVKPSGPSSG   46 (46)
T ss_dssp             CCSSCCCCCCSSEETTTTEECSSHHHHHHHHGGGSCCCSCSSCCC
T ss_pred             CCCCCCCCCCCeECCCcChhhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.6e-12  Score=65.26  Aligned_cols=44  Identities=41%  Similarity=0.607  Sum_probs=38.6

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888899999999999999999999999999999999864

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=6.2e-12  Score=65.37  Aligned_cols=44  Identities=41%  Similarity=0.582  Sum_probs=38.2

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.++++|.|++|++.|...+.|..|+++|+++++|.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            47778888899999999999999999999999999999998864

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.3e-12  Score=65.64  Aligned_cols=43  Identities=42%  Similarity=0.585  Sum_probs=33.8

Q ss_pred             hhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         127 MRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       127 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      .+.|.+++||.|++|++.|.....|..|+++|+++++|.|++|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            4566777888888888888888888888888888888888776

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.3e-12  Score=65.64  Aligned_cols=44  Identities=39%  Similarity=0.598  Sum_probs=38.3

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888899999999999999999999999999999998874

>2em9_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2yrh_A

Probab=99.22  E-value=6.3e-12  Score=65.32  Aligned_cols=45  Identities=27%  Similarity=0.459  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em9_A            2 SSGSSGTGEKPYNCKECGKSFRWASCLLKHQRVHSGEKPSGPSSG   46 (46)
T ss_dssp             CSCCSCCCCCSEECSSSCCEESSHHHHHHHGGGGTSCCCCSTTCC
T ss_pred             CCCCCCCCCcCeECCccccccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2ytd_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.9e-12  Score=65.47  Aligned_cols=45  Identities=33%  Similarity=0.510  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytd_A            2 SSGSSGSGEKPYKCSECGKAFHRHTHLNEHRRIHTGYRPSGPSSG   46 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSHHHHHHHHHHHTCCCSSCSSCC
T ss_pred             CCccccCCCcCeECCCCCCeeCChHHHHHHHHHcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=7.9e-12  Score=64.97  Aligned_cols=44  Identities=32%  Similarity=0.529  Sum_probs=40.3

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788999999999999999999999999999999999999974

>2epw_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=5.9e-12  Score=65.45  Aligned_cols=45  Identities=27%  Similarity=0.308  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2epw_A            2 SSGSSGTGEKPCKCTECGKAFCWKSQLIMHQRTHVDDKHSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSSHHHHHHHHHCCSCCCSCCCCC
T ss_pred             cCcccCCCCCCeeCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2enc_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.22  E-value=7.1e-12  Score=65.15  Aligned_cols=44  Identities=34%  Similarity=0.522  Sum_probs=41.8

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2enc_A            3 SGSSGSGEKPFKCEECGKGFYTNSQCYSHQRSHSGEKPSGPSSG   46 (46)
T ss_dssp             CSSCCCCCCSEECSSSCCEESSHHHHHHHHHHSCCSSCCSSCCC
T ss_pred             CCCCCCCCCCcCCCCCCCcCCChHHHHHHHHHhCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999987

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.22  E-value=7.4e-12  Score=65.11  Aligned_cols=43  Identities=35%  Similarity=0.581  Sum_probs=36.0

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      |++.|.+++||.|++|++.|.....|..|+++|+++++|.|++
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            5677888888888888888888888888888888888888864

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=7.6e-12  Score=64.34  Aligned_cols=43  Identities=35%  Similarity=0.462  Sum_probs=38.1

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4778888899999999999999999999999999999999885

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=8.2e-12  Score=64.22  Aligned_cols=43  Identities=37%  Similarity=0.563  Sum_probs=38.6

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      .|++.|.+++||.|++|++.|...+.|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4778888999999999999999999999999999999999885

>2ytk_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.6e-12  Score=65.53  Aligned_cols=45  Identities=36%  Similarity=0.488  Sum_probs=42.3

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~c   46 (46)
T 2ytk_A            2 SSGSSGSGEKPYKCNECGKVFTQNSHLTNHWRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCSSSSCSEECSSSCCEESSHHHHHHHHHHHSSSSCSSCCCC
T ss_pred             CCcccCCCCCCEeCCcCCCccCCHHHHHHHHHHHCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=5.6e-12  Score=65.52  Aligned_cols=44  Identities=43%  Similarity=0.658  Sum_probs=36.9

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|+++|.+++||.|++|++.|...+.|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            46777888888888888888888888888888888888888864

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=7.3e-12  Score=64.46  Aligned_cols=43  Identities=23%  Similarity=0.416  Sum_probs=38.4

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4778888999999999999999999999999999999999885

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=8.6e-12  Score=64.82  Aligned_cols=43  Identities=35%  Similarity=0.540  Sum_probs=39.0

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4778888999999999999999999999999999999999986

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.21  E-value=4.4e-12  Score=66.61  Aligned_cols=40  Identities=30%  Similarity=0.568  Sum_probs=22.4

Q ss_pred             CCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccch
Q psy9067         131 TGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICH  170 (189)
Q Consensus       131 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~  170 (189)
                      .++++|.|.+|++.|.....|..|+++|+++++|.|++|+
T Consensus         8 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~   47 (48)
T 2epr_A            8 RTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSS   47 (48)
T ss_dssp             CCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCC
T ss_pred             CCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCC
Confidence            3445555555555555555555555555555555555555

>2en1_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.9e-12  Score=65.19  Aligned_cols=45  Identities=33%  Similarity=0.509  Sum_probs=42.5

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2en1_A            2 SSGSSGSGEKPFKCEECGKRFTQNSQLHSHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CSTTCCCCCCSEEETTTTEEESSHHHHHHHGGGGSCCCCSCCCCC
T ss_pred             CcccCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=6.3e-12  Score=65.34  Aligned_cols=44  Identities=43%  Similarity=0.702  Sum_probs=37.8

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            47778888889999999999999999999988888888888864

>2eoo_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.3e-12  Score=66.01  Aligned_cols=45  Identities=27%  Similarity=0.353  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2eoo_A            2 SSGSSGSGERPYGCNECGKNFGRHSHLIEHLKRHFREKSSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCCCEECSSSCCEESSHHHHHHHHHHHHSTTSSCCSCC
T ss_pred             CCCCCCCCCCCEEccccCcccCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            477889999999999999999999999999999999999999987

>2en8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.21  E-value=6.6e-12  Score=65.26  Aligned_cols=45  Identities=29%  Similarity=0.385  Sum_probs=42.3

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en8_A            2 SSGSSGSGEKSHTCDECGKNFCYISALRIHQRVHMGEKCSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECTTTCCEESSHHHHHHHHTTTCCSCSSCCSCC
T ss_pred             CccccCCCCCCeECCCcCcccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2el6_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens}

Probab=99.21  E-value=9e-12  Score=64.76  Aligned_cols=44  Identities=32%  Similarity=0.370  Sum_probs=41.8

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2el6_A            3 SGSSGAGVNPYKCSQCEKSFSGKLRLLVHQRMHTREKPSGPSSG   46 (46)
T ss_dssp             SCCSSCCCCSEECSSSSCEESSHHHHHHHHGGGCCSSCCSCCCC
T ss_pred             CCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            57789999999999999999999999999999999999999987

>2emp_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.21  E-value=4.8e-12  Score=65.82  Aligned_cols=45  Identities=29%  Similarity=0.425  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2emp_A            2 SSGSSGTGVKPYMCNECGKAFSVYSSLTTHQVIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCSSCCCSEECSSSCCEESCHHHHHHHHHHHHCCSCCSCCCC
T ss_pred             CcccccCCCcCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=7.1e-12  Score=65.16  Aligned_cols=44  Identities=36%  Similarity=0.509  Sum_probs=39.2

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47788889999999999999999999999999999999999863

>2emh_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=4.7e-12  Score=65.86  Aligned_cols=45  Identities=33%  Similarity=0.507  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~c   46 (46)
T 2emh_A            2 SSGSSGTGERPYICTVCGKAFTDRSNLIKHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCSCSCCCSEECTTTCCEESSHHHHHHHHHHHHCSSCSSSCCC
T ss_pred             CCCCCCCCCCCcCCCCCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.20  E-value=4.1e-12  Score=68.47  Aligned_cols=50  Identities=20%  Similarity=0.289  Sum_probs=36.8

Q ss_pred             ccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcc
Q psy9067         115 YASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPY  164 (189)
Q Consensus       115 ~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~  164 (189)
                      +.|.....|..|++.|.+++||.|++|++.|...+.|..|+++|++++||
T Consensus         4 k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   53 (54)
T 1yui_A            4 KRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHFAKPG   53 (54)
T ss_dssp             CCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTTTSCC
T ss_pred             cccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhccCCCC
Confidence            45666666777777777777777777777777777777777777777765

>2yso_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.20  E-value=7.7e-12  Score=65.01  Aligned_cols=44  Identities=30%  Similarity=0.324  Sum_probs=41.8

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         3 H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2yso_A            3 SGSSGSREKSHQCRECGEIFFQYVSLIEHQVLHMGQKNSGPSSG   46 (46)
T ss_dssp             CSCCSSCCCCEECTTTCCEESSHHHHHHHHHHHSCCSCCCTTCC
T ss_pred             cccccCCCCCEEccccChhhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2ysp_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.5e-12  Score=65.56  Aligned_cols=44  Identities=30%  Similarity=0.521  Sum_probs=41.8

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 H~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ysp_A            3 SGSSGTGEKPYKCEKCGKGYNSKFNLDMHQKVHTGERPSGPSSG   46 (46)
T ss_dssp             CCCCCSSCCSEEETTTTEEESCHHHHHHHHTTSCSCCSSCCSCC
T ss_pred             CCcCCCCCCCeECCCCCCccCCHHHHHHHHHhhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999987

>2ytm_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.20  E-value=5.8e-12  Score=65.52  Aligned_cols=44  Identities=30%  Similarity=0.443  Sum_probs=41.7

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2ytm_A            3 SGSSGTGEKPYKCMECGKAFGDNSSCTQHQRLHTGQRPSGPSSG   46 (46)
T ss_dssp             SCCCCSSCCSSSBTTTTBCCSSHHHHHHHHHHHHSCCCCCCCCC
T ss_pred             CCcCCCCCCCcCCCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            67789999999999999999999999999999999999999987

>2epa_A Krueppel-like factor 10; transforming growth factor-beta-inducible early growth response protein 1, TGFB-inducible early growth response protein 1; NMR {Homo sapiens}

Probab=99.19  E-value=1.2e-11  Score=70.74  Aligned_cols=58  Identities=33%  Similarity=0.681  Sum_probs=52.8

Q ss_pred             ccCCCCCccCCC--CCccccchHHHHhchhhcCCCCCccCcc--CCccCCChHHHHHHHHHh
Q psy9067         101 KHTHEKPHKCSI--CDYASVELSKMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIH  158 (189)
Q Consensus       101 ~~~~~~~~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h  158 (189)
                      .....++|.|+.  |++.|.....|..|++.|.+++||.|++  |++.|.....|..|+++|
T Consensus        11 ~~~~~~~~~C~~~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~~C~k~f~~~~~l~~H~~~H   72 (72)
T 2epa_A           11 DSSRIRSHICSHPGCGKTYFKSSHLKAHTRTHTGEKPFSCSWKGCERRFARSDELSRHRRTH   72 (72)
T ss_dssp             CCCCCCCEECSSTTTCCEESSHHHHHHHHHHHSSSCSEECCCTTCCCEESSHHHHHHHTTTC
T ss_pred             CccccCceeCCCCCCccccCCHHHHHHHHHhcCCCCCccCCCCCCCcccCCHHHHHhHhhcC
Confidence            356678899998  9999999999999999999999999965  999999999999998765

>2en6_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=6.4e-12  Score=65.33  Aligned_cols=45  Identities=33%  Similarity=0.459  Sum_probs=42.3

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~h~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2en6_A            2 SSGSSGSGEKPYGCNECGKTFSQKSILSAHQRTHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSCCCCSSCCEEETTTTEEESSHHHHHHHHHHHSSCCCSSSCCC
T ss_pred             CCCCccCCCcCeECCCCCcccCchHHHHHHHHHcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2epx_A Zinc finger protein 28 homolog; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=1.2e-11  Score=64.59  Aligned_cols=45  Identities=29%  Similarity=0.406  Sum_probs=42.1

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHh-hcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHIN-THTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~-~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++ .|.++++|.|..|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~~H~~~k~~~C~~C   47 (47)
T 2epx_A            2 SSGSSGTGKKPYECIECGKAFIQNTSLIRHWRYYHTGEKPSGPSSG   47 (47)
T ss_dssp             CCCCCCCCCCSBCCSSSCCCBSSHHHHHHHHTTTTTTSCSSSCCCC
T ss_pred             ccccccCCCCCEECCccCchhCChHHHHHHhHhhcCCCCCCCCCCC
Confidence            36788999999999999999999999999999 9999999999987

>2yu8_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.8e-12  Score=65.80  Aligned_cols=45  Identities=31%  Similarity=0.445  Sum_probs=42.3

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2yu8_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRRVHTGGKPSGPSSG   46 (46)
T ss_dssp             CCCCCCCCCSSEECSSSCCEESSSHHHHHHTHHHHSCCCSCSCCC
T ss_pred             CcCcCCCCCCCeECCcCCchhCCHHHHHHHHHhcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999999999987

>2ytg_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.19  E-value=4.8e-12  Score=65.82  Aligned_cols=45  Identities=29%  Similarity=0.489  Sum_probs=42.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      .|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|+.|
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytg_A            2 SSGSSGTGEKPFKCGECGKSYNQRVHLTQHQRVHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCCCCSSCCSEECTTTCCEESSSHHHHTTGGGGSSCCSSCSCCC
T ss_pred             CCCCCCCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999987

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=7.3e-12  Score=63.73  Aligned_cols=41  Identities=37%  Similarity=0.652  Sum_probs=32.3

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccC
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC  166 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  166 (189)
                      |++.|.+++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            66677777888888888888888888888888888777776

>2ep3_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=1.1e-11  Score=64.41  Aligned_cols=45  Identities=29%  Similarity=0.479  Sum_probs=41.9

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|++|
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~~   46 (46)
T 2ep3_A            2 SSGSSGTGEKPYRCAECGKAFTDRSNLFTHQKIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSSSSCCCSEECSSSCCEESSHHHHHHHHTTTTTSCCCCTTCC
T ss_pred             CCCCCCCCCCCeECCCCCchhCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467889999999999999999999999999999999999999875

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.4e-12  Score=64.19  Aligned_cols=43  Identities=28%  Similarity=0.498  Sum_probs=37.1

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      .|+++|.+++||.|++|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            4777888888999999999999999999998888888888884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=1.1e-11  Score=63.72  Aligned_cols=43  Identities=16%  Similarity=0.277  Sum_probs=37.4

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4777888888999999999999999999999999888888884

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=2.4e-11  Score=62.47  Aligned_cols=42  Identities=19%  Similarity=0.270  Sum_probs=37.3

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      |++.|.+++||.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            667788889999999999999999999999999999999884

>2em8_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.18  E-value=8.3e-12  Score=64.90  Aligned_cols=44  Identities=34%  Similarity=0.443  Sum_probs=41.6

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         3 h~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~C   46 (46)
T 2em8_A            3 SGSSGSGEKPYKCVECGKGYKRRLDLDFHQRVHTGEKLSGPSSG   46 (46)
T ss_dssp             CCCCCCSCCSEECSSSCCEESSHHHHHHHHHHHHCCCCCCSCCC
T ss_pred             CCCCCCCCCCeECcccCchhCCHHHHHHHHHHHcCCCCCCCCCC
Confidence            56789999999999999999999999999999999999999987

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.18  E-value=9e-12  Score=64.76  Aligned_cols=44  Identities=25%  Similarity=0.288  Sum_probs=37.4

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhC-CCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTG-EKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~-~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|++ +++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            467788888889999999999998999999888888 88888864

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.1e-11  Score=64.45  Aligned_cols=43  Identities=33%  Similarity=0.531  Sum_probs=39.6

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            5788889999999999999999999999999999999999986

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.17  E-value=1.3e-11  Score=62.77  Aligned_cols=41  Identities=41%  Similarity=0.661  Sum_probs=32.9

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccC
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC  166 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  166 (189)
                      |++.|.+++||.|++|++.|...+.|..|+++|+++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56677778888888888888888888888888888888776

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.17  E-value=1.8e-11  Score=62.19  Aligned_cols=41  Identities=27%  Similarity=0.404  Sum_probs=34.7

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccC
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC  166 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  166 (189)
                      |++.|.+++||.|++|++.|...+.|..|+++|++++||.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56677888888888888888888888888888888888877

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.17  E-value=1.3e-11  Score=62.73  Aligned_cols=41  Identities=34%  Similarity=0.620  Sum_probs=36.0

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccC
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC  166 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  166 (189)
                      |++.|.+++||.|++|++.|.....|..|+++|++++||.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            66778888899999999999999999999999999888887

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.3e-11  Score=64.14  Aligned_cols=44  Identities=39%  Similarity=0.593  Sum_probs=38.0

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|++.|.+++||.|++|++.|.....|..|+++|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            47778888899999999999999999999999999999998863

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.8e-11  Score=63.55  Aligned_cols=42  Identities=40%  Similarity=0.699  Sum_probs=35.5

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      |++.|.+++||.|++|++.|.....|..|+++|+++++|.|+
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPS   44 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            566778888888888888888888888888888888888886

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.16  E-value=2.4e-12  Score=74.24  Aligned_cols=64  Identities=23%  Similarity=0.354  Sum_probs=56.7

Q ss_pred             HHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         122 KMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       122 ~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .|..|+..+.+++|+.|+.|++.|. ...|..|. .+.+++++.|+.|++.|. +..|..|++++++
T Consensus         4 ~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~c~~   67 (75)
T 2d9k_A            4 GSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEVCGR   67 (75)
T ss_dssp             CCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHHBTT
T ss_pred             HHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHHccC
Confidence            4667888899999999999999995 88999999 899999999999999887 5889999988764

>2em2_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.16  E-value=1.9e-11  Score=63.53  Aligned_cols=44  Identities=34%  Similarity=0.555  Sum_probs=41.4

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|++|
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~~   46 (46)
T 2em2_A            3 SGSSGSGEKPFKCKECGKAFRQNIHLASHLRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCCSCCCCCSEECSSSCCEESSHHHHHHHHHHHCCCCSSCSSCC
T ss_pred             CCCCCCCCCCEECCcCCchhCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            67889999999999999999999999999999999999999875

>1yui_A GAGA-factor; complex (DNA-binding protein/DNA), chromatin remodeling, DNA binding protein/DNA complex; HET: DNA; NMR {Drosophila melanogaster} SCOP: g.37.1.1 PDB: 1yuj_A*

Probab=99.15  E-value=5.3e-12  Score=68.03  Aligned_cols=47  Identities=21%  Similarity=0.287  Sum_probs=43.5

Q ss_pred             CccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         142 TYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       142 ~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ++.|.....|..|+++|+++++|.|++||+.|...+.|..|+++|++
T Consensus         3 ~k~~~~~~~l~~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~   49 (54)
T 1yui_A            3 AKRAKHPPGTEKPRSRSQSEQPATCPICYAVIRQSRNLRRHLELRHF   49 (54)
T ss_dssp             CCCCSCSSCCCCCHHHHTSSCCEECTTTCCEESSHHHHHHHHHHHTT
T ss_pred             ccccCCCcchhhHHHhcCCCCCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            46778888889999999999999999999999999999999999986

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.14  E-value=1.2e-11  Score=63.58  Aligned_cols=43  Identities=30%  Similarity=0.495  Sum_probs=37.0

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      .|+++|.+++||.|++|++.|.....|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            4677888888899999999999999999999889888888874

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.13  E-value=5.5e-11  Score=61.70  Aligned_cols=42  Identities=36%  Similarity=0.480  Sum_probs=35.2

Q ss_pred             hhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         127 MRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       127 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      ++.|.+++||.|++|++.|.....|..|+++|++++||.|++
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            456778888888888888888888888888888888888864

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3.5e-11  Score=61.84  Aligned_cols=43  Identities=30%  Similarity=0.400  Sum_probs=36.5

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      .|+++|.+++||.|++|++.|...+.|..|+++|++++||.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            4677888888899999999999888999998888888888774

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=99.12  E-value=7e-11  Score=60.38  Aligned_cols=40  Identities=20%  Similarity=0.351  Sum_probs=32.1

Q ss_pred             hcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      .|.+++||.|++|++.|.....|..|+++|+++++|.|++
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            4 GSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             CCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             CcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            4667788888888888888888888888888888888864

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.12  E-value=3e-11  Score=63.28  Aligned_cols=44  Identities=34%  Similarity=0.573  Sum_probs=35.3

Q ss_pred             chhhcCCCCCccCc--cCCccCCChHHHHHHHHHhhCCCcccCccc
Q psy9067         126 HMRSHTGERPYQCA--HCTYASPDTFKLKRHLRIHTGEKPYACDIC  169 (189)
Q Consensus       126 H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C  169 (189)
                      |.+.|.+++||.|.  +|++.|.....|..|+++|+++++|+|.+|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            45567778888887  788888888888888888888888888876

>2el5_A Zinc finger protein 268; alternative splicing, DNA-binding, metal-binding, nuclear protein, repeat, transcription, transcription regulation; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eol_A 2emv_A 2eqw_A 2en0_A 2epy_A

Probab=99.11  E-value=4.1e-11  Score=60.87  Aligned_cols=42  Identities=29%  Similarity=0.457  Sum_probs=39.0

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2el5_A            1 GSSGSSGENPYECSECGKAFNRKDQLISHQRTHAGESGPSSG   42 (42)
T ss_dssp             CCSSSSSCCSEECSSSCCEESSHHHHHHHHGGGCCCCSCCCC
T ss_pred             CCCCCCCCCCccCCCcChhhCCHHHHHHHHHhcCCCCCCCCC
Confidence            567889999999999999999999999999999999999984

>2epr_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.11  E-value=6.6e-11  Score=61.99  Aligned_cols=43  Identities=23%  Similarity=0.466  Sum_probs=39.6

Q ss_pred             hCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcc
Q psy9067          29 SHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCES   71 (189)
Q Consensus        29 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~   71 (189)
                      .+.++++|.|+.|++.|.....|..|++.|.++++|.|.+|++
T Consensus         6 ~~~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C~k   48 (48)
T 2epr_A            6 SGRTRKQVACEICGKIFRDVYHLNRHKLSHSGEKPYSSGPSSG   48 (48)
T ss_dssp             CCCCCCSEEETTTTEEESSHHHHHHHGGGSCSCCCCCSCCCCC
T ss_pred             CCCCCcCeeCCCCCcccCCHHHHHHHHHhcCCCCCccCCCCCC
Confidence            4667889999999999999999999999999999999999985

>2yte_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=5.1e-11  Score=60.51  Aligned_cols=42  Identities=24%  Similarity=0.351  Sum_probs=38.8

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|.
T Consensus         1 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   42 (42)
T 2yte_A            1 GSSGSSGEKPYSCAECKETFSDNNRLVQHQKMHTVKSGPSSG   42 (42)
T ss_dssp             CCSSSCSCCSCBCTTTCCBCSSHHHHHHHHHHTSCCSSCCCC
T ss_pred             CCcCcCCCCCeECCCCCCccCCHHHHHHHHHHhCCCCCCCCC
Confidence            467889999999999999999999999999999999999884

>2ep0_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=6e-11  Score=61.54  Aligned_cols=43  Identities=37%  Similarity=0.547  Sum_probs=40.5

Q ss_pred             HhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          27 LKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        27 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +++|.++++|.|+.|++.|.....|..|++.|.++++|.|..|
T Consensus         4 ~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ep0_A            4 GSSGTGEKPYKCDVCHKSFRYGSSLTVHQRIHTGEKPSGPSSG   46 (46)
T ss_dssp             CCSSTTCCSEECSSSCCEESSHHHHHHHHTTTSSSCCCSCCCC
T ss_pred             CCCCCCCCCeeCcccCcccCChHHHHHHHHHhCCCCCCCCCCC
Confidence            5678899999999999999999999999999999999999987

>2emj_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1 PDB: 2eoi_A

Probab=99.10  E-value=4e-11  Score=62.22  Aligned_cols=44  Identities=30%  Similarity=0.517  Sum_probs=40.9

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emj_A            2 SSGSSGTGEKPFECAECGKSFSISSQLATHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSEECSSSSCEESSHHHHHHHHHHHTTSCSSSSCC
T ss_pred             CCCCCCCCCCCEECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46788999999999999999999999999999999999999974

>2enf_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.10  E-value=4.8e-11  Score=61.92  Aligned_cols=44  Identities=32%  Similarity=0.467  Sum_probs=40.7

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enf_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLVRHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCSCBCSSSCCBCSSHHHHHHHHTTTTTSSCCCCSC
T ss_pred             CCCcCCCCCcCeECCCCCcccCCHHHHHHHHHhhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2ep1_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.6e-11  Score=61.63  Aligned_cols=44  Identities=30%  Similarity=0.461  Sum_probs=40.9

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ep1_A            2 SSGSSGTGEKPYECSDCGKSFIKKSQLHVHQRIHTGENPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSSCCSSSCCCCSSHHHHHHHHGGGSSSCCCSSSC
T ss_pred             ccccCCCCCCCcCCCCCCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46788999999999999999999999999999999999999974

>2em4_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.09  E-value=4.4e-11  Score=62.09  Aligned_cols=44  Identities=36%  Similarity=0.523  Sum_probs=40.8

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em4_A            2 SSGSSGTGQRPYECIECGKAFKTKSSLICHRRSHTGEKPSGPSS   45 (46)
T ss_dssp             CSCCCCCCSSSEECSSSCCEESSHHHHHHHHHHHSSSSCCCCCC
T ss_pred             CCccccCCCcCcCCCCCCCccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>1vd4_A Transcription initiation factor IIE, alpha subunit; zinc finger; NMR {Homo sapiens} SCOP: g.41.3.1

Probab=99.09  E-value=3.4e-12  Score=70.88  Aligned_cols=54  Identities=15%  Similarity=0.420  Sum_probs=47.3

Q ss_pred             HHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHH
Q psy9067          23 LARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGEL   79 (189)
Q Consensus        23 l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l   79 (189)
                      |..|+++|.++++|.|+.|++.|.....|.   ..|.++++|.|..|++.|....++
T Consensus         2 L~~h~~~H~~~k~~~C~~C~k~F~~~~~l~---~~H~~~k~~~C~~C~k~f~~~~~~   55 (62)
T 1vd4_A            2 IETDERDSTNRASFKCPVCSSTFTDLEANQ---LFDPMTGTFRCTFCHTEVEEDESA   55 (62)
T ss_dssp             CCCCSSSCCSSSEEECSSSCCEEEHHHHHH---HEETTTTEEBCSSSCCBCEECTTC
T ss_pred             hhhHHHHcCCCCCccCCCCCchhccHHHhH---hhcCCCCCEECCCCCCccccCccc
Confidence            346788999999999999999999888876   789999999999999999876654

>2ytp_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5e-11  Score=61.84  Aligned_cols=44  Identities=32%  Similarity=0.434  Sum_probs=40.7

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytp_A            2 SSGSSGTGERHYECSECGKAFARKSTLIMHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCCEECSSSCCEESSHHHHHHHHTTTSCCCCCSSCC
T ss_pred             CcccCcCCCCCeECCcCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2eq2_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.7e-11  Score=61.62  Aligned_cols=44  Identities=27%  Similarity=0.486  Sum_probs=40.7

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq2_A            2 SSGSSGTGGKPYQCNECGKAFSQTSKLARHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSSSSCSSSCCSSCCCCSSHHHHHHHGGGGCCCCCCCCCC
T ss_pred             CcccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2yti_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.2e-11  Score=61.76  Aligned_cols=44  Identities=32%  Similarity=0.477  Sum_probs=40.5

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yti_A            2 SSGSSGTGEKPYKCNECGKVFTQNSHLARHRGIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSCCCTTCCSSSCCCCSSHHHHHHHHTTTSCSCCSSTTC
T ss_pred             CCCcCCCCCcCeECCCCCcccCChhHHHHHhHhcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2emg_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.7e-11  Score=61.63  Aligned_cols=44  Identities=30%  Similarity=0.418  Sum_probs=40.6

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2emg_A            2 SSGSSGTGENPFICSECGKVFTHKTNLIIHQKIHTGERPSGPSS   45 (46)
T ss_dssp             CCCCCCCSCCSCBCTTTCCBCSSHHHHHHHHTTTSCCCCSCSCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2epq_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=99.09  E-value=7.3e-11  Score=60.91  Aligned_cols=43  Identities=26%  Similarity=0.466  Sum_probs=40.3

Q ss_pred             hhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCc
Q psy9067          28 KSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCE   70 (189)
Q Consensus        28 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~   70 (189)
                      ..|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~~~C~~cg   45 (45)
T 2epq_A            3 SGSSGEKPYSCPVCGLRFKRKDRMSYHVRSHDGSVGKSGPSSG   45 (45)
T ss_dssp             CCCSSCCSSEETTTTEECSCHHHHHHHHHHHSCCCCCCCCCCC
T ss_pred             CCcCCCCCCcCCCCCcccCCHHHHHHHHHHccCCCCCCCcCCC
Confidence            3578899999999999999999999999999999999999996

>2em3_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.09  E-value=5.4e-11  Score=61.72  Aligned_cols=44  Identities=36%  Similarity=0.580  Sum_probs=40.9

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2em3_A            2 SSGSSGTGEKPYECKVCSKAFTQKAHLAQHQKTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCSSCCSEECSSSCCEESSHHHHHHHHHHHCCCCCCCSCC
T ss_pred             CCCCCCCCCcCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46788999999999999999999999999999999999999974

>2emi_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.2e-11  Score=61.47  Aligned_cols=44  Identities=30%  Similarity=0.418  Sum_probs=40.6

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emi_A            2 SSGSSGTGERHYECSECGKAFIQKSTLSMHQRIHRGEKPSGPSS   45 (46)
T ss_dssp             CCCCSCSSCCCEECSSSCCEESSHHHHHHHHGGGCSCCCCSCCC
T ss_pred             CCCcccCCCCCCCCCCCCcccCCHHHHHHHHhHhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2eow_A Zinc finger protein 347; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=5.6e-11  Score=61.63  Aligned_cols=44  Identities=34%  Similarity=0.542  Sum_probs=40.8

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eow_A            2 SSGSSGTGEKPYKCNECGKAFRARSSLAIHQATHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCSCCCCCEECTTSCCEESSHHHHHHHHHHHCCCSCSCTTC
T ss_pred             CccCCCCCCCCeeccccCChhcCHHHHHHHHHHcCCCCCCCCCC
Confidence            46788999999999999999999999999999999999999974

>2eq1_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6e-11  Score=61.53  Aligned_cols=44  Identities=32%  Similarity=0.529  Sum_probs=40.7

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq1_A            2 SSGSSGTGEKPYKCNECGKAFRAHSNLTTHQVIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCSCCCCCTTTTCCCSSHHHHHHHHTTTCCSCCSSCCC
T ss_pred             CcccccCCCCCeECCcCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2ytf_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.1e-11  Score=61.49  Aligned_cols=44  Identities=36%  Similarity=0.567  Sum_probs=40.7

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2ytf_A            2 SSGSSGTGEKPFECSECQKAFNTKSNLIVHQRTHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSEECSSSCCEESSHHHHHHHHHTSCSSSSSCCCC
T ss_pred             CCCCCCCCCCCcCCCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2yts_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6e-11  Score=61.50  Aligned_cols=44  Identities=30%  Similarity=0.459  Sum_probs=40.7

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|++
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~p~~C~~   45 (46)
T 2yts_A            2 SSGSSGTGEKPYICNECGKSFIQKSHLNRHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCSCCCCSCCSEECSSSCCEESSHHHHHHHGGGTSSCCSSCCCC
T ss_pred             CCCCCCCCCcCEECCCCChhhCChHHHHHHHHhcCCCCCcCCCC
Confidence            36788999999999999999999999999999999999999974

>2ytt_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.3e-11  Score=62.12  Aligned_cols=43  Identities=33%  Similarity=0.414  Sum_probs=40.2

Q ss_pred             HhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          27 LKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        27 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      +++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.|
T Consensus         4 ~~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   46 (46)
T 2ytt_A            4 GSSGEGEKPYQCSECGKSFSGSYRLTQHWITHTREKPSGPSSG   46 (46)
T ss_dssp             SSSCSCCCTTCCSSSCCCCSSHHHHHHHHTHHHHCCCCSCCCC
T ss_pred             CCCCCCCCCeeCCCCCcccCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            4578899999999999999999999999999999999999987

>2yth_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.8e-11  Score=61.10  Aligned_cols=44  Identities=32%  Similarity=0.520  Sum_probs=40.6

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yth_A            2 SSGSSGSGEKPFQCEECGKRFTQNSHLHSHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCSSSBCCSSSCCCBSSHHHHHHHGGGGTTCCCSSCCC
T ss_pred             CcccCCCCCcCCCCCCCCcccCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999973

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=4.4e-11  Score=61.77  Aligned_cols=41  Identities=39%  Similarity=0.639  Sum_probs=30.9

Q ss_pred             hhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCc
Q psy9067         127 MRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACD  167 (189)
Q Consensus       127 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~  167 (189)
                      .+.|.+++||.|++|++.|.....|..|+++|+++++|.|+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~   44 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSS   44 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCC
Confidence            44566777777777777777777777777777777777775

>2em6_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=7.1e-11  Score=61.26  Aligned_cols=44  Identities=34%  Similarity=0.468  Sum_probs=40.7

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2em6_A            2 SSGSSGMGEKCYKCDVCGKEFSQSSHLQTHQRVHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSCCCCCCCCBCSSSCCBCSSHHHHHHHHTTTSSSCCCCTTC
T ss_pred             CCccccCCCCCeECCCCCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            46788999999999999999999999999999999999999974

>2en9_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.08  E-value=6.7e-11  Score=61.35  Aligned_cols=44  Identities=30%  Similarity=0.440  Sum_probs=40.7

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|++
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2en9_A            2 SSGSSGAGKKLFKCNECKKTFTQSSSLTVHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCSSCCSSCCCBCTTTCCBCSSHHHHHHHHHHHTSSCCCSCCC
T ss_pred             CCCCCCCCCCCEECCccCcccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36778999999999999999999999999999999999999974

>2eon_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.1e-11  Score=61.52  Aligned_cols=43  Identities=30%  Similarity=0.573  Sum_probs=40.1

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         3 h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eon_A            3 SGSSGTGEKPYKCQVCGKAFRVSSHLVQHHSVHSGERPSGPSS   45 (46)
T ss_dssp             CSSSCSSCCSCBCSSSCCBCSSHHHHHHHTTTTTSCCSCTTSC
T ss_pred             CCCCCCCCcccCCCCCCcccCcHHHHHHHHHhcCCCCCCCCCC
Confidence            5778999999999999999999999999999999999999974

>2eof_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=7.2e-11  Score=60.57  Aligned_cols=43  Identities=30%  Similarity=0.498  Sum_probs=40.0

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      .|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eof_A            2 SSGSSGTGEKPYECNECQKAFNTKSNLMVHQRTHTGESGPSSG   44 (44)
T ss_dssp             CCSSCCSCCCSEECTTTCCEESCHHHHHHHHHHTTTSSCSCCC
T ss_pred             CCccCCCCCCCeECCCCCcccCCHhHHHHHHHHhCCCCCCCCC
Confidence            4678899999999999999999999999999999999999985

>2eoh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=8.1e-11  Score=61.03  Aligned_cols=42  Identities=29%  Similarity=0.494  Sum_probs=39.6

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         3 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2eoh_A            3 SGSSGSGKKPYECKECRKTFIQIGHLNQHKRVHTGERSSGPS   44 (46)
T ss_dssp             CCCSCCCSCSCCCSSSCCCCSSHHHHHHHHHHCSSCCSCSTT
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCC
Confidence            678899999999999999999999999999999999999986

>2yrj_A Zinc finger protein 473; C2H2-type zinc finger, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.07  E-value=6.9e-11  Score=61.28  Aligned_cols=44  Identities=32%  Similarity=0.525  Sum_probs=40.6

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2yrj_A            2 SSGSSGTGEKPYRCGECGKAFAQKANLTQHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCCCCCEECSSSCCEESSHHHHHHHHTTTSSCCSSCSCC
T ss_pred             CCccCCCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2en7_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=7.3e-11  Score=60.55  Aligned_cols=43  Identities=26%  Similarity=0.397  Sum_probs=39.8

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2en7_A            2 SSGSSGTGMKPYVCNECGKAFRSKSYLIIHTRTHTGESGPSSG   44 (44)
T ss_dssp             CSCCCSSSSSSSCCTTTCCCCSSHHHHHHHHTTTCCSSSSCCC
T ss_pred             CCCcCCCCCcCeECCCCCCccCCHHHHHHHhhhcCCCCCCCCC
Confidence            4678899999999999999999999999999999999999885

>2eor_A Zinc finger protein 224; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.06  E-value=5.9e-11  Score=61.53  Aligned_cols=44  Identities=32%  Similarity=0.488  Sum_probs=40.7

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.+++||.|++
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~kp~~C~~   45 (46)
T 2eor_A            2 SSGSSGTGEKPYNCEECGKAFIHDSQLQEHQRIHTGEKPSGPSS   45 (46)
T ss_dssp             CSSSSSSCCCSEECTTTCCEESSHHHHHHHHHHHHSCCCSSSTT
T ss_pred             CCCcCcCCCcCccCCCCCCCcCCHHHHHHHHHhcCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999974

>2yu5_A Zinc finger protein 473; ZF-C2H2 domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=8.7e-11  Score=60.29  Aligned_cols=43  Identities=30%  Similarity=0.395  Sum_probs=39.8

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      +|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2yu5_A            2 SSGSSGAGENPFKCSKCDRVFTQRNYLVQHERTHARKSGPSSG   44 (44)
T ss_dssp             CCSCCCSCCCSEECSSSSCEESSSHHHHHHHHHCCCCCSSCCC
T ss_pred             CCccccCCCCCeECCCCCchhCCHHHHHHHhHhcCCCCCCCCC
Confidence            4678899999999999999999999999999999999999884

>2eoz_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.4e-11  Score=61.44  Aligned_cols=44  Identities=27%  Similarity=0.413  Sum_probs=40.8

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|+++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~~   45 (46)
T 2eoz_A            2 SSGSSGTGEKPYSCNVCGKAFVLSAHLNQHLRVHTQETLSGPSS   45 (46)
T ss_dssp             CSCCCCSSCCSEEETTTTEEESSHHHHHHHHHHHSSCCSSSCCC
T ss_pred             CccccCCCCCCeECcccChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46788999999999999999999999999999999999999973

>2epc_A Zinc finger protein 32; zinc finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2yta_A

Probab=99.05  E-value=1e-10  Score=59.35  Aligned_cols=41  Identities=24%  Similarity=0.380  Sum_probs=38.2

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccc
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC   66 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C   66 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|
T Consensus         2 H~~~H~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~~k~~~C   42 (42)
T 2epc_A            2 SSGSSGGETPYLCGQCGKSFTQRGSLAVHQRSCSQSGPSSG   42 (42)
T ss_dssp             CCSCCCSSCCEECSSSCCEESSHHHHHHHHHHTTCCCCCCC
T ss_pred             CCccCCCCCCeECCCCCcccCCHHHHHHHhhhcCCCCCCCC
Confidence            56788999999999999999999999999999999999987

>2eoj_A Zinc finger protein 268; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.05  E-value=6.4e-11  Score=60.77  Aligned_cols=43  Identities=26%  Similarity=0.402  Sum_probs=39.7

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      .|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eoj_A            2 SSGSSGTGENPYECCECGKVFSRKDQLVSHQKTHSGQSGPSSG   44 (44)
T ss_dssp             CSCCSSSSCCSCEETTTTEECSSHHHHHHHHTTSSSSCSCCCC
T ss_pred             CCccccCCCcCeeCCCCCCccCCHHHHHHHHHHcCCCCCCCCC
Confidence            3678899999999999999999999999999999999999884

>2emb_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.05  E-value=1e-10  Score=60.02  Aligned_cols=43  Identities=21%  Similarity=0.281  Sum_probs=39.9

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      .|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2emb_A            2 SSGSSGHTRKRYECSKCQATFNLRKHLIQHQKTHAAKSGPSSG   44 (44)
T ss_dssp             CCCSCCCCCSSEECTTTCCEESCHHHHHHHGGGGCCCCCTTCC
T ss_pred             CcccccCCCCCeECCCCCCccCCHHHHHHHHHHcCCCCCcCCC
Confidence            4678899999999999999999999999999999999999984

>2ytb_A Zinc finger protein 32; zinc-finger domain, C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=6.1e-11  Score=60.21  Aligned_cols=41  Identities=34%  Similarity=0.597  Sum_probs=38.0

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccc
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC   66 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C   66 (189)
                      |+++|.++++|.|+.|++.|.....|..|+..|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2ytb_A            2 SSGSSGGEKPYRCDQCGKAFSQKGSLIVHIRVHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSCCSBCCTTTTCCBSSHHHHHTTGGGTSCCSCCCC
T ss_pred             CccccCCCCCeeCCCccchhCCHHHHHHHHHHhCCCCCCCC
Confidence            67788999999999999999999999999999999999887

>2yto_A Zinc finger protein 484; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.04  E-value=8.2e-11  Score=61.01  Aligned_cols=43  Identities=30%  Similarity=0.481  Sum_probs=40.2

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      +|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (46)
T 2yto_A            2 SSGSSGTGEKPYKCSDCGKAFTRKSGLHIHQQSHTGERHSGPS   44 (46)
T ss_dssp             CCCCCCCSCCCEECSSSCCEESSHHHHHHHHHHHTCCCBTTTB
T ss_pred             CcccccCCCCCEECcccCCccCCHhHHHHHHHHcCCCCCCCCC
Confidence            4678899999999999999999999999999999999999986

>2eos_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=9e-11  Score=59.60  Aligned_cols=41  Identities=29%  Similarity=0.655  Sum_probs=37.7

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccc
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC   66 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C   66 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2eos_A            2 SSGSSGGEKPYPCEICGTRFRHLQTLKSHLRIHTGSGPSSG   42 (42)
T ss_dssp             CCSCCSSSCCBCCSSSCCCBSSHHHHHHHTTTTSCCSSTTC
T ss_pred             CCcccCCCCCEECCCCCCccCCHHHHHHHHHhcCCCCCCCC
Confidence            56788899999999999999999999999999999999887

>2eoy_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.04  E-value=9.4e-11  Score=60.79  Aligned_cols=44  Identities=30%  Similarity=0.381  Sum_probs=40.4

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCC-CCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTG-VKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~-~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.+ +++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~~C~~   46 (46)
T 2eoy_A            2 SSGSSGQKEKCFKCNKCEKTFSCSKYLTQHERIHTRGVKSGPSSG   46 (46)
T ss_dssp             CCCCCCCCSCCEECSSSCCEESSSHHHHHHHTTCCSCCTTSSSCC
T ss_pred             CCccccCCCCCEECcCCCCcCCCHHHHHHHHHHcCCCCCCCCCCC
Confidence            367889999999999999999999999999999999 99999963

>2enh_A Zinc finger protein 28 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.03  E-value=1.3e-10  Score=60.20  Aligned_cols=43  Identities=35%  Similarity=0.586  Sum_probs=39.6

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         3 h~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2enh_A            3 SGSSGTGEKPYECDVCRKAFSHHASLTQHQRVHSGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSSCBCTTTCCBCSSSHHHHHHGGGSCCSCCCCCCC
T ss_pred             CCCCcCCCCCcCCCCcCchhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            5678899999999999999999999999999999999999863

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.03  E-value=1.1e-10  Score=58.98  Aligned_cols=38  Identities=34%  Similarity=0.601  Sum_probs=24.4

Q ss_pred             hcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccC
Q psy9067         129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC  166 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  166 (189)
                      .|.+++||.|++|++.|.....|..|+++|++++||.|
T Consensus         4 ~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            4 GSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             ccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            35556666666666666666666666666666666665

>2eq3_A Zinc finger protein 347; C2H2, zinc finger domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.02  E-value=1.1e-10  Score=60.46  Aligned_cols=44  Identities=32%  Similarity=0.517  Sum_probs=40.6

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|+.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eq3_A            2 SSGSSGTGEKPYECNQCGKAFSVRSSLTTHQAIHTGKKPSGPSS   45 (46)
T ss_dssp             CCCCSSCCCCSSEETTTTEECSSHHHHHHHHTTSCCCCCCCSCC
T ss_pred             CcccCCCCCCCeECCCCChhhCCHHHHHHHHHHhCCCCCCCCCC
Confidence            46788999999999999999999999999999999999999963

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=99.01  E-value=7e-11  Score=58.21  Aligned_cols=35  Identities=37%  Similarity=0.607  Sum_probs=26.4

Q ss_pred             HHHHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       154 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |+++|++++||.|+.|++.|...+.|..|+++|++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   36 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhcc
Confidence            45567777777777788888877778888777765

>2emz_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.01  E-value=8.6e-11  Score=60.93  Aligned_cols=44  Identities=32%  Similarity=0.495  Sum_probs=40.5

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         2 ~h~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2emz_A            2 SSGSSGSGERPFKCNECGKGFGRRSHLAGHLRLHSREKSSGPSS   45 (46)
T ss_dssp             CCCSCSSCCCSCCCSSSCCCCSSHHHHHHHHHHHHHTTCCCSCC
T ss_pred             CCCcCCCCCCCeECCCCCcccCCHHHHHHHHHHhCCCCCCCCCC
Confidence            36788999999999999999999999999999999999999973

>2eou_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=99.01  E-value=1.8e-10  Score=59.11  Aligned_cols=42  Identities=19%  Similarity=0.304  Sum_probs=38.9

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|.
T Consensus         3 h~~~h~~~~~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~   44 (44)
T 2eou_A            3 SGSSGAAKTTSECQECGKIFRHSSLLIEHQALHAGESGPSSG   44 (44)
T ss_dssp             CSCSCSSSCCCCCTTTCCCCSSHHHHHHHHHHHTTSCCCCCC
T ss_pred             CCCCCCCCcCeECCCCCcccCCHHHHHHHHHHHCCCCCCCCC
Confidence            567888999999999999999999999999999999999984

>2en2_A B-cell lymphoma 6 protein; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=99.00  E-value=8.7e-11  Score=59.64  Aligned_cols=41  Identities=34%  Similarity=0.600  Sum_probs=37.9

Q ss_pred             HHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccc
Q psy9067          26 HLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC   66 (189)
Q Consensus        26 h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C   66 (189)
                      |+++|.++++|.|+.|++.|.....|..|++.|.++++|.|
T Consensus         2 H~~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~~~~~C   42 (42)
T 2en2_A            2 SSGSSGGEKPYKCETCGARFVQVAHLRAHVLIHTGSGPSSG   42 (42)
T ss_dssp             CCCCCCSSCSEECTTTCCEESSHHHHHHHTHHHHSCCSSCC
T ss_pred             CCcccCCCCCEeCCCcChhhCCHHHHHHHHHHcCCCCCCCC
Confidence            56788999999999999999999999999999999999887

>2en3_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=1e-10  Score=60.59  Aligned_cols=43  Identities=26%  Similarity=0.444  Sum_probs=39.9

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|+
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (46)
T 2en3_A            2 SSGSSGTGEKPFQCKECGMNFSWSCSLFKHLRSHERTDPSGPS   44 (46)
T ss_dssp             CCCCCSCCCCSEECSSSCCEESSSHHHHHHHHHHHHSCCSSCS
T ss_pred             ccccccCCCCCeeCcccChhhCCHHHHHHHHHHhCCCCCCCCC
Confidence            4678899999999999999999999999999999999999986

>2epv_A Zinc finger protein 268; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.1e-10  Score=58.17  Aligned_cols=43  Identities=30%  Similarity=0.406  Sum_probs=38.9

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      .|+++|.++++|.|+.|++.|.....|..|++.|.++++|.|.
T Consensus         2 ~H~~~H~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~~g   44 (44)
T 2epv_A            2 SSGSSGSGEKPYECNECGKAFIWKSLLIVHERTHAGVSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCSEECSSSCCEESSHHHHHHHHGGGSSCSCCCCC
T ss_pred             CCCcccCCCcCeECCCCCcccCchHHHHHHHhHhcCCCCCCCC
Confidence            3678899999999999999999999999999999999998763

>2yrm_A B-cell lymphoma 6 protein; ZF-C2H2, zinc binding, DNA binding, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=98.97  E-value=6.4e-10  Score=56.68  Aligned_cols=41  Identities=22%  Similarity=0.260  Sum_probs=37.8

Q ss_pred             hhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          28 KSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        28 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      ++|.++++|.|+.|++.|.....|..|++.|+++++|.|.+
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~   43 (43)
T 2yrm_A            3 SGSSGNGAFFCNECDCRFSEEASLKRHTLQTHSDKSGPSSG   43 (43)
T ss_dssp             SCCSSSCCBCCSSSCCCBSSHHHHHHHHHHHTCTTCSSSCC
T ss_pred             cCcCCCCCEECCCCCCeeCChHHHHHHHHhhCCCCCccCCC
Confidence            46788999999999999999999999999999999999974

>2ent_A Krueppel-like factor 15; zinc binding, transcription factor, adipogenesis, CLCNKA, chloride channel Ka, rhodopsin, IRBP; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.97  E-value=3.4e-10  Score=59.12  Aligned_cols=44  Identities=30%  Similarity=0.480  Sum_probs=40.5

Q ss_pred             HHhhCCCCCcccCC--CCCccccchhhHHHHHhhcCCCCCcccccC
Q psy9067          26 HLKSHSEERPHKCS--VCERGFKTIASLQNHINTHTGVKPHKCKYC   69 (189)
Q Consensus        26 h~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C   69 (189)
                      |.++|.++++|.|.  .|++.|.....|..|++.|.++++|.|..|
T Consensus         3 ~~~~H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~~C~~C   48 (48)
T 2ent_A            3 SGSSGTGEKPFACTWPGCGWRFSRSDELSRHRRSHSGVKPSGPSSG   48 (48)
T ss_dssp             CCCSSCCCCCEECCSSSCCCEESSHHHHHHHHTTSCCCCSCSSCCC
T ss_pred             CCCCcCCCCCeECCCCCCCCccCCHHHHHHHHHHhCCCCCCCCCCC
Confidence            34678899999998  899999999999999999999999999987

>2eom_A ZFP-95, zinc finger protein 95 homolog; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.96  E-value=5.1e-10  Score=57.95  Aligned_cols=42  Identities=33%  Similarity=0.460  Sum_probs=38.7

Q ss_pred             HhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          27 LKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        27 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      +++|.++++|.|+.|++.|.....|..|++.|.++++|.|.+
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (46)
T 2eom_A            4 GSSGHGERGHRCSDCGKFFLQASNFIQHRRIHTGEKPSGPSS   45 (46)
T ss_dssp             CCCCCCCSSCCCSSSCCCCSSHHHHHHHHHHHSSCCCSSCCC
T ss_pred             CCCCCCCCCcCCCCCCCeeCChHHHHHHHHHhCCCCCCCCCC
Confidence            467889999999999999999999999999999999999963

>2eox_A Zinc finger protein 473; ZF-C2H2, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.96  E-value=1.2e-10  Score=59.80  Aligned_cols=43  Identities=21%  Similarity=0.357  Sum_probs=39.5

Q ss_pred             HHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccc
Q psy9067          25 RHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCK   67 (189)
Q Consensus        25 ~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~   67 (189)
                      .|+++|.++++|.|+.|++.|.....|..|+..|.++++|.|.
T Consensus         2 ~H~~~H~~~~~~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~C~   44 (44)
T 2eox_A            2 SSGSSGTDSKSYNCNECGKAFTRIFHLTRHQKIHTRKSGPSSG   44 (44)
T ss_dssp             CCCCCCCCCCCEEETTTTEEESSSHHHHTTHHHHCCCCCCSCC
T ss_pred             CCCcCCCCCCCeECcccCcccCCHHHHHHHHHHhCCCCCCCCC
Confidence            3678899999999999999999999999999999999999884

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.94  E-value=4.1e-10  Score=55.65  Aligned_cols=32  Identities=22%  Similarity=0.380  Sum_probs=25.2

Q ss_pred             hhCCCcccCcc--chhccCCchHHHHHHhhhCCC
Q psy9067         158 HTGEKPYACDI--CHARFTQSNSLKSHRLIHTPL  189 (189)
Q Consensus       158 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  189 (189)
                      +++++||+|+.  |+++|..++.|.+|+++|++.
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            46678888875  888888888888888888763

>2epu_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: k.12.1.1

Probab=98.93  E-value=3.4e-10  Score=58.30  Aligned_cols=42  Identities=26%  Similarity=0.497  Sum_probs=38.4

Q ss_pred             HhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccccc
Q psy9067          27 LKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKY   68 (189)
Q Consensus        27 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~   68 (189)
                      ..+|.++++|.|+.|++.|.....|..|++.|.++++|.|+.
T Consensus         4 ~~~h~~~k~~~C~~C~k~F~~~~~L~~H~~~H~~~k~~~C~~   45 (45)
T 2epu_A            4 GSSGTGQKPFECTHCGKSFRAKGNLVTHQRIHTGEKSGPSSG   45 (45)
T ss_dssp             CCCCCSCCSEEETTTTEEESSHHHHHHHHTTTSSCCCCCSCC
T ss_pred             CCCCCCCcCccCCCCCCccCChHHHHHHHHHhCCCCCCCCCC
Confidence            456888999999999999999999999999999999999963

>2ept_A Zinc finger protein 32; C2H2, zinc finger domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.93  E-value=9.4e-10  Score=55.38  Aligned_cols=39  Identities=31%  Similarity=0.528  Sum_probs=35.9

Q ss_pred             hhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccc
Q psy9067          28 KSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC   66 (189)
Q Consensus        28 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C   66 (189)
                      ++|.++++|.|+.|++.|.....|..|+..|.+++||.|
T Consensus         3 ~~h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~C   41 (41)
T 2ept_A            3 SGSSGQRVYECQECGKSFRQKGSLTLHERIHTGSGPSSG   41 (41)
T ss_dssp             SSCCCCCCEECSSSCCEESSHHHHHHHGGGCCCCSCSCC
T ss_pred             CccCCCCCeECCCCCCCcCCHHHHHHHHHHhCCCCCcCC
Confidence            467889999999999999999999999999999999887

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.91  E-value=3.6e-11  Score=71.38  Aligned_cols=56  Identities=25%  Similarity=0.319  Sum_probs=38.7

Q ss_pred             hhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhh
Q psy9067         127 MRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       127 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  186 (189)
                      ..+|.+++||.|++|++.|.....|..|+++|++++||+|..|..    ...|..|+++|
T Consensus        17 ~~~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~   72 (88)
T 1x6f_A           17 NGPRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYA   72 (88)
T ss_dssp             CCSCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCC
T ss_pred             ccccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccc
Confidence            445677778888888888888888888888887777888766543    34444444444

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.86  E-value=3.7e-10  Score=55.62  Aligned_cols=34  Identities=26%  Similarity=0.429  Sum_probs=27.1

Q ss_pred             HHhhCCCcccCccchhccCCchHHHHH-HhhhCCC
Q psy9067         156 RIHTGEKPYACDICHARFTQSNSLKSH-RLIHTPL  189 (189)
Q Consensus       156 ~~h~~~~~~~C~~C~~~f~~~~~l~~H-~~~h~~~  189 (189)
                      ++|++++||.|+.||+.|...+.|..| +++|+++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            356778888888888888888888888 7887763

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.85  E-value=4.3e-10  Score=55.28  Aligned_cols=31  Identities=26%  Similarity=0.682  Sum_probs=16.4

Q ss_pred             hhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         158 HTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       158 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |+++++|.|..||+.|...++|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~   34 (37)
T 2elo_A            4 GSSGRSYSCPVCEKSFSEDRLIKSHIKTNHP   34 (37)
T ss_dssp             CCCCCCCEETTTTEECSSHHHHHHHHHHHCS
T ss_pred             CCCCCCcCCCCCCCccCCHHHHHHHHHHHcC
Confidence            4445555555555555555555555555543

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.85  E-value=1.1e-09  Score=53.06  Aligned_cols=31  Identities=29%  Similarity=0.544  Sum_probs=19.5

Q ss_pred             hhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         158 HTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       158 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |+++++|.|++|++.|...++|..|+++|++
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~   32 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHG   32 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcC
Confidence            4556666666666666666666666666654

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.85  E-value=1.9e-09  Score=53.64  Aligned_cols=36  Identities=19%  Similarity=0.403  Sum_probs=24.4

Q ss_pred             CCCCCccCccCCccCCChHHHHHHHHHhhCCCcccC
Q psy9067         131 TGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYAC  166 (189)
Q Consensus       131 ~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C  166 (189)
                      .+++||.|++|++.|...+.|..|+++|+++++|.+
T Consensus         2 ~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            2 WPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            455667777777777777777777777776666654

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.84  E-value=1.1e-09  Score=53.03  Aligned_cols=31  Identities=32%  Similarity=0.759  Sum_probs=20.3

Q ss_pred             hhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         158 HTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       158 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |+++++|.|.+|++.|...++|..|+++|++
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   32 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCC
Confidence            4556666666666666666666666666654

>1p7a_A BF3, BKLF, kruppel-like factor 3; classical zinc finger, transcription factor, DNA binding protein; NMR {Mus musculus} SCOP: g.37.1.1 PDB: 1u85_A 1u86_A

Probab=98.80  E-value=4.3e-09  Score=51.56  Aligned_cols=36  Identities=28%  Similarity=0.474  Sum_probs=31.3

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      |++.|.+++||.|++|++.|.....|..|+++|+++
T Consensus         2 H~~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   37 (37)
T 1p7a_A            2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCcCCCCCCccCCCCCcccCcHHHHHHHHHHhccC
Confidence            677888899999999999999999999999888763

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.79  E-value=6.6e-09  Score=49.57  Aligned_cols=32  Identities=16%  Similarity=0.290  Sum_probs=23.4

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCCCccc
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYA  165 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  165 (189)
                      +||.|++|++.|...+.|..|+++|+++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            46777777777777777777777777777664

>2elo_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.79  E-value=3.6e-09  Score=51.85  Aligned_cols=36  Identities=22%  Similarity=0.448  Sum_probs=27.9

Q ss_pred             hhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCc
Q psy9067         128 RSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKP  163 (189)
Q Consensus       128 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  163 (189)
                      +.|.+++||.|++|++.|.....|..|+++|++++|
T Consensus         2 ~~h~~~k~~~C~~C~k~f~~~~~l~~H~~~h~~~kp   37 (37)
T 2elo_A            2 SSGSSGRSYSCPVCEKSFSEDRLIKSHIKTNHPEVS   37 (37)
T ss_dssp             CCCCCCCCCEETTTTEECSSHHHHHHHHHHHCSSCC
T ss_pred             CCCCCCCCcCCCCCCCccCCHHHHHHHHHHHcCCCC
Confidence            356677888888888888888888888888877654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.78  E-value=2.3e-09  Score=52.16  Aligned_cols=31  Identities=29%  Similarity=0.454  Sum_probs=22.0

Q ss_pred             hhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         158 HTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       158 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |.++++|.|++|++.|...+.|..|+++|++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elt_A            4 GSSGKPYKCPQCSYASAIKANLNVHLRKHTG   34 (36)
T ss_dssp             SCCCCSEECSSSSCEESSHHHHHHHHHHHTC
T ss_pred             CCCCCCCCCCCCCcccCCHHHHHHHHHHccC
Confidence            5566777777777777777777777777664

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.77  E-value=2e-09  Score=52.47  Aligned_cols=32  Identities=25%  Similarity=0.523  Sum_probs=23.6

Q ss_pred             HhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         157 IHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       157 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .|+++++|.|.+|++.|...+.|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elv_A            3 SGSSGLLYDCHICERKFKNELDRDRHMLVHGD   34 (36)
T ss_dssp             CSCCCCCEECSSSCCEESSHHHHHHHHTTTST
T ss_pred             CCCCCCCeECCCCCCccCCHHHHHHHHHHhcC
Confidence            35667777777777777777777777777764

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=3e-09  Score=51.81  Aligned_cols=32  Identities=25%  Similarity=0.540  Sum_probs=23.0

Q ss_pred             HhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         157 IHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       157 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .|+++++|.|++|++.|.+.+.|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHST   34 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSST
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhcc
Confidence            35667777777777777777777777777765

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.76  E-value=2.7e-09  Score=55.75  Aligned_cols=30  Identities=40%  Similarity=0.789  Sum_probs=16.0

Q ss_pred             hhCCCcccCccchhccCCchHHHHHHh-hhC
Q psy9067         158 HTGEKPYACDICHARFTQSNSLKSHRL-IHT  187 (189)
Q Consensus       158 h~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~  187 (189)
                      |+++++|.|.+||+.|.+.++|..|++ +|+
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~   32 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHL   32 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSC
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcC
Confidence            444555555555555555555555555 444

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.76  E-value=1.9e-09  Score=52.87  Aligned_cols=32  Identities=19%  Similarity=0.419  Sum_probs=21.7

Q ss_pred             HhhCCCcccCccchhccCCc-hHHHHHHhhhCC
Q psy9067         157 IHTGEKPYACDICHARFTQS-NSLKSHRLIHTP  188 (189)
Q Consensus       157 ~h~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~  188 (189)
                      +|+++++|.|+.|++.|... +.|..|+++|++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~   35 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEG   35 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHT
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCC
Confidence            45566677777777777776 677777766654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.74  E-value=1e-08  Score=56.82  Aligned_cols=38  Identities=29%  Similarity=0.467  Sum_probs=26.6

Q ss_pred             CCCCCccCcc--CCccCCChHHHHHHH-HHhhCCCcccCcc
Q psy9067         131 TGERPYQCAH--CTYASPDTFKLKRHL-RIHTGEKPYACDI  168 (189)
Q Consensus       131 ~~~~~~~C~~--C~~~f~~~~~l~~H~-~~h~~~~~~~C~~  168 (189)
                      .+++||.|+.  |+++|...+.|..|+ ++|++++||.|..
T Consensus        23 sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           23 SPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             CSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             cCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            4667777754  777777777777775 5677777777643

>2d9k_A FLN29 gene product; zinc finger, ZF-TRAF, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.74  E-value=2.6e-10  Score=65.64  Aligned_cols=62  Identities=19%  Similarity=0.325  Sum_probs=55.0

Q ss_pred             hHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhhhhh
Q psy9067          21 YLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVRY   85 (189)
Q Consensus        21 ~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h~~~   85 (189)
                      ..|..|+.++.+++++.|+.|+..|. ...|..|+ .+.+++++.|+.|++.|. ...|..|+.+
T Consensus         3 ~~L~~H~~~~c~~r~~~C~~C~~~~~-~~~L~~H~-~~c~~~~~~C~~C~~~~~-~~~l~~H~~~   64 (75)
T 2d9k_A            3 SGSSGHEETECPLRLAVCQHCDLELS-ILKLKEHE-DYCGARTELCGNCGRNVL-VKDLKTHPEV   64 (75)
T ss_dssp             CCCSCCCCCCCCCCCEECSSSCCEEC-HHHHHHHH-HHHHHCEEECSSSCCEEE-TTGGGTHHHH
T ss_pred             hHHHhhCcccCCCcccCCcccChHhh-HHHHHHHH-hHcCCCceEcccCCCcCc-HHHHHHHHHH
Confidence            34667888899999999999999995 89999999 889999999999999877 5889999875

>1njq_A Superman protein; zinc-finger, peptide-zinc complex, beta-BETA-ALFA motif, metal binding protein; NMR {Synthetic} SCOP: g.37.1.3 PDB: 2l1o_A

Probab=98.73  E-value=1.1e-08  Score=50.70  Aligned_cols=37  Identities=27%  Similarity=0.510  Sum_probs=32.4

Q ss_pred             CCCCCcccCCCCCccccchhhHHHHHhhcCCCCCccc
Q psy9067          30 HSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKC   66 (189)
Q Consensus        30 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C   66 (189)
                      |.++++|.|+.|++.|.....|..|++.|.++++|.+
T Consensus         1 h~~~k~~~C~~C~k~f~~~~~L~~H~~~H~~~k~~~~   37 (39)
T 1njq_A            1 XWPPRSYTCSFCKREFRSAQALGGHMNVHRRDRARLR   37 (39)
T ss_dssp             -CCSSSEECTTTCCEESSHHHHHHHHHTTCCSCTTTT
T ss_pred             CCCCCceECCCCCcccCCHHHHHHHHHHcCCCcccee
Confidence            4577899999999999999999999999999988865

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.73  E-value=4.6e-09  Score=51.08  Aligned_cols=31  Identities=39%  Similarity=0.792  Sum_probs=18.8

Q ss_pred             hhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         158 HTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       158 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |.++++|.|++|++.|.+.+.|..|+++|++
T Consensus         4 h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2elr_A            4 GSSGKTHLCDMCGKKFKSKGTLKSHKLLHTA   34 (36)
T ss_dssp             CCCCSSCBCTTTCCBCSSHHHHHHHHHHHSS
T ss_pred             CCCCCCeecCcCCCCcCchHHHHHHHHHhcC
Confidence            4455666666666666666666666666554

>2elx_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Mus musculus}

Probab=98.71  E-value=1e-08  Score=49.45  Aligned_cols=34  Identities=26%  Similarity=0.534  Sum_probs=24.9

Q ss_pred             cCCCCCccCccCCccCCChHHHHHHHHHhhCCCc
Q psy9067         130 HTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKP  163 (189)
Q Consensus       130 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  163 (189)
                      |.+++||.|++|++.|.....|..|+++|++++|
T Consensus         2 h~~~k~~~C~~C~k~f~~~~~L~~H~~~h~~~kp   35 (35)
T 2elx_A            2 SSGSSGYVCALCLKKFVSSIRLRSHIREVHGAAQ   35 (35)
T ss_dssp             CCCCCSEECSSSCCEESSHHHHHHHHHHTSCTTC
T ss_pred             CCCCCCeECCCCcchhCCHHHHHHHHHHHcCCCC
Confidence            4566777777777777777777777777776653

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.71  E-value=6.6e-09  Score=50.54  Aligned_cols=31  Identities=32%  Similarity=0.620  Sum_probs=21.6

Q ss_pred             hhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         158 HTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       158 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |.++++|.|+.|++.|...+.|..|+++|++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~   34 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTN   34 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCC
Confidence            4556677777777777777777777777664

>1srk_A Zinc finger protein ZFPM1; classical zinc finger, transcription; NMR {Mus musculus} SCOP: g.37.1.1

Probab=98.70  E-value=1.1e-08  Score=49.30  Aligned_cols=34  Identities=32%  Similarity=0.644  Sum_probs=24.6

Q ss_pred             cCCCCCccCccCCccCCChHHHHHHHHHhhCCCc
Q psy9067         130 HTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKP  163 (189)
Q Consensus       130 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  163 (189)
                      |.+++||.|.+|++.|...+.|..|+++|++++|
T Consensus         2 H~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~~~   35 (35)
T 1srk_A            2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDTLS   35 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSCCC
T ss_pred             CCCCcCeeCCCCCcccCCHHHHHHHHHHcCCCCC
Confidence            4566777777777777777777777777776653

>1x6f_A Zinc finger protein 462; zinc finger domain, KIAA1803, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.70  E-value=1.3e-10  Score=68.95  Aligned_cols=56  Identities=14%  Similarity=0.241  Sum_probs=46.2

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhC
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  160 (189)
                      .+.++++|.|+.|++.|.....|..|++.|.+++||.|..|.+    ...|..|.++|.+
T Consensus        19 ~H~~~kpy~C~~C~k~F~~~~~L~~H~~~Ht~ekp~~C~~~~~----~~~~~~~~~~~~~   74 (88)
T 1x6f_A           19 PRLQNSTYQCKHCDSKLQSTAELTSHLNIHNEEFQKRAKRQER----RKQLLSKQKYADG   74 (88)
T ss_dssp             SCCCCSCEECSSSCCEESSHHHHHHHHHHHHHHHHHHCCCCSC----CCCCCCCCCCCCC
T ss_pred             ccCCCCCCcCCCCCCEeCCHHHHHHHHHHhCCCCCcccchhhh----HHHHHhhhccccc
Confidence            4778899999999999999999999999999999999987763    3344456666654

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.70  E-value=6.9e-09  Score=47.36  Aligned_cols=28  Identities=32%  Similarity=0.864  Sum_probs=23.7

Q ss_pred             CCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         161 EKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       161 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +++|.|+.||+.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (28)
T 2kvf_A            1 MRPYSCSVCGKRFSLKHQMETHYRVHTG   28 (28)
T ss_dssp             CCSEECSSSCCEESCHHHHHHHHTTSCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHhcCC
Confidence            4678899999999998899999888865

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.67  E-value=9.5e-09  Score=46.47  Aligned_cols=27  Identities=30%  Similarity=0.695  Sum_probs=22.3

Q ss_pred             CCcccCccchhccCCchHHHHHHhhhC
Q psy9067         161 EKPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       161 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      ++||.|+.||+.|...+.|..|+++|+
T Consensus         1 ek~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvh_A            1 EKPFSCSLCPQRSRDFSAMTKHLRTHG   27 (27)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHHHCC
T ss_pred             CcCccCCCcChhhCCHHHHHHHHHHcc
Confidence            467888888888888888888888774

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.65  E-value=7.6e-09  Score=46.89  Aligned_cols=27  Identities=30%  Similarity=0.634  Sum_probs=22.8

Q ss_pred             CCcccCccchhccCCchHHHHHHhhhC
Q psy9067         161 EKPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       161 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      ++||.|+.||+.|...++|..|+++|+
T Consensus         1 ~k~~~C~~C~k~f~~~~~l~~H~~~H~   27 (27)
T 2kvg_A            1 AAPYRCPLCRAGCPSLASMQAHMRGHS   27 (27)
T ss_dssp             CCTEEETTTTEEESCHHHHHHHHTTCC
T ss_pred             CcCcCCCCCCcccCCHHHHHHHHHhcC
Confidence            468889999999999999999988874

>2eln_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.65  E-value=2.2e-08  Score=49.33  Aligned_cols=32  Identities=34%  Similarity=0.807  Sum_probs=24.7

Q ss_pred             cCCCCCccCcc--CCccCCChHHHHHHHHHhhCC
Q psy9067         130 HTGERPYQCAH--CTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       130 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +.+++||.|++  |+++|...+.|..|+++|+++
T Consensus         4 ~~gekp~~C~~~~C~k~F~~~~~L~~H~r~Htg~   37 (38)
T 2eln_A            4 GSSGILLKCPTDGCDYSTPDKYKLQAHLKVHTAL   37 (38)
T ss_dssp             SSCCCCEECSSSSCCCEESCHHHHHHHHHHHSCC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCC
Confidence            45677888875  888888888888888888765

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=3.5e-08  Score=48.48  Aligned_cols=34  Identities=18%  Similarity=0.404  Sum_probs=22.1

Q ss_pred             CCCCCccCc--cCCccCCChHHHHHHHHHhhCCCcc
Q psy9067         131 TGERPYQCA--HCTYASPDTFKLKRHLRIHTGEKPY  164 (189)
Q Consensus       131 ~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~~~  164 (189)
                      .+++||.|.  .|++.|...+.|..|+++|+++++|
T Consensus         2 ~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~k~~   37 (38)
T 1bhi_A            2 SDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEMTLKF   37 (38)
T ss_dssp             TTCCCEECCCTTTCCEESSHHHHHHHHHHHHTTTTT
T ss_pred             CCCcceECCCCCCCcccCCHHHHHHHHHHhCCCCCC
Confidence            455666666  3666666666666666666666654

>1x3c_A Zinc finger protein 292; DNA binding, nuclear protein, C2H2-type zinc finger, KIAA0530, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.60  E-value=5.7e-08  Score=53.84  Aligned_cols=39  Identities=26%  Similarity=0.318  Sum_probs=34.0

Q ss_pred             CCCCCcccCCC--CCccccchhhHHHHH-hhcCCCCCccccc
Q psy9067          30 HSEERPHKCSV--CERGFKTIASLQNHI-NTHTGVKPHKCKY   68 (189)
Q Consensus        30 ~~~~~~~~C~~--C~~~f~~~~~l~~H~-~~~~~~~~~~C~~   68 (189)
                      .++++||.|++  |++.|...++|..|+ +.|++++|+.|..
T Consensus        22 ~sGEKPYkC~~~~CgKaFsr~s~L~~H~rriHTgEKP~~~~~   63 (73)
T 1x3c_A           22 YSPYRPYRCVHQGCFAAFTIQQNLILHYQAVHKSDLPAFSAE   63 (73)
T ss_dssp             SCSSCSCBCCSTTCCCBCSSHHHHHHHHHHHSSSCCCCCCCS
T ss_pred             ccCCCCeECCCCCcChhHcCHHHHHHHhhhhCCCCCCccccc
Confidence            46789999976  999999999999997 6799999988865

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.59  E-value=2.4e-08  Score=46.12  Aligned_cols=28  Identities=36%  Similarity=0.673  Sum_probs=20.1

Q ss_pred             CCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         161 EKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       161 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +++|.|..||+.|...+.|..|+++|++
T Consensus         1 ~k~~~C~~C~~~f~~~~~l~~H~~~h~~   28 (30)
T 2m0d_A            1 MKPYQCDYCGRSFSDPTSKMRHLETHDT   28 (30)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHTTCC
T ss_pred             CcCccCCCCCcccCCHHHHHHHHHHhcc
Confidence            3567777777777777777777777765

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.58  E-value=1.7e-08  Score=49.44  Aligned_cols=31  Identities=26%  Similarity=0.471  Sum_probs=18.7

Q ss_pred             hhCCCcccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         158 HTGEKPYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       158 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |+++++|.|.+  ||+.|...+.|..|+++|++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   35 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTG   35 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHT
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCC
Confidence            34556666653  66666666666666666654

>2elp_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.58  E-value=3.7e-08  Score=48.06  Aligned_cols=34  Identities=29%  Similarity=0.551  Sum_probs=27.5

Q ss_pred             hcCCCCCccCccCCccCCCh-HHHHHHHHHhhCCC
Q psy9067         129 SHTGERPYQCAHCTYASPDT-FKLKRHLRIHTGEK  162 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~-~~l~~H~~~h~~~~  162 (189)
                      +|.+++||.|++|++.|... +.|..|+++|++++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~~L~~H~~~H~~~k   37 (37)
T 2elp_A            3 SGSSGRAMKCPYCDFYFMKNGSDLQRHIWAHEGVK   37 (37)
T ss_dssp             SCCCCCCEECSSSSCEECSSCHHHHHHHHHHHTCC
T ss_pred             CCCCCCCeECCCCChhhccCHHHHHHHHHhcCCCC
Confidence            46677888888888888888 88888888887653

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.58  E-value=2.6e-08  Score=45.66  Aligned_cols=27  Identities=37%  Similarity=0.705  Sum_probs=23.1

Q ss_pred             CcccCccchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|+.||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHEN   27 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGS
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcC
Confidence            478899999999999999999888875

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.58  E-value=2.4e-08  Score=55.53  Aligned_cols=34  Identities=18%  Similarity=0.246  Sum_probs=28.8

Q ss_pred             hcCCCCCccCccCCccCCChHHHHHHHHHhhCCC
Q psy9067         129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      .+.+++||.|.+|++.|.....|..|+++|+++.
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~   40 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS   40 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc
Confidence            3566789999999999999999999999998754

>2elq_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=3.9e-08  Score=47.69  Aligned_cols=33  Identities=33%  Similarity=0.743  Sum_probs=24.6

Q ss_pred             hcCCCCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      .|.+++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elq_A            3 SGSSGKPFKCSLCEYATRSKSNLKAHMNRHSTE   35 (36)
T ss_dssp             SSCCCCSEECSSSSCEESCHHHHHHHHHHSSTT
T ss_pred             CCCCCCCccCCCCCchhCCHHHHHHHHHHhccC
Confidence            456677778888888888877887787777654

>2elt_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=4.9e-08  Score=47.24  Aligned_cols=33  Identities=48%  Similarity=0.899  Sum_probs=24.4

Q ss_pred             hcCCCCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +|.+++||.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elt_A            3 SGSSGKPYKCPQCSYASAIKANLNVHLRKHTGE   35 (36)
T ss_dssp             CSCCCCSEECSSSSCEESSHHHHHHHHHHHTCC
T ss_pred             CCCCCCCCCCCCCCcccCCHHHHHHHHHHccCC
Confidence            355677777777777777777777777777665

>2elr_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.57  E-value=7.3e-08  Score=46.60  Aligned_cols=33  Identities=24%  Similarity=0.345  Sum_probs=24.5

Q ss_pred             hcCCCCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      .|.++++|.|++|++.|.....|..|+++|+++
T Consensus         3 ~h~~~~~~~C~~C~k~f~~~~~l~~H~~~H~~e   35 (36)
T 2elr_A            3 SGSSGKTHLCDMCGKKFKSKGTLKSHKLLHTAD   35 (36)
T ss_dssp             CCCCCSSCBCTTTCCBCSSHHHHHHHHHHHSSC
T ss_pred             CCCCCCCeecCcCCCCcCchHHHHHHHHHhcCC
Confidence            355677778888888888888888887777665

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.56  E-value=3.7e-08  Score=45.09  Aligned_cols=27  Identities=30%  Similarity=0.746  Sum_probs=21.3

Q ss_pred             CcccCccchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|+.||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcC
Confidence            367888888888888888888888765

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.55  E-value=3.2e-08  Score=44.57  Aligned_cols=26  Identities=27%  Similarity=0.798  Sum_probs=21.7

Q ss_pred             cccCccchhccCCchHHHHHHhhhCC
Q psy9067         163 PYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ||.|..||+.|.+.+.|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            57888899999988889999888875

>2elv_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.55  E-value=3.5e-08  Score=47.85  Aligned_cols=32  Identities=19%  Similarity=0.435  Sum_probs=21.7

Q ss_pred             cCCCCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         130 HTGERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       130 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      |.+++||.|++|++.|.....|..|+++|+++
T Consensus         4 h~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2elv_A            4 GSSGLLYDCHICERKFKNELDRDRHMLVHGDK   35 (36)
T ss_dssp             SCCCCCEECSSSCCEESSHHHHHHHHTTTSTT
T ss_pred             CCCCCCeECCCCCCccCCHHHHHHHHHHhcCC
Confidence            45566777777777777777777777666554

>1rim_A E6APC2 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1

Probab=98.55  E-value=7.2e-08  Score=45.81  Aligned_cols=32  Identities=22%  Similarity=0.437  Sum_probs=27.7

Q ss_pred             CcccCCCCCccccchhhHHHHHhhcCCCCCcc
Q psy9067          34 RPHKCSVCERGFKTIASLQNHINTHTGVKPHK   65 (189)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~   65 (189)
                      +||.|+.|++.|.....|..|+..|.++++|.
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~~~H~~~~~~~   32 (33)
T 1rim_A            1 YKFACPECPKRFMRSDHLSKHITLHELLGEER   32 (33)
T ss_dssp             CCCCCSSSCCCCSSHHHHHHHHHHHTTTCCCC
T ss_pred             CcccCCCCCchhCCHHHHHHHHHHhCCCCCCC
Confidence            47889999999999999999999998888774

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.53  E-value=4.1e-08  Score=47.65  Aligned_cols=24  Identities=21%  Similarity=0.373  Sum_probs=12.4

Q ss_pred             CCCCccCccCCccCCChHHHHHHH
Q psy9067         132 GERPYQCAHCTYASPDTFKLKRHL  155 (189)
Q Consensus       132 ~~~~~~C~~C~~~f~~~~~l~~H~  155 (189)
                      +++||.|++|+++|...+.|..|+
T Consensus         5 gekp~~C~~CgK~F~~~s~L~~H~   28 (36)
T 1fv5_A            5 KPARFMCLPCGIAFSSPSTLEAHQ   28 (36)
T ss_dssp             SCCCCEETTTTEECSCHHHHHHHH
T ss_pred             CccCeECCCCCCccCCHhHccCcC
Confidence            445555555555555555555554

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.52  E-value=7e-08  Score=45.35  Aligned_cols=28  Identities=32%  Similarity=0.804  Sum_probs=20.0

Q ss_pred             CCcccCc--cchhccCCchHHHHHHhhhCC
Q psy9067         161 EKPYACD--ICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       161 ~~~~~C~--~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ++||.|.  .||+.|...+.|..|+++|++
T Consensus         1 ek~~~C~~~~C~k~f~~~~~L~~H~~~H~~   30 (32)
T 1zfd_A            1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CCCCcCcCCCCCCccCCHHHHHHHHHHccC
Confidence            3567777  677777777777777777765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.52  E-value=1.1e-08  Score=53.02  Aligned_cols=33  Identities=21%  Similarity=0.405  Sum_probs=20.8

Q ss_pred             HHhhCCCcccCc--cchhccCCchHHHHHHhhhCC
Q psy9067         156 RIHTGEKPYACD--ICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       156 ~~h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ..|+++++|.|.  .||+.|...++|..|+++|++
T Consensus        11 ~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~   45 (47)
T 1ncs_A           11 VKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             CEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             hccCCCCCeECCCCCCCCccCCHHHHHHHHHHccC
Confidence            345666666664  466666666666666666654

>1bhi_A CRE-BP1, ATF-2; CRE binding protein, transcriptional activation domain, Zn finger, DNA-binding regulatory protein; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.51  E-value=3.4e-08  Score=48.52  Aligned_cols=31  Identities=32%  Similarity=0.672  Sum_probs=28.2

Q ss_pred             hhCCCcccCc--cchhccCCchHHHHHHhhhCC
Q psy9067         158 HTGEKPYACD--ICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       158 h~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |+++++|.|.  .|++.|...++|..|+++|++
T Consensus         1 H~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~   33 (38)
T 1bhi_A            1 MSDDKPFLCTAPGCGQRFTNEDHLAVHKHKHEM   33 (38)
T ss_dssp             CTTCCCEECCCTTTCCEESSHHHHHHHHHHHHT
T ss_pred             CCCCcceECCCCCCCcccCCHHHHHHHHHHhCC
Confidence            4678999999  599999999999999999875

>1fv5_A First zinc finger of U-shaped; CCHC, protein interaction, transcription; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1y0j_B 2l6z_B

Probab=98.51  E-value=3.2e-08  Score=48.05  Aligned_cols=28  Identities=18%  Similarity=0.421  Sum_probs=25.2

Q ss_pred             hhCCCcccCccchhccCCchHHHHHHhh
Q psy9067         158 HTGEKPYACDICHARFTQSNSLKSHRLI  185 (189)
Q Consensus       158 h~~~~~~~C~~C~~~f~~~~~l~~H~~~  185 (189)
                      +.+++||.|+.||++|++.++|.+|+..
T Consensus         3 ~~gekp~~C~~CgK~F~~~s~L~~H~py   30 (36)
T 1fv5_A            3 LLKPARFMCLPCGIAFSSPSTLEAHQAY   30 (36)
T ss_dssp             SSSCCCCEETTTTEECSCHHHHHHHHHH
T ss_pred             CCCccCeECCCCCCccCCHhHccCcCCe
Confidence            3679999999999999999999999843

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.91  E-value=1.2e-08  Score=45.63  Aligned_cols=26  Identities=46%  Similarity=0.866  Sum_probs=21.2

Q ss_pred             CcccCccchhccCCchHHHHHHhhhC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      +||.|+.||+.|...+.|..|+++|+
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H~   26 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHHD   26 (26)
Confidence            46888888888888888888888764

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.50  E-value=6.9e-08  Score=44.46  Aligned_cols=27  Identities=33%  Similarity=0.616  Sum_probs=22.1

Q ss_pred             CcccCccchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ++|.|+.||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~   27 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHcc
Confidence            468888888888888888888888875

>2els_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.50  E-value=9.4e-08  Score=46.26  Aligned_cols=32  Identities=31%  Similarity=0.547  Sum_probs=22.2

Q ss_pred             cCCCCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         130 HTGERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       130 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +.+++||.|++|++.|.....|..|+++|+++
T Consensus         4 ~~~~k~~~C~~C~k~f~~~~~l~~H~~~H~~~   35 (36)
T 2els_A            4 GSSGKIFTCEYCNKVFKFKHSLQAHLRIHTNE   35 (36)
T ss_dssp             TSCCCCEECTTTCCEESSHHHHHHHHHHHCCC
T ss_pred             CCCCCCEECCCCCceeCCHHHHHHHHHHhCCC
Confidence            44566777777777777777777777777654

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.50  E-value=4.9e-08  Score=44.61  Aligned_cols=27  Identities=37%  Similarity=0.656  Sum_probs=21.0

Q ss_pred             CcccCccchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|+.||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~   27 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIA   27 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHS
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhcc
Confidence            467888888888888888888877764

>2elm_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}

Probab=98.48  E-value=9.3e-08  Score=46.68  Aligned_cols=34  Identities=29%  Similarity=0.414  Sum_probs=27.2

Q ss_pred             hhCCCCCcccCCCCCccccchhhHHHH-HhhcCCC
Q psy9067          28 KSHSEERPHKCSVCERGFKTIASLQNH-INTHTGV   61 (189)
Q Consensus        28 ~~~~~~~~~~C~~C~~~f~~~~~l~~H-~~~~~~~   61 (189)
                      ++|.+++||.|+.|++.|.....|..| +..|.++
T Consensus         2 ~~H~~~k~~~C~~C~k~f~~~~~L~~H~~~~H~~~   36 (37)
T 2elm_A            2 SSGSSGHLYYCSQCHYSSITKNCLKRHVIQKHSNI   36 (37)
T ss_dssp             CSSSSSCEEECSSSSCEEECHHHHHHHHHHHTCCC
T ss_pred             CccCCCcCeECCCCCcccCCHHHHHHHHHHHccCc
Confidence            467788888888888888888888888 7777543

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=1.8e-08  Score=46.34  Aligned_cols=27  Identities=44%  Similarity=0.698  Sum_probs=22.5

Q ss_pred             CcccCccchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|+.||+.|...++|..|+++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTG   27 (29)
Confidence            468888888888888888888888865

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.86  E-value=1.8e-08  Score=46.64  Aligned_cols=27  Identities=41%  Similarity=0.817  Sum_probs=20.4

Q ss_pred             CcccCccchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|+.||+.|...+.|..|+++|++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~   28 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTG   28 (30)
Confidence            567777777777777777777777764

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.47  E-value=7.7e-08  Score=44.87  Aligned_cols=27  Identities=41%  Similarity=0.908  Sum_probs=22.3

Q ss_pred             CcccCc--cchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACD--ICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|+  .||+.|...+.|..|+++|++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~   29 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcC
Confidence            478887  788888888888888888876

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.45  E-value=6.2e-08  Score=44.28  Aligned_cols=27  Identities=41%  Similarity=0.707  Sum_probs=20.8

Q ss_pred             CcccCccchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ++|.|+.|++.|...+.|..|+++|++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~   27 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSG   27 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHT
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcC
Confidence            367788888888888888888877765

>1ncs_A Peptide M30F, transcriptional factor SWI5; DNA binding motif, transcription regulation, zinc-finger; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.42  E-value=5.3e-08  Score=50.37  Aligned_cols=39  Identities=13%  Similarity=0.484  Sum_probs=32.7

Q ss_pred             HhchhhcCCCCCccCc--cCCccCCChHHHHHHHHHhhCCC
Q psy9067         124 RNHMRSHTGERPYQCA--HCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       124 ~~H~~~~~~~~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      ..|...|.+++||.|.  +|++.|...+.|..|+++|++++
T Consensus         7 ~~~~~~H~~~k~~~C~~~~C~k~F~~~~~L~~H~~~H~~ek   47 (47)
T 1ncs_A            7 IDKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             GGGSCEEETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             HHHHhccCCCCCeECCCCCCCCccCCHHHHHHHHHHccCCC
Confidence            3455668899999995  79999999999999999998764

>1va1_A Transcription factor SP1; C2H2 type zinc finger, DNA-binding protein; NMR {Homo sapiens}

Probab=98.40  E-value=2.1e-07  Score=45.36  Aligned_cols=33  Identities=33%  Similarity=0.515  Sum_probs=25.5

Q ss_pred             cCCCCCccCcc--CCccCCChHHHHHHHHHhhCCC
Q psy9067         130 HTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       130 ~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      +.+++||.|.+  |++.|...+.|..|+++|++++
T Consensus         3 ~~~~k~~~C~~~~C~k~f~~~~~L~~H~~~H~~ek   37 (37)
T 1va1_A            3 PGKKKQHICHIQGCGKVYGKTSHLRAHLRWHTGER   37 (37)
T ss_dssp             SSSCCCEECCSTTCCCEESCHHHHHHHHHHHHTTC
T ss_pred             CCCCCCCCCCCCCCCCccCCHHHHHHHHHhcCCCC
Confidence            55677888874  8888888888888888887653

>3iuf_A Zinc finger protein UBI-D4; structural genomics consortium (SGC), C2H2, APO metal-binding, nucleus, phosphoprotein, transcription, TRAN regulation; 1.80A {Homo sapiens}

Probab=98.40  E-value=1.2e-07  Score=49.27  Aligned_cols=33  Identities=24%  Similarity=0.478  Sum_probs=22.0

Q ss_pred             cCCCCCccCccCCccCCChHHHHHHHH-HhhCCC
Q psy9067         130 HTGERPYQCAHCTYASPDTFKLKRHLR-IHTGEK  162 (189)
Q Consensus       130 ~~~~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~  162 (189)
                      |.+++||.|.+|++.|.....|..|++ +|+++.
T Consensus         2 Ht~~kp~~C~~C~k~F~~~~~L~~H~~~~H~~e~   35 (48)
T 3iuf_A            2 EDRDKPYACDICGKRYKNRPGLSYHYAHSHLAEE   35 (48)
T ss_dssp             CTTTSCEECTTTCCEESSHHHHHHHHHHSSCC--
T ss_pred             CCCCcCEECCCcCcccCCHHHHHHHhhhhcCCCC
Confidence            456677777777777777777777777 666544

>1ard_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1 PDB: 1arf_A 1are_A

Probab=98.40  E-value=3.1e-07  Score=41.82  Aligned_cols=28  Identities=46%  Similarity=0.714  Sum_probs=20.9

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   28 (29)
T 1ard_A            1 RSFVCEVCTRAFARQEHLKRHYRSHTNE   28 (29)
T ss_dssp             CCCBCTTTCCBCSSHHHHHHHHHHHSCC
T ss_pred             CCeECCCCCcccCCHHHHHHHHHHhcCC
Confidence            3677777777777777777777777664

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.38  E-value=1.5e-07  Score=43.31  Aligned_cols=27  Identities=41%  Similarity=0.833  Sum_probs=22.2

Q ss_pred             CcccCccchhccCCchHHHHH-HhhhCC
Q psy9067         162 KPYACDICHARFTQSNSLKSH-RLIHTP  188 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H-~~~h~~  188 (189)
                      +||.|+.||+.|.+.+.|..| +++|++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~~H~~   28 (30)
T 1paa_A            1 KAYACGLCNRAFTRRDLLIRHAQKIHSG   28 (30)
T ss_dssp             CCSBCTTTCCBCSSSHHHHHHHTTTSCC
T ss_pred             CCcCCcccCcccCChHHHHHHHHHHccC
Confidence            468888888888888888888 677765

>2m0d_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.36  E-value=2.4e-07  Score=42.52  Aligned_cols=28  Identities=36%  Similarity=0.695  Sum_probs=18.7

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +||.|.+|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~~~f~~~~~l~~H~~~h~~~   29 (30)
T 2m0d_A            2 KPYQCDYCGRSFSDPTSKMRHLETHDTD   29 (30)
T ss_dssp             CCEECTTTCCEESCHHHHHHHHHTTCCC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHHhccC
Confidence            5666777777777777777776666554

>1rik_A E6APC1 peptide; E6-binding domain, zinc finger, human papillomavirus, HPV E6 protein, de novo protein; NMR {Synthetic} SCOP: k.12.1.1 PDB: 1sp1_A 1va3_A

Probab=98.36  E-value=2.3e-07  Score=42.33  Aligned_cols=28  Identities=18%  Similarity=0.412  Sum_probs=19.3

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +||.|++|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 1rik_A            1 YKFACPECPKRFMRSDHLTLHILLHENK   28 (29)
T ss_dssp             CCEECSSSSCEESCSHHHHHHHTGGGSC
T ss_pred             CCccCCCCCchhCCHHHHHHHHHHhcCC
Confidence            3567777777777777777777776654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.36  E-value=8e-08  Score=45.27  Aligned_cols=30  Identities=10%  Similarity=0.237  Sum_probs=22.4

Q ss_pred             CccCCCCCccccchHHHHhchhhcCCCCCc
Q psy9067         107 PHKCSICDYASVELSKMRNHMRSHTGERPY  136 (189)
Q Consensus       107 ~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~  136 (189)
                      +|.|+.||+.|...+.|..|+++|.+++||
T Consensus         2 p~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            2 AFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            577777777777777777777777777665

>2m0e_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.36  E-value=4e-07  Score=41.35  Aligned_cols=29  Identities=31%  Similarity=0.597  Sum_probs=23.1

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCCC
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      +||.|++|++.|.....|..|+++|++++
T Consensus         1 k~~~C~~C~~~f~~~~~l~~H~~~h~~~~   29 (29)
T 2m0e_A            1 KEHKCPHCDKKFNQVGNLKAHLKIHIADG   29 (29)
T ss_dssp             CCCCCSSCCCCCCTTTHHHHHHHHHHSCC
T ss_pred             CCCcCCCCCcccCCHHHHHHHHHHhccCC
Confidence            47888888888888888888888887653

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=98.35  E-value=1.6e-07  Score=42.81  Aligned_cols=27  Identities=33%  Similarity=0.664  Sum_probs=22.1

Q ss_pred             CcccCc--cchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACD--ICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ++|.|+  .||+.|...+.|..|+++|++
T Consensus         1 k~~~C~~~~C~k~f~~~~~l~~H~~~H~~   29 (29)
T 2ab3_A            1 MVYVCHFENCGRSFNDRRKLNRHKKIHTG   29 (29)
T ss_dssp             CCEEECSTTTCEEESSHHHHHHHHGGGTC
T ss_pred             CCCCCcCCcCcCccCCHHHHHHHHHHhCC
Confidence            367888  888888888888888888864

>1klr_A Zinc finger Y-chromosomal protein; transcription; NMR {Synthetic} SCOP: g.37.1.1 PDB: 5znf_A 1kls_A 1xrz_A* 7znf_A

Probab=98.35  E-value=4.7e-07  Score=41.49  Aligned_cols=29  Identities=31%  Similarity=0.759  Sum_probs=21.5

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCCC
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      +||.|++|++.|...+.|..|+++|++++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~h~~~~   29 (30)
T 1klr_A            1 KTYQCQYCEFRSADSSNLKTHIKTKHSKE   29 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTSSC
T ss_pred             CCccCCCCCCccCCHHHHHHHHHHHccCC
Confidence            36777778877777777777777776654

>2m0f_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc fingers, transcription; NMR {Homo sapiens}

Probab=98.34  E-value=3.5e-07  Score=41.62  Aligned_cols=28  Identities=46%  Similarity=0.835  Sum_probs=21.5

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         1 ~~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2m0f_A            1 GPLKCRECGKQFTTSGNLKRHLRIHSGE   28 (29)
T ss_dssp             CCEECTTTSCEESCHHHHHHHHHHHHTC
T ss_pred             CCccCCCCCCccCChhHHHHHHHHhcCC
Confidence            4677888888888888888888777765

>1zfd_A SWI5; DNA binding motif, zinc finger DNA binding domain; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.31  E-value=6.2e-07  Score=41.93  Aligned_cols=28  Identities=36%  Similarity=0.663  Sum_probs=20.6

Q ss_pred             CCccCc--cCCccCCChHHHHHHHHHhhCC
Q psy9067         134 RPYQCA--HCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       134 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +||.|.  .|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~~~C~k~f~~~~~L~~H~~~H~~~   31 (32)
T 1zfd_A            2 RPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CCCcCcCCCCCCccCCHHHHHHHHHHccCC
Confidence            567777  6777777777777777777664

>1sp2_A SP1F2; zinc finger, transcription activation; NMR {Homo sapiens} SCOP: g.37.1.1 PDB: 1va2_A

Probab=98.29  E-value=5.4e-07  Score=41.84  Aligned_cols=28  Identities=43%  Similarity=0.787  Sum_probs=18.9

Q ss_pred             CCccCc--cCCccCCChHHHHHHHHHhhCC
Q psy9067         134 RPYQCA--HCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       134 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +||.|+  +|++.|...+.|..|+++|+++
T Consensus         1 kp~~C~~~~C~k~f~~~~~L~~H~~~H~~~   30 (31)
T 1sp2_A            1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGE   30 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCC
T ss_pred             CCcCCcCCCCCcccCCHhHHHHHHHHhcCC
Confidence            356665  6777777777777777766654

>2kfq_A FP1; protein, de novo protein; NMR {Synthetic}

Probab=98.26  E-value=7.5e-08  Score=45.37  Aligned_cols=31  Identities=26%  Similarity=0.410  Sum_probs=26.1

Q ss_pred             CcccCCCCCccccchhhHHHHHhhcCCCCCc
Q psy9067          34 RPHKCSVCERGFKTIASLQNHINTHTGVKPH   64 (189)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~   64 (189)
                      +||.|+.|++.|...+.|..|++.|.++++|
T Consensus         1 kp~~C~~C~k~f~~~~~L~~H~~~H~~~kp~   31 (32)
T 2kfq_A            1 YAFACPACPKRFMRSDALSKHIKTAFIVVAL   31 (32)
T ss_dssp             CCSSSSSSCTTHHHHHTTSSSTTSSSSSSSC
T ss_pred             CCCCCCCCCcccCCHHHHHHHHHHHccCCCC
Confidence            4688999999999888898898888887765

>2epp_A POZ-, at HOOK-, and zinc finger-containing protein 1; C2H2, zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.1

Probab=98.25  E-value=1.1e-06  Score=48.80  Aligned_cols=41  Identities=15%  Similarity=0.238  Sum_probs=31.2

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhhcCCCCCccCccCC
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT  142 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~  142 (189)
                      .+.++++|.|..|++.|.....|..|+++|.+.. ..+.+++
T Consensus         7 ~~~~ekpy~C~~CgK~F~~~s~L~~H~r~Htg~~-~~~~~~~   47 (66)
T 2epp_A            7 GLREAGILPCGLCGKVFTDANRLRQHEAQHGVTS-LQLGYID   47 (66)
T ss_dssp             SCCCCCCCCCTTTCCCCSCHHHHHHHHHHHTTTS-CCCCSCC
T ss_pred             CCCCccCcCCCCCCCccCCHHHHHhhhhhhCCCc-ccccccc
Confidence            3567788999999999999999999988887754 3444443

>2kvh_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=5.4e-07  Score=40.37  Aligned_cols=25  Identities=36%  Similarity=0.825  Sum_probs=16.3

Q ss_pred             CCccCccCCccCCChHHHHHHHHHh
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIH  158 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h  158 (189)
                      +||.|++|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvh_A            2 KPFSCSLCPQRSRDFSAMTKHLRTH   26 (27)
T ss_dssp             CCEECSSSSCEESSHHHHHHHHHHC
T ss_pred             cCccCCCcChhhCCHHHHHHHHHHc
Confidence            4666666666666666666666655

>2kvf_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.24  E-value=4.4e-07  Score=41.00  Aligned_cols=26  Identities=35%  Similarity=0.766  Sum_probs=16.2

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhh
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~  159 (189)
                      +||.|++|++.|.....|..|+++|+
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~   27 (28)
T 2kvf_A            2 RPYSCSVCGKRFSLKHQMETHYRVHT   27 (28)
T ss_dssp             CSEECSSSCCEESCHHHHHHHHTTSC
T ss_pred             cCccCCCCCcccCCHHHHHHHHHhcC
Confidence            45666666666666666666665553

>2lvt_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.55  E-value=1.4e-07  Score=43.16  Aligned_cols=28  Identities=43%  Similarity=0.717  Sum_probs=18.4

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +||.|++|++.|...+.|..|+++|+++
T Consensus         1 k~~~C~~C~k~f~~~~~l~~H~~~H~~~   28 (29)
T 2lvt_A            1 KPCQCVMCGKAFTQASSLIAHVRQHTGE   28 (29)
Confidence            3566777777777777777776666554

>1znf_A 31ST zinc finger from XFIN; zinc finger DNA binding domain; NMR {Xenopus laevis} SCOP: g.37.1.1

Probab=98.20  E-value=7.9e-07  Score=39.70  Aligned_cols=26  Identities=31%  Similarity=0.689  Sum_probs=14.9

Q ss_pred             CccCccCCccCCChHHHHHHHHHhhC
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~~h~~  160 (189)
                      ||.|++|++.|.....|..|+++|++
T Consensus         1 ~~~C~~C~k~f~~~~~l~~H~~~h~~   26 (27)
T 1znf_A            1 XYKCGLCERSFVEKSALSRHQRVHKN   26 (27)
T ss_dssp             -CBCSSSCCBCSSHHHHHHHGGGTCC
T ss_pred             CccCCCCCCcCCCHHHHHHHHHHcCC
Confidence            35566666666666666666655543

>2lvr_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, classical zinc finger, transcription; NMR {Homo sapiens}

Probab=97.48  E-value=2.1e-07  Score=42.78  Aligned_cols=28  Identities=54%  Similarity=1.010  Sum_probs=18.2

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +||.|++|++.|.....|..|+++|+++
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~h~~~   29 (30)
T 2lvr_A            2 KPYVCIHCQRQFADPGALQRHVRIHTGE   29 (30)
Confidence            4566666666666666666666666543

>2kvg_A Zinc finger and BTB domain-containing protein 32; protein/DNA, metal-binding, transcription; NMR {Mus musculus}

Probab=98.18  E-value=4.4e-07  Score=40.75  Aligned_cols=25  Identities=32%  Similarity=0.789  Sum_probs=14.7

Q ss_pred             CCccCccCCccCCChHHHHHHHHHh
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIH  158 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h  158 (189)
                      +||.|++|++.|...+.|..|+++|
T Consensus         2 k~~~C~~C~k~f~~~~~l~~H~~~H   26 (27)
T 2kvg_A            2 APYRCPLCRAGCPSLASMQAHMRGH   26 (27)
T ss_dssp             CTEEETTTTEEESCHHHHHHHHTTC
T ss_pred             cCcCCCCCCcccCCHHHHHHHHHhc
Confidence            4556666666666666666665544

>1paa_A Yeast transcription factor ADR1; transcription regulation; NMR {Saccharomyces cerevisiae} SCOP: g.37.1.1

Probab=98.14  E-value=1e-06  Score=40.39  Aligned_cols=27  Identities=37%  Similarity=0.661  Sum_probs=15.7

Q ss_pred             CccCccCCccCCChHHHHHH-HHHhhCC
Q psy9067         135 PYQCAHCTYASPDTFKLKRH-LRIHTGE  161 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H-~~~h~~~  161 (189)
                      ||.|+.|++.|...+.|..| +++|+++
T Consensus         2 ~~~C~~C~k~f~~~~~l~~H~~~~H~~~   29 (30)
T 1paa_A            2 AYACGLCNRAFTRRDLLIRHAQKIHSGN   29 (30)
T ss_dssp             CSBCTTTCCBCSSSHHHHHHHTTTSCCC
T ss_pred             CcCCcccCcccCChHHHHHHHHHHccCC
Confidence            45666666666666666666 4555443

>2lvu_A Zinc finger and BTB domain-containing protein 17; C2H2 zinc finger, transcription; NMR {Homo sapiens}

Probab=97.35  E-value=4.8e-07  Score=40.14  Aligned_cols=25  Identities=32%  Similarity=0.721  Sum_probs=16.2

Q ss_pred             CCccCccCCccCCChHHHHHHHHHh
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIH  158 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h  158 (189)
                      +||.|++|++.|...+.|..|+++|
T Consensus         1 kp~~C~~C~k~f~~~~~l~~H~~~H   25 (26)
T 2lvu_A            1 KPYVCERCGKRFVQSSQLANHIRHH   25 (26)
Confidence            3566666666666666666666654

>2ab3_A ZNF29; zinc finger protein, beta BETA alpha, RREIIB-TR, RNA binding protein; NMR {Escherichia coli} SCOP: k.12.1.1 PDB: 2ab7_A

Probab=97.88  E-value=5.3e-06  Score=37.45  Aligned_cols=25  Identities=44%  Similarity=0.740  Sum_probs=15.5

Q ss_pred             CccCc--cCCccCCChHHHHHHHHHhh
Q psy9067         135 PYQCA--HCTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       135 ~~~C~--~C~~~f~~~~~l~~H~~~h~  159 (189)
                      ||.|.  +|++.|...+.|..|+++|+
T Consensus         2 ~~~C~~~~C~k~f~~~~~l~~H~~~H~   28 (29)
T 2ab3_A            2 VYVCHFENCGRSFNDRRKLNRHKKIHT   28 (29)
T ss_dssp             CEEECSTTTCEEESSHHHHHHHHGGGT
T ss_pred             CCCCcCCcCcCccCCHHHHHHHHHHhC
Confidence            45666  66666666666666666554

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.84  E-value=2.5e-05  Score=42.99  Aligned_cols=47  Identities=28%  Similarity=0.498  Sum_probs=28.2

Q ss_pred             CCccCCChHHHHHHHH-HhhCCC------cccCc--cchhccCCchHHHHHHhhhC
Q psy9067         141 CTYASPDTFKLKRHLR-IHTGEK------PYACD--ICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       141 C~~~f~~~~~l~~H~~-~h~~~~------~~~C~--~C~~~f~~~~~l~~H~~~h~  187 (189)
                      |++.|.+...|..|+. .|.+.+      +|.|.  .|+..+.....|..|+++.|
T Consensus         9 C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~H   64 (64)
T 1zw8_A            9 CPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQH   64 (64)
T ss_dssp             CCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHHC
T ss_pred             CCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhccccC
Confidence            5555555555555552 444333      57775  47777776677777776654

>1zw8_A Zinc-responsive transcriptional regulator ZAP1; interacting C2H2 zinc fingers, beta-BETA-alpha, solution structure; NMR {Saccharomyces cerevisiae}

Probab=97.72  E-value=7.1e-05  Score=41.11  Aligned_cols=48  Identities=21%  Similarity=0.450  Sum_probs=38.4

Q ss_pred             CCCCccccchhhHHHHHh-hcCCCC------Ccccc--cCcccCCChhHHHhhhhhh
Q psy9067          39 SVCERGFKTIASLQNHIN-THTGVK------PHKCK--YCESRFTTSGELVRHVRYK   86 (189)
Q Consensus        39 ~~C~~~f~~~~~l~~H~~-~~~~~~------~~~C~--~C~~~f~~~~~l~~h~~~~   86 (189)
                      ..|++.|.+...|..|+. .|.+.+      +|.|.  .|++.+.....|..|++..
T Consensus         7 ~~C~~~f~~~~~l~~Hv~~~Hv~~~~~~~~~~~~C~W~~C~~~~~~~~~L~~Hir~~   63 (64)
T 1zw8_A            7 KECPESASSLFDLQRHLLKDHVSQDFKHPMEPLACNWEDCDFLGDDTASIVNHINAQ   63 (64)
T ss_dssp             TTCCCCCSSHHHHHHHHHHHSCCCCCCCSSCCEECCCSSCCCEESSHHHHHHHHHHH
T ss_pred             CCCCCcCCCHHHHHHHHHhhccCcccCCCCCCCEeeCCCCcCCCCChHHHHhhcccc
Confidence            348999999999999985 566554      68897  7999888889999998753

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=97.50  E-value=0.00013  Score=48.44  Aligned_cols=77  Identities=19%  Similarity=0.348  Sum_probs=57.8

Q ss_pred             ccC--CCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhh
Q psy9067         108 HKC--SICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLI  185 (189)
Q Consensus       108 ~~C--~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~  185 (189)
                      ..|  ..|+.... ...+..|.. .-...+..|+.|+..+ ....+..|....-..+...|+.|+..+... .|..|..+
T Consensus        83 v~C~n~GC~~~~~-~~~l~~H~~-~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~~-~l~~H~~~  158 (170)
T 3hcs_A           83 VKCPNEGCLHKME-LRHLEDHQA-HCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAFE-DKEIHDQN  158 (170)
T ss_dssp             EECCSTTCCCEEE-GGGHHHHHT-TCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEGG-GHHHHHTT
T ss_pred             cCCCCCCCCceec-HhHHHHHHh-cCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCHH-HHHhHHHh
Confidence            355  45776554 446777864 3355778999999877 566889999888888889999999888654 58999887


Q ss_pred             hCC
Q psy9067         186 HTP  188 (189)
Q Consensus       186 h~~  188 (189)
                      +.|
T Consensus       159 ~~~  161 (170)
T 3hcs_A          159 CPL  161 (170)
T ss_dssp             CCC
T ss_pred             CcC
Confidence            765

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=97.17  E-value=6.2e-05  Score=46.73  Aligned_cols=32  Identities=25%  Similarity=0.336  Sum_probs=24.5

Q ss_pred             hhhcCCCCCccCccCCccCCChHHHHHHHHHh
Q psy9067         127 MRSHTGERPYQCAHCTYASPDTFKLKRHLRIH  158 (189)
Q Consensus       127 ~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  158 (189)
                      ...+.|++||.|..|++.|.+...|..|+++.
T Consensus        42 ded~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           42 DPDLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             CSSSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cccCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            44566778888888888888888888887765

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.66  E-value=0.0018  Score=40.66  Aligned_cols=77  Identities=17%  Similarity=0.305  Sum_probs=48.7

Q ss_pred             CCCCccCCCCCccccchHHHHhch--hhcCCC-CCccC------ccCCccCCChHHHHHHHHHhhCCCcccCccchhccC
Q psy9067         104 HEKPHKCSICDYASVELSKMRNHM--RSHTGE-RPYQC------AHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFT  174 (189)
Q Consensus       104 ~~~~~~C~~C~~~~~~~~~l~~H~--~~~~~~-~~~~C------~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~  174 (189)
                      -.+++.|..|+..|.+...+..|.  +.|... +.+.+      +.-++.+....    +...+.....|.|.+|++.|+
T Consensus        29 ~~~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~~~~C~~C~~~f~  104 (127)
T 1zu1_A           29 IFSDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAP----AEISDGEDRSKCCPVCNMTFS  104 (127)
T ss_dssp             TBCSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCS----SCCSSCCCTTTEETTTTEECS
T ss_pred             cCCCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCc----cccccCCCCCeEcCCCCCEeC
Confidence            345689999999999999998887  333211 11111      01122222111    112234566799999999999


Q ss_pred             CchHHHHHHh
Q psy9067         175 QSNSLKSHRL  184 (189)
Q Consensus       175 ~~~~l~~H~~  184 (189)
                      +...|..|..
T Consensus       105 s~~~~~~H~~  114 (127)
T 1zu1_A          105 SPVVAESHYI  114 (127)
T ss_dssp             SHHHHHHHHT
T ss_pred             CHHHHHHHHC
Confidence            9999999975

>1zr9_A Zinc finger protein 593; DNA binding, structural genomics, PSI, protein structure initiative, center for eukaryotic structural genomics, CESG; NMR {Homo sapiens} SCOP: g.37.1.4

Probab=96.51  E-value=0.00047  Score=42.78  Aligned_cols=30  Identities=20%  Similarity=0.466  Sum_probs=19.9

Q ss_pred             ccCCCCCccCCCCCccccchHHHHhchhhc
Q psy9067         101 KHTHEKPHKCSICDYASVELSKMRNHMRSH  130 (189)
Q Consensus       101 ~~~~~~~~~C~~C~~~~~~~~~l~~H~~~~  130 (189)
                      .+.+.++|.|..|++.|.+...|..|.++.
T Consensus        44 d~tGekpfyC~~C~K~F~~~~~L~~H~rsK   73 (124)
T 1zr9_A           44 DLPGGGLHRCLACARYFIDSTNLKTHFRSK   73 (124)
T ss_dssp             SSGGGGCSEETTTTEECSSHHHHHHHTTCH
T ss_pred             cCCCCcceEcccCcchhCCHHHHHHHHhhh
Confidence            355666677777777777777777666554

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=96.42  E-value=0.0015  Score=32.63  Aligned_cols=23  Identities=22%  Similarity=0.291  Sum_probs=14.2

Q ss_pred             CCccCccCCccCCChHHHHHHHH
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLR  156 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~  156 (189)
                      .+|.|+.|+..|.....|+.|++
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmk   33 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMC   33 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhh
Confidence            44566666666666666666654

>1zu1_A DSRBP-ZFA, RNA binding protein ZFA; zinc finger protein, helix-loop-helix, helix-turn-helix; NMR {Xenopus laevis} SCOP: g.37.1.4 g.37.1.4

Probab=96.20  E-value=0.005  Score=38.62  Aligned_cols=51  Identities=16%  Similarity=0.307  Sum_probs=38.4

Q ss_pred             CcccCCCCCccccchhhHHHHHh--h-------------------------------cCCCCCcccccCcccCCChhHHH
Q psy9067          34 RPHKCSVCERGFKTIASLQNHIN--T-------------------------------HTGVKPHKCKYCESRFTTSGELV   80 (189)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~--~-------------------------------~~~~~~~~C~~C~~~f~~~~~l~   80 (189)
                      +++.|..|+..|.+.+.+..|..  .                               ..+...|.|..|+..|.+...+.
T Consensus        31 ~~~~C~~C~v~~~S~s~~~~H~~gkkH~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~C~~C~~~f~s~~~~~  110 (127)
T 1zu1_A           31 SDTQCKVCSAVLISESQKLAHYQSRKHANKVRRYMAINQGEDSVPAKKFKAAPAEISDGEDRSKCCPVCNMTFSSPVVAE  110 (127)
T ss_dssp             CSSEETTTTEECCSHHHHHHHHHCHHHHHHHHHHHHHTTCCCCCSCCCCSCCSSCCSSCCCTTTEETTTTEECSSHHHHH
T ss_pred             CCCcCcCCCCEeCCHHHHHHHHCcHHHHHHHHHHhcccCcccCCCCCccCCCccccccCCCCCeEcCCCCCEeCCHHHHH
Confidence            55777778777777777777762  1                               12234588999999999999999


Q ss_pred             hhhh
Q psy9067          81 RHVR   84 (189)
Q Consensus        81 ~h~~   84 (189)
                      .|..
T Consensus       111 ~H~~  114 (127)
T 1zu1_A          111 SHYI  114 (127)
T ss_dssp             HHHT
T ss_pred             HHHC
Confidence            9986

>2e72_A POGO transposable element with ZNF domain; zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=95.67  E-value=0.0084  Score=30.00  Aligned_cols=24  Identities=25%  Similarity=0.588  Sum_probs=19.4

Q ss_pred             CCcccccCcccCCChhHHHhhhhh
Q psy9067          62 KPHKCKYCESRFTTSGELVRHVRY   85 (189)
Q Consensus        62 ~~~~C~~C~~~f~~~~~l~~h~~~   85 (189)
                      .++.|+.|+..|.....|+.|++.
T Consensus        11 ~~~~CPrCn~~f~~~~sLr~Hmky   34 (49)
T 2e72_A           11 GRKICPRCNAQFRVTEALRGHMCY   34 (49)
T ss_dssp             SCCCCTTTCCCCSSHHHHHHHHHH
T ss_pred             CceeCCcccccccchHHHHhhhhh
Confidence            467888888888888888888874

>2jsp_A Transcriptional regulatory protein ROS; prokaryotic Cys2His2 zinc finger, gene regulation; NMR {Agrobacterium tumefaciens}

Probab=94.77  E-value=0.016  Score=33.39  Aligned_cols=27  Identities=33%  Similarity=0.551  Sum_probs=15.3

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCCCc
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGEKP  163 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~  163 (189)
                      +...|-+||+.|..   |..|+.++++..|
T Consensus        20 d~iiClecGK~fK~---LkRHL~~~hgltp   46 (87)
T 2jsp_A           20 DHIVCLECGGSFKS---LKRHLTTHHSMTP   46 (87)
T ss_dssp             SCEECTBTCCEESB---HHHHHHHTTCSCH
T ss_pred             CceEecccchhhHH---HHHHHHHccCCCH
Confidence            33466666666663   4466666555554

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.76  E-value=0.017  Score=26.93  Aligned_cols=25  Identities=16%  Similarity=0.333  Sum_probs=16.1

Q ss_pred             cccCccchhccCCchHHHHHHhhhC
Q psy9067         163 PYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      .|.|++|.+.|.+...|..|....|
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H   29 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVH   29 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhcc
Confidence            4667777777777777777755433

>3hcs_A TNF receptor-associated factor 6; cross-brace, beta-BETA-alpha, coiled coil, cytoplasm, metal- binding, UBL conjugation, UBL conjugation pathway; 2.20A {Homo sapiens}

Probab=94.73  E-value=0.064  Score=35.25  Aligned_cols=77  Identities=17%  Similarity=0.224  Sum_probs=55.6

Q ss_pred             eEEeeeC--CCcceeeechhHHHHHHhhCCCCCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHh
Q psy9067           4 TIYYWSD--TTGYLRYHVMYLLARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVR   81 (189)
Q Consensus         4 ~~~~~c~--~c~~~~f~~~~~l~~h~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~   81 (189)
                      .+.+.|.  .|..  ......+..|. ..-.-.+..|+.|+..+ ....|..|....-..+...|..|+..+.. .+|..
T Consensus        80 ~l~v~C~n~GC~~--~~~~~~l~~H~-~~C~~~~v~C~~C~~~~-~r~~l~~H~~~~C~~r~~~C~~C~~~~~~-~~l~~  154 (170)
T 3hcs_A           80 SLMVKCPNEGCLH--KMELRHLEDHQ-AHCEFALMDCPQCQRPF-QKFHINIHILKDCPRRQVSCDNCAASMAF-EDKEI  154 (170)
T ss_dssp             TSEEECCSTTCCC--EEEGGGHHHHH-TTCTTSEEECTTTCCEE-EGGGHHHHHHHTCTTCEEECTTTCCEEEG-GGHHH
T ss_pred             hcccCCCCCCCCc--eecHhHHHHHH-hcCCceeeECCCCChHH-HHHHHHHHhhhhCCCCCeECCCCCCccCH-HHHHh
Confidence            3456673  4553  33466788887 44556678899999887 56788999887777788899999987754 55788


Q ss_pred             hhhh
Q psy9067          82 HVRY   85 (189)
Q Consensus        82 h~~~   85 (189)
                      |...
T Consensus       155 H~~~  158 (170)
T 3hcs_A          155 HDQN  158 (170)
T ss_dssp             HHTT
T ss_pred             HHHh
Confidence            8764

>3mjh_B Early endosome antigen 1; protein-zinc finger complex, beta BETA alpha fold, beta HAIR RAB5A GTPase, EEA1, protein transport; HET: GTP; 2.03A {Homo sapiens}

Probab=94.15  E-value=0.04  Score=25.69  Aligned_cols=26  Identities=15%  Similarity=0.354  Sum_probs=20.3

Q ss_pred             cccCCCCCccccchhhHHHHHhhcCC
Q psy9067          35 PHKCSVCERGFKTIASLQNHINTHTG   60 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (189)
                      .|.|+.|.+.+.+...|..|....+.
T Consensus         5 GFiCP~C~~~l~s~~~L~~Hye~~H~   30 (34)
T 3mjh_B            5 GFICPQCMKSLGSADELFKHYEAVHD   30 (34)
T ss_dssp             EEECTTTCCEESSHHHHHHHHHHHTS
T ss_pred             ccCCcHHHHHcCCHHHHHHHHHhccc
Confidence            37888888888888888888876554

>2elu_A Zinc finger protein 406; ZFAT zinc finger 1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} PDB: 2elw_A

Probab=93.28  E-value=0.068  Score=24.14  Aligned_cols=25  Identities=24%  Similarity=0.911  Sum_probs=16.4

Q ss_pred             cccccCcccCCChhHHHhhhhhhcC
Q psy9067          64 HKCKYCESRFTTSGELVRHVRYKHT   88 (189)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~h~~~~h~   88 (189)
                      -.|.+|.+.+.+-.+|..|++..|.
T Consensus        10 qhcrfckkkysdvknlikhire~hd   34 (37)
T 2elu_A           10 QHCRFCKKKYSDVKNLIKHIRDAHD   34 (37)
T ss_dssp             CEETTTTEECSSHHHHHHHHHHTTC
T ss_pred             HHHHHHHHHHHHHHHHHHHHHHhcC
Confidence            3577777777777777777765443

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=91.33  E-value=0.12  Score=24.25  Aligned_cols=23  Identities=17%  Similarity=0.424  Sum_probs=15.7

Q ss_pred             CcccCccchhccCCchHHHHHHh
Q psy9067         162 KPYACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~  184 (189)
                      ..+.|..|+.+|+...++..|++
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            45667777777777777777765

>2k5c_A Uncharacterized protein PF0385; structural genomics, PSI-2, protein structure initiative, northeast structural genomics consortium, NESG; NMR {Pyrococcus furiosus}

Probab=90.01  E-value=0.078  Score=29.74  Aligned_cols=17  Identities=24%  Similarity=0.362  Sum_probs=12.0

Q ss_pred             ccCCCCCccccchHHHH
Q psy9067         108 HKCSICDYASVELSKMR  124 (189)
Q Consensus       108 ~~C~~C~~~~~~~~~l~  124 (189)
                      -.||.||+........-
T Consensus         9 ~~~PlCG~~L~W~eLIe   25 (95)
T 2k5c_A            9 AKCPICGSPLKWEELIE   25 (95)
T ss_dssp             EECSSSCCEECHHHHHH
T ss_pred             ccCCcCCCccCHHHHHH
Confidence            47999998876654433

>4ayb_P DNA-directed RNA polymerase; transferase, multi-subunit, transcription; 3.20A {Sulfolobus shibatae} PDB: 2pmz_P 2wb1_P 2y0s_P 3hkz_P 2waq_P 4b1o_P 4b1p_X

Probab=89.76  E-value=0.26  Score=24.56  Aligned_cols=14  Identities=29%  Similarity=0.567  Sum_probs=10.2

Q ss_pred             CcccccCcccCCCh
Q psy9067          63 PHKCKYCESRFTTS   76 (189)
Q Consensus        63 ~~~C~~C~~~f~~~   76 (189)
                      .|.|..|++.|...
T Consensus         3 iY~C~rCg~~fs~~   16 (48)
T 4ayb_P            3 VYRCGKCWKTFTDE   16 (48)
T ss_dssp             --CCCCTTTTCCCC
T ss_pred             EEEeeccCCCccHH
Confidence            47899999998764

>1fu9_A U-shaped transcriptional cofactor; zinc-finger, beta-hairpin + alpha-helix; NMR {Drosophila melanogaster} SCOP: g.37.1.2 PDB: 1jn7_A

Probab=88.27  E-value=0.76  Score=21.50  Aligned_cols=23  Identities=22%  Similarity=0.507  Sum_probs=13.2

Q ss_pred             CcccCCCCCccccchhhHHHHHh
Q psy9067          34 RPHKCSVCERGFKTIASLQNHIN   56 (189)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~   56 (189)
                      ..+.|..|+..|..-..+..|..
T Consensus         7 ~~~~C~~C~IsF~~l~ty~aHKk   29 (36)
T 1fu9_A            7 MKKYCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             CCSEETTTTEECSSHHHHHHHHH
T ss_pred             CcCeeccccceehhhHHHhhhhe
Confidence            34556666666665555555554

>2gmg_A Hypothetical protein PF0610; winged-helix like protein with metal binding site, structura genomics, PSI, protein structure initiative; NMR {Pyrococcus furiosus} SCOP: a.4.5.82

Probab=85.43  E-value=0.7  Score=27.53  Aligned_cols=29  Identities=31%  Similarity=0.725  Sum_probs=21.4

Q ss_pred             CcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccC
Q psy9067          34 RPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRF   73 (189)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f   73 (189)
                      .++.|..||..|.           ....+|-.|+.|+...
T Consensus        66 ~p~~C~~CG~~F~-----------~~~~kPsrCP~CkSe~   94 (105)
T 2gmg_A           66 KPAQCRKCGFVFK-----------AEINIPSRCPKCKSEW   94 (105)
T ss_dssp             CCCBBTTTCCBCC-----------CCSSCCSSCSSSCCCC
T ss_pred             ECcChhhCcCeec-----------ccCCCCCCCcCCCCCc
Confidence            5788999999981           2345678899997654

>6rxn_A Rubredoxin; electron transfer(iron-sulfur protein); 1.50A {Desulfovibrio desulfuricans} SCOP: g.41.5.1

Probab=85.36  E-value=0.41  Score=23.96  Aligned_cols=12  Identities=25%  Similarity=0.711  Sum_probs=8.3

Q ss_pred             CccCCCCCcccc
Q psy9067         107 PHKCSICDYASV  118 (189)
Q Consensus       107 ~~~C~~C~~~~~  118 (189)
                      .|+|..||..+.
T Consensus         4 ~y~C~vCGyvyd   15 (46)
T 6rxn_A            4 KYVCNVCGYEYD   15 (46)
T ss_dssp             CEEETTTCCEEC
T ss_pred             EEECCCCCeEEe
Confidence            467777777664

>2jvx_A NF-kappa-B essential modulator; CCHC classical zinc finger, NEMO zinc finger, beta-BETA- alpha fold, coiled coil, cytoplasm, disease mutation; NMR {Synthetic} PDB: 2jvy_A

Probab=84.57  E-value=0.88  Score=20.07  Aligned_cols=23  Identities=22%  Similarity=0.414  Sum_probs=16.2

Q ss_pred             cccCCCCCccccchhhHHHHHhh
Q psy9067          35 PHKCSVCERGFKTIASLQNHINT   57 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~   57 (189)
                      .+.|+.|.....+...|..|...
T Consensus         3 k~~CpvCk~q~Pd~kt~~~H~e~   25 (28)
T 2jvx_A            3 DFCCPKCQYQAPDMDTLQIHVME   25 (28)
T ss_dssp             CEECTTSSCEESSHHHHHHHHHH
T ss_pred             cccCccccccCcChHHHHHHHHH
Confidence            36677777777777777777653

>2yuc_A TNF receptor-associated factor 4; ZF-TRAF, cysteine-rich domain associated with ring and TRAF domains protein 1, malignant 62; NMR {Homo sapiens}

Probab=84.45  E-value=0.062  Score=30.11  Aligned_cols=47  Identities=15%  Similarity=0.352  Sum_probs=27.2

Q ss_pred             CccC-CCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHH
Q psy9067         107 PHKC-SICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHL  155 (189)
Q Consensus       107 ~~~C-~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~  155 (189)
                      +..| ..|+..+. +..|..|....-..++..|..|+..+... .+..|.
T Consensus        16 ~v~C~~~C~~~v~-r~~l~~H~~~~C~~r~v~C~~C~~~~~~~-~l~~H~   63 (76)
T 2yuc_A           16 VIPCPNRCPMKLS-RRDLPAHLQHDCPKRRLKCEFCGCDFSGE-AYESHE   63 (76)
T ss_dssp             CCBCTTCCSCBCC-SSSSTTTTTTSCTTSCCCCSSSCCCCCHH-HHHHTT
T ss_pred             ccCCCccccHHhh-HhHHHhhCHhhCCCcceECCCCCCccCHH-HHHHHH
Confidence            3456 36776554 34556666644555667777777766543 444443

>2djr_A Zinc finger BED domain-containing protein 2; C2H2 type zinc finger domain, structural genomics, NPPSFA; NMR {Homo sapiens}

Probab=83.88  E-value=0.38  Score=26.97  Aligned_cols=12  Identities=17%  Similarity=-0.008  Sum_probs=7.6

Q ss_pred             hHHHHHHhhhCC
Q psy9067         177 NSLKSHRLIHTP  188 (189)
Q Consensus       177 ~~l~~H~~~h~~  188 (189)
                      ++|.+|++..|+
T Consensus        49 S~L~rHL~~~H~   60 (76)
T 2djr_A           49 TALWKHLKSMHR   60 (76)
T ss_dssp             CHHHHHHHHTTH
T ss_pred             HHHHHHHHHHCH
Confidence            457777766654

>2yrk_A Zinc finger homeobox protein 4; structure genomics, ZF-C2H2 domain, ZFH-4, structural genomics, NPPSFA; NMR {Mus musculus} SCOP: g.37.1.4

Probab=83.56  E-value=0.5  Score=24.32  Aligned_cols=21  Identities=19%  Similarity=0.653  Sum_probs=16.3

Q ss_pred             ccCccchhccCCchHHHHHHh
Q psy9067         164 YACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~  184 (189)
                      -.|.+|+..|+.+..|..|+-
T Consensus        14 ~eC~lC~vkYs~r~slqDHIF   34 (55)
T 2yrk_A           14 PECTLCGVKYSARLSIRDHIF   34 (55)
T ss_dssp             SCCTTTTCCCCSSSCHHHHHT
T ss_pred             ccccccCcccccccchhhhhc
Confidence            478888888888887877764

>3vk6_A E3 ubiquitin-protein ligase hakai; HYB, phosphotyrosine binding domain; 1.90A {Mus musculus}

Probab=83.42  E-value=0.84  Score=26.97  Aligned_cols=48  Identities=19%  Similarity=0.427  Sum_probs=35.1

Q ss_pred             ccCCCCCccccchhhHHHHHhhcCCCCCcccc---cCcccCCChhHHHhhhhhhcCCC
Q psy9067          36 HKCSVCERGFKTIASLQNHINTHTGVKPHKCK---YCESRFTTSGELVRHVRYKHTHE   90 (189)
Q Consensus        36 ~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~---~C~~~f~~~~~l~~h~~~~h~~~   90 (189)
                      ..|+.|...+.....       ...+..|.|.   .|.++|.+..+|+.|+...|...
T Consensus        38 k~Cp~C~~~V~rVe~-------~~~~~if~C~~~~~CkrtyLs~rdlqaHI~~~H~~~   88 (101)
T 3vk6_A           38 KMCPGCSDPVQRIEQ-------CTRGSLFMCSIVQGCKRTYLSQRDLQAHINHRHMRA   88 (101)
T ss_dssp             CBCTTTCCBCSEEEE-------EEGGGCCCCCCCCCCCCCCSSHHHHHHHHHHHTTTS
T ss_pred             CCCcCcCCeeeeeEE-------eccCCEEECCCCCCHHHHhcCHHHHHHHHHHHhhhc
Confidence            368888877644222       2235568887   59999999999999999766544

>1wjv_A Cell growth regulating nucleolar protein LYAR; DNA-binding protein, C2H2 type zinc-finger, structural genomics; NMR {Mus musculus} SCOP: g.37.1.2 g.37.1.2

Probab=83.12  E-value=0.63  Score=26.13  Aligned_cols=47  Identities=17%  Similarity=0.393  Sum_probs=27.6

Q ss_pred             CcccCCCCCccccchhhHHHHHhhcCCCCCcccccCcccCCChhHHHhh
Q psy9067          34 RPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRH   82 (189)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~h   82 (189)
                      ..|.|..||..+. +..+..|...-.+...|.|..|+..|.. ..++.|
T Consensus         9 V~F~C~~Cgd~lK-K~kv~~H~~~Cr~~~~~SCIDC~~~F~~-~~y~~H   55 (79)
T 1wjv_A            9 VFFTCNACGESVK-KIQVEKHVSNCRNCECLSCIDCGKDFWG-DDYKSH   55 (79)
T ss_dssp             CEEEESSSCCEEE-TTHHHHHHHHCTTCCEEEETTTTEEEEG-GGTTTC
T ss_pred             eEEEcCCCCCeee-cccchhHHhhCCCCCcEEecccCCeeCC-CCEeCE
Confidence            3466777776653 3456666555444455777777777764 334444

>1yuz_A Nigerythrin; rubrythrin, rubredoxin, hemerythrin, electron transfer, DIIR center, oxidoreductase; 1.40A {Desulfovibrio vulgaris subsp} SCOP: a.25.1.1 g.41.5.1 PDB: 1yv1_A 1yux_A

Probab=83.01  E-value=0.51  Score=31.97  Aligned_cols=13  Identities=46%  Similarity=0.920  Sum_probs=7.7

Q ss_pred             CCccCCCCCcccc
Q psy9067         106 KPHKCSICDYASV  118 (189)
Q Consensus       106 ~~~~C~~C~~~~~  118 (189)
                      ..|+|+.||..+.
T Consensus       170 ~~~~C~~CG~i~~  182 (202)
T 1yuz_A          170 KFHLCPICGYIHK  182 (202)
T ss_dssp             CEEECSSSCCEEE
T ss_pred             cEEEECCCCCEEc
Confidence            3466777766543

>2k9h_A Glycoprotein; hantavirus, zinc finger, CCHC, metal binding protein; NMR {Andes virus}

Probab=82.68  E-value=2.2  Score=21.95  Aligned_cols=46  Identities=20%  Similarity=0.442  Sum_probs=26.5

Q ss_pred             ccCCCCCccccchHHHHhchhhcCCCCCccCccCC-ccCCChHHHHHHHH
Q psy9067         108 HKCSICDYASVELSKMRNHMRSHTGERPYQCAHCT-YASPDTFKLKRHLR  156 (189)
Q Consensus       108 ~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~-~~f~~~~~l~~H~~  156 (189)
                      ..|++|.........|..|.......   +||.|- ..-.+.+.|+.|.+
T Consensus         4 mvC~~C~~ECET~kEl~~H~~sCp~g---qCPYC~~~~e~tesAlQaHfk   50 (57)
T 2k9h_A            4 MVCDVCHHECETAKELESHRQSCING---QCPYCMTITEATESALQAHYS   50 (57)
T ss_dssp             TBCTTTCCBCSSTTTHHHHHHHHTTT---BCTTTCCBCCSSHHHHHHHHT
T ss_pred             chhhHHHhhhhhHHHHHHHhccCCCC---CCCcccCcCCcCHHHHHHHHH
Confidence            36777776666667777776665332   455553 23345556666643

>2ct5_A Zinc finger BED domain containing protein 1; DREF homolog, putative C-like transposable element, structural genomics, NPPSFA; NMR {Homo sapiens} SCOP: g.37.1.6

Probab=81.74  E-value=0.5  Score=26.28  Aligned_cols=24  Identities=29%  Similarity=0.588  Sum_probs=14.7

Q ss_pred             cCccchhccC---CchHHHHHHhhhCC
Q psy9067         165 ACDICHARFT---QSNSLKSHRLIHTP  188 (189)
Q Consensus       165 ~C~~C~~~f~---~~~~l~~H~~~h~~  188 (189)
                      .|.+|++.++   .-++|.+|++.+||
T Consensus        31 ~Ck~C~~~l~~~g~TSnL~rHL~~~H~   57 (73)
T 2ct5_A           31 YCRICMAQIAYSGNTSNLSYHLEKNHP   57 (73)
T ss_dssp             EETTTTEECCCCSSTHHHHHHHHHSCH
T ss_pred             ECCCCCccccCCCChHhHHHHHHHHCH
Confidence            4555554433   34668888887775

>1wir_A Protein arginine N-methyltransferase 3; C2H2 zinc finger domain, PRMT3, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: g.37.1.5

Probab=81.22  E-value=1.2  Score=27.50  Aligned_cols=26  Identities=12%  Similarity=0.235  Sum_probs=14.4

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhh
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~  159 (189)
                      .+..|-.|...|.+...+..|++..+
T Consensus        14 ~~~~CLFCd~~~~s~~~~l~H~k~~H   39 (121)
T 1wir_A           14 QHTPCLFCDRLFASAEETFSHCKLEH   39 (121)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHSS
T ss_pred             CceeEecCCCcccCHHHHHHHHHHhc
Confidence            34555555555555555555555443

---

Homologous Structure Domains

Structure Domains Detected by RPS-BLAST

Original result of RPS-BLAST against SCOP70(version1.75) database

ID	Length	Definition	E-value
Query	189
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	9e-08
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	1e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	5e-06
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	3e-04
d1x6ea1	33	g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (H	4e-04
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-07
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	1e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	3e-06
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	2e-05
d2epsa1	39	g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [	9e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-07
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	2e-06
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	1e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	9e-04
d2cota2	38	g.37.1.1 (A:7-44) Zinc finger and SCAN domain-cont	0.002
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-07
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-05
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	2e-04
d2ct1a2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	0.001
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	4e-07
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	1e-05
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	3e-04
d1x6ha2	36	g.37.1.1 (A:8-43) Transcriptional repressor CTCF {	5e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-06
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	1e-04
d1p7aa_	37	g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (	0.003
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-05
d1srka_	35	g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {M	2e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	2e-04
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.001
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.002
d1a1ia2	28	g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus)	0.002
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	2e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	6e-04
d2csha1	53	g.37.1.1 (A:8-60) Zinc finger protein 297b {Human	9e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	3e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	4e-04
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.001
d2adra1	29	g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Sac	0.004
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	4e-04
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.001
d2dlka2	36	g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692	0.001
d2dmda3	29	g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {	9e-04
d2dmda3	29	g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {	0.002
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.001
d1sp1a_	29	g.37.1.1 (A:) Transcription factor sp1 {Human (Hom	0.002
d1ncsa_	47	g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's ye	0.002

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 44.1 bits (105), Expect = 9e-08
 Identities = 15/31 (48%), Positives = 21/31 (67%)

Query: 157 IHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           IH+GEKPY C  C   F++S+ L  H+ +HT
Sbjct: 1   IHSGEKPYGCVECGKAFSRSSILVQHQRVHT 31

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 1e-06
 Identities = 15/32 (46%), Positives = 20/32 (62%)

Query: 130 HTGERPYQCAHCTYASPDTFKLKRHLRIHTGE 161
           H+GE+PY C  C  A   +  L +H R+HTGE
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 39.5 bits (93), Expect = 5e-06
 Identities = 14/32 (43%), Positives = 17/32 (53%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE 133
           H+ EKP+ C  C  A    S +  H R HTGE
Sbjct: 2   HSGEKPYGCVECGKAFSRSSILVQHQRVHTGE 33

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.9 bits (81), Expect = 3e-04
 Identities = 12/31 (38%), Positives = 16/31 (51%)

Query: 30 HSEERPHKCSVCERGFKTIASLQNHINTHTG 60
          HS E+P+ C  C + F   + L  H   HTG
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQRVHTG 32

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]} Length = 33

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.5 bits (80), Expect = 4e-04
 Identities = 15/33 (45%), Positives = 19/33 (57%), Gaps = 1/33 (3%)

Query: 58 HTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 90
          H+G KP+ C  C   F+ S  LV+H R  HT E
Sbjct: 2  HSGEKPYGCVECGKAFSRSSILVQHQR-VHTGE 33

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.8 bits (104), Expect = 2e-07
 Identities = 11/39 (28%), Positives = 19/39 (48%), Gaps = 1/39 (2%)

Query: 131 TGERPYQCAHCTYASPDTFKLKRHLR-IHTGEKPYACDI 168
           +  +PY C  C         L  H++ +HT E+P+ C +
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV 39

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 41.5 bits (98), Expect = 1e-06
 Identities = 11/37 (29%), Positives = 18/37 (48%), Gaps = 1/37 (2%)

Query: 103 THEKPHKCSICDYASVELSKMRNHMRS-HTGERPYQC 138
           +  KP+ C  C         +  H++  HT ERP++C
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKC 37

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.4 bits (95), Expect = 3e-06
 Identities = 15/38 (39%), Positives = 20/38 (52%), Gaps = 1/38 (2%)

Query: 31 SEERPHKCSVCERGFKTIASLQNHI-NTHTGVKPHKCK 67
          S  +P+ C  C +GF     L  HI   HT  +PHKC+
Sbjct: 1  SVGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQ 38

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.4 bits (90), Expect = 2e-05
 Identities = 11/31 (35%), Positives = 17/31 (54%)

Query: 62 KPHKCKYCESRFTTSGELVRHVRYKHTHEKP 92
          KP+ C+ C   F+    L  H++  HT E+P
Sbjct: 4  KPYICQSCGKGFSRPDHLNGHIKQVHTSERP 34

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]} Length = 39

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.4 bits (77), Expect = 9e-04
 Identities = 10/30 (33%), Positives = 16/30 (53%), Gaps = 1/30 (3%)

Query: 159 TGEKPYACDICHARFTQSNSLKSH-RLIHT 187
           +  KPY C  C   F++ + L  H + +HT
Sbjct: 1   SVGKPYICQSCGKGFSRPDHLNGHIKQVHT 30

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 43.2 bits (102), Expect = 2e-07
 Identities = 12/35 (34%), Positives = 15/35 (42%)

Query: 153 RHLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           R        + Y CD C   F+ S+ L  HR  HT
Sbjct: 2   RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHT 36

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 40.9 bits (96), Expect = 2e-06
 Identities = 11/36 (30%), Positives = 15/36 (41%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE 161
                   R Y+C  C  +   +  L +H R HTGE
Sbjct: 3   SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.9 bits (83), Expect = 1e-04
 Identities = 13/37 (35%), Positives = 16/37 (43%)

Query: 24 ARHLKSHSEERPHKCSVCERGFKTIASLQNHINTHTG 60
           R      E R +KC  C + F   + L  H  THTG
Sbjct: 1  GRSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG 37

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.6 bits (77), Expect = 9e-04
 Identities = 11/38 (28%), Positives = 17/38 (44%), Gaps = 1/38 (2%)

Query: 96  RHVRYKHTHEKPHKCSICDYASVELSKMRNHMRSHTGE 133
           R    +    + +KC  C  +    S +  H R+HTGE
Sbjct: 2   RSEW-QQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE 38

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]} Length = 38

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.4 bits (74), Expect = 0.002
 Identities = 11/37 (29%), Positives = 16/37 (43%), Gaps = 1/37 (2%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 90
                  + +KC  C   F+ S +L +H R  HT E
Sbjct: 3  SEWQQRERRRYKCDECGKSFSHSSDLSKHRR-THTGE 38

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.7 bits (101), Expect = 4e-07
 Identities = 20/32 (62%), Positives = 23/32 (71%)

Query: 156 RIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           R H+GEKPY C ICHARFTQS ++K H L   
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKH 32

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.8 bits (91), Expect = 1e-05
 Identities = 16/34 (47%), Positives = 22/34 (64%)

Query: 57 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHE 90
          TH+G KP++C  C +RFT SG +  H+  KHT  
Sbjct: 2  THSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.7 bits (83), Expect = 2e-04
 Identities = 13/35 (37%), Positives = 20/35 (57%), Gaps = 1/35 (2%)

Query: 128 RSHTGERPYQCAHCTYASPDTFKLKRH-LRIHTGE 161
           R+H+GE+PY+C  C      +  +K H L+ HT  
Sbjct: 1   RTHSGEKPYECYICHARFTQSGTMKMHILQKHTEN 35

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.0 bits (76), Expect = 0.001
 Identities = 10/32 (31%), Positives = 16/32 (50%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE 133
           H+ EKP++C IC     +   M+ H+     E
Sbjct: 3   HSGEKPYECYICHARFTQSGTMKMHILQKHTE 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 42.4 bits (100), Expect = 4e-07
 Identities = 15/32 (46%), Positives = 16/32 (50%)

Query: 156 RIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
           R HTGEKPYAC  C   F Q   L  H   + 
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYH 32

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 38.9 bits (91), Expect = 1e-05
 Identities = 12/35 (34%), Positives = 17/35 (48%)

Query: 128 RSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           R+HTGE+PY C+HC         L  H + +    
Sbjct: 1   RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDPN 35

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.6 bits (80), Expect = 3e-04
 Identities = 10/32 (31%), Positives = 15/32 (46%)

Query: 102 HTHEKPHKCSICDYASVELSKMRNHMRSHTGE 133
           HT EKP+ CS CD    +   +  H + +   
Sbjct: 3   HTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP 34

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.3 bits (79), Expect = 5e-04
 Identities = 11/35 (31%), Positives = 17/35 (48%), Gaps = 1/35 (2%)

Query: 57 THTGVKPHKCKYCESRFTTSGELVRHVRYKHTHEK 91
          THTG KP+ C +C+  F     L  H + ++    
Sbjct: 2  THTGEKPYACSHCDKTFRQKQLLDMHFK-RYHDPN 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 41.3 bits (97), Expect = 1e-06
 Identities = 13/34 (38%), Positives = 17/34 (50%)

Query: 154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHT 187
             R  TG KP+ C  C   F++S+ L  HR  H 
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHM 35

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 36.2 bits (84), Expect = 1e-04
 Identities = 10/35 (28%), Positives = 15/35 (42%)

Query: 126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTG 160
             R  TG +P+QC  C  +   +  L  H + H  
Sbjct: 2   STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML 36

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]} Length = 37

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.0 bits (73), Expect = 0.003
 Identities = 10/31 (32%), Positives = 15/31 (48%)

Query: 54 HINTHTGVKPHKCKYCESRFTTSGELVRHVR 84
               TG+KP +C  C+  F+ S  L  H +
Sbjct: 2  STRGSTGIKPFQCPDCDRSFSRSDHLALHRK 32

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 38.2 bits (89), Expect = 2e-05
 Identities = 10/30 (33%), Positives = 17/30 (56%)

Query: 158 HTGEKPYACDICHARFTQSNSLKSHRLIHT 187
            +G++P+ C IC + FT   +   H  +HT
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHT 31

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]} Length = 35

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.5 bits (82), Expect = 2e-04
 Identities = 11/32 (34%), Positives = 16/32 (50%)

Query: 130 HTGERPYQCAHCTYASPDTFKLKRHLRIHTGE 161
            +G+RP+ C  C  A        RHL++HT  
Sbjct: 2   SSGKRPFVCRICLSAFTTKANCARHLKVHTDT 33

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 35.3 bits (82), Expect = 2e-04
 Identities = 11/27 (40%), Positives = 17/27 (62%)

Query: 161 EKPYACDICHARFTQSNSLKSHRLIHT 187
           +KP+ C IC   F++S+ L +H   HT
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHT 27

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 33.0 bits (76), Expect = 0.001
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 105 EKPHKCSICDYASVELSKMRNHMRSHTG 132
           +KP +C IC         +  H+R+HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.2 bits (74), Expect = 0.002
 Identities = 10/28 (35%), Positives = 15/28 (53%)

Query: 133 ERPYQCAHCTYASPDTFKLKRHLRIHTG 160
           ++P+QC  C      +  L  H+R HTG
Sbjct: 1   QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]} Length = 28

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

 Score = 32.2 bits (74), Expect = 0.002
 Identities = 12/28 (42%), Positives = 16/28 (57%)

Query: 33 ERPHKCSVCERGFKTIASLQNHINTHTG 60
          ++P +C +C R F     L  HI THTG
Sbjct: 1  QKPFQCRICMRNFSRSDHLTTHIRTHTG 28

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 35.4 bits (81), Expect = 2e-04
 Identities = 16/54 (29%), Positives = 26/54 (48%), Gaps = 1/54 (1%)

Query: 133 ERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIH 186
           ++ Y C  C  +     +  RH+ +H G +PY C +C  +F   + L  H  IH
Sbjct: 1   DKLYPC-QCGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (79), Expect = 6e-04
 Identities = 13/52 (25%), Positives = 26/52 (50%), Gaps = 1/52 (1%)

Query: 33 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRFTTSGELVRHVR 84
          ++ + C  C + F   +    H++ H G++P+ C  C  +F     LV H++
Sbjct: 1  DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMK 51

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]} Length = 53

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.9 bits (77), Expect = 9e-04
 Identities = 17/54 (31%), Positives = 23/54 (42%), Gaps = 1/54 (1%)

Query: 105 EKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIH 158
           +K + C  C  +    S+   HM  H G RPY C  C         L  H++IH
Sbjct: 1   DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH 53

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.5 bits (80), Expect = 3e-04
 Identities = 14/29 (48%), Positives = 15/29 (51%)

Query: 134 RPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           R + C  CT A      LKRH R HT EK
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 34.5 bits (80), Expect = 4e-04
 Identities = 9/29 (31%), Positives = 14/29 (48%)

Query: 106 KPHKCSICDYASVELSKMRNHMRSHTGER 134
           +   C +C  A      ++ H RSHT E+
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 33.0 bits (76), Expect = 0.001
 Identities = 8/26 (30%), Positives = 13/26 (50%)

Query: 162 KPYACDICHARFTQSNSLKSHRLIHT 187
           + + C++C   F +   LK H   HT
Sbjct: 1   RSFVCEVCTRAFARQEHLKRHYRSHT 26

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

 Score = 31.4 bits (72), Expect = 0.004
 Identities = 11/29 (37%), Positives = 13/29 (44%)

Query: 34 RPHKCSVCERGFKTIASLQNHINTHTGVK 62
          R   C VC R F     L+ H  +HT  K
Sbjct: 1  RSFVCEVCTRAFARQEHLKRHYRSHTNEK 29

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 34.7 bits (80), Expect = 4e-04
 Identities = 8/34 (23%), Positives = 16/34 (47%), Gaps = 2/34 (5%)

Query: 136 YQCAH--CTYASPDTFKLKRHLRIHTGEKPYACD 167
           + C    C  +      LK H+++H+  + Y C+
Sbjct: 2   FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE 35

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (77), Expect = 0.001
 Identities = 6/32 (18%), Positives = 14/32 (43%)

Query: 37 KCSVCERGFKTIASLQNHINTHTGVKPHKCKY 68
              C + F     L+ H+  H+  + + C++
Sbjct: 5  PEPACGKSFNFKKHLKEHMKLHSDTRDYICEF 36

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]} Length = 36

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.2 bits (76), Expect = 0.001
 Identities = 7/30 (23%), Positives = 12/30 (40%)

Query: 109 KCSICDYASVELSKMRNHMRSHTGERPYQC 138
               C  +      ++ HM+ H+  R Y C
Sbjct: 5   PEPACGKSFNFKKHLKEHMKLHSDTRDYIC 34

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.5 bits (76), Expect = 9e-04
 Identities = 15/29 (51%), Positives = 21/29 (72%)

Query: 133 ERPYQCAHCTYASPDTFKLKRHLRIHTGE 161
           ERP++C  C YAS ++ +L  HLR HTG+
Sbjct: 1   ERPFKCQICPYASRNSSQLTVHLRSHTGD 29

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.3 bits (73), Expect = 0.002
 Identities = 16/29 (55%), Positives = 21/29 (72%)

Query: 105 EKPHKCSICDYASVELSKMRNHMRSHTGE 133
           E+P KC IC YAS   S++  H+RSHTG+
Sbjct: 1   ERPFKCQICPYASRNSSQLTVHLRSHTGD 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 33.1 bits (76), Expect = 0.001
 Identities = 5/29 (17%), Positives = 12/29 (41%)

Query: 106 KPHKCSICDYASVELSKMRNHMRSHTGER 134
           K   C  C    +    +  H+++H  ++
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 32.7 bits (75), Expect = 0.001
 Identities = 6/29 (20%), Positives = 13/29 (44%)

Query: 134 RPYQCAHCTYASPDTFKLKRHLRIHTGEK 162
           + + C  C      +  L +H++ H  +K
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQNKK 29

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]} Length = 29

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

 Score = 31.9 bits (73), Expect = 0.002
 Identities = 10/26 (38%), Positives = 13/26 (50%)

Query: 162 KPYACDICHARFTQSNSLKSHRLIHT 187
           K +AC  C  RF +S+ L  H   H 
Sbjct: 1   KKFACPECPKRFMRSDHLSKHIKTHQ 26

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]} Length = 47

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

 Score = 32.6 bits (74), Expect = 0.002
 Identities = 3/40 (7%), Positives = 15/40 (37%), Gaps = 2/40 (5%)

Query: 125 NHMRSHTGERPYQCAHCT--YASPDTFKLKRHLRIHTGEK 162
           +       ++ ++C            + ++ H++ H  ++
Sbjct: 8   DKYVKEMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR 47

Homologous Domains Detected by HHsearch

Original result of HHsearch against SCOP70(version1.75) database

ID	Length	Definition	Probability
Query	189
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.77
d2csha1	53	Zinc finger protein 297b {Human (Homo sapiens) [Ta	99.64
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.45
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.43
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.42
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.38
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.36
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.33
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.31
d2cota2	38	Zinc finger and SCAN domain-containing protein 16,	99.3
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.3
d1x6ea1	33	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.22
d2epsa1	39	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	99.22
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.22
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.21
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	99.19
d1x6ha2	36	Transcriptional repressor CTCF {Human (Homo sapien	99.14
d1p7aa_	37	Kruppel-like factor 3, Bklf {Mouse (Mus musculus)	99.13
d2adra1	29	ADR1 {Synthetic, based on Saccharomyces cerevisiae	99.12
d1sp1a_	29	Transcription factor sp1 {Human (Homo sapiens) [Ta	99.08
d1a1ia2	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	99.07
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	99.07
d1srka_	35	Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musc	99.06
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	99.04
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	99.02
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	99.01
d2ct1a2	36	Transcriptional repressor CTCF {Human (Homo sapien	98.98
d1x6ea2	26	Zinc finger protein 24 {Human (Homo sapiens) [TaxI	98.95
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.94
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.93
d1ncsa_	47	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.91
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.9
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.86
d2glia3	30	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.84
d2dlka2	36	Zinc finger protein 692, ZNF692 {Human (Homo sapie	98.82
d1ubdc3	30	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.79
d1sp2a_	31	Transcription factor sp1 {Human (Homo sapiens) [Ta	98.72
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.68
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.56
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.54
d1a1ia1	29	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.52
d1zfda_	32	SWI5 zinc-finger domains {Baker's yeast (Saccharom	98.52
d1ubdc4	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.42
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	98.36
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.32
d1a1ia3	28	ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}	98.32
d2epqa1	32	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.28
d2dmda2	26	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	98.19
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.17
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	98.16
d2epra1	35	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	98.14
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	98.0
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.99
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.97
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.93
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.93
d1ubdc2	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	97.87
d2dmda3	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.86
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.85
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.8
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.79
d1bboa1	28	Enhancer binding protein {Human (Homo sapiens) [Ta	97.77
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.66
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.6
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.54
d1njqa_	37	SUPERMAN zinc finger domain {Thale cress (Arabidop	97.53
d2dlqa3	30	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.5
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.49
d2csha2	44	Zinc finger protein 297b {Human (Homo sapiens) [Ta	97.46
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	97.43
d2glia5	29	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	97.39
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.37
d1bboa2	29	Enhancer binding protein {Human (Homo sapiens) [Ta	97.3
d2dlqa4	27	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.26
d1klra_	30	ZFY {Human (Homo sapiens) [TaxId: 9606]}	97.26
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	97.24
d1znfa_	26	XFIN, third domain {Xenopus laevis [TaxId: 8355]}	97.23
d2dmda1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	97.21
d2adra2	31	ADR1 {Synthetic, based on Saccharomyces cerevisiae	97.18
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.02
d2j7ja2	29	Transcription factor IIIA, TFIIIA {Xenopus laevis	97.0
d2glia4	31	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.95
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.87
d1bhia_	38	Transactivation domain of cre-bp1/atf-2 {Human (Ho	96.87
d1tf3a2	30	Transcription factor IIIA, TFIIIA {Xenopus laevis	96.83
d1x5wa2	29	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	96.56
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	96.52
d2dlqa1	26	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.51
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	96.49
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.42
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	96.28
d1ubdc1	28	Ying-yang 1 (yy1, zinc finger domain) {Human (Homo	96.21
d2dlqa2	28	GLI-Krueppel family member HKR3 {Mouse (Mus muscul	96.19
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	96.07
d1y0jb1	36	U-shaped transcription factor, different fingers {	95.9
d2drpa2	26	Tramtrack protein (two zinc-finger peptide) {Droso	95.72
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	95.69
d1x5wa1	28	Zinc finger protein 64, ZFP68 {Human (Homo sapiens	95.46
d2ct1a1	28	Transcriptional repressor CTCF {Human (Homo sapien	95.32
d1tf3a1	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	95.29
d2glia2	33	Five-finger GLI1 {Human (Homo sapiens) [TaxId: 960	95.02
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	94.94
d2j7ja1	28	Transcription factor IIIA, TFIIIA {Xenopus laevis	94.39
d1vd4a_	62	Transcription initiation factor TFIIE-alpha {Human	94.29
d1x6ha1	37	Transcriptional repressor CTCF {Human (Homo sapien	94.25
d2eppa1	53	PATZ1 {Human (Homo sapiens) [TaxId: 9606]}	94.09
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	94.0
d1y0jb1	36	U-shaped transcription factor, different fingers {	93.53
d2ctda2	30	Zinc finger protein 512, ZNF512 {Human (Homo sapie	92.99
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	92.98
d1yuja_	54	GAGA factor {Drosophila melanogaster [TaxId: 7227]	92.36
d1yuza2	36	Nigerythrin, C-terminal domain {Desulfovibrio vulg	92.2
d1nnqa2	37	Rubrerythrin, C-terminal domain {Archaeon Pyrococc	92.14
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.87
d2dlka1	30	Zinc finger protein 692, ZNF692 {Human (Homo sapie	91.72
d1zr9a1	67	Zinc finger protein 593, ZNF593 {Human (Homo sapie	91.46
d2drpa1	37	Tramtrack protein (two zinc-finger peptide) {Droso	90.54
d2ak3a2	37	Microbial and mitochondrial ADK, insert "zinc fing	89.68
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	88.51
d2ghfa2	36	Zinc fingers and homeoboxes protein 1, ZHX1 {Human	87.69
d1x6fa1	75	Zinc finger protein 462, ZNF462 {Human (Homo sapie	85.76
d1fu9a_	36	U-shaped transcription factor, different fingers {	85.12
d1tf3a3	31	Transcription factor IIIA, TFIIIA {Xenopus laevis	85.06
d1akya2	38	Microbial and mitochondrial ADK, insert "zinc fing	84.68
d2gmga1	105	Hypothetical protein PF0610 {Pyrococcus furiosus [	84.67
d2ct5a1	60	Zinc finger BED domain-containing protein 1 {Human	83.89

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.77  E-value=1.4e-19  Score=96.15  Aligned_cols=53  Identities=30%  Similarity=0.744  Sum_probs=50.5

Q ss_pred             CCCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhccCCchHHHHHHhhh
Q psy9067         133 ERPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       133 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h  186 (189)
                      ++||.|. ||++|.....|..|+++|++++||.|++||++|.+.+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5899995 9999999999999999999999999999999999999999999987

>d2csha1 g.37.1.1 (A:8-60) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.64  E-value=5.8e-17  Score=85.82  Aligned_cols=53  Identities=32%  Similarity=0.578  Sum_probs=50.7

Q ss_pred             CCCccCCCCCccccchHHHHhchhhcCCCCCccCccCCccCCChHHHHHHHHHh
Q psy9067         105 EKPHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIH  158 (189)
Q Consensus       105 ~~~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h  158 (189)
                      +++|.|+ ||+.|.....|..|+++|.+++||.|++|+++|...+.|..|+++|
T Consensus         1 EK~y~C~-Cgk~F~~~~~l~~H~~~Ht~ekpy~C~~C~k~F~~~~~L~~H~r~H   53 (53)
T d2csha1           1 DKLYPCQ-CGKSFTHKSQRDRHMSMHLGLRPYGCGVCGKKFKMKHHLVGHMKIH   53 (53)
T ss_dssp             CCCEECT-TSCEESSHHHHHHHHHHHSCCCSEECTTTSCEESSSHHHHHHHTTT
T ss_pred             CcCCCCC-CCCeECCHHHhHHHhhccccccCCcCCCcCCEecCHHHHHHHHhcC
Confidence            5789995 9999999999999999999999999999999999999999999876

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.45  E-value=7.2e-15  Score=70.78  Aligned_cols=36  Identities=36%  Similarity=0.607  Sum_probs=32.0

Q ss_pred             HHHHhhCCCcccCccchhccCCchHHHHHHhhhCCC
Q psy9067         154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTPL  189 (189)
Q Consensus       154 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  189 (189)
                      |.++|++++||+|+.||++|+++++|..|+++|.+|
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~v   37 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHMLV   37 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTCC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcCC
Confidence            567899999999999999999999999999998765

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.43  E-value=7.8e-15  Score=71.14  Aligned_cols=35  Identities=31%  Similarity=0.559  Sum_probs=26.3

Q ss_pred             HHHHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         154 HLRIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       154 H~~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |+++|++++||.|+.||++|.+.++|..|+++|+|
T Consensus         3 H~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtG   37 (38)
T d2cota2           3 SEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTG   37 (38)
T ss_dssp             CCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCC
T ss_pred             cCcccCCCCCEecCCCCceeeCHHHHHHhCccCCC
Confidence            55667777777777777777777777777777776

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.42  E-value=3e-14  Score=66.21  Aligned_cols=32  Identities=47%  Similarity=0.884  Sum_probs=27.8

Q ss_pred             HhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         157 IHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       157 ~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +|++++||+|..||++|.+.++|..|+++|+|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~Htg   32 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTG   32 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGC
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCC
Confidence            47888889999999999998889999888876

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.38  E-value=6.2e-14  Score=66.94  Aligned_cols=33  Identities=45%  Similarity=0.720  Sum_probs=26.9

Q ss_pred             HHhhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         156 RIHTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       156 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ++|++++||+|.+||++|.+.++|..|+++|++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~   33 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHD   33 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTC
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCC
Confidence            467888888888888888888888888888864

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.36  E-value=9.5e-14  Score=61.90  Aligned_cols=28  Identities=39%  Similarity=0.833  Sum_probs=24.7

Q ss_pred             CCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         161 EKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       161 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |+||+|++|+++|+.+++|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            6789999999999999999999999876

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.33  E-value=4e-13  Score=64.87  Aligned_cols=36  Identities=31%  Similarity=0.767  Sum_probs=26.8

Q ss_pred             CCCccCccCCccCCChHHHHHHHH-HhhCCCcccCcc
Q psy9067         133 ERPYQCAHCTYASPDTFKLKRHLR-IHTGEKPYACDI  168 (189)
Q Consensus       133 ~~~~~C~~C~~~f~~~~~l~~H~~-~h~~~~~~~C~~  168 (189)
                      ++||.|.+||+.|...+.|..|++ +|++++||+|.+
T Consensus         3 ~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           3 GKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            577777777777777777777765 577777777764

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.31  E-value=3.8e-13  Score=63.28  Aligned_cols=31  Identities=32%  Similarity=0.759  Sum_probs=24.8

Q ss_pred             hhCCCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         158 HTGEKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       158 h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |+|++||+|.+|++.|+++++|.+|+++|+.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~   32 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTD   32 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTS
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCC
Confidence            5678888888888888888888888888753

>d2cota2 g.37.1.1 (A:7-44) Zinc finger and SCAN domain-containing protein 16, ZSCAN16 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger and SCAN domain-containing protein 16, ZSCAN16
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=5.8e-13  Score=64.40  Aligned_cols=37  Identities=30%  Similarity=0.559  Sum_probs=34.1

Q ss_pred             hchhhcCCCCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         125 NHMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       125 ~H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +|+++|.+++||.|++||++|...+.|..|+++|+||
T Consensus         2 rH~~~Ht~ekpy~C~~CgK~F~~~s~L~~H~r~HtGE   38 (38)
T d2cota2           2 RSEWQQRERRRYKCDECGKSFSHSSDLSKHRRTHTGE   38 (38)
T ss_dssp             CCCSCCCCSCSSBCSSSCCBCSCHHHHHHHHTTTCCS
T ss_pred             ccCcccCCCCCEecCCCCceeeCHHHHHHhCccCCCC
Confidence            5888999999999999999999999999999999886

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.30  E-value=2.9e-13  Score=64.44  Aligned_cols=32  Identities=63%  Similarity=1.088  Sum_probs=26.1

Q ss_pred             HHhhCCCcccCccchhccCCchHHHHHHhhhC
Q psy9067         156 RIHTGEKPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       156 ~~h~~~~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      ++|+|++||+|++|+++|+.+++|.+|++.+|
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H   32 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKH   32 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHccccc
Confidence            36788888888888888888888888876554

>d1x6ea1 g.37.1.1 (A:8-40) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=3.7e-12  Score=59.03  Aligned_cols=33  Identities=45%  Similarity=0.851  Sum_probs=28.8

Q ss_pred             hcCCCCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         129 SHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       129 ~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      .|.+++||.|.+|+++|...+.|..|+++|++|
T Consensus         1 IHTgekpy~C~~Cgk~F~~~~~L~~H~r~HtgE   33 (33)
T d1x6ea1           1 IHSGEKPYGCVECGKAFSRSSILVQHQRVHTGE   33 (33)
T ss_dssp             TTTTCCCEECSSSCCEESSHHHHHHHHHGGGCS
T ss_pred             CcCCCCCeeCCCCCCEeCchHHhHhhccccCCC
Confidence            367889999999999999999999999999875

>d2epsa1 g.37.1.1 (A:408-446) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=4.3e-12  Score=61.16  Aligned_cols=37  Identities=30%  Similarity=0.596  Sum_probs=34.1

Q ss_pred             CCCCccCCCCCccccchHHHHhchh-hcCCCCCccCcc
Q psy9067         104 HEKPHKCSICDYASVELSKMRNHMR-SHTGERPYQCAH  140 (189)
Q Consensus       104 ~~~~~~C~~C~~~~~~~~~l~~H~~-~~~~~~~~~C~~  140 (189)
                      .++||.|++||+.|...+.|..|++ .|.+++||.|.+
T Consensus         2 ~~Kpy~C~~Cgk~F~~~~~L~~H~r~~Ht~ekpy~C~i   39 (39)
T d2epsa1           2 VGKPYICQSCGKGFSRPDHLNGHIKQVHTSERPHKCQV   39 (39)
T ss_dssp             SSCCEECSSSCCEESSHHHHHHHHHHTSCCCCCCCSSS
T ss_pred             CCCCccCCCCCCCcCChHHhhccCcCccCCCcCcCCcC
Confidence            4689999999999999999999976 799999999975

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.22  E-value=3.1e-12  Score=57.48  Aligned_cols=27  Identities=37%  Similarity=0.682  Sum_probs=24.6

Q ss_pred             CcccCccchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|++||++|+++++|.+|+++|+|
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~Htg   27 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQN   27 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCC
Confidence            589999999999999999999999987

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.21  E-value=2.7e-12  Score=57.78  Aligned_cols=27  Identities=30%  Similarity=0.746  Sum_probs=24.1

Q ss_pred             CcccCccchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|++||++|+..++|..|+++|+|
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTg   27 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTN   27 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTS
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccC
Confidence            588999999999999999999999987

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.19  E-value=2.1e-12  Score=55.96  Aligned_cols=26  Identities=46%  Similarity=0.847  Sum_probs=21.2

Q ss_pred             CcccCccchhccCCchHHHHHHhhhC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      +||+|..||++|++++.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57888888888888888888888874

>d1x6ha2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.14  E-value=1.6e-11  Score=58.40  Aligned_cols=34  Identities=35%  Similarity=0.708  Sum_probs=29.2

Q ss_pred             hhcCCCCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         128 RSHTGERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       128 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      ++|.|++||.|.+|+++|...+.|..|+++|+++
T Consensus         1 R~HTgekPy~C~~C~k~F~~~~~L~~H~r~H~~~   34 (36)
T d1x6ha2           1 RTHTGEKPYACSHCDKTFRQKQLLDMHFKRYHDP   34 (36)
T ss_dssp             TTCCCCCCEECSSSSCEESSHHHHHHHHHHTTCS
T ss_pred             CCCCCCCCEECCCCCCCcCCHhHHHHhCcccCCC
Confidence            4678889999999999999999999999888765

>d1p7aa_ g.37.1.1 (A:) Kruppel-like factor 3, Bklf {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Kruppel-like factor 3, Bklf
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.13  E-value=1.9e-11  Score=58.49  Aligned_cols=35  Identities=29%  Similarity=0.505  Sum_probs=31.4

Q ss_pred             chhhcCCCCCccCccCCccCCChHHHHHHHHHhhC
Q psy9067         126 HMRSHTGERPYQCAHCTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       126 H~~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~  160 (189)
                      |.+.|.+++||.|++|++.|..++.|..|+++|.+
T Consensus         2 h~R~HTgeKPy~C~~C~k~F~~~~~L~~H~r~H~~   36 (37)
T d1p7aa_           2 STRGSTGIKPFQCPDCDRSFSRSDHLALHRKRHML   36 (37)
T ss_dssp             CSSTTCCSSSBCCTTTCCCBSSHHHHHHHHGGGTC
T ss_pred             CCCccCCccCeEeCCCCCEecCHHHHHHHHhcCcC
Confidence            67889999999999999999999999999998854

>d2adra1 g.37.1.1 (A:102-130) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=99.12  E-value=2.3e-11  Score=54.65  Aligned_cols=29  Identities=48%  Similarity=0.726  Sum_probs=24.3

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCCC
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      +||.|++|++.|...+.|..|+++|+||+
T Consensus         1 kp~~C~~C~k~F~~~~~L~~H~r~HTgEK   29 (29)
T d2adra1           1 RSFVCEVCTRAFARQEHLKRHYRSHTNEK   29 (29)
T ss_dssp             CCBCCTTTCCCBSCHHHHHHHHHTTTSSC
T ss_pred             CcCCCCCCCCCCCCchHcccccCcccCCC
Confidence            57888888888888888888888888875

>d1sp1a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.08  E-value=4.9e-11  Score=53.46  Aligned_cols=29  Identities=21%  Similarity=0.560  Sum_probs=25.1

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCCC
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      +||.|++|++.|..++.|..|+++|++++
T Consensus         1 Kpy~C~~C~k~F~~~s~L~~H~r~HtgeK   29 (29)
T d1sp1a_           1 KKFACPECPKRFMRSDHLSKHIKTHQNKK   29 (29)
T ss_dssp             CCSCCTTTTCCCSCSHHHHHHHHGGGCCC
T ss_pred             CCEECCcCCCeecchHHhhhhcCccCCcC
Confidence            58889999999999999999999988875

>d1a1ia2 g.37.1.1 (A:132-159) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.07  E-value=3.7e-11  Score=53.34  Aligned_cols=28  Identities=36%  Similarity=0.763  Sum_probs=23.9

Q ss_pred             CCCccCccCCccCCChHHHHHHHHHhhC
Q psy9067         133 ERPYQCAHCTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       133 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  160 (189)
                      ++||.|++|++.|..++.|..|+++|+|
T Consensus         1 EKPy~C~~C~k~F~~~~~L~~H~r~HTG   28 (28)
T d1a1ia2           1 QKPFQCRICMRNFSRSDHLTTHIRTHTG   28 (28)
T ss_dssp             CCCEECTTTCCEESCHHHHHHHHHHHHC
T ss_pred             CcCccCCCCcCEecccccccccCCCccC
Confidence            5788888888888888888888888875

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=99.07  E-value=3.3e-12  Score=64.46  Aligned_cols=31  Identities=23%  Similarity=0.534  Sum_probs=21.8

Q ss_pred             hhCCCcccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         158 HTGEKPYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       158 h~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |++++||.|++  |+++|+.+++|..|+++|+|
T Consensus        13 h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htg   45 (47)
T d1ncsa_          13 EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLE   45 (47)
T ss_dssp             EETTTEEECCCTTCCCEECSSSSHHHHHHHHTT
T ss_pred             ccCCCCeECCcCCCCccccCchHHHhhcccccC
Confidence            66677777766  77777777777777777765

>d1srka_ g.37.1.1 (A:) Zinc finger protein ZFPM1 (FOG-1) {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein ZFPM1 (FOG-1)
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=99.06  E-value=4.7e-11  Score=55.97  Aligned_cols=32  Identities=34%  Similarity=0.702  Sum_probs=26.2

Q ss_pred             cCCCCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         130 HTGERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       130 ~~~~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +.|++||.|++|++.|..++.|..|+++|++.
T Consensus         2 ~TGekPy~C~~C~k~F~~~~~L~~H~r~Ht~~   33 (35)
T d1srka_           2 SSGKRPFVCRICLSAFTTKANCARHLKVHTDT   33 (35)
T ss_dssp             CSCCSCEECSSSCCEESSHHHHHHHHGGGTSC
T ss_pred             CCCCccccCCCCCCcccChHHHHHHccccCCc
Confidence            46788888888888888888888888888764

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.04  E-value=4.5e-11  Score=53.94  Aligned_cols=27  Identities=33%  Similarity=0.684  Sum_probs=23.7

Q ss_pred             CcccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||+|++  ||++|+.+++|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtG   29 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTG   29 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTT
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcC
Confidence            5888988  99999999999999999887

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.02  E-value=9.3e-11  Score=55.41  Aligned_cols=33  Identities=24%  Similarity=0.704  Sum_probs=26.9

Q ss_pred             ccCcc--CCccCCChHHHHHHHHHhhCCCcccCcc
Q psy9067         136 YQCAH--CTYASPDTFKLKRHLRIHTGEKPYACDI  168 (189)
Q Consensus       136 ~~C~~--C~~~f~~~~~l~~H~~~h~~~~~~~C~~  168 (189)
                      |.|+.  |+++|...+.|..|+++|++++||+|+.
T Consensus         2 f~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~f   36 (36)
T d2dlka2           2 FSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICEF   36 (36)
T ss_dssp             EECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCCS
T ss_pred             eECCCCCCCCeeCChhHhccccCeeCCCCCEeCCC
Confidence            56765  8888888888888888888888888863

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=99.01  E-value=4.6e-11  Score=54.00  Aligned_cols=27  Identities=41%  Similarity=0.848  Sum_probs=23.4

Q ss_pred             CcccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|++  ||++|+..++|.+|+++|+|
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTG   29 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTG   29 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCC
Confidence            5888987  99999999999999998876

>d2ct1a2 g.37.1.1 (A:8-43) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.98  E-value=1.6e-10  Score=54.69  Aligned_cols=33  Identities=27%  Similarity=0.638  Sum_probs=23.8

Q ss_pred             hhCCCCCcccCCCCCccccchhhHHHHHhhcCC
Q psy9067          28 KSHSEERPHKCSVCERGFKTIASLQNHINTHTG   60 (189)
Q Consensus        28 ~~~~~~~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (189)
                      ++|++++||.|+.|++.|....+|..|+..++.
T Consensus         1 R~HTgekP~~C~~C~k~F~~~~~L~~H~~~~H~   33 (36)
T d2ct1a2           1 RTHSGEKPYECYICHARFTQSGTMKMHILQKHT   33 (36)
T ss_dssp             CCCSCCCSEECTTTCCEESCHHHHHHHHHHHSS
T ss_pred             CccCCCCCEeCCCCcccccchHHHHHHcccccC
Confidence            357777777777777777777777777665443

>d1x6ea2 g.37.1.1 (A:41-66) Zinc finger protein 24 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 24
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.95  E-value=1.8e-10  Score=49.78  Aligned_cols=26  Identities=42%  Similarity=0.768  Sum_probs=20.7

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhh
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~  159 (189)
                      +||.|++||++|...+.|..|+++|+
T Consensus         1 KPy~C~eCgK~F~~~s~L~~HqriHT   26 (26)
T d1x6ea2           1 KPYKCLECGKAFSQNSGLINHQRIHT   26 (26)
T ss_dssp             CCEECSSSCCEESSHHHHHHHHHHHH
T ss_pred             CCccCCCCcCeeccCcccccCccCCC
Confidence            57888888888888888888888774

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.94  E-value=3.1e-10  Score=51.92  Aligned_cols=28  Identities=32%  Similarity=0.832  Sum_probs=23.1

Q ss_pred             CCcccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         161 EKPYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       161 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |+||.|++  ||++|+..++|.+|+++|++
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~   30 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQE   30 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccC
Confidence            57888877  88888888888888888864

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.93  E-value=1.1e-10  Score=52.16  Aligned_cols=27  Identities=48%  Similarity=0.974  Sum_probs=22.9

Q ss_pred             CcccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|++  |+++|++.++|.+|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5788877  88888888888888888876

>d1ncsa_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.91  E-value=8.7e-11  Score=59.13  Aligned_cols=40  Identities=13%  Similarity=0.540  Sum_probs=34.5

Q ss_pred             HHHhchhhcCCCCCccCcc--CCccCCChHHHHHHHHHhhCCC
Q psy9067         122 KMRNHMRSHTGERPYQCAH--CTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       122 ~l~~H~~~~~~~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      .+..|+. +.+++||.|.+  |++.|...+.|..|+++|++++
T Consensus         6 ~l~~h~~-h~gekpy~C~~~~C~k~F~~~~~L~~H~r~Htgek   47 (47)
T d1ncsa_           6 SIDKYVK-EMPDKTFECLFPGCTKTFKRRYNIRSHIQTHLEDR   47 (47)
T ss_dssp             SGGGSCE-EETTTEEECCCTTCCCEECSSSSHHHHHHHHTTTC
T ss_pred             hhcchhh-ccCCCCeECCcCCCCccccCchHHHhhcccccCCC
Confidence            4556664 88999999977  9999999999999999999875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.90  E-value=3.2e-10  Score=51.61  Aligned_cols=27  Identities=41%  Similarity=0.894  Sum_probs=23.4

Q ss_pred             CcccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|++  ||++|+..++|..|+++|+|
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~Htg   29 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTG   29 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccc
Confidence            5888964  99999999999999999987

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.86  E-value=4e-10  Score=49.71  Aligned_cols=26  Identities=50%  Similarity=1.049  Sum_probs=22.1

Q ss_pred             CcccCcc--chhccCCchHHHHHHhhhC
Q psy9067         162 KPYACDI--CHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       162 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  187 (189)
                      +||.|++  ||++|+..++|.+|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5788887  8888888888999988885

>d2glia3 g.37.1.1 (A:168-197) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.84  E-value=1.4e-09  Score=48.90  Aligned_cols=28  Identities=43%  Similarity=0.765  Sum_probs=23.1

Q ss_pred             CCccCcc--CCccCCChHHHHHHHHHhhCC
Q psy9067         134 RPYQCAH--CTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       134 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +||.|++  |+++|..++.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HtGE   30 (30)
T d2glia3           1 KPHKCTFEGCRKSYSRLENLKTHLRSHTGE   30 (30)
T ss_dssp             CCCCCCSTTCCCCCSSHHHHHHHHHHTTTC
T ss_pred             CCeeCCCCCCCceECChhHhhhhcCcCcCC
Confidence            5788877  888888888888888888875

>d2dlka2 g.37.1.1 (A:38-73) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.82  E-value=7.7e-10  Score=52.17  Aligned_cols=33  Identities=24%  Similarity=0.567  Sum_probs=30.6

Q ss_pred             CccCCC--CCccccchHHHHhchhhcCCCCCccCc
Q psy9067         107 PHKCSI--CDYASVELSKMRNHMRSHTGERPYQCA  139 (189)
Q Consensus       107 ~~~C~~--C~~~~~~~~~l~~H~~~~~~~~~~~C~  139 (189)
                      .|.|++  ||+.|.....|..|+++|.+++||.|+
T Consensus         1 tf~C~~~~C~k~F~~~~~L~~H~r~Htgekpy~C~   35 (36)
T d2dlka2           1 SFSCPEPACGKSFNFKKHLKEHMKLHSDTRDYICE   35 (36)
T ss_dssp             CEECSCTTTCCEESSHHHHHHHHHHHHTSCCCSCC
T ss_pred             CeECCCCCCCCeeCChhHhccccCeeCCCCCEeCC
Confidence            367876  999999999999999999999999996

>d1ubdc3 g.37.1.1 (C:351-380) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.79  E-value=1.6e-09  Score=48.77  Aligned_cols=28  Identities=43%  Similarity=0.952  Sum_probs=23.9

Q ss_pred             CCccCcc--CCccCCChHHHHHHHHHhhCC
Q psy9067         134 RPYQCAH--CTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       134 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +||.|++  |+++|...+.|..|+++|+||
T Consensus         1 kp~~C~~~gCgk~F~~~~~L~~H~r~HTGE   30 (30)
T d1ubdc3           1 KPFQCTFEGCGKRFSLDFNLRTHVRIHTGD   30 (30)
T ss_dssp             CCEECCSTTCCCEESCHHHHHHHHHHHHCC
T ss_pred             CCccCCCCCCCceECcHHHcCccccccCCC
Confidence            5888876  999999999999999988875

>d1sp2a_ g.37.1.1 (A:) Transcription factor sp1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor sp1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.72  E-value=4.1e-09  Score=47.83  Aligned_cols=29  Identities=45%  Similarity=0.796  Sum_probs=22.0

Q ss_pred             CCccCc--cCCccCCChHHHHHHHHHhhCCC
Q psy9067         134 RPYQCA--HCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       134 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      +||.|+  .|++.|...+.|..|+++|++++
T Consensus         1 kpf~C~~~~C~k~F~~~~~L~~H~r~HtgeK   31 (31)
T d1sp2a_           1 RPFMCTWSYCGKRFTRSDELQRHKRTHTGEK   31 (31)
T ss_dssp             CCCBCCSTTCCCBCSSHHHHHHHHTTTSCCC
T ss_pred             CcCCCcCCCCCcCcCChhHhhhhcCcccccC
Confidence            577774  58888888888888888887764

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.68  E-value=4.5e-09  Score=43.04  Aligned_cols=26  Identities=35%  Similarity=0.754  Sum_probs=21.4

Q ss_pred             cccCccchhccCCchHHHHHHhhhCC
Q psy9067         163 PYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |.+|+.|++.|+.+..|..||+.|+|
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            46788888888888888888888876

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.56  E-value=1.7e-08  Score=42.72  Aligned_cols=26  Identities=54%  Similarity=1.057  Sum_probs=20.0

Q ss_pred             CCcccCccchhccCCchHHHHHHhhh
Q psy9067         161 EKPYACDICHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       161 ~~~~~C~~C~~~f~~~~~l~~H~~~h  186 (189)
                      |+||.|.+||+.|+.+....+|.++|
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH   26 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIH   26 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGG
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhc
Confidence            46777888888888777777777776

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.54  E-value=1.8e-08  Score=42.28  Aligned_cols=28  Identities=36%  Similarity=0.636  Sum_probs=25.1

Q ss_pred             CCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         161 EKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       161 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ++||+|.+|+..-.+++.|..|++.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            5789999999999999999999999987

>d1a1ia1 g.37.1.1 (A:103-131) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.52  E-value=1.8e-08  Score=44.76  Aligned_cols=27  Identities=48%  Similarity=0.952  Sum_probs=20.6

Q ss_pred             CCccCcc--CCccCCChHHHHHHHHHhhC
Q psy9067         134 RPYQCAH--CTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       134 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  160 (189)
                      +||.|++  |++.|...+.|..|+++|+|
T Consensus         1 Kp~~C~~~gC~k~F~~~~~L~~H~r~HtG   29 (29)
T d1a1ia1           1 RPYACPVESCDRRFSRSADLTRHIRIHTG   29 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHTHHHHT
T ss_pred             CCeECCCCCCCcEECchhHhhhhcCccCC
Confidence            5777765  88888888888888887765

>d1zfda_ g.37.1.1 (A:) SWI5 zinc-finger domains {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: SWI5 zinc-finger domains
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=98.52  E-value=4.6e-08  Score=44.49  Aligned_cols=29  Identities=38%  Similarity=0.756  Sum_probs=22.1

Q ss_pred             CCCccCcc--CCccCCChHHHHHHHHHhhCC
Q psy9067         133 ERPYQCAH--CTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       133 ~~~~~C~~--C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      ++||.|++  |++.|...+.|..|+++|+.+
T Consensus         1 ErP~~C~~pgC~k~F~r~~~L~~H~r~Ht~k   31 (32)
T d1zfda_           1 DRPYSCDHPGCDKAFVRNHDLIRHKKSHQEK   31 (32)
T ss_dssp             CCSBCCCCTTCCCCBSSSHHHHHHHGGGTCC
T ss_pred             CcCeECcCCCCCCeeCCHHHHHHHhhhccCC
Confidence            46788866  888888888888888887653

>d1ubdc4 g.37.1.1 (C:381-408) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.42  E-value=5.3e-08  Score=42.73  Aligned_cols=26  Identities=35%  Similarity=0.742  Sum_probs=20.6

Q ss_pred             CCccCcc--CCccCCChHHHHHHHHHhh
Q psy9067         134 RPYQCAH--CTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       134 ~~~~C~~--C~~~f~~~~~l~~H~~~h~  159 (189)
                      +||.|+.  |+++|...+.|..|+++|+
T Consensus         1 rPf~C~~~gC~K~F~~~~~L~~H~r~HT   28 (28)
T d1ubdc4           1 RPYVCPFDGCNKKFAQSTNLKSHILTHA   28 (28)
T ss_dssp             CCCCCCSTTCCCCCSSTTTTHHHHHHHC
T ss_pred             CCcCCCCCCcCCcCCCHHHHHHHHhhcc
Confidence            5788866  8888888888888888774

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.36  E-value=1.1e-07  Score=40.84  Aligned_cols=27  Identities=37%  Similarity=0.805  Sum_probs=24.1

Q ss_pred             CcccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|.+  |++++...+.|++|++++||
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~HG   29 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVHG   29 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSCC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhCC
Confidence            5888977  89999999999999999886

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.32  E-value=1.4e-07  Score=40.47  Aligned_cols=28  Identities=32%  Similarity=0.720  Sum_probs=17.7

Q ss_pred             CCCccCccCCccCCChHHHHHHHHHhhC
Q psy9067         133 ERPYQCAHCTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       133 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  160 (189)
                      ++||.|++|+.-|..+..+.-|.+.|.+
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            3566666666666666666666666644

>d1a1ia3 g.37.1.1 (A:160-187) ZIF268 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZIF268
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.32  E-value=1.6e-07  Score=39.71  Aligned_cols=27  Identities=33%  Similarity=0.657  Sum_probs=23.1

Q ss_pred             CCCccCccCCccCCChHHHHHHHHHhh
Q psy9067         133 ERPYQCAHCTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       133 ~~~~~C~~C~~~f~~~~~l~~H~~~h~  159 (189)
                      ++||.|.+||+.|..+.+...|.++|.
T Consensus         1 EkPf~C~~CgrkFArsderkRH~kiH~   27 (28)
T d1a1ia3           1 EKPFACDICGRKFARSDERKRHTKIHL   27 (28)
T ss_dssp             CCCEECTTTCCEESSHHHHHHHHGGGC
T ss_pred             CCCcccchhhhhhhcchhhhhhhhhcc
Confidence            478999999999999999999988873

>d2epqa1 g.37.1.1 (A:380-411) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.28  E-value=2.7e-07  Score=39.53  Aligned_cols=28  Identities=36%  Similarity=0.796  Sum_probs=21.4

Q ss_pred             CCcccCccchhccCCchHHHHHHhhhCC
Q psy9067         161 EKPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       161 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ++||.|++|+..|..+.-+.-|.+.|-|
T Consensus         1 ekp~~cpic~qrfkrkdrmsyhvrshdg   28 (32)
T d2epqa1           1 EKPYSCPVCGLRFKRKDRMSYHVRSHDG   28 (32)
T ss_dssp             CCSSEETTTTEECSCHHHHHHHHHHHSC
T ss_pred             CCCcccchHHHHhhccccceEeeecccC
Confidence            4678888888888887777788777754

>d2dmda2 g.37.1.1 (A:8-33) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.19  E-value=4.5e-07  Score=37.00  Aligned_cols=26  Identities=42%  Similarity=0.715  Sum_probs=17.0

Q ss_pred             CccCccCCccCCChHHHHHHHHHhhC
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~~h~~  160 (189)
                      |..|++|++.|+.+..|..|++.|++
T Consensus         1 phkc~~c~kcfsrkdklk~hmr~htg   26 (26)
T d2dmda2           1 PHKCEVCGKCFSRKDKLKTHMRCHTG   26 (26)
T ss_dssp             CCCBTTTTBCCCCHHHHHHHGGGCCC
T ss_pred             CCccchhhhHhcchhHHHHHhhccCC
Confidence            34566777777777777777666653

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.17  E-value=3e-07  Score=40.33  Aligned_cols=29  Identities=34%  Similarity=0.738  Sum_probs=15.3

Q ss_pred             ccCCCCCccccchHHHHhchhhcCCCCCc
Q psy9067         108 HKCSICDYASVELSKMRNHMRSHTGERPY  136 (189)
Q Consensus       108 ~~C~~C~~~~~~~~~l~~H~~~~~~~~~~  136 (189)
                      ..|+.||++|.+...|.+|...|.+++||
T Consensus         6 ~~ce~cgk~frdvyhlnrhklshs~ekpy   34 (35)
T d2epra1           6 VACEICGKIFRDVYHLNRHKLSHSGEKPY   34 (35)
T ss_dssp             EEETTTTEEESSHHHHHHHGGGSCSCCCC
T ss_pred             hhHHHHHHHHHHHHHHHhhhcccCCCCCC
Confidence            34555555555555555555555555554

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.16  E-value=5.2e-07  Score=37.55  Aligned_cols=25  Identities=40%  Similarity=0.745  Sum_probs=21.1

Q ss_pred             ccCccchhccCCchHHHHHHhhhCC
Q psy9067         164 YACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ..|..||++|..++.|.+|+..|+|
T Consensus         3 hvc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           3 HVCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             EECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             chHHHHhHHHHHHHHHHHHhhcccC
Confidence            4688888888888888888888876

>d2epra1 g.37.1.1 (A:350-384) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=98.14  E-value=7.9e-07  Score=38.97  Aligned_cols=32  Identities=38%  Similarity=0.745  Sum_probs=29.3

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCCCccc
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYA  165 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~  165 (189)
                      +...|.+||++|.....|..|...|++++||.
T Consensus         4 k~~~ce~cgk~frdvyhlnrhklshs~ekpys   35 (35)
T d2epra1           4 KQVACEICGKIFRDVYHLNRHKLSHSGEKPYS   35 (35)
T ss_dssp             CSEEETTTTEEESSHHHHHHHGGGSCSCCCCC
T ss_pred             hhhhHHHHHHHHHHHHHHHhhhcccCCCCCCC
Confidence            45689999999999999999999999999984

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=98.00  E-value=3.8e-06  Score=34.38  Aligned_cols=26  Identities=42%  Similarity=0.681  Sum_probs=21.4

Q ss_pred             cCccCCccCCChHHHHHHHHHhhCCC
Q psy9067         137 QCAHCTYASPDTFKLKRHLRIHTGEK  162 (189)
Q Consensus       137 ~C~~C~~~f~~~~~l~~H~~~h~~~~  162 (189)
                      +|+.|.+.|.++..|..|.+.|+|++
T Consensus         2 qcp~c~k~f~skyylkvhnr~htgek   27 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTGEK   27 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSSCC
T ss_pred             cCcchHHHHHHhHhhhhccccccCCC
Confidence            68888888888888888888888764

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.99  E-value=2.1e-06  Score=36.09  Aligned_cols=25  Identities=36%  Similarity=0.635  Sum_probs=21.8

Q ss_pred             ccCccchhccCCchHHHHHHhhhCC
Q psy9067         164 YACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |.|+.||......|-|.+|+++|++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~   26 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTD   26 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSS
T ss_pred             ccccccCcccCCHHHHHHHHHHhcC
Confidence            7788899888888889999998876

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.97  E-value=1.7e-06  Score=40.12  Aligned_cols=26  Identities=46%  Similarity=0.906  Sum_probs=20.9

Q ss_pred             hCCCcccCccchhccCCchHHHHHHh
Q psy9067         159 TGEKPYACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       159 ~~~~~~~C~~C~~~f~~~~~l~~H~~  184 (189)
                      +|.+||.|.+|++.|-++..+.+|.-
T Consensus         1 TGiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           1 TGIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCCceeccchhhhhhhHHHHHHhhh
Confidence            35688888888888888888888853

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=2.3e-06  Score=35.43  Aligned_cols=26  Identities=42%  Similarity=0.784  Sum_probs=23.4

Q ss_pred             CcccCccchhccCCchHHHHHHhhhC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      +||+|..|...-...+.|.+|+++|.
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            68999999999999999999999884

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.93  E-value=4e-06  Score=35.40  Aligned_cols=27  Identities=33%  Similarity=0.616  Sum_probs=24.3

Q ss_pred             CcccCccchhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +||.|..|....+..++|..|+++.|+
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            589999999999999999999998775

>d1ubdc2 g.37.1.1 (C:323-350) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.87  E-value=3.4e-06  Score=35.06  Aligned_cols=24  Identities=50%  Similarity=0.775  Sum_probs=14.6

Q ss_pred             cCccCCccCCChHHHHHHHHHhhC
Q psy9067         137 QCAHCTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       137 ~C~~C~~~f~~~~~l~~H~~~h~~  160 (189)
                      .|.+||++|..++.|.+|+-+|++
T Consensus         4 vc~ecgkaf~essklkrh~lvhtg   27 (28)
T d1ubdc2           4 VCAECGKAFVESSKLKRHQLVHTG   27 (28)
T ss_dssp             ECTTTCCEESSHHHHHHHGGGTSC
T ss_pred             hHHHHhHHHHHHHHHHHHhhcccC
Confidence            455666666666666666666554

>d2dmda3 g.37.1.1 (A:62-90) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.86  E-value=3.6e-06  Score=35.14  Aligned_cols=28  Identities=54%  Similarity=1.037  Sum_probs=20.2

Q ss_pred             CCCccCccCCccCCChHHHHHHHHHhhC
Q psy9067         133 ERPYQCAHCTYASPDTFKLKRHLRIHTG  160 (189)
Q Consensus       133 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~  160 (189)
                      ++||.|..|......++.|..|++.|+|
T Consensus         1 erpfkcqlcsy~srnssqltvhlr~htg   28 (29)
T d2dmda3           1 ERPFKCQICPYASRNSSQLTVHLRSHTG   28 (29)
T ss_dssp             CCCEECSSSSCEESSHHHHHHHHTTCCS
T ss_pred             CCcceeeecccccCCchheEEeeecccC
Confidence            3677777777777777777777777765

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.85  E-value=3.9e-06  Score=33.76  Aligned_cols=24  Identities=29%  Similarity=0.862  Sum_probs=19.5

Q ss_pred             ccCccchhccCCchHHHHHHhhhC
Q psy9067         164 YACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      |+|..|..+|-.++.|.+|++.|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            678888888888888888888773

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.80  E-value=4.1e-06  Score=35.20  Aligned_cols=24  Identities=29%  Similarity=0.685  Sum_probs=21.5

Q ss_pred             cccCccchhccCCchHHHHHHhhh
Q psy9067         163 PYACDICHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~~h  186 (189)
                      ||.|..|..+|.++-+|.+||+..
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkSK   24 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKSK   24 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHSS
T ss_pred             CcccceeeeeEeeccchhHhhhhh
Confidence            689999999999999999999754

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.79  E-value=6.3e-06  Score=34.50  Aligned_cols=25  Identities=40%  Similarity=0.886  Sum_probs=19.1

Q ss_pred             CcccCcc--chhccCCchHHHHHHhhh
Q psy9067         162 KPYACDI--CHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       162 ~~~~C~~--C~~~f~~~~~l~~H~~~h  186 (189)
                      .||+|+.  |++.|+..+-|.+|-++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            5777766  788888888888887765

>d1bboa1 g.37.1.1 (A:1-28) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.77  E-value=1e-05  Score=33.97  Aligned_cols=26  Identities=27%  Similarity=0.537  Sum_probs=19.0

Q ss_pred             ccCCCCCccccchHHHHhchhhcCCC
Q psy9067         108 HKCSICDYASVELSKMRNHMRSHTGE  133 (189)
Q Consensus       108 ~~C~~C~~~~~~~~~l~~H~~~~~~~  133 (189)
                      |.|++||....-.+.|..|+++|.++
T Consensus         2 YvC~~Cg~~C~KPSvL~KHIRsHT~~   27 (28)
T d1bboa1           2 YICEECGIRAKKPSMLKKHIRTHTDV   27 (28)
T ss_dssp             CBCTTTCCBCSSHHHHHHHHHHTSSC
T ss_pred             ccccccCcccCCHHHHHHHHHHhcCC
Confidence            67777777777777777777777665

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.66  E-value=9e-06  Score=34.24  Aligned_cols=26  Identities=23%  Similarity=0.557  Sum_probs=22.3

Q ss_pred             CcccCccchhccCCchHHHHHHhhhC
Q psy9067         162 KPYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      +||+|+.|+.-....++|.+|++.-|
T Consensus         1 rPFkC~~CsFDtkq~SnL~kH~kk~H   26 (29)
T d1x5wa2           1 RPFKCNYCSFDTKQPSNLSKHMKKFH   26 (29)
T ss_dssp             CSEECSSSSCEESSHHHHHHHHHHHH
T ss_pred             CCcccceecccccCcchHHHHHHHHc
Confidence            58999999999999999999986544

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.60  E-value=3.4e-05  Score=35.50  Aligned_cols=30  Identities=33%  Similarity=0.717  Sum_probs=22.3

Q ss_pred             CCcccCCCCCccccchhhHHHHHhhcCCCC
Q psy9067          33 ERPHKCSVCERGFKTIASLQNHINTHTGVK   62 (189)
Q Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~   62 (189)
                      .+.|+|..|++.|.+-..|--|++.|..++
T Consensus         3 ~r~~~C~~C~k~F~s~qALGGH~~~Hr~~r   32 (37)
T d1njqa_           3 PRSYTCSFCKREFRSAQALGGHMNVHRRDR   32 (37)
T ss_dssp             SSSEECTTTCCEESSHHHHHHHHHTTCCSC
T ss_pred             CCccCCCCCCCccCCcccccchHhhhcchH
Confidence            356788888888888888888887775443

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.54  E-value=4.2e-05  Score=31.98  Aligned_cols=26  Identities=27%  Similarity=0.685  Sum_probs=11.9

Q ss_pred             cccCccchhccCCchHHHHHHhhhCC
Q psy9067         163 PYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      -|.|+.|...|..+-.|..||-.|+|
T Consensus         4 vftcs~cqe~f~rrmelr~hmvshtg   29 (30)
T d2dlqa3           4 VFTCSVCQETFRRRMELRLHMVSHTG   29 (30)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHHHSS
T ss_pred             eEEeHHHHHHHHHHHhheeeeecccC
Confidence            34444444444444444444444443

>d1njqa_ g.37.1.3 (A:) SUPERMAN zinc finger domain {Thale cress (Arabidopsis thaliana) [TaxId: 3702]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Plant C2H2 finger (QALGGH zinc finger)
domain: SUPERMAN zinc finger domain
species: Thale cress (Arabidopsis thaliana) [TaxId: 3702]

Probab=97.53  E-value=3.2e-05  Score=35.55  Aligned_cols=26  Identities=27%  Similarity=0.635  Sum_probs=13.8

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhh
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~  159 (189)
                      +.|.|.+|++.|.+.++|-.|++.|.
T Consensus         4 r~~~C~~C~k~F~s~qALGGH~~~Hr   29 (37)
T d1njqa_           4 RSYTCSFCKREFRSAQALGGHMNVHR   29 (37)
T ss_dssp             SSEECTTTCCEESSHHHHHHHHHTTC
T ss_pred             CccCCCCCCCccCCcccccchHhhhc
Confidence            34555555555555555555555553

>d2dlqa3 g.37.1.1 (A:63-92) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.50  E-value=4e-05  Score=32.04  Aligned_cols=29  Identities=31%  Similarity=0.635  Sum_probs=26.5

Q ss_pred             CCCccCccCCccCCChHHHHHHHHHhhCC
Q psy9067         133 ERPYQCAHCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       133 ~~~~~C~~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +..|.|.+|...|....+|+.|+..|+|+
T Consensus         2 eqvftcs~cqe~f~rrmelr~hmvshtge   30 (30)
T d2dlqa3           2 EQVFTCSVCQETFRRRMELRLHMVSHTGE   30 (30)
T ss_dssp             CCCEECSSSCCEESSHHHHHHHHHHHSSS
T ss_pred             cceEEeHHHHHHHHHHHhheeeeecccCC
Confidence            46789999999999999999999999875

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.49  E-value=1.7e-05  Score=34.13  Aligned_cols=26  Identities=31%  Similarity=0.790  Sum_probs=22.0

Q ss_pred             CcccCcc--chhccCCchHHHHHH-hhhC
Q psy9067         162 KPYACDI--CHARFTQSNSLKSHR-LIHT  187 (189)
Q Consensus       162 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~  187 (189)
                      +||.|.+  |.++|++.++-.+|+ |+|.
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs   29 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHS   29 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTC
T ss_pred             CCccccCCChhhhhcchhhhhhhcccccc
Confidence            5888977  999999999999997 7774

>d2csha2 g.37.1.1 (A:61-104) Zinc finger protein 297b {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 297b
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.46  E-value=4.8e-05  Score=35.16  Aligned_cols=25  Identities=28%  Similarity=0.561  Sum_probs=21.7

Q ss_pred             CCCCccCccCCccCCChHHHHHHHH
Q psy9067         132 GERPYQCAHCTYASPDTFKLKRHLR  156 (189)
Q Consensus       132 ~~~~~~C~~C~~~f~~~~~l~~H~~  156 (189)
                      |.+||.|.+|++.|-..+++..|..
T Consensus         2 GiKPYeC~~C~KrFMWRDSF~RH~~   26 (44)
T d2csha2           2 GIKPYECNICAKRFMWRDSFHRHVT   26 (44)
T ss_dssp             CCCCEECSSSCCEESCHHHHHHHHH
T ss_pred             CCCceeccchhhhhhhHHHHHHhhh
Confidence            6789999999999999999998864

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.43  E-value=4.2e-05  Score=34.88  Aligned_cols=26  Identities=23%  Similarity=0.520  Sum_probs=12.1

Q ss_pred             CCCccC--ccCCccCCChHHHHHHHHHh
Q psy9067         133 ERPYQC--AHCTYASPDTFKLKRHLRIH  158 (189)
Q Consensus       133 ~~~~~C--~~C~~~f~~~~~l~~H~~~h  158 (189)
                      ++||.|  +.|+..|.+...|..|...|
T Consensus         4 dkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           4 DKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             CCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCceecCCCCccccccchHHHHHhhhhh
Confidence            344544  33444444444444444444

>d2glia5 g.37.1.1 (A:229-257) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.39  E-value=8.2e-05  Score=31.69  Aligned_cols=26  Identities=27%  Similarity=0.708  Sum_probs=14.8

Q ss_pred             CcccCCC--CCccccchhhHHHHHhhcC
Q psy9067          34 RPHKCSV--CERGFKTIASLQNHINTHT   59 (189)
Q Consensus        34 ~~~~C~~--C~~~f~~~~~l~~H~~~~~   59 (189)
                      +||.|..  |++.+.+.+.|..|++.++
T Consensus         1 KPY~Ck~~gC~K~YtdPSSLRKH~k~~H   28 (29)
T d2glia5           1 KPYVCKLPGCTKRYTDPSSLRKHVKTVH   28 (29)
T ss_dssp             CCEECCSTTTCCEESSHHHHHHHHHHSC
T ss_pred             CCeecccCCCCcccCCHHHHHHHHHhhC
Confidence            3555554  5566666666666665543

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.37  E-value=4.6e-05  Score=32.80  Aligned_cols=22  Identities=36%  Similarity=0.878  Sum_probs=17.1

Q ss_pred             cccCccchhccCCchHHHHHHh
Q psy9067         163 PYACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~  184 (189)
                      ||.|.+|++.|+.+.-|.+|.+
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~q   22 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQ   22 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHT
T ss_pred             CcccccccchhhHHHHHHHHHH
Confidence            6778888888888887888854

>d1bboa2 g.37.1.1 (A:29-57) Enhancer binding protein {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Enhancer binding protein
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.30  E-value=7.9e-05  Score=31.19  Aligned_cols=23  Identities=35%  Similarity=0.798  Sum_probs=17.2

Q ss_pred             cccCCCCCccccchhhHHHHHhh
Q psy9067          35 PHKCSVCERGFKTIASLQNHINT   57 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~   57 (189)
                      ||.|..|+..|..+.+|..||.+
T Consensus         1 py~C~~CnF~FKTKGNLTKHmkS   23 (29)
T d1bboa2           1 PYHCTYCNFSFKTKGNLTKHMKS   23 (29)
T ss_dssp             CEECSSSSCEESSHHHHHHHHHS
T ss_pred             CcccceeeeeEeeccchhHhhhh
Confidence            56777777777777777777765

>d2dlqa4 g.37.1.1 (A:8-34) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.26  E-value=8.6e-05  Score=30.25  Aligned_cols=24  Identities=38%  Similarity=0.664  Sum_probs=22.7

Q ss_pred             cCccchhccCCchHHHHHHhhhCC
Q psy9067         165 ACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       165 ~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +|+.|.++|-++..|..|-+.|+|
T Consensus         2 qcp~c~k~f~skyylkvhnr~htg   25 (27)
T d2dlqa4           2 ECPTCHKKFLSKYYLKVHNRKHTG   25 (27)
T ss_dssp             CCTTTCCCCSSHHHHHHHHHHHSS
T ss_pred             cCcchHHHHHHhHhhhhccccccC
Confidence            699999999999999999999987

>d1klra_ g.37.1.1 (A:) ZFY {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ZFY
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.26  E-value=0.00015  Score=30.51  Aligned_cols=27  Identities=26%  Similarity=0.502  Sum_probs=18.9

Q ss_pred             CcccCCCCCccccchhhHHHHHhhcCC
Q psy9067          34 RPHKCSVCERGFKTIASLQNHINTHTG   60 (189)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~~   60 (189)
                      +||+|+.|.....+.++|..|..+.++
T Consensus         1 kpy~cqyc~yrsadssnlkthiktkhs   27 (30)
T d1klra_           1 KTYQCQYCEFRSADSSNLKTHIKTKHS   27 (30)
T ss_dssp             CCCCCSSSSCCCSCSHHHHHHHHHHTS
T ss_pred             CCccccccccccccchhhhhhhhcccc
Confidence            467777777777777777777766443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=97.24  E-value=6.5e-05  Score=30.11  Aligned_cols=22  Identities=41%  Similarity=0.955  Sum_probs=19.7

Q ss_pred             cccCccchhccCCchHHHHHHh
Q psy9067         163 PYACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~  184 (189)
                      ||+|+-|+..|-.+.+|..||.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            7899999999999999999974

>d1znfa_ g.37.1.1 (A:) XFIN, third domain {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: XFIN, third domain
species: Xenopus laevis [TaxId: 8355]

Probab=97.23  E-value=0.0001  Score=29.48  Aligned_cols=24  Identities=33%  Similarity=0.725  Sum_probs=20.7

Q ss_pred             ccCccCCccCCChHHHHHHHHHhh
Q psy9067         136 YQCAHCTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       136 ~~C~~C~~~f~~~~~l~~H~~~h~  159 (189)
                      |.|-.|.++|..++.|..|+++|.
T Consensus         1 ykcglcersfveksalsrhqrvhk   24 (26)
T d1znfa_           1 YKCGLCERSFVEKSALSRHQRVHK   24 (26)
T ss_dssp             CBCSSSCCBCSSHHHHHHHGGGTC
T ss_pred             CcccchHHHHHHHHHHHHHHHhhc
Confidence            578889999999999999988873

>d2dmda1 g.37.1.1 (A:34-61) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=97.21  E-value=0.00012  Score=30.18  Aligned_cols=26  Identities=50%  Similarity=1.161  Sum_probs=14.7

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhh
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~  159 (189)
                      +|+.|..|..+-...++|..|+++|+
T Consensus         2 kp~kck~cdyaaadsssl~kh~rihs   27 (28)
T d2dmda1           2 KPYKCKTCDYAAADSSSLNKHLRIHS   27 (28)
T ss_dssp             CSEECSSSCCEESSHHHHHHHHHHSC
T ss_pred             CCcccccccchhcchhhHhhhhhccc
Confidence            45555555555555555555555553

>d2adra2 g.37.1.1 (A:131-161) ADR1 {Synthetic, based on Saccharomyces cerevisiae sequence}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: ADR1
species: Synthetic, based on Saccharomyces cerevisiae sequence

Probab=97.18  E-value=0.00012  Score=31.47  Aligned_cols=25  Identities=36%  Similarity=0.725  Sum_probs=17.8

Q ss_pred             CcccccCcccCCChhHHHhhhhhhc
Q psy9067          63 PHKCKYCESRFTTSGELVRHVRYKH   87 (189)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~h~~~~h   87 (189)
                      ||.|.+|++.|..+..|.+|+...|
T Consensus         1 Pf~C~~C~R~FaRrDLlLRH~qKlH   25 (31)
T d2adra2           1 PYPCGLCNRAFTRRDLLIRHAQKIH   25 (31)
T ss_dssp             SEECTTTCCEESSHHHHHHHHTTTS
T ss_pred             CcccccccchhhHHHHHHHHHHHHh
Confidence            5677777777777777777776533

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.02  E-value=0.00018  Score=30.15  Aligned_cols=26  Identities=38%  Similarity=0.787  Sum_probs=17.7

Q ss_pred             cccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         163 PYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       163 ~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      ||-|..  |.++|.+...|.+|..+|+|
T Consensus         2 pfpc~~egc~kgf~tlhhltrhs~thtg   29 (30)
T d1tf3a2           2 PFPCKEEGCEKGFTSLHHLTRHSLTHTG   29 (30)
T ss_dssp             SEECCCSSCCCEESSTTHHHHHHHHHHT
T ss_pred             CcCcccccccccchhhhhhhhhhccccC
Confidence            555644  77777777777777777765

>d2j7ja2 g.37.1.1 (A:29-57) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=97.00  E-value=0.00029  Score=29.33  Aligned_cols=25  Identities=40%  Similarity=0.826  Sum_probs=16.8

Q ss_pred             CCccCcc--CCccCCChHHHHHHHHHh
Q psy9067         134 RPYQCAH--CTYASPDTFKLKRHLRIH  158 (189)
Q Consensus       134 ~~~~C~~--C~~~f~~~~~l~~H~~~h  158 (189)
                      .||.|+.  |++.|...+.|.+|.++|
T Consensus         2 ~py~c~hegcdk~fs~ps~lkrhekvh   28 (29)
T d2j7ja2           2 LPYECPHEGCDKRFSLPSRLKRHEKVH   28 (29)
T ss_dssp             CCEECCSTTCCCEESSHHHHHHHHHHH
T ss_pred             CCccCCccCccccccCHHHHhhhhhcc
Confidence            3566643  777777777777776665

>d2glia4 g.37.1.1 (A:198-228) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.95  E-value=0.00011  Score=31.57  Aligned_cols=27  Identities=33%  Similarity=0.771  Sum_probs=15.4

Q ss_pred             CCccCcc--CCccCCChHHHHHHH-HHhhC
Q psy9067         134 RPYQCAH--CTYASPDTFKLKRHL-RIHTG  160 (189)
Q Consensus       134 ~~~~C~~--C~~~f~~~~~l~~H~-~~h~~  160 (189)
                      +||.|+.  |.++|+..+.--.|+ ++|..
T Consensus         1 kPY~C~~~gC~KafsNsSDraKHqnRTHs~   30 (31)
T d2glia4           1 KPYMCEHEGCSKAFSNASDRAKHQNRTHSN   30 (31)
T ss_dssp             CCEECCSTTCCCEESSSSTTHHHHHHTTCS
T ss_pred             CCccccCCChhhhhcchhhhhhhccccccC
Confidence            3566644  666666666666664 55543

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00034  Score=28.88  Aligned_cols=25  Identities=28%  Similarity=0.575  Sum_probs=19.7

Q ss_pred             cccCccchhccCCchHHHHHHhhhC
Q psy9067         163 PYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      |-+|+.|+++.+++..|..|-++|-
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            5678888888888888888887773

>d1bhia_ g.37.1.1 (A:) Transactivation domain of cre-bp1/atf-2 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transactivation domain of cre-bp1/atf-2
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.87  E-value=0.00045  Score=31.40  Aligned_cols=27  Identities=37%  Similarity=0.845  Sum_probs=21.1

Q ss_pred             CCCcccCcc--chhccCCchHHHHHHhhh
Q psy9067         160 GEKPYACDI--CHARFTQSNSLKSHRLIH  186 (189)
Q Consensus       160 ~~~~~~C~~--C~~~f~~~~~l~~H~~~h  186 (189)
                      +++||.|+.  |+.+|.+...|..|.+.|
T Consensus         3 ddkPF~C~~pGC~q~F~neDhL~vHk~KH   31 (38)
T d1bhia_           3 DDKPFLCTAPGCGQRFTNEDHLAVHKHKH   31 (38)
T ss_dssp             TCCCEECCCTTTCCEESSHHHHHHHHHHH
T ss_pred             CCCceecCCCCccccccchHHHHHhhhhh
Confidence            478888855  888888888888887665

>d1tf3a2 g.37.1.1 (A:41-70) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=96.83  E-value=0.00047  Score=28.82  Aligned_cols=28  Identities=36%  Similarity=0.718  Sum_probs=23.2

Q ss_pred             CCccCc--cCCccCCChHHHHHHHHHhhCC
Q psy9067         134 RPYQCA--HCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       134 ~~~~C~--~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      +||.|.  .|.+.|.+.-.|.+|..+|+++
T Consensus         1 ~pfpc~~egc~kgf~tlhhltrhs~thtge   30 (30)
T d1tf3a2           1 KPFPCKEEGCEKGFTSLHHLTRHSLTHTGE   30 (30)
T ss_dssp             CSEECCCSSCCCEESSTTHHHHHHHHHHTC
T ss_pred             CCcCcccccccccchhhhhhhhhhccccCC
Confidence            477774  5999999999999999888875

>d1x5wa2 g.37.1.1 (A:36-64) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.56  E-value=0.00072  Score=28.27  Aligned_cols=23  Identities=30%  Similarity=0.767  Sum_probs=12.1

Q ss_pred             CcccccCcccCCChhHHHhhhhh
Q psy9067          63 PHKCKYCESRFTTSGELVRHVRY   85 (189)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~h~~~   85 (189)
                      ||+|..|.-.-...++|..|++.
T Consensus         2 PFkC~~CsFDtkq~SnL~kH~kk   24 (29)
T d1x5wa2           2 PFKCNYCSFDTKQPSNLSKHMKK   24 (29)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHH
T ss_pred             CcccceecccccCcchHHHHHHH
Confidence            45555555555555555555543

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.52  E-value=0.001  Score=29.11  Aligned_cols=26  Identities=23%  Similarity=0.507  Sum_probs=16.8

Q ss_pred             cccCccchhccCCchHHHHHHhhhCC
Q psy9067         163 PYACDICHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~~h~~  188 (189)
                      .|.|+.||+.|..+..+.+|...-.|
T Consensus         4 afvcskcgktftrrntm~rha~nc~g   29 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADNCAG   29 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHHCCC
T ss_pred             eeeecccccchhcchHHHHHhhhcCC
Confidence            46677777777777777776654443

>d2dlqa1 g.37.1.1 (A:93-118) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.51  E-value=0.00083  Score=26.78  Aligned_cols=22  Identities=32%  Similarity=0.717  Sum_probs=12.3

Q ss_pred             CcccccCcccCCChhHHHhhhh
Q psy9067          63 PHKCKYCESRFTTSGELVRHVR   84 (189)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~h~~   84 (189)
                      ||+|..|...|-.+.+|..|+.
T Consensus         2 pykcsscsqqfmqkkdlqshmi   23 (26)
T d2dlqa1           2 PYKCSSCSQQFMQKKDLQSHMI   23 (26)
T ss_dssp             SEECSSSCCEESSHHHHHHHHH
T ss_pred             CCcccHHHHHHHHHHHHHHHHH
Confidence            4555555555555555555543

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.49  E-value=0.0008  Score=27.64  Aligned_cols=25  Identities=16%  Similarity=0.397  Sum_probs=19.8

Q ss_pred             cccCccchhccCCchHHHHHHhhhC
Q psy9067         163 PYACDICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~~h~  187 (189)
                      .|.|+.|+.....+++|..|++.-|
T Consensus         2 k~qcphc~tiiarksdlrvhlrnlh   26 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQH   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHTS
T ss_pred             CccCCcchhheeehhhhhHHhhhcc
Confidence            3678888888888888888887544

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.42  E-value=0.00079  Score=27.55  Aligned_cols=21  Identities=24%  Similarity=0.694  Sum_probs=16.8

Q ss_pred             cccCccchhccCCchHHHHHH
Q psy9067         163 PYACDICHARFTQSNSLKSHR  183 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~  183 (189)
                      ||+|+.||+.+-.+.+|..|-
T Consensus         1 pf~c~kcgkcyfrkenllehe   21 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHE   21 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHH
Confidence            678888888888888887773

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.28  E-value=0.0016  Score=28.90  Aligned_cols=22  Identities=32%  Similarity=0.378  Sum_probs=15.6

Q ss_pred             cCCccCCChHHHHHHHHHhhCC
Q psy9067         140 HCTYASPDTFKLKRHLRIHTGE  161 (189)
Q Consensus       140 ~C~~~f~~~~~l~~H~~~h~~~  161 (189)
                      --++.|...+.|..|+++|++|
T Consensus        12 R~~~pf~a~YkLv~H~R~HTgE   33 (33)
T d2glia2          12 RELRPFKAQYMLVVHMRRHTGE   33 (33)
T ss_dssp             TTTCCCSSHHHHHHHTHHHHCC
T ss_pred             CCCCcchhHHHHHHHHhhcCCC
Confidence            3356677777888888877764

>d1ubdc1 g.37.1.1 (C:295-322) Ying-yang 1 (yy1, zinc finger domain) {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Ying-yang 1 (yy1, zinc finger domain)
species: Human (Homo sapiens) [TaxId: 9606]

Probab=96.21  E-value=0.0017  Score=26.84  Aligned_cols=20  Identities=25%  Similarity=0.652  Sum_probs=15.3

Q ss_pred             chhccCCchHHHHHHhhhCC
Q psy9067         169 CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       169 C~~~f~~~~~l~~H~~~h~~  188 (189)
                      |++.|...+.+.+|+.+|-|
T Consensus         9 C~K~Frd~saMRKHlhtHGP   28 (28)
T d1ubdc1           9 CTKMFRDNSAMRKHLHTHGP   28 (28)
T ss_dssp             CCCEESSHHHHHHHHGGGSC
T ss_pred             HHHHhhchHHHHHHhhccCC
Confidence            77888888888888877754

>d2dlqa2 g.37.1.1 (A:35-62) GLI-Krueppel family member HKR3 {Mouse (Mus musculus) [TaxId: 10090]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GLI-Krueppel family member HKR3
species: Mouse (Mus musculus) [TaxId: 10090]

Probab=96.19  E-value=0.0025  Score=26.01  Aligned_cols=22  Identities=23%  Similarity=0.561  Sum_probs=14.4

Q ss_pred             cccCCCCCccccchhhHHHHHh
Q psy9067          35 PHKCSVCERGFKTIASLQNHIN   56 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~   56 (189)
                      ||+|..||+.+..+.+|.+|..
T Consensus         1 pf~c~kcgkcyfrkenllehea   22 (28)
T d2dlqa2           1 PFECPKCGKCYFRKENLLEHEA   22 (28)
T ss_dssp             SCBCTTTCCBCSSHHHHHHHHH
T ss_pred             CCccccchhhhhhHhHHHHHHH
Confidence            4666667776666666666654

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=96.07  E-value=0.0018  Score=25.90  Aligned_cols=22  Identities=32%  Similarity=0.839  Sum_probs=12.7

Q ss_pred             ccCccchhccCCchHHHHHHhh
Q psy9067         164 YACDICHARFTQSNSLKSHRLI  185 (189)
Q Consensus       164 ~~C~~C~~~f~~~~~l~~H~~~  185 (189)
                      |-|+.|-+.|..+.++..|.++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            4456666666666666666543

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=95.90  E-value=0.0016  Score=28.19  Aligned_cols=23  Identities=22%  Similarity=0.592  Sum_probs=19.6

Q ss_pred             CcccCccchhccCCchHHHHHHh
Q psy9067         162 KPYACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~~  184 (189)
                      ..|.|+-||..|++.+.|..|+.
T Consensus         7 arf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           7 ARFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCCBCTTTCCBCSCHHHHHHHTT
T ss_pred             cceeccccceeecChhHHHhhhh
Confidence            45889999999999999999875

>d2drpa2 g.37.1.1 (A:140-165) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=95.72  E-value=0.0034  Score=25.04  Aligned_cols=22  Identities=27%  Similarity=0.686  Sum_probs=11.7

Q ss_pred             cccccCcccCCChhHHHhhhhh
Q psy9067          64 HKCKYCESRFTTSGELVRHVRY   85 (189)
Q Consensus        64 ~~C~~C~~~f~~~~~l~~h~~~   85 (189)
                      |.|+.|-+.|..+.++..|+++
T Consensus         2 ypcp~cfkeftrkdnm~ahvki   23 (26)
T d2drpa2           2 YPCPFCFKEFTRKDNMTAHVKI   23 (26)
T ss_dssp             EECTTTCCEESCHHHHHHHHHH
T ss_pred             cCCchhhHHhccccCceEEEEE
Confidence            3455555555555555555543

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.69  E-value=0.0034  Score=29.90  Aligned_cols=26  Identities=23%  Similarity=0.483  Sum_probs=20.6

Q ss_pred             CcccCCCCCccccchhhHHHHHhhcC
Q psy9067          34 RPHKCSVCERGFKTIASLQNHINTHT   59 (189)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~~   59 (189)
                      ..|.|..|++.|.+...|.+|...|.
T Consensus         5 ~l~pCG~CgK~Ftd~~rLr~HEAQHG   30 (53)
T d2eppa1           5 GILPCGLCGKVFTDANRLRQHEAQHG   30 (53)
T ss_dssp             CCCCCTTTCCCCSCHHHHHHHHHHHT
T ss_pred             ceeeccccccccCCHHHHhHhHHhcC
Confidence            35778888888888888888877763

>d1x5wa1 g.37.1.1 (A:8-35) Zinc finger protein 64, ZFP68 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 64, ZFP68
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.46  E-value=0.0051  Score=25.25  Aligned_cols=25  Identities=36%  Similarity=0.818  Sum_probs=19.3

Q ss_pred             CccCccCCccCCChHHHHHHHHHhh
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLRIHT  159 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~~h~  159 (189)
                      |-.|+.|..+.+++..|+.|.++|.
T Consensus         2 pekc~ecsyscsskaalrvh~rihc   26 (28)
T d1x5wa1           2 PEKCSECSYSCSSKAALRIHERIHC   26 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHGGGC
T ss_pred             CccCcccccccCcHHHHHHhhcccc
Confidence            4578888888888888888887773

>d2ct1a1 g.37.1.1 (A:44-71) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.32  E-value=0.0098  Score=24.28  Aligned_cols=24  Identities=17%  Similarity=0.440  Sum_probs=18.1

Q ss_pred             cccCCCCCccccchhhHHHHHhhc
Q psy9067          35 PHKCSVCERGFKTIASLQNHINTH   58 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~   58 (189)
                      .|+|+.|+.....++.|..|++.-
T Consensus         2 k~qcphc~tiiarksdlrvhlrnl   25 (28)
T d2ct1a1           2 KFHCPHCDTVIARKSDLGVHLRKQ   25 (28)
T ss_dssp             SEECSSSSCEESSHHHHHHHHHHT
T ss_pred             CccCCcchhheeehhhhhHHhhhc
Confidence            367888888888888888887754

>d1tf3a1 g.37.1.1 (A:1-40) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=95.29  E-value=0.0044  Score=26.25  Aligned_cols=27  Identities=33%  Similarity=0.640  Sum_probs=21.0

Q ss_pred             CcccCcc--chhccCCchHHHHHHhhhCC
Q psy9067         162 KPYACDI--CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       162 ~~~~C~~--C~~~f~~~~~l~~H~~~h~~  188 (189)
                      +.|.|+.  |+..|+..+.|..|+=.|+|
T Consensus         2 k~~iCsf~dC~A~ynk~wkL~AHLckHTG   30 (31)
T d1tf3a1           2 KRYICSFADCGAAYNKNWKLQAHLSKHTG   30 (31)
T ss_dssp             CCEECSSGGGCCEESSHHHHHHHHHHHHC
T ss_pred             CceEeeCCCcchhhccchhhhHHhhhhcC
Confidence            4577754  88888888888888877766

>d2glia2 g.37.1.1 (A:135-167) Five-finger GLI1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Five-finger GLI1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=95.02  E-value=0.004  Score=27.54  Aligned_cols=20  Identities=25%  Similarity=0.099  Sum_probs=17.4

Q ss_pred             chhccCCchHHHHHHhhhCC
Q psy9067         169 CHARFTQSNSLKSHRLIHTP  188 (189)
Q Consensus       169 C~~~f~~~~~l~~H~~~h~~  188 (189)
                      =++.|+.+..|..|||+|+|
T Consensus        13 ~~~pf~a~YkLv~H~R~HTg   32 (33)
T d2glia2          13 ELRPFKAQYMLVVHMRRHTG   32 (33)
T ss_dssp             TTCCCSSHHHHHHHTHHHHC
T ss_pred             CCCcchhHHHHHHHHhhcCC
Confidence            35679999999999999987

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=94.94  E-value=0.0084  Score=28.42  Aligned_cols=24  Identities=29%  Similarity=0.638  Sum_probs=11.4

Q ss_pred             CCccCccCCccCCChHHHHHHHHH
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRI  157 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~  157 (189)
                      .|-.|++|+....++-.|+.|+..
T Consensus        23 qpatcpic~avirqsrnlrrhlel   46 (54)
T d1yuja_          23 QPATCPICYAVIRQSRNLRRHLEL   46 (54)
T ss_dssp             CCEECTTTCCEESSHHHHHHHHHH
T ss_pred             CCCCCchHHHHHHHHHHHHHHHHH
Confidence            444444444444444444444443

>d2j7ja1 g.37.1.1 (A:1-28) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=94.39  E-value=0.0087  Score=24.25  Aligned_cols=19  Identities=42%  Similarity=0.770  Sum_probs=11.5

Q ss_pred             chhccCCchHHHHHHhhhC
Q psy9067         169 CHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       169 C~~~f~~~~~l~~H~~~h~  187 (189)
                      |+++|..-..|..|+-+|+
T Consensus         9 c~kafkkhnqlkvhqf~ht   27 (28)
T d2j7ja1           9 CGKAFKKHNQLKVHQFSHT   27 (28)
T ss_dssp             CCCEESSHHHHHHHHHHHH
T ss_pred             chHHHhhccceEEEeeccc
Confidence            6666666666666665553

>d1vd4a_ g.41.3.1 (A:) Transcription initiation factor TFIIE-alpha {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Zinc beta-ribbon
family: Transcriptional factor domain
domain: Transcription initiation factor TFIIE-alpha
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.29  E-value=0.012  Score=30.27  Aligned_cols=37  Identities=22%  Similarity=0.592  Sum_probs=26.1

Q ss_pred             CCcccCCCCCccccchhhHHHHHhhcCCCCCcccccCccc
Q psy9067          33 ERPHKCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESR   72 (189)
Q Consensus        33 ~~~~~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~   72 (189)
                      ...|.|+.|++.|   +.|..-...-.....|.|..|+-.
T Consensus        12 ~~~y~Cp~C~~~y---s~Lda~~L~d~~~~~F~C~~C~~e   48 (62)
T d1vd4a_          12 RASFKCPVCSSTF---TDLEANQLFDPMTGTFRCTFCHTE   48 (62)
T ss_dssp             SSEEECSSSCCEE---EHHHHHHHEETTTTEEBCSSSCCB
T ss_pred             CCceECCCCCCCc---chhhHHHhcCcCCCeEEecCCCCE
Confidence            3458899999998   555554445555667899998765

>d1x6ha1 g.37.1.1 (A:44-80) Transcriptional repressor CTCF {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcriptional repressor CTCF
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.25  E-value=0.011  Score=25.79  Aligned_cols=23  Identities=26%  Similarity=0.580  Sum_probs=20.0

Q ss_pred             CcccccCcccCCChhHHHhhhhh
Q psy9067          63 PHKCKYCESRFTTSGELVRHVRY   85 (189)
Q Consensus        63 ~~~C~~C~~~f~~~~~l~~h~~~   85 (189)
                      .|.|..|++.|..+..+.+|...
T Consensus         4 afvcskcgktftrrntm~rha~n   26 (37)
T d1x6ha1           4 AFVCSKCGKTFTRRNTMARHADN   26 (37)
T ss_dssp             CEECSSSCCEESCHHHHHHHHHH
T ss_pred             eeeecccccchhcchHHHHHhhh
Confidence            58899999999999999998753

>d2eppa1 g.37.1.1 (A:286-338) PATZ1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: PATZ1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.09  E-value=0.025  Score=26.84  Aligned_cols=24  Identities=25%  Similarity=0.457  Sum_probs=18.2

Q ss_pred             CccCccCCccCCChHHHHHHHHHh
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLRIH  158 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~~h  158 (189)
                      .|.|-.|+++|.....|+.|...|
T Consensus         6 l~pCG~CgK~Ftd~~rLr~HEAQH   29 (53)
T d2eppa1           6 ILPCGLCGKVFTDANRLRQHEAQH   29 (53)
T ss_dssp             CCCCTTTCCCCSCHHHHHHHHHHH
T ss_pred             eeeccccccccCCHHHHhHhHHhc
Confidence            467788888888888888886665

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=94.00  E-value=0.054  Score=22.37  Aligned_cols=19  Identities=26%  Similarity=0.520  Sum_probs=8.0

Q ss_pred             cCccCCccCCChHHHHHHH
Q psy9067         137 QCAHCTYASPDTFKLKRHL  155 (189)
Q Consensus       137 ~C~~C~~~f~~~~~l~~H~  155 (189)
                      .|..||+...+...+.-|+
T Consensus         4 tc~hcgkqlks~~gmkyhv   22 (30)
T d2ctda2           4 TCHHCGKQLRSLAGMKYHV   22 (30)
T ss_dssp             CCSSSCCCCSSHHHHHHHH
T ss_pred             echhHHHHHhhccCceEEE
Confidence            3444444444444444443

>d1y0jb1 g.37.1.2 (B:1-36) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=93.53  E-value=0.033  Score=23.95  Aligned_cols=22  Identities=23%  Similarity=0.483  Sum_probs=13.2

Q ss_pred             cccCCCCCccccchhhHHHHHh
Q psy9067          35 PHKCSVCERGFKTIASLQNHIN   56 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~   56 (189)
                      .|.|+-||..|++.+.|..|+.
T Consensus         8 rf~c~pcgirfss~stleahqt   29 (36)
T d1y0jb1           8 RFMCLPCGIAFSSPSTLEAHQA   29 (36)
T ss_dssp             CCBCTTTCCBCSCHHHHHHHTT
T ss_pred             ceeccccceeecChhHHHhhhh
Confidence            3556666666666666666654

>d2ctda2 g.37.1.1 (A:61-90) Zinc finger protein 512, ZNF512 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 512, ZNF512
species: Human (Homo sapiens) [TaxId: 9606]

Probab=92.99  E-value=0.068  Score=22.05  Aligned_cols=27  Identities=19%  Similarity=0.374  Sum_probs=22.5

Q ss_pred             CccCCCCCccccchHHHHhchhhcCCC
Q psy9067         107 PHKCSICDYASVELSKMRNHMRSHTGE  133 (189)
Q Consensus       107 ~~~C~~C~~~~~~~~~l~~H~~~~~~~  133 (189)
                      .|.|..||+..++.....-|....+..
T Consensus         2 ~ftc~hcgkqlks~~gmkyhvmadhn~   28 (30)
T d2ctda2           2 MFTCHHCGKQLRSLAGMKYHVMANHNS   28 (30)
T ss_dssp             CCCCSSSCCCCSSHHHHHHHHHHHTCC
T ss_pred             ceechhHHHHHhhccCceEEEeecccC
Confidence            478999999999999999887765544

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.98  E-value=0.024  Score=24.76  Aligned_cols=22  Identities=23%  Similarity=0.662  Sum_probs=13.5

Q ss_pred             CcccCccchhccCCchHHHHHH
Q psy9067         162 KPYACDICHARFTQSNSLKSHR  183 (189)
Q Consensus       162 ~~~~C~~C~~~f~~~~~l~~H~  183 (189)
                      ..|.|.+|.+.+..-+++.+|.
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHy   28 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHY   28 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHH
T ss_pred             cEEEeehhhHHHHHHHHHHHHH
Confidence            3466666666666666666664

>d1yuja_ g.37.1.1 (A:) GAGA factor {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: GAGA factor
species: Drosophila melanogaster [TaxId: 7227]

Probab=92.36  E-value=0.084  Score=24.88  Aligned_cols=25  Identities=20%  Similarity=0.581  Sum_probs=13.7

Q ss_pred             cccCCCCCccccchhhHHHHHhhcC
Q psy9067          35 PHKCSVCERGFKTIASLQNHINTHT   59 (189)
Q Consensus        35 ~~~C~~C~~~f~~~~~l~~H~~~~~   59 (189)
                      |-.|++|+-..+...+|..|+...+
T Consensus        24 patcpic~avirqsrnlrrhlel~h   48 (54)
T d1yuja_          24 PATCPICYAVIRQSRNLRRHLELRH   48 (54)
T ss_dssp             CEECTTTCCEESSHHHHHHHHHHHT
T ss_pred             CCCCchHHHHHHHHHHHHHHHHHHh
Confidence            4455555555555555555555443

>d1yuza2 g.41.5.1 (A:167-202) Nigerythrin, C-terminal domain {Desulfovibrio vulgaris [TaxId: 881]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Nigerythrin, C-terminal domain
species: Desulfovibrio vulgaris [TaxId: 881]

Probab=92.20  E-value=0.018  Score=26.07  Aligned_cols=26  Identities=35%  Similarity=0.727  Sum_probs=15.7

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhc
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHAR  172 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  172 (189)
                      +.|.|++||..             +.++.|-+|++||..
T Consensus         4 ~~~vC~vCGyi-------------~~g~~Pe~CPvCg~~   29 (36)
T d1yuza2           4 KFHLCPICGYI-------------HKGEDFEKCPICFRP   29 (36)
T ss_dssp             CEEECSSSCCE-------------EESSCCSBCTTTCCB
T ss_pred             CEEECCCCCCE-------------eeCCCCCcCCCCCCc
Confidence            45677777743             234566677777643

>d1nnqa2 g.41.5.1 (A:135-171) Rubrerythrin, C-terminal domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Rubredoxin-like
family: Rubredoxin
domain: Rubrerythrin, C-terminal domain
species: Archaeon Pyrococcus furiosus [TaxId: 2261]

Probab=92.14  E-value=0.017  Score=26.40  Aligned_cols=26  Identities=35%  Similarity=0.869  Sum_probs=15.8

Q ss_pred             CCccCccCCccCCChHHHHHHHHHhhCCCcccCccchhc
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLRIHTGEKPYACDICHAR  172 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~~h~~~~~~~C~~C~~~  172 (189)
                      +.|.|++||..+             .++.|-.|++||..
T Consensus         4 ~~~~C~vCG~i~-------------~g~~P~~CPvCg~~   29 (37)
T d1nnqa2           4 KVYICPICGYTA-------------VDEAPEYCPVCGAP   29 (37)
T ss_dssp             CEEECTTTCCEE-------------ESCCCSBCTTTCCB
T ss_pred             cEEECCCCCCEe-------------cCCCCCcCCCCCCc
Confidence            456777777442             34566777777643

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.87  E-value=0.015  Score=30.43  Aligned_cols=23  Identities=30%  Similarity=0.475  Sum_probs=16.0

Q ss_pred             CCccCccCCccCCChHHHHHHHH
Q psy9067         134 RPYQCAHCTYASPDTFKLKRHLR  156 (189)
Q Consensus       134 ~~~~C~~C~~~f~~~~~l~~H~~  156 (189)
                      ..|.|..|++.|.+...|..|.+
T Consensus        14 gqfYCv~C~K~F~se~~l~~H~k   36 (67)
T d1zr9a1          14 GLHRCLACARYFIDSTNLKTHFR   36 (67)
T ss_dssp             GCSEETTTTEECSSHHHHHHHTT
T ss_pred             CEEecccccCccCCHHHHHHHHc
Confidence            44677777777777777777754

>d2dlka1 g.37.1.1 (A:8-37) Zinc finger protein 692, ZNF692 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 692, ZNF692
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.72  E-value=0.041  Score=22.66  Aligned_cols=16  Identities=25%  Similarity=0.544  Sum_probs=8.9

Q ss_pred             chhccCCchHHHHHHh
Q psy9067         169 CHARFTQSNSLKSHRL  184 (189)
Q Consensus       169 C~~~f~~~~~l~~H~~  184 (189)
                      ||+.|++++.|..|.+
T Consensus         8 c~kifsnrqylnhh~k   23 (30)
T d2dlka1           8 CGRIFSNRQYLNHHKK   23 (30)
T ss_dssp             TCCEESSHHHHHHHHH
T ss_pred             chhhhccHHHHHhHHH
Confidence            5555555555555544

>d1zr9a1 g.37.1.4 (A:28-94) Zinc finger protein 593, ZNF593 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: HkH motif-containing C2H2 finger
domain: Zinc finger protein 593, ZNF593
species: Human (Homo sapiens) [TaxId: 9606]

Probab=91.46  E-value=0.023  Score=29.76  Aligned_cols=23  Identities=30%  Similarity=0.411  Sum_probs=21.0

Q ss_pred             cccCccchhccCCchHHHHHHhh
Q psy9067         163 PYACDICHARFTQSNSLKSHRLI  185 (189)
Q Consensus       163 ~~~C~~C~~~f~~~~~l~~H~~~  185 (189)
                      .|-|..|++.|.+...|..|+++
T Consensus        15 qfYCv~C~K~F~se~~l~~H~ks   37 (67)
T d1zr9a1          15 LHRCLACARYFIDSTNLKTHFRS   37 (67)
T ss_dssp             CSEETTTTEECSSHHHHHHHTTC
T ss_pred             EEecccccCccCCHHHHHHHHcc
Confidence            58999999999999999999865

>d2drpa1 g.37.1.1 (A:103-139) Tramtrack protein (two zinc-finger peptide) {Drosophila melanogaster [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Tramtrack protein (two zinc-finger peptide)
species: Drosophila melanogaster [TaxId: 7227]

Probab=90.54  E-value=0.1  Score=22.69  Aligned_cols=25  Identities=28%  Similarity=0.607  Sum_probs=15.9

Q ss_pred             CcccCCCCCccccchhhHHHHHhhc
Q psy9067          34 RPHKCSVCERGFKTIASLQNHINTH   58 (189)
Q Consensus        34 ~~~~C~~C~~~f~~~~~l~~H~~~~   58 (189)
                      ..|.|..|.+.+...+++-+|..+.
T Consensus         7 ~~yRC~~C~r~YTHISNFCRHyvtS   31 (37)
T d2drpa1           7 HTYRCKVCSRVYTHISNFCRHYVTS   31 (37)
T ss_dssp             TEEECTTTCCEESSHHHHHHHHHHH
T ss_pred             cEEEeehhhHHHHHHHHHHHHHHhh
Confidence            3466677777776666666666553

>d2ak3a2 g.41.2.1 (A:125-161) Microbial and mitochondrial ADK, insert "zinc finger" domain {Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Cow (Bos taurus), mitochondrial izozyme-3 [TaxId: 9913]

Probab=89.68  E-value=0.057  Score=24.55  Aligned_cols=29  Identities=7%  Similarity=-0.079  Sum_probs=13.9

Q ss_pred             cCCCCCccccchhhHHHHHhhcCCCCCcccccCcccC
Q psy9067          37 KCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRF   73 (189)
Q Consensus        37 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f   73 (189)
                      .|+.||..|        |.........-.|+.|+..+
T Consensus         4 vc~~cG~~Y--------h~~~~pPk~~g~CD~cg~~L   32 (37)
T d2ak3a2           4 IHPGSGRVY--------NIEFNPPKTMGIDDLTGEPL   32 (37)
T ss_dssp             EETTTTEEE--------ETTTBCCSSTTBCTTTCCBC
T ss_pred             eeCCcCChh--------hhccCCccccCCccCCCCcC
Confidence            455555555        23333344445555555443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=88.51  E-value=0.11  Score=26.43  Aligned_cols=23  Identities=43%  Similarity=0.792  Sum_probs=11.4

Q ss_pred             CccCccCCccCCChHHHHHHHHH
Q psy9067         135 PYQCAHCTYASPDTFKLKRHLRI  157 (189)
Q Consensus       135 ~~~C~~C~~~f~~~~~l~~H~~~  157 (189)
                      .|+|..|+..|.+...|..|+..
T Consensus        18 ~yQC~HCd~K~~s~~el~~hl~~   40 (75)
T d1x6fa1          18 TYQCKHCDSKLQSTAELTSHLNI   40 (75)
T ss_dssp             CEECSSSCCEESSHHHHHHHHHH
T ss_pred             eeeechhHHHHhhHHHHHHHHHh
Confidence            35555555555555555555443

>d1x6fa1 g.37.1.1 (A:8-82) Zinc finger protein 462, ZNF462 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Zinc finger protein 462, ZNF462
species: Human (Homo sapiens) [TaxId: 9606]

Probab=85.76  E-value=0.35  Score=24.50  Aligned_cols=29  Identities=17%  Similarity=0.445  Sum_probs=23.3

Q ss_pred             cCCCCCccCCCCCccccchHHHHhchhhc
Q psy9067         102 HTHEKPHKCSICDYASVELSKMRNHMRSH  130 (189)
Q Consensus       102 ~~~~~~~~C~~C~~~~~~~~~l~~H~~~~  130 (189)
                      ......|+|..|...|.+...|..|+..|
T Consensus        13 ~~~s~~yQC~HCd~K~~s~~el~~hl~~h   41 (75)
T d1x6fa1          13 RLQNSTYQCKHCDSKLQSTAELTSHLNIH   41 (75)
T ss_dssp             CCCCSCEECSSSCCEESSHHHHHHHHHHH
T ss_pred             ccCCceeeechhHHHHhhHHHHHHHHHhc
Confidence            34556789999999999999988888765

>d1fu9a_ g.37.1.2 (A:) U-shaped transcription factor, different fingers {Fruit fly (Drosophila melanogaster) [TaxId: 7227]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: C2HC finger
domain: U-shaped transcription factor, different fingers
species: Fruit fly (Drosophila melanogaster) [TaxId: 7227]

Probab=85.12  E-value=0.18  Score=22.20  Aligned_cols=20  Identities=20%  Similarity=0.556  Sum_probs=13.5

Q ss_pred             cCccchhccCCchHHHHHHh
Q psy9067         165 ACDICHARFTQSNSLKSHRL  184 (189)
Q Consensus       165 ~C~~C~~~f~~~~~l~~H~~  184 (189)
                      -|..|+..|++.+.+..|.+
T Consensus        10 YC~~CDI~Fn~~~T~~aHKk   29 (36)
T d1fu9a_          10 YCSTCDISFNYVKTYLAHKQ   29 (36)
T ss_dssp             EETTTTEECSSHHHHHHHHH
T ss_pred             HHhhCCceehhHHHHHHHHH
Confidence            46667777777777777754

>d1tf3a3 g.37.1.1 (A:71-101) Transcription factor IIIA, TFIIIA {Xenopus laevis [TaxId: 8355]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: Classic zinc finger, C2H2
domain: Transcription factor IIIA, TFIIIA
species: Xenopus laevis [TaxId: 8355]

Probab=85.06  E-value=0.42  Score=19.56  Aligned_cols=24  Identities=33%  Similarity=0.641  Sum_probs=16.2

Q ss_pred             ccCc--cchhccCCchHHHHHHhhhC
Q psy9067         164 YACD--ICHARFTQSNSLKSHRLIHT  187 (189)
Q Consensus       164 ~~C~--~C~~~f~~~~~l~~H~~~h~  187 (189)
                      |.|.  -|...|.++.++.+|..--|
T Consensus         3 f~cdsd~cdl~fttkanmkkhfnrfh   28 (31)
T d1tf3a3           3 FTCDSDGCDLRFTTKANMKKHFNRFH   28 (31)
T ss_dssp             EECSSSSCCCEESSHHHHHHHHHHHT
T ss_pred             ccccCCCcceEEeehHHHHHHHhhhc
Confidence            5563  37788888888888865433

>d1akya2 g.41.2.1 (A:131-168) Microbial and mitochondrial ADK, insert "zinc finger" domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}

class: Small proteins
fold: Rubredoxin-like
superfamily: Microbial and mitochondrial ADK, insert "zinc finger" domain
family: Microbial and mitochondrial ADK, insert "zinc finger" domain
domain: Microbial and mitochondrial ADK, insert "zinc finger" domain
species: Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]

Probab=84.68  E-value=0.19  Score=22.90  Aligned_cols=29  Identities=10%  Similarity=0.030  Sum_probs=14.0

Q ss_pred             cCCCCCccccchhhHHHHHhhcCCCCCcccccCcccC
Q psy9067          37 KCSVCERGFKTIASLQNHINTHTGVKPHKCKYCESRF   73 (189)
Q Consensus        37 ~C~~C~~~f~~~~~l~~H~~~~~~~~~~~C~~C~~~f   73 (189)
                      .|+.||..|        |.........-.|..|+..+
T Consensus         4 ~C~~cG~~Y--------h~~~~ppk~~g~CD~cg~~L   32 (38)
T d1akya2           4 IHPASGRSY--------HKIFNPPKEDMKDDVTGEAL   32 (38)
T ss_dssp             ECTTTCCEE--------ETTTBCCSSTTBCTTTCCBC
T ss_pred             CCcCccchh--------hhhccCcCcCCccCCCCCEe
Confidence            455566555        22333334445555555443

>d2gmga1 a.4.5.82 (A:1-105) Hypothetical protein PF0610 {Pyrococcus furiosus [TaxId: 2261]}

class: All alpha proteins
fold: DNA/RNA-binding 3-helical bundle
superfamily: "Winged helix" DNA-binding domain
family: PF0610-like
domain: Hypothetical protein PF0610
species: Pyrococcus furiosus [TaxId: 2261]

Probab=84.67  E-value=0.19  Score=28.56  Aligned_cols=26  Identities=23%  Similarity=0.645  Sum_probs=15.5

Q ss_pred             CccCCCCCccccchHHHHhchhhcCCCCCccCccCCc
Q psy9067         107 PHKCSICDYASVELSKMRNHMRSHTGERPYQCAHCTY  143 (189)
Q Consensus       107 ~~~C~~C~~~~~~~~~l~~H~~~~~~~~~~~C~~C~~  143 (189)
                      |-.|..||..|...           -.+|..||.|.-
T Consensus        67 Pp~CrkCGfvFr~~-----------~kkPSRCP~CKS   92 (105)
T d2gmga1          67 PAQCRKCGFVFKAE-----------INIPSRCPKCKS   92 (105)
T ss_dssp             CCBBTTTCCBCCCC-----------SSCCSSCSSSCC
T ss_pred             ChhhhhcCCeeccc-----------CCCCCCCCCCCC
Confidence            44677777776321           136677777753

>d2ct5a1 g.37.1.6 (A:8-67) Zinc finger BED domain-containing protein 1 {Human (Homo sapiens) [TaxId: 9606]}

class: Small proteins
fold: beta-beta-alpha zinc fingers
superfamily: beta-beta-alpha zinc fingers
family: BED zinc finger
domain: Zinc finger BED domain-containing protein 1
species: Human (Homo sapiens) [TaxId: 9606]

Probab=83.89  E-value=0.13  Score=25.73  Aligned_cols=27  Identities=26%  Similarity=0.472  Sum_probs=18.9

Q ss_pred             cccCccchhccC---CchHHHHHHhhhCCC
Q psy9067         163 PYACDICHARFT---QSNSLKSHRLIHTPL  189 (189)
Q Consensus       163 ~~~C~~C~~~f~---~~~~l~~H~~~h~~~  189 (189)
                      ...|.+|.+.++   +-++|..|++.+||+
T Consensus        22 ~i~C~lC~k~i~~~GNTtNl~~HL~~rHp~   51 (60)
T d2ct5a1          22 KIYCRICMAQIAYSGNTSNLSYHLEKNHPE   51 (60)
T ss_dssp             CCEETTTTEECCCCSSTHHHHHHHHHSCHH
T ss_pred             chHHHHHHHHhcccCCcchHHHHHHhcCHH
Confidence            345777776655   457789999888873